BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042985
(122 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2O7R|A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With
Acyl Adduct
pdb|2O7V|A Chain A, Carboxylesterase Aecxe1 From Actinidia Eriantha Covalently
Inhibited By Paraoxon
Length = 338
Score = 131 bits (329), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 85/120 (70%), Gaps = 3/120 (2%)
Query: 3 IVNADGTITRDYSNYPSTAATPDPNDHTIAVSKDVPVNQSNKTWVRIFLPRQALDSSTKT 62
++N D TITR PSTAA+PDP + ++KD+ +N + T+VR+FLPR AL +S K
Sbjct: 25 VLNPDRTITRPI-QIPSTAASPDPTSSSPVLTKDLALNPLHNTFVRLFLPRHALYNSAK- 82
Query: 63 KLPLIVYVHGGALILLSAATKIYHDLCSDIAARVPAVIVSVDYRLAPEHRLPAAYYDALE 122
LPL+VY HGG IL SAA+ I+HD C ++A VI SVDYRLAPEHRLPAAY DA+E
Sbjct: 83 -LPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHRLPAAYDDAME 141
>pdb|3EBL|A Chain A, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|B Chain B, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|C Chain C, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|D Chain D, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|E Chain E, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|F Chain F, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3ED1|A Chain A, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|B Chain B, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|C Chain C, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|D Chain D, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|E Chain E, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|F Chain F, Crystal Structure Of Rice Gid1 Complexed With Ga3
Length = 365
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 55/133 (41%), Gaps = 18/133 (13%)
Query: 6 ADGTITRDYSNYPSTAATPDPNDHTIAVSKDVPVNQSNKTWVRIFLPRQALDSSTKTK-- 63
ADGT RD Y + S D ++QS VRI+ D+
Sbjct: 36 ADGTFERDLGEYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAV 95
Query: 64 ----------------LPLIVYVHGGALILLSAATKIYHDLCSDIAARVPAVIVSVDYRL 107
P+I++ HGG+ + SA++ IY LC V+VSV+YR
Sbjct: 96 TRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRR 155
Query: 108 APEHRLPAAYYDA 120
APEHR P AY D
Sbjct: 156 APEHRYPCAYDDG 168
>pdb|2YH2|A Chain A, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|B Chain B, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|C Chain C, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|D Chain D, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|3ZWQ|A Chain A, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
pdb|3ZWQ|B Chain B, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
Length = 313
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 10/74 (13%)
Query: 48 RIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATKIYHD-LCSDIAARVPAVIVSVDYR 106
R++ PR +LP +VY HGG +L S T HD +C +A AV+VSVDYR
Sbjct: 66 RVYRPRDG------ERLPAVVYYHGGGFVLGSVET---HDHVCRRLANLSGAVVVSVDYR 116
Query: 107 LAPEHRLPAAYYDA 120
LAPEH+ PAA DA
Sbjct: 117 LAPEHKFPAAVEDA 130
>pdb|1JJI|A Chain A, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|B Chain B, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|C Chain C, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|D Chain D, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
Length = 311
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 10/75 (13%)
Query: 47 VRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATKIYHD-LCSDIAARVPAVIVSVDY 105
+R+ + +Q DS P++VY HGG ++ S + HD LC IA + +VSVDY
Sbjct: 68 IRVRVYQQKPDS------PVLVYYHGGGFVICSIES---HDALCRRIARLSNSTVVSVDY 118
Query: 106 RLAPEHRLPAAYYDA 120
RLAPEH+ PAA YD
Sbjct: 119 RLAPEHKFPAAVYDC 133
>pdb|2C7B|A Chain A, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
pdb|2C7B|B Chain B, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
Length = 311
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 15/103 (14%)
Query: 20 TAATPDPNDHTIAVSKDVPVNQSNKT-WVRIFLPRQALDSSTKTKLPLIVYVHGGALILL 78
TAA +P IA ++DV + S + R++ P++A LP ++Y HGG +
Sbjct: 38 TAAVQEP----IAETRDVHIPVSGGSIRARVYFPKKA------AGLPAVLYYHGGGFVFG 87
Query: 79 SAATKIYHD-LCSDIAARVPAVIVSVDYRLAPEHRLPAAYYDA 120
S T HD +C ++ +V+VSVDYRLAPE++ P A DA
Sbjct: 88 SIET---HDHICRRLSRLSDSVVVSVDYRLAPEYKFPTAVEDA 127
>pdb|2ZSH|A Chain A, Structural Basis Of Gibberellin(Ga3)-Induced Della
Recognition By The Gibberellin Receptor
pdb|2ZSI|A Chain A, Structural Basis Of Gibberellin(Ga4)-Induced Della
Recognition By The Gibberellin Receptor
Length = 351
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 7 DGTITRDYSNYPSTAATPDPNDHTIAVSKDVPVNQSNKTWVRIFLPRQALDSSTKTKL-- 64
DGT R + Y T + N S DV +++ R++ P A + L
Sbjct: 45 DGTFNRHLAEYLDRKVTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDL 104
Query: 65 ---------PLIVYVHGGALILLSAATKIYHDLCSDIAARVPAVIVSVDYRLAPEHRLPA 115
P+I++ HGG+ SA + IY LC + V+VSV+YR APE+ P
Sbjct: 105 EKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPC 164
Query: 116 AYYDA 120
AY D
Sbjct: 165 AYDDG 169
>pdb|3QH4|A Chain A, Crystal Structure Of Esterase Lipw From Mycobacterium
Marinum
Length = 317
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 62 TKLPLIVYVHGGALILLSAATKIYHDLCSDIAARVPAVIVSVDYRLAPEHRLPAAYYDAL 121
T P++VY H G L + T H C ++A R +VSVDYRLAPEH PAA +DA+
Sbjct: 83 TPAPVVVYCHAGGFALGNLDTD--HRQCLELARRARCAVVSVDYRLAPEHPYPAALHDAI 140
Query: 122 E 122
E
Sbjct: 141 E 141
>pdb|3AIN|A Chain A, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|B Chain B, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|C Chain C, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|D Chain D, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 37 VPVNQSNKTWVRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATKIYHDLCSDIAARV 96
+P +++N R++ P+ T+ ++VY HGG +L + Y LC I
Sbjct: 70 IPGSETN-IKARVYYPK------TQGPYGVLVYYHGGGFVL--GDIESYDPLCRAITNSC 120
Query: 97 PAVIVSVDYRLAPEHRLPAAYYDALE 122
V +SVDYRLAPE++ PAA D+ +
Sbjct: 121 QCVTISVDYRLAPENKFPAAVVDSFD 146
>pdb|3AIM|A Chain A, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|B Chain B, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|C Chain C, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|D Chain D, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 37 VPVNQSNKTWVRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATKIYHDLCSDIAARV 96
+P +++N R++ P+ T+ ++VY HGG +L + Y LC I
Sbjct: 70 IPGSETN-IKARVYYPK------TQGPYGVLVYYHGGGFVL--GDIESYDPLCRAITNSC 120
Query: 97 PAVIVSVDYRLAPEHRLPAAYYDALE 122
V +SVDYRLAPE++ PAA D+ +
Sbjct: 121 QCVTISVDYRLAPENKFPAAVVDSFD 146
>pdb|3AIO|A Chain A, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|B Chain B, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|C Chain C, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|D Chain D, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 37 VPVNQSNKTWVRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATKIYHDLCSDIAARV 96
+P +++N R++ P+ T+ ++VY HGG +L + Y LC I
Sbjct: 70 IPGSETN-IKARVYYPK------TQGPYGVLVYYHGGGFVL--GDIESYDPLCRAITNSC 120
Query: 97 PAVIVSVDYRLAPEHRLPAAYYDALE 122
V +SVDYRLAPE++ PAA D+ +
Sbjct: 121 QCVTISVDYRLAPENKFPAAVVDSFD 146
>pdb|3AIK|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIL|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
Length = 323
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 37 VPVNQSNKTWVRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATKIYHDLCSDIAARV 96
+P +++N R++ P+ T+ ++VY HGG +L + Y LC I
Sbjct: 70 IPGSETN-IKARVYYPK------TQGPYGVLVYYHGGGFVL--GDIESYDPLCRAITNSC 120
Query: 97 PAVIVSVDYRLAPEHRLPAAYYDALE 122
V +SVDYRLAPE++ PAA D+ +
Sbjct: 121 QCVTISVDYRLAPENKFPAAVVDSFD 146
>pdb|1QZ3|A Chain A, Crystal Structure Of Mutant M211sR215L OF CARBOXYLESTERASE
Est2 Complexed With Hexadecanesulfonate
pdb|1U4N|A Chain A, Crystal Structure Analysis Of The M211sR215L EST2 MUTANT
Length = 310
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 12/80 (15%)
Query: 47 VRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATKIYHD-LCSDIAARVPAVIVSVDY 105
VR++ P + P +VY HGG ++ T HD +C +A AV+ SVDY
Sbjct: 62 VRMYRP-----EGVEPPYPALVYYHGGGWVVGDLET---HDPVCRVLAKDGRAVVFSVDY 113
Query: 106 RLAPEHRLPAAY---YDALE 122
RLAPEH+ PAA YDAL+
Sbjct: 114 RLAPEHKFPAAVEDAYDALQ 133
>pdb|2HM7|A Chain A, Crystal Structure Analysis Of The G84s Est2 Mutant
Length = 310
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 12/80 (15%)
Query: 47 VRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATKIYHD-LCSDIAARVPAVIVSVDY 105
VR++ P + P +VY HGG+ ++ T HD +C +A AV+ SVDY
Sbjct: 62 VRMYRP-----EGVEPPYPALVYYHGGSWVVGDLET---HDPVCRVLAKDGRAVVFSVDY 113
Query: 106 RLAPEHRLPAAY---YDALE 122
RLAPEH+ PAA YDAL+
Sbjct: 114 RLAPEHKFPAAVEDAYDALQ 133
>pdb|1EVQ|A Chain A, The Crystal Structure Of The Thermophilic Carboxylesterase
Est2 From Alicyclobacillus Acidocaldarius
Length = 310
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 49/98 (50%), Gaps = 16/98 (16%)
Query: 38 PVNQSNKTWVRIF---LPRQALD------SSTKTKLPLIVYVHGGALILLSAATKIYHD- 87
PV + VR F LP + L + P +VY HGG ++ T HD
Sbjct: 39 PVKKEPVAEVREFDXDLPGRTLKVRXYRPEGVEPPYPALVYYHGGGWVVGDLET---HDP 95
Query: 88 LCSDIAARVPAVIVSVDYRLAPEHRLPAAY---YDALE 122
+C +A AV+ SVDYRLAPEH+ PAA YDAL+
Sbjct: 96 VCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQ 133
>pdb|1C7I|A Chain A, Thermophylic Pnb Esterase
Length = 489
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 24 PDPNDHTIAVSKDVPVNQSNKTWVRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATK 83
P P+D K++P + +V +F P + LP++V++HGGA L + +
Sbjct: 62 PQPSDLLSLSYKELPRQSEDCLYVNVFAP-----DTPSQNLPVMVWIHGGAFYLGAGSEP 116
Query: 84 IYHDLCSDIAARVPAVIVSVDYRLAP 109
+Y S +AA+ ++V+++YRL P
Sbjct: 117 LYDG--SKLAAQGEVIVVTLNYRLGP 140
>pdb|1JKM|B Chain B, Brefeldin A Esterase, A Bacterial Homologue Of Human
Hormone Sensitive Lipase
pdb|1JKM|A Chain A, Brefeldin A Esterase, A Bacterial Homologue Of Human
Hormone Sensitive Lipase
Length = 361
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 42 SNKTWVRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATKIYHDLCSDIAARVPAVIV 101
N+ + +F P + + LP +VY HGG + +L+ +++ C+D+AA +V+V
Sbjct: 92 GNEITLHVFRP-----AGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAA-AGSVVV 145
Query: 102 SVDYRLA----PEHRLPAAYYDAL 121
VD+R A H P+ D L
Sbjct: 146 MVDFRNAWTAEGHHPFPSGVEDCL 169
>pdb|1QE3|A Chain A, Pnb Esterase
Length = 489
Score = 44.3 bits (103), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 24 PDPNDHTIAVSKDVPVNQSNKTWVRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATK 83
P P+D ++P + +V +F P + LP++V++HGGA L + +
Sbjct: 62 PQPSDLLSLSYTELPRQSEDCLYVNVFAP-----DTPSQNLPVMVWIHGGAFYLGAGSEP 116
Query: 84 IYHDLCSDIAARVPAVIVSVDYRLAPEHRLPAAYYD 119
+Y S +AA+ ++V+++YRL P L + +D
Sbjct: 117 LYDG--SKLAAQGEVIVVTLNYRLGPFGFLHLSSFD 150
>pdb|1C7J|A Chain A, Pnb Esterase 56c8
Length = 489
Score = 43.9 bits (102), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 24 PDPNDHTIAVSKDVPVNQSNKTWVRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATK 83
P P+D ++P + +V +F P + LP++V++HGGA L + +
Sbjct: 62 PQPSDLLSLSYTELPRQSEDCLYVNVFAP-----DTPSQNLPVMVWIHGGAFYLGAGSEP 116
Query: 84 IYHDLCSDIAARVPAVIVSVDYRLAP 109
+Y S +AA+ ++V+++YRL P
Sbjct: 117 LYDG--SKLAAQGEVIVVTLNYRLGP 140
>pdb|3DNM|A Chain A, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|B Chain B, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|C Chain C, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|D Chain D, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
Length = 336
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 53 RQALDSSTKTKLPLIVYVHGGALILLSAATKIYHDLCSDIAARVPAVIVSVDYRLAPEHR 112
RQA D + I+Y HGG I S +T + L + +A + A + S+DYRLAPE+
Sbjct: 86 RQATDGAGAAH---ILYFHGGGYISGSPSTHLV--LTTQLAKQSSATLWSLDYRLAPENP 140
Query: 113 LPAAYYDAL 121
PAA D +
Sbjct: 141 FPAAVDDCV 149
>pdb|3K6K|A Chain A, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|B Chain B, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|C Chain C, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|D Chain D, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
Length = 322
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 53 RQALDSSTKTKLPLIVYVHGGALILLSAATKIYHDLCSDIAARVPAVIVSVDYRLAPEHR 112
RQA D + I+Y HGG I S +T + L + +A + A + S+DYRLAPE+
Sbjct: 72 RQATDGAGAAH---ILYFHGGGYISGSPSTHLV--LTTQLAKQSSATLWSLDYRLAPENP 126
Query: 113 LPAAYYDAL 121
PAA D +
Sbjct: 127 FPAAVDDCV 135
>pdb|3FAK|A Chain A, Structural And Functional Analysis Of A Hormone-Sensitive
Lipase Like Este5 From A Metagenome Library
pdb|3G9T|A Chain A, Crystal Structure Of Este5, Was Soaked By P-Nitrophenyl
Butyrate For 5sec
pdb|3G9U|A Chain A, Crystal Structure Of Este5, Was Soaked By P-nitrophenyl
Butyrate For 5min
pdb|3G9Z|A Chain A, Crystal Structure Of Este5, Was Soaked By P-Nitrophenyl
Caprylate
pdb|3H17|A Chain A, Crystal Structure Of Este5-Pmsf (I)
pdb|3H18|A Chain A, Crystal Structure Of Este5-pmsf (ii)
pdb|3H19|A Chain A, Crystal Structure Of Este5, Was Soaked By Methyl Alcohol
pdb|3H1A|A Chain A, Crystal Structure Of Este5, Was Soaked By Ethyl Alcohol
pdb|3H1B|A Chain A, Crystal Structure Of Este5, Was Soaked By Isopropyl
Alcohol
pdb|3L1H|A Chain A, Crystal Structure Of Este5, Was Soaked By Fecl3
pdb|3L1I|A Chain A, Crystal Structure Of Este5, Was Soaked By Cuso4
pdb|3L1J|A Chain A, Crystal Structure Of Este5, Was Soaked By Znso4
Length = 322
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 67 IVYVHGGALILLSAATKIYHDLCSDIAARVPAVIVSVDYRLAPEHRLPAAYYDAL 121
I+Y+HGG ++ S T + + +I+ A + +DYRLAPEH PAA D +
Sbjct: 83 ILYLHGGGYVMGSINT--HRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGV 135
>pdb|3V9A|A Chain A, Crystal Structure Of EsteraseLIPASE FROM UNCULTURED
BACTERIUM
Length = 309
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 67 IVYVHGGALILLSAATKIYHDLCSDIAARVPAVIVSVDYRLAPEHRLPAAYYDAL 121
I+Y+HGG ++ S T + + +I+ A + +DYRLAPEH PAA D +
Sbjct: 70 ILYLHGGGYVMGSINT--HRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGV 122
>pdb|3K9B|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
Length = 529
Score = 39.3 bits (90), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 35 KDVPVNQSNKT-WVRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATKIYHDLCSDIA 93
+++P+ S ++ I+ P D + K +LP++V++HGG L++ +A+T Y L +A
Sbjct: 83 ENIPLKLSEDCLYLNIYTPA---DLTKKNRLPVMVWIHGGGLMVGAAST--YDGLA--LA 135
Query: 94 ARVPAVIVSVDYRLA 108
A V+V++ YRL
Sbjct: 136 AHENVVVVTIQYRLG 150
>pdb|1YA4|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA8|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YAH|A Chain A, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|B Chain B, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|C Chain C, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAJ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|2HRQ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRR|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|4AB1|A Chain A, Recombinant Human Carboxylesterase 1 From Whole Cabbage
Loopers
Length = 532
Score = 39.3 bits (90), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 35 KDVPVNQSNKT-WVRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATKIYHDLCSDIA 93
+++P+ S ++ I+ P D + K +LP++V++HGG L++ +A+T Y L +A
Sbjct: 86 ENIPLKLSEDCLYLNIYTPA---DLTKKNRLPVMVWIHGGGLMVGAAST--YDGLA--LA 138
Query: 94 ARVPAVIVSVDYRLA 108
A V+V++ YRL
Sbjct: 139 AHENVVVVTIQYRLG 153
>pdb|1MX1|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX5|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX9|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
Length = 548
Score = 38.9 bits (89), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 35 KDVPVNQSNKT-WVRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATKIYHDLCSDIA 93
+++P+ S ++ I+ P D + K +LP++V++HGG L++ +A+T Y L +A
Sbjct: 88 ENIPLKLSEDCLYLNIYTPA---DLTKKNRLPVMVWIHGGGLMVGAAST--YDGLA--LA 140
Query: 94 ARVPAVIVSVDYRLA 108
A V+V++ YRL
Sbjct: 141 AHENVVVVTIQYRLG 155
>pdb|2DQY|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQZ|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DR0|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2H7C|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|D Chain D, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|E Chain E, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|F Chain F, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
Length = 542
Score = 38.9 bits (89), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 35 KDVPVNQSNKT-WVRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATKIYHDLCSDIA 93
+++P+ S ++ I+ P D + K +LP++V++HGG L++ +A+T Y L +A
Sbjct: 88 ENIPLKLSEDCLYLNIYTPA---DLTKKNRLPVMVWIHGGGLMVGAAST--YDGLA--LA 140
Query: 94 ARVPAVIVSVDYRLA 108
A V+V++ YRL
Sbjct: 141 AHENVVVVTIQYRLG 155
>pdb|1LZK|A Chain A, Bacterial Heroin Esterase Complex With Transition State
Analog Dimethylarsenic Acid
Length = 323
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 59 STKTKLPLIVYVHGGALILLSAATKIYHDLCSDIAARVPAVIVSVDYRLAPEHRLPAAYY 118
+T +P+++++HGG + +A + C ++A + + +V+YRLAPE P
Sbjct: 74 NTAGPVPVLLWIHGGGFAIGTAESS--DPFCVEVARELGFAVANVEYRLAPETTFPGPVN 131
Query: 119 D 119
D
Sbjct: 132 D 132
>pdb|1LZL|A Chain A, Bacterial Heroin Esterase
Length = 323
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 59 STKTKLPLIVYVHGGALILLSAATKIYHDLCSDIAARVPAVIVSVDYRLAPEHRLPAAYY 118
+T +P+++++HGG + +A + C ++A + + +V+YRLAPE P
Sbjct: 74 NTAGPVPVLLWIHGGGFAIGTAESS--DPFCVEVARELGFAVANVEYRLAPETTFPGPVN 131
Query: 119 D 119
D
Sbjct: 132 D 132
>pdb|1K4Y|A Chain A, Crystal Structure Of Rabbit Liver Carboxylesterase In
Complex With 4- Piperidino-Piperidine
Length = 534
Score = 36.2 bits (82), Expect = 0.005, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 55/103 (53%), Gaps = 13/103 (12%)
Query: 12 RDYSNYPSTAATPDPNDHTIAV-----SKDVPVNQSNKT-WVRIFLPRQALDSSTKTKLP 65
++ ++YP + + H ++ +++P+ S ++ I+ P D + + +LP
Sbjct: 56 KNTTSYPPMCSQDAVSGHMLSELFTNRKENIPLKFSEDCLYLNIYTPA---DLTKRGRLP 112
Query: 66 LIVYVHGGALILLSAATKIYHDLCSDIAARVPAVIVSVDYRLA 108
++V++HGG L++ A+T Y L ++A V+V++ YRL
Sbjct: 113 VMVWIHGGGLMVGGAST--YDGLA--LSAHENVVVVTIQYRLG 151
>pdb|3GA7|A Chain A, 1.55 Angstrom Crystal Structure Of An Acetyl Esterase From
Salmonella Typhimurium
Length = 326
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 56 LDSSTKTKLPLIVYVHGGALILLSAATKIYHDLCSDIAAR-VPAVIVSVDYRLAPEHRLP 114
L S T + Y+HGG IL + T HD + AR ++ +DY L+P+ R P
Sbjct: 79 LYSPQPTSQATLYYLHGGGFILGNLDT---HDRIXRLLARYTGCTVIGIDYSLSPQARYP 135
Query: 115 AA 116
A
Sbjct: 136 QA 137
>pdb|1THG|A Chain A, 1.8 Angstroms Refined Structure Of The Lipase From
Geotrichum Candidum
Length = 544
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 63 KLPLIVYVHGGALILLSAATKIYHDLCSD-IAARVPAVIVSVDYRLAP 109
KLP++V+++GGA + S+A + + I P V VS++YR P
Sbjct: 121 KLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGP 168
>pdb|1F6W|A Chain A, Structure Of The Catalytic Domain Of Human Bile Salt
Activated Lipase
Length = 533
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/81 (20%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 33 VSKDVPVNQSNKTWVRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATKIYHDL---- 88
+++D + ++ I++P+ S LP++++++GGA ++ S + +
Sbjct: 69 ITQDSTYGDEDCLYLNIWVPQGRKQVSRD--LPVMIWIYGGAFLMGSGHGANFLNNYLYD 126
Query: 89 CSDIAARVPAVIVSVDYRLAP 109
+IA R ++V+ +YR+ P
Sbjct: 127 GEEIATRGNVIVVTFNYRVGP 147
>pdb|1DX4|A Chain A, Ache From Drosophila Melanogaster Complex With Tacrine
Derivative
9-(3-Phenylmethylamino)-1,2,3,4-Tetrahydroacridine
pdb|1QO9|A Chain A, Native Acetylcholinesterase From Drosophila Melanogaster
pdb|1QON|A Chain A, Ache From Drosophila Melanogaster Complex With Tacrine
Derivative
9-(3-Iodobenzylamino)-1,2,3,4-Tetrahydroacridine
Length = 585
Score = 32.7 bits (73), Expect = 0.055, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 14/68 (20%)
Query: 59 STKTKLPLIVYVHGGALILLSAATKIYHDLCSDIAARVPAVIV-SVDYR--------LAP 109
+T LP++++++GG + SA IY+ +DI A V VIV S YR LAP
Sbjct: 136 NTTNGLPILIWIYGGGFMTGSATLDIYN---ADIMAAVGNVIVASFQYRVGAFGFLHLAP 192
Query: 110 EHRLPAAY 117
E +P+ +
Sbjct: 193 E--MPSEF 198
>pdb|1JMY|A Chain A, Truncated Recombinant Human Bile Salt Stimulated Lipase
Length = 522
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/81 (20%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 33 VSKDVPVNQSNKTWVRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATKIYHDL---- 88
+++D + ++ I++P+ S LP++++++GGA ++ S + +
Sbjct: 69 ITQDSTYGDEDCLYLNIWVPQGRKQVSRD--LPVMIWIYGGAFLMGSGHGANFLNNYLYD 126
Query: 89 CSDIAARVPAVIVSVDYRLAP 109
+IA R ++V+ +YR+ P
Sbjct: 127 GEEIATRGNVIVVTFNYRVGP 147
>pdb|1AQL|A Chain A, Crystal Structure Of Bovine Bile-Salt Activated Lipase
Complexed With Taurocholate
pdb|1AQL|B Chain B, Crystal Structure Of Bovine Bile-Salt Activated Lipase
Complexed With Taurocholate
Length = 532
Score = 32.0 bits (71), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/82 (20%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 33 VSKDVPVNQSNKTWVRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATKIY-----HD 87
+++D + ++ I++P+ + S LP++++++GGA ++ ++ + +D
Sbjct: 69 LTQDSTYGNEDCLYLNIWVPQGRKEVSHD--LPVMIWIYGGAFLMGASQGANFLSNYLYD 126
Query: 88 LCSDIAARVPAVIVSVDYRLAP 109
+IA R ++V+ +YR+ P
Sbjct: 127 -GEEIATRGNVIVVTFNYRVGP 147
>pdb|2BCE|A Chain A, Cholesterol Esterase From Bos Taurus
Length = 579
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/82 (20%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 33 VSKDVPVNQSNKTWVRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATKIY-----HD 87
+++D + ++ I++P+ + S LP++++++GGA ++ ++ + +D
Sbjct: 69 LTQDSTYGNEDCLYLNIWVPQGRKEVSHD--LPVMIWIYGGAFLMGASQGANFLSNYLYD 126
Query: 88 LCSDIAARVPAVIVSVDYRLAP 109
+IA R ++V+ +YR+ P
Sbjct: 127 -GEEIATRGNVIVVTFNYRVGP 147
>pdb|1AKN|A Chain A, Structure Of Bile-salt Activated Lipase
Length = 579
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/82 (20%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 33 VSKDVPVNQSNKTWVRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATKIY-----HD 87
+++D + ++ I++P+ + S LP++++++GGA ++ ++ + +D
Sbjct: 69 LTQDSTYGNEDCLYLNIWVPQGRKEVSHD--LPVMIWIYGGAFLMGASQGANFLSNYLYD 126
Query: 88 LCSDIAARVPAVIVSVDYRLAP 109
+IA R ++V+ +YR+ P
Sbjct: 127 -GEEIATRGNVIVVTFNYRVGP 147
>pdb|2FJ0|A Chain A, Crystal Structure Of Juvenile Hormone Esterase From
Manduca Sexta, With Otfp Covalently Attached
Length = 551
Score = 31.6 bits (70), Expect = 0.12, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 51 LPRQALDSSTKTKLPLIVYVHGGALILLSAATKIYHDLCSDIAARVPAVIVSVDYRL 107
LPR A D + LP++V++HGG S + ++ + ++++ +YRL
Sbjct: 102 LPRDAADKNRFAGLPVLVFIHGGGFAFGSGDSDLHG---PEYLVSKDVIVITFNYRL 155
>pdb|4E14|A Chain A, Crystal Structure Of Kynurenine Formamidase Conjugated
With Phenylmethylsulfonyl Fluoride
pdb|4E15|A Chain A, Crystal Structure Of Kynurenine Formamidase Conjugated
With An Inhibitor
pdb|4E15|B Chain B, Crystal Structure Of Kynurenine Formamidase Conjugated
With An Inhibitor
Length = 303
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 49/121 (40%), Gaps = 27/121 (22%)
Query: 10 ITRDYSNYPSTAAT-----PDPN----DHTIAVSKDVPVNQSNKTWV-----RIFLPRQA 55
+ RDY +PS T P+PN +H + V+K + K + R RQ
Sbjct: 12 LDRDY--FPSYHTTRFQDQPEPNLAVLEHFVRVTKQHGRELTEKQGITVDHLRYGEGRQL 69
Query: 56 LD----SSTKTKLPLIVYVHGGALILLSAATKIYHDLCSDIA--ARVPAVIVSVDYRLAP 109
+D T + PL V+VHGG + + CS + R + +DY L P
Sbjct: 70 VDVFYSEKTTNQAPLFVFVHGGYWQEMDMSMS-----CSIVGPLVRRGYRVAVMDYNLCP 124
Query: 110 E 110
+
Sbjct: 125 Q 125
>pdb|4E11|A Chain A, Crystal Structure Of Kynurenine Formamidase From
Drosophila Melanogaster
Length = 303
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 49/121 (40%), Gaps = 27/121 (22%)
Query: 10 ITRDYSNYPSTAAT-----PDPN----DHTIAVSKDVPVNQSNKTWV-----RIFLPRQA 55
+ RDY +PS T P+PN +H + V+K + K + R RQ
Sbjct: 12 LDRDY--FPSYHTTRFQDQPEPNLAVLEHFVRVTKQHGRELTEKQGITVDHLRYGEGRQL 69
Query: 56 LD----SSTKTKLPLIVYVHGGALILLSAATKIYHDLCSDIA--ARVPAVIVSVDYRLAP 109
+D T + PL V+VHGG + + CS + R + +DY L P
Sbjct: 70 VDVFYSEKTTNQAPLFVFVHGGYWQEMDMSMS-----CSIVGPLVRRGYRVAVMDYNLCP 124
Query: 110 E 110
+
Sbjct: 125 Q 125
>pdb|1VKH|A Chain A, Crystal Structure Of A Putative Serine Hydrolase (Ydr428c)
From Saccharomyces Cerevisiae At 1.85 A Resolution
pdb|1VKH|B Chain B, Crystal Structure Of A Putative Serine Hydrolase (Ydr428c)
From Saccharomyces Cerevisiae At 1.85 A Resolution
Length = 273
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
Query: 32 AVSKDVPVNQSNKTWVRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATKIYHDLCSD 91
A+S D+ + NKT L Q + +T+ ++Y+HGGA ++ L +
Sbjct: 19 AISPDITL--FNKT-----LTFQEISQNTREA---VIYIHGGAWNDPENTPNDFNQLANT 68
Query: 92 IAARVPAVIV---SVDYRLAPEHRLPAAYYDAL 121
I + V S++YRL+PE P YDA+
Sbjct: 69 IKSXDTESTVCQYSIEYRLSPEITNPRNLYDAV 101
>pdb|3BE8|A Chain A, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|3BE8|B Chain B, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|2WQZ|A Chain A, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2WQZ|B Chain B, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2XB6|A Chain A, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
pdb|2XB6|B Chain B, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
Length = 588
Score = 29.3 bits (64), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 46 WVRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATKIYHDLCSDIAARVPAVIVSVDY 105
++ I++P + +K P++VY+HGG+ + T D S +A+ ++++++Y
Sbjct: 117 YLNIYVPTEDDIHDQNSKKPVMVYIHGGSYM---EGTGNMID-GSILASYGNVIVITINY 172
Query: 106 RLA 108
RL
Sbjct: 173 RLG 175
>pdb|3B3Q|A Chain A, Crystal Structure Of A Synaptic Adhesion Complex
pdb|3B3Q|B Chain B, Crystal Structure Of A Synaptic Adhesion Complex
Length = 577
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 33 VSKDVPVNQSNKTWVRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATKIYHDLCSDI 92
VS V + ++ I++P + + P++VY+HGG+ + +Y S +
Sbjct: 113 VSSYVQDQSEDCLYLNIYVPTEDDIRDSGGPKPVMVYIHGGS--YMEGTGNLYDG--SVL 168
Query: 93 AARVPAVIVSVDYRLA 108
A+ ++++V+YRL
Sbjct: 169 ASYGNVIVITVNYRLG 184
>pdb|3BIW|A Chain A, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|B Chain B, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|C Chain C, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|D Chain D, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIX|A Chain A, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|B Chain B, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|C Chain C, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|D Chain D, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
Length = 574
Score = 28.9 bits (63), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 33 VSKDVPVNQSNKTWVRIFLPRQALDSSTKTKLPLIVYVHGGALILLSAATKIYHDLCSDI 92
VS V + ++ I++P + + P++VY+HGG+ + +Y S +
Sbjct: 100 VSSYVQDQSEDCLYLNIYVPTEDDIRDSGGPKPVMVYIHGGS--YMEGTGNLYDG--SVL 155
Query: 93 AARVPAVIVSVDYRLA 108
A+ ++++V+YRL
Sbjct: 156 ASYGNVIVITVNYRLG 171
>pdb|2OGT|A Chain A, Crystal Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est55 At Ph 6.8
Length = 498
Score = 28.9 bits (63), Expect = 0.75, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 63 KLPLIVYVHGGALILLSAATKIYHDLCSDIAARVPAVIVSVDYRL 107
K P++ ++HGGA + S ++ Y + A V+V+++YR+
Sbjct: 98 KRPVLFWIHGGAFLFGSGSSPWYDG--TAFAKHGDVVVVTINYRM 140
>pdb|2OGS|A Chain A, Crystal Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est55 At Ph 6.2
Length = 498
Score = 28.9 bits (63), Expect = 0.76, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 63 KLPLIVYVHGGALILLSAATKIYHDLCSDIAARVPAVIVSVDYRL 107
K P++ ++HGGA + S ++ Y + A V+V+++YR+
Sbjct: 98 KRPVLFWIHGGAFLFGSGSSPWYDG--TAFAKHGDVVVVTINYRM 140
>pdb|3VKF|A Chain A, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX
pdb|3VKF|B Chain B, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX
Length = 585
Score = 27.3 bits (59), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 65 PLIVYVHGGALILLSAATKIYHDLCSDIAARVPAVIVSVDYRLA 108
P++VY+HGG+ + +Y S +A+ ++++V+YRL
Sbjct: 150 PVMVYIHGGS--YMEGTGNLYDG--SVLASYGNVIVITVNYRLG 189
>pdb|3H04|A Chain A, The Crystal Structure Of The Protein With Unknown Function
From Staphylococcus Aureus Subsp. Aureus Mu50
Length = 275
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 51 LPRQALDSSTKTKLPLIVYVHGGALILLSA--ATKIYHDLCSDIAARVPAVIVSVDYRLA 108
LP + + + +IVY+HGG L+ A + Y D+ ++ ++ + YRL
Sbjct: 16 LPYTIIKAKNQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEHYD-----LIQLSYRLL 70
Query: 109 PE 110
PE
Sbjct: 71 PE 72
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.133 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,678,562
Number of Sequences: 62578
Number of extensions: 121441
Number of successful extensions: 348
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 299
Number of HSP's gapped (non-prelim): 53
length of query: 122
length of database: 14,973,337
effective HSP length: 84
effective length of query: 38
effective length of database: 9,716,785
effective search space: 369237830
effective search space used: 369237830
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)