BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042977
(471 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/407 (39%), Positives = 236/407 (57%), Gaps = 18/407 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y + LG+G FG LC K TGQ+ A K I+KR++ K D E + REVQ++ L P
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HP 86
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI++L +EDK +LV E+ GGELFD II++ ++E AA ++R ++ I H
Sbjct: 87 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 146
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRKYGP 260
++HRDLKPEN LL +K +++ ++ DFGLS ++ + KD +G+AYYIAPEVL Y
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE 206
Query: 261 EADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKML 320
+ D+WS GV+LYILL G PPF +E+ I + +G F W +S AKDL++KML
Sbjct: 207 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 266
Query: 321 NSDPKQRLTATEVLAHPWIK---EDGEAPDVP-LDNAVLSRLKQFKAMNKFKKVALRVIA 376
P R++A + L H WI+ ++ + DVP LDNA+L+ ++QF+ K + AL +
Sbjct: 267 TYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQKLAQAALLYMG 325
Query: 377 GCL-SEEEIMGLKEMFKSIDTDNSGTITLEELKQG----LAKQGTKLS-------EYEAK 424
L S++E L +F +D + G + EL +G + +G S E+E
Sbjct: 326 SKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVD 385
Query: 425 QLMEAADADGNGTIDYHEFITATMHLNRMDREEHLYTAFQHFDKDNS 471
Q+++A D D NG I+Y EF+T M + E L AF+ FD DNS
Sbjct: 386 QVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNS 432
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTIDYHEF 443
L+ F+ D+DNSG I+ EL + K ++ D + +G +D+ EF
Sbjct: 420 LERAFRMFDSDNSGKISSTELATIFGVSDVDSETW--KSVLSEVDKNNDGEVDFDEF 474
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/407 (39%), Positives = 236/407 (57%), Gaps = 18/407 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y + LG+G FG LC K TGQ+ A K I+KR++ K D E + REVQ++ L P
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HP 109
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI++L +EDK +LV E+ GGELFD II++ ++E AA ++R ++ I H
Sbjct: 110 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 169
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRKYGP 260
++HRDLKPEN LL +K +++ ++ DFGLS ++ + KD +G+AYYIAPEVL Y
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE 229
Query: 261 EADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKML 320
+ D+WS GV+LYILL G PPF +E+ I + +G F W +S AKDL++KML
Sbjct: 230 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 289
Query: 321 NSDPKQRLTATEVLAHPWIK---EDGEAPDVP-LDNAVLSRLKQFKAMNKFKKVALRVIA 376
P R++A + L H WI+ ++ + DVP LDNA+L+ ++QF+ K + AL +
Sbjct: 290 TYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQKLAQAALLYMG 348
Query: 377 GCL-SEEEIMGLKEMFKSIDTDNSGTITLEELKQG----LAKQGTKLS-------EYEAK 424
L S++E L +F +D + G + EL +G + +G S E+E
Sbjct: 349 SKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVD 408
Query: 425 QLMEAADADGNGTIDYHEFITATMHLNRMDREEHLYTAFQHFDKDNS 471
Q+++A D D NG I+Y EF+T M + E L AF+ FD DNS
Sbjct: 409 QVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNS 455
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTIDYHEF 443
L+ F+ D+DNSG I+ EL + K ++ D + +G +D+ EF
Sbjct: 443 LERAFRMFDSDNSGKISSTELATIFGVSDVDSETW--KSVLSEVDKNNDGEVDFDEF 497
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 283 bits (724), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/407 (39%), Positives = 236/407 (57%), Gaps = 18/407 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y + LG+G FG LC K TGQ+ A K I+KR++ K D E + REVQ++ L P
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HP 110
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI++L +EDK +LV E+ GGELFD II++ ++E AA ++R ++ I H
Sbjct: 111 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 170
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRKYGP 260
++HRDLKPEN LL +K +++ ++ DFGLS ++ + KD +G+AYYIAPEVL Y
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE 230
Query: 261 EADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKML 320
+ D+WS GV+LYILL G PPF +E+ I + +G F W +S AKDL++KML
Sbjct: 231 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 290
Query: 321 NSDPKQRLTATEVLAHPWIK---EDGEAPDVP-LDNAVLSRLKQFKAMNKFKKVALRVIA 376
P R++A + L H WI+ ++ + DVP LDNA+L+ ++QF+ K + AL +
Sbjct: 291 TYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQKLAQAALLYMG 349
Query: 377 GCL-SEEEIMGLKEMFKSIDTDNSGTITLEELKQG----LAKQGTKLS-------EYEAK 424
L S++E L +F +D + G + EL +G + +G S E+E
Sbjct: 350 SKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVD 409
Query: 425 QLMEAADADGNGTIDYHEFITATMHLNRMDREEHLYTAFQHFDKDNS 471
Q+++A D D NG I+Y EF+T M + E L AF+ FD DNS
Sbjct: 410 QVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNS 456
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTIDYHEF 443
L+ F+ D+DNSG I+ EL + K ++ D + +G +D+ EF
Sbjct: 444 LERAFRMFDSDNSGKISSTELATIFGVSDVDSETW--KSVLSEVDKNNDGEVDFDEF 498
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 279 bits (713), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/405 (38%), Positives = 231/405 (57%), Gaps = 23/405 (5%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LG+G FG C + T Q++A K I K NK D + REV+++ L PNI++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKL-DHPNIMKLF 87
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRDL 206
ED S ++V EL GGELFD II + ++E AA +++ + I H ++HRDL
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 207 KPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRKYGPEADIWS 266
KPEN LL +K+++ +K DFGLS ++Q KD +G+AYYIAPEVL+ Y + D+WS
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWS 207
Query: 267 IGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSDPKQ 326
GV+LYILL G PPF+ ++E+ I + G F W +IS AKDL++KML P
Sbjct: 208 AGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSL 267
Query: 327 RLTATEVLAHPWI-KEDGEAP---DVPLDNAVLSRLKQFKAMNKFKKVALRVIAGCLSE- 381
R+TAT+ L HPWI K E P D+P + ++ ++QF+A K + AL +A L+
Sbjct: 268 RITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTL 327
Query: 382 EEIMGLKEMFKSIDTDNSGTITLEELKQG---------------LAKQGTKLSEYEAKQL 426
+E L E+F+ +DT+N G + +EL +G + +G+ + E + L
Sbjct: 328 DETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTI-EDQIDSL 386
Query: 427 MEAADADGNGTIDYHEFITATMHLNRMDREEHLYTAFQHFDKDNS 471
M D DG+G+I+Y EFI + + + E + AF+ FDKD S
Sbjct: 387 MPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGS 431
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 36/66 (54%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTIDYHEFITA 446
++ FK D D SG I+ +EL + ++ + + E + ++E D + +G +D++EF+
Sbjct: 419 MERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEM 478
Query: 447 TMHLNR 452
+ R
Sbjct: 479 LQNFVR 484
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 275 bits (702), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 158/407 (38%), Positives = 231/407 (56%), Gaps = 18/407 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y + LG+G FG LC K TGQ+ A K I+KR++ K D E + REVQ++ L P
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HP 86
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI +L +EDK +LV E+ GGELFD II++ ++E AA ++R ++ I H
Sbjct: 87 NIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNK 146
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRKYGP 260
++HRDLKPEN LL +K +++ ++ DFGLS ++ + KD +G+AYYIAPEVL Y
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDE 206
Query: 261 EADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKML 320
+ D+WS GV+LYILL G PPF +E+ I + +G F W +S AKDL++K L
Sbjct: 207 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXL 266
Query: 321 NSDPKQRLTATEVLAHPWIK---EDGEAPDVP-LDNAVLSRLKQFKAMNKFKKVALRVIA 376
P R++A + L H WI+ ++ + DVP LDNA+L+ ++QF+ K + AL
Sbjct: 267 TYVPSXRISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQKLAQAALLYXG 325
Query: 377 GCL-SEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAK----QGTKLS-------EYEAK 424
L S++E L +F D + G + EL +G + +G S E+E
Sbjct: 326 SKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVD 385
Query: 425 QLMEAADADGNGTIDYHEFITATMHLNRMDREEHLYTAFQHFDKDNS 471
Q+++A D D NG I+Y EF+T + E L AF+ FD DNS
Sbjct: 386 QVLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNS 432
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTIDYHEFITA 446
L+ F+ D+DNSG I+ EL + K ++ D + +G +D+ EF
Sbjct: 420 LERAFRXFDSDNSGKISSTELATIFGVSDVDSETW--KSVLSEVDKNNDGEVDFDEFQQX 477
Query: 447 TMHL 450
+ L
Sbjct: 478 LLKL 481
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 150/404 (37%), Positives = 234/404 (57%), Gaps = 15/404 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K+LG G +G LC K T + A K I K V+ + EV ++ L P
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTS-VSTSSNSKLLEEVAVLK-LLDHP 96
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI++L +EDK++ +LVME GGELFD II + + E AA +++ ++ + H
Sbjct: 97 NIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN 156
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRKYGP 260
++HRDLKPEN LL +K++++ +K DFGLS ++ + K+ +G+AYYIAPEVL++KY
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDE 216
Query: 261 EADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKML 320
+ D+WSIGV+L+ILL G PPF +++ I + +G F S W ++S AKDL+K+ML
Sbjct: 217 KCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQML 276
Query: 321 NSDPKQRLTATEVLAHPWIKE----DGEAPDVPLDNAVLSRLKQFKAMNKFKKVALRVIA 376
D ++R++A + L HPWIKE ++P + +++F+ K + AL +A
Sbjct: 277 QFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMA 336
Query: 377 GCL-SEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAK-QGTKLS-------EYEAKQLM 427
L S+EE L ++F+ ID + G + +EL G +K G +++ E E ++
Sbjct: 337 SKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAIL 396
Query: 428 EAADADGNGTIDYHEFITATMHLNRMDREEHLYTAFQHFDKDNS 471
AAD D NG IDY EF+T M + ++ L +AFQ FD+D +
Sbjct: 397 GAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGN 440
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTIDYHEF 443
L+ F+ D D +G I+++EL L K+++ D++ +G +D+ EF
Sbjct: 428 LESAFQKFDQDGNGKISVDELASVFGLD--HLESKTWKEMISGIDSNNDGDVDFEEF 482
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 264 bits (675), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 146/407 (35%), Positives = 226/407 (55%), Gaps = 17/407 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K+LG G +G LC K TG + A K I K + + + EV ++ L P
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HP 64
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI++L +EDK++ +LVME+ GGELFD II + ++E AA +++ ++ H
Sbjct: 65 NIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN 124
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRKYGP 260
++HRDLKPEN LL +K ++ +K DFGLS ++ G K+ +G+AYYIAPEVL++KY
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDE 184
Query: 261 EADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKML 320
+ D+WS GV+LYILLCG PPF +++ I + +G F W +S +AK LVK ML
Sbjct: 185 KCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLML 244
Query: 321 NSDPKQRLTATEVLAHPWIKEDGEAPDVPLD----NAVLSRLKQFKAMNKFKKVALRVIA 376
+P +R++A E L HPWI + + L +K+F++ K + A+ +
Sbjct: 245 TYEPSKRISAEEALNHPWIVKFCSQKHTDVGKHALTGALGNMKKFQSSQKLAQAAMLFMG 304
Query: 377 GCLSE-EEIMGLKEMFKSIDTDNSGTITLEELKQGLAK----QGTKLSEYEAKQ------ 425
L+ EE L ++F+ +D + G + +EL +G K +G +S+ ++ Q
Sbjct: 305 SKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVD 364
Query: 426 -LMEAADADGNGTIDYHEFITATMHLNRMDREEHLYTAFQHFDKDNS 471
++++ D D NG I+Y EF+T M + E L AFQ FD D S
Sbjct: 365 HILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGS 411
Score = 35.0 bits (79), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
LS E ++ F+ D+D SG IT EEL G T++ + Q+++ D + +G +
Sbjct: 394 LSRERLLA---AFQQFDSDGSGKITNEEL--GRLFGVTEVDDETWHQVLQECDKNNDGEV 448
Query: 439 DYHEFI 444
D+ EF+
Sbjct: 449 DFEEFV 454
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 245 bits (625), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 147/409 (35%), Positives = 220/409 (53%), Gaps = 23/409 (5%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---------VNKEDI-EDVRREVQIMH 134
++LG G +G LC K + A K I K + N E E++ E+ ++
Sbjct: 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 135 HLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
L PNI++L +EDK+ +LV E GGELF++II + + E AA++++ I+ I
Sbjct: 102 SLD-HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGIC 160
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVL 254
H ++HRD+KPEN LL NK+ +K DFGLS F+ + +D +G+AYYIAPEVL
Sbjct: 161 YLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVL 220
Query: 255 KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKD 314
K+KY + D+WS GV++YILLCG PPF +++ I + +G F + W +IS +AK+
Sbjct: 221 KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKE 280
Query: 315 LVKKMLNSDPKQRLTATEVLAHPWIKE---DGEAPDVPLDNAVLSRLKQFKAMNKFKKVA 371
L+K ML D +R TA E L WIK+ + D LS +++F+ K + A
Sbjct: 281 LIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAA 340
Query: 372 LRVIAGCLSE-EEIMGLKEMFKSIDTDNSGTITLEELKQG---LAKQGTKLSEY-----E 422
+ I L+ EE L ++FK +D + G + +EL +G L +L E E
Sbjct: 341 ILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEE 400
Query: 423 AKQLMEAADADGNGTIDYHEFITATMHLNRMDREEHLYTAFQHFDKDNS 471
+++ D D NG I+Y EFI+ M + EE L AF FD D S
Sbjct: 401 VDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKS 449
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 375 IAGCLSEEEIMG---LKEMFKSIDTDNSGTITLEELKQ--GLAKQGTKLSEYEAKQLMEA 429
I+ C+ ++ + L+ F DTD SG IT EEL GL T +SE ++
Sbjct: 422 ISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGL----TSISEKTWNDVLGE 477
Query: 430 ADADGNGTIDYHEFITATMH 449
AD + + ID+ EF++ MH
Sbjct: 478 ADQNKDNMIDFDEFVS-MMH 496
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 109/266 (40%), Positives = 165/266 (62%), Gaps = 4/266 (1%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHH 135
D+ Y+ +GRG +G + KGT + A K I K + ED++ ++E++IM
Sbjct: 23 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKS 79
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
L PNI+ L +ED ++LVMELC GGELF+R++ K + E AA +++ ++ +
Sbjct: 80 L-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 138
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK 255
CH + V HRDLKPENFL L +SPLK DFGL+ +K G++ + VG+ YY++P+VL+
Sbjct: 139 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 198
Query: 256 RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
YGPE D WS GVM+Y+LLCG PPF A ++ + I G F W ++SPQA+ L
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESL 258
Query: 316 VKKMLNSDPKQRLTATEVLAHPWIKE 341
++++L PKQR+T+ + L H W ++
Sbjct: 259 IRRLLTKSPKQRITSLQALEHEWFEK 284
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 109/266 (40%), Positives = 165/266 (62%), Gaps = 4/266 (1%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHH 135
D+ Y+ +GRG +G + KGT + A K I K + ED++ ++E++IM
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKS 62
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
L PNI+ L +ED ++LVMELC GGELF+R++ K + E AA +++ ++ +
Sbjct: 63 L-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 121
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK 255
CH + V HRDLKPENFL L +SPLK DFGL+ +K G++ + VG+ YY++P+VL+
Sbjct: 122 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 181
Query: 256 RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
YGPE D WS GVM+Y+LLCG PPF A ++ + I G F W ++SPQA+ L
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESL 241
Query: 316 VKKMLNSDPKQRLTATEVLAHPWIKE 341
++++L PKQR+T+ + L H W ++
Sbjct: 242 IRRLLTKSPKQRITSLQALEHEWFEK 267
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 235 bits (599), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 180/300 (60%), Gaps = 5/300 (1%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
+ ED+K + F + LG G F L K TG+ FA K I K+ L KE + E+
Sbjct: 15 KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKES--SIENEIA 72
Query: 132 IMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQ 191
++ + + NIV L+ YE ++LVM+L +GGELFDRI+ KG YTE+ A++L+R ++
Sbjct: 73 VLRKIKHE-NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLD 131
Query: 192 IIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAP 251
++ H MG++HRDLKPEN L ++DE S + +DFGLS +G+V G+ Y+AP
Sbjct: 132 AVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAP 191
Query: 252 EVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISP 310
EVL +K Y D WSIGV+ YILLCG PPF+ E++ +F IL+ +F S W IS
Sbjct: 192 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISD 251
Query: 311 QAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLKQFKAMNKFKKV 370
AKD ++ ++ DP +R T + HPWI D A + + +V +++++ A +K+++
Sbjct: 252 SAKDFIRNLMEKDPNKRYTCEQAARHPWIAGD-TALNKNIHESVSAQIRKNFAKSKWRQA 310
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 173/296 (58%), Gaps = 5/296 (1%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH 134
ED++ Y F LG G F L K T + A K IAK+ L KE + E+ ++H
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEG--SMENEIAVLH 71
Query: 135 HLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
+ PNIV L YE ++L+M+L +GGELFDRI+ KG YTER A+ L+ ++ +
Sbjct: 72 KIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVL 254
H +G++HRDLKPEN L + DE+S + +DFGLS G V G+ Y+APEVL
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL 190
Query: 255 KRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAK 313
+K Y D WSIGV+ YILLCG PPF+ E++ +F IL+ +F S W IS AK
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 314 DLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLKQFKAMNKFKK 369
D ++ ++ DP++R T + L HPWI D A D + +V ++K+ A +K+K+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAGD-TALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 228 bits (580), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 172/296 (58%), Gaps = 5/296 (1%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH 134
ED++ Y F LG G F L K T + A K IAK L KE + E+ ++H
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAVLH 71
Query: 135 HLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
+ PNIV L YE ++L+M+L +GGELFDRI+ KG YTER A+ L+ ++ +
Sbjct: 72 KIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVL 254
H +G++HRDLKPEN L + DE+S + +DFGLS G V G+ Y+APEVL
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL 190
Query: 255 KRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAK 313
+K Y D WSIGV+ YILLCG PPF+ E++ +F IL+ +F S W IS AK
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 314 DLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLKQFKAMNKFKK 369
D ++ ++ DP++R T + L HPWI D A D + +V ++K+ A +K+K+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAGD-TALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 227 bits (579), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 172/296 (58%), Gaps = 5/296 (1%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH 134
ED++ Y F LG G F L K T + A K IAK L KE + E+ ++H
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAVLH 71
Query: 135 HLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
+ PNIV L YE ++L+M+L +GGELFDRI+ KG YTER A+ L+ ++ +
Sbjct: 72 KIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVL 254
H +G++HRDLKPEN L + DE+S + +DFGLS G V G+ Y+APEVL
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL 190
Query: 255 KRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAK 313
+K Y D WSIGV+ YILLCG PPF+ E++ +F IL+ +F S W IS AK
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 314 DLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLKQFKAMNKFKK 369
D ++ ++ DP++R T + L HPWI D A D + +V ++K+ A +K+K+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAGD-TALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 224 bits (572), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 114/297 (38%), Positives = 170/297 (57%), Gaps = 3/297 (1%)
Query: 80 TYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQ 139
Y +ELG+G F + C HK TG +FA K I +KL + D + + RE +I L
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-H 87
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSM 199
PNIV L + +++ +LV +L GGELF+ I+A+ Y+E A+ ++ I++ I CHS
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 147
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRK-Y 258
G++HR+LKPEN LL +K + + +K DFGL++ E + G+ Y++PEVLK+ Y
Sbjct: 148 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY 207
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
DIW+ GV+LYILL G PPFW E +H ++ I G D+ S W +++P+AK L+
Sbjct: 208 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS 267
Query: 319 MLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLKQFKAMNKFKKVALRVI 375
ML +PK+R+TA + L PWI + LK+F A K K L +
Sbjct: 268 MLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTM 324
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 224 bits (572), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 120/293 (40%), Positives = 175/293 (59%), Gaps = 10/293 (3%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
ELGRG I + C KGT + +A K + +K V+K+ VR E+ ++ L+ PNI++L
Sbjct: 60 ELGRGATSIVYRCKQKGTQKPYALKVL--KKTVDKKI---VRTEIGVLLRLS-HPNIIKL 113
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRD 205
K +E + LV+EL GGELFDRI+ KG+Y+ER AA ++ I++ + H G++HRD
Sbjct: 114 KEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRD 173
Query: 206 LKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKR-KYGPEADI 264
LKPEN L ++PLK DFGLS + + K + G+ Y APE+L+ YGPE D+
Sbjct: 174 LKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDM 233
Query: 265 WSIGVMLYILLCGVPPFWAE-SEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
WS+G++ YILLCG PF+ E + +F IL F S W +S AKDLV+K++ D
Sbjct: 234 WSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLD 293
Query: 324 PKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLKQFKAMNKFKKVALRVIA 376
PK+RLT + L HPW+ G+A + + +L++F A K K V+A
Sbjct: 294 PKKRLTTFQALQHPWVT--GKAANFVHMDTAQKKLQEFNARRKLKAAVKAVVA 344
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 224 bits (571), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 114/269 (42%), Positives = 157/269 (58%), Gaps = 4/269 (1%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH 134
ED++ Y F LG G F L K T + A K IAK L KE + E+ ++H
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAVLH 71
Query: 135 HLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
+ PNIV L YE ++L+M+L +GGELFDRI+ KG YTER A+ L+ ++ +
Sbjct: 72 KIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVL 254
H +G++HRDLKPEN L + DE+S + +DFGLS G V G+ Y+APEVL
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL 190
Query: 255 KRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAK 313
+K Y D WSIGV+ YILLCG PPF+ E++ +F IL+ +F S W IS AK
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 314 DLVKKMLNSDPKQRLTATEVLAHPWIKED 342
D ++ ++ DP++R T + L HPWI D
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/317 (36%), Positives = 182/317 (57%), Gaps = 7/317 (2%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y +ELG+G F + C TGQ++A K I +KL + D + + RE +I L P
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL-SARDHQKLEREARICR-LLKHP 63
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NIV L + ++ +LV +L GGELF+ I+A+ +Y+E A+ ++ I++ ++ CH G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK-QGEVFKDIVGSAYYIAPEVLKRK-Y 258
++HRDLKPEN LL +K + + +K DFGL++ + + + G+ Y++PEVL++ Y
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
G D+W+ GV+LYILL G PPFW E +H ++ I G DF S W +++P+AKDL+ K
Sbjct: 184 GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 243
Query: 319 MLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLKQFKAMNKFKKVALRVIAGC 378
ML +P +R+TA+E L HPWI + + + LK+F A K K L +
Sbjct: 244 MLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTM--- 300
Query: 379 LSEEEIMGLKEMFKSID 395
L+ K + K D
Sbjct: 301 LATRNFSAAKSLLKKPD 317
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/260 (43%), Positives = 161/260 (61%), Gaps = 1/260 (0%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y + LG+G FG LC K TGQ+ A K I+KR++ K D E + REVQ++ L P
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HP 92
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI++L +EDK +LV E+ GGELFD II++ ++E AA ++R ++ I H
Sbjct: 93 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 152
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRKYGP 260
++HRDLKPEN LL +K +++ ++ DFGLS ++ + KD +G+AYYIAPEVL Y
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE 212
Query: 261 EADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKML 320
+ D+WS GV+LYILL G PPF +E+ I + +G F W +S AKDL++KML
Sbjct: 213 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML 272
Query: 321 NSDPKQRLTATEVLAHPWIK 340
P R++A + L H WI+
Sbjct: 273 TYVPSMRISARDALDHEWIQ 292
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 173/293 (59%), Gaps = 4/293 (1%)
Query: 78 KATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLT 137
++ Y +ELG+G F + C GQ++A K I +KL + D + + RE +I L
Sbjct: 21 QSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKL-SARDHQKLEREARICR-LL 78
Query: 138 GQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCH 197
PNIV L + ++ +L+ +L GGELF+ I+A+ +Y+E A+ ++ I++ + CH
Sbjct: 79 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 138
Query: 198 SMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK-QGEVFKDIVGSAYYIAPEVLKR 256
MGV+HRDLKPEN LL +K + + +K DFGL++ + + + + G+ Y++PEVL++
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRK 198
Query: 257 K-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
YG D+W+ GV+LYILL G PPFW E +H ++ I G DF S W +++P+AKDL
Sbjct: 199 DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDL 258
Query: 316 VKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLKQFKAMNKFK 368
+ KML +P +R+TA E L HPWI + LK+F A K K
Sbjct: 259 INKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLK 311
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 175/294 (59%), Gaps = 4/294 (1%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y +ELG+G F + C TGQ++A K I +KL + D + + RE +I L P
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL-SARDHQKLEREARICR-LLKHP 63
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NIV L + ++ +LV +L GGELF+ I+A+ +Y+E A+ ++ I++ ++ CH G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK-QGEVFKDIVGSAYYIAPEVLKRK-Y 258
++HRDLKPEN LL +K + + +K DFGL++ + + + G+ Y++PEVL++ Y
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
G D+W+ GV+LYILL G PPFW E +H ++ I G DF S W +++P+AKDL+ K
Sbjct: 184 GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 243
Query: 319 MLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLKQFKAMNKFKKVAL 372
ML +P +R+TA+E L HPWI + + + LK+F A K K L
Sbjct: 244 MLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAIL 297
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 173/297 (58%), Gaps = 4/297 (1%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y +ELG+G F + C GQ++A I +KL + D + + RE +I L P
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICR-LLKHP 70
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NIV L + ++ +L+ +L GGELF+ I+A+ +Y+E A+ ++ I++ + CH MG
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 130
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK-QGEVFKDIVGSAYYIAPEVLKRK-Y 258
V+HR+LKPEN LL +K + + +K DFGL++ + + + + G+ Y++PEVL++ Y
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 190
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
G D+W+ GV+LYILL G PPFW E +H ++ I G DF S W +++P+AKDL+ K
Sbjct: 191 GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 250
Query: 319 MLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLKQFKAMNKFKKVALRVI 375
ML +P +R+TA E L HPWI + LK+F A K K L V+
Sbjct: 251 MLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVM 307
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/261 (40%), Positives = 160/261 (61%), Gaps = 3/261 (1%)
Query: 80 TYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQ 139
Y +ELG+G F + C HK TG +FA K I +KL + D + + RE +I L
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-H 63
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSM 199
PNIV L + +++ +LV +L GGELF+ I+A+ Y+E A+ ++ I++ I CHS
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 123
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRK-Y 258
G++HR+LKPEN LL +K + + +K DFGL++ E + G+ Y++PEVLK+ Y
Sbjct: 124 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY 183
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
DIW+ GV+LYILL G PPFW E +H ++ I G D+ S W +++P+AK L+
Sbjct: 184 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS 243
Query: 319 MLNSDPKQRLTATEVLAHPWI 339
ML +PK+R+TA + L PWI
Sbjct: 244 MLTVNPKKRITADQALKVPWI 264
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/255 (43%), Positives = 157/255 (61%), Gaps = 2/255 (0%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LG+G FG C + T Q++A K I K NK D + REV+++ L PNI++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKL-DHPNIMKLF 87
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRDL 206
ED S ++V EL GGELFD II + ++E AA +++ + I H ++HRDL
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 207 KPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRKYGPEADIWS 266
KPEN LL +K+++ +K DFGLS ++Q KD +G+AYYIAPEVL+ Y + D+WS
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWS 207
Query: 267 IGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSDPKQ 326
GV+LYILL G PPF+ ++E+ I + G F W +IS AKDL++KML P
Sbjct: 208 AGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSL 267
Query: 327 RLTATEVLAHPWIKE 341
R+TAT+ L HPWI++
Sbjct: 268 RITATQCLEHPWIQK 282
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/261 (40%), Positives = 160/261 (61%), Gaps = 3/261 (1%)
Query: 80 TYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQ 139
Y +ELG+G F + C HK TG +FA K I +KL + D + + RE +I L
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-H 64
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSM 199
PNIV L + +++ +LV +L GGELF+ I+A+ Y+E A+ ++ I++ I CHS
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRK-Y 258
G++HR+LKPEN LL +K + + +K DFGL++ E + G+ Y++PEVLK+ Y
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY 184
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
DIW+ GV+LYILL G PPFW E +H ++ I G D+ S W +++P+AK L+
Sbjct: 185 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS 244
Query: 319 MLNSDPKQRLTATEVLAHPWI 339
ML +PK+R+TA + L PWI
Sbjct: 245 MLTVNPKKRITADQALKVPWI 265
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/261 (40%), Positives = 160/261 (61%), Gaps = 3/261 (1%)
Query: 80 TYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQ 139
Y +ELG+G F + C HK TG +FA K I +KL + D + + RE +I L
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ-H 64
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSM 199
PNIV L + +++ +LV +L GGELF+ I+A+ Y+E A+ ++ I++ I CHS
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRK-Y 258
G++HR+LKPEN LL +K + + +K DFGL++ E + G+ Y++PEVLK+ Y
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY 184
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
DIW+ GV+LYILL G PPFW E +H ++ I G D+ S W +++P+AK L+
Sbjct: 185 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS 244
Query: 319 MLNSDPKQRLTATEVLAHPWI 339
ML +PK+R+TA + L PWI
Sbjct: 245 MLTVNPKKRITADQALKVPWI 265
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/255 (43%), Positives = 157/255 (61%), Gaps = 2/255 (0%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LG+G FG C + T Q++A K I K NK D + REV+++ L PNI++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKL-DHPNIMKLF 87
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRDL 206
ED S ++V EL GGELFD II + ++E AA +++ + I H ++HRDL
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 207 KPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRKYGPEADIWS 266
KPEN LL +K+++ +K DFGLS ++Q KD +G+AYYIAPEVL+ Y + D+WS
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWS 207
Query: 267 IGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSDPKQ 326
GV+LYILL G PPF+ ++E+ I + G F W +IS AKDL++KML P
Sbjct: 208 AGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSL 267
Query: 327 RLTATEVLAHPWIKE 341
R+TAT+ L HPWI++
Sbjct: 268 RITATQCLEHPWIQK 282
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/259 (41%), Positives = 158/259 (61%), Gaps = 1/259 (0%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K+LG G +G LC K TG + A K I K + + + EV ++ L P
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HP 81
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI++L +EDK++ +LVME+ GGELFD II + ++E AA +++ ++ H
Sbjct: 82 NIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN 141
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRKYGP 260
++HRDLKPEN LL +K ++ +K DFGLS ++ G K+ +G+AYYIAPEVL++KY
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDE 201
Query: 261 EADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKML 320
+ D+WS GV+LYILLCG PPF +++ I + +G F W +S +AK LVK ML
Sbjct: 202 KCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLML 261
Query: 321 NSDPKQRLTATEVLAHPWI 339
+P +R++A E L HPWI
Sbjct: 262 TYEPSKRISAEEALNHPWI 280
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 214 bits (546), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 108/290 (37%), Positives = 172/290 (59%), Gaps = 4/290 (1%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y +++G+G F + C TG ++A K I +KL + D + + RE +I L
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKL-SARDHQKLEREARICR-LLKHS 63
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NIV L + ++ +LV +L GGELF+ I+A+ +Y+E A+ ++ I++ + CH MG
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 123
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK-QGEVFKDIVGSAYYIAPEVLKRK-Y 258
V+HRDLKPEN LL +K + + +K DFGL++ + + + G+ Y++PEVL+++ Y
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAY 183
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
G DIW+ GV+LYILL G PPFW E +H ++ I G DF S W +++P+AK+L+ +
Sbjct: 184 GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQ 243
Query: 319 MLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLKQFKAMNKFK 368
ML +P +R+TA E L HPW+ + + + LK+F A K K
Sbjct: 244 MLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLK 293
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 211 bits (536), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 108/265 (40%), Positives = 156/265 (58%), Gaps = 6/265 (2%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHH 135
+++ T+ F + LG G F L + TG+ FA K I K +E+ E+ ++
Sbjct: 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLEN---EIAVLKK 62
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
+ + NIV L+ YE +LVM+L +GGELFDRI+ +G YTE+ A+ +++ ++ +
Sbjct: 63 IKHE-NIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKY 121
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK 255
H G++HRDLKPEN L L +ENS + TDFGLS + G + G+ Y+APEVL
Sbjct: 122 LHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-IMSTACGTPGYVAPEVLA 180
Query: 256 RK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKD 314
+K Y D WSIGV+ YILLCG PPF+ E+E +F I G+ +F S W IS AKD
Sbjct: 181 QKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKD 240
Query: 315 LVKKMLNSDPKQRLTATEVLAHPWI 339
+ +L DP +R T + L+HPWI
Sbjct: 241 FICHLLEKDPNERYTCEKALSHPWI 265
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 174/308 (56%), Gaps = 21/308 (6%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL------VNKEDIEDVRR 128
E+V Y G+ELG GQF + C K TG Q+A K I KR+ V++EDIE R
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 129 EVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRT 188
EV I+ + PN++ L YE+K V L++EL AGGELFD + K TE A L+
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIVGSAY 247
I+ ++ HS+ + H DLKPEN +LL+++ P +K DFGL+ G FK+I G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 248 YIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
++APE++ + G EAD+WSIGV+ YILL G PF +++ + + +F + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDN-AVLSRLKQFKAMN 365
+ S AKD ++++L DPK+R+T + L HPWIK P D LSR M
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK--------PKDTQQALSRKASAVNME 294
Query: 366 KFKKVALR 373
KFKK A R
Sbjct: 295 KFKKFAAR 302
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/274 (41%), Positives = 165/274 (60%), Gaps = 12/274 (4%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL------VNKEDIEDVRR 128
EDV+ Y G+ELG GQF I C KGTG+++A K I KR+L V++E+IE R
Sbjct: 8 EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE---R 64
Query: 129 EVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRT 188
EV I+ + PNI+ L +E+K V L++EL +GGELFD + K TE A L+
Sbjct: 65 EVNILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQ 123
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIVGSAY 247
I+ +H HS + H DLKPEN +LL+K+ +P +K DFG++ + G FK+I G+
Sbjct: 124 ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE 183
Query: 248 YIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
++APE++ + G EAD+WSIGV+ YILL G PF E++ I + DF + +
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFS 243
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
+ S AKD ++++L DPK+R+ + L H WIK
Sbjct: 244 NTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 171/295 (57%), Gaps = 6/295 (2%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y +ELG+G F + C K Q++A K I +KL + D + + RE +I L P
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKL-SARDHQKLEREARICR-LLKHP 90
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NIV L + ++ +LV +L GGELF+ I+A+ +Y+E A+ + I++ ++ H
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHD 150
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGE--VFKDIVGSAYYIAPEVLKRK- 257
++HRDLKPEN LL +K + + +K DFGL++ QGE + G+ Y++PEVL++
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAI-EVQGEQQAWFGFAGTPGYLSPEVLRKDP 209
Query: 258 YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVK 317
YG DIW+ GV+LYILL G PPFW E +H ++ I G DF S W +++P+AK+L+
Sbjct: 210 YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLIN 269
Query: 318 KMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLKQFKAMNKFKKVAL 372
+ML +P +R+TA + L HPW+ + + + L++F A K K L
Sbjct: 270 QMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAIL 324
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 207 bits (528), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 164/272 (60%), Gaps = 12/272 (4%)
Query: 77 VKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL------VNKEDIEDVRREV 130
V+ Y G+ELG GQF I C KGTG+++A K I KR+L V++E+IE REV
Sbjct: 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE---REV 59
Query: 131 QIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
I+ + PNI+ L +E+K V L++EL +GGELFD + K TE A L+ I+
Sbjct: 60 NILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL 118
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIVGSAYYI 249
+H HS + H DLKPEN +LL+K+ +P +K DFG++ + G FK+I G+ ++
Sbjct: 119 DGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFV 178
Query: 250 APEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSI 308
APE++ + G EAD+WSIGV+ YILL G PF E++ I + DF + + +
Sbjct: 179 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT 238
Query: 309 SPQAKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
S AKD ++++L DPK+R+T + L H WIK
Sbjct: 239 SELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 163/272 (59%), Gaps = 12/272 (4%)
Query: 77 VKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL------VNKEDIEDVRREV 130
V+ Y G+ELG GQF I C KGTG+++A K I KR+L V++E+IE REV
Sbjct: 24 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIE---REV 80
Query: 131 QIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
I+ + PNI+ L +E+K V L++EL +GGELFD + K TE A L+ I+
Sbjct: 81 NILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL 139
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIVGSAYYI 249
+H HS + H DLKPEN +LL+K+ +P +K DFG++ + G FK+I G+ ++
Sbjct: 140 DGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFV 199
Query: 250 APEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSI 308
APE++ + G EAD+WSIGV+ YILL G PF E++ I + DF + + +
Sbjct: 200 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT 259
Query: 309 SPQAKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
S AKD ++++L DPK+R+ + L H WIK
Sbjct: 260 SELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 110/274 (40%), Positives = 162/274 (59%), Gaps = 12/274 (4%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL------VNKEDIEDVRR 128
E+V Y G+ELG GQF + C K TG Q+A K I KR+ V++EDIE R
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 129 EVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRT 188
EV I+ + PN++ L YE+K V L++EL AGGELFD + K TE A L+
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIVGSAY 247
I+ ++ HS+ + H DLKPEN +LL+++ P +K DFGL+ G FK+I G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPA 182
Query: 248 YIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
++APE++ + G EAD+WSIGV+ YILL G PF +++ + + +F + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
+ S AKD ++++L DPK+R+T + L HPWIK
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 204 bits (520), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 110/274 (40%), Positives = 162/274 (59%), Gaps = 12/274 (4%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL------VNKEDIEDVRR 128
E+V Y G+ELG GQF + C K TG Q+A K I KR+ V++EDIE R
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 129 EVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRT 188
EV I+ + PN++ L YE+K V L++EL AGGELFD + K TE A L+
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIVGSAY 247
I+ ++ HS+ + H DLKPEN +LL+++ P +K DFGL+ G FK+I G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 248 YIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
++APE++ + G EAD+WSIGV+ YILL G PF +++ + + +F + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
+ S AKD ++++L DPK+R+T + L HPWIK
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 204 bits (519), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 110/274 (40%), Positives = 162/274 (59%), Gaps = 12/274 (4%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL------VNKEDIEDVRR 128
E+V Y G+ELG GQF + C K TG Q+A K I KR+ V++EDIE R
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 129 EVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRT 188
EV I+ + PN++ L YE+K V L++EL AGGELFD + K TE A L+
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIVGSAY 247
I+ ++ HS+ + H DLKPEN +LL+++ P +K DFGL+ G FK+I G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 248 YIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
++APE++ + G EAD+WSIGV+ YILL G PF +++ + + +F + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
+ S AKD ++++L DPK+R+T + L HPWIK
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 204 bits (519), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 110/274 (40%), Positives = 162/274 (59%), Gaps = 12/274 (4%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL------VNKEDIEDVRR 128
E+V Y G+ELG GQF + C K TG Q+A K I KR+ V++EDIE R
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 129 EVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRT 188
EV I+ + PN++ L YE+K V L++EL AGGELFD + K TE A L+
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIVGSAY 247
I+ ++ HS+ + H DLKPEN +LL+++ P +K DFGL+ G FK+I G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 248 YIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
++APE++ + G EAD+WSIGV+ YILL G PF +++ + + +F + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
+ S AKD ++++L DPK+R+T + L HPWIK
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 204 bits (519), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 110/274 (40%), Positives = 162/274 (59%), Gaps = 12/274 (4%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL------VNKEDIEDVRR 128
E+V Y G+ELG GQF + C K TG Q+A K I KR+ V++EDIE R
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 129 EVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRT 188
EV I+ + PN++ L YE+K V L++EL AGGELFD + K TE A L+
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIVGSAY 247
I+ ++ HS+ + H DLKPEN +LL+++ P +K DFGL+ G FK+I G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 248 YIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
++APE++ + G EAD+WSIGV+ YILL G PF +++ + + +F + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
+ S AKD ++++L DPK+R+T + L HPWIK
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 204 bits (519), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 110/274 (40%), Positives = 162/274 (59%), Gaps = 12/274 (4%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL------VNKEDIEDVRR 128
E+V Y G+ELG GQF + C K TG Q+A K I KR+ V++EDIE R
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 129 EVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRT 188
EV I+ + PN++ L YE+K V L++EL AGGELFD + K TE A L+
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIVGSAY 247
I+ ++ HS+ + H DLKPEN +LL+++ P +K DFGL+ G FK+I G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 248 YIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
++APE++ + G EAD+WSIGV+ YILL G PF +++ + + +F + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
+ S AKD ++++L DPK+R+T + L HPWIK
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/274 (40%), Positives = 162/274 (59%), Gaps = 12/274 (4%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL------VNKEDIEDVRR 128
E+V Y G+ELG GQF + C K TG Q+A K I KR+ V++EDIE R
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 129 EVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRT 188
EV I+ + PN++ L YE+K V L++EL AGGELFD + K TE A L+
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIVGSAY 247
I+ ++ HS+ + H DLKPEN +LL+++ P +K DFGL+ G FK+I G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 248 YIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
++APE++ + G EAD+WSIGV+ YILL G PF +++ + + +F + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
+ S AKD ++++L DPK+R+T + L HPWIK
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/274 (40%), Positives = 162/274 (59%), Gaps = 12/274 (4%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL------VNKEDIEDVRR 128
E+V Y G+ELG GQF + C K TG Q+A K I KR+ V++EDIE R
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 62
Query: 129 EVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRT 188
EV I+ + PN++ L YE+K V L++EL AGGELFD + K TE A L+
Sbjct: 63 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIVGSAY 247
I+ ++ HS+ + H DLKPEN +LL+++ P +K DFGL+ G FK+I G+
Sbjct: 122 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 181
Query: 248 YIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
++APE++ + G EAD+WSIGV+ YILL G PF +++ + + +F + +
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 241
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
+ S AKD ++++L DPK+R+T + L HPWIK
Sbjct: 242 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/274 (40%), Positives = 162/274 (59%), Gaps = 12/274 (4%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL------VNKEDIEDVRR 128
E+V Y G+ELG GQF + C K TG Q+A K I KR+ V++EDIE R
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 129 EVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRT 188
EV I+ + PN++ L YE+K V L++EL AGGELFD + K TE A L+
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIVGSAY 247
I+ ++ HS+ + H DLKPEN +LL+++ P +K DFGL+ G FK+I G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 248 YIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
++APE++ + G EAD+WSIGV+ YILL G PF +++ + + +F + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
+ S AKD ++++L DPK+R+T + L HPWIK
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/274 (40%), Positives = 162/274 (59%), Gaps = 12/274 (4%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL------VNKEDIEDVRR 128
E+V Y G+ELG GQF + C K TG Q+A K I KR+ V++EDIE R
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 62
Query: 129 EVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRT 188
EV I+ + PN++ L YE+K V L++EL AGGELFD + K TE A L+
Sbjct: 63 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIVGSAY 247
I+ ++ HS+ + H DLKPEN +LL+++ P +K DFGL+ G FK+I G+
Sbjct: 122 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 181
Query: 248 YIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
++APE++ + G EAD+WSIGV+ YILL G PF +++ + + +F + +
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 241
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
+ S AKD ++++L DPK+R+T + L HPWIK
Sbjct: 242 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 109/274 (39%), Positives = 162/274 (59%), Gaps = 12/274 (4%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL------VNKEDIEDVRR 128
E+V Y G+ELG G+F + C K TG Q+A K I KR+ V++EDIE R
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 129 EVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRT 188
EV I+ + PN++ L YE+K V L++EL AGGELFD + K TE A L+
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIVGSAY 247
I+ ++ HS+ + H DLKPEN +LL+++ P +K DFGL+ G FK+I G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 248 YIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
++APE++ + G EAD+WSIGV+ YILL G PF +++ + + +F + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
+ S AKD ++++L DPK+R+T + L HPWIK
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 201 bits (512), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 110/274 (40%), Positives = 161/274 (58%), Gaps = 12/274 (4%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL------VNKEDIEDVRR 128
E+V Y G+ELG GQF + C K TG Q+A K I KR+ V++EDIE R
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 129 EVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRT 188
EV I+ + PN++ L YE+K V L+ EL AGGELFD + K TE A L+
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIVGSAY 247
I+ ++ HS+ + H DLKPEN +LL+++ P +K DFGL+ G FK+I G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 248 YIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
++APE++ + G EAD+WSIGV+ YILL G PF +++ + + +F + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
+ S AKD ++++L DPK+R+T + L HPWIK
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/274 (39%), Positives = 161/274 (58%), Gaps = 12/274 (4%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL------VNKEDIEDVRR 128
E+V Y G+ELG G F + C K TG Q+A K I KR+ V++EDIE R
Sbjct: 7 ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 129 EVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRT 188
EV I+ + PN++ L YE+K V L++EL AGGELFD + K TE A L+
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIVGSAY 247
I+ ++ HS+ + H DLKPEN +LL+++ P +K DFGL+ G FK+I G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 248 YIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
++APE++ + G EAD+WSIGV+ YILL G PF +++ + + +F + +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
+ S AKD ++++L DPK+R+T + L HPWIK
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 174/312 (55%), Gaps = 15/312 (4%)
Query: 74 MEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDI--EDVRREVQ 131
EDV Y + +G+G F + C ++ TGQQFA K + K + + ED++RE
Sbjct: 22 FEDV---YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 78
Query: 132 IMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGH----YTERAAASLLR 187
I H L P+IVEL Y +++V E G +L I+ + Y+E A+ +R
Sbjct: 79 ICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 188 TIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSA 246
I++ + CH +IHRD+KPEN LL +K+ ++P+K DFG+++ + G V VG+
Sbjct: 138 QILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTP 197
Query: 247 YYIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPW 305
+++APEV+KR+ YG D+W GV+L+ILL G PF+ E +F I++G W
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQW 256
Query: 306 PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE-DGEAPDVPLDNAVLSRLKQFKAM 364
IS AKDLV++ML DP +R+T E L HPW+KE D A + L V +L++F A
Sbjct: 257 SHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETV-EQLRKFNAR 315
Query: 365 NKFKKVALRVIA 376
K K L ++
Sbjct: 316 RKLKGAVLAAVS 327
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 151/266 (56%), Gaps = 15/266 (5%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTI-AKRKLVNKEDIEDVR----REVQIMHHLTGQPN 141
+GRG + C H+ TG +FA K + + ++ E +E+VR RE I+ + G P+
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGV 201
I+ L +YE + LV +L GELFD + K +E+ S++R++++ + H+ +
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNI 221
Query: 202 IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRK---- 257
+HRDLKPEN LL D+N ++ +DFG S + GE +++ G+ Y+APE+LK
Sbjct: 222 VHRDLKPENILL---DDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDET 278
Query: 258 ---YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKD 314
YG E D+W+ GV+L+ LL G PPFW + + I+ G F+S W S KD
Sbjct: 279 HPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKD 338
Query: 315 LVKKMLNSDPKQRLTATEVLAHPWIK 340
L+ ++L DP+ RLTA + L HP+ +
Sbjct: 339 LISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 114/308 (37%), Positives = 170/308 (55%), Gaps = 21/308 (6%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL------VNKEDIEDVRR 128
+ V+ Y G+ELG GQF I C K TG ++A K I KR+ V +E+IE R
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIE---R 64
Query: 129 EVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRT 188
EV I+ + PNI+ L YE++ V L++EL +GGELFD + K +E A S ++
Sbjct: 65 EVSILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIVGSAY 247
I+ ++ H+ + H DLKPEN +LL+K+ P +K DFGL+ + G FK+I G+
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 248 YIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
++APE++ + G EAD+WSIGV+ YILL G PF +++ I DF + +
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS 243
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDN-AVLSRLKQFKAMN 365
S AKD ++K+L + ++RLT E L HPWI P+D + R + +
Sbjct: 244 QTSELAKDFIRKLLVKETRKRLTIQEALRHPWI--------TPVDTQQAMVRRESVVNLE 295
Query: 366 KFKKVALR 373
FKK +R
Sbjct: 296 NFKKQYVR 303
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 181/325 (55%), Gaps = 37/325 (11%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTI------AKRKLVNKEDIEDVRR 128
+ V+ Y G+ELG GQF I C K TG ++A K I A R+ V++E+IE R
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE---R 64
Query: 129 EV----QIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAAS 184
EV Q++HH N++ L YE++ V L++EL +GGELFD + K +E A S
Sbjct: 65 EVSILRQVLHH-----NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 185 LLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIV 243
++ I+ ++ H+ + H DLKPEN +LL+K+ P +K DFGL+ + G FK+I
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 244 GSAYYIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTS 302
G+ ++APE++ + G EAD+WSIGV+ YILL G PF +++ I DF
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 303 DPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDN--AVLSR--- 357
+ + S AKD ++K+L + ++RLT E L HPWI P+DN A++ R
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI--------TPVDNQQAMVRRESV 291
Query: 358 --LKQFKA--MNKFKKVALRVIAGC 378
L+ F+ + + K+A +++ C
Sbjct: 292 VNLENFRKQYVRRRSKLAFSIVSLC 316
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 171/312 (54%), Gaps = 15/312 (4%)
Query: 74 MEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDI--EDVRREVQ 131
EDV Y + +G+G F + C ++ TGQQFA K + K + + ED++RE
Sbjct: 24 FEDV---YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 80
Query: 132 IMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGH----YTERAAASLLR 187
I H L P+IVEL Y +++V E G +L I+ + Y+E A+ +R
Sbjct: 81 ICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 139
Query: 188 TIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSA 246
I++ + CH +IHRD+KP LL +K+ ++P+K FG+++ + G V VG+
Sbjct: 140 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP 199
Query: 247 YYIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPW 305
+++APEV+KR+ YG D+W GV+L+ILL G PF+ E +F I++G W
Sbjct: 200 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQW 258
Query: 306 PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE-DGEAPDVPLDNAVLSRLKQFKAM 364
IS AKDLV++ML DP +R+T E L HPW+KE D A + L V +L++F A
Sbjct: 259 SHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETV-EQLRKFNAR 317
Query: 365 NKFKKVALRVIA 376
K K L ++
Sbjct: 318 RKLKGAVLAAVS 329
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 181/325 (55%), Gaps = 37/325 (11%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTI------AKRKLVNKEDIEDVRR 128
+ V+ Y G+ELG GQF I C K TG ++A K I A R+ V++E+IE R
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE---R 64
Query: 129 EV----QIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAAS 184
EV Q++HH N++ L YE++ V L++EL +GGELFD + K +E A S
Sbjct: 65 EVSILRQVLHH-----NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 185 LLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIV 243
++ I+ ++ H+ + H DLKPEN +LL+K+ P +K DFGL+ + G FK+I
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 244 GSAYYIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTS 302
G+ ++APE++ + G EAD+WSIGV+ YILL G PF +++ I DF
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 303 DPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDN--AVLSR--- 357
+ + S AKD ++K+L + ++RLT E L HPWI P+DN A++ R
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI--------TPVDNQQAMVRRESV 291
Query: 358 --LKQFKA--MNKFKKVALRVIAGC 378
L+ F+ + + K+A +++ C
Sbjct: 292 VNLENFRKQYVRRRSKLAFSIVSLC 316
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 191 bits (485), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 171/312 (54%), Gaps = 15/312 (4%)
Query: 74 MEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDI--EDVRREVQ 131
EDV Y + +G+G F + C ++ TGQQFA K + K + + ED++RE
Sbjct: 22 FEDV---YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 78
Query: 132 IMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGH----YTERAAASLLR 187
I H L P+IVEL Y +++V E G +L I+ + Y+E A+ +R
Sbjct: 79 ICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 188 TIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSA 246
I++ + CH +IHRD+KP LL +K+ ++P+K FG+++ + G V VG+
Sbjct: 138 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP 197
Query: 247 YYIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPW 305
+++APEV+KR+ YG D+W GV+L+ILL G PF+ E +F I++G W
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQW 256
Query: 306 PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE-DGEAPDVPLDNAVLSRLKQFKAM 364
IS AKDLV++ML DP +R+T E L HPW+KE D A + L V +L++F A
Sbjct: 257 SHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETV-EQLRKFNAR 315
Query: 365 NKFKKVALRVIA 376
K K L ++
Sbjct: 316 RKLKGAVLAAVS 327
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 191 bits (485), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 173/312 (55%), Gaps = 29/312 (9%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL------VNKEDIEDVRR 128
+ V+ Y G+ELG GQF I C K TG ++A K I KR+ V++E+IE R
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE---R 64
Query: 129 EV----QIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAAS 184
EV Q++HH N++ L YE++ V L++EL +GGELFD + K +E A S
Sbjct: 65 EVSILRQVLHH-----NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 185 LLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIV 243
++ I+ ++ H+ + H DLKPEN +LL+K+ P +K DFGL+ + G FK+I
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 244 GSAYYIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTS 302
G+ ++APE++ + G EAD+WSIGV+ YILL G PF +++ I DF
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 303 DPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDN-AVLSRLKQF 361
+ + S AKD ++K+L + ++RLT E L HPWI P+DN + R +
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI--------TPVDNQQAMVRRESV 291
Query: 362 KAMNKFKKVALR 373
+ F+K +R
Sbjct: 292 VNLENFRKQYVR 303
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 173/312 (55%), Gaps = 29/312 (9%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTI------AKRKLVNKEDIEDVRR 128
+ V+ Y G+ELG GQF I C K TG ++A K I A R+ V++E+IE R
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE---R 64
Query: 129 EV----QIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAAS 184
EV Q++HH N++ L YE++ V L++EL +GGELFD + K +E A S
Sbjct: 65 EVSILRQVLHH-----NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 185 LLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIV 243
++ I+ ++ H+ + H DLKPEN +LL+K+ P +K DFGL+ + G FK+I
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 244 GSAYYIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTS 302
G+ ++APE++ + G EAD+WSIGV+ YILL G PF +++ I DF
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 303 DPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDN-AVLSRLKQF 361
+ + S AKD ++K+L + ++RLT E L HPWI P+DN + R +
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI--------TPVDNQQAMVRRESV 291
Query: 362 KAMNKFKKVALR 373
+ F+K +R
Sbjct: 292 VNLENFRKQYVR 303
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 164/290 (56%), Gaps = 28/290 (9%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTI------AKRKLVNKEDIEDVRR 128
+ V+ Y G+ELG GQF I C K TG ++A K I A R+ V++E+IE R
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE---R 64
Query: 129 EV----QIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAAS 184
EV Q++HH N++ L YE++ V L++EL +GGELFD + K +E A S
Sbjct: 65 EVSILRQVLHH-----NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 185 LLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSP-LKATDFGLSVFYKQGEVFKDIV 243
++ I+ ++ H+ + H DLKPEN +LL+K+ P +K DFGL+ + G FK+I
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 244 GSAYYIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTS 302
G+ ++APE++ + G EAD+WSIGV+ YILL G PF +++ I DF
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 303 DPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDN 352
+ + S AKD ++K+L + ++RLT E L HPWI P+DN
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI--------TPVDN 281
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/268 (36%), Positives = 150/268 (55%), Gaps = 16/268 (5%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTI--AKRKLVNKEDIEDVR----REVQIMHHLTGQP 140
LGRG + C HK T +++A K I + E+++++R +EV I+ ++G P
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 71
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI++LK YE LV +L GELFD + K +E+ ++R ++++I H +
Sbjct: 72 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 131
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRK--- 257
++HRDLKPEN LL D++ +K TDFG S GE +++ G+ Y+APE+++
Sbjct: 132 IVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMND 188
Query: 258 ----YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAK 313
YG E D+WS GV++Y LL G PPFW + + I+ G+ F S W S K
Sbjct: 189 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 248
Query: 314 DLVKKMLNSDPKQRLTATEVLAHPWIKE 341
DLV + L P++R TA E LAHP+ ++
Sbjct: 249 DLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/268 (36%), Positives = 150/268 (55%), Gaps = 16/268 (5%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTI--AKRKLVNKEDIEDVR----REVQIMHHLTGQP 140
LGRG + C HK T +++A K I + E+++++R +EV I+ ++G P
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI++LK YE LV +L GELFD + K +E+ ++R ++++I H +
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 144
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRK--- 257
++HRDLKPEN LL D++ +K TDFG S GE +++ G+ Y+APE+++
Sbjct: 145 IVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMND 201
Query: 258 ----YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAK 313
YG E D+WS GV++Y LL G PPFW + + I+ G+ F S W S K
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 261
Query: 314 DLVKKMLNSDPKQRLTATEVLAHPWIKE 341
DLV + L P++R TA E LAHP+ ++
Sbjct: 262 DLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/268 (36%), Positives = 149/268 (55%), Gaps = 16/268 (5%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTI--AKRKLVNKEDIEDVR----REVQIMHHLTGQP 140
LGRG + C HK T +++A K I + E+++++R +EV I+ ++G P
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI++LK YE LV +L GELFD + K +E+ ++R ++++I H +
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 144
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRK--- 257
++HRDLKPEN LL D++ +K TDFG S GE + + G+ Y+APE+++
Sbjct: 145 IVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMND 201
Query: 258 ----YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAK 313
YG E D+WS GV++Y LL G PPFW + + I+ G+ F S W S K
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 261
Query: 314 DLVKKMLNSDPKQRLTATEVLAHPWIKE 341
DLV + L P++R TA E LAHP+ ++
Sbjct: 262 DLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 187 bits (476), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 160/299 (53%), Gaps = 18/299 (6%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y + +G G + C HK T ++A K I K K D E++I+ P
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQHP 81
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ LK Y+D + V+LV EL GGEL D+I+ + ++ER A+ +L TI + + HS G
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 201 VIHRDLKPENFLLLNKDENSP-LKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLKRK- 257
V+HRDLKP N L +++ N L+ DFG + + + +A ++APEVLKR+
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 258 YGPEADIWSIGVMLYILLCGVPPFW---AESEHGIFNAILRGHIDFTSDPWPSISPQAKD 314
Y DIWS+G++LY +L G PF +++ I I G + W ++S AKD
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKD 261
Query: 315 LVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLK-----QFKAMNKFK 368
LV KML+ DP QRLTA +VL HPW+ + + P L + L +K + A+N K
Sbjct: 262 LVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDLQLVKGAMAATYSALNSSK 320
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 160/299 (53%), Gaps = 18/299 (6%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y + +G G + C HK T ++A K I K K D E++I+ P
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQHP 81
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ LK Y+D + V+LV EL GGEL D+I+ + ++ER A+ +L TI + + HS G
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 201 VIHRDLKPENFLLLNKDENSP-LKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLKRK- 257
V+HRDLKP N L +++ N L+ DFG + + + +A ++APEVLKR+
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 258 YGPEADIWSIGVMLYILLCGVPPFW---AESEHGIFNAILRGHIDFTSDPWPSISPQAKD 314
Y DIWS+G++LY +L G PF +++ I I G + W ++S AKD
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKD 261
Query: 315 LVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLK-----QFKAMNKFK 368
LV KML+ DP QRLTA +VL HPW+ + + P L + L +K + A+N K
Sbjct: 262 LVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDLQLVKGAMAATYSALNSSK 320
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 152/277 (54%), Gaps = 13/277 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y +++G G + + C HK T +FA K I K K D E++I+ P
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-------RDPTEEIEILLRYGQHP 76
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ LK Y+D + V++V EL GGEL D+I+ + ++ER A+++L TI + + H+ G
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG 136
Query: 201 VIHRDLKPENFLLLNKDEN-SPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLKRK- 257
V+HRDLKP N L +++ N ++ DFG + + + +A ++APEVL+R+
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQG 196
Query: 258 YGPEADIWSIGVMLYILLCGVPPFWA---ESEHGIFNAILRGHIDFTSDPWPSISPQAKD 314
Y DIWS+GV+LY +L G PF ++ I I G + W S+S AKD
Sbjct: 197 YDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKD 256
Query: 315 LVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLD 351
LV KML+ DP QRLTA VL HPWI + P L+
Sbjct: 257 LVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLN 293
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 105/280 (37%), Positives = 152/280 (54%), Gaps = 19/280 (6%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y +++G G + + C HK T +FA K I K K D E++I+ P
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSK-------RDPTEEIEILLRYGQHP 76
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ LK Y+D + V++V EL GGEL D+I+ + ++ER A+++L TI + + H+ G
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG 136
Query: 201 VIHRDLKPENFLLLNKDEN-SPLKATDFGLSVFYKQGEVFKDIVG----SAYYIAPEVLK 255
V+HRDLKP N L +++ N ++ DFG F KQ ++ +A ++APEVL+
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFG---FAKQLRAENGLLXTPCYTANFVAPEVLE 193
Query: 256 RK-YGPEADIWSIGVMLYILLCGVPPFWA---ESEHGIFNAILRGHIDFTSDPWPSISPQ 311
R+ Y DIWS+GV+LY L G PF ++ I I G + W S+S
Sbjct: 194 RQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDT 253
Query: 312 AKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLD 351
AKDLV K L+ DP QRLTA VL HPWI + P L+
Sbjct: 254 AKDLVSKXLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLN 293
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 181 bits (459), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 154/289 (53%), Gaps = 21/289 (7%)
Query: 77 VKATYSFGKE-LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHH 135
V Y K+ LG G G C H+ TGQ+ A K + D R+EV
Sbjct: 7 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY--------DSPKARQEVDHHWQ 58
Query: 136 LTGQPNIVELKGAYED----KQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLRTI 189
+G P+IV + YE+ K+ + ++ME GGELF RI +G +TER AA ++R I
Sbjct: 59 ASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDI 118
Query: 190 VQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYI 249
I HS + HRD+KPEN L +K++++ LK TDFG + Q + + YY+
Sbjct: 119 GTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-ALQTPCYTPYYV 177
Query: 250 APEVL-KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR----GHIDFTSDP 304
APEVL KY D+WS+GV++YILLCG PPF++ + I + R G F +
Sbjct: 178 APEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE 237
Query: 305 WPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNA 353
W +S AK L++ +L +DP +RLT T+ + HPWI + P PL A
Sbjct: 238 WSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTA 286
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 154/289 (53%), Gaps = 21/289 (7%)
Query: 77 VKATYSFGKE-LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHH 135
V Y K+ LG G G C H+ TGQ+ A K + D R+EV
Sbjct: 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY--------DSPKARQEVDHHWQ 77
Query: 136 LTGQPNIVELKGAYED----KQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLRTI 189
+G P+IV + YE+ K+ + ++ME GGELF RI +G +TER AA ++R I
Sbjct: 78 ASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDI 137
Query: 190 VQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYI 249
I HS + HRD+KPEN L +K++++ LK TDFG + Q + + YY+
Sbjct: 138 GTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-ALQTPCYTPYYV 196
Query: 250 APEVL-KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR----GHIDFTSDP 304
APEVL KY D+WS+GV++YILLCG PPF++ + I + R G F +
Sbjct: 197 APEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE 256
Query: 305 WPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNA 353
W +S AK L++ +L +DP +RLT T+ + HPWI + P PL A
Sbjct: 257 WSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTA 305
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 160/304 (52%), Gaps = 25/304 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G F I C HK + Q FA K I+KR N ++E+ + G PNIV+
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEAN------TQKEITALKLCEGHPNIVK 70
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L + D+ LVMEL GGELF+RI K H++E A+ ++R +V + H +GV+HR
Sbjct: 71 LHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHR 130
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFY-KQGEVFKDIVGSAYYIAPEVLKRK-YGPEA 262
DLKPEN L ++++N +K DFG + + K + +Y APE+L + Y
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESC 190
Query: 263 DIWSIGVMLYILLCGVPPFWAE-------SEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
D+WS+GV+LY +L G PF + S I I +G F + W ++S +AKDL
Sbjct: 191 DLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDL 250
Query: 316 VKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPL---------DNAVLSRLK-QFKAMN 365
++ +L DP +RL + + + W+++ + PL AV + +K F A N
Sbjct: 251 IQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVHTCVKATFHAFN 310
Query: 366 KFKK 369
K+K+
Sbjct: 311 KYKR 314
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 159/293 (54%), Gaps = 26/293 (8%)
Query: 74 MEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM 133
++D K T + LG G G +K T ++FA K + +D RREV++
Sbjct: 14 IDDYKVT---SQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELH 62
Query: 134 HHLTGQPNIVELKGAYED----KQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLR 187
+ P+IV + YE+ ++ + +VME GGELF RI +G +TER A+ +++
Sbjct: 63 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 122
Query: 188 TIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY 247
+I + I HS+ + HRD+KPEN L +K N+ LK TDFG + + + Y
Sbjct: 123 SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPY 182
Query: 248 YIAPEVL-KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIF------NAILRGHIDF 300
Y+APEVL KY D+WS+GV++YILLCG PPF+ S HG+ I G +F
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY--SNHGLAISPGMKTRIRMGQYEF 240
Query: 301 TSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNA 353
+ W +S + K L++ +L ++P QR+T TE + HPWI + + P PL +
Sbjct: 241 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 293
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 158/293 (53%), Gaps = 26/293 (8%)
Query: 74 MEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM 133
++D K T + LG G G +K T ++FA K + +D RREV++
Sbjct: 60 IDDYKVT---SQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELH 108
Query: 134 HHLTGQPNIVELKGAYED----KQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLR 187
+ P+IV + YE+ ++ + +VME GGELF RI +G +TER A+ +++
Sbjct: 109 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 168
Query: 188 TIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY 247
+I + I HS+ + HRD+KPEN L +K N+ LK TDFG + + Y
Sbjct: 169 SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 228
Query: 248 YIAPEVL-KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIF------NAILRGHIDF 300
Y+APEVL KY D+WS+GV++YILLCG PPF+ S HG+ I G +F
Sbjct: 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY--SNHGLAISPGMKTRIRMGQYEF 286
Query: 301 TSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNA 353
+ W +S + K L++ +L ++P QR+T TE + HPWI + + P PL +
Sbjct: 287 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 339
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 158/293 (53%), Gaps = 26/293 (8%)
Query: 74 MEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM 133
++D K T + LG G G +K T ++FA K + +D RREV++
Sbjct: 66 IDDYKVT---SQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELH 114
Query: 134 HHLTGQPNIVELKGAYED----KQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLR 187
+ P+IV + YE+ ++ + +VME GGELF RI +G +TER A+ +++
Sbjct: 115 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 174
Query: 188 TIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY 247
+I + I HS+ + HRD+KPEN L +K N+ LK TDFG + + Y
Sbjct: 175 SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 234
Query: 248 YIAPEVL-KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIF------NAILRGHIDF 300
Y+APEVL KY D+WS+GV++YILLCG PPF+ S HG+ I G +F
Sbjct: 235 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY--SNHGLAISPGMKTRIRMGQYEF 292
Query: 301 TSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNA 353
+ W +S + K L++ +L ++P QR+T TE + HPWI + + P PL +
Sbjct: 293 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 345
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 158/293 (53%), Gaps = 26/293 (8%)
Query: 74 MEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM 133
++D K T + LG G G +K T ++FA K + +D RREV++
Sbjct: 16 IDDYKVT---SQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELH 64
Query: 134 HHLTGQPNIVELKGAYED----KQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLR 187
+ P+IV + YE+ ++ + +VME GGELF RI +G +TER A+ +++
Sbjct: 65 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 124
Query: 188 TIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY 247
+I + I HS+ + HRD+KPEN L +K N+ LK TDFG + + Y
Sbjct: 125 SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 184
Query: 248 YIAPEVL-KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIF------NAILRGHIDF 300
Y+APEVL KY D+WS+GV++YILLCG PPF+ S HG+ I G +F
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY--SNHGLAISPGMKTRIRMGQYEF 242
Query: 301 TSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNA 353
+ W +S + K L++ +L ++P QR+T TE + HPWI + + P PL +
Sbjct: 243 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 295
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 158/293 (53%), Gaps = 26/293 (8%)
Query: 74 MEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM 133
++D K T + LG G G +K T ++FA K + +D RREV++
Sbjct: 15 IDDYKVT---SQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELH 63
Query: 134 HHLTGQPNIVELKGAYED----KQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLR 187
+ P+IV + YE+ ++ + +VME GGELF RI +G +TER A+ +++
Sbjct: 64 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 123
Query: 188 TIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY 247
+I + I HS+ + HRD+KPEN L +K N+ LK TDFG + + Y
Sbjct: 124 SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 183
Query: 248 YIAPEVL-KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIF------NAILRGHIDF 300
Y+APEVL KY D+WS+GV++YILLCG PPF+ S HG+ I G +F
Sbjct: 184 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY--SNHGLAISPGMKTRIRMGQYEF 241
Query: 301 TSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNA 353
+ W +S + K L++ +L ++P QR+T TE + HPWI + + P PL +
Sbjct: 242 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 294
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 158/293 (53%), Gaps = 26/293 (8%)
Query: 74 MEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM 133
++D K T + LG G G +K T ++FA K + +D RREV++
Sbjct: 14 IDDYKVT---SQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELH 62
Query: 134 HHLTGQPNIVELKGAYED----KQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLR 187
+ P+IV + YE+ ++ + +VME GGELF RI +G +TER A+ +++
Sbjct: 63 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 122
Query: 188 TIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY 247
+I + I HS+ + HRD+KPEN L +K N+ LK TDFG + + Y
Sbjct: 123 SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 182
Query: 248 YIAPEVL-KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIF------NAILRGHIDF 300
Y+APEVL KY D+WS+GV++YILLCG PPF+ S HG+ I G +F
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY--SNHGLAISPGMKTRIRMGQYEF 240
Query: 301 TSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNA 353
+ W +S + K L++ +L ++P QR+T TE + HPWI + + P PL +
Sbjct: 241 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 293
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 158/293 (53%), Gaps = 26/293 (8%)
Query: 74 MEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM 133
++D K T + LG G G +K T ++FA K + +D RREV++
Sbjct: 21 IDDYKVT---SQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELH 69
Query: 134 HHLTGQPNIVELKGAYED----KQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLR 187
+ P+IV + YE+ ++ + +VME GGELF RI +G +TER A+ +++
Sbjct: 70 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 129
Query: 188 TIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY 247
+I + I HS+ + HRD+KPEN L +K N+ LK TDFG + + Y
Sbjct: 130 SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 189
Query: 248 YIAPEVL-KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIF------NAILRGHIDF 300
Y+APEVL KY D+WS+GV++YILLCG PPF+ S HG+ I G +F
Sbjct: 190 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY--SNHGLAISPGMKTRIRMGQYEF 247
Query: 301 TSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNA 353
+ W +S + K L++ +L ++P QR+T TE + HPWI + + P PL +
Sbjct: 248 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 300
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 158/293 (53%), Gaps = 26/293 (8%)
Query: 74 MEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM 133
++D K T + LG G G +K T ++FA K + +D RREV++
Sbjct: 22 IDDYKVT---SQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELH 70
Query: 134 HHLTGQPNIVELKGAYED----KQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLR 187
+ P+IV + YE+ ++ + +VME GGELF RI +G +TER A+ +++
Sbjct: 71 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 130
Query: 188 TIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY 247
+I + I HS+ + HRD+KPEN L +K N+ LK TDFG + + Y
Sbjct: 131 SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 190
Query: 248 YIAPEVL-KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIF------NAILRGHIDF 300
Y+APEVL KY D+WS+GV++YILLCG PPF+ S HG+ I G +F
Sbjct: 191 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY--SNHGLAISPGMKTRIRMGQYEF 248
Query: 301 TSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNA 353
+ W +S + K L++ +L ++P QR+T TE + HPWI + + P PL +
Sbjct: 249 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 301
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 158/293 (53%), Gaps = 26/293 (8%)
Query: 74 MEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM 133
++D K T + LG G G +K T ++FA K + +D RREV++
Sbjct: 20 IDDYKVT---SQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELH 68
Query: 134 HHLTGQPNIVELKGAYED----KQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLR 187
+ P+IV + YE+ ++ + +VME GGELF RI +G +TER A+ +++
Sbjct: 69 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 128
Query: 188 TIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY 247
+I + I HS+ + HRD+KPEN L +K N+ LK TDFG + + Y
Sbjct: 129 SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 188
Query: 248 YIAPEVL-KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIF------NAILRGHIDF 300
Y+APEVL KY D+WS+GV++YILLCG PPF+ S HG+ I G +F
Sbjct: 189 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY--SNHGLAISPGMKTRIRMGQYEF 246
Query: 301 TSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNA 353
+ W +S + K L++ +L ++P QR+T TE + HPWI + + P PL +
Sbjct: 247 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 299
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 158/293 (53%), Gaps = 26/293 (8%)
Query: 74 MEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM 133
++D K T + LG G G +K T ++FA K + +D RREV++
Sbjct: 16 IDDYKVT---SQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELH 64
Query: 134 HHLTGQPNIVELKGAYED----KQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLR 187
+ P+IV + YE+ ++ + +VME GGELF RI +G +TER A+ +++
Sbjct: 65 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 124
Query: 188 TIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY 247
+I + I HS+ + HRD+KPEN L +K N+ LK TDFG + + Y
Sbjct: 125 SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 184
Query: 248 YIAPEVL-KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIF------NAILRGHIDF 300
Y+APEVL KY D+WS+GV++YILLCG PPF+ S HG+ I G +F
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY--SNHGLAISPGMKTRIRMGQYEF 242
Query: 301 TSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNA 353
+ W +S + K L++ +L ++P QR+T TE + HPWI + + P PL +
Sbjct: 243 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 295
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 158/293 (53%), Gaps = 26/293 (8%)
Query: 74 MEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM 133
++D K T + LG G G +K T ++FA K + +D RREV++
Sbjct: 30 IDDYKVT---SQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELH 78
Query: 134 HHLTGQPNIVELKGAYED----KQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLR 187
+ P+IV + YE+ ++ + +VME GGELF RI +G +TER A+ +++
Sbjct: 79 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 138
Query: 188 TIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY 247
+I + I HS+ + HRD+KPEN L +K N+ LK TDFG + + Y
Sbjct: 139 SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 198
Query: 248 YIAPEVL-KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIF------NAILRGHIDF 300
Y+APEVL KY D+WS+GV++YILLCG PPF+ S HG+ I G +F
Sbjct: 199 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY--SNHGLAISPGMKTRIRMGQYEF 256
Query: 301 TSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNA 353
+ W +S + K L++ +L ++P QR+T TE + HPWI + + P PL +
Sbjct: 257 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 309
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 154/265 (58%), Gaps = 8/265 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ F ++LG G FG HL + +G + KTI K + ++ +E + E++++ L P
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKSL-DHP 80
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRII---AKGH-YTERAAASLLRTIVQIIHTC 196
NI+++ +ED ++++VME C GGEL +RI+ A+G +E A L++ ++ +
Sbjct: 81 NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKR 256
HS V+H+DLKPEN L + +SP+K DFGL+ +K E + G+A Y+APEV KR
Sbjct: 141 HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKR 200
Query: 257 KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLV 316
+ DIWS GV++Y LL G PF S + ++ + P ++PQA DL+
Sbjct: 201 DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-LTPQAVDLL 259
Query: 317 KKMLNSDPKQRLTATEVLAHPWIKE 341
K+ML DP++R +A +VL H W K+
Sbjct: 260 KQMLTKDPERRPSAAQVLHHEWFKQ 284
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 148/264 (56%), Gaps = 7/264 (2%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y +ELG G FG+ H C K TG+ F K I ++K V+ E+ IM+ L P
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYT---VKNEISIMNQLH-HP 108
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGH-YTERAAASLLRTIVQIIHTCHSM 199
++ L A+EDK + L++E +GGELFDRI A+ + +E + +R + + H
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH 168
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRK-Y 258
++H D+KPEN + K +S +K DFGL+ E+ K +A + APE++ R+
Sbjct: 169 SIVHLDIKPENIMCETKKASS-VKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPV 227
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
G D+W+IGV+ Y+LL G+ PF E + + R +F D + S+SP+AKD +K
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKN 287
Query: 319 MLNSDPKQRLTATEVLAHPWIKED 342
+L +P++RLT + L HPW+K D
Sbjct: 288 LLQKEPRKRLTVHDALEHPWLKGD 311
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 150/269 (55%), Gaps = 9/269 (3%)
Query: 77 VKATYSFGKE--LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH 134
V + Y+ K LG G+FG H C TG + A K I R + +D E+V+ E+ +M+
Sbjct: 85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM---KDKEEVKNEISVMN 141
Query: 135 HLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGH-YTERAAASLLRTIVQII 193
L N+++L A+E K + LVME GGELFDRII + + TE ++ I + I
Sbjct: 142 QLD-HANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGI 200
Query: 194 HTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV 253
H M ++H DLKPEN L +N+D +K DFGL+ YK E K G+ ++APEV
Sbjct: 201 RHMHQMYILHLDLKPENILCVNRDAKQ-IKIIDFGLARRYKPREKLKVNFGTPEFLAPEV 259
Query: 254 LKRKY-GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQA 312
+ + D+WS+GV+ Y+LL G+ PF +++ N IL D + + IS +A
Sbjct: 260 VNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEA 319
Query: 313 KDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
K+ + K+L + R++A+E L HPW+ +
Sbjct: 320 KEFISKLLIKEKSWRISASEALKHPWLSD 348
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 152/293 (51%), Gaps = 26/293 (8%)
Query: 74 MEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM 133
++D K T + LG G G +K T ++FA K + +D RREV++
Sbjct: 60 IDDYKVT---SQVLGLGINGKVLQIFNKRTQEKFALKXL--------QDCPKARREVELH 108
Query: 134 HHLTGQPNIVELKGAYED----KQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLR 187
+ P+IV + YE+ ++ + +V E GGELF RI +G +TER A+ + +
Sbjct: 109 WRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXK 168
Query: 188 TIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY 247
+I + I HS+ + HRD+KPEN L +K N+ LK TDFG + + Y
Sbjct: 169 SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 228
Query: 248 YIAPEVL-KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIF------NAILRGHIDF 300
Y+APEVL KY D WS+GV+ YILLCG PPF+ S HG+ I G +F
Sbjct: 229 YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFY--SNHGLAISPGXKTRIRXGQYEF 286
Query: 301 TSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNA 353
+ W +S + K L++ +L ++P QR T TE HPWI + + P PL +
Sbjct: 287 PNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTPLHTS 339
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 146/275 (53%), Gaps = 18/275 (6%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIE-----DVRREVQIMHH 135
Y K LG G G L + T ++ A K I+KRK E +V E++I+
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 70
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
L P I+++K + D + ++V+EL GGELFD+++ E ++ +
Sbjct: 71 L-NHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 128
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVL- 254
H G+IHRDLKPEN LL +++E+ +K TDFG S + + + + G+ Y+APEVL
Sbjct: 129 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 188
Query: 255 ---KRKYGPEADIWSIGVMLYILLCGVPPFWAESEH----GIFNAILRGHIDFTSDPWPS 307
Y D WS+GV+L+I L G PPF SEH + + I G +F + W
Sbjct: 189 SVGTAGYNRAVDCWSLGVILFICLSGYPPF---SEHRTQVSLKDQITSGKYNFIPEVWAE 245
Query: 308 ISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKED 342
+S +A DLVKK+L DPK R T E L HPW++++
Sbjct: 246 VSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 280
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 146/275 (53%), Gaps = 18/275 (6%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIE-----DVRREVQIMHH 135
Y K LG G G L + T ++ A K I+KRK E +V E++I+
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
L P I+++K + D + ++V+EL GGELFD+++ E ++ +
Sbjct: 72 L-NHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVL- 254
H G+IHRDLKPEN LL +++E+ +K TDFG S + + + + G+ Y+APEVL
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 255 ---KRKYGPEADIWSIGVMLYILLCGVPPFWAESEH----GIFNAILRGHIDFTSDPWPS 307
Y D WS+GV+L+I L G PPF SEH + + I G +F + W
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPF---SEHRTQVSLKDQITSGKYNFIPEVWAE 246
Query: 308 ISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKED 342
+S +A DLVKK+L DPK R T E L HPW++++
Sbjct: 247 VSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 146/275 (53%), Gaps = 18/275 (6%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIE-----DVRREVQIMHH 135
Y K LG G G L + T ++ A K I+KRK E +V E++I+
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
L P I+++K + D + ++V+EL GGELFD+++ E ++ +
Sbjct: 72 L-NHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVL- 254
H G+IHRDLKPEN LL +++E+ +K TDFG S + + + + G+ Y+APEVL
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 255 ---KRKYGPEADIWSIGVMLYILLCGVPPFWAESEH----GIFNAILRGHIDFTSDPWPS 307
Y D WS+GV+L+I L G PPF SEH + + I G +F + W
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPF---SEHRTQVSLKDQITSGKYNFIPEVWAE 246
Query: 308 ISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKED 342
+S +A DLVKK+L DPK R T E L HPW++++
Sbjct: 247 VSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 146/275 (53%), Gaps = 18/275 (6%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIE-----DVRREVQIMHH 135
Y K LG G G L + T ++ A K I+KRK E +V E++I+
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
L P I+++K + D + ++V+EL GGELFD+++ E ++ +
Sbjct: 72 L-NHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVL- 254
H G+IHRDLKPEN LL +++E+ +K TDFG S + + + + G+ Y+APEVL
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 255 ---KRKYGPEADIWSIGVMLYILLCGVPPFWAESEH----GIFNAILRGHIDFTSDPWPS 307
Y D WS+GV+L+I L G PPF SEH + + I G +F + W
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPF---SEHRTQVSLKDQITSGKYNFIPEVWAE 246
Query: 308 ISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKED 342
+S +A DLVKK+L DPK R T E L HPW++++
Sbjct: 247 VSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 146/275 (53%), Gaps = 18/275 (6%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIE-----DVRREVQIMHH 135
Y K LG G G L + T ++ A K I+KRK E +V E++I+
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 77
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
L P I+++K + D + ++V+EL GGELFD+++ E ++ +
Sbjct: 78 LN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 135
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVL- 254
H G+IHRDLKPEN LL +++E+ +K TDFG S + + + + G+ Y+APEVL
Sbjct: 136 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 195
Query: 255 ---KRKYGPEADIWSIGVMLYILLCGVPPFWAESEH----GIFNAILRGHIDFTSDPWPS 307
Y D WS+GV+L+I L G PPF SEH + + I G +F + W
Sbjct: 196 SVGTAGYNRAVDCWSLGVILFICLSGYPPF---SEHRTQVSLKDQITSGKYNFIPEVWAE 252
Query: 308 ISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKED 342
+S +A DLVKK+L DPK R T E L HPW++++
Sbjct: 253 VSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 287
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 148/279 (53%), Gaps = 18/279 (6%)
Query: 77 VKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIE-----DVRREVQ 131
++ Y K LG G G L + T ++ A + I+KRK E +V E++
Sbjct: 147 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 206
Query: 132 IMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQ 191
I+ L P I+++K + D + ++V+EL GGELFD+++ E ++
Sbjct: 207 ILKKL-NHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 264
Query: 192 IIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAP 251
+ H G+IHRDLKPEN LL +++E+ +K TDFG S + + + + G+ Y+AP
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 324
Query: 252 EVL----KRKYGPEADIWSIGVMLYILLCGVPPFWAESEH----GIFNAILRGHIDFTSD 303
EVL Y D WS+GV+L+I L G PPF SEH + + I G +F +
Sbjct: 325 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF---SEHRTQVSLKDQITSGKYNFIPE 381
Query: 304 PWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKED 342
W +S +A DLVKK+L DPK R T E L HPW++++
Sbjct: 382 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 420
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 140/264 (53%), Gaps = 10/264 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y G LG G FG + H+ TG + A K + ++K+ + + + +RRE+Q + L P
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLK-LFRHP 76
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+I++L + +VME +GGELFD I G E+ + L + I+ + CH
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKY- 258
V+HRDLKPEN LL D + K DFGLS GE + GS Y APEV+ R Y
Sbjct: 137 VVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYA 193
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
GPE DIWS GV+LY LLCG PF + +F I G I +T ++P L+K
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDG-IFYTPQ---YLNPSVISLLKH 249
Query: 319 MLNSDPKQRLTATEVLAHPWIKED 342
ML DP +R T ++ H W K+D
Sbjct: 250 MLQVDPMKRATIKDIREHEWFKQD 273
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 148/279 (53%), Gaps = 18/279 (6%)
Query: 77 VKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIE-----DVRREVQ 131
++ Y K LG G G L + T ++ A + I+KRK E +V E++
Sbjct: 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 192
Query: 132 IMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQ 191
I+ L P I+++K + D + ++V+EL GGELFD+++ E ++
Sbjct: 193 ILKKL-NHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 250
Query: 192 IIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAP 251
+ H G+IHRDLKPEN LL +++E+ +K TDFG S + + + + G+ Y+AP
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 310
Query: 252 EVL----KRKYGPEADIWSIGVMLYILLCGVPPFWAESEH----GIFNAILRGHIDFTSD 303
EVL Y D WS+GV+L+I L G PPF SEH + + I G +F +
Sbjct: 311 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF---SEHRTQVSLKDQITSGKYNFIPE 367
Query: 304 PWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKED 342
W +S +A DLVKK+L DPK R T E L HPW++++
Sbjct: 368 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/270 (35%), Positives = 145/270 (53%), Gaps = 14/270 (5%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y + +G G F L H TG+ A K + K L D+ ++ E++ + +L Q
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTL--GSDLPRIKTEIEALKNLRHQ- 68
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+I +L E + +V+E C GGELFD II++ +E + R IV + HS G
Sbjct: 69 HICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQG 128
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF--KDIVGSAYYIAPEVLKRK- 257
HRDLKPEN L DE LK DFGL K + + + GS Y APE+++ K
Sbjct: 129 YAHRDLKPENLLF---DEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKS 185
Query: 258 -YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLV 316
G EAD+WS+G++LY+L+CG PF ++ ++ I+RG D W +SP + L+
Sbjct: 186 YLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPK--W--LSPSSILLL 241
Query: 317 KKMLNSDPKQRLTATEVLAHPWIKEDGEAP 346
++ML DPK+R++ +L HPWI +D P
Sbjct: 242 QQMLQVDPKKRISMKNLLNHPWIMQDYNYP 271
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 150/292 (51%), Gaps = 45/292 (15%)
Query: 74 MEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM 133
++D K T + LG G G +K T ++FA K + +D RREV++
Sbjct: 16 IDDYKVT---SQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELH 64
Query: 134 HHLTGQPNIVELKGAYED----KQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLR 187
+ P+IV + YE+ ++ + +VME GGELF RI +G +TER A+ +++
Sbjct: 65 WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 124
Query: 188 TIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY 247
+I + I HS+ + HRD+KPEN L +K N+ LK TDFG
Sbjct: 125 SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF------------------ 166
Query: 248 YIAPEVLKRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIF------NAILRGHIDFT 301
A E KY D+WS+GV++YILLCG PPF+ S HG+ I G +F
Sbjct: 167 --AKETTGEKYDKSCDMWSLGVIMYILLCGYPPFY--SNHGLAISPGMKTRIRMGQYEFP 222
Query: 302 SDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNA 353
+ W +S + K L++ +L ++P QR+T TE + HPWI + + P PL +
Sbjct: 223 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 274
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 147/290 (50%), Gaps = 34/290 (11%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LG G + G+++A K I K+ ++ V REV+ ++ G NI+EL
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSR---VFREVETLYQCQGNKNILELI 77
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRDL 206
+ED +LV E GG + I + H+ ER A+ ++R + + H+ G+ HRDL
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDL 137
Query: 207 KPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDI--------VGSAYYIAPEVLK--- 255
KPEN L + ++ SP+K DF L K I GSA Y+APEV++
Sbjct: 138 KPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFT 197
Query: 256 ---RKYGPEADIWSIGVMLYILLCGVPPF---------WAESE------HGIFNAILRGH 297
Y D+WS+GV+LYI+L G PPF W E + +F +I G
Sbjct: 198 DQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGK 257
Query: 298 IDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPD 347
+F W IS +AKDL+ K+L D KQRL+A +VL HPW++ G+AP+
Sbjct: 258 YEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQ--GQAPE 305
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 138/264 (52%), Gaps = 10/264 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y G LG G FG + H+ TG + A K + ++K+ + + + ++RE+Q + L P
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LFRHP 71
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+I++L +VME +GGELFD I G E A L + I+ + CH
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKY- 258
V+HRDLKPEN LL D + K DFGLS GE +D GS Y APEV+ R Y
Sbjct: 132 VVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYA 188
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
GPE DIWS GV+LY LLCG PF E +F I RG + + + ++ L+
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI-RGGVFYIPE---YLNRSVATLLMH 244
Query: 319 MLNSDPKQRLTATEVLAHPWIKED 342
ML DP +R T ++ H W K+D
Sbjct: 245 MLQVDPLKRATIKDIREHEWFKQD 268
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 136/266 (51%), Gaps = 11/266 (4%)
Query: 79 ATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
Y K LG G FG L H TGQ+ A K I K+ L + + RE+ + L
Sbjct: 14 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR-LLR 72
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
P+I++L + K + +V+E AG ELFD I+ + +E+ A + I+ + CH
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 131
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRKY 258
++HRDLKPEN LL DE+ +K DFGLS G K GS Y APEV+ K
Sbjct: 132 HKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 188
Query: 259 --GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLV 316
GPE D+WS GV+LY++LC PF ES +F I G +SP A L+
Sbjct: 189 YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLI 244
Query: 317 KKMLNSDPKQRLTATEVLAHPWIKED 342
K+ML +P R++ E++ W K D
Sbjct: 245 KRMLIVNPLNRISIHEIMQDDWFKVD 270
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 136/266 (51%), Gaps = 11/266 (4%)
Query: 79 ATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
Y K LG G FG L H TGQ+ A K I K+ L + + RE+ + L
Sbjct: 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR-LLR 71
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
P+I++L + K + +V+E AG ELFD I+ + +E+ A + I+ + CH
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 130
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRKY 258
++HRDLKPEN LL DE+ +K DFGLS G K GS Y APEV+ K
Sbjct: 131 HKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 187
Query: 259 --GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLV 316
GPE D+WS GV+LY++LC PF ES +F I G +SP A L+
Sbjct: 188 YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLI 243
Query: 317 KKMLNSDPKQRLTATEVLAHPWIKED 342
K+ML +P R++ E++ W K D
Sbjct: 244 KRMLIVNPLNRISIHEIMQDDWFKVD 269
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 136/266 (51%), Gaps = 11/266 (4%)
Query: 79 ATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
Y K LG G FG L H TGQ+ A K I K+ L + + RE+ + L
Sbjct: 8 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR-LLR 66
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
P+I++L + K + +V+E AG ELFD I+ + +E+ A + I+ + CH
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 125
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRKY 258
++HRDLKPEN LL DE+ +K DFGLS G K GS Y APEV+ K
Sbjct: 126 HKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 182
Query: 259 --GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLV 316
GPE D+WS GV+LY++LC PF ES +F I G +SP A L+
Sbjct: 183 YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLI 238
Query: 317 KKMLNSDPKQRLTATEVLAHPWIKED 342
K+ML +P R++ E++ W K D
Sbjct: 239 KRMLIVNPLNRISIHEIMQDDWFKVD 264
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 136/266 (51%), Gaps = 11/266 (4%)
Query: 79 ATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
Y K LG G FG L H TGQ+ A K I K+ L + + RE+ + L
Sbjct: 4 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR-LLR 62
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
P+I++L + K + +V+E AG ELFD I+ + +E+ A + I+ + CH
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 121
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRKY 258
++HRDLKPEN LL DE+ +K DFGLS G K GS Y APEV+ K
Sbjct: 122 HKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 178
Query: 259 --GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLV 316
GPE D+WS GV+LY++LC PF ES +F I G +SP A L+
Sbjct: 179 YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLI 234
Query: 317 KKMLNSDPKQRLTATEVLAHPWIKED 342
K+ML +P R++ E++ W K D
Sbjct: 235 KRMLIVNPLNRISIHEIMQDDWFKVD 260
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 146/263 (55%), Gaps = 11/263 (4%)
Query: 79 ATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
Y K +G+G F L H TG++ A + I K +L N ++ + REV+IM L
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQL-NSSSLQKLFREVRIMKVLN- 71
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
PNIV+L E +++++LVME +GGE+FD ++A G E+ A + R IV + CH
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RK 257
++HRDLK EN LL D + +K DFG S + G + GS Y APE+ + +K
Sbjct: 132 KFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKK 188
Query: 258 Y-GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLV 316
Y GPE D+WS+GV+LY L+ G PF ++ + +LRG P+ +S ++L+
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLL 244
Query: 317 KKMLNSDPKQRLTATEVLAHPWI 339
KK L +P +R T +++ W+
Sbjct: 245 KKFLILNPSKRGTLEQIMKDRWM 267
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 145/263 (55%), Gaps = 11/263 (4%)
Query: 79 ATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
Y K +G+G F L H TG++ A K I K +L N ++ + REV+IM L
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLN- 71
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
PNIV+L E +++++LVME +GGE+FD ++A G E+ A + R IV + CH
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RK 257
++HRDLK EN LL D + +K DFG S + G GS Y APE+ + +K
Sbjct: 132 KFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 258 Y-GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLV 316
Y GPE D+WS+GV+LY L+ G PF ++ + +LRG P+ +S ++L+
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLL 244
Query: 317 KKMLNSDPKQRLTATEVLAHPWI 339
KK L +P +R T +++ W+
Sbjct: 245 KKFLILNPSKRGTLEQIMKDRWM 267
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 145/263 (55%), Gaps = 11/263 (4%)
Query: 79 ATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
Y K +G+G F L H TG++ A K I K +L N ++ + REV+IM L
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLN- 71
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
PNIV+L E +++++LVME +GGE+FD ++A G E+ A + R IV + CH
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RK 257
++HRDLK EN LL D + +K DFG S + G GS Y APE+ + +K
Sbjct: 132 KFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 258 Y-GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLV 316
Y GPE D+WS+GV+LY L+ G PF ++ + +LRG P+ +S ++L+
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLL 244
Query: 317 KKMLNSDPKQRLTATEVLAHPWI 339
KK L +P +R T +++ W+
Sbjct: 245 KKFLILNPSKRGTLEQIMKDRWM 267
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 140/264 (53%), Gaps = 19/264 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIE-DVRREVQIMHHLTGQ 139
Y + LG G FG L TH T Q+ A K I+ R+L+ K D+ V RE+ + L
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFIS-RQLLKKSDMHMRVEREISYLK-LLRH 68
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSM 199
P+I++L + +V+E AGGELFD I+ K TE + I+ I CH
Sbjct: 69 PHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH 127
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRKY- 258
++HRDLKPEN LL D+N +K DFGLS G K GS Y APEV+ K
Sbjct: 128 KIVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLY 184
Query: 259 -GPEADIWSIGVMLYILLCGVPPFWAESEHGIF---NAILRGHIDFTSDPWPSISPQAKD 314
GPE D+WS G++LY++L G PF E +F N+ + DF +SP A+
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDF-------LSPGAQS 237
Query: 315 LVKKMLNSDPKQRLTATEVLAHPW 338
L+++M+ +DP QR+T E+ PW
Sbjct: 238 LIRRMIVADPMQRITIQEIRRDPW 261
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 137/264 (51%), Gaps = 10/264 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y G LG G FG + H+ TG + A K + ++K+ + + + ++RE+Q + L P
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LFRHP 71
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+I++L +VME +GGELFD I G E A L + I+ + CH
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKY- 258
V+HRDLKPEN LL D + K DFGLS GE + GS Y APEV+ R Y
Sbjct: 132 VVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYA 188
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
GPE DIWS GV+LY LLCG PF E +F I RG + + + ++ L+
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI-RGGVFYIPE---YLNRSVATLLMH 244
Query: 319 MLNSDPKQRLTATEVLAHPWIKED 342
ML DP +R T ++ H W K+D
Sbjct: 245 MLQVDPLKRATIKDIREHEWFKQD 268
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 145/263 (55%), Gaps = 11/263 (4%)
Query: 79 ATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
Y K +G+G F L H TG++ A + I K +L N ++ + REV+IM L
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQL-NSSSLQKLFREVRIMKVLN- 71
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
PNIV+L E +++++LVME +GGE+FD ++A G E+ A + R IV + CH
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RK 257
++HRDLK EN LL D + +K DFG S + G GS Y APE+ + +K
Sbjct: 132 KFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 258 Y-GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLV 316
Y GPE D+WS+GV+LY L+ G PF ++ + +LRG P+ +S ++L+
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLL 244
Query: 317 KKMLNSDPKQRLTATEVLAHPWI 339
KK L +P +R T +++ W+
Sbjct: 245 KKFLILNPSKRGTLEQIMKDRWM 267
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 145/263 (55%), Gaps = 11/263 (4%)
Query: 79 ATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
Y K +G+G F L H TG++ A K I K +L N ++ + REV+IM L
Sbjct: 12 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILN- 69
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
PNIV+L E +++++L+ME +GGE+FD ++A G E+ A S R IV + CH
Sbjct: 70 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 129
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RK 257
++HRDLK EN LL D + +K DFG S + G GS Y APE+ + +K
Sbjct: 130 KRIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKK 186
Query: 258 Y-GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLV 316
Y GPE D+WS+GV+LY L+ G PF ++ + +LRG P+ +S ++L+
Sbjct: 187 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLL 242
Query: 317 KKMLNSDPKQRLTATEVLAHPWI 339
K+ L +P +R T +++ WI
Sbjct: 243 KRFLVLNPIKRGTLEQIMKDRWI 265
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 145/263 (55%), Gaps = 11/263 (4%)
Query: 79 ATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
Y K +G+G F L H TG++ A K I K +L N ++ + REV+IM L
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLN- 71
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
PNIV+L E +++++LVME +GGE+FD ++A G E+ A + R IV + CH
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RK 257
++HRDLK EN LL D + +K DFG S + G G+ Y APE+ + +K
Sbjct: 132 KFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 258 Y-GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLV 316
Y GPE D+WS+GV+LY L+ G PF ++ + +LRG P+ +S ++L+
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLL 244
Query: 317 KKMLNSDPKQRLTATEVLAHPWI 339
KK L +P +R T +++ W+
Sbjct: 245 KKFLILNPSKRGTLEQIMKDRWM 267
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 145/263 (55%), Gaps = 11/263 (4%)
Query: 79 ATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
Y K +G+G F L H TG++ A K I K +L N ++ + REV+IM L
Sbjct: 7 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLN- 64
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
PNIV+L E +++++LVME +GGE+FD ++A G E+ A + R IV + CH
Sbjct: 65 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RK 257
++HRDLK EN LL D + +K DFG S + G GS Y APE+ + +K
Sbjct: 125 KFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 181
Query: 258 Y-GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLV 316
Y GPE D+WS+GV+LY L+ G PF ++ + +LRG P+ +S ++L+
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLL 237
Query: 317 KKMLNSDPKQRLTATEVLAHPWI 339
KK L +P +R T +++ W+
Sbjct: 238 KKFLILNPSKRGTLEQIMKDRWM 260
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 158/321 (49%), Gaps = 52/321 (16%)
Query: 71 GRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL--VNKEDIEDVRR 128
G + +++ Y +G+G +G+ + T A K + K K+ +N +D+E ++
Sbjct: 18 GGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKT 77
Query: 129 EVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRI--------------IAK 174
EV++M L PNI L YED+Q + LVMELC GG L D++ + K
Sbjct: 78 EVRLMKKLH-HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVK 136
Query: 175 GHYT--------------------------ERAAASLLRTIVQIIHTCHSMGVIHRDLKP 208
E+ ++++R I +H H+ G+ HRD+KP
Sbjct: 137 TQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKP 196
Query: 209 ENFLLLNKDENSPLKATDFGLSV-FYK--QGEVF--KDIVGSAYYIAPEVLK---RKYGP 260
ENFL + +++ +K DFGLS FYK GE + G+ Y++APEVL YGP
Sbjct: 197 ENFLF-STNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255
Query: 261 EADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKML 320
+ D WS GV+L++LL G PF ++ + +L + F + + +SP A+DL+ +L
Sbjct: 256 KCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLL 315
Query: 321 NSDPKQRLTATEVLAHPWIKE 341
N + +R A L HPWI +
Sbjct: 316 NRNVDERFDAMRALQHPWISQ 336
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 145/263 (55%), Gaps = 11/263 (4%)
Query: 79 ATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
Y K +G+G F L H TG++ A K I K +L N ++ + REV+IM L
Sbjct: 15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILN- 72
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
PNIV+L E +++++L+ME +GGE+FD ++A G E+ A S R IV + CH
Sbjct: 73 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 132
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RK 257
++HRDLK EN LL D + +K DFG S + G G+ Y APE+ + +K
Sbjct: 133 KRIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKK 189
Query: 258 Y-GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLV 316
Y GPE D+WS+GV+LY L+ G PF ++ + +LRG P+ +S ++L+
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLL 245
Query: 317 KKMLNSDPKQRLTATEVLAHPWI 339
K+ L +P +R T +++ WI
Sbjct: 246 KRFLVLNPIKRGTLEQIMKDRWI 268
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 138/268 (51%), Gaps = 8/268 (2%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y +ELG G FG+ H T + TG FA K + ++ D E VR+E+Q M L P
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVM---TPHESDKETVRKEIQTMSVLR-HP 108
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAAASLLRTIVQIIHTCHSM 199
+V L A+ED + ++ E +GGELF+++ + +E A +R + + + H
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 168
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRK-Y 258
+H DLKPEN + K N LK DFGL+ + K G+A + APEV + K
Sbjct: 169 NYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV 227
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
G D+WS+GV+ YILL G+ PF E++ + + + IS KD ++K
Sbjct: 228 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRK 287
Query: 319 MLNSDPKQRLTATEVLAHPWIKEDGEAP 346
+L +DP R+T + L HPW+ G AP
Sbjct: 288 LLLADPNTRMTIHQALEHPWLTP-GNAP 314
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 138/268 (51%), Gaps = 8/268 (2%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y +ELG G FG+ H T + TG FA K + ++ D E VR+E+Q M L P
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVM---TPHESDKETVRKEIQTMSVLR-HP 214
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAAASLLRTIVQIIHTCHSM 199
+V L A+ED + ++ E +GGELF+++ + +E A +R + + + H
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 274
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRK-Y 258
+H DLKPEN + K N LK DFGL+ + K G+A + APEV + K
Sbjct: 275 NYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV 333
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
G D+WS+GV+ YILL G+ PF E++ + + + IS KD ++K
Sbjct: 334 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRK 393
Query: 319 MLNSDPKQRLTATEVLAHPWIKEDGEAP 346
+L +DP R+T + L HPW+ G AP
Sbjct: 394 LLLADPNTRMTIHQALEHPWLTP-GNAP 420
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 142/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L + + A K + K +L +RREV+I HL P
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR-HP 72
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR 132
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL N LK DFG SV + + G+ Y+ PE+++ R +
Sbjct: 133 VIHRDIKPENLLL---GSNGELKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHD 188
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G+PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR--VEFTFPDF--VTEGARDLISRL 244
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L + QRLT EVL HPWIK + P
Sbjct: 245 LKHNASQRLTLAEVLEHPWIKANSSKPS 272
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 142/267 (53%), Gaps = 10/267 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L + + A K + K +L +RREV+I HL P
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR-HP 72
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR 132
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL N LK DFG SV + + G+ Y+ PE+++ R +
Sbjct: 133 VIHRDIKPENLLL---GSNGELKIADFGWSV-HAPSSRRDTLCGTLDYLPPEMIEGRMHD 188
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G+PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR--VEFTFPDF--VTEGARDLISRL 244
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAP 346
L + QRLT EVL HPWIK + P
Sbjct: 245 LKHNASQRLTLAEVLEHPWIKANSSKP 271
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 148/279 (53%), Gaps = 12/279 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIE-DVRREVQIMHHLTGQ 139
+ G+ LG+G+FG +L K A K + K +L KE +E +RRE++I HL
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL-EKEGVEHQLRREIEIQSHLR-H 74
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSM 199
PNI+ + + D++ ++L++E GEL+ + G + E+ +A+ + + +H CH
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 134
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRK-Y 258
VIHRD+KPEN L+ K E LK DFG SV + + + G+ Y+ PE+++ K +
Sbjct: 135 KVIHRDIKPENLLMGYKGE---LKIADFGWSV-HAPSLRRRXMCGTLDYLPPEMIEGKTH 190
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
+ D+W GV+ Y L G+PPF + S I+ + F P +S +KDL+ K
Sbjct: 191 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISK 246
Query: 319 MLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSR 357
+L P QRL V+ HPW+K + P+ + S+
Sbjct: 247 LLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQSTQSK 285
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 141/267 (52%), Gaps = 10/267 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 94
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 95 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 154
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + D+ G+ Y+ PE+++ R +
Sbjct: 155 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRDDLCGTLDYLPPEMIEGRMHD 210
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 266
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAP 346
L +P QR EVL HPWI + P
Sbjct: 267 LKHNPSQRPMLREVLEHPWITANSSKP 293
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 148/279 (53%), Gaps = 12/279 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIE-DVRREVQIMHHLTGQ 139
+ G+ LG+G+FG +L K A K + K +L KE +E +RRE++I HL
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL-EKEGVEHQLRREIEIQSHLR-H 73
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSM 199
PNI+ + + D++ ++L++E GEL+ + G + E+ +A+ + + +H CH
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRK-Y 258
VIHRD+KPEN L+ K E LK DFG SV + + + G+ Y+ PE+++ K +
Sbjct: 134 KVIHRDIKPENLLMGYKGE---LKIADFGWSV-HAPSLRRRXMCGTLDYLPPEMIEGKTH 189
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
+ D+W GV+ Y L G+PPF + S I+ + F P +S +KDL+ K
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISK 245
Query: 319 MLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSR 357
+L P QRL V+ HPW+K + P+ + S+
Sbjct: 246 LLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQSTQSK 284
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 141/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E GE++ + + E+ A+ + + + CHS
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + + G+ Y+ PE+++ R +
Sbjct: 134 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHD 189
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 245
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 246 LKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 141/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E GE++ + + E+ A+ + + + CHS
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + + G+ Y+ PE+++ R +
Sbjct: 134 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLXGTLDYLPPEMIEGRMHD 189
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 245
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 246 LKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 141/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + D+ G+ Y+ PE+++ R +
Sbjct: 134 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRMHD 189
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 245
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 246 LKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 141/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + D+ G+ Y+ PE+++ R +
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRMHD 184
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 240
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 241 LKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 141/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + D+ G+ Y+ PE+++ R +
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRMHD 184
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 240
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 241 LKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 141/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 69
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + D+ G+ Y+ PE+++ R +
Sbjct: 130 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRMHD 185
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 241
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 242 LKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/264 (36%), Positives = 142/264 (53%), Gaps = 15/264 (5%)
Query: 79 ATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
Y K +G+G F L H TG++ A K I K +L N ++ + REV+I L
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIXKVLN- 71
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
PNIV+L E +++++LV E +GGE+FD ++A G E+ A + R IV + CH
Sbjct: 72 HPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQ 131
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RK 257
++HRDLK EN LLL+ D N +K DFG S + G G+ Y APE+ + +K
Sbjct: 132 KFIVHRDLKAEN-LLLDADXN--IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 258 Y-GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRG--HIDFTSDPWPSISPQAKD 314
Y GPE D+WS+GV+LY L+ G PF ++ + +LRG I F S ++
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYX------STDCEN 242
Query: 315 LVKKMLNSDPKQRLTATEVLAHPW 338
L+KK L +P +R T ++ W
Sbjct: 243 LLKKFLILNPSKRGTLEQIXKDRW 266
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 141/267 (52%), Gaps = 10/267 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + D+ G+ Y+ PE+++ R +
Sbjct: 132 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRDDLCGTLDYLPPEMIEGRMHD 187
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 243
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAP 346
L +P QR EVL HPWI + P
Sbjct: 244 LKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 141/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + ++ G+ Y+ PE+++ R +
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTELCGTLDYLPPEMIEGRMHD 184
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 240
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 241 LKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 94
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 95 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 154
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + + G+ Y+ PE+++ R +
Sbjct: 155 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHD 210
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 266
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 267 LKHNPSQRPMLREVLEHPWITANSSKPS 294
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 85
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 86 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 145
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + + G+ Y+ PE+++ R +
Sbjct: 146 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHD 201
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 202 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 257
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 258 LKHNPSQRPMLREVLEHPWITANSSKPS 285
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 126/220 (57%), Gaps = 7/220 (3%)
Query: 79 ATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
Y K +G+G F L H TG++ A K I K +L N ++ + REV+IM L
Sbjct: 15 GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQL-NPTSLQKLFREVRIMKILN- 72
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
PNIV+L E +++++LVME +GGE+FD ++A G E+ A + R IV + CH
Sbjct: 73 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 132
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RK 257
++HRDLK EN LLL+ D N +K DFG S + G GS Y APE+ + +K
Sbjct: 133 KYIVHRDLKAEN-LLLDGDMN--IKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKK 189
Query: 258 Y-GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRG 296
Y GPE D+WS+GV+LY L+ G PF ++ + +LRG
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG 229
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 69 NILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKK 128
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + + G+ Y+ PE+++ R +
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGRMHD 184
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISR--VEFTFPDF--VTEGARDLISRL 240
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 241 LKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 70
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 71 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 130
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + + G+ Y+ PE+++ R +
Sbjct: 131 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGRMHD 186
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 242
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 243 LKHNPSQRPMLREVLEHPWITANSSKPS 270
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + + G+ Y+ PE+++ R +
Sbjct: 132 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHD 187
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 243
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 244 LKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + + G+ Y+ PE+++ R +
Sbjct: 134 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHD 189
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 245
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 246 LKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + + G+ Y+ PE+++ R +
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHD 184
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 240
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 241 LKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 147/279 (52%), Gaps = 12/279 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIE-DVRREVQIMHHLTGQ 139
+ + LG+G+FG +L K A K + K +L KE +E +RRE++I HL
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL-EKEGVEHQLRREIEIQSHLR-H 73
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSM 199
PNI+ + + D++ ++L++E GEL+ + G + E+ +A+ + + +H CH
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRK-Y 258
VIHRD+KPEN L+ K E LK DFG SV + + + G+ Y+ PE+++ K +
Sbjct: 134 KVIHRDIKPENLLMGYKGE---LKIADFGWSV-HAPSLRRRXMCGTLDYLPPEMIEGKTH 189
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
+ D+W GV+ Y L G+PPF + S I+ + F P +S +KDL+ K
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISK 245
Query: 319 MLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSR 357
+L P QRL V+ HPW+K + P+ + S+
Sbjct: 246 LLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQSTQSK 284
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + + G+ Y+ PE+++ R +
Sbjct: 132 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGRMHD 187
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 243
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 244 LKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 148/276 (53%), Gaps = 9/276 (3%)
Query: 72 RPMEDVKATYSF-GKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREV 130
+ ME+ Y KELGRG+F + C K TGQ++A K + KR+ ++ ++ E+
Sbjct: 21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-GQDCRAEILHEI 79
Query: 131 QIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRT 188
++ P ++ L YE+ + L++E AGGE+F + + +E L++
Sbjct: 80 AVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQ 139
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYY 248
I++ ++ H ++H DLKP+N LL + +K DFG+S ++I+G+ Y
Sbjct: 140 ILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEY 199
Query: 249 IAPEVLKRKYGP---EADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPW 305
+APE+L Y P D+W+IG++ Y+LL PF E + I + ++D++ + +
Sbjct: 200 LAPEILN--YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETF 257
Query: 306 PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
S+S A D ++ +L +P++R TA L+H W+++
Sbjct: 258 SSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 69
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + + G+ Y+ PE+++ R +
Sbjct: 130 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRDTLCGTLDYLPPEMIEGRMHD 185
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 241
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 242 LKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 139/268 (51%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + + G+ Y+ PE ++ R +
Sbjct: 134 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEXIEGRXHD 189
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 245
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 246 LKHNPSQRPXLREVLEHPWITANSSKPS 273
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 72
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 132
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + + G+ Y+ PE+++ R +
Sbjct: 133 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHD 188
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 189 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 244
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 245 LKHNPSQRPMLREVLEHPWITANSSKPS 272
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 67
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 68 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 127
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + + G+ Y+ PE+++ R +
Sbjct: 128 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHD 183
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 184 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 239
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 240 LKHNPSQRPMLREVLEHPWITANSSKPS 267
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + + G+ Y+ PE+++ R +
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTXLCGTLDYLPPEMIEGRMHD 184
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 240
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 241 LKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + + G+ Y+ PE+++ R +
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGRMHD 184
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 240
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 241 LKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + + G+ Y+ PE+++ R +
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGRMHD 184
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 240
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 241 LKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 155/296 (52%), Gaps = 26/296 (8%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K++G G FG+ L K + + A K I + + ++ E+V+RE+ I H P
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREI-INHRSLRHP 74
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NIV K + +VME +GGELF+RI G ++E A + ++ + CH+M
Sbjct: 75 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 134
Query: 201 VIHRDLKPENFLLLNKDENSP---LKATDFGL---SVFYKQGEVFKDIVGSAYYIAPEV- 253
V HRDLK EN LL + SP LK DFG SV + Q K VG+ YIAPEV
Sbjct: 135 VCHRDLKLENTLL----DGSPAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVL 187
Query: 254 LKRKY-GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRG--HIDFTSDPWPSISP 310
LK++Y G AD+WS GV LY++L G PF E F + ++ + + ISP
Sbjct: 188 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 247
Query: 311 QAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLKQFKAMNK 366
+ + L+ ++ +DP +R++ E+ H W ++ A D+ DN + + QF A ++
Sbjct: 248 ECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPA-DLMNDNTMTT---QFAASDQ 299
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 147/290 (50%), Gaps = 34/290 (11%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LG G C + T Q++A K I K+ + V REV++++ G N++EL
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSR---VFREVEMLYQCQGHRNVLELI 77
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRDL 206
+E++ +LV E GG + I + H+ E A+ +++ + + H+ G+ HRDL
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDL 137
Query: 207 KPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDI--------VGSAYYIAPEVLK--- 255
KPEN L + ++ SP+K DFGL K I GSA Y+APEV++
Sbjct: 138 KPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 256 ---RKYGPEADIWSIGVMLYILLCGVPPF---------WAESE------HGIFNAILRGH 297
Y D+WS+GV+LYILL G PPF W E + +F +I G
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGK 257
Query: 298 IDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPD 347
+F W IS AKDL+ K+L D KQRL+A +VL HPW++ G AP+
Sbjct: 258 YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ--GCAPE 305
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 140/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 70
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 71 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 130
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK +FG SV + + G+ Y+ PE+++ R +
Sbjct: 131 VIHRDIKPENLLLGSAGE---LKIANFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHD 186
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 242
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 243 LKHNPSQRPMLREVLEHPWITANSSKPS 270
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 159/306 (51%), Gaps = 23/306 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K++G G FG+ L K + + A K I + + ++ E+V+RE+ I H P
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREI-INHRSLRHP 75
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NIV K + +VME +GGELF+RI G ++E A + ++ + CH+M
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 201 VIHRDLKPENFLLLNKDENSP---LKATDFGL---SVFYKQGEVFKDIVGSAYYIAPEV- 253
V HRDLK EN LL + SP LK FG SV + Q KD VG+ YIAPEV
Sbjct: 136 VCHRDLKLENTLL----DGSPAPRLKICAFGYSKSSVLHSQP---KDTVGTPAYIAPEVL 188
Query: 254 LKRKY-GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRG--HIDFTSDPWPSISP 310
LK++Y G AD+WS GV LY++L G PF E F + ++ + + ISP
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 311 QAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLKQFKAMNKFKKV 370
+ + L+ ++ +DP +R++ E+ H W ++ A D+ DN + ++ + + +
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPA-DLMNDNTMTTQFDESDQPGQSIEE 307
Query: 371 ALRVIA 376
+++IA
Sbjct: 308 IMQIIA 313
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 140/268 (52%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK +FG SV + + G+ Y+ PE+++ R +
Sbjct: 132 VIHRDIKPENLLLGSAGE---LKIANFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHD 187
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 243
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 244 LKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 139/268 (51%), Gaps = 10/268 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 69
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG S + + G+ Y+ PE+++ R +
Sbjct: 130 VIHRDIKPENLLLGSAGE---LKIADFGWSC-HAPSSRRTTLSGTLDYLPPEMIEGRMHD 185
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 241
Query: 320 LNSDPKQRLTATEVLAHPWIKEDGEAPD 347
L +P QR EVL HPWI + P
Sbjct: 242 LKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 138/260 (53%), Gaps = 10/260 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + + G+ Y+ PE+++ R +
Sbjct: 132 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHD 187
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 243
Query: 320 LNSDPKQRLTATEVLAHPWI 339
L +P QR EVL HPWI
Sbjct: 244 LKHNPSQRPMLREVLEHPWI 263
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 138/260 (53%), Gaps = 10/260 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K + A K + K +L +RREV+I HL P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + + G+ Y+ PE+++ R +
Sbjct: 132 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGRMHD 187
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 243
Query: 320 LNSDPKQRLTATEVLAHPWI 339
L +P QR EVL HPWI
Sbjct: 244 LKHNPSQRPMLREVLEHPWI 263
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 158/306 (51%), Gaps = 23/306 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K++G G FG+ L K + + A K I + + ++ E+V+RE+ I H P
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREI-INHRSLRHP 75
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NIV K + +VME +GGELF+RI G ++E A + ++ + CH+M
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 201 VIHRDLKPENFLLLNKDENSP---LKATDFGL---SVFYKQGEVFKDIVGSAYYIAPEV- 253
V HRDLK EN LL + SP LK FG SV + Q K VG+ YIAPEV
Sbjct: 136 VCHRDLKLENTLL----DGSPAPRLKICAFGYSKSSVLHSQP---KSTVGTPAYIAPEVL 188
Query: 254 LKRKY-GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRG--HIDFTSDPWPSISP 310
LK++Y G AD+WS GV LY++L G PF E F + ++ + + ISP
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 311 QAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLKQFKAMNKFKKV 370
+ + L+ ++ +DP +R++ E+ H W ++ A D+ DN + ++ + + +
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPA-DLMNDNTMTTQFDESDQPGQSIEE 307
Query: 371 ALRVIA 376
+++IA
Sbjct: 308 IMQIIA 313
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 146/290 (50%), Gaps = 34/290 (11%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LG G C + T Q++A K I K+ + V REV++++ G N++EL
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSR---VFREVEMLYQCQGHRNVLELI 77
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRDL 206
+E++ +LV E GG + I + H+ E A+ +++ + + H+ G+ HRDL
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDL 137
Query: 207 KPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDI--------VGSAYYIAPEVLK--- 255
KPEN L + ++ SP+K DF L K I GSA Y+APEV++
Sbjct: 138 KPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 256 ---RKYGPEADIWSIGVMLYILLCGVPPF---------WAESE------HGIFNAILRGH 297
Y D+WS+GV+LYILL G PPF W E + +F +I G
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGK 257
Query: 298 IDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPD 347
+F W IS AKDL+ K+L D KQRL+A +VL HPW++ G AP+
Sbjct: 258 YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ--GCAPE 305
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 137/260 (52%), Gaps = 10/260 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ G+ LG+G+FG +L K A K + K +L +RREV+I HL P
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 65
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NI+ L G + D V+L++E G ++ + + E+ A+ + + + CHS
Sbjct: 66 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 125
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
VIHRD+KPEN LL + E LK DFG SV + + G+ Y+ PE+++ R +
Sbjct: 126 VIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHD 181
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS+GV+ Y L G PPF A + + I R ++FT + ++ A+DL+ ++
Sbjct: 182 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDF--VTEGARDLISRL 237
Query: 320 LNSDPKQRLTATEVLAHPWI 339
L +P QR EVL HPWI
Sbjct: 238 LKHNPSQRPMLREVLEHPWI 257
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 150/290 (51%), Gaps = 23/290 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K++G G FG+ L K + + A K I + + + +V+RE+ I H P
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAA----NVKREI-INHRSLRHP 75
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NIV K + +VME +GGELF+RI G ++E A + ++ + CH+M
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 201 VIHRDLKPENFLLLNKDENSP---LKATDFGL---SVFYKQGEVFKDIVGSAYYIAPEV- 253
V HRDLK EN LL + SP LK DFG SV + Q K VG+ YIAPEV
Sbjct: 136 VCHRDLKLENTLL----DGSPAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVL 188
Query: 254 LKRKY-GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRG--HIDFTSDPWPSISP 310
LK++Y G AD+WS GV LY++L G PF E F + ++ + + ISP
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 311 QAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLKQ 360
+ + L+ ++ +DP +R++ E+ H W ++ A D+ DN + ++ +
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPA-DLMNDNTMTTQFDE 297
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 141/266 (53%), Gaps = 8/266 (3%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y ++LGRG+FGI H C + + + K + V D V++E+ I++ +
Sbjct: 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVK----VKGTDQVLVKKEISILN-IARHR 61
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRI-IAKGHYTERAAASLLRTIVQIIHTCHSM 199
NI+ L ++E + + ++ E +G ++F+RI + ER S + + + + HS
Sbjct: 62 NILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRKYG 259
+ H D++PEN ++ +S +K +FG + K G+ F+ + + Y APEV +
Sbjct: 122 NIGHFDIRPEN-IIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVV 180
Query: 260 PEA-DIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
A D+WS+G ++Y+LL G+ PF AE+ I I+ F + + IS +A D V +
Sbjct: 181 STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDR 240
Query: 319 MLNSDPKQRLTATEVLAHPWIKEDGE 344
+L + K R+TA+E L HPW+K+ E
Sbjct: 241 LLVKERKSRMTASEALQHPWLKQKIE 266
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 72/113 (63%), Positives = 82/113 (72%)
Query: 359 KQFKAMNKFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKL 418
KQF A NKFKK ALRVIA LSEEEI GLKE F ID D SG IT EELK GL + G L
Sbjct: 1 KQFSAXNKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANL 60
Query: 419 SEYEAKQLMEAADADGNGTIDYHEFITATMHLNRMDREEHLYTAFQHFDKDNS 471
E E L +AAD D +GTIDY EFI AT+HLN+++RE+HL+ AF +FDKD S
Sbjct: 61 KESEILDLXQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGS 113
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 391 FKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTIDYHEFIT 445
F D D SG IT +EL+Q + G + + ++L D D +G IDY+EF+
Sbjct: 105 FTYFDKDGSGYITPDELQQACEEFG--VEDVRIEELXRDVDQDNDGRIDYNEFVA 157
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 150/290 (51%), Gaps = 23/290 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K++G G FG+ L K + A K I + + ++ E+V+RE+ I H P
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKID----ENVKREI-INHRSLRHP 75
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NIV K + +VME +GGELF+RI G ++E A + ++ + H+M
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ 135
Query: 201 VIHRDLKPENFLLLNKDENSP---LKATDFGL---SVFYKQGEVFKDIVGSAYYIAPEV- 253
V HRDLK EN LL + SP LK DFG SV + Q K VG+ YIAPEV
Sbjct: 136 VAHRDLKLENTLL----DGSPAPRLKIADFGYSKASVLHSQP---KSAVGTPAYIAPEVL 188
Query: 254 LKRKY-GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRG--HIDFTSDPWPSISP 310
LK++Y G AD+WS GV LY++L G PF E F + ++ + + ISP
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 311 QAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLKQ 360
+ + L+ ++ +DP +R++ E+ H W ++ A D+ DN + ++ +
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPA-DLMNDNTMTTQFDE 297
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 144/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK +G +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 92
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME AGGE+F + G ++E A IV HS+ +I+R
Sbjct: 93 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 152
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ DE ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 153 DLKPENLLI---DEQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 207
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 208 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 263
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 264 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 303
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 144/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK +G +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME AGGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LAGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 139/271 (51%), Gaps = 20/271 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ FGK LG G F T L T +++A K + KR ++ + + V RE +M L P
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 90
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
V+L ++D + ++ + GEL I G + E IV + H G
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFG----LSVFYKQGEVFKDIVGSAYYIAPEVLKR 256
+IHRDLKPEN LL +E+ ++ TDFG LS KQ VG+A Y++PE+L
Sbjct: 151 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTE 206
Query: 257 KYG-PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
K +D+W++G ++Y L+ G+PPF A +E+ IF I++ DF P+A+DL
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE----KFFPKARDL 262
Query: 316 VKKMLNSDPKQRLTATE------VLAHPWIK 340
V+K+L D +RL E + AHP+ +
Sbjct: 263 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 143/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK TG FA K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 146/265 (55%), Gaps = 12/265 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIE-DVRREVQIMHHLTGQ 139
+ G+ LG+G+FG +L K + A K + K + + KE +E +RRE++I HL
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQ-IEKEGVEHQLRREIEIQAHL-HH 82
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSM 199
PNI+ L + D++ ++L++E GEL+ + + E+ A+++ + + CH
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKY 258
VIHRD+KPEN LL K E DFG SV + K + G+ Y+ PE+++ R +
Sbjct: 143 KVIHRDIKPENLLLGLKGELK---IADFGWSV-HAPSLRRKTMCGTLDYLPPEMIEGRMH 198
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
+ D+W IGV+ Y LL G PPF + S + + I++ + F + S+ A+DL+ K
Sbjct: 199 NEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPA----SVPTGAQDLISK 254
Query: 319 MLNSDPKQRLTATEVLAHPWIKEDG 343
+L +P +RL +V AHPW++ +
Sbjct: 255 LLRHNPSERLPLAQVSAHPWVRANS 279
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 144/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK +G +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME AGGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 143/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK TG FA K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 143/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK TG FA K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 144/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK +G +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME AGGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LXGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 144/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK +G +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME AGGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 137/263 (52%), Gaps = 15/263 (5%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + K LG+G FG L K TG+ +A K + K ++ K+++ E +++ + T P
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHP 65
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+ LK A++ + VME GGELF + + +TE A IV + HS
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGL-SVFYKQGEVFKDIVGSAYYIAPEVLK-RKY 258
V++RD+K EN +L D++ +K TDFGL G K G+ Y+APEVL+ Y
Sbjct: 126 VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
G D W +GV++Y ++CG PF+ + +F IL I F ++SP+AK L+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAG 238
Query: 319 MLNSDPKQRL-----TATEVLAH 336
+L DPKQRL A EV+ H
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 144/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK +G +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME AGGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 137/263 (52%), Gaps = 15/263 (5%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + K LG+G FG L K TG+ +A K + K ++ K+++ E +++ + T P
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHP 70
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+ LK A++ + VME GGELF + + +TE A IV + HS
Sbjct: 71 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 130
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGL-SVFYKQGEVFKDIVGSAYYIAPEVLK-RKY 258
V++RD+K EN +L D++ +K TDFGL G K G+ Y+APEVL+ Y
Sbjct: 131 VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 187
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
G D W +GV++Y ++CG PF+ + +F IL I F ++SP+AK L+
Sbjct: 188 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAG 243
Query: 319 MLNSDPKQRL-----TATEVLAH 336
+L DPKQRL A EV+ H
Sbjct: 244 LLKKDPKQRLGGGPSDAKEVMEH 266
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 144/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK +G +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME AGGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 144/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK +G +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME AGGE+F + G ++E A IV HS+ +I+R
Sbjct: 107 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 144/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK +G +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME AGGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLPNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 138/266 (51%), Gaps = 15/266 (5%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + K LG+G FG L K TG+ +A K + K ++ K+++ E +++ + T P
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHP 68
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+ LK A++ + VME GGELF + + +TE A IV + HS
Sbjct: 69 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 128
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGL-SVFYKQGEVFKDIVGSAYYIAPEVLK-RKY 258
V++RD+K EN +L D++ +K TDFGL G K G+ Y+APEVL+ Y
Sbjct: 129 VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 185
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
G D W +GV++Y ++CG PF+ + +F IL I F ++SP+AK L+
Sbjct: 186 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAG 241
Query: 319 MLNSDPKQRL-----TATEVLAHPWI 339
+L DPKQRL A EV+ H +
Sbjct: 242 LLKKDPKQRLGGGPSDAKEVMEHRFF 267
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ FGK LG G F L T +++A K + KR ++ + + V RE +M L P
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 95
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
V+L ++D + ++ + GEL I G + E IV + H G
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 155
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFG----LSVFYKQGEVFKDIVGSAYYIAPEVLKR 256
+IHRDLKPEN LL +E+ ++ TDFG LS KQ VG+A Y++PE+L
Sbjct: 156 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTE 211
Query: 257 KYG-PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
K +D+W++G ++Y L+ G+PPF A +E+ IF I++ DF + + P+A+DL
Sbjct: 212 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPA----AFFPKARDL 267
Query: 316 VKKMLNSDPKQRLTATE------VLAHPWIK 340
V+K+L D +RL E + AHP+ +
Sbjct: 268 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 298
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 138/266 (51%), Gaps = 15/266 (5%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + K LG+G FG L K TG+ +A K + K ++ K+++ E +++ + T P
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHP 65
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+ LK A++ + VME GGELF + + +TE A IV + HS
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGL-SVFYKQGEVFKDIVGSAYYIAPEVLK-RKY 258
V++RD+K EN +L D++ +K TDFGL G K G+ Y+APEVL+ Y
Sbjct: 126 VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
G D W +GV++Y ++CG PF+ + +F IL I F ++SP+AK L+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAG 238
Query: 319 MLNSDPKQRL-----TATEVLAHPWI 339
+L DPKQRL A EV+ H +
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 143/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G ++E A IV HS+ +I+R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 278 LTKRFGNLKNGVNDIXNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 138/266 (51%), Gaps = 15/266 (5%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + K LG+G FG L K TG+ +A K + K ++ K+++ E +++ + T P
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHP 65
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+ LK A++ + VME GGELF + + +TE A IV + HS
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSAYYIAPEVLK-RKY 258
V++RD+K EN +L D++ +K TDFGL G K G+ Y+APEVL+ Y
Sbjct: 126 VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 182
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
G D W +GV++Y ++CG PF+ + +F IL I F ++SP+AK L+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAG 238
Query: 319 MLNSDPKQRL-----TATEVLAHPWI 339
+L DPKQRL A EV+ H +
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 142/280 (50%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK +G +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 126
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME AGGE+F + G ++E A IV HS+ +I+R
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K + G+ Y+APE +L + Y D
Sbjct: 187 DLKPENLLI---DQQGYIQVTDFGFAKRVKGATW--TLCGTPEYLAPEIILSKGYNKAVD 241
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 297
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 298 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 337
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 138/266 (51%), Gaps = 15/266 (5%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + K LG+G FG L K TG+ +A K + K ++ K+++ E +++ + T P
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHP 65
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+ LK A++ + VME GGELF + + +TE A IV + HS
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGL-SVFYKQGEVFKDIVGSAYYIAPEVLK-RKY 258
V++RD+K EN +L D++ +K TDFGL G K G+ Y+APEVL+ Y
Sbjct: 126 VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
G D W +GV++Y ++CG PF+ + +F IL I F ++SP+AK L+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAG 238
Query: 319 MLNSDPKQRL-----TATEVLAHPWI 339
+L DPKQRL A EV+ H +
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 143/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G ++E A IV HS+ +I+R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN ++ D+ +K TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 138/266 (51%), Gaps = 15/266 (5%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + K LG+G FG L K TG+ +A K + K ++ K+++ E +++ + T P
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHP 65
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+ LK A++ + VME GGELF + + +TE A IV + HS
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGL-SVFYKQGEVFKDIVGSAYYIAPEVLK-RKY 258
V++RD+K EN +L D++ +K TDFGL G K G+ Y+APEVL+ Y
Sbjct: 126 VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 182
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
G D W +GV++Y ++CG PF+ + +F IL I F ++SP+AK L+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAG 238
Query: 319 MLNSDPKQRL-----TATEVLAHPWI 339
+L DPKQRL A EV+ H +
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 143/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK +G +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME AGGE+F + G + E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 143/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK +G +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 100
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME AGGE+F + G + E A IV HS+ +I+R
Sbjct: 101 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 160
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 161 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 215
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 216 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 271
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 272 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 311
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 143/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK +G +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME AGGE+F + G + E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 144/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L H TG +A K + K+K+V ++IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN ++ D+ +K TDFGL+ K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLMI---DQQGYIKVTDFGLAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 20/271 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ FGK LG G F L T +++A K + KR ++ + + V RE +M L P
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 89
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
V+L ++D + ++ + GEL I G + E IV + H G
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFG----LSVFYKQGEVFKDIVGSAYYIAPEVLKR 256
+IHRDLKPEN LL +E+ ++ TDFG LS KQ VG+A Y++PE+L
Sbjct: 150 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARA-NSFVGTAQYVSPELLTE 205
Query: 257 KYG-PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
K +D+W++G ++Y L+ G+PPF A +E+ IF I++ DF P+A+DL
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE----KFFPKARDL 261
Query: 316 VKKMLNSDPKQRLTATE------VLAHPWIK 340
V+K+L D +RL E + AHP+ +
Sbjct: 262 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 292
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 143/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G ++E A IV HS+ +I+R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 143/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK +G +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 126
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME AGGE+F + G + E A IV HS+ +I+R
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 187 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 241
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 297
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 298 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 337
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 143/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK +G +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME AGGE+F + G + E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 143/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G ++E A IV HS+ +I+R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 143/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK +G +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME AGGE+F + G + E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 141/280 (50%), Gaps = 20/280 (7%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
+P + + FGK LG G F L T +++A K + KR ++ + + V RE
Sbjct: 1 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 60
Query: 132 IMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQ 191
+M L P V+L ++D + ++ + GEL I G + E IV
Sbjct: 61 VMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS 119
Query: 192 IIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFG----LSVFYKQGEVFKDIVGSAY 247
+ H G+IHRDLKPEN LL +E+ ++ TDFG LS KQ VG+A
Sbjct: 120 ALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQ 175
Query: 248 YIAPEVLKRKYG-PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
Y++PE+L K +D+W++G ++Y L+ G+PPF A +E+ IF I++ DF
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE---- 231
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATE------VLAHPWIK 340
P+A+DLV+K+L D +RL E + AHP+ +
Sbjct: 232 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 271
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 137/268 (51%), Gaps = 22/268 (8%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y F K++G G FG+ L K T + A K I + ++ E+V+RE+ I H P
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID----ENVQREI-INHRSLRHP 76
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
NIV K + ++ME +GGEL++RI G ++E A + ++ + CHSM
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ 136
Query: 201 VIHRDLKPENFLLLNKDENSP---LKATDFGL---SVFYKQGEVFKDIVGSAYYIAPEVL 254
+ HRDLK EN LL + SP LK DFG SV + Q K VG+ YIAPEVL
Sbjct: 137 ICHRDLKLENTLL----DGSPAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVL 189
Query: 255 KRKY--GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRG--HIDFTSDPWPSISP 310
R+ G AD+WS GV LY++L G PF E + ++ + ++ ISP
Sbjct: 190 LRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISP 249
Query: 311 QAKDLVKKMLNSDPKQRLTATEVLAHPW 338
+ L+ ++ +DP R++ E+ H W
Sbjct: 250 ECCHLISRIFVADPATRISIPEIKTHSW 277
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 20/271 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ FGK LG G F L T +++A K + KR ++ + + V RE +M L P
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 93
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
V+L ++D + ++ + GEL I G + E IV + H G
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFG----LSVFYKQGEVFKDIVGSAYYIAPEVLKR 256
+IHRDLKPEN LL +E+ ++ TDFG LS KQ VG+A Y++PE+L
Sbjct: 154 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARA-NSFVGTAQYVSPELLTE 209
Query: 257 KYG-PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
K +D+W++G ++Y L+ G+PPF A +E+ IF I++ DF P+A+DL
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE----KFFPKARDL 265
Query: 316 VKKMLNSDPKQRLTATE------VLAHPWIK 340
V+K+L D +RL E + AHP+ +
Sbjct: 266 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 296
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 141/280 (50%), Gaps = 20/280 (7%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
+P + + FGK LG G F L T +++A K + KR ++ + + V RE
Sbjct: 2 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 61
Query: 132 IMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQ 191
+M L P V+L ++D + ++ + GEL I G + E IV
Sbjct: 62 VMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS 120
Query: 192 IIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFG----LSVFYKQGEVFKDIVGSAY 247
+ H G+IHRDLKPEN LL +E+ ++ TDFG LS KQ VG+A
Sbjct: 121 ALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQ 176
Query: 248 YIAPEVLKRKYG-PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
Y++PE+L K +D+W++G ++Y L+ G+PPF A +E+ IF I++ DF
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE---- 232
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATE------VLAHPWIK 340
P+A+DLV+K+L D +RL E + AHP+ +
Sbjct: 233 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 272
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 20/271 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ FGK LG G F L T +++A K + KR ++ + + V RE +M L P
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 67
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
V+L ++D + ++ + GEL I G + E IV + H G
Sbjct: 68 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 127
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFG----LSVFYKQGEVFKDIVGSAYYIAPEVLKR 256
+IHRDLKPEN LL +E+ ++ TDFG LS KQ VG+A Y++PE+L
Sbjct: 128 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTE 183
Query: 257 KYG-PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
K +D+W++G ++Y L+ G+PPF A +E+ IF I++ DF P+A+DL
Sbjct: 184 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE----KFFPKARDL 239
Query: 316 VKKMLNSDPKQRLTATE------VLAHPWIK 340
V+K+L D +RL E + AHP+ +
Sbjct: 240 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 270
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 143/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 98
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G ++E A IV HS+ +I+R
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 158
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 159 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 213
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 214 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 269
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 270 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 309
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 143/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L H TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME AGGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 141/280 (50%), Gaps = 20/280 (7%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
+P + + FGK LG G F L T +++A K + KR ++ + + V RE
Sbjct: 3 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 62
Query: 132 IMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQ 191
+M L P V+L ++D + ++ + GEL I G + E IV
Sbjct: 63 VMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS 121
Query: 192 IIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFG----LSVFYKQGEVFKDIVGSAY 247
+ H G+IHRDLKPEN LL +E+ ++ TDFG LS KQ VG+A
Sbjct: 122 ALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQ 177
Query: 248 YIAPEVLKRKYG-PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
Y++PE+L K +D+W++G ++Y L+ G+PPF A +E+ IF I++ DF
Sbjct: 178 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE---- 233
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATE------VLAHPWIK 340
P+A+DLV+K+L D +RL E + AHP+ +
Sbjct: 234 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 273
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 143/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 126
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G ++E A IV HS+ +I+R
Sbjct: 127 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 187 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 241
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 297
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 298 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 337
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 20/271 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ FGK LG G F L T +++A K + KR ++ + + V RE +M L P
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 89
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
V+L ++D + ++ + GEL I G + E IV + H G
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFG----LSVFYKQGEVFKDIVGSAYYIAPEVLKR 256
+IHRDLKPEN LL +E+ ++ TDFG LS KQ VG+A Y++PE+L
Sbjct: 150 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTE 205
Query: 257 KYG-PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
K +D+W++G ++Y L+ G+PPF A +E+ IF I++ DF P+A+DL
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE----KFFPKARDL 261
Query: 316 VKKMLNSDPKQRLTATE------VLAHPWIK 340
V+K+L D +RL E + AHP+ +
Sbjct: 262 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 292
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 20/271 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ FGK LG G F L T +++A K + KR ++ + + V RE +M L P
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 90
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
V+L ++D + ++ + GEL I G + E IV + H G
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFG----LSVFYKQGEVFKDIVGSAYYIAPEVLKR 256
+IHRDLKPEN LL +E+ ++ TDFG LS KQ VG+A Y++PE+L
Sbjct: 151 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTE 206
Query: 257 KYG-PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
K +D+W++G ++Y L+ G+PPF A +E+ IF I++ DF P+A+DL
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE----KFFPKARDL 262
Query: 316 VKKMLNSDPKQRLTATE------VLAHPWIK 340
V+K+L D +RL E + AHP+ +
Sbjct: 263 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 20/271 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ FGK LG G F L T +++A K + KR ++ + + V RE +M L P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
V+L ++D + ++ + GEL I G + E IV + H G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFG----LSVFYKQGEVFKDIVGSAYYIAPEVLKR 256
+IHRDLKPEN LL +E+ ++ TDFG LS KQ VG+A Y++PE+L
Sbjct: 153 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTE 208
Query: 257 KYG-PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
K +D+W++G ++Y L+ G+PPF A +E+ IF I++ DF P+A+DL
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE----KFFPKARDL 264
Query: 316 VKKMLNSDPKQRLTATE------VLAHPWIK 340
V+K+L D +RL E + AHP+ +
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 20/271 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ FGK LG G F L T +++A K + KR ++ + + V RE +M L P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
V+L ++D + ++ + GEL I G + E IV + H G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFG----LSVFYKQGEVFKDIVGSAYYIAPEVLKR 256
+IHRDLKPEN LL +E+ ++ TDFG LS KQ VG+A Y++PE+L
Sbjct: 153 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTE 208
Query: 257 KYG-PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
K +D+W++G ++Y L+ G+PPF A +E+ IF I++ DF P+A+DL
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE----KFFPKARDL 264
Query: 316 VKKMLNSDPKQRLTATE------VLAHPWIK 340
V+K+L D +RL E + AHP+ +
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 20/271 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ FGK LG G F L T +++A K + KR ++ + + V RE +M L P
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 90
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
V+L ++D + ++ + GEL I G + E IV + H G
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFG----LSVFYKQGEVFKDIVGSAYYIAPEVLKR 256
+IHRDLKPEN LL +E+ ++ TDFG LS KQ VG+A Y++PE+L
Sbjct: 151 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTE 206
Query: 257 KYG-PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
K +D+W++G ++Y L+ G+PPF A +E+ IF I++ DF P+A+DL
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE----KFFPKARDL 262
Query: 316 VKKMLNSDPKQRLTATE------VLAHPWIK 340
V+K+L D +RL E + AHP+ +
Sbjct: 263 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 20/271 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ FGK LG G F L T +++A K + KR ++ + + V RE +M L P
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 97
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
V+L ++D + ++ + GEL I G + E IV + H G
Sbjct: 98 FFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 157
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFG----LSVFYKQGEVFKDIVGSAYYIAPEVLKR 256
+IHRDLKPEN LL +E+ ++ TDFG LS KQ VG+A Y++PE+L
Sbjct: 158 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTE 213
Query: 257 KYG-PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
K +D+W++G ++Y L+ G+PPF A +E+ IF I++ DF P+A+DL
Sbjct: 214 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE----KFFPKARDL 269
Query: 316 VKKMLNSDPKQRLTATE------VLAHPWIK 340
V+K+L D +RL E + AHP+ +
Sbjct: 270 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 300
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 20/271 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ FGK LG G F L T +++A K + KR ++ + + V RE +M L P
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 90
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
V+L ++D + ++ + GEL I G + E IV + H G
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFG----LSVFYKQGEVFKDIVGSAYYIAPEVLKR 256
+IHRDLKPEN LL +E+ ++ TDFG LS KQ VG+A Y++PE+L
Sbjct: 151 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARA-NAFVGTAQYVSPELLTE 206
Query: 257 KYG-PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
K +D+W++G ++Y L+ G+PPF A +E+ IF I++ DF P+A+DL
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE----KFFPKARDL 262
Query: 316 VKKMLNSDPKQRLTATE------VLAHPWIK 340
V+K+L D +RL E + AHP+ +
Sbjct: 263 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 20/271 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ FGK LG G F L T +++A K + KR ++ + + V RE +M L P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
V+L ++D + ++ + GEL I G + E IV + H G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFG----LSVFYKQGEVFKDIVGSAYYIAPEVLKR 256
+IHRDLKPEN LL +E+ ++ TDFG LS KQ VG+A Y++PE+L
Sbjct: 153 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTE 208
Query: 257 KYG-PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
K +D+W++G ++Y L+ G+PPF A +E+ IF I++ DF P+A+DL
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE----KFFPKARDL 264
Query: 316 VKKMLNSDPKQRLTATE------VLAHPWIK 340
V+K+L D +RL E + AHP+ +
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 20/271 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ FGK LG G F L T +++A K + KR ++ + + V RE +M L P
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 93
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
V+L ++D + ++ + GEL I G + E IV + H G
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFG----LSVFYKQGEVFKDIVGSAYYIAPEVLKR 256
+IHRDLKPEN LL +E+ ++ TDFG LS KQ VG+A Y++PE+L
Sbjct: 154 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTE 209
Query: 257 KYG-PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
K +D+W++G ++Y L+ G+PPF A +E+ IF I++ DF P+A+DL
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE----KFFPKARDL 265
Query: 316 VKKMLNSDPKQRLTATE------VLAHPWIK 340
V+K+L D +RL E + AHP+ +
Sbjct: 266 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 296
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 20/271 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ FGK LG G F L T +++A K + KR ++ + + V RE +M L P
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 74
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
V+L ++D + ++ + GEL I G + E IV + H G
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 134
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFG----LSVFYKQGEVFKDIVGSAYYIAPEVLKR 256
+IHRDLKPEN LL +E+ ++ TDFG LS KQ VG+A Y++PE+L
Sbjct: 135 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTE 190
Query: 257 KYG-PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
K +D+W++G ++Y L+ G+PPF A +E+ IF I++ DF P+A+DL
Sbjct: 191 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE----KFFPKARDL 246
Query: 316 VKKMLNSDPKQRLTATE------VLAHPWIK 340
V+K+L D +RL E + AHP+ +
Sbjct: 247 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 277
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 144/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK +G +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME AGGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRK-YGPEAD 263
DLKPEN ++ D+ ++ TDFG + K G + + G+ Y+APE++ K Y D
Sbjct: 166 DLKPENLII---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIISKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 142/280 (50%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 98
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G + E A IV HS+ +I+R
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 158
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 159 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 213
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 214 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 269
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 270 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 309
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 143/280 (51%), Gaps = 17/280 (6%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
+G +ED K G LG+G F + TG + A K I K+ + ++ V+ E
Sbjct: 6 IGEKIEDFKV----GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNE 61
Query: 130 VQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLR 187
V+I H P+I+EL +ED V+LV+E+C GE+ +R + ++E A +
Sbjct: 62 VKI-HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEM-NRYLKNRVKPFSENEARHFMH 119
Query: 188 TIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQ-GEVFKDIVGSA 246
I+ + HS G++HRDL N LL N +K DFGL+ K E + G+
Sbjct: 120 QIITGMLYLHSHGILHRDLTLSNLLL---TRNMNIKIADFGLATQLKMPHEKHYTLCGTP 176
Query: 247 YYIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPW 305
YI+PE+ R +G E+D+WS+G M Y LL G PPF ++ N ++ + S
Sbjct: 177 NYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPS--- 233
Query: 306 PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEA 345
+S +AKDL+ ++L +P RL+ + VL HP++ +
Sbjct: 234 -FLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSST 272
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 144/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L H TG +A K + K+K+V ++IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN ++ D+ ++ TDFGL+ K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLMI---DQQGYIQVTDFGLAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 143/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK +G +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME AGGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+AP +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPAIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 142/280 (50%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L H TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN ++ D+ +K TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 132/240 (55%), Gaps = 11/240 (4%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK +G +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME AGGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 142/280 (50%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L H TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G ++E A IV HS+ +I+R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 142/280 (50%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L H TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 142/280 (50%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L H TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G ++E A IV HS+ +I+R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTW-TLCGTPEYLAPEIILSKGYNKAVD 221
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 142/280 (50%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L H TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 142/280 (50%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L H TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 141/280 (50%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L H TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G + E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN ++ D+ +K TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 130/263 (49%), Gaps = 16/263 (6%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
+ LG G FG HL + G+ +A K + K +V + +E E ++M + P I+
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDE-RLMLSIVTHPFIIR 70
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
+ G ++D Q + ++M+ GGELF + + A + + HS +I+R
Sbjct: 71 MWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYR 130
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRK-YGPEAD 263
DLKPEN LL D+N +K TDFG + + +V + G+ YIAPEV+ K Y D
Sbjct: 131 DLKPENILL---DKNGHIKITDFGFAKYVP--DVTYXLCGTPDYIAPEVVSTKPYNKSID 185
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
WS G+++Y +L G PF+ + + IL + F P + KDL+ +++ D
Sbjct: 186 WWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLSRLITRD 241
Query: 324 PKQRL----TATE-VLAHPWIKE 341
QRL TE V HPW KE
Sbjct: 242 LSQRLGNLQNGTEDVKNHPWFKE 264
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 20/271 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ FGK LG G F L T +++A K + KR ++ + + V RE +M L P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
V+L ++D + ++ + GEL I G + E IV + H G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFG----LSVFYKQGEVFKDIVGSAYYIAPEVLKR 256
+IHRDLKPEN LL +E+ ++ TDFG LS KQ VG+A Y++PE+L
Sbjct: 153 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTE 208
Query: 257 KYGPE-ADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
K + +D+W++G ++Y L+ G+PPF A +E IF I++ DF P+A+DL
Sbjct: 209 KSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPE----KFFPKARDL 264
Query: 316 VKKMLNSDPKQRLTATE------VLAHPWIK 340
V+K+L D +RL E + AHP+ +
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 143/280 (51%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L HK +G +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME AGGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ +APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEALAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 142/280 (50%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L H TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 91
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G ++E A IV HS+ +I+R
Sbjct: 92 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 151
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 152 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWT-LCGTPEYLAPEIILSKGYNKAVD 206
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 207 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 262
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 263 LTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 302
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 137/271 (50%), Gaps = 20/271 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ FGK LG G F L T +++A K + KR ++ + + V RE +M L P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
V+L ++D + ++ + GEL I G + E IV + H G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFG----LSVFYKQGEVFKDIVGSAYYIAPEVLKR 256
+IHRDLKPEN LL +E+ ++ TDFG LS KQ VG+A Y++PE+L
Sbjct: 153 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARA-NXFVGTAQYVSPELLTE 208
Query: 257 KYG-PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
K +D+W++G ++Y L+ G+PPF A +E IF I++ DF P+A+DL
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPE----KFFPKARDL 264
Query: 316 VKKMLNSDPKQRLTATE------VLAHPWIK 340
V+K+L D +RL E + AHP+ +
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 138/271 (50%), Gaps = 20/271 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ FGK LG G F L T +++A K + KR ++ + + V RE +M L P
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
V+L ++D + ++ + G L I G + E IV + H G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFG----LSVFYKQGEVFKDIVGSAYYIAPEVLKR 256
+IHRDLKPEN LL +E+ ++ TDFG LS KQ VG+A Y++PE+L
Sbjct: 153 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARA-NSFVGTAQYVSPELLTE 208
Query: 257 KYGPE-ADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
K + +D+W++G ++Y L+ G+PPF A +E+ IF I++ DF P+A+DL
Sbjct: 209 KSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE----KFFPKARDL 264
Query: 316 VKKMLNSDPKQRLTATE------VLAHPWIK 340
V+K+L D +RL E + AHP+ +
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 142/280 (50%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L H TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN ++ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLMI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 141/280 (50%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L H TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G + E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 141/280 (50%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L H TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 106
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G + E A IV HS+ +I+R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 141/280 (50%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L H TG +A K + K+K+V + IE E +I+ + P + +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLTK 106
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G ++E A IV HS+ +I+R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN ++ D+ +K TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/275 (35%), Positives = 145/275 (52%), Gaps = 16/275 (5%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K +GRG FG L HK T + +A K ++K +++ + D E IM P
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 129
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+V+L A++D + +++VME GG+L + +++ E+ A +V + HSMG
Sbjct: 130 WVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMG 188
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDI-VGSAYYIAPEVLKRK- 257
IHRD+KP+N LL D++ LK DFG + K+G V D VG+ YI+PEVLK +
Sbjct: 189 FIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 245
Query: 258 ----YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAK 313
YG E D WS+GV LY +L G PF+A+S G ++ I+ T IS +AK
Sbjct: 246 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAK 305
Query: 314 DLVKKMLNSDPKQRLTAT---EVLAHPWIKEDGEA 345
+L+ L +D + RL E+ H + K D A
Sbjct: 306 NLICAFL-TDREVRLGRNGVEEIKRHLFFKNDQWA 339
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 141/280 (50%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L H TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G + E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ ++ TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 141/280 (50%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L H TG +A K + K+K+V + IE E +I+ + P + +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLTK 106
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G ++E A IV HS+ +I+R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN ++ D+ +K TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/275 (35%), Positives = 145/275 (52%), Gaps = 16/275 (5%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K +GRG FG L HK T + +A K ++K +++ + D E IM P
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 134
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+V+L A++D + +++VME GG+L + +++ E+ A +V + HSMG
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDI-VGSAYYIAPEVLKRK- 257
IHRD+KP+N LL D++ LK DFG + K+G V D VG+ YI+PEVLK +
Sbjct: 194 FIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 258 ----YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAK 313
YG E D WS+GV LY +L G PF+A+S G ++ I+ T IS +AK
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAK 310
Query: 314 DLVKKMLNSDPKQRLTAT---EVLAHPWIKEDGEA 345
+L+ L +D + RL E+ H + K D A
Sbjct: 311 NLICAFL-TDREVRLGRNGVEEIKRHLFFKNDQWA 344
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/275 (35%), Positives = 145/275 (52%), Gaps = 16/275 (5%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K +GRG FG L HK T + +A K ++K +++ + D E IM P
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 134
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+V+L A++D + +++VME GG+L + +++ E+ A +V + HSMG
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDI-VGSAYYIAPEVLKRK- 257
IHRD+KP+N LL D++ LK DFG + K+G V D VG+ YI+PEVLK +
Sbjct: 194 FIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 258 ----YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAK 313
YG E D WS+GV LY +L G PF+A+S G ++ I+ T IS +AK
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAK 310
Query: 314 DLVKKMLNSDPKQRL---TATEVLAHPWIKEDGEA 345
+L+ L +D + RL E+ H + K D A
Sbjct: 311 NLICAFL-TDREVRLGRNGVEEIKRHLFFKNDQWA 344
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 141/280 (50%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
+ LG G FG L HK TG +A K + K+K+V + IE E +I + P +V+
Sbjct: 48 RTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF-PFLVK 106
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++V+E GGE+F + G ++E A IV HS+ +I+R
Sbjct: 107 LEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ +K DFG + K G + + G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 141/280 (50%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K +G G FG L H TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G ++E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ +K DFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 140/280 (50%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG G FG L H TG +A K + K+K+V + IE E +I+ + P + +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLTK 106
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GGE+F + G + E A IV HS+ +I+R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN ++ D+ +K TDFG + K G + + G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 141/280 (50%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K +G G FG L H TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GG++F + G ++E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ +K DFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 141/280 (50%), Gaps = 25/280 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K +G G FG L H TG +A K + K+K+V + IE E +I+ + P +V+
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVK 105
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
L+ +++D ++++VME GG++F + G ++E A IV HS+ +I+R
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPE-VLKRKYGPEAD 263
DLKPEN L+ D+ +K DFG + K G + + G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
W++GV++Y + G PPF+A+ I+ I+ G + F S S KDL++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 324 PKQRL-----TATEVLAHPWI---------KEDGEAPDVP 349
+R ++ H W + EAP +P
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 141/276 (51%), Gaps = 17/276 (6%)
Query: 70 LGRPMEDVKAT-YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR 128
L +P V + + K LG+G FG L K TG+ +A K + K +V K+++
Sbjct: 141 LAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 200
Query: 129 EVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRT 188
E +++ + + P + LK +++ + VME GGELF + + ++E A
Sbjct: 201 ENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 259
Query: 189 IVQIIHTCHS-MGVIHRDLKPENFLLLNKDENSPLKATDFGL-SVFYKQGEVFKDIVGSA 246
IV + HS V++RDLK EN +L D++ +K TDFGL K G K G+
Sbjct: 260 IVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTP 316
Query: 247 YYIAPEVLK-RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPW 305
Y+APEVL+ YG D W +GV++Y ++CG PF+ + +F IL I F
Sbjct: 317 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR--- 373
Query: 306 PSISPQAKDLVKKMLNSDPKQRL-----TATEVLAH 336
++ P+AK L+ +L DPKQRL A E++ H
Sbjct: 374 -TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 408
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 141/276 (51%), Gaps = 17/276 (6%)
Query: 70 LGRPMEDVKAT-YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR 128
L +P V + + K LG+G FG L K TG+ +A K + K +V K+++
Sbjct: 138 LAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 197
Query: 129 EVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRT 188
E +++ + + P + LK +++ + VME GGELF + + ++E A
Sbjct: 198 ENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 256
Query: 189 IVQIIHTCHS-MGVIHRDLKPENFLLLNKDENSPLKATDFGL-SVFYKQGEVFKDIVGSA 246
IV + HS V++RDLK EN +L D++ +K TDFGL K G K G+
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTP 313
Query: 247 YYIAPEVLK-RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPW 305
Y+APEVL+ YG D W +GV++Y ++CG PF+ + +F IL I F
Sbjct: 314 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR--- 370
Query: 306 PSISPQAKDLVKKMLNSDPKQRL-----TATEVLAH 336
++ P+AK L+ +L DPKQRL A E++ H
Sbjct: 371 -TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 147/274 (53%), Gaps = 20/274 (7%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K +GRG FG L HK + + +A K ++K +++ + D E IM P
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 135
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+V+L A++D + +++VME GG+L + +++ E+ A +V + HSMG
Sbjct: 136 WVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSMG 194
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDI-VGSAYYIAPEVLKRK- 257
+IHRD+KP+N LL D++ LK DFG + + G V D VG+ YI+PEVLK +
Sbjct: 195 LIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQG 251
Query: 258 ----YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL--RGHIDFTSDPWPSISPQ 311
YG E D WS+GV L+ +L G PF+A+S G ++ I+ + + F D IS
Sbjct: 252 GDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPED--AEISKH 309
Query: 312 AKDLVKKMLNSDPKQRL---TATEVLAHPWIKED 342
AK+L+ L +D + RL E+ HP+ K D
Sbjct: 310 AKNLICAFL-TDREVRLGRNGVEEIKQHPFFKND 342
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 138/267 (51%), Gaps = 16/267 (5%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + K LG+G FG L K TG+ +A K + K +V K+++ E +++ + + P
Sbjct: 12 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 70
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS-M 199
+ LK +++ + VME GGELF + + ++E A IV + HS
Sbjct: 71 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 130
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSAYYIAPEVLK-RK 257
V++RDLK EN +L D++ +K TDFGL K G K G+ Y+APEVL+
Sbjct: 131 NVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND 187
Query: 258 YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVK 317
YG D W +GV++Y ++CG PF+ + +F IL I F ++ P+AK L+
Sbjct: 188 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLS 243
Query: 318 KMLNSDPKQRL-----TATEVLAHPWI 339
+L DPKQRL A E++ H +
Sbjct: 244 GLLKKDPKQRLGGGSEDAKEIMQHRFF 270
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 138/267 (51%), Gaps = 16/267 (5%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + K LG+G FG L K TG+ +A K + K +V K+++ E +++ + + P
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 68
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS-M 199
+ LK +++ + VME GGELF + + ++E A IV + HS
Sbjct: 69 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 128
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSAYYIAPEVLK-RK 257
V++RDLK EN +L D++ +K TDFGL K G K G+ Y+APEVL+
Sbjct: 129 NVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND 185
Query: 258 YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVK 317
YG D W +GV++Y ++CG PF+ + +F IL I F ++ P+AK L+
Sbjct: 186 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLS 241
Query: 318 KMLNSDPKQRL-----TATEVLAHPWI 339
+L DPKQRL A E++ H +
Sbjct: 242 GLLKKDPKQRLGGGSEDAKEIMQHRFF 268
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 138/267 (51%), Gaps = 16/267 (5%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + K LG+G FG L K TG+ +A K + K +V K+++ E +++ + + P
Sbjct: 11 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 69
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS-M 199
+ LK +++ + VME GGELF + + ++E A IV + HS
Sbjct: 70 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 129
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSAYYIAPEVLK-RK 257
V++RDLK EN +L D++ +K TDFGL K G K G+ Y+APEVL+
Sbjct: 130 NVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND 186
Query: 258 YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVK 317
YG D W +GV++Y ++CG PF+ + +F IL I F ++ P+AK L+
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLS 242
Query: 318 KMLNSDPKQRL-----TATEVLAHPWI 339
+L DPKQRL A E++ H +
Sbjct: 243 GLLKKDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 135/258 (52%), Gaps = 14/258 (5%)
Query: 81 YSFGKELGRGQFGITHLC---THKGTGQQFACKTIAKRKLVNK-EDIEDVRREVQIMHHL 136
+ K LG G +G L + TG+ +A K + K +V K + E R E Q++ H+
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 137 TGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
P +V L A++ + +HL+++ GGELF + + +TE + IV +
Sbjct: 116 RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHL 175
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFK--DIVGSAYYIAPEVL 254
H +G+I+RD+K EN LL D N + TDFGLS + E + D G+ Y+AP+++
Sbjct: 176 HKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIV 232
Query: 255 K---RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPS-ISP 310
+ + D WS+GV++Y LL G PF + E I R I + P+P +S
Sbjct: 233 RGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR-RILKSEPPYPQEMSA 291
Query: 311 QAKDLVKKMLNSDPKQRL 328
AKDL++++L DPK+RL
Sbjct: 292 LAKDLIQRLLMKDPKKRL 309
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 141/268 (52%), Gaps = 12/268 (4%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
++G G GI + T + +G+ A K + RK +E + + EV IM + N+VE+
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHE-NVVEM 213
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRD 205
+Y + +VME GG L D I+ E A++ ++Q + H+ GVIHRD
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 272
Query: 206 LKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSAYYIAPEVLKR-KYGPEAD 263
+K ++ LL + +K +DFG K+ K +VG+ Y++APE++ R YGPE D
Sbjct: 273 IKSDSILLTHDGR---VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 329
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
IWS+G+M+ ++ G PP++ E I R ++ +SP K + ++L D
Sbjct: 330 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRD 388
Query: 324 PKQRLTATEVLAHPWIKEDG-EAPDVPL 350
P QR TA E+L HP++ + G A VPL
Sbjct: 389 PAQRATAAELLKHPFLAKAGPPASIVPL 416
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 141/268 (52%), Gaps = 12/268 (4%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
++G G GI + T + +G+ A K + RK +E + + EV IM + N+VE+
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHE-NVVEM 136
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRD 205
+Y + +VME GG L D I+ E A++ ++Q + H+ GVIHRD
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 195
Query: 206 LKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSAYYIAPEVLKR-KYGPEAD 263
+K ++ LL + +K +DFG K+ K +VG+ Y++APE++ R YGPE D
Sbjct: 196 IKSDSILLTHDGR---VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 252
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
IWS+G+M+ ++ G PP++ E I R ++ +SP K + ++L D
Sbjct: 253 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRD 311
Query: 324 PKQRLTATEVLAHPWIKEDG-EAPDVPL 350
P QR TA E+L HP++ + G A VPL
Sbjct: 312 PAQRATAAELLKHPFLAKAGPPASIVPL 339
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 142/268 (52%), Gaps = 12/268 (4%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
++G G GI + T + +G+ A K + RK +E + + EV IM + N+VE+
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHE-NVVEM 82
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRD 205
+Y + +VME GG L D I+ E A++ ++Q + H+ GVIHRD
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 141
Query: 206 LKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSAYYIAPEVLKR-KYGPEAD 263
+K ++ LL + + +K +DFG K+ K +VG+ Y++APE++ R YGPE D
Sbjct: 142 IKSDSILLTH---DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 198
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
IWS+G+M+ ++ G PP++ E I R ++ +SP K + ++L D
Sbjct: 199 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRD 257
Query: 324 PKQRLTATEVLAHPWIKEDG-EAPDVPL 350
P QR TA E+L HP++ + G A VPL
Sbjct: 258 PAQRATAAELLKHPFLAKAGPPASIVPL 285
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 142/268 (52%), Gaps = 12/268 (4%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
++G G GI + T + +G+ A K + RK +E + + EV IM + N+VE+
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHE-NVVEM 93
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRD 205
+Y + +VME GG L D I+ E A++ ++Q + H+ GVIHRD
Sbjct: 94 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 152
Query: 206 LKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSAYYIAPEVLKR-KYGPEAD 263
+K ++ LL + + +K +DFG K+ K +VG+ Y++APE++ R YGPE D
Sbjct: 153 IKSDSILLTH---DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 209
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
IWS+G+M+ ++ G PP++ E I R ++ +SP K + ++L D
Sbjct: 210 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRD 268
Query: 324 PKQRLTATEVLAHPWIKEDG-EAPDVPL 350
P QR TA E+L HP++ + G A VPL
Sbjct: 269 PAQRATAAELLKHPFLAKAGPPASIVPL 296
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 142/268 (52%), Gaps = 12/268 (4%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
++G G GI + T + +G+ A K + RK +E + + EV IM + N+VE+
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHE-NVVEM 91
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRD 205
+Y + +VME GG L D I+ E A++ ++Q + H+ GVIHRD
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 150
Query: 206 LKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSAYYIAPEVLKR-KYGPEAD 263
+K ++ LL + + +K +DFG K+ K +VG+ Y++APE++ R YGPE D
Sbjct: 151 IKSDSILLTH---DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 207
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
IWS+G+M+ ++ G PP++ E I R ++ +SP K + ++L D
Sbjct: 208 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRD 266
Query: 324 PKQRLTATEVLAHPWIKEDG-EAPDVPL 350
P QR TA E+L HP++ + G A VPL
Sbjct: 267 PAQRATAAELLKHPFLAKAGPPASIVPL 294
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 134/268 (50%), Gaps = 11/268 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y G+ LG+G F + T T + FA K + K L+ E + E+ I H P
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI-HKSLDNP 102
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
++V G +ED V++V+E+C L + + TE A +R +Q + H+
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK-QGEVFKDIVGSAYYIAPEVL-KRKY 258
VIHRDLK N L LN D + +K DFGL+ + GE KD+ G+ YIAPEVL K+ +
Sbjct: 163 VIHRDLKLGN-LFLNDDMD--VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 219
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
E DIWS+G +LY LL G PPF + I + I+P A L+++
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRR 275
Query: 319 MLNSDPKQRLTATEVLAHPWIKEDGEAP 346
ML++DP R + E+L + G AP
Sbjct: 276 MLHADPTLRPSVAELLTDEFF-TSGYAP 302
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 142/268 (52%), Gaps = 12/268 (4%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
++G G GI + T + +G+ A K + RK +E + + EV IM + N+VE+
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHE-NVVEM 86
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRD 205
+Y + +VME GG L D I+ E A++ ++Q + H+ GVIHRD
Sbjct: 87 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 145
Query: 206 LKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSAYYIAPEVLKR-KYGPEAD 263
+K ++ LL + + +K +DFG K+ K +VG+ Y++APE++ R YGPE D
Sbjct: 146 IKSDSILLTH---DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 202
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSD 323
IWS+G+M+ ++ G PP++ E I R ++ +SP K + ++L D
Sbjct: 203 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRD 261
Query: 324 PKQRLTATEVLAHPWIKEDG-EAPDVPL 350
P QR TA E+L HP++ + G A VPL
Sbjct: 262 PAQRATAAELLKHPFLAKAGPPASIVPL 289
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 134/268 (50%), Gaps = 11/268 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y G+ LG+G F + T T + FA K + K L+ E + E+ I H P
Sbjct: 28 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI-HKSLDNP 86
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
++V G +ED V++V+E+C L + + TE A +R +Q + H+
Sbjct: 87 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 146
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK-QGEVFKDIVGSAYYIAPEVL-KRKY 258
VIHRDLK N L LN D + +K DFGL+ + GE KD+ G+ YIAPEVL K+ +
Sbjct: 147 VIHRDLKLGN-LFLNDDMD--VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 203
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
E DIWS+G +LY LL G PPF + I + I+P A L+++
Sbjct: 204 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRR 259
Query: 319 MLNSDPKQRLTATEVLAHPWIKEDGEAP 346
ML++DP R + E+L + G AP
Sbjct: 260 MLHADPTLRPSVAELLTDEFFTS-GYAP 286
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 128/270 (47%), Gaps = 15/270 (5%)
Query: 80 TYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQ 139
+ F + LG+G FG L K TG +A K + K ++ +D+E E +I+
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSM 199
P + +L ++ + VME GG+L I + E A I+ + H
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK 143
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSAYYIAPEVLKRK- 257
G+I+RDLK +N LL D K DFG+ G G+ YIAPE+L+
Sbjct: 144 GIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEML 200
Query: 258 YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVK 317
YGP D W++GV+LY +LCG PF AE+E +F AIL + + + W + A ++K
Sbjct: 201 YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT--W--LHEDATGILK 256
Query: 318 KMLNSDPKQRLTAT------EVLAHPWIKE 341
+ +P RL + +L HP+ KE
Sbjct: 257 SFMTKNPTMRLGSLTQGGEHAILRHPFFKE 286
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 136/265 (51%), Gaps = 19/265 (7%)
Query: 87 LGRGQFGIT---HLCTHKGTGQQFACKTIAKRKLV-NKEDIEDVRREVQIMHHLTGQPNI 142
LG+G +G T TG+ FA K + K +V N +D + E I+ + P I
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HPFI 83
Query: 143 VELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
V+L A++ ++L++E +GGELF ++ +G + E A L I + H G+I
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGII 143
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSAYYIAPEVLKRK-YGP 260
+RDLKPEN +L + +K TDFGL G V G+ Y+APE+L R +
Sbjct: 144 YRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNR 200
Query: 261 EADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKML 320
D WS+G ++Y +L G PPF E+ + IL+ ++ P ++ +A+DL+KK+L
Sbjct: 201 AVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLL 256
Query: 321 NSDPKQRL-----TATEVLAHPWIK 340
+ RL A EV AHP+ +
Sbjct: 257 KRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 136/265 (51%), Gaps = 19/265 (7%)
Query: 87 LGRGQFGIT---HLCTHKGTGQQFACKTIAKRKLV-NKEDIEDVRREVQIMHHLTGQPNI 142
LG+G +G T TG+ FA K + K +V N +D + E I+ + P I
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HPFI 83
Query: 143 VELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
V+L A++ ++L++E +GGELF ++ +G + E A L I + H G+I
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGII 143
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSAYYIAPEVLKRK-YGP 260
+RDLKPEN +L + +K TDFGL G V G+ Y+APE+L R +
Sbjct: 144 YRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNR 200
Query: 261 EADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKML 320
D WS+G ++Y +L G PPF E+ + IL+ ++ P ++ +A+DL+KK+L
Sbjct: 201 AVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLL 256
Query: 321 NSDPKQRL-----TATEVLAHPWIK 340
+ RL A EV AHP+ +
Sbjct: 257 KRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 133/268 (49%), Gaps = 11/268 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y G+ LG+G F + T T + FA K + K L+ E + E+ I H P
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI-HKSLDNP 102
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
++V G +ED V++V+E+C L + + TE A +R +Q + H+
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK-QGEVFKDIVGSAYYIAPEVL-KRKY 258
VIHRDLK N L LN D + +K DFGL+ + GE K + G+ YIAPEVL K+ +
Sbjct: 163 VIHRDLKLGN-LFLNDDMD--VKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGH 219
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
E DIWS+G +LY LL G PPF + I + I+P A L+++
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRR 275
Query: 319 MLNSDPKQRLTATEVLAHPWIKEDGEAP 346
ML++DP R + E+L + G AP
Sbjct: 276 MLHADPTLRPSVAELLTDEFF-TSGYAP 302
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 133/268 (49%), Gaps = 11/268 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y G+ LG+G F + T T + FA K + K L+ E + E+ I H P
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI-HKSLDNP 102
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
++V G +ED V++V+E+C L + + TE A +R +Q + H+
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK-QGEVFKDIVGSAYYIAPEVL-KRKY 258
VIHRDLK N L LN D + +K DFGL+ + GE K + G+ YIAPEVL K+ +
Sbjct: 163 VIHRDLKLGN-LFLNDDMD--VKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGH 219
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
E DIWS+G +LY LL G PPF + I + I+P A L+++
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRR 275
Query: 319 MLNSDPKQRLTATEVLAHPWIKEDGEAP 346
ML++DP R + E+L + G AP
Sbjct: 276 MLHADPTLRPSVAELLTDEFF-TSGYAP 302
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 142/266 (53%), Gaps = 23/266 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
++G G GI L K +G+Q A K + RK +E + + EV IM N+VE+
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFN---EVVIMRDYQ-HFNVVEM 107
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRD 205
+Y + + ++ME GG L D I+++ E A++ ++Q + H+ GVIHRD
Sbjct: 108 YKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRD 166
Query: 206 LKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSAYYIAPEVLKRK-YGPEAD 263
+K ++ LL + +K +DFG K K +VG+ Y++APEV+ R Y E D
Sbjct: 167 IKSDSILL---TLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVD 223
Query: 264 IWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPS------ISPQAKDLVK 317
IWS+G+M+ ++ G PP++++S A+ R P P +SP +D ++
Sbjct: 224 IWSLGIMVIEMVDGEPPYFSDSP---VQAMKR----LRDSPPPKLKNSHKVSPVLRDFLE 276
Query: 318 KMLNSDPKQRLTATEVLAHPWIKEDG 343
+ML DP++R TA E+L HP++ + G
Sbjct: 277 RMLVRDPQERATAQELLDHPFLLQTG 302
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 76/93 (81%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
LSEEEI GLKE+FK IDTDNSGTIT +ELK GL + G++L E E K LM+AAD D +GTI
Sbjct: 4 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTI 63
Query: 439 DYHEFITATMHLNRMDREEHLYTAFQHFDKDNS 471
DY EFI AT+HLN+++REE+L +AF +FDKD S
Sbjct: 64 DYGEFIAATVHLNKLEREENLVSAFSYFDKDGS 96
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 391 FKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTIDYHEF 443
F D D SG ITL+E++Q G L + +++ D D +G IDY EF
Sbjct: 88 FSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDNDGQIDYGEF 138
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 130/258 (50%), Gaps = 10/258 (3%)
Query: 74 MEDVKAT-YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQI 132
++ VK T ++F LG+G FG L KGT + +A K + K ++ +D+E E ++
Sbjct: 13 LDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRV 72
Query: 133 MHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI 192
+ L P + +L ++ ++ VME GG+L I G + E A I
Sbjct: 73 LALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIG 132
Query: 193 IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQ-GEVFKDIVGSAYYIAP 251
+ H G+I+RDLK +N +L D +K DFG+ + G ++ G+ YIAP
Sbjct: 133 LFFLHKRGIIYRDLKLDNVML---DSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAP 189
Query: 252 EVLK-RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISP 310
E++ + YG D W+ GV+LY +L G PPF E E +F +I+ ++ + S+S
Sbjct: 190 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSK 245
Query: 311 QAKDLVKKMLNSDPKQRL 328
+A + K ++ P +RL
Sbjct: 246 EAVSICKGLMTKHPAKRL 263
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 142/273 (52%), Gaps = 37/273 (13%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM---HHLTGQPNI 142
++G G GI + T K TG+Q A K + RK +E + + EV IM HH N+
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFN---EVVIMRDYHH----DNV 104
Query: 143 VELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
V++ +Y + +VME GG L D I+ E A++ ++++ + H+ GVI
Sbjct: 105 VDMYSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVI 163
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSAYYIAPEVLKR-KYGP 260
HRD+K ++ LL + + +K +DFG K+ K +VG+ Y++APEV+ R YG
Sbjct: 164 HRDIKSDSILLTS---DGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGT 220
Query: 261 EADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK-- 318
E DIWS+G+M+ ++ G PP++ E A+ R D S+ P+ KDL K
Sbjct: 221 EVDIWSLGIMVIEMIDGEPPYFNEPP---LQAMRR-----IRD---SLPPRVKDLHKVSS 269
Query: 319 --------MLNSDPKQRLTATEVLAHPWIKEDG 343
ML +P QR TA E+L HP++K G
Sbjct: 270 VLRGFLDLMLVREPSQRATAQELLGHPFLKLAG 302
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 120/250 (48%), Gaps = 10/250 (4%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LG+G F + T + FA K + K L+ E + E+ I L Q ++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFH 87
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRDL 206
G +ED V +V+ELC L + + TE A LR IV H VIHRDL
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 207 KPENFLLLNKDENSPLKATDFGLSVFYK-QGEVFKDIVGSAYYIAPEVLKRK-YGPEADI 264
K N L +E+ +K DFGL+ + GE K + G+ YIAPEVL +K + E D+
Sbjct: 148 KLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 204
Query: 265 WSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSDP 324
WSIG ++Y LL G PPF + I + I+P A L++KML +DP
Sbjct: 205 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQTDP 260
Query: 325 KQRLTATEVL 334
R T E+L
Sbjct: 261 TARPTINELL 270
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 120/250 (48%), Gaps = 10/250 (4%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LG+G F + T + FA K + K L+ E + E+ I L Q ++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFH 83
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRDL 206
G +ED V +V+ELC L + + TE A LR IV H VIHRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 207 KPENFLLLNKDENSPLKATDFGLSVFYK-QGEVFKDIVGSAYYIAPEVLKRK-YGPEADI 264
K N L +E+ +K DFGL+ + GE K + G+ YIAPEVL +K + E D+
Sbjct: 144 KLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 265 WSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSDP 324
WSIG ++Y LL G PPF + I + I+P A L++KML +DP
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 256
Query: 325 KQRLTATEVL 334
R T E+L
Sbjct: 257 TARPTINELL 266
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 120/250 (48%), Gaps = 10/250 (4%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LG+G F + T + FA K + K L+ E + E+ I L Q ++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFH 83
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRDL 206
G +ED V +V+ELC L + + TE A LR IV H VIHRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 207 KPENFLLLNKDENSPLKATDFGLSVFYK-QGEVFKDIVGSAYYIAPEVLKRK-YGPEADI 264
K N L +E+ +K DFGL+ + GE K + G+ YIAPEVL +K + E D+
Sbjct: 144 KLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 265 WSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSDP 324
WSIG ++Y LL G PPF + I + I+P A L++KML +DP
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 256
Query: 325 KQRLTATEVL 334
R T E+L
Sbjct: 257 TARPTINELL 266
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 120/250 (48%), Gaps = 10/250 (4%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LG+G F + T + FA K + K L+ E + E+ I L Q ++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFH 105
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRDL 206
G +ED V +V+ELC L + + TE A LR IV H VIHRDL
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 207 KPENFLLLNKDENSPLKATDFGLSVFYK-QGEVFKDIVGSAYYIAPEVLKRK-YGPEADI 264
K N L +E+ +K DFGL+ + GE K + G+ YIAPEVL +K + E D+
Sbjct: 166 KLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 222
Query: 265 WSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSDP 324
WSIG ++Y LL G PPF + I + I+P A L++KML +DP
Sbjct: 223 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 278
Query: 325 KQRLTATEVL 334
R T E+L
Sbjct: 279 TARPTINELL 288
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 120/250 (48%), Gaps = 10/250 (4%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LG+G F + T + FA K + K L+ E + E+ I L Q ++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFH 107
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRDL 206
G +ED V +V+ELC L + + TE A LR IV H VIHRDL
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 207 KPENFLLLNKDENSPLKATDFGLSVFYK-QGEVFKDIVGSAYYIAPEVLKRK-YGPEADI 264
K N L +E+ +K DFGL+ + GE K + G+ YIAPEVL +K + E D+
Sbjct: 168 KLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 224
Query: 265 WSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSDP 324
WSIG ++Y LL G PPF + I + I+P A L++KML +DP
Sbjct: 225 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 280
Query: 325 KQRLTATEVL 334
R T E+L
Sbjct: 281 TARPTINELL 290
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 120/250 (48%), Gaps = 10/250 (4%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LG+G F + T + FA K + K L+ E + E+ I L Q ++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-HVVGFH 81
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRDL 206
G +ED V +V+ELC L + + TE A LR IV H VIHRDL
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 207 KPENFLLLNKDENSPLKATDFGLSVFYK-QGEVFKDIVGSAYYIAPEVLKRK-YGPEADI 264
K N L +E+ +K DFGL+ + GE K + G+ YIAPEVL +K + E D+
Sbjct: 142 KLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 198
Query: 265 WSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSDP 324
WSIG ++Y LL G PPF + I + I+P A L++KML +DP
Sbjct: 199 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 254
Query: 325 KQRLTATEVL 334
R T E+L
Sbjct: 255 TARPTINELL 264
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 133/265 (50%), Gaps = 12/265 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ K LG+G FG L K T Q FA K + K ++ +D+E E +++ P
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+ + ++ K+++ VME GG+L I + + A I+ + HS G
Sbjct: 80 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 139
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEV-FKDIVGSAYYIAPEV-LKRKY 258
+++RDLK +N LL D++ +K DFG+ G+ + G+ YIAPE+ L +KY
Sbjct: 140 IVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKY 196
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDP-WPSISPQAKDLVK 317
D WS GV+LY +L G PF + E +F++I +D P W + +AKDL+
Sbjct: 197 NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI---RMDNPFYPRW--LEKEAKDLLV 251
Query: 318 KMLNSDPKQRLTAT-EVLAHPWIKE 341
K+ +P++RL ++ HP +E
Sbjct: 252 KLFVREPEKRLGVRGDIRQHPLFRE 276
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G +G L ++ T + A K + ++ V+ E++++E+ I L +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEIXINKMLNHE- 64
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
N+V+ G + +L +E C+GGELFDRI E A ++ + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAYYIAPEVLKRK 257
+ HRD+KPEN LL DE LK +DFGL+ ++ + + + G+ Y+APE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 258 --YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
+ D+WS G++L +L G P+ S+ + + + +PW I L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLAL 240
Query: 316 VKKMLNSDPKQRLTATEVLAHPW 338
+ K+L +P R+T ++ W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G +G L ++ T + A K + ++ V+ E++++E+ I L +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEIXINKMLNHE- 65
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
N+V+ G + +L +E C+GGELFDRI E A ++ + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAYYIAPEVLKRK 257
+ HRD+KPEN LL DE LK +DFGL+ ++ + + + G+ Y+APE+LKR+
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 258 --YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
+ D+WS G++L +L G P+ S+ + + + +PW I L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLAL 241
Query: 316 VKKMLNSDPKQRLTATEVLAHPW 338
+ K+L +P R+T ++ W
Sbjct: 242 LHKILVENPSARITIPDIKKDRW 264
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G +G L ++ T + A K + ++ V+ E++++E+ I L +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEIXINKMLNHE- 64
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
N+V+ G + +L +E C+GGELFDRI E A ++ + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAYYIAPEVLKRK 257
+ HRD+KPEN LL DE LK +DFGL+ ++ + + + G+ Y+APE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 258 --YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
+ D+WS G++L +L G P+ S+ + + + +PW I L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLAL 240
Query: 316 VKKMLNSDPKQRLTATEVLAHPW 338
+ K+L +P R+T ++ W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 128/256 (50%), Gaps = 9/256 (3%)
Query: 79 ATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
+ + F K +G+G FG L HK +A K + K+ ++ K++ + + E ++
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
P +V L +++ ++ V++ GGELF + + + E A I + HS
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHS 157
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGL-SVFYKQGEVFKDIVGSAYYIAPEVL-KR 256
+ +++RDLKPEN LL D + TDFGL + G+ Y+APEVL K+
Sbjct: 158 LNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQ 214
Query: 257 KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLV 316
Y D W +G +LY +L G+PPF++ + +++ IL + P+I+ A+ L+
Sbjct: 215 PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHLL 270
Query: 317 KKMLNSDPKQRLTATE 332
+ +L D +RL A +
Sbjct: 271 EGLLQKDRTKRLGAKD 286
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G +G L ++ T + A K + ++ V+ E++++E+ I L +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLNHE- 65
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
N+V+ G + +L +E C+GGELFDRI E A ++ + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAYYIAPEVLKRK 257
+ HRD+KPEN LL DE LK +DFGL+ ++ + + + G+ Y+APE+LKR+
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 258 --YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
+ D+WS G++L +L G P+ S+ + + + +PW I L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLAL 241
Query: 316 VKKMLNSDPKQRLTATEVLAHPW 338
+ K+L +P R+T ++ W
Sbjct: 242 LHKILVENPSARITIPDIKKDRW 264
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G +G L ++ T + A K + ++ V+ E++++E+ I L +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLNHE- 65
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
N+V+ G + +L +E C+GGELFDRI E A ++ + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAYYIAPEVLKRK 257
+ HRD+KPEN LL DE LK +DFGL+ ++ + + + G+ Y+APE+LKR+
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 258 --YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
+ D+WS G++L +L G P+ S+ + + + +PW I L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLAL 241
Query: 316 VKKMLNSDPKQRLTATEVLAHPW 338
+ K+L +P R+T ++ W
Sbjct: 242 LHKILVENPSARITIPDIKKDRW 264
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G +G L ++ T + A K + ++ V+ E++++E+ I L +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLNHE- 65
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
N+V+ G + +L +E C+GGELFDRI E A ++ + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAYYIAPEVLKRK 257
+ HRD+KPEN LL DE LK +DFGL+ ++ + + + G+ Y+APE+LKR+
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 258 --YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
+ D+WS G++L +L G P+ S+ + + + +PW I L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLAL 241
Query: 316 VKKMLNSDPKQRLTATEVLAHPW 338
+ K+L +P R+T ++ W
Sbjct: 242 LHKILVENPSARITIPDIKKDRW 264
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 137/273 (50%), Gaps = 12/273 (4%)
Query: 77 VKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHL 136
K T+ + LG+G FG C + TG+ +ACK + K+++ ++ E QI+ +
Sbjct: 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 137 TGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLRTIVQIIH 194
+ +V L AYE K ++ LV+ L GG+L I G + E A I +
Sbjct: 242 NSR-FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLE 300
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVL 254
H +++RDLKPEN LL D++ ++ +D GL+V +G+ K VG+ Y+APEV+
Sbjct: 301 DLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 255 K-RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAK 313
K +Y D W++G +LY ++ G PF + + R + + SPQA+
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQAR 417
Query: 314 DLVKKMLNSDPKQRL-----TATEVLAHPWIKE 341
L ++L DP +RL +A EV HP K+
Sbjct: 418 SLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G +G L ++ T + A K + ++ V+ E++++E+ I L +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLNHE- 64
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
N+V+ G + +L +E C+GGELFDRI E A ++ + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAYYIAPEVLKRK 257
+ HRD+KPEN LL DE LK +DFGL+ ++ + + + G+ Y+APE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 258 --YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
+ D+WS G++L +L G P+ S+ + + + +PW I L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYL-NPWKKIDSAPLAL 240
Query: 316 VKKMLNSDPKQRLTATEVLAHPW 338
+ K+L +P R+T ++ W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G +G L ++ T + A K + ++ V+ E++++E+ I L +
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLNHE- 63
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
N+V+ G + +L +E C+GGELFDRI E A ++ + H +G
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 123
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAYYIAPEVLKRK 257
+ HRD+KPEN LL DE LK +DFGL+ ++ + + + G+ Y+APE+LKR+
Sbjct: 124 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 258 --YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
+ D+WS G++L +L G P+ S+ + + + +PW I L
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLAL 239
Query: 316 VKKMLNSDPKQRLTATEVLAHPW 338
+ K+L +P R+T ++ W
Sbjct: 240 LHKILVENPSARITIPDIKKDRW 262
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 138/289 (47%), Gaps = 37/289 (12%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKED------------------ 122
Y+ E+G+G +G+ L ++ +A K ++K+KL+ +
Sbjct: 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCI 74
Query: 123 -----IEDVRREVQIMHHLTGQPNIVELKGAYEDKQSVHLVM--ELCAGGELFDRIIAKG 175
IE V +E+ I+ L PN+V+L +D HL M EL G + + K
Sbjct: 75 QPRGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP 133
Query: 176 HYTERAAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQ 235
+E A + +++ I H +IHRD+KP N L+ E+ +K DFG+S +K
Sbjct: 134 -LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV---GEDGHIKIADFGVSNEFKG 189
Query: 236 GE-VFKDIVGSAYYIAPEVLK--RKY--GPEADIWSIGVMLYILLCGVPPFWAESEHGIF 290
+ + + VG+ ++APE L RK G D+W++GV LY + G PF E +
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLH 249
Query: 291 NAILRGHIDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWI 339
+ I ++F P I+ KDL+ +ML+ +P+ R+ E+ HPW+
Sbjct: 250 SKIKSQALEFPDQP--DIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G +G L ++ T + A K + ++ V+ E++++E+ I L +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLNHE- 64
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
N+V+ G + +L +E C+GGELFDRI E A ++ + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAYYIAPEVLKRK 257
+ HRD+KPEN LL DE LK +DFGL+ ++ + + + G+ Y+APE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 258 --YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
+ D+WS G++L +L G P+ S+ + + + +PW I L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLAL 240
Query: 316 VKKMLNSDPKQRLTATEVLAHPW 338
+ K+L +P R+T ++ W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 136/267 (50%), Gaps = 11/267 (4%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHH 135
D K Y+ +++G+G G + TGQ+ A + + ++ KE I + E+ +M
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN---EILVMRE 73
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
PNIV +Y + +VME AGG L D ++ + E A++ R +Q +
Sbjct: 74 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSAYYIAPEVL 254
HS VIHRD+K +N LL + +K TDFG + ++VG+ Y++APEV+
Sbjct: 132 LHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVV 188
Query: 255 KRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAK 313
RK YGP+ DIWS+G+M ++ G PP+ E+ I +P +S +
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFR 247
Query: 314 DLVKKMLNSDPKQRLTATEVLAHPWIK 340
D + + L+ D ++R +A E+L H ++K
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G +G L ++ T + A K + ++ V+ E++++E+ I L +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLNHE- 65
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
N+V+ G + +L +E C+GGELFDRI E A ++ + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAYYIAPEVLKRK 257
+ HRD+KPEN LL DE LK +DFGL+ ++ + + + G+ Y+APE+LKR+
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 258 --YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
+ D+WS G++L +L G P+ S+ + + + +PW I L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLAL 241
Query: 316 VKKMLNSDPKQRLTATEVLAHPW 338
+ K+L +P R+T ++ W
Sbjct: 242 LHKILVENPSARITIPDIKKDRW 264
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G +G L ++ T + A K + ++ V+ E++++E+ I L +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLNHE- 64
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
N+V+ G + +L +E C+GGELFDRI E A ++ + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAYYIAPEVLKRK 257
+ HRD+KPEN LL DE LK +DFGL+ ++ + + + G+ Y+APE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 258 --YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
+ D+WS G++L +L G P+ S+ + + + +PW I L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLAL 240
Query: 316 VKKMLNSDPKQRLTATEVLAHPW 338
+ K+L +P R+T ++ W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 137/273 (50%), Gaps = 12/273 (4%)
Query: 77 VKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHL 136
K T+ + LG+G FG C + TG+ +ACK + K+++ ++ E QI+ +
Sbjct: 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 137 TGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLRTIVQIIH 194
+ +V L AYE K ++ LV+ L GG+L I G + E A I +
Sbjct: 242 NSR-FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLE 300
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVL 254
H +++RDLKPEN LL D++ ++ +D GL+V +G+ K VG+ Y+APEV+
Sbjct: 301 DLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 255 K-RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAK 313
K +Y D W++G +LY ++ G PF + + R + + SPQA+
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQAR 417
Query: 314 DLVKKMLNSDPKQRL-----TATEVLAHPWIKE 341
L ++L DP +RL +A EV HP K+
Sbjct: 418 SLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G +G L ++ T + A K + ++ V+ E++++E+ I L +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLNHE- 64
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
N+V+ G + +L +E C+GGELFDRI E A ++ + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAYYIAPEVLKRK 257
+ HRD+KPEN LL DE LK +DFGL+ ++ + + + G+ Y+APE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 258 --YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
+ D+WS G++L +L G P+ S+ + + + +PW I L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLAL 240
Query: 316 VKKMLNSDPKQRLTATEVLAHPW 338
+ K+L +P R+T ++ W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G +G L ++ T + A K + ++ V+ E++++E+ I L +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLNHE- 64
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
N+V+ G + +L +E C+GGELFDRI E A ++ + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAYYIAPEVLKRK 257
+ HRD+KPEN LL DE LK +DFGL+ ++ + + + G+ Y+APE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 258 --YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
+ D+WS G++L +L G P+ S+ + + + +PW I L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLAL 240
Query: 316 VKKMLNSDPKQRLTATEVLAHPW 338
+ K+L +P R+T ++ W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G +G L ++ T + A K + ++ V+ E++++E+ I L +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLNHE- 65
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
N+V+ G + +L +E C+GGELFDRI E A ++ + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAYYIAPEVLKRK 257
+ HRD+KPEN LL DE LK +DFGL+ ++ + + + G+ Y+APE+LKR+
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 258 --YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
+ D+WS G++L +L G P+ S+ + + + +PW I L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLAL 241
Query: 316 VKKMLNSDPKQRLTATEVLAHPW 338
+ K+L +P R+T ++ W
Sbjct: 242 LHKILVENPSARITIPDIKKDRW 264
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G +G L ++ T + A K + ++ V+ E++++E+ I L +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLNHE- 64
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
N+V+ G + +L +E C+GGELFDRI E A ++ + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAYYIAPEVLKRK 257
+ HRD+KPEN LL DE LK +DFGL+ ++ + + + G+ Y+APE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 258 --YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
+ D+WS G++L +L G P+ S+ + + + +PW I L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLAL 240
Query: 316 VKKMLNSDPKQRLTATEVLAHPW 338
+ K+L +P R+T ++ W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G +G L ++ T + A K + ++ V+ E++++E+ I L +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLNHE- 64
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
N+V+ G + +L +E C+GGELFDRI E A ++ + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAYYIAPEVLKRK 257
+ HRD+KPEN LL DE LK +DFGL+ ++ + + + G+ Y+APE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 258 --YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
+ D+WS G++L +L G P+ S+ + + + +PW I L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLAL 240
Query: 316 VKKMLNSDPKQRLTATEVLAHPW 338
+ K+L +P R+T ++ W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G +G L ++ T + A K + ++ V+ E++++E+ I L +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLNHE- 64
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
N+V+ G + +L +E C+GGELFDRI E A ++ + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAYYIAPEVLKRK 257
+ HRD+KPEN LL DE LK +DFGL+ ++ + + + G+ Y+APE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 258 --YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
+ D+WS G++L +L G P+ S+ + + + +PW I L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLAL 240
Query: 316 VKKMLNSDPKQRLTATEVLAHPW 338
+ K+L +P R+T ++ W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G +G L ++ T + A K + ++ V+ E++++E+ I L +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLNHE- 64
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
N+V+ G + +L +E C+GGELFDRI E A ++ + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAYYIAPEVLKRK 257
+ HRD+KPEN LL DE LK +DFGL+ ++ + + + G+ Y+APE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 258 --YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
+ D+WS G++L +L G P+ S+ + + + +PW I L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLAL 240
Query: 316 VKKMLNSDPKQRLTATEVLAHPW 338
+ K+L +P R+T ++ W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G +G L ++ T + A K + ++ V+ E++++E+ I L +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLNHE- 65
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
N+V+ G + +L +E C+GGELFDRI E A ++ + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAYYIAPEVLKRK 257
+ HRD+KPEN LL DE LK +DFGL+ ++ + + + G+ Y+APE+LKR+
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 258 --YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
+ D+WS G++L +L G P+ S+ + + + +PW I L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLAL 241
Query: 316 VKKMLNSDPKQRLTATEVLAHPW 338
+ K+L +P R+T ++ W
Sbjct: 242 LHKILVENPSARITIPDIKKDRW 264
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 132/261 (50%), Gaps = 12/261 (4%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K LG+G FG L K T Q FA K + K ++ +D+E E +++ P +
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
+ ++ K+++ VME GG+L I + + A I+ + HS G+++R
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYR 142
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKD-IVGSAYYIAPEV-LKRKYGPEA 262
DLK +N LL D++ +K DFG+ G+ + G+ YIAPE+ L +KY
Sbjct: 143 DLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSV 199
Query: 263 DIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDP-WPSISPQAKDLVKKMLN 321
D WS GV+LY +L G PF + E +F++I +D P W + +AKDL+ K+
Sbjct: 200 DWWSFGVLLYEMLIGQSPFHGQDEEELFHSI---RMDNPFYPRW--LEKEAKDLLVKLFV 254
Query: 322 SDPKQRLTAT-EVLAHPWIKE 341
+P++RL ++ HP +E
Sbjct: 255 REPEKRLGVRGDIRQHPLFRE 275
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 136/289 (47%), Gaps = 26/289 (8%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQ-QFACKTIAKRKLVNKEDIED---VRREV 130
E +A Y G LG+G FG T H+ T + Q A K I + +++ + D EV
Sbjct: 27 EAFEAEYRLGPLLGKGGFG-TVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEV 85
Query: 131 QIMHHLT---GQPNIVELKGAYEDKQSVHLVMEL-CAGGELFDRIIAKGHYTERAAASLL 186
++ + G P ++ L +E ++ LV+E +LFD I KG E +
Sbjct: 86 ALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFF 145
Query: 187 RTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSA 246
+V I CHS GV+HRD+K EN L+ + + K DFG E + D G+
Sbjct: 146 GQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCA--KLIDFGSGALLHD-EPYTDFDGTR 202
Query: 247 YYIAPEVLKRK--YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDP 304
Y PE + R + A +WS+G++LY ++CG PF + E IL + F +
Sbjct: 203 VYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHFPA-- 254
Query: 305 WPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNA 353
+SP L+++ L P R + E+L PW++ E DVPL+ +
Sbjct: 255 --HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE--DVPLNPS 299
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G +G L ++ T + A K + ++ V+ E++++E+ I L +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINAMLNHE- 65
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
N+V+ G + +L +E C+GGELFDRI E A ++ + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAYYIAPEVLKRK 257
+ HRD+KPEN LL DE LK +DFGL+ ++ + + + G+ Y+APE+LKR+
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 258 --YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
+ D+WS G++L +L G P+ S+ + + + +PW I L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLAL 241
Query: 316 VKKMLNSDPKQRLTATEVLAHPW 338
+ K+L +P R+T ++ W
Sbjct: 242 LHKILVENPSARITIPDIKKDRW 264
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 135/267 (50%), Gaps = 11/267 (4%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHH 135
D K Y+ +++G+G G + TGQ+ A + + ++ KE I + E+ +M
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN---EILVMRE 73
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
PNIV +Y + +VME AGG L D ++ + E A++ R +Q +
Sbjct: 74 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSAYYIAPEVL 254
HS VIHRD+K +N LL + +K TDFG + +VG+ Y++APEV+
Sbjct: 132 LHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 188
Query: 255 KRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAK 313
RK YGP+ DIWS+G+M ++ G PP+ E+ I +P +S +
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFR 247
Query: 314 DLVKKMLNSDPKQRLTATEVLAHPWIK 340
D + + L+ D ++R +A E+L H ++K
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 144/297 (48%), Gaps = 43/297 (14%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR----REVQIMHHLTGQPN 141
++G G +G+ C ++ TGQ +A +K + ED ++ RE++++ L PN
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQ-----IVAIKKFLESEDDPVIKKIALREIRMLKQLK-HPN 63
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGV 201
+V L + K+ +HLV E C L + + E S+ +Q ++ CH
Sbjct: 64 LVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC 123
Query: 202 IHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVL--KRKY 258
IHRD+KPEN L+ ++S +K DFG + + + + D V + +Y +PE+L +Y
Sbjct: 124 IHRDVKPENILI---TKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQY 180
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESE--------HGIFNAILRGHIDFTS-------- 302
GP D+W+IG + LL GVP + +S+ + + I R F++
Sbjct: 181 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK 240
Query: 303 --DP---------WPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDV 348
DP +P+IS A L+K L+ DP +RLT ++L HP+ + E D+
Sbjct: 241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIEDL 297
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 134/267 (50%), Gaps = 11/267 (4%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHH 135
D K Y+ +++G+G G + TGQ+ A + + ++ KE I + E+ +M
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN---EILVMRE 73
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
PNIV +Y + +VME AGG L D ++ + E A++ R +Q +
Sbjct: 74 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSAYYIAPEVL 254
HS VIHRD+K +N LL + +K TDFG + +VG+ Y++APEV+
Sbjct: 132 LHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV 188
Query: 255 KRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAK 313
RK YGP+ DIWS+G+M ++ G PP+ E+ I +P +S +
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFR 247
Query: 314 DLVKKMLNSDPKQRLTATEVLAHPWIK 340
D + + L D ++R +A E+L H ++K
Sbjct: 248 DFLNRCLEMDVEKRGSAKELLQHQFLK 274
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 137/279 (49%), Gaps = 22/279 (7%)
Query: 71 GRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR-- 128
G+ E +++ Y G LG G FG + A K + K ++ + ++ + R
Sbjct: 43 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 129 -EVQIMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASL 185
EV ++ ++ G ++ L +E S L++E +LFD I +G E A S
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVG 244
+++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 218
Query: 245 SAYYIAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTS 302
+ Y PE ++ R +G A +WS+G++LY ++CG PF + E I+RG + F
Sbjct: 219 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ 272
Query: 303 DPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 273 ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 137/279 (49%), Gaps = 22/279 (7%)
Query: 71 GRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR-- 128
G+ E +++ Y G LG G FG + A K + K ++ + ++ + R
Sbjct: 35 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 94
Query: 129 -EVQIMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASL 185
EV ++ ++ G ++ L +E S L++E +LFD I +G E A S
Sbjct: 95 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 154
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVG 244
+++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 210
Query: 245 SAYYIAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTS 302
+ Y PE ++ R +G A +WS+G++LY ++CG PF + E I+RG + F
Sbjct: 211 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ 264
Query: 303 DPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 265 ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 299
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 137/279 (49%), Gaps = 22/279 (7%)
Query: 71 GRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR-- 128
G+ E +++ Y G LG G FG + A K + K ++ + ++ + R
Sbjct: 15 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 129 -EVQIMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASL 185
EV ++ ++ G ++ L +E S L++E +LFD I +G E A S
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVG 244
+++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 190
Query: 245 SAYYIAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTS 302
+ Y PE ++ R +G A +WS+G++LY ++CG PF + E I+RG + F
Sbjct: 191 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ 244
Query: 303 DPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 245 ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 130/263 (49%), Gaps = 12/263 (4%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G G L ++ T + A K + ++ V+ E++++E+ I L +
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLNHE- 64
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
N+V+ G + +L +E C+GGELFDRI E A ++ + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAYYIAPEVLKRK 257
+ HRD+KPEN LL DE LK +DFGL+ ++ + + + G+ Y+APE+LKR+
Sbjct: 125 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 258 --YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
+ D+WS G++L +L G P+ S+ + + + +PW I L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLAL 240
Query: 316 VKKMLNSDPKQRLTATEVLAHPW 338
+ K+L +P R+T ++ W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 137/279 (49%), Gaps = 22/279 (7%)
Query: 71 GRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR-- 128
G+ E +++ Y G LG G FG + A K + K ++ + ++ + R
Sbjct: 16 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 129 -EVQIMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASL 185
EV ++ ++ G ++ L +E S L++E +LFD I +G E A S
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVG 244
+++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 191
Query: 245 SAYYIAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTS 302
+ Y PE ++ R +G A +WS+G++LY ++CG PF + E I+RG + F
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ 245
Query: 303 DPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 246 ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 137/279 (49%), Gaps = 22/279 (7%)
Query: 71 GRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR-- 128
G+ E +++ Y G LG G FG + A K + K ++ + ++ + R
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 129 -EVQIMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASL 185
EV ++ ++ G ++ L +E S L++E +LFD I +G E A S
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVG 244
+++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 203
Query: 245 SAYYIAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTS 302
+ Y PE ++ R +G A +WS+G++LY ++CG PF + E I+RG + F
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ 257
Query: 303 DPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 258 ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 137/279 (49%), Gaps = 22/279 (7%)
Query: 71 GRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR-- 128
G+ E +++ Y G LG G FG + A K + K ++ + ++ + R
Sbjct: 15 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 129 -EVQIMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASL 185
EV ++ ++ G ++ L +E S L++E +LFD I +G E A S
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVG 244
+++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 190
Query: 245 SAYYIAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTS 302
+ Y PE ++ R +G A +WS+G++LY ++CG PF + E I+RG + F
Sbjct: 191 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ 244
Query: 303 DPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 245 ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 124/252 (49%), Gaps = 13/252 (5%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
++F LG+G FG L KGT + +A K + K ++ +D+E E +++ P
Sbjct: 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 81
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+ +L ++ ++ VME GG+L I G + E A I + S G
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 141
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGL---SVFYKQGEVFKDIVGSAYYIAPEVLK-R 256
+I+RDLK +N +L D +K DFG+ +++ G K G+ YIAPE++ +
Sbjct: 142 IIYRDLKLDNVML---DSEGHIKIADFGMCKENIW--DGVTTKXFCGTPDYIAPEIIAYQ 196
Query: 257 KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLV 316
YG D W+ GV+LY +L G PF E E +F +I+ ++ + S+S +A +
Sbjct: 197 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAIC 252
Query: 317 KKMLNSDPKQRL 328
K ++ P +RL
Sbjct: 253 KGLMTKHPGKRL 264
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 137/279 (49%), Gaps = 22/279 (7%)
Query: 71 GRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR-- 128
G+ E +++ Y G LG G FG + A K + K ++ + ++ + R
Sbjct: 16 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 129 -EVQIMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASL 185
EV ++ ++ G ++ L +E S L++E +LFD I +G E A S
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVG 244
+++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 191
Query: 245 SAYYIAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTS 302
+ Y PE ++ R +G A +WS+G++LY ++CG PF + E I+RG + F
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ 245
Query: 303 DPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 246 ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 130/261 (49%), Gaps = 22/261 (8%)
Query: 79 ATYSFGKELGRGQFGITHLC---THKGTGQQFACKTIAKRKLVNKEDIE-DVRREVQIMH 134
+ + K LG+G FG L + Q +A K + K L ++ + + R++ +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE- 82
Query: 135 HLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
P IV+L A++ + ++L+++ GG+LF R+ + +TE L + +
Sbjct: 83 --VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD 140
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV----FYKQGEVFKDIVGSAYYIA 250
HS+G+I+RDLKPEN LL DE +K TDFGLS K+ F G+ Y+A
Sbjct: 141 HLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSF---CGTVEYMA 194
Query: 251 PEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSIS 309
PEV+ R+ + AD WS GV+++ +L G PF + IL+ + +S
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLS 250
Query: 310 PQAKDLVKKMLNSDPKQRLTA 330
P+A+ L++ + +P RL A
Sbjct: 251 PEAQSLLRMLFKRNPANRLGA 271
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 137/279 (49%), Gaps = 22/279 (7%)
Query: 71 GRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR-- 128
G+ E +++ Y G LG G FG + A K + K ++ + ++ + R
Sbjct: 43 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 129 -EVQIMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASL 185
EV ++ ++ G ++ L +E S L++E +LFD I +G E A S
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVG 244
+++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 218
Query: 245 SAYYIAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTS 302
+ Y PE ++ R +G A +WS+G++LY ++CG PF + E I+RG + F
Sbjct: 219 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ 272
Query: 303 DPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 273 ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 137/279 (49%), Gaps = 22/279 (7%)
Query: 71 GRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR-- 128
G+ E +++ Y G LG G FG + A K + K ++ + ++ + R
Sbjct: 16 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 129 -EVQIMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASL 185
EV ++ ++ G ++ L +E S L++E +LFD I +G E A S
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVG 244
+++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 191
Query: 245 SAYYIAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTS 302
+ Y PE ++ R +G A +WS+G++LY ++CG PF + E I+RG + F
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ 245
Query: 303 DPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 246 ----RVSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQD 280
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 137/279 (49%), Gaps = 22/279 (7%)
Query: 71 GRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR-- 128
G+ E +++ Y G LG G FG + A K + K ++ + ++ + R
Sbjct: 48 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 107
Query: 129 -EVQIMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASL 185
EV ++ ++ G ++ L +E S L++E +LFD I +G E A S
Sbjct: 108 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 167
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVG 244
+++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G
Sbjct: 168 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 223
Query: 245 SAYYIAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTS 302
+ Y PE ++ R +G A +WS+G++LY ++CG PF + E I+RG + F
Sbjct: 224 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ 277
Query: 303 DPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 278 ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 312
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 130/261 (49%), Gaps = 22/261 (8%)
Query: 79 ATYSFGKELGRGQFGITHLC---THKGTGQQFACKTIAKRKLVNKEDIE-DVRREVQIMH 134
+ + K LG+G FG L + Q +A K + K L ++ + + R++ +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE- 82
Query: 135 HLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
P IV+L A++ + ++L+++ GG+LF R+ + +TE L + +
Sbjct: 83 --VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD 140
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV----FYKQGEVFKDIVGSAYYIA 250
HS+G+I+RDLKPEN LL DE +K TDFGLS K+ F G+ Y+A
Sbjct: 141 HLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSF---CGTVEYMA 194
Query: 251 PEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSIS 309
PEV+ R+ + AD WS GV+++ +L G PF + IL+ + +S
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLS 250
Query: 310 PQAKDLVKKMLNSDPKQRLTA 330
P+A+ L++ + +P RL A
Sbjct: 251 PEAQSLLRMLFKRNPANRLGA 271
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 136/275 (49%), Gaps = 22/275 (8%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR---EVQ 131
E +++ Y G LG G FG + A K + K ++ + ++ + R EV
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 132 IMHHLT-GQPNIVELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTI 189
++ ++ G ++ L +E S L++E + +LFD I +G E A S +
Sbjct: 64 LLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQV 123
Query: 190 VQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYY 248
++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G+ Y
Sbjct: 124 LEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDGTRVY 179
Query: 249 IAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
PE ++ R +G A +WS+G++LY ++CG PF + E I+RG + F
Sbjct: 180 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ---- 229
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 230 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 130/261 (49%), Gaps = 22/261 (8%)
Query: 79 ATYSFGKELGRGQFGITHLC---THKGTGQQFACKTIAKRKLVNKEDIE-DVRREVQIMH 134
+ + K LG+G FG L + Q +A K + K L ++ + + R++ +
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE- 83
Query: 135 HLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
P IV+L A++ + ++L+++ GG+LF R+ + +TE L + +
Sbjct: 84 --VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD 141
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV----FYKQGEVFKDIVGSAYYIA 250
HS+G+I+RDLKPEN LL DE +K TDFGLS K+ F G+ Y+A
Sbjct: 142 HLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSF---CGTVEYMA 195
Query: 251 PEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSIS 309
PEV+ R+ + AD WS GV+++ +L G PF + IL+ + +S
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLS 251
Query: 310 PQAKDLVKKMLNSDPKQRLTA 330
P+A+ L++ + +P RL A
Sbjct: 252 PEAQSLLRMLFKRNPANRLGA 272
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 124/252 (49%), Gaps = 13/252 (5%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
++F LG+G FG L KGT + +A K + K ++ +D+E E +++ P
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 402
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+ +L ++ ++ VME GG+L I G + E A I + S G
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 462
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGL---SVFYKQGEVFKDIVGSAYYIAPEVLK-R 256
+I+RDLK +N +L D +K DFG+ +++ G K G+ YIAPE++ +
Sbjct: 463 IIYRDLKLDNVML---DSEGHIKIADFGMCKENIW--DGVTTKXFCGTPDYIAPEIIAYQ 517
Query: 257 KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLV 316
YG D W+ GV+LY +L G PF E E +F +I+ ++ + S+S +A +
Sbjct: 518 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAIC 573
Query: 317 KKMLNSDPKQRL 328
K ++ P +RL
Sbjct: 574 KGLMTKHPGKRL 585
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 134/267 (50%), Gaps = 11/267 (4%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHH 135
D K Y+ +++G+G G + TGQ+ A + + ++ KE I + E+ +M
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN---EILVMRE 74
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
PNIV +Y + +VME AGG L D ++ + E A++ R +Q +
Sbjct: 75 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 132
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSAYYIAPEVL 254
HS VIHRD+K +N LL + +K TDFG + +VG+ Y++APEV+
Sbjct: 133 LHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV 189
Query: 255 KRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAK 313
RK YGP+ DIWS+G+M ++ G PP+ E+ I +P +S +
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFR 248
Query: 314 DLVKKMLNSDPKQRLTATEVLAHPWIK 340
D + + L D ++R +A E++ H ++K
Sbjct: 249 DFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 135/275 (49%), Gaps = 22/275 (8%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR---EVQ 131
E +++ Y G LG G FG + A K + K ++ + ++ + R EV
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 132 IMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASLLRTI 189
++ ++ G ++ L +E S L++E +LFD I +G E A S +
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 190 VQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYY 248
++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G+ Y
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDGTRVY 180
Query: 249 IAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
PE ++ R +G A +WS+G++LY ++CG PF + E I+RG + F
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ---- 230
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 231 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 135/275 (49%), Gaps = 22/275 (8%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR---EVQ 131
E +++ Y G LG G FG + A K + K ++ + ++ + R EV
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 132 IMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASLLRTI 189
++ ++ G ++ L +E S L++E +LFD I +G E A S +
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 190 VQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYY 248
++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G+ Y
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDGTRVY 180
Query: 249 IAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
PE ++ R +G A +WS+G++LY ++CG PF + E I+RG + F
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ---- 230
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 231 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 135/275 (49%), Gaps = 22/275 (8%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR---EVQ 131
E +++ Y G LG G FG + A K + K ++ + ++ + R EV
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 132 IMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASLLRTI 189
++ ++ G ++ L +E S L++E +LFD I +G E A S +
Sbjct: 64 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 123
Query: 190 VQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYY 248
++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G+ Y
Sbjct: 124 LEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDGTRVY 179
Query: 249 IAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
PE ++ R +G A +WS+G++LY ++CG PF + E I+RG + F
Sbjct: 180 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ---- 229
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 230 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 135/275 (49%), Gaps = 22/275 (8%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR---EVQ 131
E +++ Y G LG G FG + A K + K ++ + ++ + R EV
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 132 IMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASLLRTI 189
++ ++ G ++ L +E S L++E +LFD I +G E A S +
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 190 VQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYY 248
++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G+ Y
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDGTRVY 180
Query: 249 IAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
PE ++ R +G A +WS+G++LY ++CG PF + E I+RG + F
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ---- 230
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 231 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 135/275 (49%), Gaps = 22/275 (8%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR---EVQ 131
E +++ Y G LG G FG + A K + K ++ + ++ + R EV
Sbjct: 27 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 86
Query: 132 IMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASLLRTI 189
++ ++ G ++ L +E S L++E +LFD I +G E A S +
Sbjct: 87 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 146
Query: 190 VQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYY 248
++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G+ Y
Sbjct: 147 LEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDGTRVY 202
Query: 249 IAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
PE ++ R +G A +WS+G++LY ++CG PF + E I+RG + F
Sbjct: 203 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ---- 252
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 253 RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 287
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 135/275 (49%), Gaps = 22/275 (8%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR---EVQ 131
E +++ Y G LG G FG + A K + K ++ + ++ + R EV
Sbjct: 3 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 132 IMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASLLRTI 189
++ ++ G ++ L +E S L++E +LFD I +G E A S +
Sbjct: 63 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 122
Query: 190 VQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYY 248
++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G+ Y
Sbjct: 123 LEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDGTRVY 178
Query: 249 IAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
PE ++ R +G A +WS+G++LY ++CG PF + E I+RG + F
Sbjct: 179 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ---- 228
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 229 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 263
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 134/267 (50%), Gaps = 11/267 (4%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHH 135
D K Y+ +++G+G G + TGQ+ A + + ++ KE I + E+ +M
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN---EILVMRE 74
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
PNIV +Y + +VME AGG L D ++ + E A++ R +Q +
Sbjct: 75 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 132
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSAYYIAPEVL 254
HS VIHR++K +N LL + +K TDFG + +VG+ Y++APEV+
Sbjct: 133 LHSNQVIHRNIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 189
Query: 255 KRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAK 313
RK YGP+ DIWS+G+M ++ G PP+ E+ I +P +S +
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFR 248
Query: 314 DLVKKMLNSDPKQRLTATEVLAHPWIK 340
D + + L D ++R +A E++ H ++K
Sbjct: 249 DFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 136/279 (48%), Gaps = 22/279 (7%)
Query: 71 GRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR-- 128
G+ E +++ Y G LG G FG + A K + K ++ + ++ + R
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 129 -EVQIMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASL 185
EV ++ ++ G ++ L +E S L++E +LFD I +G E A S
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVG 244
+++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 203
Query: 245 SAYYIAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTS 302
+ Y PE ++ R +G A +WS+G++LY ++CG PF + E I+ G + F
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ 257
Query: 303 DPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 258 ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 136/279 (48%), Gaps = 22/279 (7%)
Query: 71 GRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR-- 128
G+ E +++ Y G LG G FG + A K + K ++ + ++ + R
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 129 -EVQIMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASL 185
EV ++ ++ G ++ L +E S L++E +LFD I +G E A S
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVG 244
+++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 204
Query: 245 SAYYIAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTS 302
+ Y PE ++ R +G A +WS+G++LY ++CG PF + E I+ G + F
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ 258
Query: 303 DPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 259 ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 136/279 (48%), Gaps = 22/279 (7%)
Query: 71 GRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR-- 128
G+ E +++ Y G LG G FG + A K + K ++ + ++ + R
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 129 -EVQIMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASL 185
EV ++ ++ G ++ L +E S L++E +LFD I +G E A S
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVG 244
+++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 204
Query: 245 SAYYIAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTS 302
+ Y PE ++ R +G A +WS+G++LY ++CG PF + E I+ G + F
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ 258
Query: 303 DPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 259 ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 136/279 (48%), Gaps = 22/279 (7%)
Query: 71 GRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR-- 128
G+ E +++ Y G LG G FG + A K + K ++ + ++ + R
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 129 -EVQIMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASL 185
EV ++ ++ G ++ L +E S L++E +LFD I +G E A S
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVG 244
+++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 203
Query: 245 SAYYIAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTS 302
+ Y PE ++ R +G A +WS+G++LY ++CG PF + E I+ G + F
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ 257
Query: 303 DPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 258 ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 134/273 (49%), Gaps = 22/273 (8%)
Query: 77 VKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR---EVQIM 133
+++ Y G LG G FG + A K + K ++ + ++ + R EV ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 134 HHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASLLRTIVQ 191
++ G ++ L +E S L++E +LFD I +G E A S +++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 192 IIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G+ Y
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDGTRVYSP 177
Query: 251 PEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSI 308
PE ++ R +G A +WS+G++LY ++CG PF + E I+RG + F +
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RV 227
Query: 309 SPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
S + + L++ L P R T E+ HPW+++
Sbjct: 228 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 136/279 (48%), Gaps = 22/279 (7%)
Query: 71 GRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR-- 128
G+ E +++ Y G LG G FG + A K + K ++ + ++ + R
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 129 -EVQIMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASL 185
EV ++ ++ G ++ L +E S L++E +LFD I +G E A S
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVG 244
+++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 204
Query: 245 SAYYIAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTS 302
+ Y PE ++ R +G A +WS+G++LY ++CG PF + E I+ G + F
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ 258
Query: 303 DPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 259 ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 134/273 (49%), Gaps = 22/273 (8%)
Query: 77 VKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR---EVQIM 133
+++ Y G LG G FG + A K + K ++ + ++ + R EV ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 134 HHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASLLRTIVQ 191
++ G ++ L +E S L++E +LFD I +G E A S +++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 192 IIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G+ Y
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDGTRVYSP 177
Query: 251 PEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSI 308
PE ++ R +G A +WS+G++LY ++CG PF + E I+RG + F +
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RV 227
Query: 309 SPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
S + + L++ L P R T E+ HPW+++
Sbjct: 228 SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 136/279 (48%), Gaps = 22/279 (7%)
Query: 71 GRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR-- 128
G+ E +++ Y G LG G FG + A K + K ++ + ++ + R
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 129 -EVQIMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASL 185
EV ++ ++ G ++ L +E S L++E +LFD I +G E A S
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVG 244
+++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 204
Query: 245 SAYYIAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTS 302
+ Y PE ++ R +G A +WS+G++LY ++CG PF + E I+ G + F
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ 258
Query: 303 DPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 259 ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 136/279 (48%), Gaps = 22/279 (7%)
Query: 71 GRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR-- 128
G+ E +++ Y G LG G FG + A K + K ++ + ++ + R
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 129 -EVQIMHHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASL 185
EV ++ ++ G ++ L +E S L++E +LFD I +G E A S
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVG 244
+++ + CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDG 203
Query: 245 SAYYIAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTS 302
+ Y PE ++ R +G A +WS+G++LY ++CG PF + E I+ G + F
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ 257
Query: 303 DPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + L++ L P R T E+ HPW+++
Sbjct: 258 ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 134/259 (51%), Gaps = 12/259 (4%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
+++G G FG L G+Q+ K I ++ +KE E+ RREV ++ ++ PNIV+
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKER-EESRREVAVLANMK-HPNIVQ 87
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLRTIVQIIHTCHSMGVI 202
+ ++E+ S+++VM+ C GG+LF RI A+ + E I + H ++
Sbjct: 88 YRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKIL 147
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLKRK-YGP 260
HRD+K +N + L KD ++ DFG++ V E+ + +G+ YY++PE+ + K Y
Sbjct: 148 HRDIKSQN-IFLTKD--GTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNN 204
Query: 261 EADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKML 320
++DIW++G +LY L F A S + I+ G S + S + LV ++
Sbjct: 205 KSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHY---SYDLRSLVSQLF 261
Query: 321 NSDPKQRLTATEVLAHPWI 339
+P+ R + +L +I
Sbjct: 262 KRNPRDRPSVNSILEKGFI 280
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 127/250 (50%), Gaps = 16/250 (6%)
Query: 85 KELGRGQFGITHLC---THKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
K LG+G FG L T +G +A K + K L ++ + + E I+ + P
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVR-TKMERDILADVN-HPF 91
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGV 201
+V+L A++ + ++L+++ GG+LF R+ + +TE L + + HS+G+
Sbjct: 92 VVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGI 151
Query: 202 IHRDLKPENFLLLNKDENSPLKATDFGLS--VFYKQGEVFKDIVGSAYYIAPEVLKRK-Y 258
I+RDLKPEN LL DE +K TDFGLS + + + G+ Y+APEV+ R+ +
Sbjct: 152 IYRDLKPENILL---DEEGHIKLTDFGLSKEAIDHEKKAY-SFCGTVEYMAPEVVNRQGH 207
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
AD WS GV+++ +L G PF + IL+ + +S +A+ L++
Sbjct: 208 SHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ----FLSTEAQSLLRA 263
Query: 319 MLNSDPKQRL 328
+ +P RL
Sbjct: 264 LFKRNPANRL 273
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 133/273 (48%), Gaps = 11/273 (4%)
Query: 75 EDVKAT-YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM 133
EDV + + +G+G FG + T + +A K + K+K V + ++ +V +E+QIM
Sbjct: 10 EDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIM 69
Query: 134 HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQII 193
L P +V L +++D++ + +V++L GG+L + H+ E + +V +
Sbjct: 70 QGLE-HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMAL 128
Query: 194 HTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV 253
+ +IHRD+KP+N LL DE+ + TDF ++ + + G+ Y+APE+
Sbjct: 129 DYLQNQRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEM 185
Query: 254 LKRK----YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSIS 309
+ Y D WS+GV Y LL G P+ S + + P + S
Sbjct: 186 FSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP-SAWS 244
Query: 310 PQAKDLVKKMLNSDPKQRLTA-TEVLAHPWIKE 341
+ L+KK+L +P QR + ++V P++ +
Sbjct: 245 QEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND 277
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 129/252 (51%), Gaps = 22/252 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN-IV 143
K +GRG FG + K + FA K + K +++ + + R E ++ + G I
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVL--VNGDSKWIT 137
Query: 144 ELKGAYEDKQSVHLVMELCAGGELFDRIIA-KGHYTERAAASLLRTIVQIIHTCHSMGVI 202
L A++D +++LVM+ GG+L + + E A L +V I + H + +
Sbjct: 138 TLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYV 197
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDI-VGSAYYIAPEVL------ 254
HRD+KP+N L+ D N ++ DFG + + G V + VG+ YI+PE+L
Sbjct: 198 HRDIKPDNILM---DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGG 254
Query: 255 KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPS----ISP 310
K +YGPE D WS+GV +Y +L G PF+AES + I+ F +P+ +S
Sbjct: 255 KGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ---FPTQVTDVSE 311
Query: 311 QAKDLVKKMLNS 322
AKDL+++++ S
Sbjct: 312 NAKDLIRRLICS 323
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 133/290 (45%), Gaps = 31/290 (10%)
Query: 75 EDVKATYSFG-------KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR 127
E KA+ S G + +GRG + L K T + +A K + K + + EDI+ V+
Sbjct: 9 ESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQ 68
Query: 128 REVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
E + + P +V L ++ + + V+E GG+L + + E A
Sbjct: 69 TEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA 128
Query: 188 TIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGL-SVFYKQGEVFKDIVGSA 246
I ++ H G+I+RDLK +N LL D +K TD+G+ + G+ G+
Sbjct: 129 EISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP 185
Query: 247 YYIAPEVLK-RKYGPEADIWSIGVMLYILLCGVPPF---------WAESEHGIFNAILRG 296
YIAPE+L+ YG D W++GV+++ ++ G PF +E +F IL
Sbjct: 186 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 245
Query: 297 HIDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTA------TEVLAHPWIK 340
I S+S +A ++K LN DPK+RL ++ HP+ +
Sbjct: 246 QIRIPR----SMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFR 291
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 137/265 (51%), Gaps = 25/265 (9%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
++LG G +G + HK TGQ A K + + D++++ +E+ IM P++V+
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPV-----ESDLQEIIKEISIMQQCDS-PHVVK 88
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRI-IAKGHYTERAAASLLRTIVQIIHTCHSMGVIH 203
G+Y + +VME C G + D I + TE A++L++ ++ + H M IH
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIH 148
Query: 204 RDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKD-IVGSAYYIAPEVLKR-KYGPE 261
RD+K N +LLN + ++ K DFG++ ++ ++G+ +++APEV++ Y
Sbjct: 149 RDIKAGN-ILLNTEGHA--KLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCV 205
Query: 262 ADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSI------SPQAKDL 315
ADIWS+G+ + G PP+ H +R ++P P+ S D
Sbjct: 206 ADIWSLGITAIEMAEGKPPY--ADIHP-----MRAIFMIPTNPPPTFRKPELWSDNFTDF 258
Query: 316 VKKMLNSDPKQRLTATEVLAHPWIK 340
VK+ L P+QR TAT++L HP+++
Sbjct: 259 VKQCLVKSPEQRATATQLLQHPFVR 283
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 138/270 (51%), Gaps = 20/270 (7%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + M+ + + K +GRG FG + K T + +A K + K +++ + + R E
Sbjct: 81 LVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREE 140
Query: 130 VQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIA-KGHYTERAAASLLRT 188
++ + Q I L A++D+ ++LVM+ GG+L + + E A +
Sbjct: 141 RDVLVNGDCQW-ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGE 199
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDI-VGSA 246
+V I + H + +HRD+KP+N LL D N ++ DFG + G V + VG+
Sbjct: 200 MVLAIDSIHQLHYVHRDIKPDNVLL---DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTP 256
Query: 247 YYIAPEVLKR------KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDF 300
YI+PE+L+ KYGPE D WS+GV +Y +L G PF+AES + I+ F
Sbjct: 257 DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF 316
Query: 301 TSDPWPS----ISPQAKDLVKKMLNSDPKQ 326
+PS +S +AKDL+++++ S ++
Sbjct: 317 Q---FPSHVTDVSEEAKDLIQRLICSRERR 343
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 138/270 (51%), Gaps = 20/270 (7%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + M+ + + K +GRG FG + K T + +A K + K +++ + + R E
Sbjct: 65 LVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREE 124
Query: 130 VQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIA-KGHYTERAAASLLRT 188
++ + Q I L A++D+ ++LVM+ GG+L + + E A +
Sbjct: 125 RDVLVNGDCQW-ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGE 183
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDI-VGSA 246
+V I + H + +HRD+KP+N LL D N ++ DFG + G V + VG+
Sbjct: 184 MVLAIDSIHQLHYVHRDIKPDNVLL---DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTP 240
Query: 247 YYIAPEVLKR------KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDF 300
YI+PE+L+ KYGPE D WS+GV +Y +L G PF+AES + I+ F
Sbjct: 241 DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF 300
Query: 301 TSDPWPS----ISPQAKDLVKKMLNSDPKQ 326
+PS +S +AKDL+++++ S ++
Sbjct: 301 Q---FPSHVTDVSEEAKDLIQRLICSRERR 327
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 31/290 (10%)
Query: 75 EDVKATYSFG-------KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR 127
E KA+ S G + +GRG + L K T + +A + + K + + EDI+ V+
Sbjct: 41 ESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQ 100
Query: 128 REVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
E + + P +V L ++ + + V+E GG+L + + E A
Sbjct: 101 TEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA 160
Query: 188 TIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGL-SVFYKQGEVFKDIVGSA 246
I ++ H G+I+RDLK +N LL D +K TD+G+ + G+ G+
Sbjct: 161 EISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP 217
Query: 247 YYIAPEVLK-RKYGPEADIWSIGVMLYILLCGVPPF---------WAESEHGIFNAILRG 296
YIAPE+L+ YG D W++GV+++ ++ G PF +E +F IL
Sbjct: 218 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 277
Query: 297 HIDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTA------TEVLAHPWIK 340
I S+S +A ++K LN DPK+RL ++ HP+ +
Sbjct: 278 QIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 323
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 126/271 (46%), Gaps = 24/271 (8%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
+GRG + L K T + +A K + K + + EDI+ V+ E + + P +V L
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRDL 206
++ + + V+E GG+L + + E A I ++ H G+I+RDL
Sbjct: 73 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDL 132
Query: 207 KPENFLLLNKDENSPLKATDFGL-SVFYKQGEVFKDIVGSAYYIAPEVLK-RKYGPEADI 264
K +N LL D +K TD+G+ + G+ G+ YIAPE+L+ YG D
Sbjct: 133 KLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDW 189
Query: 265 WSIGVMLYILLCGVPPF---------WAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
W++GV+++ ++ G PF +E +F IL I S+S +A +
Sbjct: 190 WALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAASV 245
Query: 316 VKKMLNSDPKQRLTA------TEVLAHPWIK 340
+K LN DPK+RL ++ HP+ +
Sbjct: 246 LKSFLNKDPKERLGCHPQTGFADIQGHPFFR 276
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 126/271 (46%), Gaps = 24/271 (8%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
+GRG + L K T + +A K + K + + EDI+ V+ E + + P +V L
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRDL 206
++ + + V+E GG+L + + E A I ++ H G+I+RDL
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDL 136
Query: 207 KPENFLLLNKDENSPLKATDFGL-SVFYKQGEVFKDIVGSAYYIAPEVLK-RKYGPEADI 264
K +N LL D +K TD+G+ + G+ G+ YIAPE+L+ YG D
Sbjct: 137 KLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDW 193
Query: 265 WSIGVMLYILLCGVPPF---------WAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
W++GV+++ ++ G PF +E +F IL I S+S +A +
Sbjct: 194 WALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAASV 249
Query: 316 VKKMLNSDPKQRLTA------TEVLAHPWIK 340
+K LN DPK+RL ++ HP+ +
Sbjct: 250 LKSFLNKDPKERLGCHPQTGFADIQGHPFFR 280
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 77 VKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR---EVQIM 133
+++ Y G LG G FG + A K + K ++ + ++ + R EV ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 134 HHLT-GQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASLLRTIVQ 191
++ G ++ L +E S L++E +LFD I +G E A S +++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 192 IIHTCHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G+ Y
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDGTRVYSP 177
Query: 251 PEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSI 308
PE ++ R +G A +WS+G++LY ++CG PF + E I+ G + F +
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RV 227
Query: 309 SPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
S + + L++ L P R T E+ HPW+++
Sbjct: 228 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 134/282 (47%), Gaps = 29/282 (10%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH 134
ED + Y+ +G G +G K G+ K + + E + + EV ++
Sbjct: 6 EDYEVLYT----IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEK-QMLVSEVNLLR 60
Query: 135 HLTGQPNIVELKGAYEDKQ--SVHLVMELCAGGELFDRIIAKGHYTERAAAS---LLRTI 189
L PNIV D+ ++++VME C GG+L +I KG ER +LR +
Sbjct: 61 ELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGT-KERQYLDEEFVLRVM 117
Query: 190 VQI---IHTCHSMG-----VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF-K 240
Q+ + CH V+HRDLKP N L D +K DFGL+ E F K
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDEDFAK 174
Query: 241 DIVGSAYYIAPEVLKR-KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHID 299
+ VG+ YY++PE + R Y ++DIWS+G +LY L +PPF A S+ + I G
Sbjct: 175 EFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK-- 232
Query: 300 FTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
F P+ S + +++ +MLN R + E+L +P I E
Sbjct: 233 FRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 134/293 (45%), Gaps = 43/293 (14%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR----REVQIMHHLTGQPNI 142
+G G +G+ C +K TG + +A +K + +D + V+ RE++++ L + N+
Sbjct: 33 VGEGSYGMVMKCRNKDTG-----RIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHE-NL 86
Query: 143 VELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
V L + K+ +LV E L D + + L I+ I CHS +I
Sbjct: 87 VNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNII 146
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVL--KRKYG 259
HRD+KPEN L+ ++ +K DFG + GEV+ D V + +Y APE+L KYG
Sbjct: 147 HRDIKPENILV---SQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYG 203
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESE--------HGIFNAILRGHIDFTSDP------- 304
D+W+IG ++ + G P F +S+ + N I R F +P
Sbjct: 204 KAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRL 263
Query: 305 ------------WPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEA 345
+P +S DL KK L+ DP +R E+L H + + DG A
Sbjct: 264 PEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFA 316
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 137 TGQPNIVELKGAYEDKQSVHLVMELCAG-GELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
+G ++ L +E S L++E +LFD I +G E A S +++ +
Sbjct: 113 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 196 CHSMGVIHRDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVL 254
CH+ GV+HRD+K EN L+ LN+ E LK DFG K V+ D G+ Y PE +
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWI 228
Query: 255 K--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQA 312
+ R +G A +WS+G++LY ++CG PF + E I+RG + F +S +
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 278
Query: 313 KDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+ L++ L P R T E+ HPW+++
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 132/282 (46%), Gaps = 29/282 (10%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH 134
ED + Y+ +G G +G K G+ K + + E + + EV ++
Sbjct: 6 EDYEVLYT----IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEK-QMLVSEVNLLR 60
Query: 135 HLTGQPNIVELKGAYEDKQ--SVHLVMELCAGGELFDRIIAKGHYTERAAAS---LLRTI 189
L PNIV D+ ++++VME C GG+L +I KG ER +LR +
Sbjct: 61 ELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGT-KERQYLDEEFVLRVM 117
Query: 190 VQI---IHTCHSMG-----VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF-K 240
Q+ + CH V+HRDLKP N L D +K DFGL+ F K
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDTSFAK 174
Query: 241 DIVGSAYYIAPEVLKR-KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHID 299
VG+ YY++PE + R Y ++DIWS+G +LY L +PPF A S+ + I G
Sbjct: 175 TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK-- 232
Query: 300 FTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
F P+ S + +++ +MLN R + E+L +P I E
Sbjct: 233 FRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 127/269 (47%), Gaps = 22/269 (8%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIED-----VRREVQIMHH 135
YS LG G FG K ++ K I K K++ IED V E+ I+
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGG-ELFDRIIAKGHYTERAAASLLRTIVQIIH 194
+ NI+++ +E++ LVME G +LF I E A+ + R +V +
Sbjct: 86 VE-HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVG 144
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVL 254
+IHRD+K EN ++ E+ +K DFG + + ++G++F G+ Y APEVL
Sbjct: 145 YLRLKDIIHRDIKDENIVI---AEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVL 201
Query: 255 --KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQA 312
GPE ++WS+GV LY L+ PF E E + AI ++ +S +
Sbjct: 202 MGNPYRGPELEMWSLGVTLYTLVFEENPF-CELEETVEAAIHPPYL---------VSKEL 251
Query: 313 KDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
LV +L P++R T +++ PW+ +
Sbjct: 252 MSLVSGLLQPVPERRTTLEKLVTDPWVTQ 280
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 132/282 (46%), Gaps = 29/282 (10%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH 134
ED + Y+ +G G +G K G+ K + + E + + EV ++
Sbjct: 6 EDYEVLYT----IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEK-QMLVSEVNLLR 60
Query: 135 HLTGQPNIVELKGAYEDKQ--SVHLVMELCAGGELFDRIIAKGHYTERAAAS---LLRTI 189
L PNIV D+ ++++VME C GG+L +I KG ER +LR +
Sbjct: 61 ELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGT-KERQYLDEEFVLRVM 117
Query: 190 VQI---IHTCHSMG-----VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF-K 240
Q+ + CH V+HRDLKP N L D +K DFGL+ F K
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDTSFAK 174
Query: 241 DIVGSAYYIAPEVLKR-KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHID 299
VG+ YY++PE + R Y ++DIWS+G +LY L +PPF A S+ + I G
Sbjct: 175 AFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK-- 232
Query: 300 FTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
F P+ S + +++ +MLN R + E+L +P I E
Sbjct: 233 FRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 144/287 (50%), Gaps = 31/287 (10%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
K +GRG F + K TGQ +A K + K ++ + ++ R E ++ + + I +
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN-GDRRWITQ 125
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR----TIVQIIHTCHSMG 200
L A++D+ ++LVME GG+L +++K + ER A + R IV I + H +G
Sbjct: 126 LHFAFQDENYLYLVMEYYVGGDLL-TLLSK--FGERIPAEMARFYLAEIVMAIDSVHRLG 182
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV--GSAYYIAPEVLK--- 255
+HRD+KP+N LL D ++ DFG + + + +V G+ Y++PE+L+
Sbjct: 183 YVHRDIKPDNILL---DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVG 239
Query: 256 -----RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPW--PSI 308
YGPE D W++GV Y + G PF+A+S + I+ + + S P +
Sbjct: 240 GGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVH-YKEHLSLPLVDEGV 298
Query: 309 SPQAKDLVKKMLNSDPKQRL---TATEVLAHPW---IKEDGEAPDVP 349
+A+D ++++L P+ RL A + HP+ + DG VP
Sbjct: 299 PEEARDFIQRLL-CPPETRLGRGGAGDFRTHPFFFGLDWDGLRDSVP 344
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 139/293 (47%), Gaps = 48/293 (16%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM---HHLT 137
Y + +G G + ++ A K I K + ++++ +E+Q M HH
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCHH-- 72
Query: 138 GQPNIVELKGAYEDKQSVHLVMELCAGGELFD---RIIAKGHYT-----ERAAASLLRTI 189
PNIV ++ K + LVM+L +GG + D I+AKG + E A++LR +
Sbjct: 73 --PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 190 VQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQG------EVFKDIV 243
++ + H G IHRD+K N LL E+ ++ DFG+S F G +V K V
Sbjct: 131 LEGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 187
Query: 244 GSAYYIAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFT 301
G+ ++APEV++ R Y +ADIWS G+ L G P+ + L+
Sbjct: 188 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQ------ 241
Query: 302 SDPWPSISP--QAKDLVKKM-----------LNSDPKQRLTATEVLAHPWIKE 341
+DP PS+ Q K+++KK L DP++R TA E+L H + ++
Sbjct: 242 NDP-PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 293
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 140/346 (40%), Gaps = 91/346 (26%)
Query: 71 GRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREV 130
GR V Y K+LG+G +GI + TG+ A K I N D + RE+
Sbjct: 1 GRVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFD-AFQNSTDAQRTFREI 59
Query: 131 QIMHHLTGQPNIVELKGAY--EDKQSVHLVMELCAGGELFDRIIAKGHYTERA------- 181
I+ L+G NIV L ++ + V+LV FD + H RA
Sbjct: 60 MILTELSGHENIVNLLNVLRADNDRDVYLV---------FDYMETDLHAVIRANILEPVH 110
Query: 182 AASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV---------- 231
++ ++++I HS G++HRD+KP N LL + +K DFGLS
Sbjct: 111 KQYVVYQLIKVIKYLHSGGLLHRDMKPSNILL---NAECHVKVADFGLSRSFVNIRRVTN 167
Query: 232 ------------FYKQGEVFKDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCG 277
F + D V + +Y APE+L KY D+WS+G +L +LCG
Sbjct: 168 NIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227
Query: 278 VPPFWAESEHGIFNAILRGHIDFTSD---------------------------------- 303
P F S I+ G IDF S+
Sbjct: 228 KPIFPGSSTMNQLERII-GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFT 286
Query: 304 PWPS----ISPQAK------DLVKKMLNSDPKQRLTATEVLAHPWI 339
W + I+P+A DL+ K+L +P +R++A + L HP++
Sbjct: 287 KWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFV 332
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 139/293 (47%), Gaps = 48/293 (16%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM---HHLT 137
Y + +G G + ++ A K I K + ++++ +E+Q M HH
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCHH-- 67
Query: 138 GQPNIVELKGAYEDKQSVHLVMELCAGGELFD---RIIAKGHYT-----ERAAASLLRTI 189
PNIV ++ K + LVM+L +GG + D I+AKG + E A++LR +
Sbjct: 68 --PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 125
Query: 190 VQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQG------EVFKDIV 243
++ + H G IHRD+K N LL E+ ++ DFG+S F G +V K V
Sbjct: 126 LEGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 182
Query: 244 GSAYYIAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFT 301
G+ ++APEV++ R Y +ADIWS G+ L G P+ + L+
Sbjct: 183 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQ------ 236
Query: 302 SDPWPSISP--QAKDLVKKM-----------LNSDPKQRLTATEVLAHPWIKE 341
+DP PS+ Q K+++KK L DP++R TA E+L H + ++
Sbjct: 237 NDP-PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 288
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 129/289 (44%), Gaps = 40/289 (13%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + G+ FA K I K E I RE+ I+ L NIV
Sbjct: 8 EKIGEGTYGVVY-KAQNNYGETFALKKIRLEK--EDEGIPSTTIREISILKELK-HSNIV 63
Query: 144 ELKGAYEDKQSVHLVMELCAGG--ELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGV 201
+L K+ + LV E +L D + +G A S L ++ I CH V
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 202 IHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVL--KRKY 258
+HRDLKP+N LL+N++ LK DFGL+ F + V + +Y AP+VL +KY
Sbjct: 122 LHRDLKPQN-LLINRE--GELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAK----- 313
DIWS+G + ++ G P F SE I R S WP+++ K
Sbjct: 179 STTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238
Query: 314 --------------------DLVKKMLNSDPKQRLTATEVLAHPWIKED 342
DL+ KML DP QR+TA + L H + KE+
Sbjct: 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 129/289 (44%), Gaps = 40/289 (13%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + G+ FA K I K E I RE+ I+ L NIV
Sbjct: 8 EKIGEGTYGVVY-KAQNNYGETFALKKIRLEK--EDEGIPSTTIREISILKELK-HSNIV 63
Query: 144 ELKGAYEDKQSVHLVMELCAGG--ELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGV 201
+L K+ + LV E +L D + +G A S L ++ I CH V
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 202 IHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVL--KRKY 258
+HRDLKP+N LL+N++ LK DFGL+ F + V + +Y AP+VL +KY
Sbjct: 122 LHRDLKPQN-LLINRE--GELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAK----- 313
DIWS+G + ++ G P F SE I R S WP+++ K
Sbjct: 179 STTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238
Query: 314 --------------------DLVKKMLNSDPKQRLTATEVLAHPWIKED 342
DL+ KML DP QR+TA + L H + KE+
Sbjct: 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 131/271 (48%), Gaps = 20/271 (7%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
ELG G FG + +K T A K I + ++E++ED E+ I+ PNIV+L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDHPNIVKL 99
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLRTIVQIIHTCHSMGVIH 203
A+ + ++ +++E CAGG + D ++ + TE + + + ++ H +IH
Sbjct: 100 LDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 204 RDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKD-IVGSAYYIAPEVL------K 255
RDLK N L L+ D +K DFG+S + +D +G+ Y++APEV+
Sbjct: 159 RDLKAGNILFTLDGD----IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 256 RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
R Y +AD+WS+G+ L + PP + + I + + P S KD
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDF 273
Query: 316 VKKMLNSDPKQRLTATEVLAHPWIKEDGEAP 346
+KK L + R T +++L HP++ D P
Sbjct: 274 LKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 131/271 (48%), Gaps = 20/271 (7%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
ELG G FG + +K T A K I + ++E++ED E+ I+ PNIV+L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDHPNIVKL 99
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLRTIVQIIHTCHSMGVIH 203
A+ + ++ +++E CAGG + D ++ + TE + + + ++ H +IH
Sbjct: 100 LDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 204 RDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKD-IVGSAYYIAPEVL------K 255
RDLK N L L+ D +K DFG+S + +D +G+ Y++APEV+
Sbjct: 159 RDLKAGNILFTLDGD----IKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 256 RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
R Y +AD+WS+G+ L + PP + + I + + P S KD
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDF 273
Query: 316 VKKMLNSDPKQRLTATEVLAHPWIKEDGEAP 346
+KK L + R T +++L HP++ D P
Sbjct: 274 LKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 131/271 (48%), Gaps = 20/271 (7%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
ELG G FG + +K T A K I + ++E++ED E+ I+ PNIV+L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDHPNIVKL 99
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLRTIVQIIHTCHSMGVIH 203
A+ + ++ +++E CAGG + D ++ + TE + + + ++ H +IH
Sbjct: 100 LDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 204 RDLKPENFLL-LNKDENSPLKATDFGLSVFYKQGEVFKD-IVGSAYYIAPEVL------K 255
RDLK N L L+ D +K DFG+S + +D +G+ Y++APEV+
Sbjct: 159 RDLKAGNILFTLDGD----IKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKD 214
Query: 256 RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
R Y +AD+WS+G+ L + PP + + I + + P S KD
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDF 273
Query: 316 VKKMLNSDPKQRLTATEVLAHPWIKEDGEAP 346
+KK L + R T +++L HP++ D P
Sbjct: 274 LKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 127/249 (51%), Gaps = 12/249 (4%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LGRG FG C K TG+ +ACK + K++L ++ + E +I+ + + IV L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGH----YTERAAASLLRTIVQIIHTCHSMGVI 202
A+E K + LVM + GG++ I + E A IV + H +I
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEV-FKDIVGSAYYIAPE-VLKRKYGP 260
+RDLKPEN LL D++ ++ +D GL+V K G+ K G+ ++APE +L +Y
Sbjct: 312 YRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 261 EADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPS-ISPQAKDLVKKM 319
D +++GV LY ++ PF A E + N L+ + + +P SP +KD + +
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 320 LNSDPKQRL 328
L DP++RL
Sbjct: 428 LQKDPEKRL 436
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 129/289 (44%), Gaps = 40/289 (13%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + G+ FA K I K E I RE+ I+ L NIV
Sbjct: 8 EKIGEGTYGVVY-KAQNNYGETFALKKIRLEK--EDEGIPSTTIREISILKELK-HSNIV 63
Query: 144 ELKGAYEDKQSVHLVMELCAGG--ELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGV 201
+L K+ + LV E +L D + +G A S L ++ I CH V
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 202 IHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVL--KRKY 258
+HRDLKP+N LL+N++ LK DFGL+ F + + + +Y AP+VL +KY
Sbjct: 122 LHRDLKPQN-LLINRE--GELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKY 178
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAK----- 313
DIWS+G + ++ G P F SE I R S WP+++ K
Sbjct: 179 STTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238
Query: 314 --------------------DLVKKMLNSDPKQRLTATEVLAHPWIKED 342
DL+ KML DP QR+TA + L H + KE+
Sbjct: 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 127/249 (51%), Gaps = 12/249 (4%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LGRG FG C K TG+ +ACK + K++L ++ + E +I+ + + IV L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGH----YTERAAASLLRTIVQIIHTCHSMGVI 202
A+E K + LVM + GG++ I + E A IV + H +I
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEV-FKDIVGSAYYIAPE-VLKRKYGP 260
+RDLKPEN LL D++ ++ +D GL+V K G+ K G+ ++APE +L +Y
Sbjct: 312 YRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 261 EADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPS-ISPQAKDLVKKM 319
D +++GV LY ++ PF A E + N L+ + + +P SP +KD + +
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 320 LNSDPKQRL 328
L DP++RL
Sbjct: 428 LQKDPEKRL 436
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 127/249 (51%), Gaps = 12/249 (4%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LGRG FG C K TG+ +ACK + K++L ++ + E +I+ + + IV L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGH----YTERAAASLLRTIVQIIHTCHSMGVI 202
A+E K + LVM + GG++ I + E A IV + H +I
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEV-FKDIVGSAYYIAPE-VLKRKYGP 260
+RDLKPEN LL D++ ++ +D GL+V K G+ K G+ ++APE +L +Y
Sbjct: 312 YRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 261 EADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPS-ISPQAKDLVKKM 319
D +++GV LY ++ PF A E + N L+ + + +P SP +KD + +
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 320 LNSDPKQRL 328
L DP++RL
Sbjct: 428 LQKDPEKRL 436
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 127/249 (51%), Gaps = 12/249 (4%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LGRG FG C K TG+ +ACK + K++L ++ + E +I+ + + IV L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGH----YTERAAASLLRTIVQIIHTCHSMGVI 202
A+E K + LVM + GG++ I + E A IV + H +I
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEV-FKDIVGSAYYIAPE-VLKRKYGP 260
+RDLKPEN LL D++ ++ +D GL+V K G+ K G+ ++APE +L +Y
Sbjct: 312 YRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 261 EADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPS-ISPQAKDLVKKM 319
D +++GV LY ++ PF A E + N L+ + + +P SP +KD + +
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 320 LNSDPKQRL 328
L DP++RL
Sbjct: 428 LQKDPEKRL 436
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 137/299 (45%), Gaps = 53/299 (17%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y ++LGRG++ + ++ K + K V K I +RE++I+ +L G P
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKIL---KPVKKNKI---KREIKILENLRGGP 92
Query: 141 NIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
NI+ L +D ++ LV E + F ++ T+ + I++ + CHS
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCHS 149
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVL--KR 256
MG++HRD+KP N ++ E+ L+ D+GL+ FY G+ + V S Y+ PE+L +
Sbjct: 150 MGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 257 KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-----------GHID---FTS 302
Y D+WS+G ML ++ PF+ H ++ ++R +ID
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL 265
Query: 303 DP-------------WPS---------ISPQAKDLVKKMLNSDPKQRLTATEVLAHPWI 339
DP W +SP+A D + K+L D + RLTA E + HP+
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 139/326 (42%), Gaps = 58/326 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAK--RKLVNKEDIEDVRRE 129
R + ++ + + LG G +G+ THK TG+ A K I + L + RE
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL----RE 59
Query: 130 VQIMHHLTGQPNIVEL-----KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAAS 184
++I+ H + NI+ + ++E+ V+++ EL R+I+ ++
Sbjct: 60 IKILKHFKHE-NIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQY 116
Query: 185 LLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEV------ 238
+ ++ + H VIHRDLKP N L+ + N LK DFGL+ +
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 239 -----FKDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPF----WAESEH 287
+ V + +Y APEV+ KY D+WS G +L L P F +
Sbjct: 174 GQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL 233
Query: 288 GIFNAILRGHID--------------------FTSDP----WPSISPQAKDLVKKMLNSD 323
IF I H D + + P +P ++P+ DL+++ML D
Sbjct: 234 LIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFD 293
Query: 324 PKQRLTATEVLAHPWIKEDGEAPDVP 349
P +R+TA E L HP+++ + D P
Sbjct: 294 PAKRITAKEALEHPYLQTYHDPNDEP 319
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 139/326 (42%), Gaps = 58/326 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAK--RKLVNKEDIEDVRRE 129
R + ++ + + LG G +G+ THK TG+ A K I + L + RE
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL----RE 59
Query: 130 VQIMHHLTGQPNIVEL-----KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAAS 184
++I+ H + NI+ + ++E+ V+++ EL R+I+ ++
Sbjct: 60 IKILKHFKHE-NIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQY 116
Query: 185 LLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEV------ 238
+ ++ + H VIHRDLKP N L+ + N LK DFGL+ +
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 239 -----FKDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPF----WAESEH 287
+ V + +Y APEV+ KY D+WS G +L L P F +
Sbjct: 174 GQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL 233
Query: 288 GIFNAILRGHID--------------------FTSDP----WPSISPQAKDLVKKMLNSD 323
IF I H D + + P +P ++P+ DL+++ML D
Sbjct: 234 LIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFD 293
Query: 324 PKQRLTATEVLAHPWIKEDGEAPDVP 349
P +R+TA E L HP+++ + D P
Sbjct: 294 PAKRITAKEALEHPYLQTYHDPNDEP 319
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 139/326 (42%), Gaps = 58/326 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAK--RKLVNKEDIEDVRRE 129
R + ++ + + LG G +G+ THK TG+ A K I + L + RE
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL----RE 59
Query: 130 VQIMHHLTGQPNIVEL-----KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAAS 184
++I+ H + NI+ + ++E+ V+++ EL R+I+ ++
Sbjct: 60 IKILKHFKHE-NIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQY 116
Query: 185 LLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEV------ 238
+ ++ + H VIHRDLKP N L+ + N LK DFGL+ +
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 239 -----FKDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPF----WAESEH 287
+ V + +Y APEV+ KY D+WS G +L L P F +
Sbjct: 174 GQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL 233
Query: 288 GIFNAILRGHID--------------------FTSDP----WPSISPQAKDLVKKMLNSD 323
IF I H D + + P +P ++P+ DL+++ML D
Sbjct: 234 LIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFD 293
Query: 324 PKQRLTATEVLAHPWIKEDGEAPDVP 349
P +R+TA E L HP+++ + D P
Sbjct: 294 PAKRITAKEALEHPYLQTYHDPNDEP 319
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 137/278 (49%), Gaps = 28/278 (10%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHH 135
D + ELG G FG + +K TG A K I + ++E++ED E++I+
Sbjct: 16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILA- 71
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRTIVQII 193
P IV+L GAY + +++E C GG + D I+ + TE + R +++ +
Sbjct: 72 TCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEAL 130
Query: 194 HTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSAYYIAPE 252
+ HS +IHRDLK N L+ + + ++ DFG+S K + +G+ Y++APE
Sbjct: 131 NFLHSKRIIHRDLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 187
Query: 253 VL------KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
V+ Y +ADIWS+G+ L + PP + + I + SDP
Sbjct: 188 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK------SDPPT 241
Query: 307 SISP-----QAKDLVKKMLNSDPKQRLTATEVLAHPWI 339
++P + +D +K L+ +P+ R +A ++L HP++
Sbjct: 242 LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 137/278 (49%), Gaps = 28/278 (10%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHH 135
D + ELG G FG + +K TG A K I + ++E++ED E++I+
Sbjct: 8 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILA- 63
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRTIVQII 193
P IV+L GAY + +++E C GG + D I+ + TE + R +++ +
Sbjct: 64 TCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEAL 122
Query: 194 HTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFKDIVGSAYYIAPE 252
+ HS +IHRDLK N L+ + + ++ DFG+S K + +G+ Y++APE
Sbjct: 123 NFLHSKRIIHRDLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 179
Query: 253 VL------KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP 306
V+ Y +ADIWS+G+ L + PP + + I + SDP
Sbjct: 180 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK------SDPPT 233
Query: 307 SISP-----QAKDLVKKMLNSDPKQRLTATEVLAHPWI 339
++P + +D +K L+ +P+ R +A ++L HP++
Sbjct: 234 LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 59/75 (78%)
Query: 375 IAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADG 434
+A LSEEEI GLKE+FK IDTDNSGTIT +ELK GL + G++L E E K LM+AAD D
Sbjct: 13 MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDK 72
Query: 435 NGTIDYHEFITATMH 449
+GTIDY EFI AT+H
Sbjct: 73 SGTIDYGEFIAATVH 87
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 139/327 (42%), Gaps = 77/327 (23%)
Query: 71 GRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR--- 127
G+ E + Y+ K +G G FG+ F K + ++ K+ ++D R
Sbjct: 32 GKTGEQREIAYTNCKVIGNGSFGVV-----------FQAKLVESDEVAIKKVLQDKRFKN 80
Query: 128 REVQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERA 181
RE+QIM + PN+V+LK + +D+ ++LV+E E R A HY +
Sbjct: 81 RELQIMR-IVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP--ETVYR--ASRHYAKLK 135
Query: 182 AA-----------SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS 230
LLR++ I HS+G+ HRD+KP+N LL + LK DFG +
Sbjct: 136 QTMPMLLIKLYMYQLLRSLAYI----HSIGICHRDIKPQNLLL--DPPSGVLKLIDFGSA 189
Query: 231 VFYKQGEVFKDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHG 288
GE + S YY APE++ Y DIWS G ++ L+ G P F ES G
Sbjct: 190 KILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES--G 247
Query: 289 IFNAI----------------------------LRGHIDFTSDPWPSISPQAKDLVKKML 320
I + +R H F+ P P A DL+ ++L
Sbjct: 248 IDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPH-PFSKVFRPRTPPDAIDLISRLL 306
Query: 321 NSDPKQRLTATEVLAHPWIKE--DGEA 345
P RLTA E L HP+ E GEA
Sbjct: 307 EYTPSARLTAIEALCHPFFDELRTGEA 333
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQ- 139
+S + +GRG FG + C TG+ +A K + K+++ K+ E + +IM L
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTG 248
Query: 140 --PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCH 197
P IV + A+ + +++L GG+L + G ++E I+ + H
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 308
Query: 198 SMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKR- 256
+ V++RDLKP N LL DE+ ++ +D GL+ + + + VG+ Y+APEVL++
Sbjct: 309 NRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 364
Query: 257 -KYGPEADIWSIGVMLYILLCGVPPFW---AESEHGIFNAILRGHIDFTSDPWPSISPQA 312
Y AD +S+G ML+ LL G PF + +H I L ++ S SP+
Sbjct: 365 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD----SFSPEL 420
Query: 313 KDLVKKMLNSDPKQRL-----TATEVLAHPWIK 340
+ L++ +L D +RL A EV P+ +
Sbjct: 421 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 453
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQ- 139
+S + +GRG FG + C TG+ +A K + K+++ K+ E + +IM L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTG 249
Query: 140 --PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCH 197
P IV + A+ + +++L GG+L + G ++E I+ + H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 198 SMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKR- 256
+ V++RDLKP N LL DE+ ++ +D GL+ + + + VG+ Y+APEVL++
Sbjct: 310 NRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 257 -KYGPEADIWSIGVMLYILLCGVPPFW---AESEHGIFNAILRGHIDFTSDPWPSISPQA 312
Y AD +S+G ML+ LL G PF + +H I L ++ S SP+
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD----SFSPEL 421
Query: 313 KDLVKKMLNSDPKQRL-----TATEVLAHPWIK 340
+ L++ +L D +RL A EV P+ +
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQ- 139
+S + +GRG FG + C TG+ +A K + K+++ K+ E + +IM L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTG 249
Query: 140 --PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCH 197
P IV + A+ + +++L GG+L + G ++E I+ + H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 198 SMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKR- 256
+ V++RDLKP N LL DE+ ++ +D GL+ + + + VG+ Y+APEVL++
Sbjct: 310 NRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 257 -KYGPEADIWSIGVMLYILLCGVPPFW---AESEHGIFNAILRGHIDFTSDPWPSISPQA 312
Y AD +S+G ML+ LL G PF + +H I L ++ S SP+
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD----SFSPEL 421
Query: 313 KDLVKKMLNSDPKQRL-----TATEVLAHPWIK 340
+ L++ +L D +RL A EV P+ +
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQ- 139
+S + +GRG FG + C TG+ +A K + K+++ K+ E + +IM L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTG 249
Query: 140 --PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCH 197
P IV + A+ + +++L GG+L + G ++E I+ + H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 198 SMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKR- 256
+ V++RDLKP N LL DE+ ++ +D GL+ + + + VG+ Y+APEVL++
Sbjct: 310 NRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 257 -KYGPEADIWSIGVMLYILLCGVPPFW---AESEHGIFNAILRGHIDFTSDPWPSISPQA 312
Y AD +S+G ML+ LL G PF + +H I L ++ S SP+
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD----SFSPEL 421
Query: 313 KDLVKKMLNSDPKQRL-----TATEVLAHPWIK 340
+ L++ +L D +RL A EV P+ +
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 128/268 (47%), Gaps = 21/268 (7%)
Query: 90 GQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELKGAY 149
G FG + +K T A K I + ++E++ED E+ I+ PNIV+L A+
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDHPNIVKLLDAF 76
Query: 150 EDKQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLRTIVQIIHTCHSMGVIHRDLK 207
+ ++ +++E CAGG + D ++ + TE + + + ++ H +IHRDLK
Sbjct: 77 YYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 135
Query: 208 PENFLL-LNKDENSPLKATDFGLSVFYKQGEVFK--DIVGSAYYIAPEVL------KRKY 258
N L L+ D +K DFG+S + + + +G+ Y++APEV+ R Y
Sbjct: 136 AGNILFTLDGD----IKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 191
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKK 318
+AD+WS+G+ L + PP + + I + + P S KD +KK
Sbjct: 192 DYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFLKK 250
Query: 319 MLNSDPKQRLTATEVLAHPWIKEDGEAP 346
L + R T +++L HP++ D P
Sbjct: 251 CLEKNVDARWTTSQLLQHPFVTVDSNKP 278
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 110/246 (44%), Gaps = 27/246 (10%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G FG H+ TG+Q A K R+ ++ ++ E E+QIM L P
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC--RQELSPKNRERWCLEIQIMKKLN-HP 73
Query: 141 NIVELKGAYEDKQSVH------LVMELCAGGEL---FDRIIAKGHYTERAAASLLRTIVQ 191
N+V + + Q + L ME C GG+L ++ E +LL I
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 133
Query: 192 IIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAP 251
+ H +IHRDLKPEN +L + K D G + QGE+ + VG+ Y+AP
Sbjct: 134 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 193
Query: 252 EVL-KRKYGPEADIWSIGVMLYILLCGVPPF---WA-----------ESEHGIFNAILRG 296
E+L ++KY D WS G + + + G PF W +EH + L G
Sbjct: 194 ELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTG 253
Query: 297 HIDFTS 302
+ F+S
Sbjct: 254 AVKFSS 259
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 110/246 (44%), Gaps = 27/246 (10%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
+ + LG G FG H+ TG+Q A K R+ ++ ++ E E+QIM L P
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC--RQELSPKNRERWCLEIQIMKKLN-HP 72
Query: 141 NIVELKGAYEDKQSVH------LVMELCAGGEL---FDRIIAKGHYTERAAASLLRTIVQ 191
N+V + + Q + L ME C GG+L ++ E +LL I
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 192 IIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAP 251
+ H +IHRDLKPEN +L + K D G + QGE+ + VG+ Y+AP
Sbjct: 133 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 192
Query: 252 EVL-KRKYGPEADIWSIGVMLYILLCGVPPF---WA-----------ESEHGIFNAILRG 296
E+L ++KY D WS G + + + G PF W +EH + L G
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTG 252
Query: 297 HIDFTS 302
+ F+S
Sbjct: 253 AVKFSS 258
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 137/291 (47%), Gaps = 54/291 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFAC----KTIAKRKLVNKED-----IEDVRREVQ 131
YS K++G G G+ + F K I K VN E+ ++ R E+
Sbjct: 58 YSILKQIGSG-----------GSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 106
Query: 132 IMHHLTGQPN-IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ L + I+ L Q +++VME C +L + K S + ++
Sbjct: 107 YLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNML 165
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK--QGEVFKDI-VGSAY 247
+ +HT H G++H DLKP NFL++ + LK DFG++ + V KD VG+
Sbjct: 166 EAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 221
Query: 248 YIAPEVLK-----RKYG-------PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR 295
Y+ PE +K R+ G P++D+WS+G +LY + G PF I N I +
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQISK 276
Query: 296 GHIDFTSDP-----WPSISPQ-AKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
H DP +P I + +D++K L DPKQR++ E+LAHP+++
Sbjct: 277 LHA--IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 137/291 (47%), Gaps = 54/291 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFAC----KTIAKRKLVNKED-----IEDVRREVQ 131
YS K++G G G+ + F K I K VN E+ ++ R E+
Sbjct: 58 YSILKQIGSG-----------GSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 106
Query: 132 IMHHLTGQPN-IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ L + I+ L Q +++VME C +L + K S + ++
Sbjct: 107 YLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNML 165
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK--QGEVFKDI-VGSAY 247
+ +HT H G++H DLKP NFL++ + LK DFG++ + V KD VG+
Sbjct: 166 EAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 221
Query: 248 YIAPEVLK-----RKYG-------PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR 295
Y+ PE +K R+ G P++D+WS+G +LY + G PF I N I +
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQISK 276
Query: 296 GHIDFTSDP-----WPSISPQ-AKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
H DP +P I + +D++K L DPKQR++ E+LAHP+++
Sbjct: 277 LHAII--DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 137/291 (47%), Gaps = 54/291 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFAC----KTIAKRKLVNKED-----IEDVRREVQ 131
YS K++G G G+ + F K I K VN E+ ++ R E+
Sbjct: 58 YSILKQIGSG-----------GSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 106
Query: 132 IMHHLTGQPN-IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ L + I+ L Q +++VME C +L + K S + ++
Sbjct: 107 YLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNML 165
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK--QGEVFKDI-VGSAY 247
+ +HT H G++H DLKP NFL++ + LK DFG++ + V KD VG+
Sbjct: 166 EAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVN 221
Query: 248 YIAPEVLK-----RKYG-------PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR 295
Y+ PE +K R+ G P++D+WS+G +LY + G PF I N I +
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQISK 276
Query: 296 GHIDFTSDP-----WPSISPQ-AKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
H DP +P I + +D++K L DPKQR++ E+LAHP+++
Sbjct: 277 LHAII--DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 137/291 (47%), Gaps = 54/291 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFAC----KTIAKRKLVNKED-----IEDVRREVQ 131
YS K++G G G+ + F K I K VN E+ ++ R E+
Sbjct: 30 YSILKQIGSG-----------GSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 78
Query: 132 IMHHLTGQPN-IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ L + I+ L Q +++VME C +L + K S + ++
Sbjct: 79 YLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNML 137
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK--QGEVFKDI-VGSAY 247
+ +HT H G++H DLKP NFL++ + LK DFG++ + V KD VG+
Sbjct: 138 EAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 193
Query: 248 YIAPEVLK-----RKYG-------PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR 295
Y+ PE +K R+ G P++D+WS+G +LY + G PF I N I +
Sbjct: 194 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQISK 248
Query: 296 GHIDFTSDP-----WPSISPQ-AKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
H DP +P I + +D++K L DPKQR++ E+LAHP+++
Sbjct: 249 LHA--IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 12/262 (4%)
Query: 79 ATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
A + K++GRGQF + G A K + L++ + D +E+ ++ L
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN- 90
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRII-----AKGHYTERAAASLLRTIVQII 193
PN+++ ++ + +++V+EL G+L R+I K ER + +
Sbjct: 91 HPNVIKYYASFIEDNELNIVLELADAGDL-SRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 194 HTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK-QGEVFKDIVGSAYYIAPE 252
HS V+HRD+KP N + +K D GL F+ + +VG+ YY++PE
Sbjct: 150 EHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE 206
Query: 253 -VLKRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQ 311
+ + Y ++DIWS+G +LY + PF+ + + D+ P S +
Sbjct: 207 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEE 266
Query: 312 AKDLVKKMLNSDPKQRLTATEV 333
+ LV +N DP++R T V
Sbjct: 267 LRQLVNMCINPDPEKRPDVTYV 288
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 137/291 (47%), Gaps = 54/291 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFAC----KTIAKRKLVNKED-----IEDVRREVQ 131
YS K++G G G+ + F K I K VN E+ ++ R E+
Sbjct: 11 YSILKQIGSG-----------GSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 59
Query: 132 IMHHLTGQPN-IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ L + I+ L Q +++VME C +L + K S + ++
Sbjct: 60 YLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNML 118
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK--QGEVFKDI-VGSAY 247
+ +HT H G++H DLKP NFL++ + LK DFG++ + V KD VG+
Sbjct: 119 EAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 174
Query: 248 YIAPEVLK-----RKYG-------PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR 295
Y+ PE +K R+ G P++D+WS+G +LY + G PF I N I +
Sbjct: 175 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQISK 229
Query: 296 GHIDFTSDP-----WPSISPQ-AKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
H DP +P I + +D++K L DPKQR++ E+LAHP+++
Sbjct: 230 LHAII--DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 137/291 (47%), Gaps = 54/291 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFAC----KTIAKRKLVNKED-----IEDVRREVQ 131
YS K++G G G+ + F K I K VN E+ ++ R E+
Sbjct: 30 YSILKQIGSG-----------GSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 78
Query: 132 IMHHLTGQPN-IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ L + I+ L Q +++VME C +L + K S + ++
Sbjct: 79 YLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNML 137
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK--QGEVFKDI-VGSAY 247
+ +HT H G++H DLKP NFL++ + LK DFG++ + V KD VG+
Sbjct: 138 EAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDXXXVVKDSQVGTVN 193
Query: 248 YIAPEVLK-----RKYG-------PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR 295
Y+ PE +K R+ G P++D+WS+G +LY + G PF I N I +
Sbjct: 194 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQISK 248
Query: 296 GHIDFTSDP-----WPSISPQ-AKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
H DP +P I + +D++K L DPKQR++ E+LAHP+++
Sbjct: 249 LHA--IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 131/288 (45%), Gaps = 34/288 (11%)
Query: 74 MEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM 133
+ D + + +G G +G + H TGQ A K + V ++ E++++E+ ++
Sbjct: 19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINML 74
Query: 134 HHLTGQPNIVELKGAYEDKQ------SVHLVMELCAGGELFDRII-AKGH-YTERAAASL 185
+ NI GA+ K + LVME C G + D I KG+ E A +
Sbjct: 75 KKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYI 134
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKD-IVG 244
R I++ + H VIHRD+K +N LL EN+ +K DFG+S + ++ +G
Sbjct: 135 CREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQLDRTVGRRNTFIG 191
Query: 245 SAYYIAPEVLKRKYGPEA------DIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHI 298
+ Y++APEV+ P+A D+WS+G+ + G PP +R
Sbjct: 192 TPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP-------MRALF 244
Query: 299 DFTSDPWPSI-----SPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+P P + S + + ++ L + QR +++ HP+I++
Sbjct: 245 LIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 137/320 (42%), Gaps = 56/320 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
RP E +Y+ K +G G FG+ + +G+ A K + + K RE+Q
Sbjct: 21 RPQE---VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQ 70
Query: 132 IMHHLTGQPNIVELKGAY----EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
IM L NIV L+ + E K V+L + L E R+ HY+ RA +L
Sbjct: 71 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPV 126
Query: 188 TIVQI--------IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF 239
V++ + HS G+ HRD+KP+N LL + + LK DFG + +GE
Sbjct: 127 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPN 184
Query: 240 KDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-- 295
+ S YY APE++ Y D+WS G +L LL G P F +S I++
Sbjct: 185 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 244
Query: 296 -------------GHIDF-----TSDPW-----PSISPQAKDLVKKMLNSDPKQRLTATE 332
+ +F + PW P P+A L ++L P RLT E
Sbjct: 245 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 304
Query: 333 VLAHPWIKEDGEAPDVPLDN 352
AH + E + P+V L N
Sbjct: 305 ACAHSFFDELRD-PNVKLPN 323
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
RP E +Y+ K +G G FG+ + +G+ A K + + K RE+Q
Sbjct: 50 RPQE---VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQ 99
Query: 132 IMHHLTGQPNIVELKGAY----EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
IM L NIV L+ + E K V+L + L E R+ HY+ RA +L
Sbjct: 100 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPV 155
Query: 188 TIVQI--------IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF 239
V++ + HS G+ HRD+KP+N LLL+ D + LK DFG + +GE
Sbjct: 156 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQN-LLLDPD-TAVLKLCDFGSAKQLVRGEPN 213
Query: 240 KDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-- 295
+ S YY APE++ Y D+WS G +L LL G P F +S I++
Sbjct: 214 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 273
Query: 296 -------------GHIDF-----TSDPW-----PSISPQAKDLVKKMLNSDPKQRLTATE 332
+ +F + PW P P+A L ++L P RLT E
Sbjct: 274 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 333
Query: 333 VLAHPWIKEDGEAPDVPLDN 352
AH + E + P+V L N
Sbjct: 334 ACAHSFFDELRD-PNVKLPN 352
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
RP E +Y+ K +G G FG+ + +G+ A K + + K RE+Q
Sbjct: 44 RPQE---VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQ 93
Query: 132 IMHHLTGQPNIVELKGAY----EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
IM L NIV L+ + E K V+L + L E R+ HY+ RA +L
Sbjct: 94 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPV 149
Query: 188 TIVQI--------IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF 239
V++ + HS G+ HRD+KP+N LLL+ D + LK DFG + +GE
Sbjct: 150 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQN-LLLDPD-TAVLKLCDFGSAKQLVRGEPN 207
Query: 240 KDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-- 295
+ S YY APE++ Y D+WS G +L LL G P F +S I++
Sbjct: 208 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 267
Query: 296 -------------GHIDF-----TSDPW-----PSISPQAKDLVKKMLNSDPKQRLTATE 332
+ +F + PW P P+A L ++L P RLT E
Sbjct: 268 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 327
Query: 333 VLAHPWIKEDGEAPDVPLDN 352
AH + E + P+V L N
Sbjct: 328 ACAHSFFDELRD-PNVKLPN 346
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 115/236 (48%), Gaps = 19/236 (8%)
Query: 125 DVRREVQIMHHLTGQPNIVELKGAY--EDKQSVHLVMELCAGG--ELFDRIIAKGHYTER 180
+V++E+Q++ L + N+++L E+KQ +++VME C G E+ D + K +
Sbjct: 52 NVKKEIQLLRRLRHK-NVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK-RFPVC 109
Query: 181 AAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF---YKQGE 237
A ++ + HS G++H+D+KP N LL LK + G++ + +
Sbjct: 110 QAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTT---GGTLKISALGVAEALHPFAADD 166
Query: 238 VFKDIVGSAYYIAPEV---LKRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL 294
+ GS + PE+ L G + DIWS GV LY + G+ PF ++ + +F I
Sbjct: 167 TCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIG 226
Query: 295 RGHIDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPL 350
+G D P +S DL+K ML +P +R + ++ H W ++ + P+
Sbjct: 227 KGSYAIPGDCGPPLS----DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPV 278
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 135/293 (46%), Gaps = 58/293 (19%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFAC----KTIAKRKLVNKED-----IEDVRREVQ 131
YS K++G G G+ + F K I K VN E+ ++ R E+
Sbjct: 14 YSILKQIGSG-----------GSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 62
Query: 132 IMHHLTGQPN-IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ L + I+ L Q +++VME C +L + K S + ++
Sbjct: 63 YLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNML 121
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK--QGEVFKDI-VGSAY 247
+ +HT H G++H DLKP NFL++ + LK DFG++ + V KD VG+
Sbjct: 122 EAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 177
Query: 248 YIAPEVLK-----RKYG-------PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR 295
Y+ PE +K R+ G P++D+WS+G +LY + G PF I N I +
Sbjct: 178 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQISK 232
Query: 296 GH--------IDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
H I+F P +D++K L DPKQR++ E+LAHP+++
Sbjct: 233 LHAIIDPNHEIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
RP E +Y+ K +G G FG+ + +G+ A K + + K RE+Q
Sbjct: 50 RPQE---VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQ 99
Query: 132 IMHHLTGQPNIVELKGAY----EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
IM L NIV L+ + E K V+L + L E R+ HY+ RA +L
Sbjct: 100 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPV 155
Query: 188 TIVQI--------IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF 239
V++ + HS G+ HRD+KP+N LLL+ D + LK DFG + +GE
Sbjct: 156 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQN-LLLDPD-TAVLKLCDFGSAKQLVRGEPN 213
Query: 240 KDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-- 295
+ S YY APE++ Y D+WS G +L LL G P F +S I++
Sbjct: 214 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 273
Query: 296 -------------GHIDF-----TSDPW-----PSISPQAKDLVKKMLNSDPKQRLTATE 332
+ +F + PW P P+A L ++L P RLT E
Sbjct: 274 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 333
Query: 333 VLAHPWIKEDGEAPDVPLDN 352
AH + E + P+V L N
Sbjct: 334 ACAHSFFDELRD-PNVKLPN 352
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
RP E +Y+ K +G G FG+ + +G+ A K + + K RE+Q
Sbjct: 28 RPQE---VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQ 77
Query: 132 IMHHLTGQPNIVELKGAY----EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
IM L NIV L+ + E K V+L + L E R+ HY+ RA +L
Sbjct: 78 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPV 133
Query: 188 TIVQI--------IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF 239
V++ + HS G+ HRD+KP+N LLL+ D + LK DFG + +GE
Sbjct: 134 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQN-LLLDPD-TAVLKLCDFGSAKQLVRGEPN 191
Query: 240 KDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-- 295
+ S YY APE++ Y D+WS G +L LL G P F +S I++
Sbjct: 192 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 251
Query: 296 -------------GHIDF-----TSDPW-----PSISPQAKDLVKKMLNSDPKQRLTATE 332
+ +F + PW P P+A L ++L P RLT E
Sbjct: 252 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 311
Query: 333 VLAHPWIKEDGEAPDVPLDN 352
AH + E + P+V L N
Sbjct: 312 ACAHSFFDELRD-PNVKLPN 330
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 137/291 (47%), Gaps = 54/291 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFAC----KTIAKRKLVNKED-----IEDVRREVQ 131
YS K++G G G+ + F K I K VN E+ ++ R E+
Sbjct: 10 YSILKQIGSG-----------GSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 58
Query: 132 IMHHLTGQPN-IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ L + I+ L Q +++VME C +L + K S + ++
Sbjct: 59 YLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNML 117
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK--QGEVFKDI-VGSAY 247
+ +HT H G++H DLKP NFL++ + LK DFG++ + V KD VG+
Sbjct: 118 EAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 173
Query: 248 YIAPEVLK-----RKYG-------PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR 295
Y+ PE +K R+ G P++D+WS+G +LY + G PF I N I +
Sbjct: 174 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQISK 228
Query: 296 GHIDFTSDP-----WPSISPQ-AKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
H DP +P I + +D++K L DPKQR++ E+LAHP+++
Sbjct: 229 LHA--IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
RP E +Y+ K +G G FG+ + +G+ A K + + K RE+Q
Sbjct: 35 RPQE---VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQ 84
Query: 132 IMHHLTGQPNIVELKGAY----EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
IM L NIV L+ + E K V+L + L E R+ HY+ RA +L
Sbjct: 85 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPV 140
Query: 188 TIVQI--------IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF 239
V++ + HS G+ HRD+KP+N LLL+ D + LK DFG + +GE
Sbjct: 141 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQN-LLLDPD-TAVLKLCDFGSAKQLVRGEPN 198
Query: 240 KDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-- 295
+ S YY APE++ Y D+WS G +L LL G P F +S I++
Sbjct: 199 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 258
Query: 296 -------------GHIDF-----TSDPW-----PSISPQAKDLVKKMLNSDPKQRLTATE 332
+ +F + PW P P+A L ++L P RLT E
Sbjct: 259 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 318
Query: 333 VLAHPWIKEDGEAPDVPLDN 352
AH + E + P+V L N
Sbjct: 319 ACAHSFFDELRD-PNVKLPN 337
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
RP E +Y+ K +G G FG+ + +G+ A K + + K RE+Q
Sbjct: 16 RPQE---VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-------RELQ 65
Query: 132 IMHHLTGQPNIVELKGAY----EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
IM L NIV L+ + E K V+L + L E R+ HY+ RA +L
Sbjct: 66 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPV 121
Query: 188 TIVQI--------IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF 239
V++ + HS G+ HRD+KP+N LLL+ D + LK DFG + +GE
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQN-LLLDPD-TAVLKLCDFGSAKQLVRGEPN 179
Query: 240 KDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-- 295
+ S YY APE++ Y D+WS G +L LL G P F +S I++
Sbjct: 180 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 239
Query: 296 -------------GHIDFT-----SDPW-----PSISPQAKDLVKKMLNSDPKQRLTATE 332
+ +F + PW P P+A L ++L P RLT E
Sbjct: 240 GTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 299
Query: 333 VLAHPWIKEDGEAPDVPLDN 352
AH + E + P+V L N
Sbjct: 300 ACAHSFFDELRD-PNVKLPN 318
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 137/320 (42%), Gaps = 56/320 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
RP E +Y+ K +G G FG+ + +G+ A K + + K RE+Q
Sbjct: 24 RPQE---VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQ 73
Query: 132 IMHHLTGQPNIVELKGAY----EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
IM L NIV L+ + E K V+L + L E R+ HY+ RA +L
Sbjct: 74 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPV 129
Query: 188 TIVQI--------IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF 239
V++ + HS G+ HRD+KP+N LL + + LK DFG + +GE
Sbjct: 130 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPN 187
Query: 240 KDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-- 295
+ S YY APE++ Y D+WS G +L LL G P F +S I++
Sbjct: 188 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 247
Query: 296 -------------GHIDF-----TSDPW-----PSISPQAKDLVKKMLNSDPKQRLTATE 332
+ +F + PW P P+A L ++L P RLT E
Sbjct: 248 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 307
Query: 333 VLAHPWIKEDGEAPDVPLDN 352
AH + E + P+V L N
Sbjct: 308 ACAHSFFDELRD-PNVKLPN 326
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
RP E +Y+ K +G G FG+ + +G+ A K + + K RE+Q
Sbjct: 28 RPQE---VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQ 77
Query: 132 IMHHLTGQPNIVELKGAY----EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
IM L NIV L+ + E K V+L + L E R+ HY+ RA +L
Sbjct: 78 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPV 133
Query: 188 TIVQI--------IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF 239
V++ + HS G+ HRD+KP+N LLL+ D + LK DFG + +GE
Sbjct: 134 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQN-LLLDPD-TAVLKLCDFGSAKQLVRGEPN 191
Query: 240 KDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-- 295
+ S YY APE++ Y D+WS G +L LL G P F +S I++
Sbjct: 192 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 251
Query: 296 -------------GHIDF-----TSDPW-----PSISPQAKDLVKKMLNSDPKQRLTATE 332
+ +F + PW P P+A L ++L P RLT E
Sbjct: 252 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 311
Query: 333 VLAHPWIKEDGEAPDVPLDN 352
AH + E + P+V L N
Sbjct: 312 ACAHSFFDELRD-PNVKLPN 330
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
RP E +Y+ K +G G FG+ + +G+ A K + + K RE+Q
Sbjct: 29 RPQE---VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQ 78
Query: 132 IMHHLTGQPNIVELKGAY----EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
IM L NIV L+ + E K V+L + L E R+ HY+ RA +L
Sbjct: 79 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPV 134
Query: 188 TIVQI--------IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF 239
V++ + HS G+ HRD+KP+N LLL+ D + LK DFG + +GE
Sbjct: 135 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQN-LLLDPD-TAVLKLCDFGSAKQLVRGEPN 192
Query: 240 KDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-- 295
+ S YY APE++ Y D+WS G +L LL G P F +S I++
Sbjct: 193 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 252
Query: 296 -------------GHIDF-----TSDPW-----PSISPQAKDLVKKMLNSDPKQRLTATE 332
+ +F + PW P P+A L ++L P RLT E
Sbjct: 253 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 312
Query: 333 VLAHPWIKEDGEAPDVPLDN 352
AH + E + P+V L N
Sbjct: 313 ACAHSFFDELRD-PNVKLPN 331
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
RP E +Y+ K +G G FG+ + +G+ A K + + K RE+Q
Sbjct: 54 RPQE---VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQ 103
Query: 132 IMHHLTGQPNIVELKGAY----EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
IM L NIV L+ + E K V+L + L E R+ HY+ RA +L
Sbjct: 104 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYS-RAKQTLPV 159
Query: 188 TIVQI--------IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF 239
V++ + HS G+ HRD+KP+N LLL+ D + LK DFG + +GE
Sbjct: 160 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQN-LLLDPD-TAVLKLCDFGSAKQLVRGEPN 217
Query: 240 KDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-- 295
+ S YY APE++ Y D+WS G +L LL G P F +S I++
Sbjct: 218 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 277
Query: 296 -------------GHIDF-----TSDPW-----PSISPQAKDLVKKMLNSDPKQRLTATE 332
+ +F + PW P P+A L ++L P RLT E
Sbjct: 278 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 337
Query: 333 VLAHPWIKEDGEAPDVPLDN 352
AH + E + P+V L N
Sbjct: 338 ACAHSFFDELRD-PNVKLPN 356
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
RP E +Y+ K +G G FG+ + +G+ A K + + K RE+Q
Sbjct: 17 RPQE---VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQ 66
Query: 132 IMHHLTGQPNIVELKGAY----EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
IM L NIV L+ + E K V+L + L E R+ HY+ RA +L
Sbjct: 67 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPV 122
Query: 188 TIVQI--------IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF 239
V++ + HS G+ HRD+KP+N LLL+ D + LK DFG + +GE
Sbjct: 123 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQN-LLLDPD-TAVLKLCDFGSAKQLVRGEPN 180
Query: 240 KDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-- 295
+ S YY APE++ Y D+WS G +L LL G P F +S I++
Sbjct: 181 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 240
Query: 296 -------------GHIDF-----TSDPW-----PSISPQAKDLVKKMLNSDPKQRLTATE 332
+ +F + PW P P+A L ++L P RLT E
Sbjct: 241 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 300
Query: 333 VLAHPWIKEDGEAPDVPLDN 352
AH + E + P+V L N
Sbjct: 301 ACAHSFFDELRD-PNVKLPN 319
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
RP E +Y+ K +G G FG+ + +G+ A K + + K RE+Q
Sbjct: 52 RPQE---VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQ 101
Query: 132 IMHHLTGQPNIVELKGAY----EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
IM L NIV L+ + E K V+L + L E R+ HY+ RA +L
Sbjct: 102 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPV 157
Query: 188 TIVQI--------IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF 239
V++ + HS G+ HRD+KP+N LLL+ D + LK DFG + +GE
Sbjct: 158 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQN-LLLDPD-TAVLKLCDFGSAKQLVRGEPN 215
Query: 240 KDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-- 295
+ S YY APE++ Y D+WS G +L LL G P F +S I++
Sbjct: 216 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 275
Query: 296 -------------GHIDF-----TSDPW-----PSISPQAKDLVKKMLNSDPKQRLTATE 332
+ +F + PW P P+A L ++L P RLT E
Sbjct: 276 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 335
Query: 333 VLAHPWIKEDGEAPDVPLDN 352
AH + E + P+V L N
Sbjct: 336 ACAHSFFDELRD-PNVKLPN 354
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
RP E +Y+ K +G G FG+ + +G+ A K + + K RE+Q
Sbjct: 95 RPQE---VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQ 144
Query: 132 IMHHLTGQPNIVELKGAY----EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
IM L NIV L+ + E K V+L + L E R+ HY+ RA +L
Sbjct: 145 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--HYS-RAKQTLPV 200
Query: 188 TIVQI--------IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF 239
V++ + HS G+ HRD+KP+N LLL+ D + LK DFG + +GE
Sbjct: 201 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQN-LLLDPD-TAVLKLCDFGSAKQLVRGEPN 258
Query: 240 KDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-- 295
+ S YY APE++ Y D+WS G +L LL G P F +S I++
Sbjct: 259 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 318
Query: 296 -------------GHIDF-----TSDPW-----PSISPQAKDLVKKMLNSDPKQRLTATE 332
+ +F + PW P P+A L ++L P RLT E
Sbjct: 319 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 378
Query: 333 VLAHPWIKEDGEAPDVPLDN 352
AH + E + P+V L N
Sbjct: 379 ACAHSFFDELRD-PNVKLPN 397
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
RP E +Y+ K +G G FG+ + +G+ A K + + K RE+Q
Sbjct: 16 RPQE---VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQ 65
Query: 132 IMHHLTGQPNIVELKGAY----EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
IM L NIV L+ + E K V+L + L E R+ HY+ RA +L
Sbjct: 66 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPV 121
Query: 188 TIVQI--------IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF 239
V++ + HS G+ HRD+KP+N LLL+ D + LK DFG + +GE
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQN-LLLDPD-TAVLKLCDFGSAKQLVRGEPN 179
Query: 240 KDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-- 295
+ S YY APE++ Y D+WS G +L LL G P F +S I++
Sbjct: 180 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 239
Query: 296 -------------GHIDF-----TSDPW-----PSISPQAKDLVKKMLNSDPKQRLTATE 332
+ +F + PW P P+A L ++L P RLT E
Sbjct: 240 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 299
Query: 333 VLAHPWIKEDGEAPDVPLDN 352
AH + E + P+V L N
Sbjct: 300 ACAHSFFDELRD-PNVKLPN 318
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
RP E +Y+ K +G G FG+ + +G+ A K + + K RE+Q
Sbjct: 16 RPQE---VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQ 65
Query: 132 IMHHLTGQPNIVELKGAY----EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
IM L NIV L+ + E K V+L + L E R+ HY+ RA +L
Sbjct: 66 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPV 121
Query: 188 TIVQI--------IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF 239
V++ + HS G+ HRD+KP+N LLL+ D + LK DFG + +GE
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQN-LLLDPD-TAVLKLCDFGSAKQLVRGEPN 179
Query: 240 KDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-- 295
+ S YY APE++ Y D+WS G +L LL G P F +S I++
Sbjct: 180 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 239
Query: 296 -------------GHIDF-----TSDPW-----PSISPQAKDLVKKMLNSDPKQRLTATE 332
+ +F + PW P P+A L ++L P RLT E
Sbjct: 240 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 299
Query: 333 VLAHPWIKEDGEAPDVPLDN 352
AH + E + P+V L N
Sbjct: 300 ACAHSFFDELRD-PNVKLPN 318
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
RP E +Y+ K +G G FG+ + +G+ A K + + K RE+Q
Sbjct: 16 RPQE---VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQ 65
Query: 132 IMHHLTGQPNIVELKGAY----EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
IM L NIV L+ + E K V+L + L E R+ HY+ RA +L
Sbjct: 66 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPV 121
Query: 188 TIVQI--------IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF 239
V++ + HS G+ HRD+KP+N LLL+ D + LK DFG + +GE
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQN-LLLDPD-TAVLKLCDFGSAKQLVRGEPN 179
Query: 240 KDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-- 295
+ S YY APE++ Y D+WS G +L LL G P F +S I++
Sbjct: 180 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 239
Query: 296 -------------GHIDF-----TSDPW-----PSISPQAKDLVKKMLNSDPKQRLTATE 332
+ +F + PW P P+A L ++L P RLT E
Sbjct: 240 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 299
Query: 333 VLAHPWIKEDGEAPDVPLDN 352
AH + E + P+V L N
Sbjct: 300 ACAHSFFDELRD-PNVKLPN 318
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
RP E +Y+ K +G G FG+ + +G+ A K + + K RE+Q
Sbjct: 20 RPQE---VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQ 69
Query: 132 IMHHLTGQPNIVELKGAY----EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
IM L NIV L+ + E K V+L + L E R+ HY+ RA +L
Sbjct: 70 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPV 125
Query: 188 TIVQI--------IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF 239
V++ + HS G+ HRD+KP+N LLL+ D + LK DFG + +GE
Sbjct: 126 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQN-LLLDPD-TAVLKLCDFGSAKQLVRGEPN 183
Query: 240 KDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-- 295
+ S YY APE++ Y D+WS G +L LL G P F +S I++
Sbjct: 184 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 243
Query: 296 -------------GHIDF-----TSDPW-----PSISPQAKDLVKKMLNSDPKQRLTATE 332
+ +F + PW P P+A L ++L P RLT E
Sbjct: 244 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 303
Query: 333 VLAHPWIKEDGEAPDVPLDN 352
AH + E + P+V L N
Sbjct: 304 ACAHSFFDELRD-PNVKLPN 322
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
RP E +Y+ K +G G FG+ + +G+ A K + + K RE+Q
Sbjct: 16 RPQE---VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQ 65
Query: 132 IMHHLTGQPNIVELKGAY----EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
IM L NIV L+ + E K V+L + L E R+ HY+ RA +L
Sbjct: 66 IMRKL-DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPV 121
Query: 188 TIVQI--------IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF 239
V++ + HS G+ HRD+KP+N LLL+ D + LK DFG + +GE
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQN-LLLDPD-TAVLKLCDFGSAKQLVRGEPN 179
Query: 240 KDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-- 295
+ S YY APE++ Y D+WS G +L LL G P F +S I++
Sbjct: 180 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 239
Query: 296 -------------GHIDF-----TSDPW-----PSISPQAKDLVKKMLNSDPKQRLTATE 332
+ +F + PW P P+A L ++L P RLT E
Sbjct: 240 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 299
Query: 333 VLAHPWIKEDGEAPDVPLDN 352
AH + E + P+V L N
Sbjct: 300 ACAHSFFDELRD-PNVKLPN 318
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
RP E +Y+ K +G G FG+ + +G+ A K + + K RE+Q
Sbjct: 16 RPQE---VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-------RELQ 65
Query: 132 IMHHLTGQPNIVELKGAY----EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
IM L NIV L+ + E K V+L + L E R+ HY+ RA +L
Sbjct: 66 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV--ARHYS-RAKQTLPV 121
Query: 188 TIVQI--------IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF 239
V++ + HS G+ HRD+KP+N LLL+ D + LK DFG + +GE
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQN-LLLDPD-TAVLKLCDFGSAKQLVRGEPN 179
Query: 240 KDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-- 295
+ S YY APE++ Y D+WS G +L LL G P F +S I++
Sbjct: 180 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 239
Query: 296 -------------GHIDF-----TSDPW-----PSISPQAKDLVKKMLNSDPKQRLTATE 332
+ +F + PW P P+A L ++L P RLT E
Sbjct: 240 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 299
Query: 333 VLAHPWIKEDGEAPDVPLDN 352
AH + E + P+V L N
Sbjct: 300 ACAHSFFDELRD-PNVKLPN 318
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 115/255 (45%), Gaps = 8/255 (3%)
Query: 77 VKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHL 136
+ Y +LG G +L + A K I +E ++ REV L
Sbjct: 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL 68
Query: 137 TGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
+ Q NIV + E+ +LVME G L + I + G + A + I+ I
Sbjct: 69 SHQ-NIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHA 127
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKD--IVGSAYYIAPEVL 254
H M ++HRD+KP+N L+ D N LK DFG++ + + + ++G+ Y +PE
Sbjct: 128 HDMRIVHRDIKPQNILI---DSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA 184
Query: 255 KRKYGPE-ADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHI-DFTSDPWPSISPQA 312
K + E DI+SIG++LY +L G PPF E+ I ++ + + T+D I
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSL 244
Query: 313 KDLVKKMLNSDPKQR 327
+++ + D R
Sbjct: 245 SNVILRATEKDKANR 259
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 130/302 (43%), Gaps = 61/302 (20%)
Query: 88 GRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR---REVQIMHHLT--GQPNI 142
G+G FG L K TG A K + I+D R RE+QIM L PNI
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKV----------IQDPRFRNRELQIMQDLAVLHHPNI 81
Query: 143 VELKGAY-----EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAAS------LLRTIVQ 191
V+L+ + D++ ++L + + + R + +Y + A L +++
Sbjct: 82 VQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRC-CRNYYRRQVAPPPILIKVFLFQLIR 140
Query: 192 IIHTCH--SMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYI 249
I H S+ V HRD+KP N L+ + + LK DFG + E + S YY
Sbjct: 141 SIGCLHLPSVNVCHRDIKPHNVLV--NEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYR 198
Query: 250 APEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR------------ 295
APE++ + Y DIWS+G + ++ G P F ++ G + I+R
Sbjct: 199 APELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRK 258
Query: 296 ---GHID---FTSD--PWPSI--------SPQAKDLVKKMLNSDPKQRLTATEVLAHPWI 339
H D + S PW ++ + +A DL+ +L P++R+ E L HP+
Sbjct: 259 LNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF 318
Query: 340 KE 341
E
Sbjct: 319 DE 320
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 132/312 (42%), Gaps = 48/312 (15%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIED-----VRREVQIMHHLTGQPN 141
LG GQF + K T Q A K I KL ++ + +D RE++++ L+ PN
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKI---KLGHRSEAKDGINRTALREIKLLQELS-HPN 73
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGH---YTERAAASLLRTIVQIIHTCHS 198
I+ L A+ K ++ LV + E +I K + T + + +Q + H
Sbjct: 74 IIGLLDAFGHKSNISLVFDFM---ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVL--K 255
++HRDLKP N LL DEN LK DFGL+ F + V + +Y APE+L
Sbjct: 131 HWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGA 187
Query: 256 RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAK-- 313
R YG D+W++G +L LL VP +S+ I T + WP +
Sbjct: 188 RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV 247
Query: 314 ----------------------DLVKKMLNSDPKQRLTATEVLAHPWI-KEDGEAP--DV 348
DL++ + +P R+TAT+ L + G P +
Sbjct: 248 TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQL 307
Query: 349 PLDNAVLSRLKQ 360
P N + LK+
Sbjct: 308 PRPNCPVETLKE 319
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 149/300 (49%), Gaps = 26/300 (8%)
Query: 74 MEDVKA----TYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
M+++KA ++ +++G+G FG T + A K I + ++ ED+++E
Sbjct: 13 MQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI--EDIQQE 70
Query: 130 VQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTI 189
+ ++ P + + G+Y + ++ME GG D ++ G E A++LR I
Sbjct: 71 ITVLSQ-CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREI 128
Query: 190 VQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKD-IVGSAYY 248
++ + HS IHRD+K N LL E+ +K DFG++ ++ ++ VG+ ++
Sbjct: 129 LKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFW 185
Query: 249 IAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPS 307
+APEV+K+ Y +ADIWS+G+ L G PP H + + + ++P P+
Sbjct: 186 MAPEVIKQSAYDSKADIWSLGITAIELARGEPP------HSELHPMKVLFLIPKNNP-PT 238
Query: 308 I----SPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLKQFKA 363
+ S K+ V+ LN +P R TA E+L H +I + A ++ R K++KA
Sbjct: 239 LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN--AKKTSYLTELIDRYKRWKA 296
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 136/320 (42%), Gaps = 56/320 (17%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
RP E +Y+ K +G G FG+ + +G+ A K + + K RE+Q
Sbjct: 16 RPQE---VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-------RELQ 65
Query: 132 IMHHLTGQPNIVELKGAY----EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR 187
IM L NIV L+ + E K V+L + L R+ HY+ RA +L
Sbjct: 66 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRV--ARHYS-RAKQTLPV 121
Query: 188 TIVQI--------IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF 239
V++ + HS G+ HRD+KP+N LL + + LK DFG + +GE
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPN 179
Query: 240 KDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-- 295
+ S YY APE++ Y D+WS G +L LL G P F +S I++
Sbjct: 180 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 239
Query: 296 -------------GHIDFT-----SDPW-----PSISPQAKDLVKKMLNSDPKQRLTATE 332
+ +F + PW P P+A L ++L P RLT E
Sbjct: 240 GTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 299
Query: 333 VLAHPWIKEDGEAPDVPLDN 352
AH + E + P+V L N
Sbjct: 300 ACAHSFFDELRD-PNVKLPN 318
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 141/285 (49%), Gaps = 22/285 (7%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
+++G+G FG T + A K I + ++ ED+++E+ ++ P + +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI--EDIQQEITVLSQ-CDSPYVTK 69
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
G+Y + ++ME GG D ++ G E A++LR I++ + HS IHR
Sbjct: 70 YYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKD-IVGSAYYIAPEVLKRK-YGPEA 262
D+K N LL E+ +K DFG++ ++ ++ VG+ +++APEV+K+ Y +A
Sbjct: 129 DIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKA 185
Query: 263 DIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSI----SPQAKDLVKK 318
DIWS+G+ L G PP H + + + ++P P++ S K+ V+
Sbjct: 186 DIWSLGITAIELARGEPP------HSELHPMKVLFLIPKNNP-PTLEGNYSKPLKEFVEA 238
Query: 319 MLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLKQFKA 363
LN +P R TA E+L H +I + A ++ R K++KA
Sbjct: 239 CLNKEPSFRPTAKELLKHKFILRN--AKKTSYLTELIDRYKRWKA 281
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 141/285 (49%), Gaps = 22/285 (7%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
+++G+G FG T + A K I + ++ ED+++E+ ++ P + +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI--EDIQQEITVLSQ-CDSPYVTK 69
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
G+Y + ++ME GG D ++ G E A++LR I++ + HS IHR
Sbjct: 70 YYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKD-IVGSAYYIAPEVLKRK-YGPEA 262
D+K N LL E+ +K DFG++ ++ ++ VG+ +++APEV+K+ Y +A
Sbjct: 129 DIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKA 185
Query: 263 DIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSI----SPQAKDLVKK 318
DIWS+G+ L G PP H + + + ++P P++ S K+ V+
Sbjct: 186 DIWSLGITAIELARGEPP------HSELHPMKVLFLIPKNNP-PTLEGNYSKPLKEFVEA 238
Query: 319 MLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLKQFKA 363
LN +P R TA E+L H +I + A ++ R K++KA
Sbjct: 239 CLNKEPSFRPTAKELLKHKFILRN--AKKTSYLTELIDRYKRWKA 281
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 121/265 (45%), Gaps = 48/265 (18%)
Query: 133 MHHLTGQPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNI+ L +D ++ LV E + F ++ T+ + I+
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEIL 141
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHSMG++HRD+KP N ++ E+ L+ D+GL+ FY G+ + V S Y+
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 251 PEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-----------GH 297
PE+L + Y D+WS+G ML ++ PF+ H ++ ++R +
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 298 ID---FTSDP-------------WPS---------ISPQAKDLVKKMLNSDPKQRLTATE 332
ID DP W +SP+A D + K+L D + RLTA E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 333 VLAHPWIKEDGEAPDVPL-DNAVLS 356
+ HP+ + P DNAVLS
Sbjct: 318 AMEHPYFYPVVKEQSQPCADNAVLS 342
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 125/282 (44%), Gaps = 16/282 (5%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH 134
+D + +S +E+G G FG + + A K ++ + E +D+ +EV+ +
Sbjct: 50 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 109
Query: 135 HLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
L PN ++ +G Y + + LVME C G + K E A++ +Q +
Sbjct: 110 KLR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLA 168
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVL 254
HS +IHRD+K N LL E +K DFG + F VG+ Y++APEV+
Sbjct: 169 YLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVI 222
Query: 255 ----KRKYGPEADIWSIGVMLYILLCGVPP-FWAESEHGIFNAILRGHIDFTSDPWPSIS 309
+ +Y + D+WS+G+ L PP F + +++ S W S
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---S 279
Query: 310 PQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLD 351
++ V L P+ R T+ +L H ++ + P V +D
Sbjct: 280 EYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE-RPPTVIMD 320
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 18/263 (6%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LG+G +GI + + A K I +R + + + E+ + HL NIV+
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEIALHKHLK-HKNIVQYL 85
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKG---HYTERAAASLLRTIVQIIHTCHSMGVIH 203
G++ + + + ME GG L + +K E+ + I++ + H ++H
Sbjct: 86 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 204 RDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK---RKYG 259
RD+K +N L+ + LK +DFG S + G+ Y+APE++ R YG
Sbjct: 146 RDIKGDNVLI--NTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 203
Query: 260 PEADIWSIGVMLYILLCGVPPFW--AESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVK 317
ADIWS+G + + G PPF+ E + +F G + S+S +AK +
Sbjct: 204 KAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV---GMFKVHPEIPESMSAEAKAFIL 260
Query: 318 KMLNSDPKQRLTATEVLAHPWIK 340
K DP +R A ++L ++K
Sbjct: 261 KCFEPDPDKRACANDLLVDEFLK 283
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 131/261 (50%), Gaps = 20/261 (7%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
+++G+G FG T + A K I + ++ ED+++E+ ++ P + +
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI--EDIQQEITVLSQ-CDSPYVTK 89
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
G+Y + ++ME GG D ++ G E A++LR I++ + HS IHR
Sbjct: 90 YYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHR 148
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKD-IVGSAYYIAPEVLKRK-YGPEA 262
D+K N LL E+ +K DFG++ ++ ++ VG+ +++APEV+K+ Y +A
Sbjct: 149 DIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKA 205
Query: 263 DIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSI----SPQAKDLVKK 318
DIWS+G+ L G PP H + + + ++P P++ S K+ V+
Sbjct: 206 DIWSLGITAIELARGEPP------HSELHPMKVLFLIPKNNP-PTLEGNYSKPLKEFVEA 258
Query: 319 MLNSDPKQRLTATEVLAHPWI 339
LN +P R TA E+L H +I
Sbjct: 259 CLNKEPSFRPTAKELLKHKFI 279
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 125/282 (44%), Gaps = 16/282 (5%)
Query: 75 EDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH 134
+D + +S +E+G G FG + + A K ++ + E +D+ +EV+ +
Sbjct: 11 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 135 HLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
L PN ++ +G Y + + LVME C G + K E A++ +Q +
Sbjct: 71 KLR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLA 129
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVL 254
HS +IHRD+K N LL E +K DFG + F VG+ Y++APEV+
Sbjct: 130 YLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVI 183
Query: 255 ----KRKYGPEADIWSIGVMLYILLCGVPP-FWAESEHGIFNAILRGHIDFTSDPWPSIS 309
+ +Y + D+WS+G+ L PP F + +++ S W S
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---S 240
Query: 310 PQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLD 351
++ V L P+ R T+ +L H ++ + P V +D
Sbjct: 241 EYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE-RPPTVIMD 281
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 126/259 (48%), Gaps = 20/259 (7%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
+G+G FG + T + A K I + ++ ED+++E+ ++ P I
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEI--EDIQQEITVLSQ-CDSPYITRYF 83
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRDL 206
G+Y + ++ME GG D ++ G E A++LR I++ + HS IHRD+
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERKIHRDI 142
Query: 207 KPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKD-IVGSAYYIAPEVLKRK-YGPEADI 264
K N LL E +K DFG++ ++ ++ VG+ +++APEV+K+ Y +ADI
Sbjct: 143 KAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADI 199
Query: 265 WSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQ----AKDLVKKML 320
WS+G+ L G PP H +R + P++ Q K+ V+ L
Sbjct: 200 WSLGITAIELAKGEPP--NSDLHP-----MRVLFLIPKNSPPTLEGQHSKPFKEFVEACL 252
Query: 321 NSDPKQRLTATEVLAHPWI 339
N DP+ R TA E+L H +I
Sbjct: 253 NKDPRFRPTAKELLKHKFI 271
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 18/263 (6%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LG+G +GI + + A K I +R + + + E+ + HL NIV+
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEIALHKHLK-HKNIVQYL 71
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKG---HYTERAAASLLRTIVQIIHTCHSMGVIH 203
G++ + + + ME GG L + +K E+ + I++ + H ++H
Sbjct: 72 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 131
Query: 204 RDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK---RKYG 259
RD+K +N L+ + LK +DFG S + G+ Y+APE++ R YG
Sbjct: 132 RDIKGDNVLI--NTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 189
Query: 260 PEADIWSIGVMLYILLCGVPPFW--AESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVK 317
ADIWS+G + + G PPF+ E + +F G + S+S +AK +
Sbjct: 190 KAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV---GMFKVHPEIPESMSAEAKAFIL 246
Query: 318 KMLNSDPKQRLTATEVLAHPWIK 340
K DP +R A ++L ++K
Sbjct: 247 KCFEPDPDKRACANDLLVDEFLK 269
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 121/273 (44%), Gaps = 31/273 (11%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
E+GRG +G + HK +GQ A K I R V++++ + + ++ ++ + P IV+
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRI--RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYT-------ERAAASLLRTIVQIIHTCHS 198
GA + + MEL + FD+ + E L T+ + H +
Sbjct: 87 YGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDI-----VGSAYYIAPEV 253
+ +IHRD+KP N LL D + +K DFG+S G++ I G Y+APE
Sbjct: 145 LKIIHRDIKPSNILL---DRSGNIKLCDFGIS-----GQLVDSIAKTRDAGCRPYMAPER 196
Query: 254 L-----KRKYGPEADIWSIGVMLYILLCGVPPF--WAESEHGIFNAILRGHIDFTSDPWP 306
+ ++ Y +D+WS+G+ LY L G P+ W + + ++
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEER 256
Query: 307 SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWI 339
SP + V L D +R E+L HP+I
Sbjct: 257 EFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 136/282 (48%), Gaps = 36/282 (12%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR----REVQIMHHLTGQPN 141
ELG G G+ +HK +G A RKL++ E +R RE+Q++H P
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMA------RKLIHLEIKPAIRNQIIRELQVLHE-CNSPY 65
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAAASLLRTIVQ-IIHTCHSM 199
IV GA+ + + ME GG L D+++ K G E+ + +++ + +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDI----VGSAYYIAPEVLK 255
++HRD+KP N L+ ++ E +K DFG+S G++ + VG+ Y++PE L+
Sbjct: 125 KIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQ 176
Query: 256 -RKYGPEADIWSIGVMLYILLCG---VPPFWAESEHGIFNAILRGHIDFTSDPWPSI--- 308
Y ++DIWS+G+ L + G +PP A+ + AI ++P P +
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSG 236
Query: 309 --SPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE-DGEAPD 347
S + +D V K L +P +R +++ H +IK D E D
Sbjct: 237 VFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVD 278
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 30/276 (10%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR----REVQIMHHLTGQPN 141
ELG G G+ +HK +G + RKL++ E +R RE+Q++H P
Sbjct: 32 ELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVLHECN-SPY 84
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAAASLLRTIVQ-IIHTCHSM 199
IV GA+ + + ME GG L D+++ K G E+ + +++ + +
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 143
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDI----VGSAYYIAPEVLK 255
++HRD+KP N L+ ++ E +K DFG+S G++ + VG+ Y++PE L+
Sbjct: 144 KIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQ 195
Query: 256 -RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPS--ISPQA 312
Y ++DIWS+G+ L + G P + S +L ++ PS S +
Sbjct: 196 GTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEF 255
Query: 313 KDLVKKMLNSDPKQRLTATEVLAHPWIKE-DGEAPD 347
+D V K L +P +R +++ H +IK D E D
Sbjct: 256 QDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVD 291
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 66
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 67 KLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKPEN L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 127 HRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 68
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 69 KLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKPEN L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 129 HRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 130/276 (47%), Gaps = 34/276 (12%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR----REVQIMHHLTGQPN 141
ELG G G+ +HK +G + RKL++ E +R RE+Q++H P
Sbjct: 16 ELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVLHECN-SPY 68
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAAASLLRTIVQ-IIHTCHSM 199
IV GA+ + + ME GG L D+++ K G E+ + +++ + +
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 127
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKY 258
++HRD+KP N L+ ++ E +K DFG+S E+ + VG+ Y++PE L+ Y
Sbjct: 128 KIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLID-EMANEFVGTRSYMSPERLQGTHY 183
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQA------ 312
++DIWS+G+ L + G P IF +D+ + P P A
Sbjct: 184 SVQSDIWSMGLSLVEMAVGRYP---RPPMAIFEL-----LDYIVNEPPPKLPSAVFSLEF 235
Query: 313 KDLVKKMLNSDPKQRLTATEVLAHPWIKE-DGEAPD 347
+D V K L +P +R +++ H +IK D E D
Sbjct: 236 QDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVD 271
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 136/286 (47%), Gaps = 24/286 (8%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
+ +G+G FG T Q A K I + ++ ED+++E+ ++ + +
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEI--EDIQQEITVLSQCDSS-YVTK 85
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
G+Y + ++ME GG D ++ G + E A++L+ I++ + HS IHR
Sbjct: 86 YYGSYLKGSKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHR 144
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKD-IVGSAYYIAPEVLKRK-YGPEA 262
D+K N LL E +K DFG++ ++ ++ VG+ +++APEV+++ Y +A
Sbjct: 145 DIKAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKA 201
Query: 263 DIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHI-----DFTSDPWPSISPQAKDLVK 317
DIWS+G+ L G PP + I + + DFT K+ +
Sbjct: 202 DIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTK--------SFKEFID 253
Query: 318 KMLNSDPKQRLTATEVLAHPWIKEDGEAPDVPLDNAVLSRLKQFKA 363
LN DP R TA E+L H +I ++ + + ++ R K++KA
Sbjct: 254 ACLNKDPSFRPTAKELLKHKFIVKNSKKTSYLTE--LIDRFKRWKA 297
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 49/210 (23%)
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYY 248
+++ + CHS G++HRD+KP N ++ + L+ D+GL+ FY + + V S Y+
Sbjct: 141 LLKALDYCHSKGIMHRDVKPHNVMI--DHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYF 198
Query: 249 IAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHG--------------IFNA 292
PE+L + Y D+WS+G ML ++ PF+ ++ ++
Sbjct: 199 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGY 258
Query: 293 ILRGHIDFTSDP-------------WPS---------ISPQAKDLVKKMLNSDPKQRLTA 330
+ + HID DP W + +SP+A DL+ K+L D +QRLTA
Sbjct: 259 LKKYHIDL--DPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTA 316
Query: 331 TEVLAHPW----IKEDGEAPDVPLDNAVLS 356
E + HP+ +KE + DNAVLS
Sbjct: 317 KEAMEHPYFYPVVKEQSQP---SADNAVLS 343
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 21/265 (7%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
ELGRG +G+ H +GQ A K I R VN ++ + + ++ I P V
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVDCPFTVTF 71
Query: 146 KGAYEDKQSVHLVMEL--CAGGELFDRIIAKGH-YTERAAASLLRTIVQIIHTCHS-MGV 201
GA + V + MEL + + + ++I KG E + +IV+ + HS + V
Sbjct: 72 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131
Query: 202 IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDI-VGSAYYIAPEVL-----K 255
IHRD+KP N L+ + +K DFG+S Y +V KDI G Y+APE + +
Sbjct: 132 IHRDVKPSNVLI---NALGQVKMCDFGIS-GYLVDDVAKDIDAGCKPYMAPERINPELNQ 187
Query: 256 RKYGPEADIWSIGVMLYILLCGVPPF--WAESEHGIFNAILRGHIDFTSDPWPSISPQAK 313
+ Y ++DIWS+G+ + L P+ W + + +D + S +
Sbjct: 188 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF---SAEFV 244
Query: 314 DLVKKMLNSDPKQRLTATEVLAHPW 338
D + L + K+R T E++ HP+
Sbjct: 245 DFTSQCLKKNSKERPTYPELMQHPF 269
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 113/247 (45%), Gaps = 47/247 (19%)
Query: 133 MHHLTGQPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNI+ L +D ++ LV E + F ++ T+ + I+
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEIL 141
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHSMG++HRD+KP N L+ E+ L+ D+GL+ FY G+ + V S Y+
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVLI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 251 PEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-----------GH 297
PE+L + Y D+WS+G ML ++ PF+ H ++ ++R +
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 298 ID---FTSDP-------------WPS---------ISPQAKDLVKKMLNSDPKQRLTATE 332
ID DP W +SP+A D + K+L D + RLTA E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 333 VLAHPWI 339
+ HP+
Sbjct: 318 AMEHPYF 324
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 16/224 (7%)
Query: 121 EDIEDVRREVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTER 180
+ IE+VR+E ++ L PNI+ L+G + ++ LVME GG L +R+++
Sbjct: 48 QTIENVRQEAKLFAMLK-HPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPD 105
Query: 181 AAASLLRTIVQIIHTCHS---MGVIHRDLKPENFLLLNKDENSP-----LKATDFGLSVF 232
+ I + ++ H + +IHRDLK N L+L K EN LK TDFGL+
Sbjct: 106 ILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE 165
Query: 233 YKQGEVFKDIVGSAYYIAPEVLKRK-YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFN 291
+ + G+ ++APEV++ + +D+WS GV+L+ LL G PF +
Sbjct: 166 WHRTTKMSA-AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY 224
Query: 292 AILRGHIDFTSDPWPSISPQA-KDLVKKMLNSDPKQRLTATEVL 334
+ + P PS P+ L++ N DP R + T +L
Sbjct: 225 GVAMNKLAL---PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNIL 265
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 66
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKPEN L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 127 HRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 127/288 (44%), Gaps = 38/288 (13%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 65
Query: 144 ELKGAYEDKQSVHLVMELCAGG--ELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGV 201
+L + ++LV E + D G S L ++Q + CHS V
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKDFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 202 IHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKY 258
+HRDLKPEN L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 125 LHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------ 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 305 --W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 67
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 68 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 127
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKPEN L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 128 HRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 245 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 128/288 (44%), Gaps = 38/288 (13%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 67
Query: 144 ELKGAYEDKQSVHLVMELCAGG--ELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGV 201
+L + ++LV E + + D G S L ++Q + CHS V
Sbjct: 68 KLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 202 IHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKY 258
+HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 127 LHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------ 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 243
Query: 305 --W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 244 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 113/247 (45%), Gaps = 47/247 (19%)
Query: 133 MHHLTGQPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNI+ L +D ++ LV E + F ++ T+ + I+
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEIL 141
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHSMG++HRD+KP N ++ E+ L+ D+GL+ FY G+ + V S Y+
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 251 PEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-----------GH 297
PE+L + Y D+WS+G ML ++ PF+ H ++ ++R +
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 298 ID---FTSDP-------------WPS---------ISPQAKDLVKKMLNSDPKQRLTATE 332
ID DP W +SP+A D + K+L D + RLTA E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 333 VLAHPWI 339
+ HP+
Sbjct: 318 AMEHPYF 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 114/247 (46%), Gaps = 47/247 (19%)
Query: 133 MHHLTGQPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNI+ L +D ++ LV E + F ++ + T+ + I+
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQL--RQTLTDYDIRFYMYEIL 141
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHSMG++HRD+KP N ++ E+ L+ D+GL+ FY G+ + V S Y+
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 251 PEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-----------GH 297
PE+L + Y D+WS+G ML ++ PF+ H ++ ++R +
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 298 ID---FTSDP-------------WPS---------ISPQAKDLVKKMLNSDPKQRLTATE 332
ID DP W +SP+A D + K+L D + RLTA E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 333 VLAHPWI 339
+ HP+
Sbjct: 318 AMEHPYF 324
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 128/288 (44%), Gaps = 38/288 (13%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 68
Query: 144 ELKGAYEDKQSVHLVMELCAGG--ELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGV 201
+L + ++LV E + + D G S L ++Q + CHS V
Sbjct: 69 KLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG-IPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 202 IHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKY 258
+HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 128 LHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------ 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 305 --W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 113/247 (45%), Gaps = 47/247 (19%)
Query: 133 MHHLTGQPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNI+ L +D ++ LV E + F ++ T+ + I+
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEIL 141
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHSMG++HRD+KP N ++ E+ L+ D+GL+ FY G+ + V S Y+
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 251 PEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-----------GH 297
PE+L + Y D+WS+G ML ++ PF+ H ++ ++R +
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 298 ID---FTSDP-------------WPS---------ISPQAKDLVKKMLNSDPKQRLTATE 332
ID DP W +SP+A D + K+L D + RLTA E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 333 VLAHPWI 339
+ HP+
Sbjct: 318 AMEHPYF 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 113/247 (45%), Gaps = 47/247 (19%)
Query: 133 MHHLTGQPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNI+ L +D ++ LV E + F ++ T+ + I+
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEIL 141
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHSMG++HRD+KP N ++ E+ L+ D+GL+ FY G+ + V S Y+
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 251 PEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-----------GH 297
PE+L + Y D+WS+G ML ++ PF+ H ++ ++R +
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 298 ID---FTSDP-------------WPS---------ISPQAKDLVKKMLNSDPKQRLTATE 332
ID DP W +SP+A D + K+L D + RLTA E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 333 VLAHPWI 339
+ HP+
Sbjct: 318 AMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 113/247 (45%), Gaps = 47/247 (19%)
Query: 133 MHHLTGQPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNI+ L +D ++ LV E + F ++ T+ + I+
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEIL 141
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHSMG++HRD+KP N ++ E+ L+ D+GL+ FY G+ + V S Y+
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 251 PEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-----------GH 297
PE+L + Y D+WS+G ML ++ PF+ H ++ ++R +
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 298 ID---FTSDP-------------WPS---------ISPQAKDLVKKMLNSDPKQRLTATE 332
ID DP W +SP+A D + K+L D + RLTA E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 333 VLAHPWI 339
+ HP+
Sbjct: 318 AMEHPYF 324
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 65
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVL--KRKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 126 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYS 182
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 113/247 (45%), Gaps = 47/247 (19%)
Query: 133 MHHLTGQPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNI+ L +D ++ LV E + F ++ T+ + I+
Sbjct: 84 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEIL 140
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHSMG++HRD+KP N ++ E+ L+ D+GL+ FY G+ + V S Y+
Sbjct: 141 KALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 198
Query: 251 PEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-----------GH 297
PE+L + Y D+WS+G ML ++ PF+ H ++ ++R +
Sbjct: 199 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKVLGTEDLYDY 256
Query: 298 ID---FTSDP-------------WPS---------ISPQAKDLVKKMLNSDPKQRLTATE 332
ID DP W +SP+A D + K+L D + RLTA E
Sbjct: 257 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 316
Query: 333 VLAHPWI 339
+ HP+
Sbjct: 317 AMEHPYF 323
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 113/247 (45%), Gaps = 47/247 (19%)
Query: 133 MHHLTGQPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNI+ L +D ++ LV E + F ++ T+ + I+
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEIL 141
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHSMG++HRD+KP N ++ E+ L+ D+GL+ FY G+ + V S Y+
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 251 PEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-----------GH 297
PE+L + Y D+WS+G ML ++ PF+ H ++ ++R +
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 298 ID---FTSDP-------------WPS---------ISPQAKDLVKKMLNSDPKQRLTATE 332
ID DP W +SP+A D + K+L D + RLTA E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 333 VLAHPWI 339
+ HP+
Sbjct: 318 AMEHPYF 324
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 113/247 (45%), Gaps = 47/247 (19%)
Query: 133 MHHLTGQPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNI+ L +D ++ LV E + F ++ T+ + I+
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEIL 141
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHSMG++HRD+KP N ++ E+ L+ D+GL+ FY G+ + V S Y+
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 251 PEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-----------GH 297
PE+L + Y D+WS+G ML ++ PF+ H ++ ++R +
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 298 ID---FTSDP-------------WPS---------ISPQAKDLVKKMLNSDPKQRLTATE 332
ID DP W +SP+A D + K+L D + RLTA E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 333 VLAHPWI 339
+ HP+
Sbjct: 318 AMEHPYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 113/247 (45%), Gaps = 47/247 (19%)
Query: 133 MHHLTGQPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNI+ L +D ++ LV E + F ++ T+ + I+
Sbjct: 90 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEIL 146
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHSMG++HRD+KP N ++ E+ L+ D+GL+ FY G+ + V S Y+
Sbjct: 147 KALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 204
Query: 251 PEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-----------GH 297
PE+L + Y D+WS+G ML ++ PF+ H ++ ++R +
Sbjct: 205 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKVLGTEDLYDY 262
Query: 298 ID---FTSDP-------------WPS---------ISPQAKDLVKKMLNSDPKQRLTATE 332
ID DP W +SP+A D + K+L D + RLTA E
Sbjct: 263 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 322
Query: 333 VLAHPWI 339
+ HP+
Sbjct: 323 AMEHPYF 329
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 113/247 (45%), Gaps = 47/247 (19%)
Query: 133 MHHLTGQPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNI+ L +D ++ LV E + F ++ T+ + I+
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEIL 141
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHSMG++HRD+KP N ++ E+ L+ D+GL+ FY G+ + V S Y+
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 251 PEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-----------GH 297
PE+L + Y D+WS+G ML ++ PF+ H ++ ++R +
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 298 ID---FTSDP-------------WPS---------ISPQAKDLVKKMLNSDPKQRLTATE 332
ID DP W +SP+A D + K+L D + RLTA E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 333 VLAHPWI 339
+ HP+
Sbjct: 318 AMEHPYF 324
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 135/304 (44%), Gaps = 42/304 (13%)
Query: 70 LGRP--MEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR 127
LG P ME+ + +++G G +G+ + +K TG+ A K I R E +
Sbjct: 3 LGSPEFMENFQKV----EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTA 56
Query: 128 -REVQIMHHLTGQPNIVELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASL 185
RE+ ++ L PNIV+L + ++LV E L + F A S
Sbjct: 57 IREISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY 115
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVG 244
L ++Q + CHS V+HRDLKP+N L+ + +K DFGL+ F + V
Sbjct: 116 LFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVV 172
Query: 245 SAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID- 299
+ +Y APE+L + Y DIWS+G + ++ F +SE I R G D
Sbjct: 173 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 232
Query: 300 -----FTSDP--------W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
TS P W P + + L+ +ML+ DP +R++A LAHP
Sbjct: 233 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 292
Query: 338 WIKE 341
+ ++
Sbjct: 293 FFQD 296
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 68
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 69 KLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 129 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 113/247 (45%), Gaps = 47/247 (19%)
Query: 133 MHHLTGQPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNI+ L +D ++ LV E + F ++ T+ + I+
Sbjct: 83 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEIL 139
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHSMG++HRD+KP N ++ E+ L+ D+GL+ FY G+ + V S Y+
Sbjct: 140 KALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 197
Query: 251 PEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-----------GH 297
PE+L + Y D+WS+G ML ++ PF+ H ++ ++R +
Sbjct: 198 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKVLGTEDLYDY 255
Query: 298 ID---FTSDP-------------WPS---------ISPQAKDLVKKMLNSDPKQRLTATE 332
ID DP W +SP+A D + K+L D + RLTA E
Sbjct: 256 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 315
Query: 333 VLAHPWI 339
+ HP+
Sbjct: 316 AMEHPYF 322
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 113/247 (45%), Gaps = 47/247 (19%)
Query: 133 MHHLTGQPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNI+ L +D ++ LV E + F ++ T+ + I+
Sbjct: 84 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEIL 140
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHSMG++HRD+KP N ++ E+ L+ D+GL+ FY G+ + V S Y+
Sbjct: 141 KALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 198
Query: 251 PEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR-----------GH 297
PE+L + Y D+WS+G ML ++ PF+ H ++ ++R +
Sbjct: 199 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKVLGTEDLYDY 256
Query: 298 ID---FTSDP-------------WPS---------ISPQAKDLVKKMLNSDPKQRLTATE 332
ID DP W +SP+A D + K+L D + RLTA E
Sbjct: 257 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 316
Query: 333 VLAHPWI 339
+ HP+
Sbjct: 317 AMEHPYF 323
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 125/298 (41%), Gaps = 46/298 (15%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKED--IEDVRREVQIMHHLTGQPNIV 143
+LG G +G + T + A K I +L ++E+ REV ++ L + NI+
Sbjct: 41 KLGEGTYGEVYKAIDTVTNETVAIKRI---RLEHEEEGVPGTAIREVSLLKELQHR-NII 96
Query: 144 ELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIH 203
ELK +HL+ E A +L + + R S L ++ ++ CHS +H
Sbjct: 97 ELKSVIHHNHRLHLIFEY-AENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLH 155
Query: 204 RDLKPENFLLLNKD--ENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVL--KRKY 258
RDLKP+N LL D E LK DFGL+ F F + + +Y PE+L R Y
Sbjct: 156 RDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHY 215
Query: 259 GPEADIWSIGVMLYILLCGVPPFWAESE----HGIFNAILRGHIDFTSDPWPSIS--PQA 312
DIWSI + +L P F +SE IF + G D T+ WP ++ P
Sbjct: 216 STSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVL--GLPDDTT--WPGVTALPDW 271
Query: 313 KDLVKK------------------------MLNSDPKQRLTATEVLAHPWIKEDGEAP 346
K K ML DP +R++A L HP+ + P
Sbjct: 272 KQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDFDP 329
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 65
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVL 125
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 126 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 128/260 (49%), Gaps = 23/260 (8%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTI----AKRKLVNKEDIEDVRREVQIMHHLTG 138
+ K++G+G FG+ H A K++ ++ + E ++ +REV IM +L
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN- 81
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
PNIV+L G + +VME G+L+ R++ K H + + LR ++ I
Sbjct: 82 HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVK--LRLMLDIALGIEY 137
Query: 199 M-----GVIHRDLKPENFLLLNKDENSPL--KATDFGLSVFYKQGEVFKDIVGSAYYIAP 251
M ++HRDL+ N L + DEN+P+ K DFGLS + ++G+ ++AP
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS--QQSVHSVSGLLGNFQWMAP 195
Query: 252 EVL---KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGI-FNAILRGHIDFTSDPWPS 307
E + + Y +AD +S ++LY +L G PF S I F ++R + P
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIP-ED 254
Query: 308 ISPQAKDLVKKMLNSDPKQR 327
P+ +++++ + DPK+R
Sbjct: 255 CPPRLRNVIELCWSGDPKKR 274
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 65
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 126 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 65
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 126 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 64
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 125 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 66
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 127 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 121/287 (42%), Gaps = 32/287 (11%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LGRG FG H K TG Q A V K +E R E + P IV L
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCA---------VKKVRLEVFRAEELMACAGLTSPRIVPLY 132
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRDL 206
GA + V++ MEL GG L + +G E A L ++ + HS ++H D+
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDV 192
Query: 207 KPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV------GSAYYIAPE-VLKRKYG 259
K +N LL + ++ L DFG +V + + KD++ G+ ++APE VL R
Sbjct: 193 KADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCD 250
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS M+ +L G P W + G + + PS +P +++
Sbjct: 251 AKVDVWSSCCMMLHMLNGCHP-WTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEG 309
Query: 320 LNSDPKQRLTATEV-------------LAHPWIKEDGEAPDVPLDNA 353
L +P R++A E+ L PW E E P + A
Sbjct: 310 LRKEPIHRVSAAELGGKVNRALQQVGGLKSPWRGEYKEPRHPPPNQA 356
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 18/210 (8%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LG+G HK TG FA K + D++ RE +++ L NIV+L
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLN-HKNIVKLF 73
Query: 147 GAYEDKQSVH--LVMELCAGGELFDRIIAKGH---YTERAAASLLRTIVQIIHTCHSMGV 201
E+ + H L+ME C G L+ + + E +LR +V ++ G+
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 202 IHRDLKPENFL-LLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKR---- 256
+HR++KP N + ++ +D S K TDFG + + E F + G+ Y+ P++ +R
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLR 193
Query: 257 -----KYGPEADIWSIGVMLYILLCGVPPF 281
KYG D+WSIGV Y G PF
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 66
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 127 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM-- 133
DV Y+ +G G +G+ + A K I+ + ++ + RE++I+
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 97
Query: 134 ---HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ G +I+ E + V+LV L G +L+ +++ H + L I+
Sbjct: 98 FRHENIIGINDIIR-APTIEQMKDVYLVTHL-MGADLY-KLLKTQHLSNDHICYFLYQIL 154
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSA 246
+ + HS V+HRDLKP N LL + LK DFGL+ + + V +
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 247 YYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWA-------------------ES 285
+Y APE++ + Y DIWS+G +L +L P F E
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 271
Query: 286 EHGIFNAILRGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
+ I N R ++ PW P+ +A DL+ KML +P +R+ + LAHP
Sbjct: 272 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 331
Query: 338 WIKEDGEAPDVPLDNA 353
++++ + D P+ A
Sbjct: 332 YLEQYYDPSDEPIAEA 347
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 135/304 (44%), Gaps = 42/304 (13%)
Query: 70 LGRP--MEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR 127
LG P ME+ + +++G G +G+ + +K TG+ A K I R E +
Sbjct: 3 LGSPEFMENFQKV----EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTA 56
Query: 128 -REVQIMHHLTGQPNIVELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASL 185
RE+ ++ L PNIV+L + ++LV E L + F A S
Sbjct: 57 IREISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY 115
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVG 244
L ++Q + CHS V+HRDLKP+N L+ + +K DFGL+ F + V
Sbjct: 116 LFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVV 172
Query: 245 SAYYIAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID- 299
+ +Y APE+L + Y DIWS+G + ++ F +SE I R G D
Sbjct: 173 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 232
Query: 300 -----FTSDP--------W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
TS P W P + + L+ +ML+ DP +R++A LAHP
Sbjct: 233 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 292
Query: 338 WIKE 341
+ ++
Sbjct: 293 FFQD 296
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 69
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 70 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 129
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 130 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 186
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 187 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 246
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 247 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 64
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 125 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 181
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 65
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 126 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 64
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 125 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 65
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 126 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 18/210 (8%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LG+G HK TG FA K + D++ RE +++ L NIV+L
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLN-HKNIVKLF 73
Query: 147 GAYEDKQSVH--LVMELCAGGELFDRIIAKGH---YTERAAASLLRTIVQIIHTCHSMGV 201
E+ + H L+ME C G L+ + + E +LR +V ++ G+
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 202 IHRDLKPENFL-LLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKR---- 256
+HR++KP N + ++ +D S K TDFG + + E F + G+ Y+ P++ +R
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLR 193
Query: 257 -----KYGPEADIWSIGVMLYILLCGVPPF 281
KYG D+WSIGV Y G PF
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 65
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 126 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 65
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 126 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 43/247 (17%)
Query: 133 MHHLTGQPNIVELKGAYEDKQSV--HLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNIV+L D+ S L+ E D + T+ + ++
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELL 135
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHS G++HRD+KP N ++ E L+ D+GL+ FY G+ + V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 251 PEVLK--RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEH---------------GIFNA 292
PE+L + Y D+WS+G M ++ P F+ H ++
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 293 ILRGHID---------FTSDPWPS---------ISPQAKDLVKKMLNSDPKQRLTATEVL 334
R +D + PW +SP+A D + K+L D ++RLTA E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 335 AHPWIKE 341
HP+ ++
Sbjct: 314 THPYFQQ 320
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 67
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 68 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 127
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 128 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 245 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 68
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 69 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 129 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 67
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 68 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 127
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 128 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 245 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 68
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 69 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 129 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 66
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 127 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 183
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 43/247 (17%)
Query: 133 MHHLTGQPNIVELKGAYEDKQSV--HLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNIV+L D+ S L+ E D + T+ + ++
Sbjct: 80 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELL 136
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHS G++HRD+KP N ++ E L+ D+GL+ FY G+ + V S Y+
Sbjct: 137 KALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 194
Query: 251 PEVLK--RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEH---------------GIFNA 292
PE+L + Y D+WS+G M ++ P F+ H ++
Sbjct: 195 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 254
Query: 293 ILRGHID---------FTSDPWPS---------ISPQAKDLVKKMLNSDPKQRLTATEVL 334
R +D + PW +SP+A D + K+L D ++RLTA E +
Sbjct: 255 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 314
Query: 335 AHPWIKE 341
HP+ ++
Sbjct: 315 THPYFQQ 321
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 43/247 (17%)
Query: 133 MHHLTGQPNIVELKGAYEDKQSV--HLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNIV+L D+ S L+ E D + T+ + ++
Sbjct: 81 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELL 137
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHS G++HRD+KP N ++ E L+ D+GL+ FY G+ + V S Y+
Sbjct: 138 KALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 195
Query: 251 PEVLK--RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEH---------------GIFNA 292
PE+L + Y D+WS+G M ++ P F+ H ++
Sbjct: 196 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 255
Query: 293 ILRGHID---------FTSDPWPS---------ISPQAKDLVKKMLNSDPKQRLTATEVL 334
R +D + PW +SP+A D + K+L D ++RLTA E +
Sbjct: 256 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 315
Query: 335 AHPWIKE 341
HP+ ++
Sbjct: 316 THPYFQQ 322
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 109/247 (44%), Gaps = 43/247 (17%)
Query: 133 MHHLTGQPNIVELKGAYEDKQSV--HLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNIV+L D+ S L+ E D + T+ + ++
Sbjct: 100 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELL 156
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHS G++HRD+KP N ++ E L+ D+GL+ FY G+ + V S Y+
Sbjct: 157 KALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 214
Query: 251 PEVLK--RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGI------------FNAIL- 294
PE+L + Y D+WS+G M ++ P F+ H NA L
Sbjct: 215 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLN 274
Query: 295 --RGHID---------FTSDPWPS---------ISPQAKDLVKKMLNSDPKQRLTATEVL 334
R +D + PW +SP+A D + K+L D ++RLTA E +
Sbjct: 275 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 334
Query: 335 AHPWIKE 341
HP+ ++
Sbjct: 335 THPYFQQ 341
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 121/285 (42%), Gaps = 26/285 (9%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y G+ LG G HL + A K + + RRE Q L P
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HP 72
Query: 141 NIVELKGAYEDKQSV----HLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
IV + E + ++VME G L D + +G T + A ++ Q ++
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKD---IVGSAYYIAPE 252
H G+IHRD+KP N L+ + +K DFG++ G ++G+A Y++PE
Sbjct: 133 HQNGIIHRDVKPANILI---SATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE 189
Query: 253 VLK-RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP----- 306
+ +D++S+G +LY +L G PPF +S + +R DP P
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIPPSARH 243
Query: 307 -SISPQAKDLVKKMLNSDPKQRL-TATEVLAHPWIKEDGEAPDVP 349
+S +V K L +P+ R TA E+ A +GE P+ P
Sbjct: 244 EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 43/247 (17%)
Query: 133 MHHLTGQPNIVELKGAYEDKQSV--HLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNIV+L D+ S L+ E D + T+ + ++
Sbjct: 80 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELL 136
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHS G++HRD+KP N ++ E L+ D+GL+ FY G+ + V S Y+
Sbjct: 137 KALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 194
Query: 251 PEVLK--RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEH---------------GIFNA 292
PE+L + Y D+WS+G M ++ P F+ H ++
Sbjct: 195 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 254
Query: 293 ILRGHID---------FTSDPWPS---------ISPQAKDLVKKMLNSDPKQRLTATEVL 334
R +D + PW +SP+A D + K+L D ++RLTA E +
Sbjct: 255 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 314
Query: 335 AHPWIKE 341
HP+ ++
Sbjct: 315 THPYFQQ 321
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 64
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 125 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 181
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 130/316 (41%), Gaps = 58/316 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K +G G GI G A K ++ R N+ + RE+ ++
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLS-RPFQNQTHAKRAYREL-VLLKCVNHK 83
Query: 141 NIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
NI+ L + E+ Q V+LVMEL ++I ER + L + + I H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSYLLYQMLCGIKH 141
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV- 253
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV
Sbjct: 142 L-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVI 197
Query: 254 LKRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL------------------R 295
L Y DIWS+G ++ L+ G F +N ++ R
Sbjct: 198 LGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVR 257
Query: 296 GHID-------------FTSDPWPSIS-------PQAKDLVKKMLNSDPKQRLTATEVLA 335
+++ F +PS S QA+DL+ KML DP +R++ E L
Sbjct: 258 NYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALR 317
Query: 336 HPWIK-----EDGEAP 346
HP+I + EAP
Sbjct: 318 HPYITVWYDPAEAEAP 333
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 121/285 (42%), Gaps = 26/285 (9%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y G+ LG G HL + A K + + RRE Q L P
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HP 72
Query: 141 NIVELKGAYEDKQSV----HLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
IV + E + ++VME G L D + +G T + A ++ Q ++
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKD---IVGSAYYIAPE 252
H G+IHRD+KP N ++ + +K DFG++ G ++G+A Y++PE
Sbjct: 133 HQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 253 VLK-RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP----- 306
+ +D++S+G +LY +L G PPF +S + +R DP P
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVR------EDPIPPSARH 243
Query: 307 -SISPQAKDLVKKMLNSDPKQRL-TATEVLAHPWIKEDGEAPDVP 349
+S +V K L +P+ R TA E+ A +GE P+ P
Sbjct: 244 EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 145/321 (45%), Gaps = 54/321 (16%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHH 135
++ TY +G G +G K +G++ A K ++ R ++ + RE+ ++ H
Sbjct: 39 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-RPFQSEIFAKRAYRELLLLKH 97
Query: 136 LTGQPNIVELKGAYEDKQSV------HLVMELCAGGELFDRIIAKGHYTERAAASLLRTI 189
+ + N++ L + S+ +LVM +I+ ++E L+ +
Sbjct: 98 MQHE-NVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGM-EFSEEKIQYLVYQM 153
Query: 190 VQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYI 249
++ + HS GV+HRDLKP N L +E+ LK DFGL+ + E+ +V + +Y
Sbjct: 154 LKGLKYIHSAGVVHRDLKPGN---LAVNEDCELKILDFGLAR-HADAEMTGYVV-TRWYR 208
Query: 250 APEVLKR--KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL------------- 294
APEV+ Y DIWS+G ++ +L G F + IL
Sbjct: 209 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 268
Query: 295 ------RGHI---------DFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWI 339
+ +I DFT +P SPQA DL++KML D +RLTA + L HP+
Sbjct: 269 LNDKAAKSYIQSLPQTPRKDFTQ-LFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327
Query: 340 ------KEDGEAPDVPLDNAV 354
+E+ EA P D+++
Sbjct: 328 EPFRDPEEETEAQQ-PFDDSL 347
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 69
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 70 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 129
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 130 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 186
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 187 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 246
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 247 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 43/247 (17%)
Query: 133 MHHLTGQPNIVELKGAYEDKQSV--HLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNIV+L D+ S L+ E D + T+ + ++
Sbjct: 79 LQNLMGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELL 135
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHS G++HRD+KP N ++ E L+ D+GL+ FY G+ + V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 251 PEVLK--RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEH---------------GIFNA 292
PE+L + Y D+WS+G M ++ P F+ H ++
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 293 ILRGHID---------FTSDPWPS---------ISPQAKDLVKKMLNSDPKQRLTATEVL 334
R +D + PW +SP+A D + K+L D ++RLTA E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 335 AHPWIKE 341
HP+ ++
Sbjct: 314 THPYFQQ 320
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 134/315 (42%), Gaps = 56/315 (17%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH-----H 135
Y K +G G GI + A K ++ R N+ + RE+ +M +
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
+ G N+ + + E+ Q V++VMEL ++I ER + L + +V I H
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLVGIKH- 141
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV-L 254
HS G+IHRDLKP N ++ ++ LK DFGL+ + V + YY APEV L
Sbjct: 142 LHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 255 KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL------------------RG 296
Y DIWS+GV++ ++ G F +N ++ R
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 297 HID-------------FTSDPWPSIS-------PQAKDLVKKMLNSDPKQRLTATEVLAH 336
+++ F +P+ S QA+DL+ KML D +R++ E L H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 337 PWIK-----EDGEAP 346
P+I + EAP
Sbjct: 319 PYINVWYDPSEAEAP 333
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 43/247 (17%)
Query: 133 MHHLTGQPNIVELKGAYEDKQSV--HLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNIV+L D+ S L+ E D + T+ + ++
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELL 135
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHS G++HRD+KP N ++ E L+ D+GL+ FY G+ + V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 251 PEVLK--RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEH---------------GIFNA 292
PE+L + Y D+WS+G M ++ P F+ H ++
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 293 ILRGHID---------FTSDPWPS---------ISPQAKDLVKKMLNSDPKQRLTATEVL 334
R +D + PW +SP+A D + K+L D ++RLTA E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 335 AHPWIKE 341
HP+ ++
Sbjct: 314 THPYFQQ 320
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 43/247 (17%)
Query: 133 MHHLTGQPNIVELKGAYEDKQSV--HLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNIV+L D+ S L+ E D + T+ + ++
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELL 135
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHS G++HRD+KP N ++ E L+ D+GL+ FY G+ + V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 251 PEVLK--RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEH---------------GIFNA 292
PE+L + Y D+WS+G M ++ P F+ H ++
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 293 ILRGHID---------FTSDPWPS---------ISPQAKDLVKKMLNSDPKQRLTATEVL 334
R +D + PW +SP+A D + K+L D ++RLTA E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 335 AHPWIKE 341
HP+ ++
Sbjct: 314 THPYFQQ 320
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 43/247 (17%)
Query: 133 MHHLTGQPNIVELKGAYEDKQSV--HLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNIV+L D+ S L+ E D + T+ + ++
Sbjct: 79 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELL 135
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHS G++HRD+KP N ++ E L+ D+GL+ FY G+ + V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 251 PEVLK--RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEH---------------GIFNA 292
PE+L + Y D+WS+G M ++ P F+ H ++
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 293 ILRGHID---------FTSDPWPS---------ISPQAKDLVKKMLNSDPKQRLTATEVL 334
R +D + PW +SP+A D + K+L D ++RLTA E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 335 AHPWIKE 341
HP+ ++
Sbjct: 314 THPYFQQ 320
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 43/247 (17%)
Query: 133 MHHLTGQPNIVELKGAYEDKQSV--HLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
+ +L G PNIV+L D+ S L+ E D + T+ + ++
Sbjct: 79 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELL 135
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIA 250
+ + CHS G++HRD+KP N ++ E L+ D+GL+ FY G+ + V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 251 PEVLK--RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEH---------------GIFNA 292
PE+L + Y D+WS+G M ++ P F+ H ++
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 293 ILRGHID---------FTSDPWPS---------ISPQAKDLVKKMLNSDPKQRLTATEVL 334
R +D + PW +SP+A D + K+L D ++RLTA E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 335 AHPWIKE 341
HP+ ++
Sbjct: 314 THPYFQQ 320
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 134/315 (42%), Gaps = 56/315 (17%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH-----H 135
Y K +G G GI + A K ++ R N+ + RE+ +M +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
+ G N+ + + E+ Q V++VMEL ++I ER + L + +V I H
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLVGIKH- 141
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV-L 254
HS G+IHRDLKP N ++ ++ LK DFGL+ + V + YY APEV L
Sbjct: 142 LHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 255 KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL------------------RG 296
Y DIWS+GV++ ++ G F +N ++ R
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 297 HID-------------FTSDPWPSIS-------PQAKDLVKKMLNSDPKQRLTATEVLAH 336
+++ F +P+ S QA+DL+ KML D +R++ E L H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 337 PWIK-----EDGEAP 346
P+I + EAP
Sbjct: 319 PYINVWYDPSEAEAP 333
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 123/274 (44%), Gaps = 34/274 (12%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
E+G G G + TG A K + R+ NKE+ + + ++ ++ P IV+
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQM--RRSGNKEENKRILMDLDVVLKSHDCPYIVQC 89
Query: 146 KGAYEDKQSVHLVMEL---CAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC-HSMGV 201
G + V + MEL CA +L R+ +G ER + IV+ ++ GV
Sbjct: 90 FGTFITNTDVFIAMELMGTCAE-KLKKRM--QGPIPERILGKMTVAIVKALYYLKEKHGV 146
Query: 202 IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVL------K 255
IHRD+KP N LL DE +K DFG+S + G A Y+APE + K
Sbjct: 147 IHRDVKPSNILL---DERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTK 203
Query: 256 RKYGPEADIWSIGVMLYILLCGVPPFW-AESEHGIFNAILR-------GHIDFTSDPWPS 307
Y AD+WS+G+ L L G P+ +++ + +L+ GH+ F+ D
Sbjct: 204 PDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGD---- 259
Query: 308 ISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+ VK L D ++R ++L H +IK
Sbjct: 260 ----FQSFVKDCLTKDHRKRPKYNKLLEHSFIKR 289
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 121/285 (42%), Gaps = 26/285 (9%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y G+ LG G HL + A K + + RRE Q L P
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HP 72
Query: 141 NIVELKGAYEDKQSV----HLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
IV + E + ++VME G L D + +G T + A ++ Q ++
Sbjct: 73 AIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKD---IVGSAYYIAPE 252
H G+IHRD+KP N ++ + +K DFG++ G ++G+A Y++PE
Sbjct: 133 HQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 253 VLK-RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP----- 306
+ +D++S+G +LY +L G PPF +S + +R DP P
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIPPSARH 243
Query: 307 -SISPQAKDLVKKMLNSDPKQRL-TATEVLAHPWIKEDGEAPDVP 349
+S +V K L +P+ R TA E+ A +GE P+ P
Sbjct: 244 EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 140/324 (43%), Gaps = 66/324 (20%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDI----EDVRREVQ 131
DV Y + +G G +G+ + TGQQ A K K+ N D+ + RE++
Sbjct: 51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIK-----KIPNAFDVVTNAKRTLRELK 105
Query: 132 IMHHLTGQPNIVELKG------AYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASL 185
I+ H NI+ +K Y + +SV++V++L +L I + T
Sbjct: 106 ILKHFKHD-NIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYF 163
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDF----GLSVFYKQGEVF-K 240
L +++ + HS VIHRDLKP N L+ +EN LK DF GL + + F
Sbjct: 164 LYQLLRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMT 220
Query: 241 DIVGSAYYIAPEVL--KRKYGPEADIWSIGVM---------------------LYILLCG 277
+ V + +Y APE++ +Y D+WS+G + L +++ G
Sbjct: 221 EYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLG 280
Query: 278 VPPFWAESEHGIFNAI----LRGHIDFTSD----PWPSISP----QAKDLVKKMLNSDPK 325
P + A+ +R +I PW ++ P QA L+ +ML +P
Sbjct: 281 TP------SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPS 334
Query: 326 QRLTATEVLAHPWIKEDGEAPDVP 349
R++A L HP++ + + D P
Sbjct: 335 ARISAAAALRHPFLAKYHDPDDEP 358
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 141/327 (43%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G +G + A K ++ R + + RE
Sbjct: 42 LNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLS-RPFQSIIHAKRTYRE 100
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 101 LRLLKHMKHE-NVIGLLDVFTPATSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 157
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 158 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 212
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL------- 294
+ +Y APE++ Y DIWS+G ++ LL G F I+
Sbjct: 213 ATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPP 272
Query: 295 ------------RGHIDFT--------SDPWPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
R +I+ +D + +P A DL++KML D +R+TA+E L
Sbjct: 273 ASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEAL 332
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AHP+ + D E P D + SR
Sbjct: 333 AHPYFSQYHDPDDEPESEPYDQSFESR 359
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 140/324 (43%), Gaps = 66/324 (20%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDI----EDVRREVQ 131
DV Y + +G G +G+ + TGQQ A K K+ N D+ + RE++
Sbjct: 52 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIK-----KIPNAFDVVTNAKRTLRELK 106
Query: 132 IMHHLTGQPNIVELKG------AYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASL 185
I+ H NI+ +K Y + +SV++V++L +L I + T
Sbjct: 107 ILKHFKHD-NIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYF 164
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDF----GLSVFYKQGEVF-K 240
L +++ + HS VIHRDLKP N L+ +EN LK DF GL + + F
Sbjct: 165 LYQLLRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMT 221
Query: 241 DIVGSAYYIAPEVL--KRKYGPEADIWSIGVM---------------------LYILLCG 277
+ V + +Y APE++ +Y D+WS+G + L +++ G
Sbjct: 222 EYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLG 281
Query: 278 VPPFWAESEHGIFNAI----LRGHIDFTSD----PWPSISP----QAKDLVKKMLNSDPK 325
P + A+ +R +I PW ++ P QA L+ +ML +P
Sbjct: 282 TP------SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPS 335
Query: 326 QRLTATEVLAHPWIKEDGEAPDVP 349
R++A L HP++ + + D P
Sbjct: 336 ARISAAAALRHPFLAKYHDPDDEP 359
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 125/293 (42%), Gaps = 41/293 (13%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQ 139
Y +++G G +G+ + G+ A K I R E I RE+ ++ L
Sbjct: 23 YQKLEKVGEGTYGVVY-KAKDSQGRIVALKRI--RLDAEDEGIPSTAIREISLLKELH-H 78
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGG--ELFDRIIAKGHYTERAAASLLRTIVQIIHTCH 197
PNIV L ++ + LV E ++ D K + L +++ + CH
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 198 SMGVIHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVL-- 254
++HRDLKP+N LL+N D LK DFGL+ F + V + +Y AP+VL
Sbjct: 137 QHRILHRDLKPQN-LLINSD--GALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 255 KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL-------------------- 294
+KY DIWSIG + ++ G P F ++ I
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253
Query: 295 --RGHIDFTSDPWPSISP----QAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
R F PW SI P + DL+ ML DP +R++A + + HP+ K+
Sbjct: 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 125/293 (42%), Gaps = 41/293 (13%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQ 139
Y +++G G +G+ + G+ A K I R E I RE+ ++ L
Sbjct: 23 YQKLEKVGEGTYGVVYKAK-DSQGRIVALKRI--RLDAEDEGIPSTAIREISLLKELH-H 78
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGG--ELFDRIIAKGHYTERAAASLLRTIVQIIHTCH 197
PNIV L ++ + LV E ++ D K + L +++ + CH
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 198 SMGVIHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVL-- 254
++HRDLKP+N LL+N D LK DFGL+ F + V + +Y AP+VL
Sbjct: 137 QHRILHRDLKPQN-LLINSD--GALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 255 KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL-------------------- 294
+KY DIWSIG + ++ G P F ++ I
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253
Query: 295 --RGHIDFTSDPWPSISP----QAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
R F PW SI P + DL+ ML DP +R++A + + HP+ K+
Sbjct: 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 64
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E + + F A S L ++Q + CHS V+
Sbjct: 65 KLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 125 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 145/321 (45%), Gaps = 54/321 (16%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHH 135
++ TY +G G +G K +G++ A K ++ R ++ + RE+ ++ H
Sbjct: 21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-RPFQSEIFAKRAYRELLLLKH 79
Query: 136 LTGQPNIVELKGAYEDKQSV------HLVMELCAGGELFDRIIAKGHYTERAAASLLRTI 189
+ + N++ L + S+ +LVM +I+ ++E L+ +
Sbjct: 80 MQHE-NVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGL-KFSEEKIQYLVYQM 135
Query: 190 VQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYI 249
++ + HS GV+HRDLKP N L +E+ LK DFGL+ + E+ +V + +Y
Sbjct: 136 LKGLKYIHSAGVVHRDLKPGN---LAVNEDCELKILDFGLAR-HADAEMTGYVV-TRWYR 190
Query: 250 APEVLKR--KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL------------- 294
APEV+ Y DIWS+G ++ +L G F + IL
Sbjct: 191 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 250
Query: 295 ------RGHI---------DFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWI 339
+ +I DFT +P SPQA DL++KML D +RLTA + L HP+
Sbjct: 251 LNDKAAKSYIQSLPQTPRKDFTQ-LFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309
Query: 340 ------KEDGEAPDVPLDNAV 354
+E+ EA P D+++
Sbjct: 310 EPFRDPEEETEAQQ-PFDDSL 329
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 130/316 (41%), Gaps = 58/316 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K +G G GI G A K ++ R N+ + RE+ ++
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLS-RPFQNQTHAKRAYREL-VLLKCVNHK 81
Query: 141 NIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
NI+ L + E+ Q V+LVMEL ++I ER + L + + I H
Sbjct: 82 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSYLLYQMLCGIKH 139
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV- 253
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV
Sbjct: 140 -LHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVI 195
Query: 254 LKRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL------------------R 295
L Y DIWS+G ++ L+ G F +N ++ R
Sbjct: 196 LGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVR 255
Query: 296 GHID-------------FTSDPWPSIS-------PQAKDLVKKMLNSDPKQRLTATEVLA 335
+++ F +PS S QA+DL+ KML DP +R++ E L
Sbjct: 256 NYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALR 315
Query: 336 HPWIK-----EDGEAP 346
HP+I + EAP
Sbjct: 316 HPYITVWYDPAEAEAP 331
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 121/285 (42%), Gaps = 26/285 (9%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y G+ LG G HL + A K + + RRE Q L P
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HP 72
Query: 141 NIVELKGAYEDKQSV----HLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
IV + E + ++VME G L D + +G T + A ++ Q ++
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKD---IVGSAYYIAPE 252
H G+IHRD+KP N ++ + +K DFG++ G ++G+A Y++PE
Sbjct: 133 HQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 253 VLK-RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP----- 306
+ +D++S+G +LY +L G PPF +S + +R DP P
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIPPSARH 243
Query: 307 -SISPQAKDLVKKMLNSDPKQRL-TATEVLAHPWIKEDGEAPDVP 349
+S +V K L +P+ R TA E+ A +GE P+ P
Sbjct: 244 EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 121/266 (45%), Gaps = 21/266 (7%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
ELGRG +G+ H +GQ A K I R VN ++ + + ++ I P V
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVDCPFTVTF 115
Query: 146 KGAYEDKQSVHLVMEL--CAGGELFDRIIAKGH-YTERAAASLLRTIVQIIHTCHS-MGV 201
GA + V + MEL + + + ++I KG E + +IV+ + HS + V
Sbjct: 116 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 175
Query: 202 IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDI-VGSAYYIAPEVL-----K 255
IHRD+KP N L+ + +K DFG+S Y V K I G Y+APE + +
Sbjct: 176 IHRDVKPSNVLI---NALGQVKMCDFGIS-GYLVDSVAKTIDAGCKPYMAPERINPELNQ 231
Query: 256 RKYGPEADIWSIGVMLYILLCGVPPF--WAESEHGIFNAILRGHIDFTSDPWPSISPQAK 313
+ Y ++DIWS+G+ + L P+ W + + +D + S +
Sbjct: 232 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF---SAEFV 288
Query: 314 DLVKKMLNSDPKQRLTATEVLAHPWI 339
D + L + K+R T E++ HP+
Sbjct: 289 DFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A K I R E + RE+ ++ L PNIV
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 68
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E + + F A S L ++Q + CHS V+
Sbjct: 69 KLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 129 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 121/285 (42%), Gaps = 26/285 (9%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y G+ LG G HL + A K + + RRE Q L P
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HP 72
Query: 141 NIVELKGAYEDKQSV----HLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
IV + E + ++VME G L D + +G T + A ++ Q ++
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKD---IVGSAYYIAPE 252
H G+IHRD+KP N ++ + +K DFG++ G ++G+A Y++PE
Sbjct: 133 HQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 253 VLK-RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP----- 306
+ +D++S+G +LY +L G PPF +S + +R DP P
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIPPSARH 243
Query: 307 -SISPQAKDLVKKMLNSDPKQRL-TATEVLAHPWIKEDGEAPDVP 349
+S +V K L +P+ R TA E+ A +GE P+ P
Sbjct: 244 EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 140/320 (43%), Gaps = 47/320 (14%)
Query: 69 VLGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR 128
V G+P DV Y+ + +G G +G+ + A K I+ + ++ + R
Sbjct: 34 VKGQPF-DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFE--HQTYCQRTLR 90
Query: 129 EVQIMHHLTGQPNIVELK-----GAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
E+QI+ + N++ ++ E + V++V +L +L+ +++ +
Sbjct: 91 EIQILLRFRHE-NVIGIRDILRASTLEAMRDVYIVQDLMET-DLY-KLLKSQQLSNDHIC 147
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVF 239
L I++ + HS V+HRDLKP N L+ + LK DFGL+ +
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLI---NTTCDLKICDFGLARIADPEHDHTGFL 204
Query: 240 KDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWA-------------- 283
+ V + +Y APE++ + Y DIWS+G +L +L P F
Sbjct: 205 TEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 264
Query: 284 -----ESEHGIFNAILRGHIDF----TSDPWPSISP----QAKDLVKKMLNSDPKQRLTA 330
E + I N R ++ T W + P +A DL+ +ML +P +R+T
Sbjct: 265 GSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITV 324
Query: 331 TEVLAHPWIKEDGEAPDVPL 350
E LAHP++++ + D P+
Sbjct: 325 EEALAHPYLEQYYDPTDEPV 344
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 126/305 (41%), Gaps = 55/305 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K +G G GI + A K ++ R N+ + RE+ +M + +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXVNHK- 83
Query: 141 NIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
NI+ L + E+ Q V+LVMEL ++I ER + L + + I H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLXGIKH 141
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV- 253
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV
Sbjct: 142 -LHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 254 LKRKYGPEADIWSIGVML------YILLCG-----------------VPPFWAESEHGIF 290
L Y DIWS+G ++ IL G P F + + +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 291 NAILRGHIDFTSDPWPSISP----------------QAKDLVKKMLNSDPKQRLTATEVL 334
N + + +P + P QA+DL+ KML DP +R++ + L
Sbjct: 258 NYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 335 AHPWI 339
HP+I
Sbjct: 317 QHPYI 321
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 126/305 (41%), Gaps = 55/305 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K +G G GI + A K ++ R N+ + RE+ +M + +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXVNHK- 83
Query: 141 NIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
NI+ L + E+ Q V+LVMEL ++I ER + L + + I H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV- 253
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV
Sbjct: 142 -LHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 254 LKRKYGPEADIWSIGVML------YILLCG-----------------VPPFWAESEHGIF 290
L Y DIWS+G ++ IL G P F + + +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 291 NAILRGHIDFTSDPWPSISP----------------QAKDLVKKMLNSDPKQRLTATEVL 334
N + + +P + P QA+DL+ KML DP +R++ + L
Sbjct: 258 NYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 335 AHPWI 339
HP+I
Sbjct: 317 QHPYI 321
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 127/260 (48%), Gaps = 23/260 (8%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTI----AKRKLVNKEDIEDVRREVQIMHHLTG 138
+ K++G+G FG+ H A K++ ++ + E ++ +REV IM +L
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN- 81
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
PNIV+L G + +VME G+L+ R++ K H + + LR ++ I
Sbjct: 82 HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVK--LRLMLDIALGIEY 137
Query: 199 M-----GVIHRDLKPENFLLLNKDENSPL--KATDFGLSVFYKQGEVFKDIVGSAYYIAP 251
M ++HRDL+ N L + DEN+P+ K DFG S + ++G+ ++AP
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS--QQSVHSVSGLLGNFQWMAP 195
Query: 252 EVL---KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGI-FNAILRGHIDFTSDPWPS 307
E + + Y +AD +S ++LY +L G PF S I F ++R + P
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIP-ED 254
Query: 308 ISPQAKDLVKKMLNSDPKQR 327
P+ +++++ + DPK+R
Sbjct: 255 CPPRLRNVIELCWSGDPKKR 274
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 127/260 (48%), Gaps = 23/260 (8%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTI----AKRKLVNKEDIEDVRREVQIMHHLTG 138
+ K++G+G FG+ H A K++ ++ + E ++ +REV IM +L
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN- 81
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
PNIV+L G + +VME G+L+ R++ K H + + LR ++ I
Sbjct: 82 HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVK--LRLMLDIALGIEY 137
Query: 199 M-----GVIHRDLKPENFLLLNKDENSPL--KATDFGLSVFYKQGEVFKDIVGSAYYIAP 251
M ++HRDL+ N L + DEN+P+ K DF LS + ++G+ ++AP
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS--QQSVHSVSGLLGNFQWMAP 195
Query: 252 EVL---KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGI-FNAILRGHIDFTSDPWPS 307
E + + Y +AD +S ++LY +L G PF S I F ++R + P
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIP-ED 254
Query: 308 ISPQAKDLVKKMLNSDPKQR 327
P+ +++++ + DPK+R
Sbjct: 255 CPPRLRNVIELCWSGDPKKR 274
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 124/305 (40%), Gaps = 55/305 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K +G G GI + A K ++ R N+ + RE+ +M
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHK 83
Query: 141 NIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
NI+ L + E+ Q V+LVMEL ++I ER + L + + I H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLXGIKH 141
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV- 253
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV
Sbjct: 142 -LHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 254 LKRKYGPEADIWSIGVML------YILLCG-----------------VPPFWAESEHGIF 290
L Y DIWS+G ++ IL G P F + + +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 291 NAILRGHIDFTSDPWPSISP----------------QAKDLVKKMLNSDPKQRLTATEVL 334
N + + +P + P QA+DL+ KML DP +R++ + L
Sbjct: 258 NYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 335 AHPWI 339
HP+I
Sbjct: 317 QHPYI 321
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 127/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A I R E + RE+ ++ L PNIV
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 65
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 126 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 127/287 (44%), Gaps = 36/287 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
+++G G +G+ + +K TG+ A I R E + RE+ ++ L PNIV
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKI--RLDTETEGVPSTAIREISLLKEL-NHPNIV 64
Query: 144 ELKGAYEDKQSVHLVME-LCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVI 202
+L + ++LV E L + F A S L ++Q + CHS V+
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVLK--RKYG 259
HRDLKP+N L+ + +K DFGL+ F + V + +Y APE+L + Y
Sbjct: 125 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR--GHID------FTSDP------- 304
DIWS+G + ++ F +SE I R G D TS P
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 305 -W---------PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
W P + + L+ +ML+ DP +R++A LAHP+ ++
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 127/278 (45%), Gaps = 25/278 (8%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
RP + ++ LG G +G K G+ +A KR + +D R++
Sbjct: 50 RPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYA----VKRSMSPFRGPKDRARKLA 105
Query: 132 IM--HHLTGQ-PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKG-HYTERAAASLLR 187
+ H GQ P V L+ A+E+ ++L ELC G L A G E LR
Sbjct: 106 EVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLR 164
Query: 188 TIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY 247
+ + HS G++H D+KP N L + K DFGL V + G
Sbjct: 165 DTLLALAHLHSQGLVHLDVKPANIFLGPRGR---CKLGDFGLLVELGTAGAGEVQEGDPR 221
Query: 248 YIAPEVLKRKYGPEADIWSIGVMLYILLCGVPPFWAESEHG--IFNAILRGHI--DFTSD 303
Y+APE+L+ YG AD++S+G+ + + C + E HG + + +G++ +FT+
Sbjct: 222 YMAPELLQGSYGTAADVFSLGLTILEVACNM-----ELPHGGEGWQQLRQGYLPPEFTA- 275
Query: 304 PWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+S + + ++ ML DPK R TA +LA P +++
Sbjct: 276 ---GLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 124/305 (40%), Gaps = 55/305 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K +G G GI + A K ++ R N+ + RE+ +M
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHK 121
Query: 141 NIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
NI+ L + E+ Q V+LVMEL ++I ER + L + + I H
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKH 179
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV- 253
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV
Sbjct: 180 L-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 235
Query: 254 LKRKYGPEADIWSIGVML------YILLCG-----------------VPPFWAESEHGIF 290
L Y DIWS+G ++ IL G P F + + +
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 295
Query: 291 NAILRGHIDFTSDPWPSISP----------------QAKDLVKKMLNSDPKQRLTATEVL 334
N + + +P + P QA+DL+ KML DP +R++ + L
Sbjct: 296 NYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 354
Query: 335 AHPWI 339
HP+I
Sbjct: 355 QHPYI 359
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 112/254 (44%), Gaps = 19/254 (7%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LGRG FG H K TG Q A V K +E R E + P IV L
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCA---------VKKVRLEVFRAEELMACAGLTSPRIVPLY 151
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRDL 206
GA + V++ MEL GG L + +G E A L ++ + HS ++H D+
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDV 211
Query: 207 KPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV------GSAYYIAPE-VLKRKYG 259
K +N LL + ++ L DFG +V + + K ++ G+ ++APE VL R
Sbjct: 212 KADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCD 269
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ D+WS M+ +L G P W + G + + PS +P +++
Sbjct: 270 AKVDVWSSCCMMLHMLNGCHP-WTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEG 328
Query: 320 LNSDPKQRLTATEV 333
L +P R++A E+
Sbjct: 329 LRKEPIHRVSAAEL 342
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 133/315 (42%), Gaps = 56/315 (17%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH-----H 135
Y K +G G GI + A K ++ R N+ + RE+ +M +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
+ G N+ + + E+ Q V++VMEL ++I ER + L + +V I H
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLVGIKH- 141
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV-L 254
HS G+IHRDLKP N ++ ++ LK DFGL+ + V + YY APEV L
Sbjct: 142 LHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 255 KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL------------------RG 296
Y DIWS+G ++ ++ G F +N ++ R
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 297 HID-------------FTSDPWPSIS-------PQAKDLVKKMLNSDPKQRLTATEVLAH 336
+++ F +P+ S QA+DL+ KML D +R++ E L H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 337 PWIK-----EDGEAP 346
P+I + EAP
Sbjct: 319 PYINVWYDPSEAEAP 333
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 42/189 (22%)
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYY 248
+++ + CHS G++HRD+KP N ++ + L+ D+GL+ FY + + V S Y+
Sbjct: 146 LLKALDYCHSKGIMHRDVKPHNVMI--DHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYF 203
Query: 249 IAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHG--------------IFNA 292
PE+L + Y D+WS+G ML ++ PF+ ++ ++
Sbjct: 204 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGY 263
Query: 293 ILRGHIDFTSDP-------------WPS---------ISPQAKDLVKKMLNSDPKQRLTA 330
+ + HID DP W + +SP+A DL+ K+L D +QRLTA
Sbjct: 264 LKKYHIDL--DPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTA 321
Query: 331 TEVLAHPWI 339
E + HP+
Sbjct: 322 KEAMEHPYF 330
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 46/310 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHH 135
+V+A Y + +G G +G TG + A K + R ++ + RE++++ H
Sbjct: 22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLY-RPFQSELFAKRAYRELRLLKH 80
Query: 136 LTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTI 189
+ + N++ L + +D +LVM G +++ E L+ +
Sbjct: 81 MRHE-NVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQM 137
Query: 190 VQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEV-FKDIVGSAYY 248
++ + H+ G+IHRDLKP N L +E+ LK DFGL+ +Q + V + +Y
Sbjct: 138 LKGLRYIHAAGIIHRDLKPGN---LAVNEDCELKILDFGLA---RQADSEMXGXVVTRWY 191
Query: 249 IAPEVLKR--KYGPEADIWSIGVMLYILL---------------------CGVPP--FWA 283
APEV+ +Y DIWS+G ++ ++ G PP F
Sbjct: 192 RAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 251
Query: 284 ESEHGIFNAILRGHIDFTSDPWPSI----SPQAKDLVKKMLNSDPKQRLTATEVLAHPWI 339
+ ++G + + SI SP A +L++KML D +QR+TA E LAHP+
Sbjct: 252 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311
Query: 340 KEDGEAPDVP 349
+ + D P
Sbjct: 312 ESLHDTEDEP 321
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM-- 133
DV Y+ +G G +G+ + A K I+ + ++ + RE++I+
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLA 79
Query: 134 ---HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ G +I+ E + V++V +L +L+ +++ H + L I+
Sbjct: 80 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 136
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSA 246
+ + HS V+HRDLKP N LL + S LK DFGL+ + + V +
Sbjct: 137 RGLKYIHSANVLHRDLKPSNLLL---NTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 247 YYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL---------- 294
+Y APE++ + Y DIWS+G +L +L P F + N IL
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 253
Query: 295 ---------RGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
R ++ PW P+ +A DL+ KML +P +R+ + LAHP
Sbjct: 254 LNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 313
Query: 338 WIKEDGEAPDVPLDNA 353
++ + + D P+ A
Sbjct: 314 YLAQYYDPSDEPIAEA 329
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 124/305 (40%), Gaps = 55/305 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K +G G GI + A K ++ R N+ + RE+ +M
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHK 76
Query: 141 NIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
NI+ L + E+ Q V+LVMEL ++I ER + L + + I H
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLXGIKH 134
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV- 253
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV
Sbjct: 135 -LHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 190
Query: 254 LKRKYGPEADIWSIGVML------YILLCG-----------------VPPFWAESEHGIF 290
L Y DIWS+G ++ IL G P F + + +
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250
Query: 291 NAILRGHIDFTSDPWPSISP----------------QAKDLVKKMLNSDPKQRLTATEVL 334
N + + +P + P QA+DL+ KML DP +R++ + L
Sbjct: 251 NYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 309
Query: 335 AHPWI 339
HP+I
Sbjct: 310 QHPYI 314
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 126/305 (41%), Gaps = 55/305 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K +G G GI + A K ++ R N+ + RE+ +M + +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXVNHK- 83
Query: 141 NIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
NI+ L + E+ Q V+LVMEL ++I ER + L + + I H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV- 253
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV
Sbjct: 142 -LHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 254 LKRKYGPEADIWSIGVML------YILLCG-----------------VPPFWAESEHGIF 290
L Y DIWS+G ++ IL G P F + + +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 291 NAILRGHIDFTSDPWPSISP----------------QAKDLVKKMLNSDPKQRLTATEVL 334
N + + +P + P QA+DL+ KML DP +R++ + L
Sbjct: 258 NYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 335 AHPWI 339
HP+I
Sbjct: 317 QHPYI 321
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 124/305 (40%), Gaps = 55/305 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K +G G GI + A K ++ R N+ + RE+ +M
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHK 83
Query: 141 NIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
NI+ L + E+ Q V+LVMEL ++I ER + L + + I H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV- 253
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV
Sbjct: 142 L-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 254 LKRKYGPEADIWSIGVML------YILLCG-----------------VPPFWAESEHGIF 290
L Y DIWS+G ++ IL G P F + + +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 291 NAILRGHIDFTSDPWPSISP----------------QAKDLVKKMLNSDPKQRLTATEVL 334
N + + +P + P QA+DL+ KML DP +R++ + L
Sbjct: 258 NYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 335 AHPWI 339
HP+I
Sbjct: 317 QHPYI 321
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 124/305 (40%), Gaps = 55/305 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K +G G GI + A K ++ R N+ + RE+ +M
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHK 121
Query: 141 NIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
NI+ L + E+ Q V+LVMEL ++I ER + L + + I H
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKH 179
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV- 253
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV
Sbjct: 180 L-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 235
Query: 254 LKRKYGPEADIWSIGVML------YILLCG-----------------VPPFWAESEHGIF 290
L Y DIWS+G ++ IL G P F + + +
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 295
Query: 291 NAILRGHIDFTSDPWPSISP----------------QAKDLVKKMLNSDPKQRLTATEVL 334
N + + +P + P QA+DL+ KML DP +R++ + L
Sbjct: 296 NYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 354
Query: 335 AHPWI 339
HP+I
Sbjct: 355 QHPYI 359
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 124/305 (40%), Gaps = 55/305 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K +G G GI + A K ++ R N+ + RE+ +M
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHK 82
Query: 141 NIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
NI+ L + E+ Q V+LVMEL ++I ER + L + + I H
Sbjct: 83 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKH 140
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV- 253
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV
Sbjct: 141 L-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 196
Query: 254 LKRKYGPEADIWSIGVML------YILLCG-----------------VPPFWAESEHGIF 290
L Y DIWS+G ++ IL G P F + + +
Sbjct: 197 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 256
Query: 291 NAILRGHIDFTSDPWPSISP----------------QAKDLVKKMLNSDPKQRLTATEVL 334
N + + +P + P QA+DL+ KML DP +R++ + L
Sbjct: 257 NYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 315
Query: 335 AHPWI 339
HP+I
Sbjct: 316 QHPYI 320
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 124/305 (40%), Gaps = 55/305 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K +G G GI + A K ++ R N+ + RE+ +M
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHK 84
Query: 141 NIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
NI+ L + E+ Q V+LVMEL ++I ER + L + + I H
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKH 142
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV- 253
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV
Sbjct: 143 L-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 198
Query: 254 LKRKYGPEADIWSIGVML------YILLCG-----------------VPPFWAESEHGIF 290
L Y DIWS+G ++ IL G P F + + +
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 258
Query: 291 NAILRGHIDFTSDPWPSISP----------------QAKDLVKKMLNSDPKQRLTATEVL 334
N + + +P + P QA+DL+ KML DP +R++ + L
Sbjct: 259 NYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 317
Query: 335 AHPWI 339
HP+I
Sbjct: 318 QHPYI 322
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 124/305 (40%), Gaps = 55/305 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K +G G GI + A K ++ R N+ + RE+ +M
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHK 83
Query: 141 NIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
NI+ L + E+ Q V+LVMEL ++I ER + L + + I H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV- 253
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV
Sbjct: 142 L-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 254 LKRKYGPEADIWSIGVML------YILLCG-----------------VPPFWAESEHGIF 290
L Y DIWS+G ++ IL G P F + + +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 291 NAILRGHIDFTSDPWPSISP----------------QAKDLVKKMLNSDPKQRLTATEVL 334
N + + +P + P QA+DL+ KML DP +R++ + L
Sbjct: 258 NYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 335 AHPWI 339
HP+I
Sbjct: 317 QHPYI 321
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 139/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G + I+ T+
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQ 128
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+S LK DFGL + V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDSELKILDFGLC--RHTDDEMTGYV 183
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D ++ SR
Sbjct: 304 AHAYFAQYHDPDDEPVADPYDQSLESR 330
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 124/305 (40%), Gaps = 55/305 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K +G G GI + A K ++ R N+ + RE+ +M
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHK 84
Query: 141 NIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
NI+ L + E+ Q V+LVMEL ++I ER + L + + I H
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKH 142
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV- 253
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV
Sbjct: 143 L-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 198
Query: 254 LKRKYGPEADIWSIGVML------YILLCG-----------------VPPFWAESEHGIF 290
L Y DIWS+G ++ IL G P F + + +
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 258
Query: 291 NAILRGHIDFTSDPWPSISP----------------QAKDLVKKMLNSDPKQRLTATEVL 334
N + + +P + P QA+DL+ KML DP +R++ + L
Sbjct: 259 NYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 317
Query: 335 AHPWI 339
HP+I
Sbjct: 318 QHPYI 322
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 126/284 (44%), Gaps = 41/284 (14%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQ------- 139
LG+G FG + + +A K I +E + + EV ++ L Q
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 140 -----PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTER-AAASLLRTIVQII 193
N V+ A + K ++ + ME C G L+D I ++ +R L R I++ +
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 194 HTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFK------------ 240
HS G+IHRDLKP N + DE+ +K DFGL+ ++ ++ K
Sbjct: 130 SYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 241 --DIVGSAYYIAPEVLKRK--YGPEADIWSIGVMLYILLCGVPPFWAESEH-GIFNAILR 295
+G+A Y+A EVL Y + D++S+G++ + ++ PF E I +
Sbjct: 187 LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRS 243
Query: 296 GHIDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWI 339
I+F D + K +++ +++ DP +R A +L W+
Sbjct: 244 VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 124/305 (40%), Gaps = 55/305 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K +G G GI + A K ++ R N+ + RE+ +M
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHK 76
Query: 141 NIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
NI+ L + E+ Q V+LVMEL ++I ER + L + + I H
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKH 134
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV- 253
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV
Sbjct: 135 L-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 190
Query: 254 LKRKYGPEADIWSIGVML------YILLCG-----------------VPPFWAESEHGIF 290
L Y DIWS+G ++ IL G P F + + +
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250
Query: 291 NAILRGHIDFTSDPWPSISP----------------QAKDLVKKMLNSDPKQRLTATEVL 334
N + + +P + P QA+DL+ KML DP +R++ + L
Sbjct: 251 NYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 309
Query: 335 AHPWI 339
HP+I
Sbjct: 310 QHPYI 314
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 124/305 (40%), Gaps = 55/305 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K +G G GI + A K ++ R N+ + RE+ +M
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHK 77
Query: 141 NIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
NI+ L + E+ Q V+LVMEL ++I ER + L + + I H
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKH 135
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV- 253
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV
Sbjct: 136 L-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 191
Query: 254 LKRKYGPEADIWSIGVML------YILLCG-----------------VPPFWAESEHGIF 290
L Y DIWS+G ++ IL G P F + + +
Sbjct: 192 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 251
Query: 291 NAILRGHIDFTSDPWPSISP----------------QAKDLVKKMLNSDPKQRLTATEVL 334
N + + +P + P QA+DL+ KML DP +R++ + L
Sbjct: 252 NYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 310
Query: 335 AHPWI 339
HP+I
Sbjct: 311 QHPYI 315
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 124/305 (40%), Gaps = 55/305 (18%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y K +G G GI + A K ++ R N+ + RE+ +M
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHK 77
Query: 141 NIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH 194
NI+ L + E+ Q V+LVMEL ++I ER + L + + I H
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKH 135
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV- 253
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV
Sbjct: 136 L-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 191
Query: 254 LKRKYGPEADIWSIGVML------YILLCG-----------------VPPFWAESEHGIF 290
L Y DIWS+G ++ IL G P F + + +
Sbjct: 192 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 251
Query: 291 NAILRGHIDFTSDPWPSISP----------------QAKDLVKKMLNSDPKQRLTATEVL 334
N + + +P + P QA+DL+ KML DP +R++ + L
Sbjct: 252 NYV-ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 310
Query: 335 AHPWI 339
HP+I
Sbjct: 311 QHPYI 315
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM-- 133
DV Y+ +G G +G+ + A K I+ + ++ + RE++I+
Sbjct: 28 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 85
Query: 134 ---HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ G +I+ E + V++V +L +L+ +++ H + L I+
Sbjct: 86 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 142
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSA 246
+ + HS V+HRDLKP N LL + LK DFGL+ + + V +
Sbjct: 143 RGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 247 YYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWA-------------------ES 285
+Y APE++ + Y DIWS+G +L +L P F E
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 259
Query: 286 EHGIFNAILRGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
+ I N R ++ PW P+ +A DL+ KML +P +R+ + LAHP
Sbjct: 260 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 319
Query: 338 WIKEDGEAPDVPLDNA 353
++++ + D P+ A
Sbjct: 320 YLEQYYDPSDEPIAEA 335
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM-- 133
DV Y+ +G G +G+ + A K I+ + ++ + RE++I+
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 77
Query: 134 ---HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ G +I+ E + V++V +L +L+ +++ H + L I+
Sbjct: 78 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 134
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSA 246
+ + HS V+HRDLKP N LL + LK DFGL+ + + V +
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 247 YYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWA-------------------ES 285
+Y APE++ + Y DIWS+G +L +L P F E
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 286 EHGIFNAILRGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
+ I N R ++ PW P+ +A DL+ KML +P +R+ + LAHP
Sbjct: 252 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 338 WIKEDGEAPDVPLDNA 353
++++ + D P+ A
Sbjct: 312 YLEQYYDPSDEPIAEA 327
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM-- 133
DV Y+ +G G +G+ + A K I+ + ++ + RE++I+
Sbjct: 25 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 82
Query: 134 ---HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ G +I+ E + V++V +L +L+ +++ H + L I+
Sbjct: 83 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 139
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSA 246
+ + HS V+HRDLKP N LL + LK DFGL+ + + V +
Sbjct: 140 RGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 247 YYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWA-------------------ES 285
+Y APE++ + Y DIWS+G +L +L P F E
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 256
Query: 286 EHGIFNAILRGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
+ I N R ++ PW P+ +A DL+ KML +P +R+ + LAHP
Sbjct: 257 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 316
Query: 338 WIKEDGEAPDVPLDNA 353
++++ + D P+ A
Sbjct: 317 YLEQYYDPSDEPIAEA 332
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM-- 133
DV Y+ +G G +G+ + A K I+ + ++ + RE++I+
Sbjct: 26 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 83
Query: 134 ---HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ G +I+ E + V++V +L +L+ +++ H + L I+
Sbjct: 84 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 140
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSA 246
+ + HS V+HRDLKP N LL + LK DFGL+ + + V +
Sbjct: 141 RGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 247 YYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWA-------------------ES 285
+Y APE++ + Y DIWS+G +L +L P F E
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 257
Query: 286 EHGIFNAILRGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
+ I N R ++ PW P+ +A DL+ KML +P +R+ + LAHP
Sbjct: 258 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 317
Query: 338 WIKEDGEAPDVPLDNA 353
++++ + D P+ A
Sbjct: 318 YLEQYYDPSDEPIAEA 333
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM-- 133
DV Y+ +G G +G+ + A K I+ + ++ + RE++I+
Sbjct: 17 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 74
Query: 134 ---HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ G +I+ E + V++V +L +L+ +++ H + L I+
Sbjct: 75 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 131
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSA 246
+ + HS V+HRDLKP N LL + LK DFGL+ + + V +
Sbjct: 132 RGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 247 YYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWA-------------------ES 285
+Y APE++ + Y DIWS+G +L +L P F E
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 248
Query: 286 EHGIFNAILRGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
+ I N R ++ PW P+ +A DL+ KML +P +R+ + LAHP
Sbjct: 249 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 308
Query: 338 WIKEDGEAPDVPLDNA 353
++++ + D P+ A
Sbjct: 309 YLEQYYDPSDEPIAEA 324
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM-- 133
DV Y+ +G G +G+ + A K I+ + ++ + RE++I+
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 81
Query: 134 ---HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ G +I+ E + V++V +L +L+ +++ H + L I+
Sbjct: 82 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 138
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSA 246
+ + HS V+HRDLKP N LL + LK DFGL+ + + V +
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 247 YYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWA-------------------ES 285
+Y APE++ + Y DIWS+G +L +L P F E
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
Query: 286 EHGIFNAILRGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
+ I N R ++ PW P+ +A DL+ KML +P +R+ + LAHP
Sbjct: 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315
Query: 338 WIKEDGEAPDVPLDNA 353
++++ + D P+ A
Sbjct: 316 YLEQYYDPSDEPIAEA 331
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM-- 133
DV Y+ +G G +G+ + A K I+ + ++ + RE++I+
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 77
Query: 134 ---HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ G +I+ E + V++V +L +L+ +++ H + L I+
Sbjct: 78 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 134
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSA 246
+ + HS V+HRDLKP N LL + LK DFGL+ + + V +
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 247 YYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPF-------------------WAES 285
+Y APE++ + Y DIWS+G +L +L P F E
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 286 EHGIFNAILRGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
+ I N R ++ PW P+ +A DL+ KML +P +R+ + LAHP
Sbjct: 252 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 338 WIKEDGEAPDVPLDNA 353
++++ + D P+ A
Sbjct: 312 YLEQYYDPSDEPIAEA 327
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM-- 133
DV Y+ +G G +G+ + A K I+ + ++ + RE++I+
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 81
Query: 134 ---HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ G +I+ E + V++V +L +L+ +++ H + L I+
Sbjct: 82 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 138
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSA 246
+ + HS V+HRDLKP N LL + LK DFGL+ + + V +
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 247 YYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWA-------------------ES 285
+Y APE++ + Y DIWS+G +L +L P F E
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
Query: 286 EHGIFNAILRGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
+ I N R ++ PW P+ +A DL+ KML +P +R+ + LAHP
Sbjct: 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315
Query: 338 WIKEDGEAPDVPLDNA 353
++++ + D P+ A
Sbjct: 316 YLEQYYDPSDEPIAEA 331
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 136/314 (43%), Gaps = 42/314 (13%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIA--KRKLVNKEDIEDVRREVQIM 133
DV Y+ +G G +G+ + A K I+ + + + + +++ ++
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFR 83
Query: 134 H-HLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI 192
H ++ G +I+ E + V++V +L +L+ +++ H + L I++
Sbjct: 84 HENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRG 140
Query: 193 IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSAYY 248
+ HS V+HRDLKP N LL + LK DFGL+ + + V + +Y
Sbjct: 141 LKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 249 IAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWA-------------------ESEH 287
APE++ + Y DIWS+G +L +L P F E +
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 257
Query: 288 GIFNAILRGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWI 339
I N R ++ PW P+ +A DL+ KML +P +R+ + LAHP++
Sbjct: 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
Query: 340 KEDGEAPDVPLDNA 353
++ + D P+ A
Sbjct: 318 EQYYDPSDEPIAEA 331
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM-- 133
DV Y+ +G G +G+ + A K I+ + ++ + RE++I+
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 77
Query: 134 ---HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ G +I+ E + V++V +L +L+ +++ H + L I+
Sbjct: 78 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 134
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSA 246
+ + HS V+HRDLKP N LL + LK DFGL+ + + V +
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 247 YYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWA-------------------ES 285
+Y APE++ + Y DIWS+G +L +L P F E
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 286 EHGIFNAILRGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
+ I N R ++ PW P+ +A DL+ KML +P +R+ + LAHP
Sbjct: 252 LNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 338 WIKEDGEAPDVPLDNA 353
++++ + D P+ A
Sbjct: 312 YLEQYYDPSDEPIAEA 327
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM-- 133
DV Y+ +G G +G+ + A K I+ + ++ + RE++I+
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 79
Query: 134 ---HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ G +I+ E + V++V +L +L+ +++ H + L I+
Sbjct: 80 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 136
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSA 246
+ + HS V+HRDLKP N LL + LK DFGL+ + + V +
Sbjct: 137 RGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 247 YYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWA-------------------ES 285
+Y APE++ + Y DIWS+G +L +L P F E
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 253
Query: 286 EHGIFNAILRGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
+ I N R ++ PW P+ +A DL+ KML +P +R+ + LAHP
Sbjct: 254 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 313
Query: 338 WIKEDGEAPDVPLDNA 353
++++ + D P+ A
Sbjct: 314 YLEQYYDPSDEPIAEA 329
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM-- 133
DV Y+ +G G +G+ + A K I+ + ++ + RE++I+
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 97
Query: 134 ---HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ G +I+ E + V++V +L +L+ +++ H + L I+
Sbjct: 98 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 154
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSA 246
+ + HS V+HRDLKP N LL + LK DFGL+ + + V +
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 247 YYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWA-------------------ES 285
+Y APE++ + Y DIWS+G +L +L P F E
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 271
Query: 286 EHGIFNAILRGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
+ I N R ++ PW P+ +A DL+ KML +P +R+ + LAHP
Sbjct: 272 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 331
Query: 338 WIKEDGEAPDVPLDNA 353
++++ + D P+ A
Sbjct: 332 YLEQYYDPSDEPIAEA 347
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM-- 133
DV Y+ +G G +G+ + A K I+ + ++ + RE++I+
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 77
Query: 134 ---HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ G +I+ E + V++V +L +L+ +++ H + L I+
Sbjct: 78 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 134
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSA 246
+ + HS V+HRDLKP N LL + LK DFGL+ + + V +
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLL---NTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 247 YYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWA-------------------ES 285
+Y APE++ + Y DIWS+G +L +L P F E
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 286 EHGIFNAILRGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
+ I N R ++ PW P+ +A DL+ KML +P +R+ + LAHP
Sbjct: 252 LNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 338 WIKEDGEAPDVPLDNA 353
++++ + D P+ A
Sbjct: 312 YLEQYYDPSDEPIAEA 327
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM-- 133
DV Y+ +G G +G+ + A K I+ + ++ + RE++I+
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 77
Query: 134 ---HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ G +I+ E + V++V +L +L+ +++ H + L I+
Sbjct: 78 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 134
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSA 246
+ + HS V+HRDLKP N LL + LK DFGL+ + + V +
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 247 YYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWA-------------------ES 285
+Y APE++ + Y DIWS+G +L +L P F E
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 286 EHGIFNAILRGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
+ I N R ++ PW P+ +A DL+ KML +P +R+ + LAHP
Sbjct: 252 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 338 WIKEDGEAPDVPLDNA 353
++++ + D P+ A
Sbjct: 312 YLEQYYDPSDEPIAEA 327
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM-- 133
DV Y+ +G G +G+ + A K I+ + ++ + RE++I+
Sbjct: 18 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 75
Query: 134 ---HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ G +I+ E + V++V +L +L+ +++ H + L I+
Sbjct: 76 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 132
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSA 246
+ + HS V+HRDLKP N LL + LK DFGL+ + + V +
Sbjct: 133 RGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 247 YYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWA-------------------ES 285
+Y APE++ + Y DIWS+G +L +L P F E
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 249
Query: 286 EHGIFNAILRGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
+ I N R ++ PW P+ +A DL+ KML +P +R+ + LAHP
Sbjct: 250 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 309
Query: 338 WIKEDGEAPDVPLDNA 353
++++ + D P+ A
Sbjct: 310 YLEQYYDPSDEPIAEA 325
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM-- 133
DV Y+ +G G +G+ + A K I+ + ++ + RE++I+
Sbjct: 18 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 75
Query: 134 ---HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ G +I+ E + V++V +L +L+ +++ H + L I+
Sbjct: 76 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 132
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSA 246
+ + HS V+HRDLKP N LL + LK DFGL+ + + V +
Sbjct: 133 RGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 247 YYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWA-------------------ES 285
+Y APE++ + Y DIWS+G +L +L P F E
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQED 249
Query: 286 EHGIFNAILRGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
+ I N R ++ PW P+ +A DL+ KML +P +R+ + LAHP
Sbjct: 250 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 309
Query: 338 WIKEDGEAPDVPLDNA 353
++++ + D P+ A
Sbjct: 310 YLEQYYDPSDEPIAEA 325
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 141/327 (43%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 77
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 78 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 134
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+S LK DFGL+ + V
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDSELKILDFGLA--RHTDDEMTGYV 189
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 250 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 310 AHAYFAQYHDPDDEPVADPYDQSFESR 336
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 133/323 (41%), Gaps = 56/323 (17%)
Query: 73 PMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQI 132
P D + Y ++G+G FG H+ TGQ+ A K + I +R E++I
Sbjct: 12 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKI 70
Query: 133 MHHLTGQPNIVEL-------KGAYED-KQSVHLVMELC----AGGELFDRIIAKGHYTER 180
+ L + N+V L Y K S++LV + C AG L ++ K +T
Sbjct: 71 LQLLKHE-NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVK--FTLS 125
Query: 181 AAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK-----Q 235
+++ ++ ++ H ++HRD+K N L+ + LK DFGL+ + Q
Sbjct: 126 EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQ 182
Query: 236 GEVFKDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAI 293
+ + V + +Y PE+L +R YGP D+W G ++ + P +E I
Sbjct: 183 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
Query: 294 LRGHIDFTSDPWPSIS----------------------------PQAKDLVKKMLNSDPK 325
+ T + WP++ P A DL+ K+L DP
Sbjct: 243 SQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPA 302
Query: 326 QRLTATEVLAHPWIKEDGEAPDV 348
QR+ + + L H + D D+
Sbjct: 303 QRIDSDDALNHDFFWSDPMPSDL 325
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM-- 133
DV Y+ +G G +G+ + A K I+ + ++ + RE++I+
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 81
Query: 134 ---HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ G +I+ E + V++V +L +L+ +++ H + L I+
Sbjct: 82 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 138
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSA 246
+ + HS V+HRDLKP N LL + LK DFGL+ + + V +
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 247 YYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWA-------------------ES 285
+Y APE++ + Y DIWS+G +L +L P F E
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
Query: 286 EHGIFNAILRGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
+ I N R ++ PW P+ +A DL+ KML +P +R+ + LAHP
Sbjct: 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315
Query: 338 WIKEDGEAPDVPLDNA 353
++++ + D P+ A
Sbjct: 316 YLEQYYDPSDEPIAEA 331
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM-- 133
DV Y+ +G G +G+ + A K I+ + ++ + RE++I+
Sbjct: 25 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 82
Query: 134 ---HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ G +I+ E + V++V +L +L+ +++ H + L I+
Sbjct: 83 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 139
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSA 246
+ + HS V+HRDLKP N LL + LK DFGL+ + + V +
Sbjct: 140 RGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 247 YYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWA-------------------ES 285
+Y APE++ + Y DIWS+G +L +L P F E
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 256
Query: 286 EHGIFNAILRGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
+ I N R ++ PW P+ +A DL+ KML +P +R+ + LAHP
Sbjct: 257 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 316
Query: 338 WIKEDGEAPDVPLDNA 353
++++ + D P+ A
Sbjct: 317 YLEQYYDPSDEPIAEA 332
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 123/292 (42%), Gaps = 46/292 (15%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDV----RREVQIMHHLTGQP 140
+++G G +G ++ T + +A +++ +D E V RE+ ++ L +
Sbjct: 8 EKIGEGTYGTVFKAKNRETHE-----IVALKRVRLDDDDEGVPSSALREICLLKELKHK- 61
Query: 141 NIVELKGAYEDKQSVHLVMELCAGG--ELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
NIV L + + LV E C + FD G S L +++ + CHS
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVL--K 255
V+HRDLKP+N L+ + N LK DFGL+ F + V + +Y P+VL
Sbjct: 120 RNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 256 RKYGPEADIWSIGVMLYILLCGVPPFWAESE-HGIFNAILRGHIDFTSDPWPSIS----- 309
+ Y D+WS G + L P + ++ I R T + WPS++
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236
Query: 310 --------------------PQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+DL++ +L +P QR++A E L HP+ +
Sbjct: 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 133/324 (41%), Gaps = 58/324 (17%)
Query: 73 PMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIE-DVRREVQ 131
P D + Y ++G+G FG H+ TGQ+ A K + KE RE++
Sbjct: 12 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN--EKEGFPITALREIK 69
Query: 132 IMHHLTGQPNIVEL-------KGAYED-KQSVHLVMELC----AGGELFDRIIAKGHYTE 179
I+ L + N+V L Y K S++LV + C AG L ++ K +T
Sbjct: 70 ILQLLKHE-NVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAG--LLSNVLVK--FTL 124
Query: 180 RAAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK----- 234
+++ ++ ++ H ++HRD+K N L+ + LK DFGL+ +
Sbjct: 125 SEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNS 181
Query: 235 QGEVFKDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNA 292
Q + + V + +Y PE+L +R YGP D+W G ++ + P +E
Sbjct: 182 QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 241
Query: 293 ILRGHIDFTSDPWPSIS----------------------------PQAKDLVKKMLNSDP 324
I + T + WP++ P A DL+ K+L DP
Sbjct: 242 ISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDP 301
Query: 325 KQRLTATEVLAHPWIKEDGEAPDV 348
QR+ + + L H + D D+
Sbjct: 302 AQRIDSDDALNHDFFWSDPMPSDL 325
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 141/327 (43%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 73
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 74 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 130
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+S LK DFGL+ + V
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDSELKILDFGLA--RHTDDEMTGYV 185
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 246 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 306 AHAYFAQYHDPDDEPVADPYDQSFESR 332
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 135/316 (42%), Gaps = 46/316 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM-- 133
DV Y+ +G G +G+ + A K I+ + ++ + RE++I+
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLA 79
Query: 134 ---HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ G +I+ E + V++V +L +L+ +++ H + L I+
Sbjct: 80 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 136
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSA 246
+ + HS V+HRDLKP N LL + LK DFGL+ + + V +
Sbjct: 137 RGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 247 YYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWA-------------------ES 285
+Y APE++ + Y DIWS+G +L +L P F E
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 253
Query: 286 EHGIFNAILRGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
+ I N R ++ PW P+ +A DL+ KML +P +R+ + LAHP
Sbjct: 254 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 313
Query: 338 WIKEDGEAPDVPLDNA 353
++ + + D P+ A
Sbjct: 314 YLAQYYDPSDEPIAEA 329
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 46/292 (15%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDV----RREVQIMHHLTGQP 140
+++G G +G ++ T + +A +++ +D E V RE+ ++ L +
Sbjct: 8 EKIGEGTYGTVFKAKNRETHE-----IVALKRVRLDDDDEGVPSSALREICLLKELKHK- 61
Query: 141 NIVELKGAYEDKQSVHLVMELCAGG--ELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
NIV L + + LV E C + FD G S L +++ + CHS
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIAPEVL--K 255
V+HRDLKP+N L+ + N LK +FGL+ F + V + +Y P+VL
Sbjct: 120 RNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 256 RKYGPEADIWSIGVMLYILL-CGVPPFWAESEHGIFNAILRGHIDFTSDPWPSIS----- 309
+ Y D+WS G + L G P F I R T + WPS++
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236
Query: 310 --------------------PQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+DL++ +L +P QR++A E L HP+ +
Sbjct: 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 140/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMAGFV 183
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 304 AHAYFAQYHDPDDEPVADPYDQSFESR 330
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM-- 133
DV Y+ +G G +G+ + A + I+ + ++ + RE++I+
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFE--HQTYCQRTLREIKILLR 81
Query: 134 ---HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ G +I+ E + V++V +L +L+ +++ H + L I+
Sbjct: 82 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 138
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSA 246
+ + HS V+HRDLKP N LL + LK DFGL+ + + V +
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 247 YYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWA-------------------ES 285
+Y APE++ + Y DIWS+G +L +L P F E
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
Query: 286 EHGIFNAILRGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
+ I N R ++ PW P+ +A DL+ KML +P +R+ + LAHP
Sbjct: 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315
Query: 338 WIKEDGEAPDVPLDNA 353
++++ + D P+ A
Sbjct: 316 YLEQYYDPSDEPIAEA 331
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 133/324 (41%), Gaps = 58/324 (17%)
Query: 73 PMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIE-DVRREVQ 131
P D + Y ++G+G FG H+ TGQ+ A K + KE RE++
Sbjct: 11 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN--EKEGFPITALREIK 68
Query: 132 IMHHLTGQPNIVEL-------KGAYED-KQSVHLVMELC----AGGELFDRIIAKGHYTE 179
I+ L + N+V L Y K S++LV + C AG L ++ K +T
Sbjct: 69 ILQLLKHE-NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVK--FTL 123
Query: 180 RAAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK----- 234
+++ ++ ++ H ++HRD+K N L+ + LK DFGL+ +
Sbjct: 124 SEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNS 180
Query: 235 QGEVFKDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNA 292
Q + + V + +Y PE+L +R YGP D+W G ++ + P +E
Sbjct: 181 QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 240
Query: 293 ILRGHIDFTSDPWPSIS----------------------------PQAKDLVKKMLNSDP 324
I + T + WP++ P A DL+ K+L DP
Sbjct: 241 ISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDP 300
Query: 325 KQRLTATEVLAHPWIKEDGEAPDV 348
QR+ + + L H + D D+
Sbjct: 301 AQRIDSDDALNHDFFWSDPMPSDL 324
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 132/315 (41%), Gaps = 56/315 (17%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH-----H 135
Y K +G G GI + A K ++ R N+ + RE+ +M +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
+ G N+ + + E+ Q V++VMEL ++I ER + L + + I H
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLCGIKH- 141
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV-L 254
HS G+IHRDLKP N ++ ++ LK DFGL+ + V + YY APEV L
Sbjct: 142 LHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 255 KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL------------------RG 296
Y DIWS+G ++ ++ G F +N ++ R
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 297 HID-------------FTSDPWPSIS-------PQAKDLVKKMLNSDPKQRLTATEVLAH 336
+++ F +P+ S QA+DL+ KML D +R++ E L H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 337 PWIK-----EDGEAP 346
P+I + EAP
Sbjct: 319 PYINVWYDPSEAEAP 333
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 133/324 (41%), Gaps = 58/324 (17%)
Query: 73 PMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIE-DVRREVQ 131
P D + Y ++G+G FG H+ TGQ+ A K + KE RE++
Sbjct: 12 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN--EKEGFPITALREIK 69
Query: 132 IMHHLTGQPNIVEL-------KGAYED-KQSVHLVMELC----AGGELFDRIIAKGHYTE 179
I+ L + N+V L Y K S++LV + C AG L ++ K +T
Sbjct: 70 ILQLLKHE-NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVK--FTL 124
Query: 180 RAAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK----- 234
+++ ++ ++ H ++HRD+K N L+ + LK DFGL+ +
Sbjct: 125 SEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNS 181
Query: 235 QGEVFKDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNA 292
Q + + V + +Y PE+L +R YGP D+W G ++ + P +E
Sbjct: 182 QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 241
Query: 293 ILRGHIDFTSDPWPSIS----------------------------PQAKDLVKKMLNSDP 324
I + T + WP++ P A DL+ K+L DP
Sbjct: 242 ISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDP 301
Query: 325 KQRLTATEVLAHPWIKEDGEAPDV 348
QR+ + + L H + D D+
Sbjct: 302 AQRIDSDDALNHDFFWSDPMPSDL 325
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 132/315 (41%), Gaps = 56/315 (17%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH-----H 135
Y K +G G GI + A K ++ R N+ + RE+ +M +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
+ G N+ + + E+ Q V++VMEL ++I ER + L + + I H
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLCGIKH- 141
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV-L 254
HS G+IHRDLKP N ++ ++ LK DFGL+ + V + YY APEV L
Sbjct: 142 LHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 255 KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL------------------RG 296
Y DIWS+G ++ ++ G F +N ++ R
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 297 HID-------------FTSDPWPSIS-------PQAKDLVKKMLNSDPKQRLTATEVLAH 336
+++ F +P+ S QA+DL+ KML D +R++ E L H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 337 PWIK-----EDGEAP 346
P+I + EAP
Sbjct: 319 PYINVWYDPSEAEAP 333
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM-- 133
DV Y+ +G G +G+ + A K I+ + ++ + RE++I+
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 81
Query: 134 ---HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV 190
++ G +I+ E + V++V +L +L+ +++ H + L I+
Sbjct: 82 FRHENIIGINDIIR-APTIEQMKDVYIVQDLMET-DLY-KLLKCQHLSNDHICYFLYQIL 138
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVF----YKQGEVFKDIVGSA 246
+ + HS V+HRDLKP N LL + LK DFGL+ + + V +
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 247 YYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWA-------------------ES 285
+Y APE++ + Y DIWS+G +L +L P F E
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
Query: 286 EHGIFNAILRGHI----DFTSDPW----PSISPQAKDLVKKMLNSDPKQRLTATEVLAHP 337
+ I N R ++ PW P+ +A DL+ KML +P +R+ + LAHP
Sbjct: 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315
Query: 338 WIKEDGEAPDVPLDNA 353
++++ + D P+ A
Sbjct: 316 YLEQYYDPSDEPIAEA 331
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 121/307 (39%), Gaps = 68/307 (22%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR-REVQIMHHLTGQPNIV 143
++LG G + + +K TG A K + KL ++E RE+ +M L + NIV
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEV---KLDSEEGTPSTAIREISLMKELKHE-NIV 66
Query: 144 ELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLR------------TIVQ 191
L + + LV E K + R + R ++Q
Sbjct: 67 RLYDVIHTENKLTLVFEFMDND-------LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 192 IIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKDIVGSAYYIA 250
+ CH ++HRDLKP+N LL+NK LK DFGL+ F F V + +Y A
Sbjct: 120 GLAFCHENKILHRDLKPQN-LLINK--RGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRA 176
Query: 251 PEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDP---- 304
P+VL R Y DIWS G +L ++ G P F ++ I D P
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIF----DIMGTPNESL 232
Query: 305 WPSIS----------------------PQAK--------DLVKKMLNSDPKQRLTATEVL 334
WPS++ P K D + +L +P RL+A + L
Sbjct: 233 WPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQAL 292
Query: 335 AHPWIKE 341
HPW E
Sbjct: 293 HHPWFAE 299
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 141/327 (43%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 78
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 79 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 135
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTADEMTGYV 190
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D ++ SR
Sbjct: 311 AHAYFAQYHDPDDEPVADPYDQSLESR 337
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 99/220 (45%), Gaps = 20/220 (9%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQ---PNIV 143
+G G+FG K G++ +C I K + E RRE + GQ PNI+
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAI---KTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 144 ELKGAYEDKQSVHLVMELCAGGEL--FDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGV 201
L+G + V ++ E G L F R+ G +T +LR I + M
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGMLRGIASGMRYLAEMSY 137
Query: 202 IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGE---VFKDIVGSAY---YIAPEVLK 255
+HRDL N L+ + N K +DFGLS F ++ + +G + APE +
Sbjct: 138 VHRDLAARNILV---NSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 256 -RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAI 293
RK+ +D WS G++++ ++ G P+W S + NAI
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI 234
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 102/222 (45%), Gaps = 16/222 (7%)
Query: 73 PMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQI 132
P + V Y K +G+G FG Q A K + K +++ E++R I
Sbjct: 91 PHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIR----I 146
Query: 133 MHHLTGQP-----NIVELKGAYEDKQSVHLVMELCAGG--ELFDRIIAKGHYTERAAASL 185
+ HL Q N++ + + + + + EL + EL + +G ++
Sbjct: 147 LEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKF 205
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGS 245
+I+Q + H +IH DLKPEN +LL + S +K DFG S Y+ V+ I S
Sbjct: 206 AHSILQCLDALHKNRIIHCDLKPEN-ILLKQQGRSGIKVIDFGSSC-YEHQRVYXXI-QS 262
Query: 246 AYYIAPEV-LKRKYGPEADIWSIGVMLYILLCGVPPFWAESE 286
+Y APEV L +YG D+WS+G +L LL G P E E
Sbjct: 263 RFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 310 PQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAP 346
P D +K+ L DP R+T + L HPW++ P
Sbjct: 383 PLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPKP 419
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 102/222 (45%), Gaps = 16/222 (7%)
Query: 73 PMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQI 132
P + V Y K +G+G FG Q A K + K +++ E++R I
Sbjct: 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIR----I 146
Query: 133 MHHLTGQP-----NIVELKGAYEDKQSVHLVMELCAGG--ELFDRIIAKGHYTERAAASL 185
+ HL Q N++ + + + + + EL + EL + +G ++
Sbjct: 147 LEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKF 205
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGS 245
+I+Q + H +IH DLKPEN +LL + S +K DFG S Y+ V+ I S
Sbjct: 206 AHSILQCLDALHKNRIIHCDLKPEN-ILLKQQGRSGIKVIDFGSSC-YEHQRVYTXI-QS 262
Query: 246 AYYIAPEV-LKRKYGPEADIWSIGVMLYILLCGVPPFWAESE 286
+Y APEV L +YG D+WS+G +L LL G P E E
Sbjct: 263 RFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 310 PQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAP 346
P D +K+ L DP R+T + L HPW++ P
Sbjct: 383 PLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPKP 419
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 140/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQ 128
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 183
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 304 AHAYFAQYHDPDDEPVADPYDQSFESR 330
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 136/317 (42%), Gaps = 46/317 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 9 LAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 67
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 68 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCAKLTDDHVQ 124
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 179
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR------ 295
+ +Y APE++ Y DIWS+G ++ LL G F ILR
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 296 ----------------------GHIDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEV 333
++F ++ + +P A DL++KML D +R+TA +
Sbjct: 240 AELLKKISSESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298
Query: 334 LAHPWIKEDGEAPDVPL 350
LAH + + + D P+
Sbjct: 299 LAHAYFAQYHDPDDEPV 315
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 133/319 (41%), Gaps = 56/319 (17%)
Query: 77 VKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH-- 134
V Y K +G G GI + A K ++ R N+ + RE+ +M
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 80
Query: 135 ---HLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQ 191
++ G N+ + + E+ Q V++VMEL ++I ER + L + +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 138
Query: 192 IIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAP 251
I H HS G+IHRDLKP N ++ + LK DFGL+ + + V + YY AP
Sbjct: 139 IKHL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAP 194
Query: 252 EV-LKRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL---------------- 294
EV L Y DIWS+G ++ ++C F +N ++
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQP 254
Query: 295 --RGHID-------------FTSDPWPSIS-------PQAKDLVKKMLNSDPKQRLTATE 332
R +++ F +P+ S QA+DL+ KML D +R++ E
Sbjct: 255 TVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314
Query: 333 VLAHPWIK-----EDGEAP 346
L HP+I + EAP
Sbjct: 315 ALQHPYINVWYDPSEAEAP 333
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 140/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQ 128
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDXELKILDFGLA--RHTDDEMTGYV 183
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 304 AHAYFAQYHDPDDEPVADPYDQSFESR 330
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 139/328 (42%), Gaps = 50/328 (15%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMAGFV 183
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR------ 295
+ +Y APE++ Y DIWS+G ++ LL G F ILR
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 296 ----------------------GHIDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEV 333
++F ++ + +P A DL++KML D +R+TA +
Sbjct: 244 AELLKKISSESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 302
Query: 334 LAHPWIKE----DGEAPDVPLDNAVLSR 357
LAH + + D E P D + SR
Sbjct: 303 LAHAYFAQYHDPDDEPVADPYDQSFESR 330
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 70/117 (59%), Gaps = 2/117 (1%)
Query: 354 VLSRLKQFKAMNKFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAK 413
VL K + + KF+K+A+ +IA ++ ++ LK F +D D G IT E+LK+GL K
Sbjct: 21 VLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEK 80
Query: 414 QGTKLSEYEAKQLMEAADADGNGTIDYHEFITATMHLNRMDREEHLYTAFQHFDKDN 470
G KL Y L++ D+DG+G IDY EFI A + ++ + + +Y AF+ FD DN
Sbjct: 81 DGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSK-KLIYCAFRVFDVDN 135
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 391 FKSIDTDNSGTITLEELKQGL---AKQG--TKLSEYEAKQLMEAADADGNGTIDYHEF 443
F+ D DN G IT EL L K+G T+ K+++ D + +G ID+HEF
Sbjct: 128 FRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEF 185
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 102/222 (45%), Gaps = 16/222 (7%)
Query: 73 PMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQI 132
P + V Y K +G+G FG Q A K + K +++ E++R I
Sbjct: 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIR----I 146
Query: 133 MHHLTGQP-----NIVELKGAYEDKQSVHLVMELCAGG--ELFDRIIAKGHYTERAAASL 185
+ HL Q N++ + + + + + EL + EL + +G ++
Sbjct: 147 LEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKF 205
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGS 245
+I+Q + H +IH DLKPEN +LL + S +K DFG S Y+ V+ I S
Sbjct: 206 AHSILQCLDALHKNRIIHCDLKPEN-ILLKQQGRSGIKVIDFGSSC-YEHQRVYTXI-QS 262
Query: 246 AYYIAPEV-LKRKYGPEADIWSIGVMLYILLCGVPPFWAESE 286
+Y APEV L +YG D+WS+G +L LL G P E E
Sbjct: 263 RFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 310 PQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
P D +K+ L DP R+T + L HPW++
Sbjct: 383 PLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 140/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 183
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 304 AHAYFAQYHDPDDEPVADPFDQSFESR 330
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 118/266 (44%), Gaps = 21/266 (7%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
ELGRG +G+ H +GQ A K I R VN ++ + + ++ I P V
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRI--RATVNSQEQKRLLXDLDISXRTVDCPFTVTF 98
Query: 146 KGAYEDKQSVHLVMEL--CAGGELFDRIIAKGH-YTERAAASLLRTIVQIIHTCHS-MGV 201
GA + V + EL + + + ++I KG E + +IV+ + HS + V
Sbjct: 99 YGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 158
Query: 202 IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDI-VGSAYYIAPEVL-----K 255
IHRD+KP N L+ + +K DFG+S Y +V KDI G Y APE + +
Sbjct: 159 IHRDVKPSNVLI---NALGQVKXCDFGIS-GYLVDDVAKDIDAGCKPYXAPERINPELNQ 214
Query: 256 RKYGPEADIWSIGVMLYILLCGVPPF--WAESEHGIFNAILRGHIDFTSDPWPSISPQAK 313
+ Y ++DIWS+G+ L P+ W + + +D S +
Sbjct: 215 KGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD---KFSAEFV 271
Query: 314 DLVKKMLNSDPKQRLTATEVLAHPWI 339
D + L + K+R T E+ HP+
Sbjct: 272 DFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 140/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 78
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 79 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 135
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTADEMTGYV 190
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 311 AHAYFAQYHDPDDEPVADPYDQSFESR 337
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 136/317 (42%), Gaps = 46/317 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 67
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 68 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 124
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMAGFV 179
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR------ 295
+ +Y APE++ Y DIWS+G ++ LL G F ILR
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 296 ----------------------GHIDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEV 333
++F ++ + +P A DL++KML D +R+TA +
Sbjct: 240 AELLKKISSESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298
Query: 334 LAHPWIKEDGEAPDVPL 350
LAH + + + D P+
Sbjct: 299 LAHAYFAQYHDPDDEPV 315
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 131/301 (43%), Gaps = 49/301 (16%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDI--------------EDV 126
Y + L +G+F LC + + +A K K L K D +D
Sbjct: 33 YRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDF 90
Query: 127 RREVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGEL--FDR--IIAKGHYTERAA 182
+ E+QI+ + + + +G + V+++ E + FD + +YT
Sbjct: 91 KNELQIITDIKNEY-CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149
Query: 183 ASLLRTIVQIIHTCHSM-----GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGE 237
+++ I++ + S + HRD+KP N L+ D+N +K +DFG S + +
Sbjct: 150 IQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM---DKNGRVKLSDFGESEYMVDKK 206
Query: 238 VFKDIVGSAYYIAPEVLKRKY---GPEADIWSIGVMLYILLCGVPPFWAE-SEHGIFNAI 293
+ K G+ ++ PE + G + DIWS+G+ LY++ V PF + S +FN I
Sbjct: 207 I-KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNI 265
Query: 294 LRGHIDFTSDP----WP-----------SISPQAKDLVKKMLNSDPKQRLTATEVLAHPW 338
+I++ D +P +S + D +K L +P +R+T+ + L H W
Sbjct: 266 RTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEW 325
Query: 339 I 339
+
Sbjct: 326 L 326
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 137/316 (43%), Gaps = 44/316 (13%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 78
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 79 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 135
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTADEMTGYV 190
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 335 AHPWIKEDGEAPDVPL 350
AH + + + D P+
Sbjct: 311 AHAYFAQYHDPDDEPV 326
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 131/315 (41%), Gaps = 56/315 (17%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH-----H 135
Y K +G G GI + A K ++ R N+ + RE+ +M +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
+ G N+ + + E+ Q V++VMEL ++I ER + L + + I H
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLCGIKH- 141
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV-L 254
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV L
Sbjct: 142 LHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 255 KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL------------------RG 296
Y DIWS+G ++ ++ G F +N ++ R
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 297 HID-------------FTSDPWPSIS-------PQAKDLVKKMLNSDPKQRLTATEVLAH 336
+++ F +P+ S QA+DL+ KML D +R++ E L H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 337 PWIK-----EDGEAP 346
P+I + EAP
Sbjct: 319 PYINVWYDPSEAEAP 333
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 41/262 (15%)
Query: 113 AKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRII 172
KR L++ DI + E++++ PN++ + + +++ +ELC L D +
Sbjct: 62 VKRMLIDFCDIALM--EIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVE 118
Query: 173 AKGHYTERA-------AASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKD-------- 217
+K E SLLR I + HS+ +IHRDLKP+N L+
Sbjct: 119 SKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQT 178
Query: 218 --ENSPLKATDFGLSVFYKQGEV-----FKDIVGSAYYIAPEVL----KRKYGPEADIWS 266
EN + +DFGL G+ + G++ + APE+L KR+ DI+S
Sbjct: 179 GAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFS 238
Query: 267 IG-VMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP-----SISPQAKDLVKKML 320
+G V YIL G PF ++ + I+RG F+ D S+ +A DL+ +M+
Sbjct: 239 MGCVFYYILSKGKHPFG--DKYSRESNIIRGI--FSLDEMKCLHDRSLIAEATDLISQMI 294
Query: 321 NSDPKQRLTATEVLAHP--WIK 340
+ DP +R TA +VL HP W K
Sbjct: 295 DHDPLKRPTAMKVLRHPLFWPK 316
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 140/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 183
Query: 244 GSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 184 ATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 304 AHAYFAQYHDPDDEPVADPYDQSFESR 330
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 140/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 18 LNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 76
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 77 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 133
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDXELKILDFGLA--RHTDDEMTGYV 188
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 249 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 309 AHAYFAQYHDPDDEPVADPYDQSFESR 335
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 134/306 (43%), Gaps = 67/306 (21%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR----REVQIMHHLTGQPN 141
ELG G G+ +HK +G + RKL++ E +R RE+Q++H P
Sbjct: 75 ELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVLHECN-SPY 127
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAAASLLRTIVQ-IIHTCHSM 199
IV GA+ + + ME GG L D+++ K G E+ + +++ + +
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 186
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDI----VGSAYYIAPEVLK 255
++HRD+KP N L+ ++ E +K DFG+S G++ + VG+ Y++PE L+
Sbjct: 187 KIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQ 238
Query: 256 -RKYGPEADIWSIGVMLYILLCG---VPPFWAESEHGIFNAILRGH-------------- 297
Y ++DIWS+G+ L + G +PP A+ +F + G
Sbjct: 239 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 298
Query: 298 -----------------IDFTSDPWPSISPQA------KDLVKKMLNSDPKQRLTATEVL 334
+D+ + P P A +D V K L +P +R +++
Sbjct: 299 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLM 358
Query: 335 AHPWIK 340
H +IK
Sbjct: 359 VHAFIK 364
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 139/328 (42%), Gaps = 50/328 (15%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 183
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR------ 295
+ +Y APE++ Y DIWS+G ++ LL G F ILR
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 296 ----------------------GHIDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEV 333
++F ++ + +P A DL++KML D +R+TA +
Sbjct: 244 AELLKKISSESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 302
Query: 334 LAHPWIKE----DGEAPDVPLDNAVLSR 357
LAH + + D E P D + SR
Sbjct: 303 LAHAYFAQYHDPDDEPVADPYDQSFESR 330
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 140/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 36 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 94
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 95 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 151
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 152 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMXGYV 206
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 266
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 267 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 326
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 327 AHAYFAQYHDPDDEPVADPYDQSFESR 353
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 137/316 (43%), Gaps = 44/316 (13%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 183
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 335 AHPWIKEDGEAPDVPL 350
AH + + + D P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 41/262 (15%)
Query: 113 AKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRII 172
KR L++ DI + E++++ PN++ + + +++ +ELC L D +
Sbjct: 62 VKRMLIDFCDIALM--EIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVE 118
Query: 173 AKGHYTERA-------AASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKD-------- 217
+K E SLLR I + HS+ +IHRDLKP+N L+
Sbjct: 119 SKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQT 178
Query: 218 --ENSPLKATDFGLSVFYKQGEV-----FKDIVGSAYYIAPEVL----KRKYGPEADIWS 266
EN + +DFGL G+ + G++ + APE+L KR+ DI+S
Sbjct: 179 GAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFS 238
Query: 267 IG-VMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP-----SISPQAKDLVKKML 320
+G V YIL G PF ++ + I+RG F+ D S+ +A DL+ +M+
Sbjct: 239 MGCVFYYILSKGKHPFG--DKYSRESNIIRGI--FSLDEMKCLHDRSLIAEATDLISQMI 294
Query: 321 NSDPKQRLTATEVLAHP--WIK 340
+ DP +R TA +VL HP W K
Sbjct: 295 DHDPLKRPTAMKVLRHPLFWPK 316
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 137/316 (43%), Gaps = 44/316 (13%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 183
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 335 AHPWIKEDGEAPDVPL 350
AH + + + D P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 138/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 24 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 82
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G + I+ T+
Sbjct: 83 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 139
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 140 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 194
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 254
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 255 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 314
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 315 AHAYFAQYHDPDDEPVADPYDQSFESR 341
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 140/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 18 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 76
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 77 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 133
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDXELKILDFGLA--RHTDDEMTGYV 188
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 249 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 309 AHAYFAQYHDPDDEPVADPYDQSFESR 335
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 134/317 (42%), Gaps = 46/317 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 33 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 91
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G + I+ T+
Sbjct: 92 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 148
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 149 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMXGXV 203
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR------ 295
+ +Y APE++ Y DIWS+G ++ LL G F ILR
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 263
Query: 296 ----------------------GHIDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEV 333
++F ++ + +P A DL++KML D +R+TA +
Sbjct: 264 AELLKKISSESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 322
Query: 334 LAHPWIKEDGEAPDVPL 350
LAH + + + D P+
Sbjct: 323 LAHAYFAQYHDPDDEPV 339
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 137/316 (43%), Gaps = 44/316 (13%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 183
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 335 AHPWIKEDGEAPDVPL 350
AH + + + D P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 140/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 24 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 82
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 83 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 139
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 140 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDXELKILDFGLA--RHTDDEMTGYV 194
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 254
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 255 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 314
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 315 AHAYFAQYHDPDDEPVADPYDQSFESR 341
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 136/317 (42%), Gaps = 46/317 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 77
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 78 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 134
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 189
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR------ 295
+ +Y APE++ Y DIWS+G ++ LL G F ILR
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 296 ----------------------GHIDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEV 333
++F ++ + +P A DL++KML D +R+TA +
Sbjct: 250 AELLKKISSESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 308
Query: 334 LAHPWIKEDGEAPDVPL 350
LAH + + + D P+
Sbjct: 309 LAHAYFAQYHDPDDEPV 325
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 140/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 73
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 74 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 130
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 185
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 246 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 306 AHAYFAQYHDPDDEPVADPYDQSFESR 332
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 140/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 183
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 304 AHAYFAQYHDPDDEPVADPYDQSFESR 330
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 132/319 (41%), Gaps = 56/319 (17%)
Query: 77 VKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH-- 134
V Y K +G G GI + A K ++ R N+ + RE+ +M
Sbjct: 27 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 85
Query: 135 ---HLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQ 191
++ G N+ + + E+ Q V++VMEL ++I ER + L + +
Sbjct: 86 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 143
Query: 192 IIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAP 251
I H HS G+IHRDLKP N ++ + LK DFGL+ + V + YY AP
Sbjct: 144 IKHL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 199
Query: 252 EV-LKRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL---------------- 294
EV L Y D+WS+G ++ ++C F +N ++
Sbjct: 200 EVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 259
Query: 295 --RGHID-------------FTSDPWPSIS-------PQAKDLVKKMLNSDPKQRLTATE 332
R +++ F +P+ S QA+DL+ KML D +R++ E
Sbjct: 260 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 319
Query: 333 VLAHPWIK-----EDGEAP 346
L HP+I + EAP
Sbjct: 320 ALQHPYINVWYDPSEAEAP 338
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 139/328 (42%), Gaps = 50/328 (15%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 23 LNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 81
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 82 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 138
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 139 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 193
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR------ 295
+ +Y APE++ Y DIWS+G ++ LL G F ILR
Sbjct: 194 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 253
Query: 296 ----------------------GHIDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEV 333
++F ++ + +P A DL++KML D +R+TA +
Sbjct: 254 AELLKKISSESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 312
Query: 334 LAHPWIKE----DGEAPDVPLDNAVLSR 357
LAH + + D E P D + SR
Sbjct: 313 LAHAYFAQYHDPDDEPVADPYDQSFESR 340
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 137/328 (41%), Gaps = 50/328 (15%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 32 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 90
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G + I+ T+
Sbjct: 91 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 147
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 148 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 202
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR------ 295
+ +Y APE++ Y DIWS+G ++ LL G F ILR
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 262
Query: 296 ----------------------GHIDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEV 333
++F ++ + +P A DL++KML D +R+TA +
Sbjct: 263 AELLKKISSESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 321
Query: 334 LAHPWIKE----DGEAPDVPLDNAVLSR 357
LAH + + D E P D + SR
Sbjct: 322 LAHAYFAQYHDPDDEPVADPYDQSFESR 349
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 140/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 18 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 76
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 77 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 133
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 188
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 249 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 309 AHAYFAQYHDPDDEPVADPYDQSFESR 335
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 140/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 12 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 70
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 71 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 127
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 128 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 182
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 183 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 242
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 243 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 302
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 303 AHAYFAQYHDPDDEPVADPYDQSFESR 329
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 140/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 183
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 304 AHAYFAQYHDPDDEPVADPYDQSFESR 330
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 137/316 (43%), Gaps = 44/316 (13%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 78
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 79 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 135
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 190
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 335 AHPWIKEDGEAPDVPL 350
AH + + + D P+
Sbjct: 311 AHAYFAQYHDPDDEPV 326
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 138/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 25 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 83
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G + I+ T+
Sbjct: 84 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 140
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 141 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 195
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 255
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 256 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 315
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 316 AHAYFAQYHDPDDEPVADPYDQSFESR 342
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 140/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 77
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 78 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 134
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 189
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 250 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 310 AHAYFAQYHDPDDEPVADPYDQSFESR 336
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 138/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 25 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 83
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G + I+ T+
Sbjct: 84 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 140
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 141 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 195
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 255
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 256 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 315
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 316 AHAYFAQYHDPDDEPVADPYDQSFESR 342
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 140/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 73
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 74 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 130
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 185
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 246 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 306 AHAYFAQYHDPDDEPVADPYDQSFESR 332
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 137/328 (41%), Gaps = 50/328 (15%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 33 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 91
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G + I+ T+
Sbjct: 92 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 148
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 149 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 203
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR------ 295
+ +Y APE++ Y DIWS+G ++ LL G F ILR
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 263
Query: 296 ----------------------GHIDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEV 333
++F ++ + +P A DL++KML D +R+TA +
Sbjct: 264 AELLKKISSESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 322
Query: 334 LAHPWIKE----DGEAPDVPLDNAVLSR 357
LAH + + D E P D + SR
Sbjct: 323 LAHAYFAQYHDPDDEPVADPYDQSFESR 350
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 141/329 (42%), Gaps = 52/329 (15%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAK--RKLVNKEDIEDVR 127
L + + +V Y +G G +G TG + A K ++K + +++ +
Sbjct: 25 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKR---TY 81
Query: 128 REVQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERA 181
RE++++ H+ + N++ L + E+ V+LV L G + I+ T+
Sbjct: 82 RELRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDH 138
Query: 182 AASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKD 241
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ +
Sbjct: 139 VQFLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTG 193
Query: 242 IVGSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF------------------ 281
V + +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 253
Query: 282 -WAESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATE 332
AE I + R +I T P + +P A DL++KML D +R+TA +
Sbjct: 254 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 313
Query: 333 VLAHPWIKE----DGEAPDVPLDNAVLSR 357
LAH + + D E P D + SR
Sbjct: 314 ALAHAYFAQYHDPDDEPVADPYDQSFESR 342
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 136/317 (42%), Gaps = 46/317 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 67
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 68 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 124
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 179
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILR------ 295
+ +Y APE++ Y DIWS+G ++ LL G F ILR
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 296 ----------------------GHIDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEV 333
++F ++ + +P A DL++KML D +R+TA +
Sbjct: 240 AELLKKISSESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298
Query: 334 LAHPWIKEDGEAPDVPL 350
LAH + + + D P+
Sbjct: 299 LAHAYFAQYHDPDDEPV 315
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 140/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 73
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 74 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 130
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 185
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 246 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 306 AHAYFAQYHDPDDEPVADPYDQSFESR 332
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 138/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 36 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 94
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G + I+ T+
Sbjct: 95 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 151
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 152 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 206
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 266
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 267 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 326
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 327 AHAYFAQYHDPDDEPVADPYDQSFESR 353
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 132/319 (41%), Gaps = 56/319 (17%)
Query: 77 VKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH-- 134
V Y K +G G GI + A K ++ R N+ + RE+ +M
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 74
Query: 135 ---HLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQ 191
++ G N+ + + E+ Q V++VMEL ++I ER + L + +
Sbjct: 75 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 132
Query: 192 IIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAP 251
I H HS G+IHRDLKP N ++ + LK DFGL+ + V + YY AP
Sbjct: 133 IKHL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
Query: 252 EV-LKRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL---------------- 294
EV L Y D+WS+G ++ ++C F +N ++
Sbjct: 189 EVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 248
Query: 295 --RGHID-------------FTSDPWPSIS-------PQAKDLVKKMLNSDPKQRLTATE 332
R +++ F +P+ S QA+DL+ KML D +R++ E
Sbjct: 249 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 308
Query: 333 VLAHPWIK-----EDGEAP 346
L HP+I + EAP
Sbjct: 309 ALQHPYINVWYDPSEAEAP 327
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 137/316 (43%), Gaps = 44/316 (13%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 18 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 76
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 77 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 133
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 188
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 249 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 335 AHPWIKEDGEAPDVPL 350
AH + + + D P+
Sbjct: 309 AHAYFAQYHDPDDEPV 324
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 138/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 32 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 90
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G + I+ T+
Sbjct: 91 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 147
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 148 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 202
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 262
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 263 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 322
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 323 AHAYFAQYHDPDDEPVADPYDQSFESR 349
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 137/316 (43%), Gaps = 44/316 (13%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGXV 183
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 335 AHPWIKEDGEAPDVPL 350
AH + + + D P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 137/316 (43%), Gaps = 44/316 (13%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 183
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 335 AHPWIKEDGEAPDVPL 350
AH + + + D P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 138/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 33 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 91
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G + I+ T+
Sbjct: 92 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 148
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 149 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 203
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 263
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 264 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 323
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 324 AHAYFAQYHDPDDEPVADPYDQSFESR 350
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 20/220 (9%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQ---PNIV 143
+G G+FG K G++ +C I K + E RRE + GQ PNI+
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAI---KTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 144 ELKGAYEDKQSVHLVMELCAGGEL--FDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGV 201
L+G + V ++ E G L F R+ G +T +LR I + M
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGMLRGIASGMRYLAEMSY 139
Query: 202 IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGS------AYYIAPEVLK 255
+HRDL N L+ + N K +DFGLS F ++ S + APE +
Sbjct: 140 VHRDLAARNILV---NSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 256 -RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAI 293
RK+ +D WS G++++ ++ G P+W S + NAI
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI 236
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 137/316 (43%), Gaps = 44/316 (13%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 11 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 69
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 70 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 126
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 127 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 181
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 241
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 242 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 301
Query: 335 AHPWIKEDGEAPDVPL 350
AH + + + D P+
Sbjct: 302 AHAYFAQYHDPDDEPV 317
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 137/316 (43%), Gaps = 44/316 (13%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 10 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 68
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 69 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 125
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 126 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 180
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 240
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 241 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 300
Query: 335 AHPWIKEDGEAPDVPL 350
AH + + + D P+
Sbjct: 301 AHAYFAQYHDPDDEPV 316
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 137/316 (43%), Gaps = 44/316 (13%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 10 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 68
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 69 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 125
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 126 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 180
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 240
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 241 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 300
Query: 335 AHPWIKEDGEAPDVPL 350
AH + + + D P+
Sbjct: 301 AHAYFAQYHDPDDEPV 316
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 137/316 (43%), Gaps = 44/316 (13%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 77
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 78 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 134
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 189
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 250 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 335 AHPWIKEDGEAPDVPL 350
AH + + + D P+
Sbjct: 310 AHAYFAQYHDPDDEPV 325
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 137/316 (43%), Gaps = 44/316 (13%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 67
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 68 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 124
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DFGL+ + V
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYV 179
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 240 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 335 AHPWIKEDGEAPDVPL 350
AH + + + D P+
Sbjct: 300 AHAYFAQYHDPDDEPV 315
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 133/319 (41%), Gaps = 56/319 (17%)
Query: 77 VKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH-- 134
V Y K +G G GI + A K ++ R N+ + RE+ +M
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV 80
Query: 135 ---HLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQ 191
++ G N+ + + E+ Q V++VMEL ++I ER + L + +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 138
Query: 192 IIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAP 251
I H HS G+IHRDLKP N ++ + LK DFGL+ + + V + YY AP
Sbjct: 139 IKHL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAP 194
Query: 252 EV-LKRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL---------------- 294
EV L Y D+WS+G ++ ++C F +N ++
Sbjct: 195 EVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 295 --RGHID-------------FTSDPWPSIS-------PQAKDLVKKMLNSDPKQRLTATE 332
R +++ F +P+ S QA+DL+ KML D +R++ E
Sbjct: 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314
Query: 333 VLAHPWIK-----EDGEAP 346
L HP+I + EAP
Sbjct: 315 ALQHPYINVWYDPSEAEAP 333
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 131/315 (41%), Gaps = 56/315 (17%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH-----H 135
Y K +G G GI + A K ++ R N+ + RE+ +M +
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 86
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
+ G N+ + + E+ Q V++VMEL ++I ER + L + + I H
Sbjct: 87 IIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKH- 143
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV-L 254
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV L
Sbjct: 144 LHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVIL 200
Query: 255 KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL------------------RG 296
Y DIWS+G ++ ++ G F +N ++ R
Sbjct: 201 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 260
Query: 297 HID-------------FTSDPWPSIS-------PQAKDLVKKMLNSDPKQRLTATEVLAH 336
+++ F +P+ S QA+DL+ KML D +R++ E L H
Sbjct: 261 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 320
Query: 337 PWIK-----EDGEAP 346
P+I + EAP
Sbjct: 321 PYINVWYDPSEAEAP 335
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 125/284 (44%), Gaps = 41/284 (14%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQ------- 139
LG+G FG + + +A K I +E + + EV ++ L Q
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 140 -----PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTER-AAASLLRTIVQII 193
N V+ A + K ++ + ME C L+D I ++ +R L R I++ +
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 194 HTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFK------------ 240
HS G+IHRDLKP N + DE+ +K DFGL+ ++ ++ K
Sbjct: 130 SYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 241 --DIVGSAYYIAPEVLKRK--YGPEADIWSIGVMLYILLCGVPPFWAESEH-GIFNAILR 295
+G+A Y+A EVL Y + D++S+G++ + ++ PF E I +
Sbjct: 187 LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRS 243
Query: 296 GHIDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWI 339
I+F D + K +++ +++ DP +R A +L W+
Sbjct: 244 VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 131/315 (41%), Gaps = 56/315 (17%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH-----H 135
Y K +G G GI + A K ++ R N+ + RE+ +M +
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
+ G N+ + + E+ Q V++VMEL ++I ER + L + + I H
Sbjct: 86 IIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL 143
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV-L 254
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV L
Sbjct: 144 -HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 255 KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL------------------RG 296
Y DIWS+G ++ ++ G F +N ++ R
Sbjct: 200 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 259
Query: 297 HID-------------FTSDPWPSIS-------PQAKDLVKKMLNSDPKQRLTATEVLAH 336
+++ F +P+ S QA+DL+ KML D +R++ E L H
Sbjct: 260 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319
Query: 337 PWIK-----EDGEAP 346
P+I + EAP
Sbjct: 320 PYINVWYDPSEAEAP 334
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 131/315 (41%), Gaps = 56/315 (17%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH-----H 135
Y K +G G GI + A K ++ R N+ + RE+ +M +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
+ G N+ + + E+ Q V++VMEL ++I ER + L + + I H
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKH- 141
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV-L 254
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV L
Sbjct: 142 LHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 255 KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL------------------RG 296
Y DIWS+G ++ ++ G F +N ++ R
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 297 HID-------------FTSDPWPSIS-------PQAKDLVKKMLNSDPKQRLTATEVLAH 336
+++ F +P+ S QA+DL+ KML D +R++ E L H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 337 PWIK-----EDGEAP 346
P+I + EAP
Sbjct: 319 PYINVWYDPSEAEAP 333
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 131/315 (41%), Gaps = 56/315 (17%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH-----H 135
Y K +G G GI + A K ++ R N+ + RE+ +M +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
+ G N+ + + E+ Q V++VMEL ++I ER + L + + I H
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV-L 254
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV L
Sbjct: 143 -HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 255 KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL------------------RG 296
Y DIWS+G ++ ++ G F +N ++ R
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 258
Query: 297 HID-------------FTSDPWPSIS-------PQAKDLVKKMLNSDPKQRLTATEVLAH 336
+++ F +P+ S QA+DL+ KML D +R++ E L H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 337 PWIK-----EDGEAP 346
P+I + EAP
Sbjct: 319 PYINVWYDPSEAEAP 333
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 140/314 (44%), Gaps = 68/314 (21%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR----REVQIMHHLTGQPN 141
ELG G G+ +HK +G + RKL++ E +R RE+Q++H P
Sbjct: 40 ELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVLHE-CNSPY 92
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAAASLLRTIVQ-IIHTCHSM 199
IV GA+ + + ME GG L D+++ K G E+ + +++ + +
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 151
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDI----VGSAYYIAPEVLK 255
++HRD+KP N L+ ++ E +K DFG+S G++ + VG+ Y++PE L+
Sbjct: 152 KIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQ 203
Query: 256 -RKYGPEADIWSIGVMLYILLCG---VPPFWAESEHGIFNAILRGH-------------- 297
Y ++DIWS+G+ L + G +PP A+ +F + G
Sbjct: 204 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 263
Query: 298 -----------------IDF-TSDPWPSI-----SPQAKDLVKKMLNSDPKQRLTATEVL 334
+D+ ++P P + S + +D V K L +P +R +++
Sbjct: 264 LNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 323
Query: 335 AHPWIKE-DGEAPD 347
H +IK D E D
Sbjct: 324 VHAFIKRSDAEEVD 337
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 70/122 (57%)
Query: 348 VPLDNAVLSRLKQFKAMNKFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEEL 407
V L + +L LK FK N+ KK+AL +IA L + EI L+ +F ++D DNSGT++ +E+
Sbjct: 20 VELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEI 79
Query: 408 KQGLAKQGTKLSEYEAKQLMEAADADGNGTIDYHEFITATMHLNRMDREEHLYTAFQHFD 467
GL K G + + Q++ D++ +G I Y +F+ AT+ ++E F+ FD
Sbjct: 80 LDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFD 139
Query: 468 KD 469
D
Sbjct: 140 ID 141
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 126/328 (38%), Gaps = 72/328 (21%)
Query: 77 VKATYSFGKELGRGQFGITHLCT-HKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHH 135
+ A Y LG G FG C HK G+ A K + K V++ E R E+Q++ H
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIV---KNVDRY-CEAARSEIQVLEH 67
Query: 136 L-TGQPN----IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERA--AASLLRT 188
L T PN V++ +E + +V EL G +D I G R +
Sbjct: 68 LNTTDPNSTFRCVQMLEWFEHHGHICIVFEL-LGLSTYDFIKENGFLPFRLDHIRKMAYQ 126
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDE----------------NSPLKATDFGLSVF 232
I + ++ HS + H DLKPEN L + D N +K DFG + +
Sbjct: 127 ICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY 186
Query: 233 YKQGEVFKDIVGSAYYIAPEV-LKRKYGPEADIWSIGVML--YILLCGVPPFWAESEH-G 288
E +V + +Y APEV L + D+WSIG +L Y L V P EH
Sbjct: 187 --DDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA 244
Query: 289 IFNAIL-------------RGHIDFTSDPWPSISPQAK---------------------- 313
+ IL R + W S +
Sbjct: 245 MMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHER 304
Query: 314 --DLVKKMLNSDPKQRLTATEVLAHPWI 339
DL++KML DP +R+T E L HP+
Sbjct: 305 LFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 140/314 (44%), Gaps = 68/314 (21%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR----REVQIMHHLTGQPN 141
ELG G G+ +HK +G + RKL++ E +R RE+Q++H P
Sbjct: 13 ELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVLHE-CNSPY 65
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAAASLLRTIVQ-IIHTCHSM 199
IV GA+ + + ME GG L D+++ K G E+ + +++ + +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDI----VGSAYYIAPEVLK 255
++HRD+KP N L+ ++ E +K DFG+S G++ + VG+ Y++PE L+
Sbjct: 125 KIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQ 176
Query: 256 -RKYGPEADIWSIGVMLYILLCG---VPPFWAESEHGIFNAILRGH-------------- 297
Y ++DIWS+G+ L + G +PP A+ +F + G
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 236
Query: 298 -----------------IDF-TSDPWPSI-----SPQAKDLVKKMLNSDPKQRLTATEVL 334
+D+ ++P P + S + +D V K L +P +R +++
Sbjct: 237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296
Query: 335 AHPWIKE-DGEAPD 347
H +IK D E D
Sbjct: 297 VHAFIKRSDAEEVD 310
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 140/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK D+GL+ + V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDYGLA--RHTDDEMTGYV 183
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 304 AHAYFAQYHDPDDEPVADPYDQSFESR 330
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 121/256 (47%), Gaps = 24/256 (9%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
+GRG FG+ +C K + A K I K I ++R+ ++ H PNIV+L
Sbjct: 17 VGRGAFGV--VCKAKWRAKDVAIKQIESES-ERKAFIVELRQLSRVNH-----PNIVKLY 68
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAK---GHYTERAAASLLRTIVQIIHTCHSM---G 200
GA + V LVME GG L++ + +YT A S Q + HSM
Sbjct: 69 GACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
+IHRDLKP N LL+ + LK DFG + + + GSA ++APEV + Y
Sbjct: 127 LIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQTH--MTNNKGSAAWMAPEVFEGSNYS 182
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQA-KDLVKK 318
+ D++S G++L+ ++ PF + G I+ + T P P+ + L+ +
Sbjct: 183 EKCDVFSWGIILWEVITRRKPF--DEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTR 240
Query: 319 MLNSDPKQRLTATEVL 334
+ DP QR + E++
Sbjct: 241 CWSKDPSQRPSMEEIV 256
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 121/256 (47%), Gaps = 24/256 (9%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
+GRG FG+ +C K + A K I K I ++R+ ++ H PNIV+L
Sbjct: 16 VGRGAFGV--VCKAKWRAKDVAIKQIESES-ERKAFIVELRQLSRVNH-----PNIVKLY 67
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAK---GHYTERAAASLLRTIVQIIHTCHSM---G 200
GA + V LVME GG L++ + +YT A S Q + HSM
Sbjct: 68 GACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK-RKYG 259
+IHRDLKP N LL+ + LK DFG + + + GSA ++APEV + Y
Sbjct: 126 LIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQTH--MTNNKGSAAWMAPEVFEGSNYS 181
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQA-KDLVKK 318
+ D++S G++L+ ++ PF E F + H + T P P+ + L+ +
Sbjct: 182 EKCDVFSWGIILWEVITRRKPF-DEIGGPAFRIMWAVH-NGTRPPLIKNLPKPIESLMTR 239
Query: 319 MLNSDPKQRLTATEVL 334
+ DP QR + E++
Sbjct: 240 CWSKDPSQRPSMEEIV 255
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 140/314 (44%), Gaps = 68/314 (21%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR----REVQIMHHLTGQPN 141
ELG G G+ +HK +G + RKL++ E +R RE+Q++H P
Sbjct: 13 ELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVLHE-CNSPY 65
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAAASLLRTIVQ-IIHTCHSM 199
IV GA+ + + ME GG L D+++ K G E+ + +++ + +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDI----VGSAYYIAPEVLK 255
++HRD+KP N L+ ++ E +K DFG+S G++ + VG+ Y++PE L+
Sbjct: 125 KIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQ 176
Query: 256 -RKYGPEADIWSIGVMLYILLCG---VPPFWAESEHGIFNAILRGH-------------- 297
Y ++DIWS+G+ L + G +PP A+ +F + G
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 236
Query: 298 -----------------IDF-TSDPWPSI-----SPQAKDLVKKMLNSDPKQRLTATEVL 334
+D+ ++P P + S + +D V K L +P +R +++
Sbjct: 237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296
Query: 335 AHPWIKE-DGEAPD 347
H +IK D E D
Sbjct: 297 VHAFIKRSDAEEVD 310
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 140/314 (44%), Gaps = 68/314 (21%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR----REVQIMHHLTGQPN 141
ELG G G+ +HK +G + RKL++ E +R RE+Q++H P
Sbjct: 13 ELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVLHE-CNSPY 65
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAAASLLRTIVQ-IIHTCHSM 199
IV GA+ + + ME GG L D+++ K G E+ + +++ + +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDI----VGSAYYIAPEVLK 255
++HRD+KP N L+ ++ E +K DFG+S G++ + VG+ Y++PE L+
Sbjct: 125 KIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQ 176
Query: 256 -RKYGPEADIWSIGVMLYILLCG---VPPFWAESEHGIFNAILRGH-------------- 297
Y ++DIWS+G+ L + G +PP A+ +F + G
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 236
Query: 298 -----------------IDF-TSDPWPSI-----SPQAKDLVKKMLNSDPKQRLTATEVL 334
+D+ ++P P + S + +D V K L +P +R +++
Sbjct: 237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296
Query: 335 AHPWIKE-DGEAPD 347
H +IK D E D
Sbjct: 297 VHAFIKRSDAEEVD 310
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 115/271 (42%), Gaps = 26/271 (9%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y G+ LG G HL + A K + + RRE Q L P
Sbjct: 31 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HP 89
Query: 141 NIVELKGAYEDKQSV----HLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
IV + E + ++VME G L D + +G T + A ++ Q ++
Sbjct: 90 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 149
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFKD---IVGSAYYIAPE 252
H G+IHRD+KP N ++ + +K DFG++ G ++G+A Y++PE
Sbjct: 150 HQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 206
Query: 253 VLK-RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP----- 306
+ +D++S+G +LY +L G PPF +S + +R DP P
Sbjct: 207 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIPPSARH 260
Query: 307 -SISPQAKDLVKKMLNSDPKQRL-TATEVLA 335
+S +V K L +P+ R TA E+ A
Sbjct: 261 EGLSADLDAVVLKALAKNPENRYQTAAEMRA 291
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 122/266 (45%), Gaps = 45/266 (16%)
Query: 113 AKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRII 172
KR L++ DI + E++++ PN++ + + +++ +ELC L D +
Sbjct: 44 VKRMLIDFCDIALM--EIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVE 100
Query: 173 AKGHYTERA-------AASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKD-------- 217
+K E SLLR I + HS+ +IHRDLKP+N L+
Sbjct: 101 SKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQT 160
Query: 218 --ENSPLKATDFGLSVFYKQGEV-----FKDIVGSAYYIAPEVL--------KRKYGPEA 262
EN + +DFGL G+ + G++ + APE+L KR+
Sbjct: 161 GAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSI 220
Query: 263 DIWSIG-VMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP-----SISPQAKDLV 316
DI+S+G V YIL G PF + + I+RG F+ D S+ +A DL+
Sbjct: 221 DIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGI--FSLDEMKCLHDRSLIAEATDLI 276
Query: 317 KKMLNSDPKQRLTATEVLAHP--WIK 340
+M++ DP +R TA +VL HP W K
Sbjct: 277 SQMIDHDPLKRPTAMKVLRHPLFWPK 302
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 123/266 (46%), Gaps = 45/266 (16%)
Query: 113 AKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRII 172
KR L++ DI + E++++ PN++ + + +++ +ELC L D +
Sbjct: 44 VKRMLIDFCDIALM--EIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVE 100
Query: 173 AKGHYTERA-------AASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKD-------- 217
+K E SLLR I + HS+ +IHRDLKP+N L+
Sbjct: 101 SKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQT 160
Query: 218 --ENSPLKATDFGLSVFYKQGEV-----FKDIVGSAYYIAPEVL--------KRKYGPEA 262
EN + +DFGL G+ + G++ + APE+L KR+
Sbjct: 161 GAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSI 220
Query: 263 DIWSIG-VMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWP-----SISPQAKDLV 316
DI+S+G V YIL G PF ++ + I+RG F+ D S+ +A DL+
Sbjct: 221 DIFSMGCVFYYILSKGKHPFG--DKYSRESNIIRGI--FSLDEMKCLHDRSLIAEATDLI 276
Query: 317 KKMLNSDPKQRLTATEVLAHP--WIK 340
+M++ DP +R TA +VL HP W K
Sbjct: 277 SQMIDHDPLKRPTAMKVLRHPLFWPK 302
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 140/314 (44%), Gaps = 68/314 (21%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR----REVQIMHHLTGQPN 141
ELG G G+ +HK +G + RKL++ E +R RE+Q++H P
Sbjct: 13 ELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVLHECN-SPY 65
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAAASLLRTIVQ-IIHTCHSM 199
IV GA+ + + ME GG L D+++ K G E+ + +++ + +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDI----VGSAYYIAPEVLK 255
++HRD+KP N L+ ++ E +K DFG+S G++ + VG+ Y++PE L+
Sbjct: 125 KIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQ 176
Query: 256 -RKYGPEADIWSIGVMLYILLCG---VPPFWAESEHGIFNAILRGH-------------- 297
Y ++DIWS+G+ L + G +PP A+ +F + G
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 236
Query: 298 -----------------IDF-TSDPWPSI-----SPQAKDLVKKMLNSDPKQRLTATEVL 334
+D+ ++P P + S + +D V K L +P +R +++
Sbjct: 237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296
Query: 335 AHPWIKE-DGEAPD 347
H +IK D E D
Sbjct: 297 VHAFIKRSDAEEVD 310
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 137/327 (41%), Gaps = 64/327 (19%)
Query: 74 MEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAK-RKLVNKE-DIEDVRREVQ 131
+E YS GK LG G FGI +G++FA K + + + N+E DI V V
Sbjct: 2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVN 61
Query: 132 IM-----------------------HHLTGQPNIVE------LKGAYEDKQSVHLVMELC 162
I+ + L G+ N V + ++K ++++ME
Sbjct: 62 IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKY-LNVIMEYV 120
Query: 163 AGG--ELFDRIIAKGHYTERAAASL-LRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDEN 219
++ I G S+ + + + + HS+G+ HRD+KP+N L+ +KD
Sbjct: 121 PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNT 180
Query: 220 SPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCG 277
LK DFG + E + S +Y APE++ +Y P D+WSIG + L+ G
Sbjct: 181 --LKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILG 238
Query: 278 VPPFWAESEHGIFNAI------------LRGHIDFT--------SDPWPSISPQ-----A 312
P F E+ I +R + +T + W I P+ A
Sbjct: 239 KPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLA 298
Query: 313 KDLVKKMLNSDPKQRLTATEVLAHPWI 339
DL++++L +P R+ E +AHP+
Sbjct: 299 IDLLEQILRYEPDLRINPYEAMAHPFF 325
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 129/294 (43%), Gaps = 51/294 (17%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKE-DIEDVRREVQIMHHLTGQPNIVEL 145
LGRG FG+ +K +A K I +L N+E E V REV+ + L P IV
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRI---RLPNRELAREKVMREVKALAKLE-HPGIVRY 68
Query: 146 KGAYEDKQS------------VHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI- 192
A+ +K + +++ M+LC L D + + ER + L +QI
Sbjct: 69 FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128
Query: 193 --IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDI-------- 242
+ HS G++HRDLKP N D +K DFGL Q E + +
Sbjct: 129 EAVEFLHSKGLMHRDLKPSNIFFTMDDV---VKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 243 -----VGSAYYIAPEVLK-RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRG 296
VG+ Y++PE + Y + DI+S+G++L+ LL PF + E +R
Sbjct: 186 RHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER------VRT 236
Query: 297 HIDFTSDPWPSISPQAKD----LVKKMLNSDPKQRLTATEVLAHPWIKEDGEAP 346
D + +P + Q +V+ ML+ P +R A ++ + + ED + P
Sbjct: 237 LTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENA-VFEDLDFP 289
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 131/315 (41%), Gaps = 56/315 (17%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMH-----H 135
Y K +G G GI + A K ++ R N+ + RE+ +M +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 136 LTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
+ G N+ + + E+ Q V++VMEL ++I ER + L + + I H
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIKH- 141
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV-L 254
HS G+IHRDLKP N ++ + LK DFGL+ + V + YY APEV L
Sbjct: 142 LHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVIL 198
Query: 255 KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL------------------RG 296
Y DIWS+G ++ ++ G F +N ++ R
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 258
Query: 297 HID-------------FTSDPWPSIS-------PQAKDLVKKMLNSDPKQRLTATEVLAH 336
+++ F +P+ S QA+DL+ KML D +R++ E L H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 337 PWIK-----EDGEAP 346
P+I + EAP
Sbjct: 319 PYINVWYDPSEAEAP 333
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 105/243 (43%), Gaps = 31/243 (12%)
Query: 78 KATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDI------------ED 125
+A + F KEL I + G G+ F + KL K D+ E
Sbjct: 31 RAVHQFAKELDASCIKIERVI---GAGE-FGEVCSGRLKLPGKRDVAVAIKTLKVGYTEK 86
Query: 126 VRREVQIMHHLTGQ---PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTER 180
RR+ + GQ PN+V L+G + V +V+E G L D + K G +T
Sbjct: 87 QRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVI 145
Query: 181 AAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVF 239
+LR I + MG +HRDL N L+ + N K +DFGLS V E
Sbjct: 146 QLVGMLRGIAAGMRYLADMGYVHRDLAARNILV---NSNLVCKVSDFGLSRVIEDDPEAV 202
Query: 240 KDIVGS---AYYIAPEVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAIL 294
G + APE ++ RK+ +D+WS G++++ ++ G P+W S + AI
Sbjct: 203 YTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE 262
Query: 295 RGH 297
G+
Sbjct: 263 EGY 265
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 130/306 (42%), Gaps = 56/306 (18%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAK--RKLVNKEDIEDVRREVQIMHHLTGQPNI 142
+ +G G +G Q+ A K +++ + L++ RE++++ HL + N+
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARR---TYRELRLLKHLKHE-NV 89
Query: 143 VELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
+ L + ED V+LV L G + I+ ++ L+ +++ +
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQALSDEHVQFLVYQLLRGLKYI 147
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKR 256
HS G+IHRDLKP N + +E+S L+ DFGL+ + E V + +Y APE++
Sbjct: 148 HSAGIIHRDLKPSNVAV---NEDSELRILDFGLA--RQADEEMTGYVATRWYRAPEIMLN 202
Query: 257 --KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSI------ 308
Y DIWS+G ++ LL G F + L+ ++ P P +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLQGKALFPGSD----YIDQLKRIMEVVGTPSPEVLAKISS 258
Query: 309 -------------------------SPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDG 343
+P A DL+ +ML D QR++A E LAH + +
Sbjct: 259 EHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYH 318
Query: 344 EAPDVP 349
+ D P
Sbjct: 319 DPEDEP 324
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 38/258 (14%)
Query: 111 TIAKRKLVNKEDIEDVR----------REVQIMHHLTGQPNIVELKGAYEDKQSVHLVME 160
TI R + + D+ R REVQ++ PN++ +D+Q ++ +E
Sbjct: 39 TIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98
Query: 161 LCAGGELFDRIIAK--GHYTERAAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDE 218
LCA L + + K H L +T + H HS+ ++HRDLKP N L+ +
Sbjct: 99 LCAA-TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHL-HSLNIVHRDLKPHNILISMPNA 156
Query: 219 NSPLKA--TDFG----LSVFYKQGEVFKDIVGSAYYIAPEVLKR--KYGP--EADIWSIG 268
+ +KA +DFG L+V + G+ +IAPE+L K P DI+S G
Sbjct: 157 HGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAG 216
Query: 269 VMLYILLCGVPPFWAESEHGIFNAILR-GHIDFTSDPWPSISPQ------AKDLVKKMLN 321
+ Y ++ +E H ++ R +I + + P+ A++L++KM+
Sbjct: 217 CVFYYVI-------SEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIA 269
Query: 322 SDPKQRLTATEVLAHPWI 339
DP++R +A VL HP+
Sbjct: 270 MDPQKRPSAKHVLKHPFF 287
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 139/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK DF L+ + V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFYLA--RHTDDEMTGYV 183
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 304 AHAYFAQYHDPDDEPVADPYDQSFESR 330
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 131/305 (42%), Gaps = 44/305 (14%)
Query: 79 ATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKED---IEDVRREVQIMHH 135
+ Y E+G G +G + +G A K++ ++ N E+ I VR EV ++
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVR-EVALLRR 59
Query: 136 LTG--QPNIVELKGAYEDKQS-----VHLVMELCAGG--ELFDRIIAKGHYTERAAASLL 186
L PN+V L ++ V LV E D+ G E L+
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLM 118
Query: 187 RTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSA 246
R ++ + H+ ++HRDLKPEN L+ + +K DFGL+ Y +V +
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALDPVVVTL 175
Query: 247 YYIAPEV-LKRKYGPEADIWSIGVMLYILLCGVPPFWAESEHG----IFNAI-LRGHIDF 300
+Y APEV L+ Y D+WS+G + + P F SE IF+ I L D+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 235
Query: 301 TSD--------------PWPSISPQAKD----LVKKMLNSDPKQRLTATEVLAHPWIKED 342
D P S+ P+ ++ L+ +ML +P +R++A L H ++ +D
Sbjct: 236 PRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 295
Query: 343 GEAPD 347
P+
Sbjct: 296 EGNPE 300
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 131/305 (42%), Gaps = 44/305 (14%)
Query: 79 ATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKED---IEDVRREVQIMHH 135
+ Y E+G G +G + +G A K++ ++ N E+ I VR EV ++
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVR-EVALLRR 59
Query: 136 LTG--QPNIVELKGAYEDKQS-----VHLVMELCAGG--ELFDRIIAKGHYTERAAASLL 186
L PN+V L ++ V LV E D+ G E L+
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLM 118
Query: 187 RTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSA 246
R ++ + H+ ++HRDLKPEN L+ + +K DFGL+ Y +V +
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALAPVVVTL 175
Query: 247 YYIAPEV-LKRKYGPEADIWSIGVMLYILLCGVPPFWAESEHG----IFNAI-LRGHIDF 300
+Y APEV L+ Y D+WS+G + + P F SE IF+ I L D+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 235
Query: 301 TSD--------------PWPSISPQAKD----LVKKMLNSDPKQRLTATEVLAHPWIKED 342
D P S+ P+ ++ L+ +ML +P +R++A L H ++ +D
Sbjct: 236 PRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 295
Query: 343 GEAPD 347
P+
Sbjct: 296 EGNPE 300
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 125/328 (38%), Gaps = 72/328 (21%)
Query: 77 VKATYSFGKELGRGQFGITHLCT-HKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHH 135
+ A Y LG G FG C HK G+ A K + K V++ E R E+Q++ H
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIV---KNVDRY-CEAARSEIQVLEH 67
Query: 136 L-TGQPN----IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERA--AASLLRT 188
L T PN V++ +E + +V EL G +D I G R +
Sbjct: 68 LNTTDPNSTFRCVQMLEWFEHHGHICIVFEL-LGLSTYDFIKENGFLPFRLDHIRKMAYQ 126
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDE----------------NSPLKATDFGLSVF 232
I + ++ HS + H DLKPEN L + D N +K DFG + +
Sbjct: 127 ICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY 186
Query: 233 YKQGEVFKDIVGSAYYIAPEV-LKRKYGPEADIWSIGVML--YILLCGVPPFWAESEH-G 288
E +V +Y APEV L + D+WSIG +L Y L V P EH
Sbjct: 187 --DDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA 244
Query: 289 IFNAIL-------------RGHIDFTSDPWPSISPQAK---------------------- 313
+ IL R + W S +
Sbjct: 245 MMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHER 304
Query: 314 --DLVKKMLNSDPKQRLTATEVLAHPWI 339
DL++KML DP +R+T E L HP+
Sbjct: 305 LFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 127/304 (41%), Gaps = 52/304 (17%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
+ +G G +G Q+ A K ++ R + RE++++ HL + N++
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLS-RPFQSLIHARRTYRELRLLKHLKHE-NVIG 91
Query: 145 LKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
L + ED V+LV L G + I+ ++ L+ +++ + HS
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKR-- 256
G+IHRDLKP N + +E+S L+ DFGL+ + E V + +Y APE++
Sbjct: 150 AGIIHRDLKPSNVAV---NEDSELRILDFGLA--RQADEEMTGYVATRWYRAPEIMLNWM 204
Query: 257 KYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSI-------- 308
Y DIWS+G ++ LL G F + L+ ++ P P +
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGKALFPGSD----YIDQLKRIMEVVGTPSPEVLAKISSEH 260
Query: 309 -----------------------SPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEA 345
+P A DL+ +ML D QR++A E LAH + + +
Sbjct: 261 ARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDP 320
Query: 346 PDVP 349
D P
Sbjct: 321 EDEP 324
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 98/212 (46%), Gaps = 31/212 (14%)
Query: 84 GKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDI------EDVRREVQIMHHLT 137
G ++G G FG+ + KG T+A +KL DI + +E+++M
Sbjct: 36 GNKMGEGGFGVVY----KGYVNN---TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88
Query: 138 GQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIA-------KGHYTERAAASLLRTIV 190
+ N+VEL G D + LV G L DR+ H + A I
Sbjct: 89 HE-NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI- 146
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGL---SVFYKQGEVFKDIVGSAY 247
+H H IHRD+K N LL DE K +DFGL S + Q + IVG+
Sbjct: 147 NFLHENHH---IHRDIKSANILL---DEAFTAKISDFGLARASEKFAQTVMXSRIVGTTA 200
Query: 248 YIAPEVLKRKYGPEADIWSIGVMLYILLCGVP 279
Y+APE L+ + P++DI+S GV+L ++ G+P
Sbjct: 201 YMAPEALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 121/298 (40%), Gaps = 45/298 (15%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG-- 138
Y E+G G +G G +F + + + REV ++ HL
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 139 QPNIVEL----KGAYEDKQS-VHLVMELCAGG--ELFDRIIAKGHYTERAAASLLRTIVQ 191
PN+V L + D+++ + LV E D++ G TE ++ +++
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE-TIKDMMFQLLR 131
Query: 192 IIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAP 251
+ HS V+HRDLKP+N L+ + + +K DFGL+ Y +V + +Y AP
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 252 EV-LKRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDP----WP 306
EV L+ Y D+WS+G + + P F S+ IL D P WP
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL----DVIGLPGEEDWP 244
Query: 307 -----------------------SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
I KDL+ K L +P +R++A L+HP+ ++
Sbjct: 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 98/212 (46%), Gaps = 31/212 (14%)
Query: 84 GKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDI------EDVRREVQIMHHLT 137
G ++G G FG+ + KG T+A +KL DI + +E+++M
Sbjct: 36 GNKMGEGGFGVVY----KGYVNN---TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88
Query: 138 GQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIA-------KGHYTERAAASLLRTIV 190
+ N+VEL G D + LV G L DR+ H + A I
Sbjct: 89 HE-NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI- 146
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGL---SVFYKQGEVFKDIVGSAY 247
+H H IHRD+K N LL DE K +DFGL S + Q + IVG+
Sbjct: 147 NFLHENHH---IHRDIKSANILL---DEAFTAKISDFGLARASEKFAQTVMXXRIVGTTA 200
Query: 248 YIAPEVLKRKYGPEADIWSIGVMLYILLCGVP 279
Y+APE L+ + P++DI+S GV+L ++ G+P
Sbjct: 201 YMAPEALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 139/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK FGL+ + V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILGFGLA--RHTDDEMTGYV 183
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 304 AHAYFAQYHDPDDEPVADPYDQSFESR 330
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 121/298 (40%), Gaps = 45/298 (15%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG-- 138
Y E+G G +G G +F + + + REV ++ HL
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 139 QPNIVEL----KGAYEDKQS-VHLVMELCAGG--ELFDRIIAKGHYTERAAASLLRTIVQ 191
PN+V L + D+++ + LV E D++ G TE ++ +++
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE-TIKDMMFQLLR 131
Query: 192 IIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAP 251
+ HS V+HRDLKP+N L+ + + +K DFGL+ Y +V + +Y AP
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 252 EV-LKRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDP----WP 306
EV L+ Y D+WS+G + + P F S+ IL D P WP
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL----DVIGLPGEEDWP 244
Query: 307 -----------------------SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
I KDL+ K L +P +R++A L+HP+ ++
Sbjct: 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 98/212 (46%), Gaps = 31/212 (14%)
Query: 84 GKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDI------EDVRREVQIMHHLT 137
G ++G G FG+ + KG T+A +KL DI + +E+++M
Sbjct: 30 GNKMGEGGFGVVY----KGYVNN---TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 82
Query: 138 GQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIA-------KGHYTERAAASLLRTIV 190
+ N+VEL G D + LV G L DR+ H + A I
Sbjct: 83 HE-NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI- 140
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGL---SVFYKQGEVFKDIVGSAY 247
+H H IHRD+K N LL DE K +DFGL S + Q + IVG+
Sbjct: 141 NFLHENHH---IHRDIKSANILL---DEAFTAKISDFGLARASEKFAQXVMXXRIVGTTA 194
Query: 248 YIAPEVLKRKYGPEADIWSIGVMLYILLCGVP 279
Y+APE L+ + P++DI+S GV+L ++ G+P
Sbjct: 195 YMAPEALRGEITPKSDIYSFGVVLLEIITGLP 226
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
ELG G FG ++ +Q ++ K D E++ RE QIMH L P IV L
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD-NPYIVRL 75
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERA-AASLLRTIVQIIHTCHSMGVIHR 204
G + +++ LVME+ GG L ++ K + A LL + + +HR
Sbjct: 76 IGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR 134
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSA----YYIAPEVLK-RKYG 259
DL N LL+N+ K +DFGLS + + + + APE + RK+
Sbjct: 135 DLAARNVLLVNRHYA---KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 260 PEADIWSIGVMLY 272
+D+WS GV ++
Sbjct: 192 SRSDVWSYGVTMW 204
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 139/327 (42%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK D GL+ + V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDAGLA--RHTDDEMTGYV 183
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 304 AHAYFAQYHDPDDEPVADPYDQSFESR 330
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 109/254 (42%), Gaps = 19/254 (7%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
LGRG FG H K TG Q A V K +E R E + P IV L
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCA---------VKKVRLEVFRVEELVACAGLSSPRIVPLY 130
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRDL 206
GA + V++ MEL GG L I G E A L ++ + H+ ++H D+
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 190
Query: 207 KPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV------GSAYYIAPEVLKRK-YG 259
K +N LL + + L DFG ++ + + K ++ G+ ++APEV+ K
Sbjct: 191 KADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 248
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ DIWS M+ +L G P W + G + + PS +P +++
Sbjct: 249 AKVDIWSSCCMMLHMLNGCHP-WTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEG 307
Query: 320 LNSDPKQRLTATEV 333
L +P R +A E+
Sbjct: 308 LRKEPVHRASAMEL 321
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 136/316 (43%), Gaps = 44/316 (13%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G +L + I+ T+
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK D GL+ + V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDRGLA--RHTDDEMTGYV 183
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 335 AHPWIKEDGEAPDVPL 350
AH + + + D P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 131/305 (42%), Gaps = 44/305 (14%)
Query: 79 ATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKED---IEDVRREVQIMHH 135
+ Y E+G G +G + +G A K++ ++ N E+ I VR EV ++
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVR-EVALLRR 59
Query: 136 LTG--QPNIVELKGAYEDKQS-----VHLVMELCAGG--ELFDRIIAKGHYTERAAASLL 186
L PN+V L ++ V LV E D+ G E L+
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLM 118
Query: 187 RTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSA 246
R ++ + H+ ++HRDLKPEN L+ + +K DFGL+ Y +V +
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALFPVVVTL 175
Query: 247 YYIAPEV-LKRKYGPEADIWSIGVMLYILLCGVPPFWAESEHG----IFNAI-LRGHIDF 300
+Y APEV L+ Y D+WS+G + + P F SE IF+ I L D+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 235
Query: 301 TSD--------------PWPSISPQAKD----LVKKMLNSDPKQRLTATEVLAHPWIKED 342
D P S+ P+ ++ L+ +ML +P +R++A L H ++ +D
Sbjct: 236 PRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 295
Query: 343 GEAPD 347
P+
Sbjct: 296 EGNPE 300
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 35/266 (13%)
Query: 84 GKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIV 143
G+ LG+G FG TH+ TG+ K + + ++E +EV++M L PN++
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIR---FDEETQRTFLKEVKVMRCLE-HPNVL 70
Query: 144 ELKGAYEDKQSVHLVMELCAGGELFDRIIAKG---HYTERAAASLLRTIVQIIHTCHSMG 200
+ G + ++ + E GG L R I K Y S + I + HSM
Sbjct: 71 KFIGVLYKDKRLNFITEYIKGGTL--RGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN 128
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFY----KQGEVFKD-----------IVGS 245
+IHRDL N L+ EN + DFGL+ Q E + +VG+
Sbjct: 129 IIHRDLNSHNCLV---RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 246 AYYIAPEVLK-RKYGPEADIWSIGVMLYILLCGV---PPFWAESEHGIFNAILRGHIDFT 301
Y++APE++ R Y + D++S G++L ++ V P + + F +RG +D
Sbjct: 186 PYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD--FGLNVRGFLDRY 243
Query: 302 SDPWPSISPQAKDLVKKMLNSDPKQR 327
P+ P + + + DP++R
Sbjct: 244 CP--PNCPPSFFPITVRCCDLDPEKR 267
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 137/327 (41%), Gaps = 48/327 (14%)
Query: 70 LGRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRRE 129
L + + +V Y +G G +G TG + A K ++ R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 130 VQIMHHLTGQPNIVELKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
++++ H+ + N++ L + E+ V+LV L G + I+ T+
Sbjct: 72 LRLLKHMKHE-NVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
L+ I++ + HS +IHRDLKP N L +E+ LK D GL+ + V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDGGLA--RHTDDEMTGYV 183
Query: 244 GSAYYIAPEVLKR--KYGPEADIWSIGVMLYILLCGVPPF-------------------W 282
+ +Y APE++ Y DIWS+G ++ LL G F
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 283 AESEHGIFNAILRGHI-DFTSDP-------WPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
AE I + R +I T P + +P A DL++KML D +R+TA + L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 335 AHPWIKE----DGEAPDVPLDNAVLSR 357
AH + + D E P D + SR
Sbjct: 304 AHAYFAQYHDPDDEPVADPYDQSFESR 330
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 15/196 (7%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+F +E+G GQFG+ HL + + A KTI + + ++ IE E ++M L+ P
Sbjct: 10 TFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLS-HPK 63
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRI-IAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+V+L G ++ + LV E G L D + +G + + + + +
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAS 123
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-R 256
VIHRDL N L+ EN +K +DFG++ F + + G+ + + +PEV
Sbjct: 124 VIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFS 179
Query: 257 KYGPEADIWSIGVMLY 272
+Y ++D+WS GV+++
Sbjct: 180 RYSSKSDVWSFGVLMW 195
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 120/297 (40%), Gaps = 45/297 (15%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG-- 138
Y E+G G +G G +F + + + REV ++ HL
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 139 QPNIVEL----KGAYEDKQS-VHLVMELCAGG--ELFDRIIAKGHYTERAAASLLRTIVQ 191
PN+V L + D+++ + LV E D++ G TE ++ +++
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE-TIKDMMFQLLR 131
Query: 192 IIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAP 251
+ HS V+HRDLKP+N L+ + + +K DFGL+ Y +V + +Y AP
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 252 EV-LKRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDP----WP 306
EV L+ Y D+WS+G + + P F S+ IL D P WP
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL----DVIGLPGEEDWP 244
Query: 307 -----------------------SISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIK 340
I KDL+ K L +P +R++A L+HP+ +
Sbjct: 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 15/196 (7%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+F +E+G GQFG+ HL + + A KTI + + ++ IE E ++M L+ P
Sbjct: 8 TFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLS-HPK 61
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRI-IAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+V+L G ++ + LV E G L D + +G + + + + +
Sbjct: 62 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 121
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-R 256
VIHRDL N L+ EN +K +DFG++ F + + G+ + + +PEV
Sbjct: 122 VIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFS 177
Query: 257 KYGPEADIWSIGVMLY 272
+Y ++D+WS GV+++
Sbjct: 178 RYSSKSDVWSFGVLMW 193
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 15/196 (7%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+F +E+G GQFG+ HL + + A KTI + + ++ IE E ++M L+ P
Sbjct: 13 TFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLS-HPK 66
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRI-IAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+V+L G ++ + LV E G L D + +G + + + + +
Sbjct: 67 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 126
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-R 256
VIHRDL N L+ EN +K +DFG++ F + + G+ + + +PEV
Sbjct: 127 VIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFS 182
Query: 257 KYGPEADIWSIGVMLY 272
+Y ++D+WS GV+++
Sbjct: 183 RYSSKSDVWSFGVLMW 198
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 83 FGKELGRGQFGITHLCTHK----GTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
F ++LG+G FG +C + TG+ A K + +E + D RE++I+ L
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ- 69
Query: 139 QPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
NIV+ KG ++++ L+ME G L D + + H LL+ QI
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 127
Query: 197 HSMGV---IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV----GSAYYI 249
+G IHRDL N L+ N++ +K DFGL+ Q + F + ++
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY 184
Query: 250 APEVL-KRKYGPEADIWSIGVMLYILLCGV 278
APE L + K+ +D+WS GV+LY L +
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
ELG G FG ++ +Q ++ K D E++ RE QIMH L P IV L
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD-NPYIVRL 401
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERA-AASLLRTIVQIIHTCHSMGVIHR 204
G + +++ LVME+ GG L ++ K + A LL + + +HR
Sbjct: 402 IGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR 460
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSA----YYIAPEVLK-RKYG 259
+L N LL+N+ K +DFGLS + + + + APE + RK+
Sbjct: 461 NLAARNVLLVNRHYA---KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 260 PEADIWSIGVMLY 272
+D+WS GV ++
Sbjct: 518 SRSDVWSYGVTMW 530
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 15/196 (7%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+F +E+G GQFG+ HL + + A KTI + + ++ IE E ++M L+ P
Sbjct: 10 TFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLS-HPK 63
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRI-IAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+V+L G ++ + LV E G L D + +G + + + + +
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 123
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-R 256
VIHRDL N L+ EN +K +DFG++ F + + G+ + + +PEV
Sbjct: 124 VIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFS 179
Query: 257 KYGPEADIWSIGVMLY 272
+Y ++D+WS GV+++
Sbjct: 180 RYSSKSDVWSFGVLMW 195
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 36/222 (16%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR----REVQIMHHLTGQPN 141
ELG G G+ H+ +G I RKL++ E +R RE+Q++H P
Sbjct: 23 ELGAGNGGVVTKVQHRPSG------LIMARKLIHLEIKPAIRNQIIRELQVLHECN-SPY 75
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTE-----RAAASLLRTIVQIIHTC 196
IV GA+ + + ME GG L D+++ + + + ++LR + +
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKEAKRIPEEILGKVSIAVLRGLAYLREKH 134
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDI----VGSAYYIAPE 252
++HRD+KP N L+ ++ E +K DFG+S G++ + VG+ Y+APE
Sbjct: 135 Q---IMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMAPE 183
Query: 253 VLK-RKYGPEADIWSIGVMLYILLCG---VPPFWAESEHGIF 290
L+ Y ++DIWS+G+ L L G +PP A+ IF
Sbjct: 184 RLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIF 225
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 15/196 (7%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+F +E+G GQFG+ HL + + A KTI + + + IE E ++M L+ P
Sbjct: 30 TFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIKEGSMSEDDFIE----EAEVMMKLS-HPK 83
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRI-IAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+V+L G ++ + LV E G L D + +G + + + + +
Sbjct: 84 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 143
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-R 256
VIHRDL N L+ EN +K +DFG++ F + + G+ + + +PEV
Sbjct: 144 VIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFS 199
Query: 257 KYGPEADIWSIGVMLY 272
+Y ++D+WS GV+++
Sbjct: 200 RYSSKSDVWSFGVLMW 215
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 15/196 (7%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+F +E+G GQFG+ HL + + A KTI + + ++ IE E ++M L+ P
Sbjct: 11 TFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLS-HPK 64
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRI-IAKGHYTERAAASLLRTIVQIIHTCHSMG 200
+V+L G ++ + LV E G L D + +G + + + + +
Sbjct: 65 LVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 124
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-R 256
VIHRDL N L+ EN +K +DFG++ F + + G+ + + +PEV
Sbjct: 125 VIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFS 180
Query: 257 KYGPEADIWSIGVMLY 272
+Y ++D+WS GV+++
Sbjct: 181 RYSSKSDVWSFGVLMW 196
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 113/263 (42%), Gaps = 36/263 (13%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTG 138
S K +G G+FG +C+ + ++A + L ++ D E IM
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD- 104
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRTIVQIIHTC 196
PNI+ L+G + V +V E G L D + K +T +LR I +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY--------- 247
MG +HRDL N L+ + N K +DFGL G V +D +AY
Sbjct: 164 SDMGYVHRDLAARNILI---NSNLVCKVSDFGL------GRVLEDDPEAAYTTRGGKIPI 214
Query: 248 -YIAPEVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGHIDFTSDP 304
+ +PE + RK+ +D+WS G++L+ ++ G P+W S + A+ G+ P
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY----RLP 270
Query: 305 WPSISPQAKDLVKKMLNSDPKQR 327
P P A L + ML+ K R
Sbjct: 271 PPMDCPAA--LYQLMLDCWQKDR 291
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 128/301 (42%), Gaps = 46/301 (15%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
+ +G G +G Q+ A K ++ R + RE++++ HL + N++
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLS-RPFQSLIHARRTYRELRLLKHLKHE-NVIG 83
Query: 145 LKGAY------EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
L + ED V+LV L G + I+ ++ L+ +++ + HS
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS 141
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKR-- 256
G+IHRDLKP N + +E+ L+ DFGL+ + E V + +Y APE++
Sbjct: 142 AGIIHRDLKPSNVAV---NEDCELRILDFGLA--RQADEEMTGYVATRWYRAPEIMLNWM 196
Query: 257 KYGPEADIWSIGVMLYILLCGVPPF----WAESEHGIFNAI---------------LRGH 297
Y DIWS+G ++ LL G F + + I + R +
Sbjct: 197 HYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTY 256
Query: 298 IDFTSDPWPS---------ISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGEAPDV 348
I + P P +P A DL+ +ML D QR++A E LAH + + + D
Sbjct: 257 IQ-SLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE 315
Query: 349 P 349
P
Sbjct: 316 P 316
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 112/261 (42%), Gaps = 16/261 (6%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNI 142
G+ +G GQFG H + I K + + + + + P+I
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 143 VELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSM 199
V+L G + V ++MELC GEL + + + + ASL+ Q+ + S
Sbjct: 74 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLD--LASLILYAYQLSTALAYLESK 130
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGS--AYYIAPEVLK-R 256
+HRD+ N L+ N +K DFGLS + + +K G ++APE + R
Sbjct: 131 RFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 187
Query: 257 KYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
++ +D+W GV ++ IL+ GV PF + + I G + P P+ P L
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERLPMP-PNCPPTLYSL 244
Query: 316 VKKMLNSDPKQRLTATEVLAH 336
+ K DP +R TE+ A
Sbjct: 245 MTKCWAYDPSRRPRFTELKAQ 265
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 107/254 (42%), Gaps = 43/254 (16%)
Query: 73 PMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDI--------- 123
P + + F KEL I + G G+ F + KL +K++I
Sbjct: 16 PRGSTQTVHEFAKELDATNISIDKVV---GAGE-FGEVCSGRLKLPSKKEISVAIKTLKV 71
Query: 124 ---EDVRREVQIMHHLTGQ---PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--G 175
E RR+ + GQ PNI+ L+G + V +V E G L D + K
Sbjct: 72 GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDA 130
Query: 176 HYTERAAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQ 235
+T +LR I + MG +HRDL N L+ + N K +DFGLS
Sbjct: 131 QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLS----- 182
Query: 236 GEVFKDIVGSAY----------YIAPEVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWA 283
V +D +AY + +PE + RK+ +D+WS G++L+ ++ G P+W
Sbjct: 183 -RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 241
Query: 284 ESEHGIFNAILRGH 297
S + A+ G+
Sbjct: 242 MSNQDVIKAVDEGY 255
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 109/254 (42%), Gaps = 19/254 (7%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
+GRG FG H K TG Q A V K +E R E + P IV L
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCA---------VKKVRLEVFRVEELVACAGLSSPRIVPLY 116
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRDL 206
GA + V++ MEL GG L I G E A L ++ + H+ ++H D+
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 176
Query: 207 KPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV------GSAYYIAPEVLKRK-YG 259
K +N LL + + L DFG ++ + + K ++ G+ ++APEV+ K
Sbjct: 177 KADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 234
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ DIWS M+ +L G P W + G + + PS +P +++
Sbjct: 235 AKVDIWSSCCMMLHMLNGCHP-WTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEG 293
Query: 320 LNSDPKQRLTATEV 333
L +P R +A E+
Sbjct: 294 LRKEPVHRASAMEL 307
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 109/254 (42%), Gaps = 19/254 (7%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
+GRG FG H K TG Q A V K +E R E + P IV L
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCA---------VKKVRLEVFRVEELVACAGLSSPRIVPLY 132
Query: 147 GAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMGVIHRDL 206
GA + V++ MEL GG L I G E A L ++ + H+ ++H D+
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 192
Query: 207 KPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV------GSAYYIAPEVLKRK-YG 259
K +N LL + + L DFG ++ + + K ++ G+ ++APEV+ K
Sbjct: 193 KADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 250
Query: 260 PEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVKKM 319
+ DIWS M+ +L G P W + G + + PS +P +++
Sbjct: 251 AKVDIWSSCCMMLHMLNGCHP-WTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEG 309
Query: 320 LNSDPKQRLTATEV 333
L +P R +A E+
Sbjct: 310 LRKEPVHRASAMEL 323
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 115/272 (42%), Gaps = 16/272 (5%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
R E + G+ +G GQFG H + I K + + + +
Sbjct: 5 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 64
Query: 132 IMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQ 191
+ P+IV+L G + V ++MELC GEL + + + + ASL+ Q
Sbjct: 65 LTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLD--LASLILYAYQ 121
Query: 192 I---IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGS--A 246
+ + S +HRD+ N L+ N +K DFGLS + + +K G
Sbjct: 122 LSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 178
Query: 247 YYIAPEVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGHIDFTSDP 304
++APE + R++ +D+W GV ++ IL+ GV PF + + I G + P
Sbjct: 179 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERLPMP 236
Query: 305 WPSISPQAKDLVKKMLNSDPKQRLTATEVLAH 336
P+ P L+ K DP +R TE+ A
Sbjct: 237 -PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 267
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 112/261 (42%), Gaps = 16/261 (6%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNI 142
G+ +G GQFG H + I K + + + + + P+I
Sbjct: 42 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 101
Query: 143 VELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSM 199
V+L G + V ++MELC GEL + + + + ASL+ Q+ + S
Sbjct: 102 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLD--LASLILYAYQLSTALAYLESK 158
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGS--AYYIAPEVLK-R 256
+HRD+ N L+ N +K DFGLS + + +K G ++APE + R
Sbjct: 159 RFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 215
Query: 257 KYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
++ +D+W GV ++ IL+ GV PF + + I G + P P+ P L
Sbjct: 216 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERLPMP-PNCPPTLYSL 272
Query: 316 VKKMLNSDPKQRLTATEVLAH 336
+ K DP +R TE+ A
Sbjct: 273 MTKCWAYDPSRRPRFTELKAQ 293
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 121/284 (42%), Gaps = 41/284 (14%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQ------- 139
LG+G FG + + +A K I +E + + EV ++ L Q
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVXLLASLNHQYVVRYYA 69
Query: 140 -----PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAA-SLLRTIVQII 193
N V+ A + K ++ + E C L+D I ++ +R L R I++ +
Sbjct: 70 AWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 194 HTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFK------------ 240
HS G+IHR+LKP N + DE+ +K DFGL+ ++ ++ K
Sbjct: 130 SYIHSQGIIHRNLKPXNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 241 --DIVGSAYYIAPEVLKRK--YGPEADIWSIGVMLYILLCGVPPFWAESEH-GIFNAILR 295
+G+A Y+A EVL Y + D +S+G+ I + PF E I +
Sbjct: 187 LTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGI---IFFEXIYPFSTGXERVNILKKLRS 243
Query: 296 GHIDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWI 339
I+F D + K +++ +++ DP +R A +L W+
Sbjct: 244 VSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 112/261 (42%), Gaps = 16/261 (6%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNI 142
G+ +G GQFG H + I K + + + + + P+I
Sbjct: 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 78
Query: 143 VELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSM 199
V+L G + V ++MELC GEL + + + + ASL+ Q+ + S
Sbjct: 79 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLD--LASLILYAYQLSTALAYLESK 135
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGS--AYYIAPEVLK-R 256
+HRD+ N L+ N +K DFGLS + + +K G ++APE + R
Sbjct: 136 RFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 192
Query: 257 KYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
++ +D+W GV ++ IL+ GV PF + + I G + P P+ P L
Sbjct: 193 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERLPMP-PNCPPTLYSL 249
Query: 316 VKKMLNSDPKQRLTATEVLAH 336
+ K DP +R TE+ A
Sbjct: 250 MTKCWAYDPSRRPRFTELKAQ 270
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 112/261 (42%), Gaps = 16/261 (6%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNI 142
G+ +G GQFG H + I K + + + + + P+I
Sbjct: 17 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 76
Query: 143 VELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSM 199
V+L G + V ++MELC GEL + + + + ASL+ Q+ + S
Sbjct: 77 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLD--LASLILYAYQLSTALAYLESK 133
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGS--AYYIAPEVLK-R 256
+HRD+ N L+ N +K DFGLS + + +K G ++APE + R
Sbjct: 134 RFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 190
Query: 257 KYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
++ +D+W GV ++ IL+ GV PF + + I G + P P+ P L
Sbjct: 191 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERLPMP-PNCPPTLYSL 247
Query: 316 VKKMLNSDPKQRLTATEVLAH 336
+ K DP +R TE+ A
Sbjct: 248 MTKCWAYDPSRRPRFTELKAQ 268
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 117/276 (42%), Gaps = 43/276 (15%)
Query: 78 KATYSFGKEL-----------GRGQFGITHLCTHKGTGQQFACKTIAKRKL-VNKEDIED 125
+A + F KE+ G G+FG K G++ I K+ ++ D
Sbjct: 10 QAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRD 69
Query: 126 VRREVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAA 183
E IM PNI+ L+G + V +V E G L D + K G +T
Sbjct: 70 FLGEASIMGQFD-HPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLV 127
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
+LR I + MG +HRDL N L+ + N K +DFGLS V +D
Sbjct: 128 GMLRGISAGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLS------RVLEDDP 178
Query: 244 GSAY----------YIAPEVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFN 291
+AY + APE + RK+ +D+WS G++++ ++ G P+W + +
Sbjct: 179 EAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIK 238
Query: 292 AILRGHIDFTSDPWPSISPQAKDLVKKMLNSDPKQR 327
A+ G+ P P P A L + ML+ K+R
Sbjct: 239 AVEEGY----RLPSPMDCPAA--LYQLMLDCWQKER 268
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 112/261 (42%), Gaps = 16/261 (6%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNI 142
G+ +G GQFG H + I K + + + + + P+I
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 143 VELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSM 199
V+L G + V ++MELC GEL + + + + ASL+ Q+ + S
Sbjct: 74 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLD--LASLILYAYQLSTALAYLESK 130
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGS--AYYIAPEVLK-R 256
+HRD+ N L+ N +K DFGLS + + +K G ++APE + R
Sbjct: 131 RFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 187
Query: 257 KYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
++ +D+W GV ++ IL+ GV PF + + I G + P P+ P L
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERLPMP-PNCPPTLYSL 244
Query: 316 VKKMLNSDPKQRLTATEVLAH 336
+ K DP +R TE+ A
Sbjct: 245 MTKCWAYDPSRRPRFTELKAQ 265
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 30/233 (12%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTG 138
S K +G G+FG +C+ + ++A + L ++ D E IM
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD- 104
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRTIVQIIHTC 196
PNI+ L+G + V +V E G L D + K +T +LR I +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY--------- 247
MG +HRDL N L+ + N K +DFGLS V +D +AY
Sbjct: 164 SDMGAVHRDLAARNILI---NSNLVCKVSDFGLS------RVLEDDPEAAYTTRGGKIPI 214
Query: 248 -YIAPEVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
+ +PE + RK+ +D+WS G++L+ ++ G P+W S + A+ G+
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 30/233 (12%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTG 138
S K +G G+FG +C+ + ++A + L ++ D E IM
Sbjct: 19 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD- 75
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRTIVQIIHTC 196
PNI+ L+G + V +V E G L D + K +T +LR I +
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 134
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY--------- 247
MG +HRDL N L+ + N K +DFGLS V +D +AY
Sbjct: 135 SDMGYVHRDLAARNILI---NSNLVCKVSDFGLS------RVLEDDPEAAYTTRGGKIPI 185
Query: 248 -YIAPEVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
+ +PE + RK+ +D+WS G++L+ ++ G P+W S + A+ G+
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 238
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 26/228 (11%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKL-VNKEDIEDVRREVQIMHHLTGQPNIV 143
K +G G+FG K G++ C I K + D E IM PNI+
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNII 93
Query: 144 ELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRTIVQIIHTCHSMGV 201
L+G + V ++ E G L D + K G +T +LR I + M
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSA 152
Query: 202 IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY----------YIAP 251
+HRDL N L+ + N K +DFG+S V +D +AY + AP
Sbjct: 153 VHRDLAARNILV---NSNLVCKVSDFGMS------RVLEDDPEAAYTTRGGKIPIRWTAP 203
Query: 252 EVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
E + RK+ +D+WS G++++ ++ G P+W S + AI G+
Sbjct: 204 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY 251
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 30/233 (12%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTG 138
S K +G G+FG +C+ + ++A + L ++ D E IM
Sbjct: 19 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD- 75
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRTIVQIIHTC 196
PNI+ L+G + V +V E G L D + K +T +LR I +
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 134
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY--------- 247
MG +HRDL N L+ + N K +DFGLS V +D +AY
Sbjct: 135 SDMGYVHRDLAARNILI---NSNLVCKVSDFGLS------RVLEDDPEAAYTTRGGKIPI 185
Query: 248 -YIAPEVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
+ +PE + RK+ +D+WS G++L+ ++ G P+W S + A+ G+
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 238
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 112/261 (42%), Gaps = 16/261 (6%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNI 142
G+ +G GQFG H + I K + + + + + P+I
Sbjct: 11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 70
Query: 143 VELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSM 199
V+L G + V ++MELC GEL + + + + ASL+ Q+ + S
Sbjct: 71 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLD--LASLILYAYQLSTALAYLESK 127
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGS--AYYIAPEVLK-R 256
+HRD+ N L+ N +K DFGLS + + +K G ++APE + R
Sbjct: 128 RFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 184
Query: 257 KYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
++ +D+W GV ++ IL+ GV PF + + I G + P P+ P L
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERLPMP-PNCPPTLYSL 241
Query: 316 VKKMLNSDPKQRLTATEVLAH 336
+ K DP +R TE+ A
Sbjct: 242 MTKCWAYDPSRRPRFTELKAQ 262
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 20/200 (10%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
+++G G FG H G+ A K + ++ + E + + REV IM L PNIV
Sbjct: 43 EKIGAGSFGTVHRAEWHGS--DVAVKILMEQDF-HAERVNEFLREVAIMKRLR-HPNIVL 98
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRII----AKGHYTERAAASLLRTIVQIIHTCHSMG 200
GA ++ +V E + G L+ R++ A+ ER S+ + + ++ H+
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 201 --VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF---KDIVGSAYYIAPEVLK 255
++HRDLK N L+ D+ +K DFGLS + F K G+ ++APEVL+
Sbjct: 158 PPIVHRDLKSPNLLV---DKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLR 212
Query: 256 RKYGPE-ADIWSIGVMLYIL 274
+ E +D++S GV+L+ L
Sbjct: 213 DEPSNEKSDVYSFGVILWEL 232
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 30/233 (12%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTG 138
S K +G G+FG +C+ + ++A + L ++ D E IM
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD- 104
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRTIVQIIHTC 196
PNI+ L+G + V +V E G L D + K +T +LR I +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY--------- 247
MG +HRDL N L+ + N K +DFGLS V +D +AY
Sbjct: 164 SDMGFVHRDLAARNILI---NSNLVCKVSDFGLS------RVLEDDPEAAYTTRGGKIPI 214
Query: 248 -YIAPEVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
+ +PE + RK+ +D+WS G++L+ ++ G P+W S + A+ G+
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 30/233 (12%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTG 138
S K +G G+FG +C+ + ++A + L ++ D E IM
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD- 104
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRTIVQIIHTC 196
PNI+ L+G + V +V E G L D + K +T +LR I +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY--------- 247
MG +HRDL N L+ + N K +DFGLS V +D +AY
Sbjct: 164 SDMGYVHRDLAARNILI---NSNLVCKVSDFGLS------RVLEDDPEAAYTTRGGKIPI 214
Query: 248 -YIAPEVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
+ +PE + RK+ +D+WS G++L+ ++ G P+W S + A+ G+
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 30/233 (12%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTG 138
S K +G G+FG +C+ + ++A + L ++ D E IM
Sbjct: 46 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD- 102
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRTIVQIIHTC 196
PNI+ L+G + V +V E G L D + K +T +LR I +
Sbjct: 103 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 161
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY--------- 247
MG +HRDL N L+ + N K +DFGLS V +D +AY
Sbjct: 162 SDMGYVHRDLAARNILI---NSNLVCKVSDFGLS------RVLEDDPEAAYTTRGGKIPI 212
Query: 248 -YIAPEVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
+ +PE + RK+ +D+WS G++L+ ++ G P+W S + A+ G+
Sbjct: 213 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 265
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 30/233 (12%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTG 138
S K +G G+FG +C+ + ++A + L ++ D E IM
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD- 104
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRTIVQIIHTC 196
PNI+ L+G + V +V E G L D + K +T +LR I +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY--------- 247
MG +HRDL N L+ + N K +DFGLS V +D +AY
Sbjct: 164 SDMGYVHRDLAARNILI---NSNLVCKVSDFGLS------RVLEDDPEAAYTTRGGKIPI 214
Query: 248 -YIAPEVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
+ +PE + RK+ +D+WS G++L+ ++ G P+W S + A+ G+
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 30/233 (12%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTG 138
S K +G G+FG +C+ + ++A + L ++ D E IM
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD- 104
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRTIVQIIHTC 196
PNI+ L+G + V +V E G L D + K +T +LR I +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY--------- 247
MG +HRDL N L+ + N K +DFGLS V +D +AY
Sbjct: 164 SDMGYVHRDLAARNILI---NSNLVCKVSDFGLS------RVLEDDPEAAYTTRGGKIPI 214
Query: 248 -YIAPEVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
+ +PE + RK+ +D+WS G++L+ ++ G P+W S + A+ G+
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 30/233 (12%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTG 138
S K +G G+FG +C+ + ++A + L ++ D E IM
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD- 104
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRTIVQIIHTC 196
PNI+ L+G + V +V E G L D + K +T +LR I +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY--------- 247
MG +HRDL N L+ + N K +DFGLS V +D +AY
Sbjct: 164 SDMGYVHRDLAARNILI---NSNLVCKVSDFGLS------RVLEDDPEAAYTTRGGKIPI 214
Query: 248 -YIAPEVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
+ +PE + RK+ +D+WS G++L+ ++ G P+W S + A+ G+
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 125/304 (41%), Gaps = 39/304 (12%)
Query: 79 ATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVR--REVQIMHHL 136
+ Y E+G G +G + +G A K++ + REV ++ L
Sbjct: 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRL 68
Query: 137 TG--QPNIVELKGAYEDKQS-----VHLVMELCAGG--ELFDRIIAKGHYTERAAASLLR 187
PN+V L ++ V LV E D+ G E L+R
Sbjct: 69 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMR 127
Query: 188 TIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY 247
++ + H+ ++HRDLKPEN L+ + +K DFGL+ Y +V + +
Sbjct: 128 QFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALTPVVVTLW 184
Query: 248 YIAPEV-LKRKYGPEADIWSIGVMLYILLCGVPPFWAESEHG----IFNAI-LRGHIDFT 301
Y APEV L+ Y D+WS+G + + P F SE IF+ I L D+
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 244
Query: 302 SD--------------PWPSISPQAKD----LVKKMLNSDPKQRLTATEVLAHPWIKEDG 343
D P S+ P+ ++ L+ +ML +P +R++A L H ++ +D
Sbjct: 245 RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE 304
Query: 344 EAPD 347
P+
Sbjct: 305 GNPE 308
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 30/233 (12%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTG 138
S K +G G+FG +C+ + ++A + L ++ D E IM
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD- 104
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRTIVQIIHTC 196
PNI+ L+G + V +V E G L D + K +T +LR I +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY--------- 247
MG +HRDL N L+ + N K +DFGLS V +D +AY
Sbjct: 164 SDMGYVHRDLAARNILI---NSNLVCKVSDFGLS------RVLEDDPEAAYTTRGGKIPI 214
Query: 248 -YIAPEVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
+ +PE + RK+ +D+WS G++L+ ++ G P+W S + A+ G+
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 83 FGKELGRGQFGITHLCTHK----GTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
F ++LG+G FG +C + TG+ A K + +E + D RE++I+ L
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ- 72
Query: 139 QPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
NIV+ KG ++++ L+ME G L D + A H LL+ QI
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQA--HAERIDHIKLLQYTSQICKGM 130
Query: 197 HSMGV---IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV----GSAYYI 249
+G IHRDL N L+ N++ +K DFGL+ Q + + ++
Sbjct: 131 EYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 250 APEVL-KRKYGPEADIWSIGVMLYILLCGV 278
APE L + K+ +D+WS GV+LY L +
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 113/272 (41%), Gaps = 16/272 (5%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
R E + G+ +G GQFG H + I K + + + +
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 442
Query: 132 IMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQ 191
+ P+IV+L G + V ++MELC GEL R + ASL+ Q
Sbjct: 443 LTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGEL--RSFLQVRKFSLDLASLILYAYQ 499
Query: 192 I---IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGS--A 246
+ + S +HRD+ N L+ N +K DFGLS + + +K G
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 556
Query: 247 YYIAPEVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGHIDFTSDP 304
++APE + R++ +D+W GV ++ IL+ GV PF + + I G + P
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERLPMP 614
Query: 305 WPSISPQAKDLVKKMLNSDPKQRLTATEVLAH 336
P+ P L+ K DP +R TE+ A
Sbjct: 615 -PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 645
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 26/228 (11%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKL-VNKEDIEDVRREVQIMHHLTGQPNIV 143
K +G G+FG K G++ C I K + D E IM PNI+
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNII 78
Query: 144 ELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRTIVQIIHTCHSMGV 201
L+G + V ++ E G L D + K G +T +LR I + M
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSY 137
Query: 202 IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY----------YIAP 251
+HRDL N L+ + N K +DFG+S V +D +AY + AP
Sbjct: 138 VHRDLAARNILV---NSNLVCKVSDFGMS------RVLEDDPEAAYTTRGGKIPIRWTAP 188
Query: 252 EVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
E + RK+ +D+WS G++++ ++ G P+W S + AI G+
Sbjct: 189 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY 236
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 26/228 (11%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKL-VNKEDIEDVRREVQIMHHLTGQPNIV 143
K +G G+FG K G++ C I K + D E IM PNI+
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNII 72
Query: 144 ELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRTIVQIIHTCHSMGV 201
L+G + V ++ E G L D + K G +T +LR I + M
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSY 131
Query: 202 IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY----------YIAP 251
+HRDL N L+ + N K +DFG+S V +D +AY + AP
Sbjct: 132 VHRDLAARNILV---NSNLVCKVSDFGMS------RVLEDDPEAAYTTRGGKIPIRWTAP 182
Query: 252 EVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
E + RK+ +D+WS G++++ ++ G P+W S + AI G+
Sbjct: 183 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY 230
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 99/230 (43%), Gaps = 43/230 (18%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTGQ 139
FGK LG G FG T G G++ A +A + L + ++ E + E++IM HL
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTER-----AAASLLRT------ 188
NIV L GA V ++ E C G+L + + K E A S L T
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 189 ---IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGS 245
+ Q + S IHRD+ N LL N K DFGL+ +DI+
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTN---GHVAKIGDFGLA---------RDIMND 217
Query: 246 AYYI------------APE-VLKRKYGPEADIWSIGVMLY-ILLCGVPPF 281
+ YI APE + Y ++D+WS G++L+ I G+ P+
Sbjct: 218 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 83 FGKELGRGQFGITHLCTHK----GTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
F ++LG+G FG +C + TG+ A K + +E + D RE++I+ L
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ- 73
Query: 139 QPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
NIV+ KG ++++ L+ME G L D + + H LL+ QI
Sbjct: 74 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 131
Query: 197 HSMGV---IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV----GSAYYI 249
+G IHRDL N L+ N++ +K DFGL+ Q + + ++
Sbjct: 132 EYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 188
Query: 250 APEVL-KRKYGPEADIWSIGVMLYILLCGV 278
APE L + K+ +D+WS GV+LY L +
Sbjct: 189 APESLTESKFSVASDVWSFGVVLYELFTYI 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 83 FGKELGRGQFGITHLCTHK----GTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
F ++LG+G FG +C + TG+ A K + +E + D RE++I+ L
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ- 100
Query: 139 QPNIVELKGA--YEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
NIV+ KG ++++ L+ME G L D + + H LL+ QI
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 158
Query: 197 HSMGV---IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV----GSAYYI 249
+G IHRDL N L+ N++ +K DFGL+ Q + + ++
Sbjct: 159 EYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 215
Query: 250 APEVL-KRKYGPEADIWSIGVMLYILLCGV 278
APE L + K+ +D+WS GV+LY L +
Sbjct: 216 APESLTESKFSVASDVWSFGVVLYELFTYI 245
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 83 FGKELGRGQFGITHLCTHK----GTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
F ++LG+G FG +C + TG+ A K + +E + D RE++I+ L
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ- 76
Query: 139 QPNIVELKGA--YEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
NIV+ KG ++++ L+ME G L D + + H LL+ QI
Sbjct: 77 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 134
Query: 197 HSMGV---IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV----GSAYYI 249
+G IHRDL N L+ N++ +K DFGL+ Q + + ++
Sbjct: 135 EYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 191
Query: 250 APEVL-KRKYGPEADIWSIGVMLYILLCGV 278
APE L + K+ +D+WS GV+LY L +
Sbjct: 192 APESLTESKFSVASDVWSFGVVLYELFTYI 221
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 97/208 (46%), Gaps = 17/208 (8%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+ G+ +G G FG +KG + + ++ + EV ++ T N
Sbjct: 15 TVGQRIGSGSFG----TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 69
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIA-KGHYTERAAASLLRTIVQIIHTCHSMG 200
I+ G Y K + +V + C G L+ + A + + + + R + + H+
Sbjct: 70 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS 128
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVF---YKQGEVFKDIVGSAYYIAPEVLKRK 257
+IHRDLK N L E++ +K DFGL+ + F+ + GS ++APEV++ +
Sbjct: 129 IIHRDLKSNNIFL---HEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 185
Query: 258 ----YGPEADIWSIGVMLYILLCGVPPF 281
Y ++D+++ G++LY L+ G P+
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 83 FGKELGRGQFGITHLCTHK----GTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
F ++LG+G FG +C + TG+ A K + +E + D RE++I+ L
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ- 68
Query: 139 QPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
NIV+ KG ++++ L+ME G L D + + H LL+ QI
Sbjct: 69 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 126
Query: 197 HSMGV---IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV----GSAYYI 249
+G IHRDL N L+ N++ +K DFGL+ Q + + ++
Sbjct: 127 EYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 183
Query: 250 APEVL-KRKYGPEADIWSIGVMLYILLCGV 278
APE L + K+ +D+WS GV+LY L +
Sbjct: 184 APESLTESKFSVASDVWSFGVVLYELFTYI 213
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 83 FGKELGRGQFGITHLCTHK----GTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
F ++LG+G FG +C + TG+ A K + +E + D RE++I+ L
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ- 75
Query: 139 QPNIVELKGA--YEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
NIV+ KG ++++ L+ME G L D + + H LL+ QI
Sbjct: 76 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 133
Query: 197 HSMGV---IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV----GSAYYI 249
+G IHRDL N L+ N++ +K DFGL+ Q + + ++
Sbjct: 134 EYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 190
Query: 250 APEVL-KRKYGPEADIWSIGVMLYILLCGV 278
APE L + K+ +D+WS GV+LY L +
Sbjct: 191 APESLTESKFSVASDVWSFGVVLYELFTYI 220
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 83 FGKELGRGQFGITHLCTHK----GTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
F ++LG+G FG +C + TG+ A K + +E + D RE++I+ L
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ- 69
Query: 139 QPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
NIV+ KG ++++ L+ME G L D + + H LL+ QI
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 127
Query: 197 HSMGV---IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV----GSAYYI 249
+G IHRDL N L+ N++ +K DFGL+ Q + + ++
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 250 APEVL-KRKYGPEADIWSIGVMLYILLCGV 278
APE L + K+ +D+WS GV+LY L +
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 83 FGKELGRGQFGITHLCTHK----GTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
F ++LG+G FG +C + TG+ A K + +E + D RE++I+ L
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ- 74
Query: 139 QPNIVELKGA--YEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
NIV+ KG ++++ L+ME G L D + + H LL+ QI
Sbjct: 75 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 132
Query: 197 HSMGV---IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV----GSAYYI 249
+G IHRDL N L+ N++ +K DFGL+ Q + + ++
Sbjct: 133 EYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 189
Query: 250 APEVL-KRKYGPEADIWSIGVMLYILLCGV 278
APE L + K+ +D+WS GV+LY L +
Sbjct: 190 APESLTESKFSVASDVWSFGVVLYELFTYI 219
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 83 FGKELGRGQFGITHLCTHK----GTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
F ++LG+G FG +C + TG+ A K + +E + D RE++I+ L
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ- 72
Query: 139 QPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
NIV+ KG ++++ L+ME G L R + H LL+ QI
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEFLPYGSL--REYLQKHKERIDHIKLLQYTSQICKGM 130
Query: 197 HSMGV---IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV----GSAYYI 249
+G IHRDL N L+ N++ +K DFGL+ Q + + ++
Sbjct: 131 EYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 250 APEVL-KRKYGPEADIWSIGVMLYILLCGV 278
APE L + K+ +D+WS GV+LY L +
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 83 FGKELGRGQFGITHLCTHK----GTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
F ++LG+G FG +C + TG+ A K + +E + D RE++I+ L
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ- 69
Query: 139 QPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
NIV+ KG ++++ L+ME G L D + + H LL+ QI
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 127
Query: 197 HSMGV---IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV----GSAYYI 249
+G IHRDL N L+ N++ +K DFGL+ Q + + ++
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 250 APEVL-KRKYGPEADIWSIGVMLYILLCGV 278
APE L + K+ +D+WS GV+LY L +
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 22/221 (9%)
Query: 87 LGRGQFGITHLCTH----KGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNI 142
+G G+FG +C+ G + F K K+ D E IM PN+
Sbjct: 41 IGAGEFG--EVCSGHLKLPGKREIFVAIKTLKSGYTEKQR-RDFLSEASIMGQFD-HPNV 96
Query: 143 VELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRTIVQIIHTCHSMG 200
+ L+G V ++ E G L D + + G +T +LR I + M
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN 155
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAY---YIAPEVL 254
+HRDL N L+ + N K +DFGLS F + + +G + APE +
Sbjct: 156 YVHRDLAARNILV---NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 212
Query: 255 K-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAI 293
+ RK+ +D+WS G++++ ++ G P+W + + NAI
Sbjct: 213 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI 253
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 83 FGKELGRGQFGITHLCTHK----GTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
F ++LG+G FG +C + TG+ A K + +E + D RE++I+ L
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ- 72
Query: 139 QPNIVELKGA--YEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
NIV+ KG ++++ L+ME G L D + + H LL+ QI
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 130
Query: 197 HSMGV---IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV----GSAYYI 249
+G IHRDL N L+ N++ +K DFGL+ Q + + ++
Sbjct: 131 EYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 250 APEVL-KRKYGPEADIWSIGVMLYILLCGV 278
APE L + K+ +D+WS GV+LY L +
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 102/233 (43%), Gaps = 30/233 (12%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTG 138
S K +G G+FG +C+ + ++A + L ++ D E IM
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD- 104
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRTIVQIIHTC 196
PNI+ L+G + V +V E G L D + K +T +LR I +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 197 HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY--------- 247
MG +HRDL N L+ + N K +DFGL+ V +D +AY
Sbjct: 164 SDMGYVHRDLAARNILI---NSNLVCKVSDFGLA------RVLEDDPEAAYTTRGGKIPI 214
Query: 248 -YIAPEVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
+ +PE + RK+ +D+WS G++L+ ++ G P+W S + A+ G+
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 83 FGKELGRGQFGITHLCTHK----GTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
F ++LG+G FG +C + TG+ A K + +E + D RE++I+ L
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ- 67
Query: 139 QPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
NIV+ KG ++++ L+ME G L D + + H LL+ QI
Sbjct: 68 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 125
Query: 197 HSMGV---IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV----GSAYYI 249
+G IHRDL N L+ N++ +K DFGL+ Q + + ++
Sbjct: 126 EYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 182
Query: 250 APEVL-KRKYGPEADIWSIGVMLYILLCGV 278
APE L + K+ +D+WS GV+LY L +
Sbjct: 183 APESLTESKFSVASDVWSFGVVLYELFTYI 212
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 97/230 (42%), Gaps = 43/230 (18%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTGQ 139
FGK LG G FG T G G++ A +A + L + ++ E + E++IM HL
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELFDRI--------------IAKGHYTERAAASL 185
NIV L GA V ++ E C G+L + + IA + R
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGS 245
+ Q + S IHRD+ N LL N K DFGL+ +DI+
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTN---GHVAKIGDFGLA---------RDIMND 217
Query: 246 AYYI------------APE-VLKRKYGPEADIWSIGVMLY-ILLCGVPPF 281
+ YI APE + Y ++D+WS G++L+ I G+ P+
Sbjct: 218 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 83 FGKELGRGQFGITHLCTHK----GTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
F ++LG+G FG +C + TG+ A K + +E + D RE++I+ L
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ- 70
Query: 139 QPNIVELKGAYED--KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
NIV+ KG ++++ L+ME G L D + + H LL+ QI
Sbjct: 71 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 128
Query: 197 HSMGV---IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV----GSAYYI 249
+G IHR+L N L+ N++ +K DFGL+ Q + + + ++
Sbjct: 129 EYLGTKRYIHRNLATRNILVENENR---VKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY 185
Query: 250 APEVL-KRKYGPEADIWSIGVMLYILLCGV 278
APE L + K+ +D+WS GV+LY L +
Sbjct: 186 APESLTESKFSVASDVWSFGVVLYELFTYI 215
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+ G+ +G G FG +KG + + ++ + EV ++ T N
Sbjct: 38 TVGQRIGSGSFG----TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 92
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRI-IAKGHYTERAAASLLRTIVQIIHTCHSMG 200
I+ G Y K + +V + C G L+ + I + + + R Q + H+
Sbjct: 93 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 151
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVF---YKQGEVFKDIVGSAYYIAPEVL--- 254
+IHRDLK N L E+ +K DFGL+ + F+ + GS ++APEV+
Sbjct: 152 IIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 208
Query: 255 -KRKYGPEADIWSIGVMLYILLCGVPPF 281
K Y ++D+++ G++LY L+ G P+
Sbjct: 209 DKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 83 FGKELGRGQFGITHLCTHK----GTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
F ++LG+G FG +C + TG+ A K + +E + D RE++I+ L
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ- 87
Query: 139 QPNIVELKGA--YEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
NIV+ KG ++++ L+ME G L D + + H LL+ QI
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 145
Query: 197 HSMGV---IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV----GSAYYI 249
+G IHRDL N L+ N++ +K DFGL+ Q + + ++
Sbjct: 146 EYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 250 APEVL-KRKYGPEADIWSIGVMLYILLCGV 278
APE L + K+ +D+WS GV+LY L +
Sbjct: 203 APESLTESKFSVASDVWSFGVVLYELFTYI 232
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 83 FGKELGRGQFGITHLCTHK----GTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTG 138
F ++LG+G FG +C + TG+ A K + +E + D RE++I+ L
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ- 87
Query: 139 QPNIVELKGA--YEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC 196
NIV+ KG ++++ L+ME G L D + + H LL+ QI
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 145
Query: 197 HSMGV---IHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV----GSAYYI 249
+G IHRDL N L+ N++ +K DFGL+ Q + + ++
Sbjct: 146 EYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 250 APEVL-KRKYGPEADIWSIGVMLYILLCGV 278
APE L + K+ +D+WS GV+LY L +
Sbjct: 203 APESLTESKFSVASDVWSFGVVLYELFTYI 232
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+ G+ +G G FG +KG + + ++ + EV ++ T N
Sbjct: 16 TVGQRIGSGSFG----TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 70
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRI-IAKGHYTERAAASLLRTIVQIIHTCHSMG 200
I+ G Y K + +V + C G L+ + I + + + R Q + H+
Sbjct: 71 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 129
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVF---YKQGEVFKDIVGSAYYIAPEVL--- 254
+IHRDLK N L E+ +K DFGL+ + F+ + GS ++APEV+
Sbjct: 130 IIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 255 -KRKYGPEADIWSIGVMLYILLCGVPPF 281
K Y ++D+++ G++LY L+ G P+
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 122/299 (40%), Gaps = 45/299 (15%)
Query: 80 TYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIE-DVRREVQIMHHLTG 138
TY +LG G + + K T A K I +L ++E REV ++ L
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEI---RLEHEEGAPCTAIREVSLLKDLK- 58
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGG--ELFDRI--IAKGHYTERAAASLLRTIVQIIH 194
NIV L ++S+ LV E + D I H + LLR +
Sbjct: 59 HANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAY--- 115
Query: 195 TCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK-QGEVFKDIVGSAYYIAPEV 253
CH V+HRDLKP+N L+ +E LK DFGL+ + + + V + +Y P++
Sbjct: 116 -CHRQKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDI 171
Query: 254 L--KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSI--- 308
L Y + D+W +G + Y + G P F + + I R T + WP I
Sbjct: 172 LLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSN 231
Query: 309 -------------------SPQ----AKDLVKKMLNSDPKQRLTATEVLAHPWIKEDGE 344
+P+ DL+ K+L + + R++A + + HP+ GE
Sbjct: 232 EEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE 290
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+ G+ +G G FG +KG + + ++ + EV ++ T N
Sbjct: 13 TVGQRIGSGSFG----TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 67
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRI-IAKGHYTERAAASLLRTIVQIIHTCHSMG 200
I+ G Y K + +V + C G L+ + I + + + R Q + H+
Sbjct: 68 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 126
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVF---YKQGEVFKDIVGSAYYIAPEVL--- 254
+IHRDLK N L E+ +K DFGL+ + F+ + GS ++APEV+
Sbjct: 127 IIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 183
Query: 255 -KRKYGPEADIWSIGVMLYILLCGVPPF 281
K Y ++D+++ G++LY L+ G P+
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+ G+ +G G FG +KG + + ++ + EV ++ T N
Sbjct: 16 TVGQRIGSGSFG----TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 70
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRI-IAKGHYTERAAASLLRTIVQIIHTCHSMG 200
I+ G Y K + +V + C G L+ + I + + + R Q + H+
Sbjct: 71 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 129
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVF---YKQGEVFKDIVGSAYYIAPEVL--- 254
+IHRDLK N L E+ +K DFGL+ + F+ + GS ++APEV+
Sbjct: 130 IIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 255 -KRKYGPEADIWSIGVMLYILLCGVPPF 281
K Y ++D+++ G++LY L+ G P+
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+ G+ +G G FG +KG + + ++ + EV ++ T N
Sbjct: 39 TVGQRIGSGSFG----TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 93
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRI-IAKGHYTERAAASLLRTIVQIIHTCHSMG 200
I+ G Y K + +V + C G L+ + I + + + R Q + H+
Sbjct: 94 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 152
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVF---YKQGEVFKDIVGSAYYIAPEVL--- 254
+IHRDLK N L E+ +K DFGL+ + F+ + GS ++APEV+
Sbjct: 153 IIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 255 -KRKYGPEADIWSIGVMLYILLCGVPPF 281
K Y ++D+++ G++LY L+ G P+
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 116/261 (44%), Gaps = 35/261 (13%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNI 142
G+++GRG FG + A K+ R+ + + +E +I+ + PNI
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSC--RETLPPDLKAKFLQEARILKQYS-HPNI 174
Query: 143 VELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQII-------HT 195
V L G KQ +++VMEL GG+ + +G A ++T++Q++
Sbjct: 175 VRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG------ARLRVKTLLQMVGDAAAGMEY 228
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS------VFYKQGEVFKDIVGSAYYI 249
S IHRDL N L+ K+ LK +DFG+S V+ G + + V +
Sbjct: 229 LESKCCIHRDLAARNCLVTEKNV---LKISDFGMSREEADGVYAASGGLRQVPVK---WT 282
Query: 250 APEVLKR-KYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPS 307
APE L +Y E+D+WS G++L+ G P+ S + +G P P
Sbjct: 283 APEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKG----GRLPCPE 338
Query: 308 ISPQAK-DLVKKMLNSDPKQR 327
+ P A L+++ +P QR
Sbjct: 339 LCPDAVFRLMEQCWAYEPGQR 359
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+ G+ +G G FG +KG + + ++ + EV ++ T N
Sbjct: 11 TVGQRIGSGSFG----TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 65
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRI-IAKGHYTERAAASLLRTIVQIIHTCHSMG 200
I+ G Y K + +V + C G L+ + I + + + R Q + H+
Sbjct: 66 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVF---YKQGEVFKDIVGSAYYIAPEVL--- 254
+IHRDLK N L E+ +K DFGL+ + F+ + GS ++APEV+
Sbjct: 125 IIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 255 -KRKYGPEADIWSIGVMLYILLCGVPPF 281
K Y ++D+++ G++LY L+ G P+
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 130/311 (41%), Gaps = 56/311 (18%)
Query: 76 DVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHH 135
D+ + Y K LG G G+ ++ A K I L + + ++ RE++I+
Sbjct: 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIV---LTDPQSVKHALREIKIIRR 64
Query: 136 LTGQPNIVEL--------------KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERA 181
L NIV++ G+ + SV++V E ++ +G E
Sbjct: 65 L-DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD--LANVLEQGPLLEEH 121
Query: 182 AASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV-----FYKQG 236
A + +++ + HS V+HRDLKP N + E+ LK DFGL+ + +G
Sbjct: 122 ARLFMYQLLRGLKYIHSANVLHRDLKPANLFI--NTEDLVLKIGDFGLARIMDPHYSHKG 179
Query: 237 EVFKDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCG----------------- 277
+ + +V + +Y +P +L Y D+W+ G + +L G
Sbjct: 180 HLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238
Query: 278 --VPPFWAESEHGIFNAI---LRGHIDFTSDPW----PSISPQAKDLVKKMLNSDPKQRL 328
+P E + + I +R + P P IS +A D ++++L P RL
Sbjct: 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRL 298
Query: 329 TATEVLAHPWI 339
TA E L+HP++
Sbjct: 299 TAEEALSHPYM 309
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 97/208 (46%), Gaps = 17/208 (8%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+ G+ +G G FG +KG + + ++ + EV ++ T N
Sbjct: 27 TVGQRIGSGSFG----TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 81
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIA-KGHYTERAAASLLRTIVQIIHTCHSMG 200
I+ G Y K + +V + C G L+ + A + + + + R + + H+
Sbjct: 82 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS 140
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSV---FYKQGEVFKDIVGSAYYIAPEVLKRK 257
+IHRDLK N L E++ +K DFGL+ + F+ + GS ++APEV++ +
Sbjct: 141 IIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 258 ----YGPEADIWSIGVMLYILLCGVPPF 281
Y ++D+++ G++LY L+ G P+
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 113/272 (41%), Gaps = 16/272 (5%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
R E + G+ +G GQFG H + I K + + + +
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 442
Query: 132 IMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQ 191
+ P+IV+L G + V ++MELC GEL R + ASL+ Q
Sbjct: 443 LTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGEL--RSFLQVRKFSLDLASLILYAYQ 499
Query: 192 I---IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGS--A 246
+ + S +HRD+ N L+ D +K DFGLS + + +K G
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVSATD---CVKLGDFGLSRYMEDSTYYKASKGKLPI 556
Query: 247 YYIAPEVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGHIDFTSDP 304
++APE + R++ +D+W GV ++ IL+ GV PF + + I G + P
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERLPMP 614
Query: 305 WPSISPQAKDLVKKMLNSDPKQRLTATEVLAH 336
P+ P L+ K DP +R TE+ A
Sbjct: 615 -PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 645
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 72
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSMGVI 202
G + +++ E G L D + + + E +A LL QI + I
Sbjct: 73 LGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 131
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HRDL N L+ EN +K DFGLS G+ F G+ + + APE L K+
Sbjct: 132 HRDLAARNCLV---GENHLVKVADFGLSRL-MTGDTFTAHAGAKFPIKWTAPESLAYNKF 187
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 30/208 (14%)
Query: 85 KELGRGQFG-ITHLC---THKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
++LG G FG ++ C T+ GTG+ A K + + + ++E+ I+ L +
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KADCGPQHRSGWKQEIDILRTLYHE- 76
Query: 141 NIVELKGAYEDK--QSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC-- 196
+I++ KG ED+ +S+ LVME G L D Y R + L + ++ C
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRD-------YLPRHSIGLAQLLLFAQQICEG 129
Query: 197 ----HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQG----EVFKDIVGSAYY 248
HS IHR+L N LL D + +K DFGL+ +G V +D ++
Sbjct: 130 MAYLHSQHYIHRNLAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 186
Query: 249 IAPEVLKR-KYGPEADIWSIGVMLYILL 275
APE LK K+ +D+WS GV LY LL
Sbjct: 187 YAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 16/206 (7%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+F KELG GQFG+ +G A K I + + E IE E ++M +L+ +
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQ-YDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHE-K 80
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGH-YTERAAASLLRTIVQIIHTCHSMG 200
+V+L G ++ + ++ E A G L + + H + + + + + + + S
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-R 256
+HRDL N L+ ++ +K +DFGLS + E + VGS + + PEVL
Sbjct: 141 FLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS 196
Query: 257 KYGPEADIWSIGVMLY-ILLCGVPPF 281
K+ ++DIW+ GV+++ I G P+
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 110/261 (42%), Gaps = 16/261 (6%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNI 142
G+ +G GQFG H + I K + + + + + P+I
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 143 VELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSM 199
V+L G + V ++MELC GEL R + ASL+ Q+ + S
Sbjct: 74 VKLIGVITE-NPVWIIMELCTLGEL--RSFLQVRKFSLDLASLILYAYQLSTALAYLESK 130
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGS--AYYIAPEVLK-R 256
+HRD+ N L+ D +K DFGLS + + +K G ++APE + R
Sbjct: 131 RFVHRDIAARNVLVSATD---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 187
Query: 257 KYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDL 315
++ +D+W GV ++ IL+ GV PF + + I G + P P+ P L
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERLPMP-PNCPPTLYSL 244
Query: 316 VKKMLNSDPKQRLTATEVLAH 336
+ K DP +R TE+ A
Sbjct: 245 MTKCWAYDPSRRPRFTELKAQ 265
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 119/278 (42%), Gaps = 43/278 (15%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDI-EDVRREVQIMHHLTGQPNIVEL 145
L G F + G+G+++A K R L N+E+ + +EV M L+G PNIV+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALK----RLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQF 91
Query: 146 KGAYE--------DKQSVHLVMELCAGG--ELFDRIIAKGHYTERAAASLLRTIVQIIHT 195
A + L+ ELC G E ++ ++G + + + +
Sbjct: 92 CSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQH 151
Query: 196 CHSMG--VIHRDLKPENFLLLNKDENSPLKATDFGLSVFY-----------KQGEVFKDI 242
H +IHRDLK EN LL N+ +K DFG + ++ V ++I
Sbjct: 152 MHRQKPPIIHRDLKVENLLLSNQ---GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEI 208
Query: 243 V--GSAYYIAPEVL----KRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRG 296
+ Y PE++ G + DIW++G +LY+L PF ++ I N
Sbjct: 209 TRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNG---- 264
Query: 297 HIDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
++ P + L++ ML +P++RL+ EV+
Sbjct: 265 --KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVV 300
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 16/206 (7%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+F KELG GQFG+ +G A K I + + E IE E ++M +L+ +
Sbjct: 11 TFLKELGTGQFGVVKYGKWRGQ-YDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHE-K 64
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGH-YTERAAASLLRTIVQIIHTCHSMG 200
+V+L G ++ + ++ E A G L + + H + + + + + + + S
Sbjct: 65 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 124
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-R 256
+HRDL N L+ ++ +K +DFGLS + E + VGS + + PEVL
Sbjct: 125 FLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS 180
Query: 257 KYGPEADIWSIGVMLY-ILLCGVPPF 281
K+ ++DIW+ GV+++ I G P+
Sbjct: 181 KFSSKSDIWAFGVLMWEIYSLGKMPY 206
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+ G+ +G G FG +KG + + ++ + EV ++ T N
Sbjct: 39 TVGQRIGSGSFG----TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 93
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRI-IAKGHYTERAAASLLRTIVQIIHTCHSMG 200
I+ G Y K + +V + C G L+ + I + + + R Q + H+
Sbjct: 94 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 152
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSV---FYKQGEVFKDIVGSAYYIAPEVL--- 254
+IHRDLK N L E+ +K DFGL+ + F+ + GS ++APEV+
Sbjct: 153 IIHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 255 -KRKYGPEADIWSIGVMLYILLCGVPPF 281
K Y ++D+++ G++LY L+ G P+
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 16/206 (7%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+F KELG GQFG+ +G A K I + + E IE E ++M +L+ +
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQ-YDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHE-K 65
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGH-YTERAAASLLRTIVQIIHTCHSMG 200
+V+L G ++ + ++ E A G L + + H + + + + + + + S
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-R 256
+HRDL N L+ ++ +K +DFGLS + E + VGS + + PEVL
Sbjct: 126 FLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS 181
Query: 257 KYGPEADIWSIGVMLY-ILLCGVPPF 281
K+ ++DIW+ GV+++ I G P+
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 112/272 (41%), Gaps = 16/272 (5%)
Query: 72 RPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQ 131
R E + G+ +G GQFG H + I K + + + +
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 132 IMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQ 191
+ P+IV+L G + V ++MELC GEL R + ASL+ Q
Sbjct: 63 LTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGEL--RSFLQVRKFSLDLASLILYAYQ 119
Query: 192 I---IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGS--A 246
+ + S +HRD+ N L+ N +K DFGLS + + K G
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTXXKASKGKLPI 176
Query: 247 YYIAPEVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGHIDFTSDP 304
++APE + R++ +D+W GV ++ IL+ GV PF + + I G + P
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERLPMP 234
Query: 305 WPSISPQAKDLVKKMLNSDPKQRLTATEVLAH 336
P+ P L+ K DP +R TE+ A
Sbjct: 235 -PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 265
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+ G+ +G G FG +KG + + ++ + EV ++ T N
Sbjct: 31 TVGQRIGSGSFG----TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 85
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRI-IAKGHYTERAAASLLRTIVQIIHTCHSMG 200
I+ G Y K + +V + C G L+ + I + + + R Q + H+
Sbjct: 86 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 144
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSV---FYKQGEVFKDIVGSAYYIAPEVL--- 254
+IHRDLK N L E+ +K DFGL+ + F+ + GS ++APEV+
Sbjct: 145 IIHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 201
Query: 255 -KRKYGPEADIWSIGVMLYILLCGVPPF 281
K Y ++D+++ G++LY L+ G P+
Sbjct: 202 DKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 16/206 (7%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+F KELG GQFG+ +G A K I + + E IE E ++M +L+ +
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQ-YDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHE-K 60
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGH-YTERAAASLLRTIVQIIHTCHSMG 200
+V+L G ++ + ++ E A G L + + H + + + + + + + S
Sbjct: 61 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 120
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-R 256
+HRDL N L+ ++ +K +DFGLS + E + VGS + + PEVL
Sbjct: 121 FLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS 176
Query: 257 KYGPEADIWSIGVMLY-ILLCGVPPF 281
K+ ++DIW+ GV+++ I G P+
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMPY 202
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+ G+ +G G FG +KG + + ++ + EV ++ T N
Sbjct: 11 TVGQRIGSGSFG----TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 65
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRI-IAKGHYTERAAASLLRTIVQIIHTCHSMG 200
I+ G Y K + +V + C G L+ + I + + + R Q + H+
Sbjct: 66 ILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSV---FYKQGEVFKDIVGSAYYIAPEVL--- 254
+IHRDLK N L E+ +K DFGL+ + F+ + GS ++APEV+
Sbjct: 125 IIHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 255 -KRKYGPEADIWSIGVMLYILLCGVPPF 281
K Y ++D+++ G++LY L+ G P+
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 74
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSMGVI 202
G + ++++E G L D + + + E +A LL QI + I
Sbjct: 75 LGVCTREPPFYIIIEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HRDL N L+ EN +K DFGLS G+ + G+ + + APE L K+
Sbjct: 134 HRDLAARNCLV---GENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 85 KELGRGQFG-ITHLC---THKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
++LG G FG ++ C T+ GTG+ A K + + + ++E+ I+ L +
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KADAGPQHRSGWKQEIDILRTLYHE- 93
Query: 141 NIVELKGAYEDK--QSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC-- 196
+I++ KG ED S+ LVME G L D Y R + L + ++ C
Sbjct: 94 HIIKYKGCCEDAGAASLQLVMEYVPLGSLRD-------YLPRHSIGLAQLLLFAQQICEG 146
Query: 197 ----HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQG----EVFKDIVGSAYY 248
H+ IHRDL N LL D + +K DFGL+ +G V +D ++
Sbjct: 147 MAYLHAQHYIHRDLAARNVLL---DNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFW 203
Query: 249 IAPEVLKR-KYGPEADIWSIGVMLYILL 275
APE LK K+ +D+WS GV LY LL
Sbjct: 204 YAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 16/206 (7%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+F KELG GQFG+ +G A K I + + E IE E ++M +L+ +
Sbjct: 18 TFLKELGTGQFGVVKYGKWRGQ-YDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHE-K 71
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGH-YTERAAASLLRTIVQIIHTCHSMG 200
+V+L G ++ + ++ E A G L + + H + + + + + + + S
Sbjct: 72 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 131
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-R 256
+HRDL N L+ ++ +K +DFGLS + E + VGS + + PEVL
Sbjct: 132 FLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS 187
Query: 257 KYGPEADIWSIGVMLY-ILLCGVPPF 281
K+ ++DIW+ GV+++ I G P+
Sbjct: 188 KFSSKSDIWAFGVLMWEIYSLGKMPY 213
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 74
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSM---GVI 202
G + ++++E G L D + + + E +A LL QI + I
Sbjct: 75 LGVCTREPPFYIIIEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HRDL N L+ EN +K DFGLS G+ + G+ + + APE L K+
Sbjct: 134 HRDLAARNCLV---GENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 375 IAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADG 434
+A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 435 NGTIDYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
NGTID+ EF+T + D EE + AF+ FDKD +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 68 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 124
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 125 MIREADIDGDGQVNYEEFV 143
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 49 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 106
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGNGTI
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 439 DYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
D+ EF+T + D EE + AF+ FDKD +
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 364
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 334 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 390
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 391 MIREADIDGDGQVNYEEFV 409
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 315 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 372
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGNGTI
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 439 DYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
D+ EF+T + D EE + AF+ FDKD +
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 364
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 334 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 390
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 391 MIREADIDGDGQVNYEEFV 409
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 315 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 372
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGNGTI
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 439 DYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
D+ EF+T + D EE + AF+ FDKD +
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 398
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 368 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 425 MIREADIDGDGQVNYEEFV 443
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 349 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 406
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGNGTI
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 439 DYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
D+ EF+T + D EE + AF+ FDKD +
Sbjct: 365 DFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGN 398
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 368 EFLTMMARWMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 425 MIREADIDGDGQVNYEEFV 443
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A+ SE E ++ D DGNG I E
Sbjct: 349 LQDMINEVDADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAEL 406
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGNGTI
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 365
Query: 439 DYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
D+ EF+T + D EE + AF+ FDKD +
Sbjct: 366 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 399
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 369 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 425
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 426 MIREADIDGDGQVNYEEFV 444
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 350 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 407
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGNGTI
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 439 DYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
D+ EF+T + D EE + AF+ FDKD +
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN 398
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 380 SEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTID 439
SEEEI +E F+ D D +G I+ EL+ + G KL++ E +++ AD DG+G ++
Sbjct: 382 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 438
Query: 440 YHEFI 444
Y EF+
Sbjct: 439 YEEFV 443
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 349 LQDMINEVDADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAEL 406
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 79
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSMGVI 202
G + +++ E G L D + + + E +A LL QI + I
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 138
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HRDL N L+ EN +K DFGLS G+ + G+ + + APE L K+
Sbjct: 139 HRDLAARNCLV---GENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGNGTI
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 439 DYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
D+ EF+T + D EE + AF+ FDKD +
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 398
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 368 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 425 MIREADIDGDGQVNYEEFV 443
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 349 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 406
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGNGTI
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 327
Query: 439 DYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
D+ EF+T + D EE + AF+ FDKD +
Sbjct: 328 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 361
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 331 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 387
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 388 MIREADIDGDGQVNYEEFV 406
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 312 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 369
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 122/280 (43%), Gaps = 32/280 (11%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTGQ 139
GK LGRG FG G + C+T+A + L + + E++I+ H+
Sbjct: 33 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 140 PNIVELKGA-YEDKQSVHLVMELCAGGELFDRIIAKGH----YTERAAASLLRTIVQIIH 194
N+V L GA + + +++E C G L + +K + Y E A L + + + H
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKE-APEDLYKDFLTLEH 151
Query: 195 -TCHSMGV------------IHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFK 240
C+S V IHRDL N LL E + +K DFGL+ YK + +
Sbjct: 152 LICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVR 208
Query: 241 --DIVGSAYYIAPE-VLKRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRG 296
D ++APE + R Y ++D+WS GV+L+ I G P+ F L+
Sbjct: 209 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 268
Query: 297 HIDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAH 336
+ + +P+ + + +P QR T +E++ H
Sbjct: 269 GTRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 74
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSMGVI 202
G + +++ E G L D + + + E +A LL QI + I
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HRDL N L+ EN +K DFGLS G+ + G+ + + APE L K+
Sbjct: 134 HRDLAARNCLV---GENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 74
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSMGVI 202
G + +++ E G L D + + + E +A LL QI + I
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HRDL N L+ EN +K DFGLS G+ + G+ + + APE L K+
Sbjct: 134 HRDLAARNCLV---GENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 375 IAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADG 434
+A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 435 NGTIDYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
NGTID+ EF+T + D EE + AF+ FDKD +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 68 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 426 LMEAADADGNGTIDYHEFIT 445
++ AD DG+G ++Y EF+T
Sbjct: 125 MIREADIDGDGQVNYEEFVT 144
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 49 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL 106
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 375 IAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADG 434
+A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 435 NGTIDYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
NGTID+ EF+T + D EE + AF+ FDKD +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 68 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 124
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 125 MIREADIDGDGQVNYEEFV 143
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 49 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 106
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 375 IAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADG 434
+A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 435 NGTIDYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
NGTID+ EF+T + D EE + AF+ FDKD +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E Q
Sbjct: 68 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQ 124
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 125 MIREADIDGDGQVNYEEFV 143
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 49 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 106
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 375 IAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADG 434
+A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 435 NGTIDYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
NGTID+ EF+T + D EE + AF+ FDKD +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 68 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 124
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 125 MIREADIDGDGQVNYEEFV 143
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 49 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 106
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 375 IAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADG 434
+A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 435 NGTIDYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
NGTID+ EF+T + D EE + AF+ FDKD +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 68 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 426 LMEAADADGNGTIDYHEFIT 445
++ +D DG+G ++Y EF+T
Sbjct: 125 MIRESDIDGDGQVNYEEFVT 144
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 49 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL 106
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 375 IAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADG 434
+A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 435 NGTIDYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
NGTID+ EF+T + D EE + AF+ FDKD +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 68 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 124
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 125 MIREADIDGDGQVNYEEFV 143
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 49 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 106
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 93/212 (43%), Gaps = 31/212 (14%)
Query: 84 GKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDI------EDVRREVQIMHHLT 137
G + G G FG+ + T T+A +KL DI + +E+++
Sbjct: 27 GNKXGEGGFGVVYKGYVNNT-------TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQ 79
Query: 138 GQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIA-------KGHYTERAAASLLRTIV 190
+ N+VEL G D + LV G L DR+ H + A I
Sbjct: 80 HE-NLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGI- 137
Query: 191 QIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGL---SVFYKQGEVFKDIVGSAY 247
+H H IHRD+K N LL DE K +DFGL S + Q IVG+
Sbjct: 138 NFLHENHH---IHRDIKSANILL---DEAFTAKISDFGLARASEKFAQXVXXSRIVGTTA 191
Query: 248 YIAPEVLKRKYGPEADIWSIGVMLYILLCGVP 279
Y APE L+ + P++DI+S GV+L ++ G+P
Sbjct: 192 YXAPEALRGEITPKSDIYSFGVVLLEIITGLP 223
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 39/226 (17%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTGQ 139
FGK LG G FG T G G++ A +A + L + ++ E + E++IM HL
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 101
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK---------GHYTE-RAAASLLRTI 189
NIV L GA V ++ E C G+L + + K G E R +
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 190 VQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYI 249
Q + S IHRD+ N LL N K DFGL+ +DI+ + YI
Sbjct: 162 AQGMAFLASKNCIHRDVAARNVLLTN---GHVAKIGDFGLA---------RDIMNDSNYI 209
Query: 250 ------------APE-VLKRKYGPEADIWSIGVMLY-ILLCGVPPF 281
APE + Y ++D+WS G++L+ I G+ P+
Sbjct: 210 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 255
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 436 GTIDYHEFITATMHLNRM-DREEHLYTAFQHFDKDNS 471
GTID+ EF+ TM +M D EE + AF+ FDKD +
Sbjct: 61 GTIDFPEFL--TMMARKMKDSEEEIREAFRVFDKDGN 95
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 380 SEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTID 439
SEEEI +E F+ D D +G I+ EL+ + G KL++ E +++ AD DG+G ++
Sbjct: 79 SEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 135
Query: 440 YHEFIT 445
Y EF+T
Sbjct: 136 YEEFVT 141
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ K SE E ++ D DGNG I E
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLTMMARK-MKDSEEEIREAFRVFDKDGNGFISAAEL 103
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 375 IAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADG 434
+A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 435 NGTIDYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
NGTID+ EF+T + D EE + AF+ FDKD +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 68 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 426 LMEAADADGNGTIDYHEFIT 445
++ AD DG+G ++Y EF+T
Sbjct: 125 MIREADIDGDGQVNYEEFVT 144
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 49 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL 106
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 374 VIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADAD 433
+A L+EE+I KE F D D GTIT +EL + G +E E + ++ DAD
Sbjct: 3 AMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 62
Query: 434 GNGTIDYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
GNGTID+ EF+T + D EE + AF+ FDKD +
Sbjct: 63 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 101
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 71 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 127
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 128 MIREADIDGDGQVNYEEFV 146
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 52 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 109
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 375 IAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADG 434
+A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADG
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 435 NGTIDYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
NGTID+ EF+T + D EE + AF+ FDKD +
Sbjct: 62 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 99
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 69 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 125
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 126 MIREADIDGDGQVNYEEFV 144
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 50 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 107
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 79
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSMGVI 202
G + ++++E G L D + + + E A LL QI + I
Sbjct: 80 LGVCTREPPFYIIIEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HRDL N L+ EN +K DFGLS G+ + G+ + + APE L K+
Sbjct: 139 HRDLAARNCLV---GENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 39/226 (17%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTGQ 139
FGK LG G FG T G G++ A +A + L + ++ E + E++IM HL
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK---------GHYTE-RAAASLLRTI 189
NIV L GA V ++ E C G+L + + K G E R +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 190 VQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYI 249
Q + S IHRD+ N LL N K DFGL+ +DI+ + YI
Sbjct: 170 AQGMAFLASKNCIHRDVAARNVLLTN---GHVAKIGDFGLA---------RDIMNDSNYI 217
Query: 250 ------------APE-VLKRKYGPEADIWSIGVMLY-ILLCGVPPF 281
APE + Y ++D+WS G++L+ I G+ P+
Sbjct: 218 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 263
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 35/261 (13%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNI 142
G+++GRG FG + A K+ R+ + + +E +I+ + PNI
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSC--RETLPPDLKAKFLQEARILKQYS-HPNI 174
Query: 143 VELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQII-------HT 195
V L G KQ +++VMEL GG+ + +G A ++T++Q++
Sbjct: 175 VRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG------ARLRVKTLLQMVGDAAAGMEY 228
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS------VFYKQGEVFKDIVGSAYYI 249
S IHRDL N L+ K+ LK +DFG+S V G + + V +
Sbjct: 229 LESKCCIHRDLAARNCLVTEKNV---LKISDFGMSREEADGVXAASGGLRQVPVK---WT 282
Query: 250 APEVLKR-KYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPS 307
APE L +Y E+D+WS G++L+ G P+ S + +G P P
Sbjct: 283 APEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKG----GRLPCPE 338
Query: 308 ISPQAK-DLVKKMLNSDPKQR 327
+ P A L+++ +P QR
Sbjct: 339 LCPDAVFRLMEQCWAYEPGQR 359
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 29/242 (11%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFA--CKTIAKRKL---VNKEDIEDVRREVQIMHHL 136
+ GK LG G FG + G + T+A + L +ED+ D+ E+++M +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMI 97
Query: 137 TGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKG----------------HYTER 180
NI+ L GA +++++E + G L + + A+ T +
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 181 AAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFK 240
S + + + S IHRDL N L+ EN+ +K DFGL+ + +K
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNIDYYK 214
Query: 241 DIVGS---AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILR 295
++APE L R Y ++D+WS GV+++ I G P+ +F +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
Query: 296 GH 297
GH
Sbjct: 275 GH 276
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+ G+ +G G FG +KG + + ++ + EV ++ T N
Sbjct: 11 TVGQRIGSGSFG----TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 65
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRI-IAKGHYTERAAASLLRTIVQIIHTCHSMG 200
I+ G Y + +V + C G L+ + I + + + R Q + H+
Sbjct: 66 ILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVF---YKQGEVFKDIVGSAYYIAPEVL--- 254
+IHRDLK N L E+ +K DFGL+ + F+ + GS ++APEV+
Sbjct: 125 IIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 255 -KRKYGPEADIWSIGVMLYILLCGVPPF 281
K Y ++D+++ G++LY L+ G P+
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 75
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSMGVI 202
G + +++ E G L D + + + E A LL QI + I
Sbjct: 76 LGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 134
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HRDL N L+ EN +K DFGLS G+ + G+ + + APE L K+
Sbjct: 135 HRDLAARNCLV---GENHLVKVADFGLSRL-MTGDTYTAPAGAKFPIKWTAPESLAYNKF 190
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 436 GTIDYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
GTID+ EF+T + D EE + AF+ FDKD +
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 67 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 426 LMEAADADGNGTIDYHEFIT 445
++ AD DG+G ++Y EF+T
Sbjct: 124 MIREADIDGDGQVNYEEFVT 143
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL 105
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 436 GTIDYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
GTID+ EF+T + D EE + AF+ FDKD +
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 67 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 426 LMEAADADGNGTIDYHEFIT 445
++ AD DG+G ++Y EF+T
Sbjct: 124 MIREADIDGDGQVNYEEFVT 143
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL 105
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 17/208 (8%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+ G+ +G G FG +KG + + ++ + EV ++ T N
Sbjct: 27 TVGQRIGSGSFG----TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVN 81
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIA-KGHYTERAAASLLRTIVQIIHTCHSMG 200
I+ G Y + +V + C G L+ + A + + + + R + + H+
Sbjct: 82 ILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS 140
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSV---FYKQGEVFKDIVGSAYYIAPEVLKRK 257
+IHRDLK N L E++ +K DFGL+ + F+ + GS ++APEV++ +
Sbjct: 141 IIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 258 ----YGPEADIWSIGVMLYILLCGVPPF 281
Y ++D+++ G++LY L+ G P+
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 436 GTIDYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
GTID+ EF+T + D EE + AF+ FDKD +
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 67 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 426 LMEAADADGNGTIDYHEFI 444
++ A+ DG+G ++Y EF+
Sbjct: 124 MIREANIDGDGQVNYEEFV 142
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 76
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSMGVI 202
G + +++ E G L D + + + E A LL QI + I
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 135
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HRDL N L+ EN +K DFGLS G+ + G+ + + APE L K+
Sbjct: 136 HRDLAARNCLV---GENHLVKVADFGLSRL-MTGDTYTAPAGAKFPIKWTAPESLAYNKF 191
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQFG + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 72
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSMGVI 202
G + +++ E G L D + + + E +A LL QI + I
Sbjct: 73 LGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 131
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HRDL N L+ EN +K DFGLS G+ G+ + + APE L K+
Sbjct: 132 HRDLAARNCLV---GENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYNKF 187
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 22/221 (9%)
Query: 87 LGRGQFGITHLCTH----KGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNI 142
+G G+FG +C+ G + F K K+ D E IM PN+
Sbjct: 15 IGAGEFG--EVCSGHLKLPGKREIFVAIKTLKSGYTEKQR-RDFLSEASIMGQFD-HPNV 70
Query: 143 VELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRTIVQIIHTCHSMG 200
+ L+G V ++ E G L D + + G +T +LR I + M
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN 129
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYK---QGEVFKDIVGSAY---YIAPEVL 254
+HR L N L+ + N K +DFGLS F + + +G + APE +
Sbjct: 130 YVHRALAARNILV---NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 255 K-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAI 293
+ RK+ +D+WS G++++ ++ G P+W + + NAI
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI 227
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 98/232 (42%), Gaps = 45/232 (19%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTGQ 139
FGK LG G FG T G G++ A +A + L + ++ E + E++IM HL
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK-----------GHYTERAAAS---- 184
NIV L GA V ++ E C G+L + + K H E +S
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 185 -LLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
+ Q + S IHRD+ N LL N K DFGL+ +DI+
Sbjct: 170 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTN---GHVAKIGDFGLA---------RDIM 217
Query: 244 GSAYYI------------APE-VLKRKYGPEADIWSIGVMLY-ILLCGVPPF 281
+ YI APE + Y ++D+WS G++L+ I G+ P+
Sbjct: 218 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 269
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 436 GTIDYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
GTID+ EF+T + D EE + AF+ FDKD +
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G L++ E +
Sbjct: 68 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDE 124
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 125 MIREADIDGDGQVNYEEFV 143
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 49 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 106
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 436 GTIDYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
GTID+ EF+T + D EE + AF+ FDKD +
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G L++ E +
Sbjct: 67 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDE 123
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 124 MIREADIDGDGQVNYEEFV 142
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 105
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 436 GTIDYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
GTID+ EF+T + D EE + AF+ FDKD +
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 67 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 124 MIREADIDGDGQVNYEEFV 142
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 105
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 76
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSMGVI 202
G + +++ E G L D + + + E A LL QI + I
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 135
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HRDL N L+ EN +K DFGLS G+ + G+ + + APE L K+
Sbjct: 136 HRDLAARNCLV---GENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKF 191
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGN
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 66
Query: 436 GTIDYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
GTID+ EF+T + D EE + AF+ FDKD +
Sbjct: 67 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 103
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 73 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 129
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 130 MIREADIDGDGQVNYEEFV 148
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 54 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 111
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 29/242 (11%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFA--CKTIAKRKL---VNKEDIEDVRREVQIMHHL 136
+ GK LG G FG + G + T+A + L ++D+ D+ E+++M +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 137 TGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKG----------------HYTER 180
NI+ L GA +++++E + G L + + A+ T +
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 181 AAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFK 240
S + + + S IHRDL N L+ EN+ +K DFGL+ + +K
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNIDYYK 214
Query: 241 DIVGS---AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILR 295
+ ++APE L R Y ++D+WS GV+++ I G P+ +F +
Sbjct: 215 NTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
Query: 296 GH 297
GH
Sbjct: 275 GH 276
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 436 GTIDYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
GTID+ EF+T + D EE + AF+ FDKD +
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 67 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 124 MIREADIDGDGQVNYEEFV 142
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 105
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 87
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSMGVI 202
G + +++ E G L D + + + E A LL QI + I
Sbjct: 88 LGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 146
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HRDL N L+ EN +K DFGLS G+ + G+ + + APE L K+
Sbjct: 147 HRDLAARNCLV---GENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKF 202
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 203 SIKSDVWAFGVLLWEIATYGMSPY 226
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 79
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSMGVI 202
G + +++ E G L D + + + E A LL QI + I
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HRDL N L+ EN +K DFGLS G+ + G+ + + APE L K+
Sbjct: 139 HRDLAARNCLV---GENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+F KELG GQFG+ +G A K I + + E IE E ++M +L+ +
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQ-YDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHE-K 80
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGH-YTERAAASLLRTIVQIIHTCHSMG 200
+V+L G ++ + ++ E A G L + + H + + + + + + + S
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-R 256
+HRDL N L+ ++ +K +DFGLS + E VGS + + PEVL
Sbjct: 141 FLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEETSS-VGSKFPVRWSPPEVLMYS 196
Query: 257 KYGPEADIWSIGVMLY-ILLCGVPPF 281
K+ ++DIW+ GV+++ I G P+
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 76
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSMGVI 202
G + +++ E G L D + + + E A LL QI + I
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 135
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HRDL N L+ EN +K DFGLS G+ + G+ + + APE L K+
Sbjct: 136 HRDLAARNCLV---GENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKF 191
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 79
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSMGVI 202
G + +++ E G L D + + + E A LL QI + I
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HRDL N L+ EN +K DFGLS G+ + G+ + + APE L K+
Sbjct: 139 HRDLAARNCLV---GENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 74
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSMGVI 202
G + +++ E G L D + + + E A LL QI + I
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 133
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HRDL N L+ EN +K DFGLS G+ + G+ + + APE L K+
Sbjct: 134 HRDLAARNCLV---GENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 69/121 (57%), Gaps = 2/121 (1%)
Query: 350 LDNAVLSRLKQFKAMNKFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQ 409
+D VL K + M +F+K+A+ +IA ++ ++ LK F +D + G IT +L++
Sbjct: 20 IDIHVLENFKNYALMLRFQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRK 79
Query: 410 GLAKQGTKLSEYEAKQLMEAADADGNGTIDYHEFITATMHLNRMDREEHLYTAFQHFDKD 469
GL + G L L++ D+DG+G IDY EF+ A + ++ + + +Y AF+ FD D
Sbjct: 80 GLERSGLMLPP-NFDLLLDQIDSDGSGNIDYTEFLAAAIDRRQLSK-KLIYCAFRVFDVD 137
Query: 470 N 470
N
Sbjct: 138 N 138
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 391 FKSIDTDNSGTITLEELKQGL---AKQG--TKLSEYEAKQLMEAADADGNGTIDYHEF 443
F+ D DN G IT EL L K+G T+ + K+++ D +G+G ID++EF
Sbjct: 131 FRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEF 188
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 78
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSMGVI 202
G + +++ E G L D + + + E A LL QI + I
Sbjct: 79 LGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 137
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HRDL N L+ EN +K DFGLS G+ + G+ + + APE L K+
Sbjct: 138 HRDLAARNCLV---GENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKF 193
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 194 SIKSDVWAFGVLLWEIATYGMSPY 217
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 113/273 (41%), Gaps = 50/273 (18%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
+G G FG H+ G+ + K + K + E REV+ + L NIV
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRV-------KYNNEKAEREVKALAKL-DHVNIVHYN 70
Query: 147 GAYE----------------DKQSVHLVMELCAGGELFDRI-IAKGHYTERAAA-SLLRT 188
G ++ + + + ME C G L I +G ++ A L
Sbjct: 71 GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQ 130
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYY 248
I + + HS +I+RDLKP N L++ +K DFGL K G+ Y
Sbjct: 131 ITKGVDYIHSKKLINRDLKPSNIFLVD---TKQVKIGDFGLVTSLKNDGKRXRSKGTLRY 187
Query: 249 IAPE-VLKRKYGPEADIWSIGVMLYILL--CG----VPPFWAESEHGIFNAILRGHIDFT 301
++PE + + YG E D++++G++L LL C F+ + GI + I
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIF------- 240
Query: 302 SDPWPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
+ K L++K+L+ P+ R +E+L
Sbjct: 241 -------DKKEKTLLQKLLSKKPEDRPNTSEIL 266
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 281
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSM---GVI 202
G + +++ E G L D + + + E +A LL QI + I
Sbjct: 282 LGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 340
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HR+L N L+ EN +K DFGLS G+ + G+ + + APE L K+
Sbjct: 341 HRNLAARNCLV---GENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKF 396
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 397 SIKSDVWAFGVLLWEIATYGMSPY 420
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 121/279 (43%), Gaps = 30/279 (10%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTGQ 139
GK LGRG FG G + C+T+A + L + + E++I+ H+
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 140 PNIVELKGA-YEDKQSVHLVMELCAGGELFDRIIAKGHY---TERAAASLLRTIVQIIH- 194
N+V L GA + + +++E C G L + +K + + A L + + + H
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 195 TCHSMGV------------IHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFK- 240
C+S V IHRDL N LL E + +K DFGL+ YK + +
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDXVRK 207
Query: 241 -DIVGSAYYIAPE-VLKRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
D ++APE + R Y ++D+WS GV+L+ I G P+ F L+
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 267
Query: 298 IDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAH 336
+ + +P+ + + +P QR T +E++ H
Sbjct: 268 TRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 121/279 (43%), Gaps = 30/279 (10%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTGQ 139
GK LGRG FG G + C+T+A + L + + E++I+ H+
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 140 PNIVELKGA-YEDKQSVHLVMELCAGGELFDRIIAKGHY---TERAAASLLRTIVQIIH- 194
N+V L GA + + +++E C G L + +K + + A L + + + H
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 195 TCHSMGV------------IHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFK- 240
C+S V IHRDL N LL E + +K DFGL+ YK + +
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVRK 207
Query: 241 -DIVGSAYYIAPE-VLKRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
D ++APE + R Y ++D+WS GV+L+ I G P+ F L+
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 267
Query: 298 IDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAH 336
+ + +P+ + + +P QR T +E++ H
Sbjct: 268 TRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 72
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSMGVI 202
G + ++++E G L D + + + E +A LL QI + I
Sbjct: 73 LGVCTREPPFYIIIEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 131
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HRDL N L+ EN +K DFGLS G+ G+ + + APE L K+
Sbjct: 132 HRDLAARNCLV---GENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYNKF 187
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGNGTI
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 439 DYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
D+ EF+T + D EE + AF+ FDKD +
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 95
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 65 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 122 MIREADIDGDGQVNYEEFV 140
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 46 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 103
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGNGTI
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 439 DYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
D+ EF+T + D EE + AF+ FDKD +
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 94
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 64 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 120
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 121 MIREADIDGDGQVNYEEFV 139
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 45 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 102
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 74
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSM---GVI 202
G + +++ E G L D + + + E A LL QI + I
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 133
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HRDL N L+ EN +K DFGLS G+ + G+ + + APE L K+
Sbjct: 134 HRDLAARNCLV---GENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D D GTIT +EL + G +E E + ++ DADG+GTI
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 439 DYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
D+ EF+T + D EE + AF+ FDKD +
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN 397
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 367 EFLTMMARKMKYTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 424 MIREADIDGDGQVNYEEFV 442
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D GTI E +A++ SE E ++ D DGNG I E
Sbjct: 348 LQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAEL 405
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 30/79 (37%)
Query: 391 FKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTIDYHEFITATMHL 450
K ID G I +L+ L Q T+ E K+ D DG+GTI E T L
Sbjct: 280 LKGIDFKEDGNILGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 339
Query: 451 NRMDREEHLYTAFQHFDKD 469
+ E L D D
Sbjct: 340 GQNPTEAELQDMINEVDAD 358
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 21/255 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G ++ K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 93
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSM---GVI 202
G + ++V E G L D + + + E A LL QI + I
Sbjct: 94 LGVCTLEPPFYIVTEYMPYGNLLD-YLRECNREEVTAVVLLYMATQISSAMEYLEKKNFI 152
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HRDL N L+ EN +K DFGLS G+ + G+ + + APE L +
Sbjct: 153 HRDLAARNCLV---GENHVVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNTF 208
Query: 259 GPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKDLVK 317
++D+W+ GV+L+ I G+ P+ +++ + +G+ + P P+ +L++
Sbjct: 209 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCP---PKVYELMR 265
Query: 318 KMLNSDPKQRLTATE 332
P R + E
Sbjct: 266 ACWKWSPADRPSFAE 280
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGNGTI
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 439 DYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
D+ EF+T + D EE + AF+ FDKD +
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 95
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 65 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 122 MIREADIDGDGQVNYEEFV 140
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 46 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 103
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+ ++E F DTD SGTI +ELK + G + + E K+++ D DG+GTI
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 439 DYHEFIT-ATMHLNRMDREEHLYTAFQHFDKDNS 471
D+ EF+T T + D E + AF+ FD DNS
Sbjct: 82 DFEEFLTMMTAKMGERDSREEILKAFRLFDDDNS 115
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 380 SEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTID 439
S EEI+ + F+ D DNSGTIT+++L++ + G L+E E ++++ AD + + ID
Sbjct: 99 SREEIL---KAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEID 155
Query: 440 YHEFI 444
EFI
Sbjct: 156 EDEFI 160
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 369 KVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEE-LKQGLAKQGTKLSEYEAKQLM 427
KVA+R + +EEI K+M ID D SGTI EE L AK G + S E +
Sbjct: 51 KVAMRALGFEPKKEEI---KKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAF 107
Query: 428 EAADADGNGTIDYHEFITATMHLNRMDREEHLYTAFQHFDKDN 470
D D +GTI + L EE L D+++
Sbjct: 108 RLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRND 150
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D D GTIT +EL + G +E E + ++ DADG+GTI
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 439 DYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
D+ EF+T + D EE + AF+ FDKD +
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN 397
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 380 SEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTID 439
SEEEI +E F+ D D +G I+ EL+ + G KL++ E +++ AD DG+G ++
Sbjct: 381 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 437
Query: 440 YHEFI 444
Y EF+
Sbjct: 438 YEEFV 442
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D GTI E +A++ SE E ++ D DGNG I E
Sbjct: 348 LQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAEL 405
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 30/79 (37%)
Query: 391 FKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTIDYHEFITATMHL 450
K ID G I +L+ L Q T+ E K+ D DG+GTI E T L
Sbjct: 280 LKGIDFKEDGNILGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 339
Query: 451 NRMDREEHLYTAFQHFDKD 469
+ E L D D
Sbjct: 340 GQNPTEAELQDMINEVDAD 358
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D D GTIT +EL + G +E E + ++ DADG+GTI
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 364
Query: 439 DYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
D+ EF+T + D EE + AF+ FDKD +
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN 398
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 380 SEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTID 439
SEEEI +E F+ D D +G I+ EL+ + G KL++ E +++ AD DG+G ++
Sbjct: 382 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 438
Query: 440 YHEFI 444
Y EF+
Sbjct: 439 YEEFV 443
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D GTI E +A++ SE E ++ D DGNG I E
Sbjct: 349 LQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAEL 406
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGNGTI
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 62
Query: 439 DYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
D+ EF+T + D EE + AF+ FDKD +
Sbjct: 63 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 96
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 66 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 122
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 123 MIREADIDGDGQVNYEEFV 141
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 47 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 104
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 115/270 (42%), Gaps = 32/270 (11%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
Y F ++LG G F L G +A K I + ++D E+ +RE MH L P
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE---QQDREEAQREAD-MHRLFNHP 86
Query: 141 NIVEL-------KGAYEDKQSVHLVMELCAGGELFD---RIIAKGHY-TERAAASLLRTI 189
NI+ L +GA K L++ G L++ R+ KG++ TE LL I
Sbjct: 87 NILRLVAYCLRERGA---KHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGI 143
Query: 190 VQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFY----KQGEVFKDIVG- 244
+ + H+ G HRDLKP N LL ++ + + + + +Q +D
Sbjct: 144 CRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQ 203
Query: 245 --SAYYIAPEVLKRK----YGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAI-LRGH 297
+ Y APE+ + D+WS+G +LY ++ G P+ + G A+ ++
Sbjct: 204 RCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ 263
Query: 298 IDFTSDPWPSISPQAKDLVKKMLNSDPKQR 327
+ P S L+ M+ DP QR
Sbjct: 264 LSIPQS--PRHSSALWQLLNSMMTVDPHQR 291
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 121/279 (43%), Gaps = 30/279 (10%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTGQ 139
GK LGRG FG G + C+T+A + L + + E++I+ H+
Sbjct: 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 127
Query: 140 PNIVELKGA-YEDKQSVHLVMELCAGGELFDRIIAKGHY---TERAAASLLRTIVQIIH- 194
N+V L GA + + +++E C G L + +K + + A L + + + H
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 195 TCHSMGV------------IHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFK- 240
C+S V IHRDL N LL E + +K DFGL+ YK + +
Sbjct: 188 ICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVRK 244
Query: 241 -DIVGSAYYIAPE-VLKRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
D ++APE + R Y ++D+WS GV+L+ I G P+ F L+
Sbjct: 245 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 304
Query: 298 IDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAH 336
+ + +P+ + + +P QR T +E++ H
Sbjct: 305 TRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D D GTIT +EL + G +E E + ++ DADG+GTI
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 439 DYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
D+ EF+T + D EE + AF+ FDKD +
Sbjct: 364 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 397
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 367 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 424 MIREADIDGDGQVNYEEFV 442
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D GTI E +A++ SE E ++ D DGNG I E
Sbjct: 348 LQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 405
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
+F KELG GQFG+ +G A K I + + E IE E ++M +L+ +
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQ-YDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHE-K 65
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGH-YTERAAASLLRTIVQIIHTCHSMG 200
+V+L G ++ + ++ E A G L + + H + + + + + + + S
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-R 256
+HRDL N L+ ++ +K +DFGLS + E + GS + + PEVL
Sbjct: 126 FLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDE-YTSSRGSKFPVRWSPPEVLMYS 181
Query: 257 KYGPEADIWSIGVMLY-ILLCGVPPF 281
K+ ++DIW+ GV+++ I G P+
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 31/230 (13%)
Query: 85 KELGRGQFGITH---LCTHKGTGQ-QFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
K +G G+FG + L T G + A KT+ K K+ + D E IM +
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL-KAGYTEKQRV-DFLGEAGIMGQFSHH- 106
Query: 141 NIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRTIVQIIHTCHS 198
NI+ L+G + + ++ E G L D+ + + G ++ +LR I + +
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGAL-DKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN 165
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY----------Y 248
M +HRDL N L+ + N K +DFGLS V +D + Y +
Sbjct: 166 MNYVHRDLAARNILV---NSNLVCKVSDFGLS------RVLEDDPEATYTTSGGKIPIRW 216
Query: 249 IAPEVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRG 296
APE + RK+ +D+WS G++++ ++ G P+W S H + AI G
Sbjct: 217 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG 266
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGN
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 436 GTIDYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
GTID+ EF++ + D EE L AF+ FD+D +
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGN 97
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 380 SEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTID 439
SEEE++ E FK D D +G I+ EL+ + G KL++ E +++ AD DG+G I+
Sbjct: 81 SEEELI---EAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHIN 137
Query: 440 YHEFI 444
Y EF+
Sbjct: 138 YEEFV 142
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 114/267 (42%), Gaps = 25/267 (9%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+G G FG +KG I K E + R EV ++ T NI+
Sbjct: 43 RIGSGSFG----TVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRK-TRHVNILLF 97
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRI-IAKGHYTERAAASLLRTIVQIIHTCHSMGVIHR 204
G Y K ++ +V + C G L+ + + + + + R Q + H+ +IHR
Sbjct: 98 MG-YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHR 156
Query: 205 DLKPENFLLLNKDENSPLKATDFGLSVF---YKQGEVFKDIVGSAYYIAPEVLKRK---- 257
D+K N L E +K DFGL+ + + + GS ++APEV++ +
Sbjct: 157 DMKSNNIFL---HEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNP 213
Query: 258 YGPEADIWSIGVMLYILLCGVPPF-WAESEHGIFNAILRGHIDFTSDPWPSISPQA---- 312
+ ++D++S G++LY L+ G P+ + I + RG+ P+A
Sbjct: 214 FSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRL 273
Query: 313 -KDLVKKMLNSDP--KQRLTATEVLAH 336
D VKK+ P Q L++ E+L H
Sbjct: 274 VADCVKKVKEERPLFPQILSSIELLQH 300
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 75
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSMGVI 202
G + ++++E G L D + + + E A LL QI + I
Sbjct: 76 LGVCTREPPFYIIIEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 134
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HRDL N L+ EN +K DFGLS G+ G+ + + APE L K+
Sbjct: 135 HRDLAARNCLV---GENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYNKF 190
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 29/242 (11%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFA--CKTIAKRKL---VNKEDIEDVRREVQIMHHL 136
+ GK LG G FG + G + T+A + L ++D+ D+ E+++M +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 137 TGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKG----------------HYTER 180
NI+ L GA +++++E + G L + + A+ T +
Sbjct: 98 GKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 181 AAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFK 240
S + + + S IHRDL N L+ EN+ +K DFGL+ + +K
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNIDYYK 214
Query: 241 DIVGS---AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILR 295
++APE L R Y ++D+WS GV+++ I G P+ +F +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
Query: 296 GH 297
GH
Sbjct: 275 GH 276
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGN
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 436 GTIDYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
GTID+ EF++ + D EE L AF+ FD+D +
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGN 97
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 380 SEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTID 439
SEEE++ E FK D D +G I+ EL+ + G KL++ E +++ AD DG+G I+
Sbjct: 81 SEEELI---EAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHIN 137
Query: 440 YHEFI 444
Y EF+
Sbjct: 138 YEEFV 142
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 29/242 (11%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFA--CKTIAKRKL---VNKEDIEDVRREVQIMHHL 136
+ GK LG G FG + G + T+A + L ++D+ D+ E+++M +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 137 TGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKG----------------HYTER 180
NI+ L GA +++++E + G L + + A+ T +
Sbjct: 98 GKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 181 AAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFK 240
S + + + S IHRDL N L+ EN+ +K DFGL+ + +K
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNIDYYK 214
Query: 241 DIVGS---AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILR 295
++APE L R Y ++D+WS GV+++ I G P+ +F +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
Query: 296 GH 297
GH
Sbjct: 275 GH 276
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 120/279 (43%), Gaps = 30/279 (10%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTGQ 139
GK LGRG FG G + C+T+A + L + + E++I+ H+
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 140 PNIVELKGA-YEDKQSVHLVMELCAGGELFDRIIAKGHY---TERAAASLLRTIVQIIH- 194
N+V L GA + + ++ E C G L + +K + + A L + + + H
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 195 TCHSMGV------------IHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFK- 240
C+S V IHRDL N LL E + +K DFGL+ YK + +
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 241 -DIVGSAYYIAPE-VLKRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
D ++APE + R Y ++D+WS GV+L+ I G P+ F L+
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 258
Query: 298 IDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAH 336
+ + +P+ + + +P QR T +E++ H
Sbjct: 259 TRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 120/279 (43%), Gaps = 30/279 (10%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTGQ 139
GK LGRG FG G + C+T+A + L + + E++I+ H+
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 140 PNIVELKGA-YEDKQSVHLVMELCAGGELFDRIIAKGHY---TERAAASLLRTIVQIIH- 194
N+V L GA + + ++ E C G L + +K + + A L + + + H
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 195 TCHSMGV------------IHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFK- 240
C+S V IHRDL N LL E + +K DFGL+ YK + +
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 241 -DIVGSAYYIAPE-VLKRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
D ++APE + R Y ++D+WS GV+L+ I G P+ F L+
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 258
Query: 298 IDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAH 336
+ + +P+ + + +P QR T +E++ H
Sbjct: 259 TRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D D GTIT +EL + G +E E + ++ DADG+GTI
Sbjct: 296 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 355
Query: 439 DYHEF-ITATMHLNRMDREEHLYTAFQHFDKDNS 471
D+ EF I + D EE + AF+ FDKD +
Sbjct: 356 DFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGN 389
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 380 SEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTID 439
SEEEI +E F+ D D +G I+ EL+ + G KL++ E +++ AD DG+G ++
Sbjct: 373 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 429
Query: 440 YHEFI 444
Y EF+
Sbjct: 430 YEEFV 434
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D GTI E +A++ SE E ++ D DGNG I E
Sbjct: 340 LQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 397
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 29/242 (11%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFA--CKTIAKRKL---VNKEDIEDVRREVQIMHHL 136
+ GK LG G FG + G + T+A + L ++D+ D+ E+++M +
Sbjct: 30 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 89
Query: 137 TGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKG----------------HYTER 180
NI+ L GA +++++E + G L + + A+ T +
Sbjct: 90 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 181 AAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFK 240
S + + + S IHRDL N L+ EN+ +K DFGL+ + +K
Sbjct: 150 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNIDYYK 206
Query: 241 DIVGS---AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILR 295
++APE L R Y ++D+WS GV+++ I G P+ +F +
Sbjct: 207 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 266
Query: 296 GH 297
GH
Sbjct: 267 GH 268
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 278
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSM---GVI 202
G + +++ E G L D + + + E A LL QI + I
Sbjct: 279 LGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 337
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HR+L N L+ EN +K DFGLS G+ + G+ + + APE L K+
Sbjct: 338 HRNLAARNCLV---GENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKF 393
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 394 SIKSDVWAFGVLLWEIATYGMSPY 417
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 436 GTIDYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
GTID+ EF+T + D EE + AF+ FDKD +
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 67 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 124 MIREADIDGDGQVNYEEFV 142
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D GTI E +A++ SE E ++ D DGNG I E
Sbjct: 48 LQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 105
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 29/242 (11%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFA--CKTIAKRKL---VNKEDIEDVRREVQIMHHL 136
+ GK LG G FG + G + T+A + L ++D+ D+ E+++M +
Sbjct: 84 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 143
Query: 137 TGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKG----------------HYTER 180
NI+ L GA +++++E + G L + + A+ T +
Sbjct: 144 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 181 AAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFK 240
S + + + S IHRDL N L+ EN+ +K DFGL+ + +K
Sbjct: 204 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNIDYYK 260
Query: 241 DIVGS---AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILR 295
++APE L R Y ++D+WS GV+++ I G P+ +F +
Sbjct: 261 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 320
Query: 296 GH 297
GH
Sbjct: 321 GH 322
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A LSEE+I+ KE F D D G IT+EEL + +E E + ++ DADGN
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 436 GTIDYHEFIT-ATMHLNRMDREEHLYTAFQHFDKDNS 471
GTI++ EF++ + D EE L AF+ FDKD +
Sbjct: 61 GTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQN 97
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 365 NKFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAK 424
++F + + + +EEE LKE FK D D +G I+ EL+ + G KL++ E +
Sbjct: 66 DEFLSLMAKKVKDTDAEEE---LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVE 122
Query: 425 QLMEAADADGNGTIDYHEFITATMHL 450
Q+++ AD DG+G ++Y EF+ M +
Sbjct: 123 QMIKEADLDGDGQVNYEEFVKMMMTV 148
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 29/242 (11%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFA--CKTIAKRKL---VNKEDIEDVRREVQIMHHL 136
+ GK LG G FG + G + T+A + L ++D+ D+ E+++M +
Sbjct: 27 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 86
Query: 137 TGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKG----------------HYTER 180
NI+ L GA +++++E + G L + + A+ T +
Sbjct: 87 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 181 AAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFK 240
S + + + S IHRDL N L+ EN+ +K DFGL+ + +K
Sbjct: 147 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNIDYYK 203
Query: 241 DIVGS---AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILR 295
++APE L R Y ++D+WS GV+++ I G P+ +F +
Sbjct: 204 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 263
Query: 296 GH 297
GH
Sbjct: 264 GH 265
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 29/242 (11%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFA--CKTIAKRKL---VNKEDIEDVRREVQIMHHL 136
+ GK LG G FG + G + T+A + L ++D+ D+ E+++M +
Sbjct: 25 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 84
Query: 137 TGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKG----------------HYTER 180
NI+ L GA +++++E + G L + + A+ T +
Sbjct: 85 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 181 AAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFK 240
S + + + S IHRDL N L+ EN+ +K DFGL+ + +K
Sbjct: 145 DLVSCTYQLARGMEYLASQKCIHRDLTARNVLV---TENNVMKIADFGLARDINNIDYYK 201
Query: 241 DIVGS---AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILR 295
++APE L R Y ++D+WS GV+++ I G P+ +F +
Sbjct: 202 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 261
Query: 296 GH 297
GH
Sbjct: 262 GH 263
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 320
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSM---GVI 202
G + +++ E G L D + + + E A LL QI + I
Sbjct: 321 LGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 379
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HR+L N L+ EN +K DFGLS G+ + G+ + + APE L K+
Sbjct: 380 HRNLAARNCLV---GENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKF 435
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 436 SIKSDVWAFGVLLWEIATYGMSPY 459
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 97/227 (42%), Gaps = 30/227 (13%)
Query: 124 EDVRREVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGEL--FDRIIAKGHYTERA 181
D E IM PNI+ L+G + +V E G L F R G +T
Sbjct: 95 RDFLSEASIMGQFD-HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT-HDGQFTIMQ 152
Query: 182 AASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKD 241
+LR + + +G +HRDL N L+ D N K +DFGLS V +D
Sbjct: 153 LVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLS------RVLED 203
Query: 242 IVGSAY----------YIAPEVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGI 289
+AY + APE + R + +D+WS GV+++ +L G P+W + +
Sbjct: 204 DPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV 263
Query: 290 FNAILRGHIDFTSDPWPSISPQA-KDLVKKMLNSDPKQRLTATEVLA 335
+++ G+ P P P A L+ + D QR +++++
Sbjct: 264 ISSVEEGY----RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 103/242 (42%), Gaps = 29/242 (11%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFA--CKTIAKRKL---VNKEDIEDVRREVQIMHHL 136
+ GK LG G FG + G + T+A + L ++D+ D+ E+++M +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 137 TGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKG----------------HYTER 180
NI+ L GA +++++E + G L + + A+ T +
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 181 AAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFK 240
S + + + S IHRDL N L+ EN+ ++ DFGL+ + +K
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMRIADFGLARDINNIDYYK 214
Query: 241 DIVGS---AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILR 295
++APE L R Y ++D+WS GV+++ I G P+ +F +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
Query: 296 GH 297
GH
Sbjct: 275 GH 276
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 378 CLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGT 437
+EE+I KE F D D GTIT +EL + G +E E + ++ DADGNGT
Sbjct: 1 AATEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 438 IDYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
ID+ EF+T + D EE + AF+ FDKD +
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 95
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 65 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 122 MIREADIDGDGQVNYEEFV 140
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 46 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 103
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 65.9 bits (159), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/94 (40%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D D GTIT +EL G +E E + + DADGNGTI
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTI 63
Query: 439 DYHEFITATMHLNR-MDREEHLYTAFQHFDKDNS 471
++ EF+T + D EE + AF+ FDKD +
Sbjct: 64 NFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGN 97
Score = 48.9 bits (115), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 380 SEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTID 439
SEEEI +E F+ D D +G I+ EL+ G KL++ E + + AD DG+G ++
Sbjct: 81 SEEEI---REAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVN 137
Query: 440 YHEFI 444
Y EF+
Sbjct: 138 YEEFV 142
Score = 29.6 bits (65), Expect = 3.6, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEFIT 445
L++ +D D +GTI E A+ SE E ++ D DGNG I E
Sbjct: 48 LQDXINEVDADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRH 107
Query: 446 ATMHLNRMDREEHLYTAFQHFDKD 469
+L +E + + D D
Sbjct: 108 VXTNLGEKLTDEEVDEXIREADID 131
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L++E+I KE F D D GTIT +EL + G +E E + ++ DADGN
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 436 GTIDYHEFIT-ATMHLNRMDREEHLYTAFQHFDKDNS 471
GTID+ EF+ + D EE L AF+ FDKD +
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGN 97
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEE LKE F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 67 EFLNLMARKMKDTDSEEE---LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 426 LMEAADADGNGTIDYHEFITATM 448
++ AD DG+G ++Y EF+ M
Sbjct: 124 MIREADVDGDGQVNYEEFVQVMM 146
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E K+ D DGNG I E
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAEL 105
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG GQ+G + K A KT+ + + ++E+ +E +M + PN+V+L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 79
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSMGVI 202
G + +++ E G L D + + + E A LL QI + I
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 203 HRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEVLK-RKY 258
HRDL N L+ EN +K DFGLS G+ G+ + + APE L K+
Sbjct: 139 HRDLAARNCLV---GENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYNKF 194
Query: 259 GPEADIWSIGVMLY-ILLCGVPPF 281
++D+W+ GV+L+ I G+ P+
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 380 SEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTID 439
+EE+I KE F D D GTIT +EL + G +E E + ++ DADGNGTID
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 440 YHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
+ EF+T + D EE + AF+ FDKD +
Sbjct: 61 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 93
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 63 EFLTMMARKMKDTDSEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 119
Query: 426 LMEAADADGNGTIDYHEFI 444
++ AD DG+G ++Y EF+
Sbjct: 120 MIREADIDGDGQVNYEEFV 138
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E ++ D DGNG I E
Sbjct: 44 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 101
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L+EE+I KE F D D GTIT +EL G +E E + + DADGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 61
Query: 436 GTIDYHEFITATMHLNR-MDREEHLYTAFQHFDKDNS 471
GTID+ EF+T + D EE + AF+ FDKD +
Sbjct: 62 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGN 98
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 380 SEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTID 439
SEEEI +E F+ D D +G I+ EL+ G KL++ E Q + AD DG+G ++
Sbjct: 82 SEEEI---REAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVN 138
Query: 440 YHEFI 444
Y EF+
Sbjct: 139 YEEFV 143
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 98/239 (41%), Gaps = 52/239 (21%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTGQ 139
FGK LG G FG T G G++ A +A + L + ++ E + E++IM HL
Sbjct: 35 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 94
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELFDRI-----------IAKGHYTE--------- 179
NIV L GA V ++ E C G+L + + +A G E
Sbjct: 95 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 180 ---RAAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQG 236
R + Q + S IHRD+ N LL N K DFGL+
Sbjct: 155 LELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN---GHVAKIGDFGLA------ 205
Query: 237 EVFKDIVGSAYYI------------APE-VLKRKYGPEADIWSIGVMLY-ILLCGVPPF 281
+DI+ + YI APE + Y ++D+WS G++L+ I G+ P+
Sbjct: 206 ---RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 261
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L++E+I KE F D D GTIT +EL + G +E E + ++ DADGN
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 436 GTIDYHEFIT-ATMHLNRMDREEHLYTAFQHFDKDNS 471
GTID+ EF+ + D EE L AF+ FDKD +
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGN 97
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEE+ LKE F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 67 EFLNLMARKMKDTDSEEK---LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 426 LMEAADADGNGTIDYHEFITATM 448
++ AD DG+G ++Y EF+ M
Sbjct: 124 MIREADVDGDGQVNYEEFVQVMM 146
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE + K+ D DGNG I E
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAEL 105
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 102/242 (42%), Gaps = 29/242 (11%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFA--CKTIAKRKL---VNKEDIEDVRREVQIMHHL 136
+ GK LG G FG + G + T+A + L ++D+ D+ E+++M +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 137 TGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKG----------------HYTER 180
NI+ L GA +++++E + G L + + A+ T +
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 181 AAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFK 240
S + + + S IHRDL N L+ EN+ +K DFGL+ + K
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNIDXXK 214
Query: 241 DIVGS---AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILR 295
++APE L R Y ++D+WS GV+++ I G P+ +F +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
Query: 296 GH 297
GH
Sbjct: 275 GH 276
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 22/205 (10%)
Query: 85 KELGRGQFGITHLCTH----KGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
++LG G FG LC + TG+Q A K++ N I D+++E++I+ +L +
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH--IADLKKEIEILRNLYHE- 83
Query: 141 NIVELKG-AYED-KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
NIV+ KG ED + L+ME G L + + + L+ VQI
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQ--LKYAVQICKGMDY 141
Query: 199 MG---VIHRDLKPENFLLLNKDENSPLKATDFGLSVFY---KQGEVFKDIVGS-AYYIAP 251
+G +HRDL N L+ ++ + +K DFGL+ K+ KD S ++ AP
Sbjct: 142 LGSRQYVHRDLAARNVLVESEHQ---VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 198
Query: 252 EVL-KRKYGPEADIWSIGVMLYILL 275
E L + K+ +D+WS GV L+ LL
Sbjct: 199 ECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L+EE+I KE F D D GTIT +EL G +E E + + DADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 60
Query: 436 GTIDYHEFITATMHLNR-MDREEHLYTAFQHFDKDNS 471
GTID+ EF+T + D EE + AF+ FDKD +
Sbjct: 61 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGN 97
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 380 SEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTID 439
SEEEI +E F+ D D +G I+ EL+ G KL++ E + + AD DG+G ++
Sbjct: 81 SEEEI---REAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVN 137
Query: 440 YHEFI 444
Y EF+
Sbjct: 138 YEEFV 142
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 102/242 (42%), Gaps = 29/242 (11%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFA--CKTIAKRKL---VNKEDIEDVRREVQIMHHL 136
+ GK LG G FG + G + T+A + L ++D+ D+ E+++M +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 137 TGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKG----------------HYTER 180
NI+ L GA +++++E + G L + + A+ T +
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 181 AAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFK 240
S + + + S IHRDL N L+ EN+ +K DFGL+ + K
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNIDXXK 214
Query: 241 DIVGS---AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILR 295
++APE L R Y ++D+WS GV+++ I G P+ +F +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
Query: 296 GH 297
GH
Sbjct: 275 GH 276
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIE-DVRREVQIMHHLTGQPNIVE 144
+LG+G FG LC + G K+ + D + D +RE+QI+ L IV+
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSD-FIVK 75
Query: 145 LKGAY--EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG-- 200
+G +QS+ LVME G L D + H A+ LL QI +G
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRD--FLQRHRARLDASRLLLYSSQICKGMEYLGSR 133
Query: 201 -VIHRDLKPENFLLLNKDENSPLKATDFGLSVFY---KQGEVFKDIVGSA-YYIAPEVLK 255
+HRDL N L+ + + +K DFGL+ K V ++ S ++ APE L
Sbjct: 134 RCVHRDLAARNILV---ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 190
Query: 256 RK-YGPEADIWSIGVMLYILL 275
+ ++D+WS GV+LY L
Sbjct: 191 DNIFSRQSDVWSFGVVLYELF 211
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 22/205 (10%)
Query: 85 KELGRGQFGITHLCTH----KGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQP 140
++LG G FG LC + TG+Q A K++ N I D+++E++I+ +L +
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH--IADLKKEIEILRNLYHE- 71
Query: 141 NIVELKG-AYED-KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHS 198
NIV+ KG ED + L+ME G L + + + L+ VQI
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQ--LKYAVQICKGMDY 129
Query: 199 MG---VIHRDLKPENFLLLNKDENSPLKATDFGLSVFY---KQGEVFKDIVGS-AYYIAP 251
+G +HRDL N L+ ++ + +K DFGL+ K+ KD S ++ AP
Sbjct: 130 LGSRQYVHRDLAARNVLVESEHQ---VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 186
Query: 252 EVL-KRKYGPEADIWSIGVMLYILL 275
E L + K+ +D+WS GV L+ LL
Sbjct: 187 ECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L++E+I KE F D D GTIT +EL + G +E E + ++ DADGNGTI
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 439 DYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
D+ EF+ + D EE L AF+ FDKD +
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGN 94
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEE LKE F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 64 EFLNLMARKMKDTDSEEE---LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 120
Query: 426 LMEAADADGNGTIDYHEFITATM 448
++ AD DG+G ++Y EF+ M
Sbjct: 121 MIREADVDGDGQVNYEEFVQVMM 143
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ SE E K+ D DGNG I E
Sbjct: 45 LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAEL 102
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 107/230 (46%), Gaps = 16/230 (6%)
Query: 74 MEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIM 133
ME + + KELG GQFG+ L KG A K I + + E ++ + +++
Sbjct: 3 MELKREEITLLKELGSGQFGVVKLGKWKGQ-YDVAVKMIKEGSMSEDEFFQEAQTMMKLS 61
Query: 134 HHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAA-ASLLRTIVQI 192
H P +V+ G + +++V E + G L + + + G E + + + +
Sbjct: 62 H-----PKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEG 116
Query: 193 IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YI 249
+ S IHRDL N L+ D + +K +DFG++ Y + + VG+ + +
Sbjct: 117 MAFLESHQFIHRDLAARNCLV---DRDLCVKVSDFGMTR-YVLDDQYVSSVGTKFPVKWS 172
Query: 250 APEVLKR-KYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
APEV KY ++D+W+ G++++ + G P+ + + + +GH
Sbjct: 173 APEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGH 222
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIE-DVRREVQIMHHLTGQPNIVE 144
+LG+G FG LC + G K+ + D + D +RE+QI+ L IV+
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSD-FIVK 76
Query: 145 LKGAY--EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG-- 200
+G +QS+ LVME G L D + H A+ LL QI +G
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRD--FLQRHRARLDASRLLLYSSQICKGMEYLGSR 134
Query: 201 -VIHRDLKPENFLLLNKDENSPLKATDFGLSVFY---KQGEVFKDIVGSA-YYIAPEVLK 255
+HRDL N L+ + + +K DFGL+ K V ++ S ++ APE L
Sbjct: 135 RCVHRDLAARNILV---ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 191
Query: 256 RK-YGPEADIWSIGVMLYILL 275
+ ++D+WS GV+LY L
Sbjct: 192 DNIFSRQSDVWSFGVVLYELF 212
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 120/279 (43%), Gaps = 42/279 (15%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
+++G G+FG C + G +A K +K+ L D ++ REV L ++V
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 73
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAK----GHYTERAAASLLRTIVQIIHTCHSMG 200
A+ + + + E C GG L D I ++ E LL + + + HSM
Sbjct: 74 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 133
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFG-------LSVFYKQGEVFKDIV--------GS 245
++H D+KP N + + P A++ G V +K G++ G
Sbjct: 134 LVHMDIKPSNIFI--SRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGD 191
Query: 246 AYYIAPEVLKRKYG--PEADIWSIGVMLYILLCGVPPF------WAESEHGIFNAILRGH 297
+ ++A EVL+ Y P+ADI+++ + + + G P W E G I +
Sbjct: 192 SRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRLPRIPQ-- 248
Query: 298 IDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAH 336
+S + +L+K M++ DP++R +A ++ H
Sbjct: 249 ---------VLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 120/279 (43%), Gaps = 42/279 (15%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
+++G G+FG C + G +A K +K+ L D ++ REV L ++V
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 73
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAK----GHYTERAAASLLRTIVQIIHTCHSMG 200
A+ + + + E C GG L D I ++ E LL + + + HSM
Sbjct: 74 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 133
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFG-------LSVFYKQGEVFKDIV--------GS 245
++H D+KP N + + P A++ G V +K G++ G
Sbjct: 134 LVHMDIKPSNIFI--SRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGD 191
Query: 246 AYYIAPEVLKRKYG--PEADIWSIGVMLYILLCGVPPF------WAESEHGIFNAILRGH 297
+ ++A EVL+ Y P+ADI+++ + + + G P W E G I +
Sbjct: 192 SRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRLPRIPQ-- 248
Query: 298 IDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAH 336
+S + +L+K M++ DP++R +A ++ H
Sbjct: 249 ---------VLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 120/279 (43%), Gaps = 29/279 (10%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTG 138
+ GK LGRG FG G + C+T+A + L + + E++I+ H+
Sbjct: 31 NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 139 QPNIVELKGA-YEDKQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLRTIVQIIH- 194
N+V L GA + + +++E C G L + +K + + L + + + H
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 195 TCHSMGV------------IHRDLKPENFLLLNKDENSPLKATDFGLS--VFYKQGEVFK 240
C+S V IHRDL N LL E + +K DFGL+ + V K
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 241 -DIVGSAYYIAPE-VLKRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
D ++APE + R Y ++D+WS GV+L+ I G P+ F L+
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 267
Query: 298 IDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAH 336
+ + +P+ + + +P QR T +E++ H
Sbjct: 268 TRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIE-DVRREVQIMHHLTGQPNIVE 144
+LG+G FG LC + G K+ + D + D +RE+QI+ L IV+
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSD-FIVK 88
Query: 145 LKGAY--EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG-- 200
+G +QS+ LVME G L D + + H A+ LL QI +G
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLGSR 146
Query: 201 -VIHRDLKPENFLLLNKDENSPLKATDFGLSVFY---KQGEVFKDIVGSA-YYIAPEVLK 255
+HRDL N L+ + + +K DFGL+ K V ++ S ++ APE L
Sbjct: 147 RCVHRDLAARNILV---ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 203
Query: 256 RK-YGPEADIWSIGVMLYILL 275
+ ++D+WS GV+LY L
Sbjct: 204 DNIFSRQSDVWSFGVVLYELF 224
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 120/279 (43%), Gaps = 42/279 (15%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
+++G G+FG C + G +A K +K+ L D ++ REV L ++V
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 71
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAK----GHYTERAAASLLRTIVQIIHTCHSMG 200
A+ + + + E C GG L D I ++ E LL + + + HSM
Sbjct: 72 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 131
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFG-------LSVFYKQGEVFKDIV--------GS 245
++H D+KP N + + P A++ G V +K G++ G
Sbjct: 132 LVHMDIKPSNIFI--SRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGD 189
Query: 246 AYYIAPEVLKRKYG--PEADIWSIGVMLYILLCGVPPF------WAESEHGIFNAILRGH 297
+ ++A EVL+ Y P+ADI+++ + + + G P W E G I +
Sbjct: 190 SRFLANEVLQENYTHLPKADIFALALTV-VXAAGAEPLPRNGDQWHEIRQGRLPRIPQ-- 246
Query: 298 IDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAH 336
+S + +L+K M++ DP++R +A ++ H
Sbjct: 247 ---------VLSQEFTELLKVMIHPDPERRPSAMALVKH 276
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 120/279 (43%), Gaps = 42/279 (15%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
+++G G+FG C + G +A K +K+ L D ++ REV L ++V
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 75
Query: 145 LKGAYEDKQSVHLVMELCAGGELFDRIIAK----GHYTERAAASLLRTIVQIIHTCHSMG 200
A+ + + + E C GG L D I ++ E LL + + + HSM
Sbjct: 76 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 135
Query: 201 VIHRDLKPENFLLLNKDENSPLKATDFG-------LSVFYKQGEVFKDIV--------GS 245
++H D+KP N + + P A++ G V +K G++ G
Sbjct: 136 LVHMDIKPSNIFI--SRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGD 193
Query: 246 AYYIAPEVLKRKYG--PEADIWSIGVMLYILLCGVPPF------WAESEHGIFNAILRGH 297
+ ++A EVL+ Y P+ADI+++ + + + G P W E G I +
Sbjct: 194 SRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRLPRIPQ-- 250
Query: 298 IDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAH 336
+S + +L+K M++ DP++R +A ++ H
Sbjct: 251 ---------VLSQEFTELLKVMIHPDPERRPSAMALVKH 280
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 29/241 (12%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKT--IAKRKL---VNKEDIEDVRREVQIMHHLT 137
GK LG G FG L G + + +A + L ++D+ D+ E+++M +
Sbjct: 21 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 80
Query: 138 GQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK-----------GHYTERAAAS-- 184
NI+ L GA +++++E + G L + + A+ H E +S
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 185 LLRTIVQI---IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKD 241
L+ Q+ + S IHRDL N L+ E++ +K DFGL+ + +K
Sbjct: 141 LVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYKK 197
Query: 242 IVGS---AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRG 296
++APE L R Y ++D+WS GV+L+ I G P+ +F + G
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 257
Query: 297 H 297
H
Sbjct: 258 H 258
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 29/241 (12%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKT--IAKRKL---VNKEDIEDVRREVQIMHHLT 137
GK LG G FG L G + + +A + L ++D+ D+ E+++M +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 138 GQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK-----------GHYTERAAAS-- 184
NI+ L GA +++++E + G L + + A+ H E +S
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 185 LLRTIVQI---IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKD 241
L+ Q+ + S IHRDL N L+ E++ +K DFGL+ + +K
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYKK 208
Query: 242 IVGS---AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRG 296
++APE L R Y ++D+WS GV+L+ I G P+ +F + G
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 268
Query: 297 H 297
H
Sbjct: 269 H 269
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 29/242 (11%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFA--CKTIAKRKL---VNKEDIEDVRREVQIMHHL 136
+ GK LG G FG + G + T+A + L ++D+ D+ E+++M +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 137 TGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKG----------------HYTER 180
NI+ L GA +++++ + G L + + A+ T +
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 181 AAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFK 240
S + + + S IHRDL N L+ EN+ +K DFGL+ + +K
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNIDYYK 214
Query: 241 DIVGS---AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILR 295
++APE L R Y ++D+WS GV+++ I G P+ +F +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
Query: 296 GH 297
GH
Sbjct: 275 GH 276
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 29/241 (12%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKT--IAKRKL---VNKEDIEDVRREVQIMHHLT 137
GK LG G FG L G + + +A + L ++D+ D+ E+++M +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 138 GQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK-----------GHYTERAAAS-- 184
NI+ L GA +++++E + G L + + A+ H E +S
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 185 LLRTIVQI---IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKD 241
L+ Q+ + S IHRDL N L+ E++ +K DFGL+ + +K
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYKK 208
Query: 242 IVGS---AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRG 296
++APE L R Y ++D+WS GV+L+ I G P+ +F + G
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 268
Query: 297 H 297
H
Sbjct: 269 H 269
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 114/268 (42%), Gaps = 16/268 (5%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNI 142
F E+GRG F + T + A + RKL E + + E + + L PNI
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSER-QRFKEEAEXLKGLQ-HPNI 87
Query: 143 VELKGAYED----KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIV---QIIHT 195
V ++E K+ + LV EL G L + + S R I+ Q +HT
Sbjct: 88 VRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHT 147
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLK 255
+ +IHRDLK +N + +K D GL+ K+ K ++G+ + APE +
Sbjct: 148 -RTPPIIHRDLKCDNIFITGP--TGSVKIGDLGLATL-KRASFAKAVIGTPEFXAPEXYE 203
Query: 256 RKYGPEADIWSIG-VMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKD 314
KY D+++ G L P ++ I+ + G + D P+ K+
Sbjct: 204 EKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFD--KVAIPEVKE 261
Query: 315 LVKKMLNSDPKQRLTATEVLAHPWIKED 342
+++ + + +R + ++L H + +E+
Sbjct: 262 IIEGCIRQNKDERYSIKDLLNHAFFQEE 289
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 29/241 (12%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKT--IAKRKL---VNKEDIEDVRREVQIMHHLT 137
GK LG G FG L G + + +A + L ++D+ D+ E+++M +
Sbjct: 24 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 83
Query: 138 GQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK-----------GHYTERAAAS-- 184
NI+ L GA +++++E + G L + + A+ H E +S
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 185 LLRTIVQI---IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKD 241
L+ Q+ + S IHRDL N L+ E++ +K DFGL+ + +K
Sbjct: 144 LVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYKK 200
Query: 242 IVGS---AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRG 296
++APE L R Y ++D+WS GV+L+ I G P+ +F + G
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 260
Query: 297 H 297
H
Sbjct: 261 H 261
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 29/241 (12%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKT--IAKRKL---VNKEDIEDVRREVQIMHHLT 137
GK LG G FG L G + + +A + L ++D+ D+ E+++M +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 138 GQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK-----------GHYTERAAAS-- 184
NI+ L GA +++++E + G L + + A+ H E +S
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 185 LLRTIVQI---IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKD 241
L+ Q+ + S IHRDL N L+ E++ +K DFGL+ + +K
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYKK 208
Query: 242 IVGS---AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRG 296
++APE L R Y ++D+WS GV+L+ I G P+ +F + G
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 268
Query: 297 H 297
H
Sbjct: 269 H 269
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 29/241 (12%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKT--IAKRKL---VNKEDIEDVRREVQIMHHLT 137
GK LG G FG L G + + +A + L ++D+ D+ E+++M +
Sbjct: 25 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 84
Query: 138 GQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK-----------GHYTERAAAS-- 184
NI+ L GA +++++E + G L + + A+ H E +S
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 185 LLRTIVQI---IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKD 241
L+ Q+ + S IHRDL N L+ E++ +K DFGL+ + +K
Sbjct: 145 LVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYKK 201
Query: 242 IVGS---AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRG 296
++APE L R Y ++D+WS GV+L+ I G P+ +F + G
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 261
Query: 297 H 297
H
Sbjct: 262 H 262
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 75/140 (53%), Gaps = 13/140 (9%)
Query: 340 KEDG-EAPDVPLDNAVLSRLKQFKAMNKFKKVALRVIAGCL-SEEEIMGLKEMFKSIDTD 397
KE G E P L NA+ +++F+ K + AL +A L S+EE L ++F+ ID +
Sbjct: 19 KESGIELP--SLANAI-ENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKN 75
Query: 398 NSGTITLEELKQGLAK-QGTKLS-------EYEAKQLMEAADADGNGTIDYHEFITATMH 449
G + +EL G +K G +++ E E ++ AAD D NG IDY EF+T M
Sbjct: 76 GDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMD 135
Query: 450 LNRMDREEHLYTAFQHFDKD 469
+ ++ L +AFQ FD+D
Sbjct: 136 RKSLLSKDKLESAFQKFDQD 155
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQ--GLAKQGTKLSEYEAKQLMEAADADGNGTIDYHEF 443
L+ F+ D D +G I+++EL GL L K+++ D++ +G +D+ EF
Sbjct: 145 LESAFQKFDQDGNGKISVDELASVFGL----DHLESKTWKEMISGIDSNNDGDVDFEEF 199
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 14/222 (6%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRK-LVNKEDIEDVRREVQIMHHLTGQ 139
Y +G+G FG + + A K I +K +N+ IE E+ H +
Sbjct: 37 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMK 96
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC--- 196
IV LK + + + LV E+ + L+D + + + +L R Q + T
Sbjct: 97 YYIVHLKRHFMFRNHLCLVFEMLSYN-LYD--LLRNTNFRGVSLNLTRKFAQQMCTALLF 153
Query: 197 ---HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV 253
+ +IH DLKPEN LL N + S +K DFG S + G+ + S +Y +PEV
Sbjct: 154 LATPELSIIHCDLKPENILLCNP-KRSAIKIVDFGSSC--QLGQRIYQXIQSRFYRSPEV 210
Query: 254 -LKRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL 294
L Y D+WS+G +L + G P F +E N I+
Sbjct: 211 LLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 252
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 313 KDLVKKMLNSDPKQRLTATEVLAHPWIKEDGE 344
KDL+ +ML+ DPK R+ L H + K+ +
Sbjct: 331 KDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 362
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 113/286 (39%), Gaps = 63/286 (22%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
+G G FG H+ G+ + + + K + E REV+ + L NIV
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRV-------KYNNEKAEREVKALAKL-DHVNIVHYN 71
Query: 147 GAYE-----------------------------DKQSVHLVMELCAGGELFDRI-IAKGH 176
G ++ + + + ME C G L I +G
Sbjct: 72 GCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 131
Query: 177 YTERAAA-SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQ 235
++ A L I + + HS +IHRDLKP N L++ +K DFGL K
Sbjct: 132 KLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVD---TKQVKIGDFGLVTSLKN 188
Query: 236 GEVFKDIVGSAYYIAPE-VLKRKYGPEADIWSIGVMLYILL--CG----VPPFWAESEHG 288
G+ Y++PE + + YG E D++++G++L LL C F+ + G
Sbjct: 189 DGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDG 248
Query: 289 IFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVL 334
I + I + K L++K+L+ P+ R +E+L
Sbjct: 249 IISDIF--------------DKKEKTLLQKLLSKKPEDRPNTSEIL 280
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 29/241 (12%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKT--IAKRKL---VNKEDIEDVRREVQIMHHLT 137
GK LG G FG L G + + +A + L ++D+ D+ E+++M +
Sbjct: 17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 76
Query: 138 GQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK-----------GHYTERAAAS-- 184
NI+ L GA +++++E + G L + + A+ H E +S
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 185 LLRTIVQI---IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKD 241
L+ Q+ + S IHRDL N L+ E++ +K DFGL+ + +K
Sbjct: 137 LVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYKK 193
Query: 242 IVGS---AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRG 296
++APE L R Y ++D+WS GV+L+ I G P+ +F + G
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 253
Query: 297 H 297
H
Sbjct: 254 H 254
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 14/222 (6%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRK-LVNKEDIEDVRREVQIMHHLTGQ 139
Y +G+G FG + + A K I +K +N+ IE E+ H +
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMK 115
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC--- 196
IV LK + + + LV E+ + L+D + + + +L R Q + T
Sbjct: 116 YYIVHLKRHFMFRNHLCLVFEMLSYN-LYD--LLRNTNFRGVSLNLTRKFAQQMCTALLF 172
Query: 197 ---HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV 253
+ +IH DLKPEN LL N + S +K DFG S + G+ + S +Y +PEV
Sbjct: 173 LATPELSIIHCDLKPENILLCNP-KRSAIKIVDFGSSC--QLGQRIYQXIQSRFYRSPEV 229
Query: 254 -LKRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL 294
L Y D+WS+G +L + G P F +E N I+
Sbjct: 230 LLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 313 KDLVKKMLNSDPKQRLTATEVLAHPWIKEDGE 344
KDL+ +ML+ DPK R+ L H + K+ +
Sbjct: 350 KDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 381
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 64.3 bits (155), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE++ KE F D D G IT EL + G +E E + +M D DGNGT+
Sbjct: 4 LTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTV 63
Query: 439 DYHEFI-TATMHLNRMDREEHLYTAFQHFDKDNS 471
D+ EF+ + D EE + AF+ FDKD +
Sbjct: 64 DFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGN 97
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 380 SEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTID 439
+EEEI +E F+ D D +G ++ EL+ + + G KLS+ E +++ AAD DG+G ++
Sbjct: 81 NEEEI---REAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVN 137
Query: 440 YHEFI 444
Y EF+
Sbjct: 138 YEEFV 142
Score = 31.2 bits (69), Expect = 1.3, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKL-SEYEAKQLMEAADADGNGTIDYHEFIT 445
L++M ID D +GT+ E +A++ +E E ++ D DGNG + E
Sbjct: 48 LRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRH 107
Query: 446 ATMHLNRMDREEHLYTAFQHFDKD 469
L +E + + D D
Sbjct: 108 VMTRLGEKLSDEEVDEMIRAADTD 131
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 29/241 (12%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKT--IAKRKL---VNKEDIEDVRREVQIMHHLT 137
GK LG G FG L G + + +A + L ++D+ D+ E+++M +
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 132
Query: 138 GQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK-----------GHYTERAAAS-- 184
NI+ L GA +++++E + G L + + A+ H E +S
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 185 LLRTIVQI---IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKD 241
L+ Q+ + S IHRDL N L+ E++ +K DFGL+ + +K
Sbjct: 193 LVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYKK 249
Query: 242 IVGS---AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRG 296
++APE L R Y ++D+WS GV+L+ I G P+ +F + G
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 309
Query: 297 H 297
H
Sbjct: 310 H 310
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 120/279 (43%), Gaps = 30/279 (10%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTGQ 139
GK LGRG FG G + C+T+A + L + + E++I+ H+
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 140 PNIVELKGA-YEDKQSVHLVMELCAGGELFDRIIAKGHY---TERAAASLLRTIVQIIH- 194
N+V L GA + + +++E C G L + +K + + A L + + + H
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 195 TCHSMGV------------IHRDLKPENFLLLNKDENSPLKATDFGLS--VFYKQGEVFK 240
C+S V IHRDL N LL E + +K DFGL+ + V K
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 241 -DIVGSAYYIAPE-VLKRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
D ++APE + R Y ++D+WS GV+L+ I G P+ F L+
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 267
Query: 298 IDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAH 336
+ + +P+ + + +P QR T +E++ H
Sbjct: 268 TRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 139/362 (38%), Gaps = 98/362 (27%)
Query: 71 GRPMEDVKA--TYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRR 128
G +++VK Y +GRG +G +L K + A K + R + D + + R
Sbjct: 18 GAIIKNVKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKV-NRMFEDLIDCKRILR 76
Query: 129 EVQIMHHLTGQPNIVELKGAY--EDK---QSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
E+ I++ L I+ L ED +++V+E+ A +L TE+
Sbjct: 77 EITILNRLKSD-YIIRLHDLIIPEDLLKFDELYIVLEI-ADSDLKKLFKTPIFLTEQHVK 134
Query: 184 SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFY---KQGEVFK 240
++L ++ H G+IHRDLKP N LL +++ +K DFGL+ K +
Sbjct: 135 TILYNLLLGEKFIHESGIIHRDLKPANCLL---NQDCSVKICDFGLARTINSDKDIHIVN 191
Query: 241 DI-----------------------VGSAYYIAPE--VLKRKYGPEADIWSIGVML---- 271
D+ V + +Y APE +L+ Y DIWS G +
Sbjct: 192 DLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
Query: 272 -------------YILLCGVPPFWAESEHG---------------IFNAI---------- 293
+ L G F +H IFN I
Sbjct: 252 NMMKSHINNPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKC 311
Query: 294 --------------LRGHIDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWI 339
R ID S + SIS + DL++ ML + ++R+T + L+HP++
Sbjct: 312 ITKQEVIKYIKLFPTRDGIDL-SKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYL 370
Query: 340 KE 341
K+
Sbjct: 371 KD 372
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 29/242 (11%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFA--CKTIAKRKL---VNKEDIEDVRREVQIMHHL 136
+ GK LG G FG + G + T+A + L ++D+ D+ E+++M +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 137 TGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKG----------------HYTER 180
NI+ L GA +++++ + G L + + A+ T +
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 181 AAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFK 240
S + + + S IHRDL N L+ EN+ +K DFGL+ + +K
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNIDYYK 214
Query: 241 DIVGS---AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILR 295
++APE L R Y ++D+WS GV+++ I G P+ +F +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
Query: 296 GH 297
GH
Sbjct: 275 GH 276
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 120/279 (43%), Gaps = 30/279 (10%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTGQ 139
GK LGRG FG G + C+T+A + L + + E++I+ H+
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 140 PNIVELKGA-YEDKQSVHLVMELCAGGELFDRIIAKGHY---TERAAASLLRTIVQIIH- 194
N+V L GA + + +++E C G L + +K + + A L + + + H
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 195 TCHSMGV------------IHRDLKPENFLLLNKDENSPLKATDFGLS--VFYKQGEVFK 240
C+S V IHRDL N LL E + +K DFGL+ + V K
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 241 -DIVGSAYYIAPE-VLKRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
D ++APE + R Y ++D+WS GV+L+ I G P+ F L+
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 258
Query: 298 IDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAH 336
+ + +P+ + + +P QR T +E++ H
Sbjct: 259 TRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 375 IAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADG 434
+A L+E++I KE F D D G IT +EL + G +E E + ++ DADG
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 435 NGTIDYHEFIT-ATMHLNRMDREEHLYTAFQHFDKDNS 471
NGTID+ EF+ + D EE L AF+ FDKD +
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQN 98
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEE LKE F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 68 EFLNLMARKMKDTDSEEE---LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 426 LMEAADADGNGTIDYHEFITATM 448
++ AD DG+G I+Y EF+ M
Sbjct: 125 MIREADVDGDGQINYDEFVKVMM 147
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 18/221 (8%)
Query: 124 EDVRREVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGEL--FDRIIAKGHYTERA 181
D E IM PNI+ L+G + +V E G L F R G +T
Sbjct: 95 RDFLSEASIMGQFD-HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT-HDGQFTIMQ 152
Query: 182 AASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS-VFYKQGEVFK 240
+LR + + +G +HRDL N L+ D N K +DFGLS V +
Sbjct: 153 LVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDDPDAAX 209
Query: 241 DIVGSAY---YIAPEVLK-RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILR 295
G + APE + R + +D+WS GV+++ +L G P+W + + +++
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE 269
Query: 296 GHIDFTSDPWPSISPQA-KDLVKKMLNSDPKQRLTATEVLA 335
G+ P P P A L+ + D QR +++++
Sbjct: 270 GY----RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTGQ 139
GK LGRG FG G + C+T+A + L + + E++I+ H+
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 140 PNIVELKGA-YEDKQSVHLVMELCAGGELFDRIIAKGHY---TERAAASLLRTIVQIIH- 194
N+V L GA + + ++ E C G L + +K + + A L + + + H
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 195 TCHSMGV------------IHRDLKPENFLLLNKDENSPLKATDFGLS--VFYKQGEVFK 240
C+S V IHRDL N LL E + +K DFGL+ + V K
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 241 -DIVGSAYYIAPE-VLKRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGH 297
D ++APE + R Y ++D+WS GV+L+ I G P+ F L+
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 258
Query: 298 IDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAH 336
+ + +P+ + + +P QR T +E++ H
Sbjct: 259 TRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 29/241 (12%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKT--IAKRKL---VNKEDIEDVRREVQIMHHLT 137
GK LG G FG L G + + +A + L ++D+ D+ E+++M +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 138 GQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK-----------GHYTERAAAS-- 184
NI+ L GA +++++E + G L + + A+ H E +S
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 185 LLRTIVQI---IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKD 241
L+ Q+ + S IHRDL N L+ E++ +K DFGL+ + K
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDXXKK 208
Query: 242 IVGS---AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRG 296
++APE L R Y ++D+WS GV+L+ I G P+ +F + G
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 268
Query: 297 H 297
H
Sbjct: 269 H 269
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 118/276 (42%), Gaps = 34/276 (12%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNI 142
F +G G FG K G + ++ +K+D D E++++ L PNI
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 143 VELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTE--------RAAASLLRTIVQIIH 194
+ L GA E + ++L +E G L D + K E + AS L + Q++H
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAFAIANSTASTLSS-QQLLH 146
Query: 195 TCHSMG----------VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF-KDIV 243
+ IHRDL N L+ EN K DFGLS + EV+ K +
Sbjct: 147 FAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLS---RGQEVYVKKTM 200
Query: 244 GS--AYYIAPEVLKRK-YGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGHID 299
G ++A E L Y +D+WS GV+L+ I+ G P+ + ++ + +G
Sbjct: 201 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG--- 257
Query: 300 FTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLA 335
+ + + + DL+++ P +R + ++L
Sbjct: 258 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 293
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 63.2 bits (152), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D DN+G+I+ EL + G SE E LM D DGN I
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 439 DYHEFIT-ATMHLNRMDREEHLYTAFQHFDKD 469
++ EF+ + L D E+ L AF+ FDK+
Sbjct: 64 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKN 95
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 118/276 (42%), Gaps = 34/276 (12%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNI 142
F +G G FG K G + ++ +K+D D E++++ L PNI
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 143 VELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTE--------RAAASLLRTIVQIIH 194
+ L GA E + ++L +E G L D + K E + AS L + Q++H
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAFAIANSTASTLSS-QQLLH 136
Query: 195 TCHSMG----------VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF-KDIV 243
+ IHRDL N L+ EN K DFGLS + EV+ K +
Sbjct: 137 FAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLS---RGQEVYVKKTM 190
Query: 244 GS--AYYIAPEVLKRK-YGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGHID 299
G ++A E L Y +D+WS GV+L+ I+ G P+ + ++ + +G
Sbjct: 191 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG--- 247
Query: 300 FTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLA 335
+ + + + DL+++ P +R + ++L
Sbjct: 248 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 283
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 97/222 (43%), Gaps = 14/222 (6%)
Query: 81 YSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRK-LVNKEDIEDVRREVQIMHHLTGQ 139
Y +G+G FG + + A K I +K +N+ IE E+ H +
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMK 115
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTC--- 196
IV LK + + + LV E+ + L+D + + + +L R Q + T
Sbjct: 116 YYIVHLKRHFMFRNHLCLVFEMLSYN-LYD--LLRNTNFRGVSLNLTRKFAQQMCTALLF 172
Query: 197 ---HSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYYIAPEV 253
+ +IH DLKPEN LL N + +K DFG S + G+ + S +Y +PEV
Sbjct: 173 LATPELSIIHCDLKPENILLCNPKRXA-IKIVDFGSSC--QLGQRIYQXIQSRFYRSPEV 229
Query: 254 -LKRKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAIL 294
L Y D+WS+G +L + G P F +E N I+
Sbjct: 230 LLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 313 KDLVKKMLNSDPKQRLTATEVLAHPWIKEDGE 344
KDL+ +ML+ DPK R+ L H + K+ +
Sbjct: 350 KDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 381
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%)
Query: 380 SEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTID 439
+EE+I KE F D D GTIT +EL + G +E E + ++ DADGNGTID
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 440 YHEFITATMHLNRMDREEHLYTAFQHFDKDNS 471
+ EF+T + E + AF+ FDKD +
Sbjct: 61 FPEFLTMMARKMKDTDSEEIREAFRVFDKDGN 92
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEE ++E F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 63 EFLTMMARKMKDTDSEE----IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 118
Query: 426 LMEAADADGNGTIDYHEFI 444
++ A+ DG+G ++Y EF+
Sbjct: 119 MIREANIDGDGQVNYEEFV 137
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 387 LKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTIDYHEF 443
L++M +D D +GTI E +A++ E ++ D DGNG I E
Sbjct: 44 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAEL 100
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 375 IAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADG 434
+A L++++I KE F D D G IT +EL + G +E E + ++ DADG
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 435 NGTIDYHEFIT-ATMHLNRMDREEHLYTAFQHFDKDNS 471
NGTID+ EF+ + D EE L AF+ FDKD +
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQN 98
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEE LKE F+ D D +G I+ EL+ + G KL++ E +
Sbjct: 68 EFLNLMARKMKDTDSEEE---LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 426 LMEAADADGNGTIDYHEFITATM 448
++ AD DG+G I+Y EF+ M
Sbjct: 125 MIREADVDGDGQINYEEFVKVMM 147
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIE-DVRREVQIMHHLTGQPNIVE 144
+LG+G FG LC + G K+ + D + D +RE+QI+ L IV+
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSD-FIVK 72
Query: 145 LKGAY--EDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSMG-- 200
+G + + LVME G L D + H A+ LL QI +G
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRD--FLQRHRARLDASRLLLYSSQICKGMEYLGSR 130
Query: 201 -VIHRDLKPENFLLLNKDENSPLKATDFGLSVFY---KQGEVFKDIVGSA-YYIAPEVLK 255
+HRDL N L+ + + +K DFGL+ K V ++ S ++ APE L
Sbjct: 131 RCVHRDLAARNILV---ESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLS 187
Query: 256 RK-YGPEADIWSIGVMLYILL 275
+ ++D+WS GV+LY L
Sbjct: 188 DNIFSRQSDVWSFGVVLYELF 208
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D DNSG+I+ EL + G SE E LM D DGN I
Sbjct: 5 LTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAI 64
Query: 439 DYHEFIT-ATMHLNRMDREEHLYTAFQHFDKD 469
++ EF+ + L D E+ L AF+ FDK+
Sbjct: 65 EFSEFLALMSRQLKCNDSEQELLEAFKVFDKN 96
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 119/277 (42%), Gaps = 28/277 (10%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTG 138
+ GK LGRG FG G + +T+A + L + + E++I+ H+
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 139 QPNIVELKGA-YEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIH-TC 196
N+V L GA + + +++E C G L + +K + L + + + H C
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKDLYKDFLTLEHLIC 148
Query: 197 HSMGV------------IHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFK--D 241
+S V IHRDL N LL E + +K DFGL+ YK + + D
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVRKGD 205
Query: 242 IVGSAYYIAPE-VLKRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGHID 299
++APE + R Y ++D+WS GV+L+ I G P+ F L+
Sbjct: 206 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 265
Query: 300 FTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAH 336
+ + +P+ + + +P QR T +E++ H
Sbjct: 266 MRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D DN+G+I+ EL + G SE E LM D DGN I
Sbjct: 5 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 64
Query: 439 DYHEFIT-ATMHLNRMDREEHLYTAFQHFDKD 469
++ EF+ + L D E+ L AF+ FDK+
Sbjct: 65 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKN 96
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 77 VKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHL 136
V Y G+ +G G FG+ T+ QQ A K +R + + D R +++
Sbjct: 7 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGC 64
Query: 137 TGQPNIVELKGAYEDKQSVH--LVMELCAGGELFDRIIAKGH-YTERAAASLLRTIVQII 193
TG PN+ Y ++ +H LV++L G L D + G ++ + A + ++ +
Sbjct: 65 TGIPNVY-----YFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARV 118
Query: 194 HTCHSMGVIHRDLKPENFLL--LNKDENSPLKATDFGLSVFY-----KQGEVF---KDIV 243
+ H +++RD+KP+NFL+ N + + DFG+ FY KQ + K++
Sbjct: 119 QSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLS 178
Query: 244 GSAYYIAPEV-LKRKYGPEADIWSIG-VMLYILLCGVP 279
G+A Y++ L R+ D+ ++G V +Y L +P
Sbjct: 179 GTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLP 216
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 23/218 (10%)
Query: 77 VKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHL 136
V Y G+ +G G FG+ T+ QQ A K +R + + D R +++
Sbjct: 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGC 65
Query: 137 TGQPNIVELKGAYEDKQSVH--LVMELCAGGELFDRIIAKGH-YTERAAASLLRTIVQII 193
TG PN+ Y ++ +H LV++L G L D + G ++ + A + ++ +
Sbjct: 66 TGIPNVY-----YFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARV 119
Query: 194 HTCHSMGVIHRDLKPENFLL--LNKDENSPLKATDFGLSVFY-----KQGEVF---KDIV 243
+ H +++RD+KP+NFL+ N + + DFG+ FY KQ + K++
Sbjct: 120 QSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLS 179
Query: 244 GSAYYIAPEV-LKRKYGPEADIWSIG-VMLYILLCGVP 279
G+A Y++ L R+ D+ ++G V +Y L +P
Sbjct: 180 GTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLP 217
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 118/276 (42%), Gaps = 34/276 (12%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNI 142
F +G G FG K G + ++ +K+D D E++++ L PNI
Sbjct: 26 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 143 VELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTE--------RAAASLLRTIVQIIH 194
+ L GA E + ++L +E G L D + K E + AS L + Q++H
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAFAIANSTASTLSS-QQLLH 143
Query: 195 TCHSMG----------VIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVF-KDIV 243
+ IHR+L N L+ EN K DFGLS + EV+ K +
Sbjct: 144 FAADVARGMDYLSQKQFIHRNLAARNILV---GENYVAKIADFGLS---RGQEVYVKKTM 197
Query: 244 GS--AYYIAPEVLKRK-YGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGHID 299
G ++A E L Y +D+WS GV+L+ I+ G P+ + ++ + +G
Sbjct: 198 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG--- 254
Query: 300 FTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLA 335
+ + + + DL+++ P +R + ++L
Sbjct: 255 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 290
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 125/285 (43%), Gaps = 31/285 (10%)
Query: 70 LGRPMEDV---KATYSFGKELGRGQFGIT---HLCTHKGTGQQFACKTIAKRKLVNKEDI 123
L +EDV + ++ G+ LG+G+FG L G+ + A K + K ++ DI
Sbjct: 11 LKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML-KADIIASSDI 69
Query: 124 EDVRREVQIMHHLTGQPNIVELKGAYEDKQS------VHLVMELCAGGELFDRIIAKG-- 175
E+ RE M P++ +L G ++ +++ G+L ++A
Sbjct: 70 EEFLREAACMKEFD-HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIG 128
Query: 176 -HYTERAAASLLRTIVQI---IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV 231
+ +L+R +V I + S IHRDL N +L E+ + DFGLS
Sbjct: 129 ENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCML---AEDMTVCVADFGLSR 185
Query: 232 FYKQGEVFKDIVGSAY---YIAPEVLKRK-YGPEADIWSIGVMLY-ILLCGVPPFWAESE 286
G+ ++ S ++A E L Y +D+W+ GV ++ I+ G P+
Sbjct: 186 KIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN 245
Query: 287 HGIFNAILRGHIDFTSDPWPSISPQAKDLVKKMLNSDPKQRLTAT 331
I+N ++ G + P P + DL+ + ++DPKQR + T
Sbjct: 246 AEIYNYLIGG--NRLKQP-PECMEEVYDLMYQCWSADPKQRPSFT 287
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 436 GTIDYHEFITATMH-LNRMDREEHLYTAFQ 464
GTID+ EF+T + D EE + AF+
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFR 90
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 113/255 (44%), Gaps = 31/255 (12%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
+ +G+G+FG L ++G C + N + E +M L N+V+
Sbjct: 199 QTIGKGEFGDVMLGDYRGNKVAVKC-------IKNDATAQAFLAEASVMTQLR-HSNLVQ 250
Query: 145 LKGA-YEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSM---- 199
L G E+K +++V E A G L D + ++G + LL+ + + C +M
Sbjct: 251 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDV---CEAMEYLE 306
Query: 200 --GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVG-SAYYIAPEVLK- 255
+HRDL N L+ E++ K +DFGL+ K+ +D + APE L+
Sbjct: 307 GNNFVHRDLAARNVLV---SEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALRE 360
Query: 256 RKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQAKD 314
+K+ ++D+WS G++L+ I G P+ + + +G+ D P P D
Sbjct: 361 KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCP---PAVYD 417
Query: 315 LVKKMLNSDPKQRLT 329
++K + D R T
Sbjct: 418 VMKNCWHLDAATRPT 432
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 118/281 (41%), Gaps = 35/281 (12%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTG 138
SFGK LG G FG T G + A T+A + L + + E + E++++ +L
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRT-------- 188
NIV L GA ++ E C G+L + + K + + +++
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 189 --------IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFK 240
+ + + S IHRDL N LL K DFGL+ K +
Sbjct: 169 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILL---THGRITKICDFGLARHIKNDSNYV 225
Query: 241 DIVGSAY----YIAPE-VLKRKYGPEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAIL 294
+ G+A ++APE + Y E+D+WS G+ L+ L G P+ F ++
Sbjct: 226 -VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 284
Query: 295 RGHIDFTSDPWPSISP-QAKDLVKKMLNSDPKQRLTATEVL 334
+ S P +P + D++K ++DP +R T +++
Sbjct: 285 KEGFRMLS---PEHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 33/204 (16%)
Query: 152 KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHSMGVIHRDLKP 208
K +++ M+LC L D + + +R L +QI + HS G++HRDLKP
Sbjct: 133 KVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKP 192
Query: 209 ENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDI-------------VGSAYYIAPEVLK 255
N D +K DFGL Q E + + VG+ Y++PE +
Sbjct: 193 SNIFFTMDDV---VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIH 249
Query: 256 -RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSI----SP 310
Y + DI+S+G++L+ LL F + E +R D + +P + P
Sbjct: 250 GNNYSHKVDIFSLGLILFELLYS---FSTQMER------VRIITDVRNLKFPLLFTQKYP 300
Query: 311 QAKDLVKKMLNSDPKQRLTATEVL 334
Q +V+ ML+ P +R AT+++
Sbjct: 301 QEHMMVQDMLSPSPTERPEATDII 324
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 27/197 (13%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
+ +G+G+FG L ++G C + N + E +M L N+V+
Sbjct: 27 QTIGKGEFGDVMLGDYRGNKVAVKC-------IKNDATAQAFLAEASVMTQLR-HSNLVQ 78
Query: 145 LKGA-YEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSM---- 199
L G E+K +++V E A G L D + ++G + LL+ + + C +M
Sbjct: 79 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDV---CEAMEYLE 134
Query: 200 --GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVG-SAYYIAPEVLK- 255
+HRDL N L+ E++ K +DFGL+ K+ +D + APE L+
Sbjct: 135 GNNFVHRDLAARNVLV---SEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALRE 188
Query: 256 RKYGPEADIWSIGVMLY 272
+K+ ++D+WS G++L+
Sbjct: 189 KKFSTKSDVWSFGILLW 205
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 132/342 (38%), Gaps = 86/342 (25%)
Query: 71 GRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREV 130
G P +D A Y ++LG G F L A K + K V E ED E+
Sbjct: 13 GEPYKD--ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAED---EI 66
Query: 131 QIMHHLT----------GQPNIVELKGAYEDK--QSVHLVMELCAGGELFDRIIAKGH-- 176
+++ + G +I++L + K VH+VM GE +I K
Sbjct: 67 KLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHR 126
Query: 177 -----YTERAAASLLRTIVQIIHTCHSMGVIHRDLKPENFLL--LNKDEN-SPLKATDFG 228
Y ++ + LL + + C G+IH D+KPEN L+ ++ EN +K D G
Sbjct: 127 GIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSPENLIQIKIADLG 183
Query: 229 LSVFYKQGEVFKDIVGSAYYIAPEV-LKRKYGPEADIWSIGVMLYILLCGVPPFWAESEH 287
+ +Y E + + + + Y +PEV L +G ADIWS +++ L+ G F + H
Sbjct: 184 NACWYD--EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGH 241
Query: 288 G-------------------------------IFNA-----------------ILRGHID 299
FN+ +L
Sbjct: 242 SYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYK 301
Query: 300 FTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
F+ D IS D + ML DP++R A ++ HPW+K+
Sbjct: 302 FSKDEAKEIS----DFLSPMLQLDPRKRADAGGLVNHPWLKD 339
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 27/195 (13%)
Query: 87 LGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELK 146
+G+G+FG L ++G C + N + E +M L N+V+L
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKC-------IKNDATAQAFLAEASVMTQLR-HSNLVQLL 65
Query: 147 GA-YEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSM------ 199
G E+K +++V E A G L D + ++G + LL+ + + C +M
Sbjct: 66 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDV---CEAMEYLEGN 121
Query: 200 GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVG-SAYYIAPEVLK-RK 257
+HRDL N L+ E++ K +DFGL+ K+ +D + APE L+ +K
Sbjct: 122 NFVHRDLAARNVLV---SEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKK 175
Query: 258 YGPEADIWSIGVMLY 272
+ ++D+WS G++L+
Sbjct: 176 FSTKSDVWSFGILLW 190
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 132/342 (38%), Gaps = 86/342 (25%)
Query: 71 GRPMEDVKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREV 130
G P +D A Y ++LG G F L A K + K V E ED E+
Sbjct: 13 GEPYKD--ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAED---EI 66
Query: 131 QIMHHLT----------GQPNIVELKGAYEDK--QSVHLVMELCAGGELFDRIIAKGH-- 176
+++ + G +I++L + K VH+VM GE +I K
Sbjct: 67 KLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHR 126
Query: 177 -----YTERAAASLLRTIVQIIHTCHSMGVIHRDLKPENFLL--LNKDEN-SPLKATDFG 228
Y ++ + LL + + C G+IH D+KPEN L+ ++ EN +K D G
Sbjct: 127 GIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSPENLIQIKIADLG 183
Query: 229 LSVFYKQGEVFKDIVGSAYYIAPEV-LKRKYGPEADIWSIGVMLYILLCGVPPFWAESEH 287
+ +Y E + + + + Y +PEV L +G ADIWS +++ L+ G F + H
Sbjct: 184 NACWYD--EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGH 241
Query: 288 G-------------------------------IFNA-----------------ILRGHID 299
FN+ +L
Sbjct: 242 SYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYK 301
Query: 300 FTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
F+ D IS D + ML DP++R A ++ HPW+K+
Sbjct: 302 FSKDEAKEIS----DFLSPMLQLDPRKRADAGGLVNHPWLKD 339
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 115/278 (41%), Gaps = 67/278 (24%)
Query: 128 REVQIMHHLTGQPNIVELKGAY--EDKQSVHLVMELCAGGELFDRIIAKGHYTERA---- 181
RE+ ++ L PN++ L+ + + V L+ + A +L+ I K H +A
Sbjct: 67 REIALLRELK-HPNVISLQKVFLSHADRKVWLLFDY-AEHDLWH--IIKFHRASKANKKP 122
Query: 182 -------AASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNK-DENSPLKATDFGLSVFY 233
SLL I+ IH H+ V+HRDLKP N L++ + E +K D G + +
Sbjct: 123 VQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182
Query: 234 ----KQGEVFKDIVGSAYYIAPEVL--KRKYGPEADIWSIGVMLYILLCGVPPFWAESE- 286
K +V + +Y APE+L R Y DIW+IG + LL P F E
Sbjct: 183 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 242
Query: 287 ------------HGIFNAI-------------LRGHI----DFTSDPWPSIS-------- 309
IFN + + H DF + + + S
Sbjct: 243 IKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKH 302
Query: 310 ---PQAK--DLVKKMLNSDPKQRLTATEVLAHPWIKED 342
P +K L++K+L DP +R+T+ + + P+ ED
Sbjct: 303 KVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLED 340
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
+ L+EE+I KE F D DN+G+I+ EL + G SE E LM D DGN
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 436 GTIDYHEFIT-ATMHLNRMDREEHLYTAFQHFDKD 469
I++ EF+ + L D E+ L AF+ FDK+
Sbjct: 61 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKN 95
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 45/253 (17%)
Query: 126 VRREVQIMHHLTGQPNIVELKGAYE--DKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
V RE+++++H PNI+ L+ + ++ ++H +L EL +A+ + +R
Sbjct: 76 VLREIRLLNHF-HHPNILGLRDIFVHFEEPAMH---KLYLVTELMRTDLAQVIHDQRIVI 131
Query: 184 S------LLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGE 237
S + I+ +H H GV+HRDL P N LL +N+ + DF L+
Sbjct: 132 SPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA---DNNDITICDFNLAREDTADA 188
Query: 238 VFKDIVGSAYYIAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAI-- 293
V +Y APE++ + + D+WS G ++ + F + + N I
Sbjct: 189 NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVE 248
Query: 294 ---------------------LRGHI-DFTSDPW----PSISPQAKDLVKKMLNSDPKQR 327
LR + + + W P+ P A DL+ KML +P++R
Sbjct: 249 VVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRR 308
Query: 328 LTATEVLAHPWIK 340
++ + L HP+ +
Sbjct: 309 ISTEQALRHPYFE 321
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 118/281 (41%), Gaps = 35/281 (12%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTG 138
SFGK LG G FG T G + A T+A + L + + E + E++++ +L
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRT-------- 188
NIV L GA ++ E C G+L + + K + + +++
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 189 --------IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFK 240
+ + + S IHRDL N LL K DFGL+ K +
Sbjct: 162 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIKNDSNYV 218
Query: 241 DIVGSAY----YIAPE-VLKRKYGPEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAIL 294
+ G+A ++APE + Y E+D+WS G+ L+ L G P+ F ++
Sbjct: 219 -VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 277
Query: 295 RGHIDFTSDPWPSISP-QAKDLVKKMLNSDPKQRLTATEVL 334
+ S P +P + D++K ++DP +R T +++
Sbjct: 278 KEGFRMLS---PEHAPAEMYDIMKTCWDADPLKRPTFKQIV 315
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 45/253 (17%)
Query: 126 VRREVQIMHHLTGQPNIVELKGAYE--DKQSVHLVMELCAGGELFDRIIAKGHYTERAAA 183
V RE+++++H PNI+ L+ + ++ ++H +L EL +A+ + +R
Sbjct: 76 VLREIRLLNHF-HHPNILGLRDIFVHFEEPAMH---KLYLVTELMRTDLAQVIHDQRIVI 131
Query: 184 S------LLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGE 237
S + I+ +H H GV+HRDL P N LL +N+ + DF L+
Sbjct: 132 SPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA---DNNDITICDFNLAREDTADA 188
Query: 238 VFKDIVGSAYYIAPEVLK--RKYGPEADIWSIGVMLYILLCGVPPFWAESEHGIFNAI-- 293
V +Y APE++ + + D+WS G ++ + F + + N I
Sbjct: 189 NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVE 248
Query: 294 ---------------------LRGHI-DFTSDPW----PSISPQAKDLVKKMLNSDPKQR 327
LR + + + W P+ P A DL+ KML +P++R
Sbjct: 249 VVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRR 308
Query: 328 LTATEVLAHPWIK 340
++ + L HP+ +
Sbjct: 309 ISTEQALRHPYFE 321
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 118/281 (41%), Gaps = 35/281 (12%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTG 138
SFGK LG G FG T G + A T+A + L + + E + E++++ +L
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRT-------- 188
NIV L GA ++ E C G+L + + K + + +++
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 189 --------IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFK 240
+ + + S IHRDL N LL K DFGL+ K +
Sbjct: 146 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIKNDSNYV 202
Query: 241 DIVGSAY----YIAPE-VLKRKYGPEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAIL 294
+ G+A ++APE + Y E+D+WS G+ L+ L G P+ F ++
Sbjct: 203 -VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 261
Query: 295 RGHIDFTSDPWPSISP-QAKDLVKKMLNSDPKQRLTATEVL 334
+ S P +P + D++K ++DP +R T +++
Sbjct: 262 KEGFRMLS---PEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 118/281 (41%), Gaps = 35/281 (12%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTG 138
SFGK LG G FG T G + A T+A + L + + E + E++++ +L
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRT-------- 188
NIV L GA ++ E C G+L + + K + + +++
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 189 --------IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFK 240
+ + + S IHRDL N LL K DFGL+ K +
Sbjct: 169 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIKNDSNYV 225
Query: 241 DIVGSAY----YIAPE-VLKRKYGPEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAIL 294
+ G+A ++APE + Y E+D+WS G+ L+ L G P+ F ++
Sbjct: 226 -VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 284
Query: 295 RGHIDFTSDPWPSISP-QAKDLVKKMLNSDPKQRLTATEVL 334
+ S P +P + D++K ++DP +R T +++
Sbjct: 285 KEGFRMLS---PEHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 88/200 (44%), Gaps = 20/200 (10%)
Query: 85 KELGRGQFGITH---LCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
++LG G FG+ G A K + L E ++D REV MH L + N
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR-N 76
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIA-KGHYTERAAASLLRTIVQI---IHTCH 197
++ L G + +V EL G L DR+ +GH+ +L R VQ+ +
Sbjct: 77 LIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYLE 132
Query: 198 SMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGE---VFKDIVGSAY-YIAPEV 253
S IHRDL N LL +D +K DFGL Q + V ++ + + APE
Sbjct: 133 SKRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 254 LK-RKYGPEADIWSIGVMLY 272
LK R + +D W GV L+
Sbjct: 190 LKTRTFSHASDTWMFGVTLW 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 88/200 (44%), Gaps = 20/200 (10%)
Query: 85 KELGRGQFGITH---LCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
++LG G FG+ G A K + L E ++D REV MH L + N
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR-N 82
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIA-KGHYTERAAASLLRTIVQI---IHTCH 197
++ L G + +V EL G L DR+ +GH+ +L R VQ+ +
Sbjct: 83 LIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYLE 138
Query: 198 SMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGE---VFKDIVGSAY-YIAPEV 253
S IHRDL N LL +D +K DFGL Q + V ++ + + APE
Sbjct: 139 SKRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 195
Query: 254 LK-RKYGPEADIWSIGVMLY 272
LK R + +D W GV L+
Sbjct: 196 LKTRTFSHASDTWMFGVTLW 215
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 88/200 (44%), Gaps = 20/200 (10%)
Query: 85 KELGRGQFGITH---LCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
++LG G FG+ G A K + L E ++D REV MH L + N
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR-N 82
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIA-KGHYTERAAASLLRTIVQI---IHTCH 197
++ L G + +V EL G L DR+ +GH+ +L R VQ+ +
Sbjct: 83 LIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYLE 138
Query: 198 SMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGE---VFKDIVGSAY-YIAPEV 253
S IHRDL N LL +D +K DFGL Q + V ++ + + APE
Sbjct: 139 SKRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 195
Query: 254 LK-RKYGPEADIWSIGVMLY 272
LK R + +D W GV L+
Sbjct: 196 LKTRTFSHASDTWMFGVTLW 215
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 353 AVLSRLKQFKAMNKFKKVALRVIAGCLSE-EEIMGLKEMFKSIDTDNSGTITLEELKQGL 411
L +K+F++ K + A+ + L+ EE L ++F+ +D + G + +EL +G
Sbjct: 7 GALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGY 66
Query: 412 AK----QGTKLSEYEAKQL-------MEAADADGNGTIDYHEFITATMHLNRMDREEHLY 460
K +G +S+ ++ Q+ +++ D D NG I+Y EF+T M + E L
Sbjct: 67 RKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLL 126
Query: 461 TAFQHFDKDNS 471
AFQ FD D S
Sbjct: 127 AAFQQFDSDGS 137
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
LS E ++ F+ D+D SG IT EEL G T++ + Q+++ D + +G +
Sbjct: 120 LSRERLLA---AFQQFDSDGSGKITNEEL--GRLFGVTEVDDETWHQVLQECDKNNDGEV 174
Query: 439 DYHEFI 444
D+ EF+
Sbjct: 175 DFEEFV 180
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 118/281 (41%), Gaps = 35/281 (12%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTG 138
SFGK LG G FG T G + A T+A + L + + E + E++++ +L
Sbjct: 44 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 103
Query: 139 QPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAK--GHYTERAAASLLRT-------- 188
NIV L GA ++ E C G+L + + K + + +++
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 189 --------IVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFK 240
+ + + S IHRDL N LL K DFGL+ K +
Sbjct: 164 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIKNDSNYV 220
Query: 241 DIVGSAY----YIAPE-VLKRKYGPEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAIL 294
+ G+A ++APE + Y E+D+WS G+ L+ L G P+ F ++
Sbjct: 221 -VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 279
Query: 295 RGHIDFTSDPWPSISP-QAKDLVKKMLNSDPKQRLTATEVL 334
+ S P +P + D++K ++DP +R T +++
Sbjct: 280 KEGFRMLS---PEHAPAEMYDIMKTCWDADPLKRPTFKQIV 317
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 86/199 (43%), Gaps = 18/199 (9%)
Query: 85 KELGRGQFGITH---LCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
++LG G FG+ G A K + L E ++D REV MH L + N
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR-N 72
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHS 198
++ L G + +V EL G L DR+ + H +L R VQ+ + S
Sbjct: 73 LIRLYGVVL-TPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGE---VFKDIVGSAY-YIAPEVL 254
IHRDL N LL +D +K DFGL Q + V ++ + + APE L
Sbjct: 130 KRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 255 K-RKYGPEADIWSIGVMLY 272
K R + +D W GV L+
Sbjct: 187 KTRTFSHASDTWMFGVTLW 205
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+ ++E F DTD SGTI +ELK + G + + E K+++ D DG+GTI
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 439 DYHEFIT-ATMHLNRMDREEHLYTAFQHFDKDNS 471
D+ EF+ T + D E + AF+ FD D +
Sbjct: 62 DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDET 95
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 380 SEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTID 439
S EEIM + F+ D D +G I+ + LK+ + G +++ E +++++ AD DG+G ++
Sbjct: 79 SREEIM---KAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVN 135
Query: 440 YHEFI 444
EF
Sbjct: 136 EEEFF 140
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 86/199 (43%), Gaps = 18/199 (9%)
Query: 85 KELGRGQFGITH---LCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
++LG G FG+ G A K + L E ++D REV MH L + N
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR-N 72
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHS 198
++ L G + +V EL G L DR+ + H +L R VQ+ + S
Sbjct: 73 LIRLYGVVL-TPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGE---VFKDIVGSAY-YIAPEVL 254
IHRDL N LL +D +K DFGL Q + V ++ + + APE L
Sbjct: 130 KRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 186
Query: 255 K-RKYGPEADIWSIGVMLY 272
K R + +D W GV L+
Sbjct: 187 KTRTFSHASDTWMFGVTLW 205
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 86/199 (43%), Gaps = 18/199 (9%)
Query: 85 KELGRGQFGITH---LCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
++LG G FG+ G A K + L E ++D REV MH L + N
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR-N 76
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHS 198
++ L G + +V EL G L DR+ + H +L R VQ+ + S
Sbjct: 77 LIRLYGVVL-TPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQVAEGMGYLES 133
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGE---VFKDIVGSAY-YIAPEVL 254
IHRDL N LL +D +K DFGL Q + V ++ + + APE L
Sbjct: 134 KRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 255 K-RKYGPEADIWSIGVMLY 272
K R + +D W GV L+
Sbjct: 191 KTRTFSHASDTWMFGVTLW 209
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 115/252 (45%), Gaps = 23/252 (9%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG+G FG + T GT + A KT+ + E +E Q+M L + +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHE-KLVQL 78
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAA-ASLLRTIVQIIHTCHSMGVIH 203
A ++ +++VME + G L D + + G Y + I + M +H
Sbjct: 79 Y-AVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 204 RDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPE-VLKRKYG 259
RDL+ N L+ EN K DFGL+ + E + G+ + + APE L ++
Sbjct: 138 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 193
Query: 260 PEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQA-KDLVK 317
++D+WS G++L L G P+ + + + RG+ P P P++ DL+
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----RMPCPPECPESLHDLMC 249
Query: 318 KMLNSDPKQRLT 329
+ DP++R T
Sbjct: 250 QCWRKDPEERPT 261
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 86/199 (43%), Gaps = 18/199 (9%)
Query: 85 KELGRGQFGITH---LCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPN 141
++LG G FG+ G A K + L E ++D REV MH L + N
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR-N 72
Query: 142 IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI---IHTCHS 198
++ L G + +V EL G L DR+ + H +L R VQ+ + S
Sbjct: 73 LIRLYGVVL-TPPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 199 MGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGE---VFKDIVGSAY-YIAPEVL 254
IHRDL N LL +D +K DFGL Q + V ++ + + APE L
Sbjct: 130 KRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 255 K-RKYGPEADIWSIGVMLY 272
K R + +D W GV L+
Sbjct: 187 KTRTFSHASDTWMFGVTLW 205
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 94/228 (41%), Gaps = 34/228 (14%)
Query: 77 VKATYSFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHL 136
V Y +GRG +G +L K T + A K + R + D + + RE+ I++ L
Sbjct: 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKV-NRMFEDLIDCKRILREITILNRL 82
Query: 137 TGQPNIVELKGAYEDK----QSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQI 192
I D +++V+E+ A +L TE ++L ++
Sbjct: 83 KSDYIIRLYDLIIPDDLLKFDELYIVLEI-ADSDLKKLFKTPIFLTEEHIKTILYNLLLG 141
Query: 193 IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFY---KQGEVFKDI------- 242
+ H G+IHRDLKP N LL +++ +K DFGL+ K + D+
Sbjct: 142 ENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 243 -------------VGSAYYIAPE--VLKRKYGPEADIWSIGVMLYILL 275
V + +Y APE +L+ Y DIWS G + LL
Sbjct: 199 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 305 WPSISPQAKDLVKKMLNSDPKQRLTATEVLAHPWIKE 341
+PSIS +L++ ML +P +R+T + L HP++K+
Sbjct: 331 YPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 133/343 (38%), Gaps = 73/343 (21%)
Query: 77 VKATYSFGKELGRGQFGITHLCT-HKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHH 135
++ Y LG G FG C H+ G + A K I K V K E R E+ ++
Sbjct: 31 LQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKII---KNVEKYK-EAARLEINVLEK 86
Query: 136 LTGQ-PN----IVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGH--YTERAAASLLRT 188
+ + P+ V++ ++ + + EL G FD + + Y +
Sbjct: 87 INEKDPDNKNLCVQMFDWFDYHGHMCISFELL-GLSTFDFLKDNNYLPYPIHQVRHMAFQ 145
Query: 189 IVQIIHTCHSMGVIHRDLKPENFLLLNKD----------------ENSPLKATDFGLSVF 232
+ Q + H + H DLKPEN L +N D +++ ++ DFG + F
Sbjct: 146 LCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATF 205
Query: 233 YKQGEVFKDIVGSAYYIAPEV-LKRKYGPEADIWSIGVMLYILLCGVPPFWAES--EH-G 288
E IV + +Y APEV L+ + D+WSIG +++ G F EH
Sbjct: 206 --DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLA 263
Query: 289 IFNAIL------------------RGHIDFTSDPWP------SISP-------------Q 311
+ IL RG +D+ + + P Q
Sbjct: 264 MMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQ 323
Query: 312 AKDLVKKMLNSDPKQRLTATEVLAHPWI-KEDGEAPDVPLDNA 353
DL++ ML +P +RLT E L HP+ + E P+ D++
Sbjct: 324 LFDLIESMLEYEPAKRLTLGEALQHPFFARLRAEPPNKLWDSS 366
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 23/252 (9%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG+G FG + T GT + A KT+ + E +E Q+M L + +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHE-KLVQL 78
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAA-ASLLRTIVQIIHTCHSMGVIH 203
A ++ +++V+E + G L D + + G Y + I + M +H
Sbjct: 79 Y-AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 204 RDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPE-VLKRKYG 259
RDL+ N L+ EN K DFGL+ + E + G+ + + APE L ++
Sbjct: 138 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 193
Query: 260 PEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQA-KDLVK 317
++D+WS G++L L G P+ + + + RG+ P P P++ DL+
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----RMPCPPECPESLHDLMC 249
Query: 318 KMLNSDPKQRLT 329
+ DP++R T
Sbjct: 250 QCWRKDPEERPT 261
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 114/276 (41%), Gaps = 26/276 (9%)
Query: 82 SFGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTG 138
+ GK LGRG FG G + +T+A + L + + E++I+ H+
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 139 QPNIVELKGA-YEDKQSVHLVMELCAGGELFDRI------------IAKGHYTERAAASL 185
N+V L GA + + +++E C G L + + K T
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 186 LRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYKQGEVFK--DI 242
+ + + S IHRDL N LL E + +K DFGL+ YK + + D
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILL---SEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 243 VGSAYYIAPE-VLKRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGHIDF 300
++APE + R Y ++D+WS GV+L+ I G P+ F L+
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRM 266
Query: 301 TSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAH 336
+ + +P+ + + +P QR T +E++ H
Sbjct: 267 RAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 364 MNKFKKVALRVIAGCLSE--EEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEY 421
M+ ++ A CLS I GL F+ +D D S ++ +E +QGLAK G L +
Sbjct: 14 MDAVDATMEKLRAQCLSRGASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQA 73
Query: 422 EAKQLMEAADADGNGTIDYHEFITATMHLNRMDREEHLYTAFQHFDK 468
EA+ + D +G+GT+D EF+ A RE + AF D+
Sbjct: 74 EAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDR 120
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D D G IT ++L + G +E E + ++ ADGNGTI
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTI 364
Query: 439 DYHEFITATMH-LNRMDREEHLYTAFQHFDKDNS 471
D+ +F+T + D EE + AF+ F KD +
Sbjct: 365 DFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGN 398
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 366 KFKKVALRVIAGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQ 425
+F + R + SEEEI +E F+ D +G I+ +L+ + G KL++ E +
Sbjct: 368 QFLTMMARKMKDTDSEEEI---REAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDE 424
Query: 426 LMEAADADGNGTIDYHEFI 444
++ A DG+G ++Y +F+
Sbjct: 425 MIREAGIDGDGQVNYEQFV 443
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG+G FG + T GT + A KT+ + E +E Q+M L + +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHE-KLVQL 78
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAA-ASLLRTIVQIIHTCHSMGVIH 203
A ++ +++V E + G L D + + G Y + I + M +H
Sbjct: 79 Y-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 204 RDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPE-VLKRKYG 259
RDL+ N L+ EN K DFGL+ + E + G+ + + APE L ++
Sbjct: 138 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 193
Query: 260 PEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQA-KDLVK 317
++D+WS G++L L G P+ + + + RG+ P P P++ DL+
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----RMPCPPECPESLHDLMC 249
Query: 318 KMLNSDPKQRLT 329
+ DP++R T
Sbjct: 250 QCWRKDPEERPT 261
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG+G FG + T GT + A KT+ + E +E Q+M L + +V+L
Sbjct: 16 KLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHE-KLVQL 69
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAA-ASLLRTIVQIIHTCHSMGVIH 203
A ++ +++V E + G L D + + G Y + I + M +H
Sbjct: 70 Y-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 128
Query: 204 RDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPE-VLKRKYG 259
RDL+ N L+ EN K DFGL+ + E + G+ + + APE L ++
Sbjct: 129 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 184
Query: 260 PEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQA-KDLVK 317
++D+WS G++L L G P+ + + + RG+ P P P++ DL+
Sbjct: 185 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----RMPCPPECPESLHDLMC 240
Query: 318 KMLNSDPKQRLT 329
+ DP++R T
Sbjct: 241 QCWRKDPEERPT 252
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 23/252 (9%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG+G FG + T GT + A KT+ + E +E Q+M L + +V+L
Sbjct: 192 KLGQGCFGEVWMGTWNGT-TRVAIKTLKPGNM----SPEAFLQEAQVMKKLRHE-KLVQL 245
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAA-ASLLRTIVQIIHTCHSMGVIH 203
A ++ +++V E + G L D + + G Y + I + M +H
Sbjct: 246 Y-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 304
Query: 204 RDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPE-VLKRKYG 259
RDL+ N L+ EN K DFGL + E + G+ + + APE L ++
Sbjct: 305 RDLRAANILV---GENLVCKVADFGLGRLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 360
Query: 260 PEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQA-KDLVK 317
++D+WS G++L L G P+ + + + RG+ P P P++ DL+
Sbjct: 361 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----RMPCPPECPESLHDLMC 416
Query: 318 KMLNSDPKQRLT 329
+ DP++R T
Sbjct: 417 QCWRKDPEERPT 428
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG+G FG + T GT + A KT+ + E +E Q+M L + +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHE-KLVQL 78
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAA-ASLLRTIVQIIHTCHSMGVIH 203
A ++ +++V E + G L D + + G Y + I + M +H
Sbjct: 79 Y-AVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 204 RDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPE-VLKRKYG 259
RDL+ N L+ EN K DFGL+ + E + G+ + + APE L ++
Sbjct: 138 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 193
Query: 260 PEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQA-KDLVK 317
++D+WS G++L L G P+ + + + RG+ P P P++ DL+
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----RMPCPPECPESLHDLMC 249
Query: 318 KMLNSDPKQRLT 329
+ DP++R T
Sbjct: 250 QCWRKDPEERPT 261
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG+G FG + T GT + A KT+ + E +E Q+M L + +V+L
Sbjct: 14 KLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHE-KLVQL 67
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAA-ASLLRTIVQIIHTCHSMGVIH 203
A ++ +++V E + G L D + + G Y + I + M +H
Sbjct: 68 Y-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 126
Query: 204 RDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPE-VLKRKYG 259
RDL+ N L+ EN K DFGL+ + E + G+ + + APE L ++
Sbjct: 127 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 182
Query: 260 PEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQA-KDLVK 317
++D+WS G++L L G P+ + + + RG+ P P P++ DL+
Sbjct: 183 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----RMPCPPECPESLHDLMC 238
Query: 318 KMLNSDPKQRLT 329
+ DP++R T
Sbjct: 239 QCWRKDPEERPT 250
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 97/239 (40%), Gaps = 52/239 (21%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDI---EDVRREVQIMHHLTGQ 139
FGK LG G FG T G + +A + L K D E + E+++M L
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 108
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGH-YTE------------------- 179
NIV L GA ++L+ E C G+L + + +K ++E
Sbjct: 109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 180 RAAASLLRTIVQIIHTCHSM---GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQG 236
LL Q+ + +HRDL N L+ + +K DFGL+
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH---GKVVKICDFGLA------ 219
Query: 237 EVFKDIVGSAYYI------------APEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPF 281
+DI+ + Y+ APE L + Y ++D+WS G++L+ I GV P+
Sbjct: 220 ---RDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG+G FG + T GT + A KT+ + E +E Q+M L + +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHE-KLVQL 78
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAA-ASLLRTIVQIIHTCHSMGVIH 203
A ++ +++V+E + G L D + + G Y + I + M +H
Sbjct: 79 Y-AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 204 RDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPE-VLKRKYG 259
RDL+ N L+ EN K DFGL+ + E G+ + + APE L ++
Sbjct: 138 RDLRAANILV---GENLVCKVADFGLARLIEDNEXTAR-QGAKFPIKWTAPEAALYGRFT 193
Query: 260 PEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQA-KDLVK 317
++D+WS G++L L G P+ + + + RG+ P P P++ DL+
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----RMPCPPECPESLHDLMC 249
Query: 318 KMLNSDPKQRLT 329
+ DP++R T
Sbjct: 250 QCWRKDPEERPT 261
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 102/247 (41%), Gaps = 36/247 (14%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTGQ 139
GK LG G+FG T + T+A + L + ++ D+ E ++ +
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN-H 85
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELF-----DRIIAKG--------------HYTER 180
P++++L GA + L++E G L R + G H ER
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 181 AAA-----SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYK 234
A S I Q + M ++HRDL N L+ E +K +DFGLS Y+
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILV---AEGRKMKISDFGLSRDVYE 202
Query: 235 QGEVFKDIVGS--AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIF 290
+ K G ++A E L Y ++D+WS GV+L+ I+ G P+ +F
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF 262
Query: 291 NAILRGH 297
N + GH
Sbjct: 263 NLLKTGH 269
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 27/197 (13%)
Query: 85 KELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVE 144
+ +G+G+FG L ++G C + N + E +M L N+V+
Sbjct: 18 QTIGKGEFGDVMLGDYRGNKVAVKC-------IKNDATAQAFLAEASVMTQLR-HSNLVQ 69
Query: 145 LKGA-YEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIIHTCHSM---- 199
L G E+K +++V E A G L D + ++G + LL+ + + C +M
Sbjct: 70 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDV---CEAMEYLE 125
Query: 200 --GVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVG-SAYYIAPEVLKR 256
+HRDL N L+ E++ K +DFGL+ K+ +D + APE L+
Sbjct: 126 GNNFVHRDLAARNVLV---SEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALRE 179
Query: 257 K-YGPEADIWSIGVMLY 272
+ ++D+WS G++L+
Sbjct: 180 AAFSTKSDVWSFGILLW 196
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 114/277 (41%), Gaps = 28/277 (10%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTGQ 139
GK LGRG FG G + +T+A + L + + E++I+ H+
Sbjct: 33 LGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 140 PNIVELKGA-YEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAAASLLRTIVQIIHTCH 197
N+V L GA + + +++E C G L + +K + L + + + H
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIX 152
Query: 198 -------------SMGVIHRDLKPENFLLLNKDENSPLKATDFGLS--VFYKQGEVFK-D 241
S IHRDL N LL E + +K DFGL+ + V K D
Sbjct: 153 YSFQVAKGMEFLASRKXIHRDLAARNILL---SEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 242 IVGSAYYIAPE-VLKRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILRGHID 299
++APE + R Y ++D+WS GV+L+ I G P+ F L+
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 269
Query: 300 FTSDPWPSISPQAKDLVKKMLNSDPKQRLTATEVLAH 336
+ + +P+ + + +P QR T +E++ H
Sbjct: 270 MRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG+G FG + T GT + A KT+ + E +E Q+M L + +V+L
Sbjct: 274 KLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHE-KLVQL 327
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAA-ASLLRTIVQIIHTCHSMGVIH 203
A ++ +++V E + G L D + + G Y + I + M +H
Sbjct: 328 Y-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 386
Query: 204 RDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPE-VLKRKYG 259
RDL+ N L+ EN K DFGL+ + E + G+ + + APE L ++
Sbjct: 387 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 442
Query: 260 PEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQA-KDLVK 317
++D+WS G++L L G P+ + + + RG+ P P P++ DL+
Sbjct: 443 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----RMPCPPECPESLHDLMC 498
Query: 318 KMLNSDPKQRLT 329
+ +P++R T
Sbjct: 499 QCWRKEPEERPT 510
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 436 GTIDYHEFIT 445
GTID+ EF+T
Sbjct: 61 GTIDFPEFLT 70
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 436 GTIDYHEFIT 445
GTID+ EF+T
Sbjct: 62 GTIDFPEFLT 71
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG+G FG + T GT + A KT+ + E +E Q+M + + +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKIRHE-KLVQL 78
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAA-ASLLRTIVQIIHTCHSMGVIH 203
A ++ +++V E + G L D + + G Y + I + M +H
Sbjct: 79 Y-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 204 RDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPE-VLKRKYG 259
RDL+ N L+ EN K DFGL+ + E + G+ + + APE L ++
Sbjct: 138 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 193
Query: 260 PEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQA-KDLVK 317
++D+WS G++L L G P+ + + + RG+ P P P++ DL+
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----RMPCPPECPESLHDLMC 249
Query: 318 KMLNSDPKQRLT 329
+ DP++R T
Sbjct: 250 QCWRKDPEERPT 261
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 436 GTIDYHEFIT 445
GTID+ EF+T
Sbjct: 61 GTIDFPEFLT 70
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 436 GTIDYHEFIT 445
GTID+ EF+T
Sbjct: 61 GTIDFPEFLT 70
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 23/252 (9%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG+G FG + T GT + A KT+ + E +E Q+M L + +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHE-KLVQL 78
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAA-ASLLRTIVQIIHTCHSMGVIH 203
A ++ +++V E + G L D + + G Y + I + M +H
Sbjct: 79 Y-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 204 RDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPEV-LKRKYG 259
RDL N L+ EN K DFGL+ + E + G+ + + APE L ++
Sbjct: 138 RDLAAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 193
Query: 260 PEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQA-KDLVK 317
++D+WS G++L L G P+ + + + RG+ P P P++ DL+
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----RMPCPPECPESLHDLMC 249
Query: 318 KMLNSDPKQRLT 329
+ DP++R T
Sbjct: 250 QCWRKDPEERPT 261
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 436 GTIDYHEFIT 445
GTID+ EF+T
Sbjct: 61 GTIDFPEFLT 70
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 105/244 (43%), Gaps = 46/244 (18%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKED---IEDVRREVQIMHHLTGQ 139
F +ELG +FG + G + +A + L +K + E+ R E + L
Sbjct: 30 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQ-H 88
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRT----------- 188
PN+V L G Q + ++ C+ G+L + ++ + +++ + RT
Sbjct: 89 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 189 --IVQI---IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
+ QI + S V+H+DL N L+ +K +K +D GL F+++
Sbjct: 149 HLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN---VKISDLGL---------FREVY 196
Query: 244 GSAYY------------IAPE-VLKRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGI 289
+ YY +APE ++ K+ ++DIWS GV+L+ + G+ P+ S +
Sbjct: 197 AADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 256
Query: 290 FNAI 293
I
Sbjct: 257 VEMI 260
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 22/228 (9%)
Query: 83 FGKELGRGQFGITHLCTHKGT-----GQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLT 137
F + +GRG FG C + GT G++ C + ++ + ++ E IM +
Sbjct: 93 FNEVIGRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 148
Query: 138 GQPNIVELKG-AYEDKQSVHLVMELCAGGELFDRIIAKGHY-TERAAASLLRTIVQIIHT 195
PN++ L G + S +V+ G+L + I + H T + + + +
Sbjct: 149 -HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 207
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS--VFYKQGEVFKDIVGSAY---YIA 250
S +HRDL N +L DE +K DFGL+ ++ K+ + + G+ ++A
Sbjct: 208 LASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 251 PEVLK-RKYGPEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRG 296
E L+ +K+ ++D+WS GV+L+ L+ G PP+ + I +L+G
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 312
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 102/247 (41%), Gaps = 36/247 (14%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTGQ 139
GK LG G+FG T + T+A + L + ++ D+ E ++ +
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN-H 85
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELF-----DRIIAKG--------------HYTER 180
P++++L GA + L++E G L R + G H ER
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 181 AAA-----SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYK 234
A S I Q + M ++HRDL N L+ E +K +DFGLS Y+
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV---AEGRKMKISDFGLSRDVYE 202
Query: 235 QGEVFKDIVGS--AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIF 290
+ K G ++A E L Y ++D+WS GV+L+ I+ G P+ +F
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF 262
Query: 291 NAILRGH 297
N + GH
Sbjct: 263 NLLKTGH 269
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%)
Query: 376 AGCLSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGN 435
A L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 436 GTIDYHEFIT 445
GTID+ EF+T
Sbjct: 61 GTIDFPEFLT 70
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG+G FG + T GT + A KT+ + E +E Q+M L + +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHE-KLVQL 78
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAA-ASLLRTIVQIIHTCHSMGVIH 203
A ++ +++V E + G L D + + G Y + I + M +H
Sbjct: 79 Y-AVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 204 RDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPE-VLKRKYG 259
RDL+ N L+ EN K DFGL+ + E + G+ + + APE L ++
Sbjct: 138 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 193
Query: 260 PEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQA-KDLVK 317
++D+WS G++L L G P+ + + + RG+ P P P++ DL+
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----RMPCPPECPESLHDLMC 249
Query: 318 KMLNSDPKQRLT 329
+ DP++R T
Sbjct: 250 QCWRKDPEERPT 261
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 105/244 (43%), Gaps = 46/244 (18%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKED---IEDVRREVQIMHHLTGQ 139
F +ELG +FG + G + +A + L +K + E+ R E + L
Sbjct: 13 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQ-H 71
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRT----------- 188
PN+V L G Q + ++ C+ G+L + ++ + +++ + RT
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 189 --IVQI---IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIV 243
+ QI + S V+H+DL N L+ +K +K +D GL F+++
Sbjct: 132 HLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN---VKISDLGL---------FREVY 179
Query: 244 GSAYY------------IAPE-VLKRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGI 289
+ YY +APE ++ K+ ++DIWS GV+L+ + G+ P+ S +
Sbjct: 180 AADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 239
Query: 290 FNAI 293
I
Sbjct: 240 VEMI 243
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 102/247 (41%), Gaps = 36/247 (14%)
Query: 83 FGKELGRGQFGITHLCTHKGTGQQFACKTIAKRKL---VNKEDIEDVRREVQIMHHLTGQ 139
GK LG G+FG T + T+A + L + ++ D+ E ++ +
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN-H 85
Query: 140 PNIVELKGAYEDKQSVHLVMELCAGGELF-----DRIIAKG--------------HYTER 180
P++++L GA + L++E G L R + G H ER
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 181 AAA-----SLLRTIVQIIHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSV-FYK 234
A S I Q + M ++HRDL N L+ E +K +DFGLS Y+
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV---AEGRKMKISDFGLSRDVYE 202
Query: 235 QGEVFKDIVGS--AYYIAPEVL-KRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIF 290
+ K G ++A E L Y ++D+WS GV+L+ I+ G P+ +F
Sbjct: 203 EDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF 262
Query: 291 NAILRGH 297
N + GH
Sbjct: 263 NLLKTGH 269
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 22/228 (9%)
Query: 83 FGKELGRGQFGITHLCTHKGT-----GQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLT 137
F + +GRG FG C + GT G++ C + ++ + ++ E IM +
Sbjct: 35 FNEVIGRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 90
Query: 138 GQPNIVELKG-AYEDKQSVHLVMELCAGGELFDRIIAKGHY-TERAAASLLRTIVQIIHT 195
PN++ L G + S +V+ G+L + I + H T + + + +
Sbjct: 91 -HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 149
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS--VFYKQGEVFKDIVGSAY---YIA 250
S +HRDL N +L DE +K DFGL+ ++ K+ + + G+ ++A
Sbjct: 150 LASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 251 PEVLK-RKYGPEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRG 296
E L+ +K+ ++D+WS GV+L+ L+ G PP+ + I +L+G
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 254
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 22/228 (9%)
Query: 83 FGKELGRGQFGITHLCTHKGT-----GQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLT 137
F + +GRG FG C + GT G++ C + ++ + ++ E IM +
Sbjct: 32 FNEVIGRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 87
Query: 138 GQPNIVELKG-AYEDKQSVHLVMELCAGGELFDRIIAKGHY-TERAAASLLRTIVQIIHT 195
PN++ L G + S +V+ G+L + I + H T + + + +
Sbjct: 88 -HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 146
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS--VFYKQGEVFKDIVGSAY---YIA 250
S +HRDL N +L DE +K DFGL+ ++ K+ + + G+ ++A
Sbjct: 147 LASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 251 PEVLK-RKYGPEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRG 296
E L+ +K+ ++D+WS GV+L+ L+ G PP+ + I +L+G
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 251
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 22/228 (9%)
Query: 83 FGKELGRGQFGITHLCTHKGT-----GQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLT 137
F + +GRG FG C + GT G++ C + ++ + ++ E IM +
Sbjct: 33 FNEVIGRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 88
Query: 138 GQPNIVELKG-AYEDKQSVHLVMELCAGGELFDRIIAKGHY-TERAAASLLRTIVQIIHT 195
PN++ L G + S +V+ G+L + I + H T + + + +
Sbjct: 89 -HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 147
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS--VFYKQGEVFKDIVGSAY---YIA 250
S +HRDL N +L DE +K DFGL+ ++ K+ + G+ ++A
Sbjct: 148 LASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 251 PEVLK-RKYGPEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRG 296
E L+ +K+ ++D+WS GV+L+ L+ G PP+ + I +L+G
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 252
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 22/228 (9%)
Query: 83 FGKELGRGQFGITHLCTHKGT-----GQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLT 137
F + +GRG FG C + GT G++ C + ++ + ++ E IM +
Sbjct: 34 FNEVIGRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 138 GQPNIVELKG-AYEDKQSVHLVMELCAGGELFDRIIAKGHY-TERAAASLLRTIVQIIHT 195
PN++ L G + S +V+ G+L + I + H T + + + +
Sbjct: 90 -HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 148
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS--VFYKQGEVFKDIVGSAY---YIA 250
S +HRDL N +L DE +K DFGL+ ++ K+ + + G+ ++A
Sbjct: 149 LASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 251 PEVLK-RKYGPEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRG 296
E L+ +K+ ++D+WS GV+L+ L+ G PP+ + I +L+G
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 253
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 109/243 (44%), Gaps = 42/243 (17%)
Query: 85 KELGRGQFGITHL--CTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNI 142
+ELG G FG L C + Q + K + +D RE +++ +L + +I
Sbjct: 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHE-HI 77
Query: 143 VELKGAYEDKQSVHLVMELCAGGEL--FDR-------IIAKGHY-TERAAASLLRTIVQI 192
V+ G + + +V E G+L F R ++A+G+ TE + +L QI
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 193 ---IHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAYY- 248
+ S +HRDL N L+ EN +K DFG+S +D+ + YY
Sbjct: 138 AAGMVYLASQHFVHRDLATRNCLV---GENLLVKIGDFGMS---------RDVYSTDYYR 185
Query: 249 -----------IAPE-VLKRKYGPEADIWSIGVMLY-ILLCGVPPFWAESEHGIFNAILR 295
+ PE ++ RK+ E+D+WS+GV+L+ I G P++ S + + I +
Sbjct: 186 VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ 245
Query: 296 GHI 298
G +
Sbjct: 246 GRV 248
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 22/228 (9%)
Query: 83 FGKELGRGQFGITHLCTHKGT-----GQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLT 137
F + +GRG FG C + GT G++ C + ++ + ++ E IM +
Sbjct: 34 FNEVIGRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 138 GQPNIVELKG-AYEDKQSVHLVMELCAGGELFDRIIAKGHY-TERAAASLLRTIVQIIHT 195
PN++ L G + S +V+ G+L + I + H T + + + +
Sbjct: 90 -HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 148
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS--VFYKQGEVFKDIVGSAY---YIA 250
S +HRDL N +L DE +K DFGL+ ++ K+ + + G+ ++A
Sbjct: 149 LASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 251 PEVLK-RKYGPEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRG 296
E L+ +K+ ++D+WS GV+L+ L+ G PP+ + I +L+G
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 253
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG+G FG + T GT + A KT+ + E +E Q+M L + +V+L
Sbjct: 191 KLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHE-KLVQL 244
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAA-ASLLRTIVQIIHTCHSMGVIH 203
A ++ +++V E + G L D + + G Y + I + M +H
Sbjct: 245 Y-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 204 RDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPE-VLKRKYG 259
RDL+ N L+ EN K DFGL+ + E + G+ + + APE L ++
Sbjct: 304 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 359
Query: 260 PEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQA-KDLVK 317
++D+WS G++L L G P+ + + + RG+ P P P++ DL+
Sbjct: 360 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----RMPCPPECPESLHDLMC 415
Query: 318 KMLNSDPKQRLT 329
+ +P++R T
Sbjct: 416 QCWRKEPEERPT 427
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 22/228 (9%)
Query: 83 FGKELGRGQFGITHLCTHKGT-----GQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLT 137
F + +GRG FG C + GT G++ C + ++ + ++ E IM +
Sbjct: 39 FNEVIGRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 94
Query: 138 GQPNIVELKG-AYEDKQSVHLVMELCAGGELFDRIIAKGHY-TERAAASLLRTIVQIIHT 195
PN++ L G + S +V+ G+L + I + H T + + + +
Sbjct: 95 -HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 153
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS--VFYKQGEVFKDIVGSAY---YIA 250
S +HRDL N +L DE +K DFGL+ ++ K+ + + G+ ++A
Sbjct: 154 LASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 251 PEVLK-RKYGPEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRG 296
E L+ +K+ ++D+WS GV+L+ L+ G PP+ + I +L+G
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 258
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGNGTI
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 439 DYHEFIT 445
D+ EF+T
Sbjct: 64 DFPEFLT 70
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG+G FG + T GT + A KT+ + E +E Q+M L + +V+L
Sbjct: 191 KLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHE-KLVQL 244
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAA-ASLLRTIVQIIHTCHSMGVIH 203
A ++ +++V E + G L D + + G Y + I + M +H
Sbjct: 245 Y-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 204 RDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPE-VLKRKYG 259
RDL+ N L+ EN K DFGL+ + E + G+ + + APE L ++
Sbjct: 304 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 359
Query: 260 PEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQA-KDLVK 317
++D+WS G++L L G P+ + + + RG+ P P P++ DL+
Sbjct: 360 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----RMPCPPECPESLHDLMC 415
Query: 318 KMLNSDPKQRLT 329
+ +P++R T
Sbjct: 416 QCWRKEPEERPT 427
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG+G FG + T GT + A KT+ + E +E Q+M L + +V+L
Sbjct: 18 KLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHE-KLVQL 71
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAA-ASLLRTIVQIIHTCHSMGVIH 203
A ++ +++V E + G L D + + G Y + I + M +H
Sbjct: 72 Y-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 130
Query: 204 RDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPE-VLKRKYG 259
RDL+ N L+ EN K DFGL+ + E + G+ + + APE L ++
Sbjct: 131 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 186
Query: 260 PEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQA-KDLVK 317
++D+WS G++L L G P+ + + + RG+ P P P++ DL+
Sbjct: 187 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----RMPCPPECPESLHDLMC 242
Query: 318 KMLNSDPKQRLT 329
+ +P++R T
Sbjct: 243 QCWRKEPEERPT 254
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 22/228 (9%)
Query: 83 FGKELGRGQFGITHLCTHKGT-----GQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLT 137
F + +GRG FG C + GT G++ C + ++ + ++ E IM +
Sbjct: 52 FNEVIGRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 107
Query: 138 GQPNIVELKG-AYEDKQSVHLVMELCAGGELFDRIIAKGHY-TERAAASLLRTIVQIIHT 195
PN++ L G + S +V+ G+L + I + H T + + + +
Sbjct: 108 -HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 166
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS--VFYKQGEVFKDIVGSAY---YIA 250
S +HRDL N +L DE +K DFGL+ ++ K+ + G+ ++A
Sbjct: 167 LASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 251 PEVLK-RKYGPEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRG 296
E L+ +K+ ++D+WS GV+L+ L+ G PP+ + I +L+G
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 271
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 22/228 (9%)
Query: 83 FGKELGRGQFGITHLCTHKGT-----GQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLT 137
F + +GRG FG C + GT G++ C + ++ + ++ E IM +
Sbjct: 34 FNEVIGRGHFG----CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 138 GQPNIVELKG-AYEDKQSVHLVMELCAGGELFDRIIAKGHY-TERAAASLLRTIVQIIHT 195
PN++ L G + S +V+ G+L + I + H T + + + +
Sbjct: 90 -HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 148
Query: 196 CHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLS--VFYKQGEVFKDIVGSAY---YIA 250
S +HRDL N +L DE +K DFGL+ ++ K+ + G+ ++A
Sbjct: 149 LASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 251 PEVLK-RKYGPEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRG 296
E L+ +K+ ++D+WS GV+L+ L+ G PP+ + I +L+G
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 253
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%)
Query: 379 LSEEEIMGLKEMFKSIDTDNSGTITLEELKQGLAKQGTKLSEYEAKQLMEAADADGNGTI 438
L+EE+I KE F D D GTIT +EL + G +E E + ++ DADGNGTI
Sbjct: 4 LTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTI 63
Query: 439 DYHEFIT 445
D+ EF+T
Sbjct: 64 DFPEFLT 70
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 86 ELGRGQFGITHLCTHKGTGQQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVEL 145
+LG+G FG + T GT + A KT+ + E +E Q+M L + +V+L
Sbjct: 191 KLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHE-KLVQL 244
Query: 146 KGAYEDKQSVHLVMELCAGGELFDRIIAK-GHYTERAA-ASLLRTIVQIIHTCHSMGVIH 203
A ++ +++V E + G L D + + G Y + I + M +H
Sbjct: 245 Y-AVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 204 RDLKPENFLLLNKDENSPLKATDFGLSVFYKQGEVFKDIVGSAY---YIAPE-VLKRKYG 259
RDL+ N L+ EN K DFGL+ + E + G+ + + APE L ++
Sbjct: 304 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 359
Query: 260 PEADIWSIGVMLYILLC-GVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPQA-KDLVK 317
++D+WS G++L L G P+ + + + RG+ P P P++ DL+
Sbjct: 360 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----RMPCPPECPESLHDLMC 415
Query: 318 KMLNSDPKQRLT 329
+ +P++R T
Sbjct: 416 QCWRKEPEERPT 427
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,633,288
Number of Sequences: 62578
Number of extensions: 559396
Number of successful extensions: 5627
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 392
Number of HSP's that attempted gapping in prelim test: 1725
Number of HSP's gapped (non-prelim): 1982
length of query: 471
length of database: 14,973,337
effective HSP length: 102
effective length of query: 369
effective length of database: 8,590,381
effective search space: 3169850589
effective search space used: 3169850589
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)