BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042984
(132 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 83/142 (58%), Gaps = 32/142 (22%)
Query: 16 YDVFLSFREDE--------------------------------ISPSLSSAIEGSKISIV 43
YDVFLSFR ++ I L AIE S+ +IV
Sbjct: 12 YDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIV 71
Query: 44 IFSEGYASSRWCLNELVKILEIKNKYGQIVVPVFYRVDPSDVRNQTGTFGDSFSELEERF 103
+FSE YA+SRWCLNELVKI+E K ++ Q V+P+FY VDPS VRNQ +F +F E E ++
Sbjct: 72 VFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKY 131
Query: 104 KEKIDMLQTWRIAMREAANLSG 125
K+ ++ +Q WRIA+ EAANL G
Sbjct: 132 KDDVEGIQRWRIALNEAANLKG 153
>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170 OS=Arabidopsis
thaliana GN=At4g11170 PE=2 SV=1
Length = 1095
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 75/112 (66%), Gaps = 8/112 (7%)
Query: 20 LSFREDEISPS------LSSAIEGSKISIVIFSEGYASSRWCLNELVKILEIKNKYGQIV 73
++FR+D I S L +AI SKIS+V+FSE YASS WCL+EL++I++ K + G V
Sbjct: 40 VTFRDDHIKRSHTIGHELRAAIRESKISVVLFSENYASSSWCLDELIEIMKCKEEQGLKV 99
Query: 74 VPVFYRVDPSDVRNQTGTFGDSFSELEERFKEKIDMLQTWRIAMREAANLSG 125
+PVFY+VDPSD+R QTG FG SF LE + + WR A+ +AAN+ G
Sbjct: 100 MPVFYKVDPSDIRKQTGKFGMSF--LETCCGKTEERQHNWRRALTDAANILG 149
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis
thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 69/106 (65%), Gaps = 4/106 (3%)
Query: 23 REDEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILEIKNKYGQIVVPVFYRVDP 82
R I P L SAI+ S+I+IVIFS+ YASS WCLNELV+I + Q+V+P+F+ VD
Sbjct: 49 RSRSIGPELLSAIKESRIAIVIFSKNYASSTWCLNELVEIHKCYTNLNQMVIPIFFHVDA 108
Query: 83 SDVRNQTGTFGDSFSELEERFKEKI-DMLQTWRIAMREAANLSGFD 127
S+V+ QTG FG F EE K K D Q+W+ A+ A ++G+D
Sbjct: 109 SEVKKQTGEFGKVF---EETCKAKSEDEKQSWKQALAAVAVMAGYD 151
>sp|Q9C5Q9|P2A05_ARATH Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5
PE=2 SV=1
Length = 411
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 60/94 (63%)
Query: 30 SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILEIKNKYGQIVVPVFYRVDPSDVRNQT 89
SL I SKI++VIFSEGY S WC++ELVKI E ++ I++P+FYR+D V++ T
Sbjct: 66 SLFDTIGESKIALVIFSEGYCESHWCMDELVKIKEYMDQNRLIIIPIFYRLDLDVVKDLT 125
Query: 90 GTFGDSFSELEERFKEKIDMLQTWRIAMREAANL 123
G FGD+F +L ++++ + L W A+ L
Sbjct: 126 GKFGDNFWDLVDKYQPEPKKLHKWTEALFSVCEL 159
>sp|Q9FHE9|P2A08_ARATH Protein PHLOEM PROTEIN 2-LIKE A8 OS=Arabidopsis thaliana GN=PP2A8
PE=2 SV=1
Length = 354
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 57/92 (61%)
Query: 35 IEGSKISIVIFSEGYASSRWCLNELVKILEIKNKYGQIVVPVFYRVDPSDVRNQTGTFGD 94
I+ S++++VIFS+ Y SS WCL+EL +I + N+ G +P+FY++ PS V G FGD
Sbjct: 63 IQESRVAVVIFSKDYTSSEWCLDELAEIKDCINQGGLNAIPIFYKLAPSSVLELKGGFGD 122
Query: 95 SFSELEERFKEKIDMLQTWRIAMREAANLSGF 126
+F L+E++K + Q W+ A+ L G
Sbjct: 123 TFRVLKEKYKNDPERTQKWQEALESIPKLKGL 154
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 30/146 (20%)
Query: 2 ASSSSSINMIPHTKYDVFLSFREDEISPS------------------------------L 31
A+SS+ + I +Y VF++FR DE+ S L
Sbjct: 344 AASSTDDHGITLPQYQVFINFRGDELRNSFVGFLVKAMRLEKINVFTDEVELRGTNLNYL 403
Query: 32 SSAIEGSKISIVIFSEGYASSRWCLNELVKILEIKNKYGQIVVPVFYRVDPSDVRNQTGT 91
IE S++++ IFSE Y S WCL+ELVK+ E + +VVPVFYR++ + + G
Sbjct: 404 FRRIEESRVAVAIFSERYTESCWCLDELVKMKEQMEQGKLVVVPVFYRLNATACKRFMGA 463
Query: 92 FGDSFSELEERFKEKIDMLQTWRIAM 117
FGD+ LE ++ + + +Q W+ A+
Sbjct: 464 FGDNLRNLEWEYRSEPERIQKWKEAL 489
>sp|Q9FHE8|P2A06_ARATH Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6
PE=2 SV=1
Length = 392
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 73/147 (49%), Gaps = 31/147 (21%)
Query: 1 MASSSSSINMIPHTKYDVFLSFREDEIS--------PSLSSA------------------ 34
MASSSS + P T VF+ FR ++ P+L A
Sbjct: 1 MASSSSVVKPTP-TGPQVFICFRGADVRKHFISFLVPALREANINVFIDENEFLGSEMAN 59
Query: 35 ----IEGSKISIVIFSEGYASSRWCLNELVKILEIKNKYGQIVVPVFYRVDPSDVRNQTG 90
IE S++++VIFS + S CLNEL KI E K++ IV+P+FY+V PS V+ G
Sbjct: 60 LLTRIEESELALVIFSVDFTRSHRCLNELAKIKERKDQGRLIVIPIFYKVKPSAVKFLEG 119
Query: 91 TFGDSFSELEERFKEKIDMLQTWRIAM 117
FGD+F LE + + + Q W+ A+
Sbjct: 120 KFGDNFRALERNNRHMLPITQKWKEAL 146
>sp|Q3V5L5|MGT5B_HUMAN Alpha-1,6-mannosylglycoprotein
6-beta-N-acetylglucosaminyltransferase B OS=Homo sapiens
GN=MGAT5B PE=1 SV=2
Length = 792
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 8 INMIPHTKYDVFLSFREDEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILEIKN 67
+ M PHT + F+ F +E++ + I+G K S + G +S W L K L I N
Sbjct: 427 MTMFPHTPDNSFMGFVSEELNETEKRLIKGGKASNMAVVYGKEASIWKLQGKEKFLGILN 486
Query: 68 KYGQIVVPVFYRVD-----PSDVRNQ 88
KY +I V+Y P+ V+N
Sbjct: 487 KYMEIHGTVYYESQRPPEVPAFVKNH 512
>sp|Q9FL92|WRK16_ARATH Probable WRKY transcription factor 16 OS=Arabidopsis thaliana
GN=WRKY16 PE=2 SV=1
Length = 1372
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 17 DVFLSFREDEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILEIKNKYGQIVVPV 76
DVF+ +D +S S +E +++S++I S L++LVK+L+ + Q+VVPV
Sbjct: 35 DVFID-SDDSLSNESQSMVERARVSVMILPGNRTVS---LDKLVKVLDCQKNKDQVVVPV 90
Query: 77 FYRVDPSDVRNQTGTFGDSFSELEERFKEKID 108
Y V S+ + FS + KE D
Sbjct: 91 LYGVRSSETEWLSALDSKGFSSVHHSRKECSD 122
>sp|Q765H6|MGT5B_MOUSE Alpha-1,6-mannosylglycoprotein
6-beta-N-acetylglucosaminyltransferase B OS=Mus musculus
GN=Mgat5b PE=1 SV=1
Length = 792
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 8 INMIPHTKYDVFLSFREDEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILEIKN 67
+ M PHT + F+ F +E++ + I+ K S + G +S W L K L + N
Sbjct: 427 MTMFPHTPDNSFMGFVSEELNETEKQLIKDGKASNMAVVYGKEASIWKLQGKEKFLAVLN 486
Query: 68 KYGQIVVPVFYRVD-----PSDVRNQ 88
KY +I V+Y P+ V+N
Sbjct: 487 KYMEIHGTVYYESQRPPEVPAFVKNH 512
>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana
GN=WRKY19 PE=2 SV=1
Length = 1895
Score = 37.7 bits (86), Expect = 0.023, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 34 AIEGSKISIVIFSEGYASSRWCLNELVKILEIKNKYGQIVVPVFYRVDPSDVRNQTGTFG 93
A+ ++ I++ + Y S L+ ILE ++ ++V P+FYR+ P D + +
Sbjct: 708 ALPKCRVLIIVLTSTYVPS-----NLLNILEHQHTEDRVVYPIFYRLSPYDFVCNSKNY- 761
Query: 94 DSFSELEERFKEKIDMLQTWRIAMREAANLSGF 126
ERF + D + W+ A++E + G+
Sbjct: 762 -------ERFYLQ-DEPKKWQAALKEITQMPGY 786
>sp|Q9FHE5|P2A07_ARATH Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis
thaliana GN=PP2A7 PE=4 SV=1
Length = 332
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 18/78 (23%)
Query: 35 IEGSKISIVIFSEGYASSRWCLNELVKILEIKNKYGQIVVPVFYRVDPSDVRNQTGTFGD 94
I+ SKIS+ IFSE S+ N+L+K N+ +P+FY+VD TG D
Sbjct: 91 IQDSKISLAIFSE----SKCDFNDLLK----NNESADEAIPIFYKVDA------TGDLAD 136
Query: 95 SFSELEERFKEKIDMLQT 112
L+ K K D++ +
Sbjct: 137 ----LQNSVKCKKDLINS 150
>sp|Q731H9|BIOF_BACC1 Putative 8-amino-7-oxononanoate synthase OS=Bacillus cereus (strain
ATCC 10987) GN=bioF PE=3 SV=1
Length = 395
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 61 KILEIKNKYGQIVVPVFYRVDPSDVRNQTGTFGDSFSELEERFKEKIDM 109
+++E+K KYG I++ VD + G+ G S +EE +KID+
Sbjct: 192 ELVELKEKYGAILI-----VDEAHASGIYGSGGAGLSHIEEDLAQKIDI 235
>sp|B9DN94|K6PF_STACT 6-phosphofructokinase OS=Staphylococcus carnosus (strain TM300)
GN=pfkA PE=3 SV=1
Length = 322
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 1 MASSSSSINMIPHTKYDVFLSFREDEISPSLSSAIE-GSKISIVIFSEGYASSRWCLNEL 59
+A + +I ++P K D+ +++ + S I+ G K SIV+ +EG + C +EL
Sbjct: 184 LAVGAETI-IVPEEKVDI------KDVAEKIESGIKRGKKHSIVVVAEGVMGGQLCADEL 236
Query: 60 VKILEI 65
K + +
Sbjct: 237 AKYIHV 242
>sp|P65596|PYRF_STAAW Orotidine 5'-phosphate decarboxylase OS=Staphylococcus aureus
(strain MW2) GN=pyrF PE=3 SV=1
Length = 230
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 8 INMIPHTKYDVFLSFREDEISPSLSSAIEG-SKISIVIFSEGYASSRWCLNELVKILEIK 66
IN I +DVFL + +I ++ A+EG +K+++ + + A ++E +K L
Sbjct: 45 INEIKERGHDVFLDLKLHDIPNTVGKAMEGLAKLNVDLVNVHAAGGVKMMSEAIKGLRKH 104
Query: 67 NKYGQIV 73
N++ +I+
Sbjct: 105 NQHTKII 111
>sp|Q6GA09|PYRF_STAAS Orotidine 5'-phosphate decarboxylase OS=Staphylococcus aureus
(strain MSSA476) GN=pyrF PE=3 SV=2
Length = 230
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 8 INMIPHTKYDVFLSFREDEISPSLSSAIEG-SKISIVIFSEGYASSRWCLNELVKILEIK 66
IN I +DVFL + +I ++ A+EG +K+++ + + A ++E +K L
Sbjct: 45 INEIKERGHDVFLDLKLHDIPNTVGKAMEGLAKLNVDLVNVHAAGGVKMMSEAIKGLRKH 104
Query: 67 NKYGQIV 73
N++ +I+
Sbjct: 105 NQHTKII 111
>sp|Q6GHN1|PYRF_STAAR Orotidine 5'-phosphate decarboxylase OS=Staphylococcus aureus
(strain MRSA252) GN=pyrF PE=3 SV=2
Length = 230
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 8 INMIPHTKYDVFLSFREDEISPSLSSAIEG-SKISIVIFSEGYASSRWCLNELVKILEIK 66
IN I +DVFL + +I ++ A+EG +K+++ + + A ++E +K L
Sbjct: 45 INEIKERGHDVFLDLKLHDIPNTVGKAMEGLAKLNVDLVNVHAAGGVKMMSEAIKGLRKH 104
Query: 67 NKYGQIV 73
N++ +I+
Sbjct: 105 NQHTKII 111
>sp|P99145|PYRF_STAAN Orotidine 5'-phosphate decarboxylase OS=Staphylococcus aureus
(strain N315) GN=pyrF PE=1 SV=1
Length = 230
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 8 INMIPHTKYDVFLSFREDEISPSLSSAIEG-SKISIVIFSEGYASSRWCLNELVKILEIK 66
IN I +DVFL + +I ++ A+EG +K+++ + + A ++E +K L
Sbjct: 45 INEIKERGHDVFLDLKLHDIPNTVGKAMEGLAKLNVDLVNVHAAGGVKMMSEAIKGLRKH 104
Query: 67 NKYGQIV 73
N++ +I+
Sbjct: 105 NQHTKII 111
>sp|P65595|PYRF_STAAM Orotidine 5'-phosphate decarboxylase OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=pyrF PE=1 SV=1
Length = 230
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 8 INMIPHTKYDVFLSFREDEISPSLSSAIEG-SKISIVIFSEGYASSRWCLNELVKILEIK 66
IN I +DVFL + +I ++ A+EG +K+++ + + A ++E +K L
Sbjct: 45 INEIKERGHDVFLDLKLHDIPNTVGKAMEGLAKLNVDLVNVHAAGGVKMMSEAIKGLRKH 104
Query: 67 NKYGQIV 73
N++ +I+
Sbjct: 105 NQHTKII 111
>sp|A7X1F5|PYRF_STAA1 Orotidine 5'-phosphate decarboxylase OS=Staphylococcus aureus
(strain Mu3 / ATCC 700698) GN=pyrF PE=3 SV=1
Length = 230
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 8 INMIPHTKYDVFLSFREDEISPSLSSAIEG-SKISIVIFSEGYASSRWCLNELVKILEIK 66
IN I +DVFL + +I ++ A+EG +K+++ + + A ++E +K L
Sbjct: 45 INEIKERGHDVFLDLKLHDIPNTVGKAMEGLAKLNVDLVNVHAAGGVKMMSEAIKGLRKH 104
Query: 67 NKYGQIV 73
N++ +I+
Sbjct: 105 NQHTKII 111
>sp|P40970|LCB2_YEAST Serine palmitoyltransferase 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=LCB2 PE=1 SV=1
Length = 561
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 19/74 (25%)
Query: 42 IVIFSEGYASSRWCLNELVKILEIKNKY------------------GQIVVPVFYRVDPS 83
I+I +EG S L L K++E+K KY G+ V +F VDP
Sbjct: 297 ILICAEGLFSMEGTLCNLPKLVELKKKYKCYLFIDEAHSIGAMGPTGRGVCEIF-GVDPK 355
Query: 84 DVRNQTGTFGDSFS 97
DV GTF SF
Sbjct: 356 DVDILMGTFTKSFG 369
>sp|Q2YXG4|PYRF_STAAB Orotidine 5'-phosphate decarboxylase OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=pyrF PE=3 SV=1
Length = 230
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 8 INMIPHTKYDVFLSFREDEISPSLSSAIEG-SKISIVIFSEGYASSRWCLNELVKILEIK 66
IN I +DVFL + +I ++ A+EG +K+++ + + A ++E +K L
Sbjct: 45 INEIKERGHDVFLDLKLHDIPNTVGKAMEGLAKLNVDLVNVHAAGGVKMMSEAIKGLRKH 104
Query: 67 NKYGQIV 73
N++ +I+
Sbjct: 105 NEHTKII 111
>sp|P39336|YJGL_ECOLI Uncharacterized protein YjgL OS=Escherichia coli (strain K12)
GN=yjgL PE=4 SV=2
Length = 604
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 99 LEERFKEKIDMLQTWRIAMREAANLSG 125
L + FK+K ++L TWR+ M + A ++G
Sbjct: 15 LADNFKQKSEVLNTWRVGMNDFARIAG 41
>sp|Q6GG08|K6PF_STAAR 6-phosphofructokinase OS=Staphylococcus aureus (strain MRSA252)
GN=pfkA PE=3 SV=1
Length = 322
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 10 MIPHTKYDVFLSFREDEISPSLSSAIE-GSKISIVIFSEGYASSRWCLNELVKILEIKNK 68
++P K D+ EI+ + I+ G K SIV+ +EG +++ C EL + + + N+
Sbjct: 192 VVPEVKTDI------KEIADKIEQGIKRGKKHSIVLVAEGCMTAQDCQKELSQFINVDNR 245
>sp|P65695|K6PF_STAAW 6-phosphofructokinase OS=Staphylococcus aureus (strain MW2) GN=pfkA
PE=3 SV=1
Length = 322
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 10 MIPHTKYDVFLSFREDEISPSLSSAIE-GSKISIVIFSEGYASSRWCLNELVKILEIKNK 68
++P K D+ EI+ + I+ G K SIV+ +EG +++ C EL + + + N+
Sbjct: 192 VVPEVKTDI------KEIADKIEQGIKRGKKHSIVLVAEGCMTAQDCQKELSQYINVDNR 245
>sp|A8Z2L4|K6PF_STAAT 6-phosphofructokinase OS=Staphylococcus aureus (strain USA300 /
TCH1516) GN=pfkA PE=3 SV=1
Length = 322
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 10 MIPHTKYDVFLSFREDEISPSLSSAIE-GSKISIVIFSEGYASSRWCLNELVKILEIKNK 68
++P K D+ EI+ + I+ G K SIV+ +EG +++ C EL + + + N+
Sbjct: 192 VVPEVKTDI------KEIADKIEQGIKRGKKHSIVLVAEGCMTAQDCQKELSQYINVDNR 245
>sp|Q6G8M8|K6PF_STAAS 6-phosphofructokinase OS=Staphylococcus aureus (strain MSSA476)
GN=pfkA PE=3 SV=1
Length = 322
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 10 MIPHTKYDVFLSFREDEISPSLSSAIE-GSKISIVIFSEGYASSRWCLNELVKILEIKNK 68
++P K D+ EI+ + I+ G K SIV+ +EG +++ C EL + + + N+
Sbjct: 192 VVPEVKTDI------KEIADKIEQGIKRGKKHSIVLVAEGCMTAQDCQKELSQYINVDNR 245
>sp|P99165|K6PF_STAAN 6-phosphofructokinase OS=Staphylococcus aureus (strain N315)
GN=pfkA PE=1 SV=1
Length = 322
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 10 MIPHTKYDVFLSFREDEISPSLSSAIE-GSKISIVIFSEGYASSRWCLNELVKILEIKNK 68
++P K D+ EI+ + I+ G K SIV+ +EG +++ C EL + + + N+
Sbjct: 192 VVPEVKTDI------KEIADKIEQGIKRGKKHSIVLVAEGCMTAQDCQKELSQYINVDNR 245
>sp|P65694|K6PF_STAAM 6-phosphofructokinase OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=pfkA PE=1 SV=1
Length = 322
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 10 MIPHTKYDVFLSFREDEISPSLSSAIE-GSKISIVIFSEGYASSRWCLNELVKILEIKNK 68
++P K D+ EI+ + I+ G K SIV+ +EG +++ C EL + + + N+
Sbjct: 192 VVPEVKTDI------KEIADKIEQGIKRGKKHSIVLVAEGCMTAQDCQKELSQYINVDNR 245
>sp|A6QHN3|K6PF_STAAE 6-phosphofructokinase OS=Staphylococcus aureus (strain Newman)
GN=pfkA PE=3 SV=1
Length = 322
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 10 MIPHTKYDVFLSFREDEISPSLSSAIE-GSKISIVIFSEGYASSRWCLNELVKILEIKNK 68
++P K D+ EI+ + I+ G K SIV+ +EG +++ C EL + + + N+
Sbjct: 192 VVPEVKTDI------KEIADKIEQGIKRGKKHSIVLVAEGCMTAQDCQKELSQYINVDNR 245
>sp|Q5HF75|K6PF_STAAC 6-phosphofructokinase OS=Staphylococcus aureus (strain COL) GN=pfkA
PE=3 SV=1
Length = 322
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 10 MIPHTKYDVFLSFREDEISPSLSSAIE-GSKISIVIFSEGYASSRWCLNELVKILEIKNK 68
++P K D+ EI+ + I+ G K SIV+ +EG +++ C EL + + + N+
Sbjct: 192 VVPEVKTDI------KEIADKIEQGIKRGKKHSIVLVAEGCMTAQDCQKELSQYINVDNR 245
>sp|Q2YTE2|K6PF_STAAB 6-phosphofructokinase OS=Staphylococcus aureus (strain bovine RF122
/ ET3-1) GN=pfkA PE=3 SV=1
Length = 322
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 10 MIPHTKYDVFLSFREDEISPSLSSAIE-GSKISIVIFSEGYASSRWCLNELVKILEIKNK 68
++P K D+ EI+ + I+ G K SIV+ +EG +++ C EL + + + N+
Sbjct: 192 VVPEVKTDI------KEIADKIEQGIKRGKKHSIVLVAEGCMTAQDCQKELSQYINVDNR 245
>sp|A5ITM2|K6PF_STAA9 6-phosphofructokinase OS=Staphylococcus aureus (strain JH9) GN=pfkA
PE=3 SV=1
Length = 322
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 10 MIPHTKYDVFLSFREDEISPSLSSAIE-GSKISIVIFSEGYASSRWCLNELVKILEIKNK 68
++P K D+ EI+ + I+ G K SIV+ +EG +++ C EL + + + N+
Sbjct: 192 VVPEVKTDI------KEIADKIEQGIKRGKKHSIVLVAEGCMTAQDCQKELSQYINVDNR 245
>sp|A6U2G5|K6PF_STAA2 6-phosphofructokinase OS=Staphylococcus aureus (strain JH1) GN=pfkA
PE=3 SV=1
Length = 322
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 10 MIPHTKYDVFLSFREDEISPSLSSAIE-GSKISIVIFSEGYASSRWCLNELVKILEIKNK 68
++P K D+ EI+ + I+ G K SIV+ +EG +++ C EL + + + N+
Sbjct: 192 VVPEVKTDI------KEIADKIEQGIKRGKKHSIVLVAEGCMTAQDCQKELSQYINVDNR 245
>sp|Q9DGV6|VG06A_GAHVM Uncharacterized gene 6a protein OS=Gallid herpesvirus 2 (strain
Chicken/Md5/ATCC VR-987) GN=MDV006 PE=4 SV=1
Length = 85
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 75 PVFY-RVDPSDVRNQTGTFGDSFSELEERFKEKIDMLQTWR 114
P F+ D + RN T +FGD ER + I TWR
Sbjct: 23 PTFHLETDTATTRNGTSSFGDRIRSFCERARSLISNFVTWR 63
>sp|Q77MT3|VG06B_GAHVM Uncharacterized gene 6b protein OS=Gallid herpesvirus 2 (strain
Chicken/Md5/ATCC VR-987) GN=MDV006 PE=4 SV=1
Length = 93
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 75 PVFY-RVDPSDVRNQTGTFGDSFSELEERFKEKIDMLQTWR 114
P F+ D + RN T +FGD ER + I TWR
Sbjct: 31 PTFHLETDTATTRNGTSSFGDRIRSFCERARSLISNFVTWR 71
>sp|Q92H76|SCO22_RICCN SCO2-like protein RC0895 OS=Rickettsia conorii (strain ATCC VR-613
/ Malish 7) GN=RC0895 PE=3 SV=1
Length = 205
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%)
Query: 56 LNELVKILEIKNKYGQIVVPVFYRVDP 82
LN++ +I+EI NK+ ++PVF +DP
Sbjct: 90 LNKMTEIVEILNKHKIDILPVFITIDP 116
>sp|Q4UKW2|SCO22_RICFE SCO2-like protein RF_0960 OS=Rickettsia felis (strain ATCC VR-1525
/ URRWXCal2) GN=RF_0960 PE=3 SV=1
Length = 205
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Query: 22 FREDEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILEIKNKYGQIVVPVFYRVD 81
F DE+ +LS G F+ LN++ +I+EI NK+ ++PVF +D
Sbjct: 63 FNSDELKGNLSLIYFG-------FTSCPDICPTSLNKMTEIVEILNKHKIDILPVFITID 115
Query: 82 P 82
P
Sbjct: 116 P 116
>sp|Q6FF12|PNP_ACIAD Polyribonucleotide nucleotidyltransferase OS=Acinetobacter sp.
(strain ADP1) GN=pnp PE=3 SV=1
Length = 697
Score = 29.3 bits (64), Expect = 8.3, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 35 IEG--SKISIVIFSEGYASSRWCLNELVKILEIKNKYGQIVVPVF--YRVDPSDVRNQTG 90
IEG +I V ++ YA LNE+ K++ P F ++P +R+ G
Sbjct: 513 IEGITEEIMEVALNQAYAGRMHILNEMNKVISRARAEISAHAPTFEVITINPDKIRDVIG 572
Query: 91 TFGDSFSELEERFKEKIDM 109
G + ++ E K ID+
Sbjct: 573 KGGATIRQITEETKAAIDI 591
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,843,210
Number of Sequences: 539616
Number of extensions: 1713733
Number of successful extensions: 4189
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 4166
Number of HSP's gapped (non-prelim): 51
length of query: 132
length of database: 191,569,459
effective HSP length: 98
effective length of query: 34
effective length of database: 138,687,091
effective search space: 4715361094
effective search space used: 4715361094
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)