Query 042987
Match_columns 481
No_of_seqs 156 out of 1477
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 20:31:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042987.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042987hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 2.4E-71 8.1E-76 551.1 41.6 437 3-473 14-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 4.3E-66 1.5E-70 522.2 47.7 454 3-474 7-469 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 2.6E-63 8.7E-68 503.7 39.1 439 3-474 9-479 (482)
4 2acv_A Triterpene UDP-glucosyl 100.0 1.4E-62 4.8E-67 494.7 42.3 437 3-473 10-462 (463)
5 2c1x_A UDP-glucose flavonoid 3 100.0 2E-62 6.9E-67 492.2 41.4 438 3-474 8-452 (456)
6 2iya_A OLEI, oleandomycin glyc 100.0 1E-42 3.4E-47 348.5 36.4 390 3-474 13-422 (424)
7 4amg_A Snogd; transferase, pol 100.0 7.2E-43 2.5E-47 346.9 29.4 357 3-469 23-396 (400)
8 1iir_A Glycosyltransferase GTF 100.0 2.1E-41 7.2E-46 337.8 30.3 365 4-452 2-383 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 1.2E-40 4.2E-45 332.4 28.3 376 4-473 2-400 (416)
10 3h4t_A Glycosyltransferase GTF 100.0 1.6E-40 5.3E-45 330.0 23.8 363 4-473 2-382 (404)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 8.8E-38 3E-42 311.8 33.8 375 3-473 21-413 (415)
12 3ia7_A CALG4; glycosysltransfe 100.0 9.8E-37 3.4E-41 302.8 35.3 381 1-474 2-399 (402)
13 2yjn_A ERYCIII, glycosyltransf 100.0 4.1E-37 1.4E-41 309.2 30.2 375 3-473 21-435 (441)
14 2p6p_A Glycosyl transferase; X 100.0 1.6E-36 5.4E-41 299.5 33.0 358 4-476 2-382 (384)
15 2iyf_A OLED, oleandomycin glyc 100.0 4.6E-36 1.6E-40 300.8 27.8 374 3-471 8-397 (430)
16 3oti_A CALG3; calicheamicin, T 100.0 1.2E-34 4.2E-39 287.4 22.9 351 2-470 20-394 (398)
17 4fzr_A SSFS6; structural genom 100.0 1.9E-34 6.5E-39 286.0 20.7 343 3-452 16-383 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 6.6E-33 2.3E-37 274.3 26.1 356 3-471 2-386 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 6.2E-30 2.1E-34 254.7 31.2 363 3-473 21-408 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 4.9E-30 1.7E-34 250.4 24.8 325 1-447 1-338 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 7.7E-27 2.6E-31 202.6 16.2 163 262-452 6-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 2.8E-19 9.7E-24 174.5 26.6 338 3-475 7-357 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.6 2.1E-15 7.2E-20 133.9 10.3 140 275-431 26-196 (224)
24 3hbm_A UDP-sugar hydrolase; PS 99.5 7.1E-13 2.4E-17 122.7 20.8 117 277-412 157-275 (282)
25 3ot5_A UDP-N-acetylglucosamine 99.3 1.5E-11 5.1E-16 121.0 15.7 348 3-473 28-393 (403)
26 3c48_A Predicted glycosyltrans 99.3 2.2E-09 7.6E-14 106.8 30.2 356 3-450 21-408 (438)
27 1v4v_A UDP-N-acetylglucosamine 99.3 1.1E-10 3.6E-15 114.0 19.4 130 277-436 198-336 (376)
28 3okp_A GDP-mannose-dependent a 99.3 1.2E-09 4.2E-14 106.9 25.8 350 3-477 5-381 (394)
29 1vgv_A UDP-N-acetylglucosamine 99.3 5.5E-11 1.9E-15 116.4 15.8 132 276-436 204-344 (384)
30 3dzc_A UDP-N-acetylglucosamine 99.2 1.3E-10 4.4E-15 114.1 15.1 323 3-436 26-369 (396)
31 3fro_A GLGA glycogen synthase; 99.2 4.4E-08 1.5E-12 97.2 32.6 391 2-475 2-430 (439)
32 2jjm_A Glycosyl transferase, g 99.2 1.1E-07 3.8E-12 93.1 32.7 355 1-475 14-385 (394)
33 2gek_A Phosphatidylinositol ma 99.1 9.1E-08 3.1E-12 94.0 29.0 93 341-447 262-363 (406)
34 2r60_A Glycosyl transferase, g 99.1 2.7E-08 9.3E-13 100.8 24.8 95 341-449 334-440 (499)
35 2iw1_A Lipopolysaccharide core 99.1 2E-08 6.8E-13 97.5 22.7 144 279-449 197-353 (374)
36 4hwg_A UDP-N-acetylglucosamine 99.0 1.8E-09 6.1E-14 105.2 13.0 349 5-475 12-377 (385)
37 3beo_A UDP-N-acetylglucosamine 99.0 6E-09 2E-13 101.4 14.9 79 342-436 263-344 (375)
38 2iuy_A Avigt4, glycosyltransfe 98.9 1.2E-07 4.1E-12 91.0 22.3 125 280-433 164-307 (342)
39 2x6q_A Trehalose-synthase TRET 98.8 3.8E-06 1.3E-10 82.7 28.6 111 341-474 292-413 (416)
40 3s28_A Sucrose synthase 1; gly 98.7 1E-06 3.4E-11 93.2 22.8 93 342-448 640-749 (816)
41 2vsy_A XCC0866; transferase, g 98.4 0.0011 3.7E-08 67.9 33.5 94 342-446 434-535 (568)
42 2f9f_A First mannosyl transfer 98.4 2.6E-06 8.9E-11 73.2 11.6 141 279-448 24-174 (177)
43 1rzu_A Glycogen synthase 1; gl 98.3 3.9E-05 1.3E-09 77.1 20.1 134 279-436 292-445 (485)
44 2qzs_A Glycogen synthase; glyc 98.2 8.9E-05 3E-09 74.5 20.9 81 342-436 347-446 (485)
45 2xci_A KDO-transferase, 3-deox 97.9 0.0017 5.7E-08 62.8 21.8 97 343-452 261-364 (374)
46 2hy7_A Glucuronosyltransferase 97.8 0.006 2.1E-07 59.5 23.0 76 341-436 264-354 (406)
47 2bfw_A GLGA glycogen synthase; 97.6 0.0011 3.7E-08 57.6 14.2 91 343-448 96-196 (200)
48 3qhp_A Type 1 capsular polysac 97.6 0.00057 1.9E-08 57.4 11.8 139 279-449 3-156 (166)
49 3q3e_A HMW1C-like glycosyltran 97.6 0.00089 3E-08 67.7 13.9 141 278-436 441-590 (631)
50 4gyw_A UDP-N-acetylglucosamine 97.5 0.0025 8.7E-08 67.0 16.9 142 276-436 521-670 (723)
51 3oy2_A Glycosyltransferase B73 97.4 0.0034 1.2E-07 61.3 16.2 77 344-436 256-357 (413)
52 3tov_A Glycosyl transferase fa 97.2 0.028 9.5E-07 53.5 19.1 106 3-141 9-116 (349)
53 1psw_A ADP-heptose LPS heptosy 96.9 0.062 2.1E-06 50.9 18.4 38 4-41 2-39 (348)
54 3rhz_A GTF3, nucleotide sugar 96.8 0.003 1E-07 59.9 8.1 95 343-452 215-321 (339)
55 2x0d_A WSAF; GT4 family, trans 94.1 0.1 3.4E-06 50.9 7.5 80 342-436 295-381 (413)
56 3vue_A GBSS-I, granule-bound s 93.4 1 3.5E-05 45.3 13.7 138 279-433 328-476 (536)
57 3t5t_A Putative glycosyltransf 89.6 2.7 9.2E-05 41.6 11.5 110 343-475 353-473 (496)
58 1uqt_A Alpha, alpha-trehalose- 86.5 5.2 0.00018 39.5 11.6 107 346-475 336-454 (482)
59 2wqk_A 5'-nucleotidase SURE; S 80.7 5.7 0.0002 35.3 8.1 39 2-44 1-39 (251)
60 3nb0_A Glycogen [starch] synth 79.3 3.9 0.00013 41.9 7.3 36 353-390 513-552 (725)
61 2gt1_A Lipopolysaccharide hept 78.4 2.2 7.5E-05 39.6 5.0 38 4-41 2-39 (326)
62 2iz6_A Molybdenum cofactor car 77.9 27 0.00092 29.0 10.9 43 346-389 93-140 (176)
63 3dfz_A SIRC, precorrin-2 dehyd 77.5 2.7 9.3E-05 36.6 4.9 152 270-454 26-186 (223)
64 3vue_A GBSS-I, granule-bound s 70.2 2.3 8E-05 42.7 3.0 38 3-42 10-53 (536)
65 2phj_A 5'-nucleotidase SURE; S 69.7 20 0.00067 31.7 8.5 39 3-45 2-40 (251)
66 3qjg_A Epidermin biosynthesis 68.5 5.6 0.00019 33.1 4.5 41 1-44 4-44 (175)
67 1o4v_A Phosphoribosylaminoimid 65.2 58 0.002 27.0 11.8 141 279-457 15-165 (183)
68 1xmp_A PURE, phosphoribosylami 63.6 60 0.002 26.5 12.0 145 279-457 13-165 (170)
69 3rg8_A Phosphoribosylaminoimid 63.2 59 0.002 26.3 11.0 138 279-454 4-149 (159)
70 1g5t_A COB(I)alamin adenosyltr 61.1 56 0.0019 27.5 9.4 102 4-124 30-131 (196)
71 3iqw_A Tail-anchored protein t 61.0 11 0.00037 35.1 5.5 36 4-41 17-53 (334)
72 2x0d_A WSAF; GT4 family, trans 58.9 4.8 0.00016 38.8 2.7 38 3-42 47-89 (413)
73 2i2c_A Probable inorganic poly 58.6 7.7 0.00026 34.9 3.9 28 359-388 36-69 (272)
74 1g63_A Epidermin modifying enz 58.5 6.5 0.00022 33.0 3.1 42 1-45 1-42 (181)
75 1ccw_A Protein (glutamate muta 58.2 14 0.00049 29.1 5.0 39 1-41 1-40 (137)
76 3hyw_A Sulfide-quinone reducta 56.1 7.1 0.00024 37.8 3.5 37 1-42 1-37 (430)
77 4gmf_A Yersiniabactin biosynth 51.9 61 0.0021 30.5 9.1 65 349-413 57-128 (372)
78 2ejb_A Probable aromatic acid 50.4 27 0.00093 29.3 5.7 37 2-41 1-37 (189)
79 1pjq_A CYSG, siroheme synthase 49.0 32 0.0011 33.5 6.8 148 277-454 13-168 (457)
80 4dzz_A Plasmid partitioning pr 48.9 78 0.0027 26.2 8.7 35 5-41 4-39 (206)
81 2vqe_B 30S ribosomal protein S 48.9 11 0.00038 33.4 3.1 34 112-146 157-192 (256)
82 1u11_A PURE (N5-carboxyaminoim 48.6 1E+02 0.0034 25.5 8.5 144 279-457 23-175 (182)
83 3vot_A L-amino acid ligase, BL 48.5 96 0.0033 29.5 10.2 32 3-41 6-37 (425)
84 3zqu_A Probable aromatic acid 48.5 24 0.00082 30.2 5.1 37 2-41 4-40 (209)
85 1kyq_A Met8P, siroheme biosynt 47.8 1.3E+02 0.0044 26.9 10.1 36 420-455 173-211 (274)
86 2pju_A Propionate catabolism o 47.3 29 0.00099 30.1 5.5 29 359-390 64-92 (225)
87 3s2u_A UDP-N-acetylglucosamine 45.9 38 0.0013 31.7 6.7 27 358-386 92-121 (365)
88 3e18_A Oxidoreductase; dehydro 45.1 1.8E+02 0.0062 26.8 11.3 109 279-412 8-124 (359)
89 2ywx_A Phosphoribosylaminoimid 44.0 1.3E+02 0.0043 24.3 10.6 134 281-454 3-144 (157)
90 2q5c_A NTRC family transcripti 43.5 23 0.00078 30.0 4.2 27 363-390 54-80 (196)
91 2h31_A Multifunctional protein 43.5 1.5E+02 0.005 28.4 10.1 138 278-454 266-412 (425)
92 2yxb_A Coenzyme B12-dependent 43.3 23 0.00078 28.9 4.1 37 3-41 19-55 (161)
93 1y80_A Predicted cobalamin bin 43.0 29 0.00099 29.6 4.9 37 3-41 89-125 (210)
94 3lrx_A Putative hydrogenase; a 42.8 19 0.00064 29.2 3.4 49 3-57 24-72 (158)
95 1p3y_1 MRSD protein; flavoprot 42.1 1.5E+02 0.0052 24.8 10.3 139 279-435 11-187 (194)
96 3e9m_A Oxidoreductase, GFO/IDH 40.2 1.8E+02 0.0062 26.4 10.4 112 279-413 8-127 (330)
97 2i2x_B MTAC, methyltransferase 40.1 35 0.0012 30.2 5.1 38 3-42 124-161 (258)
98 2gt1_A Lipopolysaccharide hept 40.1 22 0.00074 32.6 3.9 135 277-435 178-323 (326)
99 2ywr_A Phosphoribosylglycinami 40.0 1.7E+02 0.006 24.8 11.5 107 2-143 1-110 (216)
100 3io3_A DEHA2D07832P; chaperone 38.7 71 0.0024 29.7 7.2 36 4-41 19-57 (348)
101 3m2t_A Probable dehydrogenase; 38.3 1.8E+02 0.006 26.9 10.0 111 279-411 8-126 (359)
102 2r85_A PURP protein PF1517; AT 38.0 26 0.00089 32.1 4.1 33 1-41 1-33 (334)
103 1fy2_A Aspartyl dipeptidase; s 37.6 89 0.0031 26.9 7.3 46 264-311 21-66 (229)
104 3ahc_A Phosphoketolase, xylulo 37.3 2.5E+02 0.0084 29.6 11.4 82 364-460 727-813 (845)
105 3l4e_A Uncharacterized peptida 37.2 86 0.0029 26.6 6.9 46 267-312 18-63 (206)
106 3igf_A ALL4481 protein; two-do 37.0 70 0.0024 30.1 6.9 37 2-40 1-38 (374)
107 1jx7_A Hypothetical protein YC 36.3 38 0.0013 25.3 4.2 39 1-41 1-43 (117)
108 3i83_A 2-dehydropantoate 2-red 36.3 26 0.00089 32.1 3.8 34 1-41 1-34 (320)
109 4grd_A N5-CAIR mutase, phospho 36.0 1.8E+02 0.0061 23.8 11.7 144 278-456 13-165 (173)
110 3lqk_A Dipicolinate synthase s 36.0 42 0.0014 28.5 4.7 39 3-44 8-47 (201)
111 3hn2_A 2-dehydropantoate 2-red 35.9 26 0.00089 32.0 3.7 34 1-41 1-34 (312)
112 1ydh_A AT5G11950; structural g 35.8 2.1E+02 0.007 24.4 10.9 44 344-388 89-143 (216)
113 1id1_A Putative potassium chan 35.5 20 0.00069 28.6 2.6 31 3-40 4-34 (153)
114 3u7q_B Nitrogenase molybdenum- 35.3 1.8E+02 0.0063 28.7 9.9 32 3-41 365-396 (523)
115 3ug7_A Arsenical pump-driving 35.0 69 0.0024 29.7 6.5 37 4-42 27-64 (349)
116 3fwz_A Inner membrane protein 34.7 16 0.00056 28.7 1.8 33 1-40 6-38 (140)
117 3afo_A NADH kinase POS5; alpha 34.7 35 0.0012 32.4 4.3 35 352-388 108-147 (388)
118 3tsa_A SPNG, NDP-rhamnosyltran 34.6 62 0.0021 30.2 6.3 29 358-388 114-143 (391)
119 1iow_A DD-ligase, DDLB, D-ALA\ 34.5 63 0.0022 28.9 6.1 39 1-41 1-43 (306)
120 3u3x_A Oxidoreductase; structu 34.5 2.8E+02 0.0094 25.6 10.7 111 279-411 29-146 (361)
121 4b4k_A N5-carboxyaminoimidazol 34.4 1.9E+02 0.0067 23.8 13.4 144 278-457 23-176 (181)
122 3ors_A N5-carboxyaminoimidazol 34.1 1.9E+02 0.0064 23.5 11.4 141 279-455 5-155 (163)
123 1vi6_A 30S ribosomal protein S 33.8 20 0.00067 30.6 2.2 33 113-146 115-149 (208)
124 1sbz_A Probable aromatic acid 33.6 52 0.0018 27.8 4.8 35 4-41 2-37 (197)
125 3ezx_A MMCP 1, monomethylamine 33.4 57 0.002 27.9 5.2 39 3-43 93-131 (215)
126 3kuu_A Phosphoribosylaminoimid 33.4 2E+02 0.0068 23.6 11.5 145 279-457 14-166 (174)
127 3sju_A Keto reductase; short-c 33.4 1.3E+02 0.0045 26.6 8.0 31 4-39 25-55 (279)
128 1yt5_A Inorganic polyphosphate 33.2 21 0.00073 31.6 2.5 54 358-435 41-97 (258)
129 1qgu_B Protein (nitrogenase mo 32.7 2.3E+02 0.0078 27.9 10.1 34 100-141 425-465 (519)
130 3sbx_A Putative uncharacterize 32.7 2.2E+02 0.0074 23.7 9.3 42 346-388 94-146 (189)
131 3bch_A 40S ribosomal protein S 32.5 20 0.0007 31.5 2.1 33 113-146 151-185 (253)
132 3lyu_A Putative hydrogenase; t 32.4 30 0.001 27.3 3.1 49 3-57 19-67 (142)
133 2ab0_A YAJL; DJ-1/THIJ superfa 32.2 78 0.0027 26.6 5.9 38 1-41 1-38 (205)
134 4b4o_A Epimerase family protei 31.5 38 0.0013 30.4 4.0 31 4-40 2-32 (298)
135 3ius_A Uncharacterized conserv 31.3 42 0.0014 29.7 4.3 33 1-40 4-36 (286)
136 4e08_A DJ-1 beta; flavodoxin-l 31.3 89 0.0031 25.8 6.1 39 1-42 4-42 (190)
137 3bbn_B Ribosomal protein S2; s 31.3 15 0.00052 31.9 1.1 33 113-146 157-191 (231)
138 3l7i_A Teichoic acid biosynthe 31.3 55 0.0019 34.0 5.7 115 346-473 603-719 (729)
139 1qkk_A DCTD, C4-dicarboxylate 31.2 1.7E+02 0.0057 22.6 7.6 50 378-435 73-122 (155)
140 3s40_A Diacylglycerol kinase; 30.7 75 0.0026 28.8 5.9 26 364-389 67-98 (304)
141 1z82_A Glycerol-3-phosphate de 30.7 32 0.0011 31.7 3.4 32 1-39 13-44 (335)
142 2an1_A Putative kinase; struct 30.5 27 0.00091 31.6 2.7 32 355-388 60-95 (292)
143 1u0t_A Inorganic polyphosphate 30.1 24 0.00082 32.3 2.4 32 355-388 72-107 (307)
144 3mc3_A DSRE/DSRF-like family p 30.1 64 0.0022 25.1 4.6 36 4-41 17-55 (134)
145 3ia7_A CALG4; glycosysltransfe 30.1 1E+02 0.0035 28.6 7.1 34 279-314 7-40 (402)
146 1t35_A Hypothetical protein YV 29.7 1.5E+02 0.0051 24.7 7.1 42 346-388 83-135 (191)
147 2qk4_A Trifunctional purine bi 29.6 3E+02 0.01 26.3 10.4 34 1-41 23-57 (452)
148 2xzm_B RPS0E; ribosome, transl 29.4 21 0.00072 31.2 1.7 33 113-146 114-148 (241)
149 2qv7_A Diacylglycerol kinase D 29.1 1.2E+02 0.0043 27.7 7.2 29 359-389 81-115 (337)
150 3ego_A Probable 2-dehydropanto 29.0 31 0.0011 31.5 2.9 32 1-40 1-32 (307)
151 3to5_A CHEY homolog; alpha(5)b 28.9 88 0.003 24.3 5.2 42 99-145 47-97 (134)
152 3tov_A Glycosyl transferase fa 28.5 1.1E+02 0.0037 28.3 6.6 29 113-144 261-289 (349)
153 3db2_A Putative NADPH-dependen 28.5 3E+02 0.01 25.1 9.9 111 279-413 8-126 (354)
154 2zkq_b 40S ribosomal protein S 28.4 24 0.00082 31.8 1.9 33 113-146 118-152 (295)
155 2a33_A Hypothetical protein; s 28.1 1.8E+02 0.006 24.9 7.3 43 346-388 95-147 (215)
156 3pdi_B Nitrogenase MOFE cofact 27.9 59 0.002 31.6 4.8 34 100-141 366-399 (458)
157 4eg0_A D-alanine--D-alanine li 27.9 73 0.0025 28.9 5.3 37 1-39 12-52 (317)
158 4gbj_A 6-phosphogluconate dehy 27.7 50 0.0017 29.9 4.1 32 1-39 4-35 (297)
159 3mcu_A Dipicolinate synthase, 27.5 50 0.0017 28.1 3.7 38 3-43 6-44 (207)
160 3u5c_A 40S ribosomal protein S 27.4 30 0.001 30.4 2.3 33 113-146 117-151 (252)
161 1o97_C Electron transferring f 27.3 71 0.0024 28.4 4.9 41 99-144 102-148 (264)
162 3v8b_A Putative dehydrogenase, 27.1 2.2E+02 0.0075 25.1 8.3 31 4-39 29-59 (283)
163 1f9y_A HPPK, protein (6-hydrox 27.0 71 0.0024 25.8 4.3 28 279-306 2-29 (158)
164 2qx0_A 7,8-dihydro-6-hydroxyme 26.9 93 0.0032 25.2 5.0 28 279-306 3-30 (159)
165 4fzr_A SSFS6; structural genom 26.9 1.1E+02 0.0038 28.5 6.6 35 279-315 18-52 (398)
166 2d1p_B TUSC, hypothetical UPF0 26.9 97 0.0033 23.4 5.0 39 1-41 1-41 (119)
167 2lpm_A Two-component response 26.7 47 0.0016 25.5 3.1 29 112-141 52-85 (123)
168 3irs_A Uncharacterized protein 26.7 58 0.002 29.3 4.3 133 291-448 136-278 (291)
169 3ip0_A 2-amino-4-hydroxy-6-hyd 26.4 74 0.0025 25.7 4.3 28 279-306 2-29 (158)
170 3j20_B 30S ribosomal protein S 26.3 25 0.00086 29.8 1.6 33 113-146 111-145 (202)
171 1v5e_A Pyruvate oxidase; oxido 26.3 1.4E+02 0.0046 30.1 7.4 78 295-387 7-101 (590)
172 2bon_A Lipid kinase; DAG kinas 26.2 1.9E+02 0.0066 26.4 7.9 30 358-389 82-119 (332)
173 1qzu_A Hypothetical protein MD 25.9 57 0.0019 27.8 3.8 39 3-44 20-59 (206)
174 3rih_A Short chain dehydrogena 25.9 3.5E+02 0.012 24.0 9.9 31 4-39 42-72 (293)
175 3euw_A MYO-inositol dehydrogen 25.9 3.7E+02 0.013 24.3 11.2 110 279-412 7-124 (344)
176 3q2i_A Dehydrogenase; rossmann 25.8 3.8E+02 0.013 24.4 11.6 112 278-413 15-135 (354)
177 3r1i_A Short-chain type dehydr 25.4 3.4E+02 0.012 23.7 9.6 32 4-40 33-64 (276)
178 2xws_A Sirohydrochlorin cobalt 25.3 85 0.0029 24.1 4.6 41 1-41 2-44 (133)
179 1tjn_A Sirohydrochlorin cobalt 25.0 2.3E+02 0.0078 22.5 7.2 107 271-403 17-143 (156)
180 3kcn_A Adenylate cyclase homol 24.7 1.8E+02 0.0063 22.2 6.7 49 378-435 74-124 (151)
181 1ooe_A Dihydropteridine reduct 24.7 90 0.0031 26.7 5.1 35 1-40 1-35 (236)
182 1u9c_A APC35852; structural ge 24.3 1.4E+02 0.0048 25.3 6.2 40 1-42 4-52 (224)
183 2q5c_A NTRC family transcripti 24.2 1E+02 0.0034 25.9 5.0 45 98-147 128-172 (196)
184 3iz6_A 40S ribosomal protein S 24.1 40 0.0014 30.4 2.5 34 113-147 122-157 (305)
185 3qbc_A 2-amino-4-hydroxy-6-hyd 24.0 87 0.003 25.4 4.3 28 279-306 6-33 (161)
186 1wek_A Hypothetical protein TT 23.9 1.6E+02 0.0053 25.2 6.2 42 347-388 118-170 (217)
187 2qs7_A Uncharacterized protein 23.8 88 0.003 24.7 4.4 36 4-41 10-45 (144)
188 3h4t_A Glycosyltransferase GTF 23.8 1.4E+02 0.0047 28.1 6.6 35 279-315 3-37 (404)
189 4hkt_A Inositol 2-dehydrogenas 23.5 4.1E+02 0.014 23.9 10.9 110 279-413 6-123 (331)
190 3tqq_A Methionyl-tRNA formyltr 23.4 76 0.0026 29.0 4.4 37 1-44 1-37 (314)
191 2l82_A Designed protein OR32; 23.0 1.6E+02 0.0055 21.7 5.1 34 279-316 3-36 (162)
192 1efv_B Electron transfer flavo 22.9 1E+02 0.0034 27.2 5.0 40 99-143 106-151 (255)
193 1cbk_A Protein (7,8-dihydro-6- 22.9 92 0.0032 25.2 4.3 28 279-306 3-30 (160)
194 4dik_A Flavoprotein; TM0755, e 22.7 48 0.0016 31.7 3.0 65 243-311 233-299 (410)
195 1ybh_A Acetolactate synthase, 22.5 1.5E+02 0.005 29.8 6.8 26 362-387 77-108 (590)
196 1q1v_A DEK protein; winged-hel 22.5 1.8E+02 0.0062 19.7 5.1 54 418-473 11-66 (70)
197 2x5n_A SPRPN10, 26S proteasome 22.5 2.5E+02 0.0085 23.2 7.2 64 5-72 110-173 (192)
198 1t9b_A Acetolactate synthase, 22.4 3E+02 0.01 28.1 9.2 78 294-387 84-178 (677)
199 3r8n_B 30S ribosomal protein S 22.4 17 0.0006 31.3 -0.2 34 112-146 148-183 (218)
200 2w36_A Endonuclease V; hypoxan 22.3 1.3E+02 0.0043 26.0 5.2 40 101-143 93-139 (225)
201 1g3q_A MIND ATPase, cell divis 22.1 84 0.0029 26.8 4.4 39 1-41 1-40 (237)
202 1efp_B ETF, protein (electron 22.1 94 0.0032 27.3 4.6 39 100-143 104-148 (252)
203 3h7a_A Short chain dehydrogena 22.0 1.4E+02 0.0049 25.8 5.9 33 3-40 7-39 (252)
204 2r8r_A Sensor protein; KDPD, P 21.9 1.3E+02 0.0044 26.0 5.3 38 3-42 7-44 (228)
205 2r6j_A Eugenol synthase 1; phe 21.9 77 0.0026 28.6 4.2 32 4-41 13-44 (318)
206 1p3y_1 MRSD protein; flavoprot 21.8 75 0.0026 26.7 3.7 37 3-42 9-45 (194)
207 3rc1_A Sugar 3-ketoreductase; 21.7 3.7E+02 0.013 24.5 9.1 111 279-412 30-148 (350)
208 3l3b_A ES1 family protein; ssg 21.6 1.6E+02 0.0054 25.6 6.0 38 1-41 22-64 (242)
209 3qua_A Putative uncharacterize 21.5 1.6E+02 0.0056 24.7 5.8 43 345-388 102-155 (199)
210 1qfj_A Protein (flavin reducta 21.2 72 0.0025 27.3 3.7 63 4-69 104-166 (232)
211 1kjn_A MTH0777; hypotethical p 20.9 95 0.0033 24.7 3.8 28 12-41 18-45 (157)
212 1ozh_A ALS, acetolactate synth 20.9 1.8E+02 0.0063 28.9 7.1 26 362-387 75-106 (566)
213 3u7q_A Nitrogenase molybdenum- 20.8 84 0.0029 30.9 4.4 34 100-141 408-441 (492)
214 3rsc_A CALG2; TDP, enediyne, s 20.8 1.9E+02 0.0064 27.0 6.9 35 279-315 23-57 (415)
215 3qrx_B Melittin; calcium-bindi 20.8 19 0.00066 18.6 -0.1 17 369-385 1-17 (26)
216 3l6e_A Oxidoreductase, short-c 20.6 97 0.0033 26.6 4.4 34 1-39 1-34 (235)
217 3f6r_A Flavodoxin; FMN binding 20.6 1.1E+02 0.0038 23.8 4.4 38 2-41 1-39 (148)
218 2hy5_B Intracellular sulfur ox 20.6 1.5E+02 0.005 23.1 5.0 39 1-41 5-45 (136)
219 4e5s_A MCCFLIKE protein (BA_56 20.6 1.7E+02 0.0059 26.8 6.3 73 290-388 62-136 (331)
220 1eiw_A Hypothetical protein MT 20.5 91 0.0031 23.5 3.6 65 356-433 36-109 (111)
221 2lnd_A De novo designed protei 20.4 1.9E+02 0.0064 20.0 4.7 49 379-433 50-100 (112)
222 2etv_A Iron(III) ABC transport 20.2 77 0.0026 29.3 3.9 37 100-142 88-125 (346)
223 1o4v_A Phosphoribosylaminoimid 20.2 1.3E+02 0.0046 24.8 4.7 104 289-432 51-156 (183)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=2.4e-71 Score=551.07 Aligned_cols=437 Identities=24% Similarity=0.407 Sum_probs=356.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCCCCCCCCCCCC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPPVSGLPDTLRS 82 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~l~~~~~~ 82 (481)
.||+++|+|++||++|++.||+.|+++|+.+.|||+++...... .........++++|+.+++. +|.+.+.
T Consensus 14 ~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~------~~~~~~~~~~~i~~~~ipdg---lp~~~~~ 84 (454)
T 3hbf_A 14 LHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDT------LFSRSNEFLPNIKYYNVHDG---LPKGYVS 84 (454)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHH------SCSSSSCCCTTEEEEECCCC---CCTTCCC
T ss_pred CEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHh------hhcccccCCCCceEEecCCC---CCCCccc
Confidence 59999999999999999999999999998899999986422111 00110011358999999854 7766555
Q ss_pred CCCchHHHHHHHHhhhHHHHHHHHHhhc--cCCccEEEECCCCcchHHhhhhhcCCceEEEeccchhhHhhHhhhccccc
Q 042987 83 PADFPALVYELGELNNPKLHETLITISK--RSNLKAFVIDFFCNPAFQVSSSTLSIPTYYYFTTAGSVLAANLYLPTLHK 160 (481)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~--~~~pD~VI~D~~~~~~~~~A~~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 160 (481)
..+....+..+.+.....+++.++++.+ ..++||||+|.+++|+..+| +++|||++.||+++++.++.+.+.+.+..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA-~~lgIP~~~f~t~~a~~~~~~~~~~~~~~ 163 (454)
T 3hbf_A 85 SGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLA-EEMHAKWVPLWTAGPHSLLTHVYTDLIRE 163 (454)
T ss_dssp CSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHH-HHTTCEEEEEECSCHHHHHHHHTHHHHHH
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHH-HHhCCCEEEEeCccHHHHHHHHhhHHHHh
Confidence 4444444555555556667777776542 25799999999999999999 99999999999999999988888776554
Q ss_pred ccCccccccCcccccCCCCCCCCcccCCCccc-CCCchHHHHHHHHHhhhcccceEEEcCchhhhHHHHHHHHcccCCCC
Q 042987 161 NTTKSFRELGSTLLNFPGFPPFPARDMALPMH-DREGKVYKGLVDTGIQMAKSAGVIVNTFELLEERAIKAMLEGQCTPG 239 (481)
Q Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~ 239 (481)
...............+||+++++.++++..+. .....+.+.+.+..+...+.+++++||+++||++++..+.+..
T Consensus 164 ~~~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~---- 239 (454)
T 3hbf_A 164 KTGSKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF---- 239 (454)
T ss_dssp TCCHHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS----
T ss_pred hcCCCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC----
Confidence 32111111112223489999999999998876 3345566777777888889999999999999999988887664
Q ss_pred CCCCCeEEeCcccCCCCCCCCCCCcchhhhhhcCCCCCcEEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeCCCCC
Q 042987 240 ETSPPLYCIGPVVGRGNGENRGRDRHECLSWLDSKPSRSVLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRAPAPD 319 (481)
Q Consensus 240 ~~~~~v~~vGpl~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 319 (481)
|++++|||++...+... ...+++|.+||+.++++++|||||||+...+.+++.+++.+|++.+++|||+++..
T Consensus 240 ---~~v~~vGPl~~~~~~~~-~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~--- 312 (454)
T 3hbf_A 240 ---KLLLNVGPFNLTTPQRK-VSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGD--- 312 (454)
T ss_dssp ---SCEEECCCHHHHSCCSC-CCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC---
T ss_pred ---CCEEEECCccccccccc-ccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc---
Confidence 89999999986443211 13457899999999889999999999998899999999999999999999999864
Q ss_pred CccccccccccCchhhHhhhcCCCeEeecccchhhhhcccCcceeeeccCchhHHHhHhcCCcEEecccccchhHHHHHH
Q 042987 320 SIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNHESVGGFVTHCGWNSVLEGVCAGVPMLAWPLYAEQKMIRAVV 399 (481)
Q Consensus 320 ~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~~~~~~~I~HgG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v 399 (481)
....+|++|.++.. +|+.+.+|+||.++|+|+++++|||||||||++||+++|||||++|+++||+.||+++
T Consensus 313 -------~~~~lp~~~~~~~~-~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v 384 (454)
T 3hbf_A 313 -------PKEKLPKGFLERTK-TKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILT 384 (454)
T ss_dssp -------HHHHSCTTHHHHTT-TTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH
T ss_pred -------chhcCCHhHHhhcC-CceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHH
Confidence 23458888887765 4666679999999999999999999999999999999999999999999999999999
Q ss_pred HHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 042987 400 VEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEKGRAVKERAVAMKEAAAAAMRDGGSSRVALDNLVESFK 473 (481)
Q Consensus 400 ~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 473 (481)
++.+|+|+.+.... +++++|.++|+++|+|+++++||+||+++++++++++++|||++.++++|++++.
T Consensus 385 ~~~~g~Gv~l~~~~-----~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 385 ESVLEIGVGVDNGV-----LTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp HTTSCSEEECGGGS-----CCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred HHhhCeeEEecCCC-----CCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 75589999998777 9999999999999998767789999999999999999999999999999999885
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=4.3e-66 Score=522.18 Aligned_cols=454 Identities=37% Similarity=0.665 Sum_probs=347.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC-CCCeEEEEEeCCCCCCCCCCcchhhhhccCC-CCCeeEEEcCCCCCCCCCCC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTY-HPCFSIDIIIPTAPFVSSAGTDDYIASVSAT-APSVTFHQLPPPVSGLPDTL 80 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~-G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~f~~~~~~~~~l~~~~ 80 (481)
+||+++|+|++||++|++.||++|+++ | |+|||+++.... ++..+++.... ..+++|+.++... +++ .
T Consensus 7 ~~vl~~p~p~~GHv~P~l~La~~L~~r~G--h~Vt~~t~~~~~-----~~~~~~~~~~~~~~~i~~~~l~~~~--~~~-~ 76 (480)
T 2vch_A 7 PHVAIIPSPGMGHLIPLVEFAKRLVHLHG--LTVTFVIAGEGP-----PSKAQRTVLDSLPSSISSVFLPPVD--LTD-L 76 (480)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHHHC--CEEEEEECCSSS-----CC-CHHHHHC-CCTTEEEEECCCCC--CTT-S
T ss_pred cEEEEecCcchhHHHHHHHHHHHHHhCCC--CEEEEEECCCcc-----hhhhhhhhccccCCCceEEEcCCCC--CCC-C
Confidence 599999999999999999999999998 9 999999876431 12223221111 3589999998642 221 1
Q ss_pred CCCCCchHHHHHHHHhhhHHHHHHHHHhhccCCc-cEEEECCCCcchHHhhhhhcCCceEEEeccchhhHhhHhhhcccc
Q 042987 81 RSPADFPALVYELGELNNPKLHETLITISKRSNL-KAFVIDFFCNPAFQVSSSTLSIPTYYYFTTAGSVLAANLYLPTLH 159 (481)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~p-D~VI~D~~~~~~~~~A~~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 159 (481)
....+....+........+.++++++++.+..++ ||||+|.++.|+..+| +++|||++.+++++++..+.+.++|...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA-~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 155 (480)
T 2vch_A 77 SSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVA-VEFHVPPYIFYPTTANVLSFFLHLPKLD 155 (480)
T ss_dssp CTTCCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHH-HHTTCCEEEEECSCHHHHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHH-HHcCCCEEEEECccHHHHHHHHHHHHHH
Confidence 1112333334445555667888888876322477 9999999999999999 9999999999999988877777766544
Q ss_pred cccCccccccCcccccCCCCCCCCcccCCCcccCCCchHHHHHHHHHhhhcccceEEEcCchhhhHHHHHHHHcccCCCC
Q 042987 160 KNTTKSFRELGSTLLNFPGFPPFPARDMALPMHDREGKVYKGLVDTGIQMAKSAGVIVNTFELLEERAIKAMLEGQCTPG 239 (481)
Q Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~ 239 (481)
.....+++.. .....+|+++++...+++..+..+....++.+.+......+.+++++|++.++|+..+..+.+. .
T Consensus 156 ~~~~~~~~~~-~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~----~ 230 (480)
T 2vch_A 156 ETVSCEFREL-TEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEP----G 230 (480)
T ss_dssp HHCCSCGGGC-SSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSC----C
T ss_pred hcCCCccccc-CCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhc----c
Confidence 3322222221 1123568888888888887665544345555555566677788999999999999888888761 2
Q ss_pred CCCCCeEEeCcccCCCCCCCCCCCcchhhhhhcCCCCCcEEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeCCCCC
Q 042987 240 ETSPPLYCIGPVVGRGNGENRGRDRHECLSWLDSKPSRSVLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRAPAPD 319 (481)
Q Consensus 240 ~~~~~v~~vGpl~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 319 (481)
++++++++|||++........+..+++|.+||+.++++++|||||||+...+.+++.+++++|++++++|||+++.....
T Consensus 231 ~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~ 310 (480)
T 2vch_A 231 LDKPPVYPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGI 310 (480)
T ss_dssp TTCCCEEECCCCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSS
T ss_pred cCCCcEEEEeccccccccccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcccc
Confidence 22478999999987542210013567899999998888999999999998889999999999999999999999864211
Q ss_pred Cc-c-c----cccccccCchhhHhhhcCCCeEeecccchhhhhcccCcceeeeccCchhHHHhHhcCCcEEecccccchh
Q 042987 320 SI-E-N----RSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNHESVGGFVTHCGWNSVLEGVCAGVPMLAWPLYAEQK 393 (481)
Q Consensus 320 ~~-~-~----~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~~~~~~~I~HgG~gt~~eal~~GvP~l~~P~~~DQ~ 393 (481)
+. + . +.+....+|+++.++++..|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+
T Consensus 311 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~ 390 (480)
T 2vch_A 311 ANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQK 390 (480)
T ss_dssp TTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred ccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccch
Confidence 00 0 0 0111235899999998888888877999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 042987 394 MIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEKGRAVKERAVAMKEAAAAAMRDGGSSRVALDNLVESFK 473 (481)
Q Consensus 394 ~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 473 (481)
.||+++++++|+|+.+...+ ++.+++++|+++|+++|+++++++||+||+++++++++++.+||++..++++|++.+.
T Consensus 391 ~na~~l~~~~G~g~~l~~~~--~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~ 468 (480)
T 2vch_A 391 MNAVLLSEDIRAALRPRAGD--DGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWK 468 (480)
T ss_dssp HHHHHHHHTTCCEECCCCCT--TSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCeEEEeeccc--CCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 99999866889999997651 2239999999999999985555669999999999999999999999999999999887
Q ss_pred h
Q 042987 474 R 474 (481)
Q Consensus 474 ~ 474 (481)
+
T Consensus 469 ~ 469 (480)
T 2vch_A 469 A 469 (480)
T ss_dssp H
T ss_pred H
Confidence 5
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=2.6e-63 Score=503.69 Aligned_cols=439 Identities=26% Similarity=0.477 Sum_probs=329.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccC----C-CCCeeEEEcCCCCCCCC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSA----T-APSVTFHQLPPPVSGLP 77 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~f~~~~~~~~~l~ 77 (481)
+||+++|+|++||++|++.||++|++|| |+|||+++..... .+..... . .++++|+.+++. ++
T Consensus 9 ~~vl~~p~p~~GHi~P~l~La~~L~~rG--~~VT~v~t~~~~~-------~~~~~~~~~~~~~~~~i~~~~l~~~---lp 76 (482)
T 2pq6_A 9 PHVVMIPYPVQGHINPLFKLAKLLHLRG--FHITFVNTEYNHK-------RLLKSRGPKAFDGFTDFNFESIPDG---LT 76 (482)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTT--CEEEEEEEHHHHH-------HHC------------CEEEEEECCC---CC
T ss_pred CEEEEecCccchhHHHHHHHHHHHHhCC--CeEEEEeCCchhh-------hhccccccccccCCCceEEEECCCC---CC
Confidence 4999999999999999999999999999 9999998763211 1111100 0 148999999853 55
Q ss_pred CCC--CCCCCchHHHHHHH-HhhhHHHHHHHHHhhc---cCCccEEEECCCCcchHHhhhhhcCCceEEEeccchhhHhh
Q 042987 78 DTL--RSPADFPALVYELG-ELNNPKLHETLITISK---RSNLKAFVIDFFCNPAFQVSSSTLSIPTYYYFTTAGSVLAA 151 (481)
Q Consensus 78 ~~~--~~~~~~~~~~~~~~-~~~~~~~~~ll~~~~~---~~~pD~VI~D~~~~~~~~~A~~~lgiP~v~~~~~~~~~~~~ 151 (481)
... .........+...+ +.+.+.++++++.+.+ ..++||||+|.++.|+..+| +++|||++.+++++++....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA-~~lgiP~v~~~~~~~~~~~~ 155 (482)
T 2pq6_A 77 PMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAA-EEFELPNVLYFSSSACSLLN 155 (482)
T ss_dssp ---------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHH-HHTTCCEEEEECSCHHHHHH
T ss_pred CcccccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHH-HHcCCCEEEEecccHHHHHH
Confidence 411 01111222233333 4566788888887653 24899999999999999999 99999999999999877665
Q ss_pred HhhhcccccccCccccc-----c---CcccccCCCCCCCCcccCCCcccCC--CchHHHHHHHHHhhhcccceEEEcCch
Q 042987 152 NLYLPTLHKNTTKSFRE-----L---GSTLLNFPGFPPFPARDMALPMHDR--EGKVYKGLVDTGIQMAKSAGVIVNTFE 221 (481)
Q Consensus 152 ~~~~p~~~~~~~~~~~~-----~---~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (481)
+.+++.....+..+... . ......+|+++.++..+++..+... ...+.+.+.+..+...+.+++++||++
T Consensus 156 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~ 235 (482)
T 2pq6_A 156 VMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFN 235 (482)
T ss_dssp HTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCG
T ss_pred HHHHHHHHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChH
Confidence 54444321111111110 0 0111235677767777777655432 233444444555666778999999999
Q ss_pred hhhHHHHHHHHcccCCCCCCCCCeEEeCcccCC-CCC----------CCCCCCcchhhhhhcCCCCCcEEEEecCCCcCC
Q 042987 222 LLEERAIKAMLEGQCTPGETSPPLYCIGPVVGR-GNG----------ENRGRDRHECLSWLDSKPSRSVLFLCFGSLGSF 290 (481)
Q Consensus 222 ~le~~~~~~~~~~~~~~~~~~~~v~~vGpl~~~-~~~----------~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~ 290 (481)
+||++++..+.+.. +++++|||++.. ... ...++.+.+|.+||+.++++++|||||||+...
T Consensus 236 ~le~~~~~~~~~~~-------~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~ 308 (482)
T 2pq6_A 236 ELESDVINALSSTI-------PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVM 308 (482)
T ss_dssp GGGHHHHHHHHTTC-------TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCC
T ss_pred HHhHHHHHHHHHhC-------CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccC
Confidence 99999888777654 789999999763 111 010123456899999988889999999999888
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcccCcceeeeccCc
Q 042987 291 SSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNHESVGGFVTHCGW 370 (481)
Q Consensus 291 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~~~~~~~I~HgG~ 370 (481)
+.+++.+++++|++.+.+|||+++..... .....+|+++.++.. +|+.+.+|+||.++|.|+++++|||||||
T Consensus 309 ~~~~~~~~~~~l~~~~~~~l~~~~~~~~~------~~~~~l~~~~~~~~~-~~~~v~~~~pq~~~L~h~~~~~~vth~G~ 381 (482)
T 2pq6_A 309 TPEQLLEFAWGLANCKKSFLWIIRPDLVI------GGSVIFSSEFTNEIA-DRGLIASWCPQDKVLNHPSIGGFLTHCGW 381 (482)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCGGGST------TTGGGSCHHHHHHHT-TTEEEESCCCHHHHHTSTTEEEEEECCCH
T ss_pred CHHHHHHHHHHHHhcCCcEEEEEcCCccc------cccccCcHhHHHhcC-CCEEEEeecCHHHHhcCCCCCEEEecCCc
Confidence 88889999999999999999999753100 001237788877764 57888899999999999999999999999
Q ss_pred hhHHHhHhcCCcEEecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHH
Q 042987 371 NSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEKGRAVKERAVAMKEA 450 (481)
Q Consensus 371 gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~ 450 (481)
||++||+++|||+|++|+..||+.||+++++++|+|+.+. .+ +++++|.++|+++|+|+++++||+||+++++.
T Consensus 382 ~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~~-----~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~ 455 (482)
T 2pq6_A 382 NSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TN-----VKREELAKLINEVIAGDKGKKMKQKAMELKKK 455 (482)
T ss_dssp HHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-SS-----CCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-CC-----CCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999965789999998 56 89999999999999988667799999999999
Q ss_pred HHHHHhcCCChHHHHHHHHHHHHh
Q 042987 451 AAAAMRDGGSSRVALDNLVESFKR 474 (481)
Q Consensus 451 ~~~~~~~~g~~~~~~~~~~~~~~~ 474 (481)
+++++.+|||++.++++|++++..
T Consensus 456 ~~~a~~~gGss~~~l~~~v~~~~~ 479 (482)
T 2pq6_A 456 AEENTRPGGCSYMNLNKVIKDVLL 479 (482)
T ss_dssp HHHHTSTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHhcCCcHHHHHHHHHHHHHh
Confidence 999999999999999999998854
No 4
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.4e-62 Score=494.72 Aligned_cols=437 Identities=34% Similarity=0.647 Sum_probs=337.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCCCCCCCCCC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTY--HPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPPVSGLPDTL 80 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~--G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~l~~~~ 80 (481)
+||+++|+|++||++|++.||++|+++ | |+|||+++...... .++..+++.....++++|+.+++.. +++.
T Consensus 10 ~~vv~~p~p~~GHi~P~l~La~~L~~r~pG--~~Vt~v~t~~~~~~--~~~~~~~~~~~~~~~i~~~~lp~~~--~~~~- 82 (463)
T 2acv_A 10 SELIFIPAPGIGHLASALEFAKLLTNHDKN--LYITVFCIKFPGMP--FADSYIKSVLASQPQIQLIDLPEVE--PPPQ- 82 (463)
T ss_dssp EEEEEECCSSTTTHHHHHHHHHHHHHTCTT--EEEEEEECCCTTCC--CCHHHHHHHHCSCTTEEEEECCCCC--CCCG-
T ss_pred CEEEEEcCcccchHHHHHHHHHHHHhcCCC--cEEEEEEcCCcchh--hhhhhhhhcccCCCCceEEECCCCC--CCcc-
Confidence 499999999999999999999999999 8 99999987754322 2334443322234689999998641 3321
Q ss_pred CCCCCchHHHHHHHHhhhHHHHHHHHHhhccCCccEEEECCCCcchHHhhhhhcCCceEEEeccchhhHhhHhhhccccc
Q 042987 81 RSPADFPALVYELGELNNPKLHETLITISKRSNLKAFVIDFFCNPAFQVSSSTLSIPTYYYFTTAGSVLAANLYLPTLHK 160 (481)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~pD~VI~D~~~~~~~~~A~~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 160 (481)
+........+...+......++++++++ +..++||||+|.++.|+..+| +++|||++.+++++++.+..+.++|....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~-~~~~~d~vI~D~~~~~~~~vA-~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 160 (463)
T 2acv_A 83 ELLKSPEFYILTFLESLIPHVKATIKTI-LSNKVVGLVLDFFCVSMIDVG-NEFGIPSYLFLTSNVGFLSLMLSLKNRQI 160 (463)
T ss_dssp GGGGSHHHHHHHHHHHTHHHHHHHHHHH-CCTTEEEEEEEGGGGGGHHHH-HHTTCCEEEEESSCHHHHHHHHHGGGSCT
T ss_pred cccCCccHHHHHHHHhhhHHHHHHHHhc-cCCCCeEEEECCcchhHHHHH-HHcCCCEEEEeCchHHHHHHHHHHHhhcc
Confidence 1001111114445556677888888875 224899999999999999999 99999999999999988777777765531
Q ss_pred ccCccccccCcc---cccCCCC-CCCCcccCCCcccCCCchHHHHHHHHHhhhcccceEEEcCchhhhHHHHHHHHcccC
Q 042987 161 NTTKSFRELGST---LLNFPGF-PPFPARDMALPMHDREGKVYKGLVDTGIQMAKSAGVIVNTFELLEERAIKAMLEGQC 236 (481)
Q Consensus 161 ~~~~~~~~~~~~---~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~ 236 (481)
. .++... .. ...+|++ +++...+++..+.++ ...+..+.+......+.+++++|||.++|+.....+.+..+
T Consensus 161 ~--~~~~~~-~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~ 236 (463)
T 2acv_A 161 E--EVFDDS-DRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDE 236 (463)
T ss_dssp T--CCCCCS-SGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCT
T ss_pred c--CCCCCc-cccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccc
Confidence 1 111111 11 3457888 777777777655444 33555555666667788899999999999998888776431
Q ss_pred CCCCCCCCeEEeCcccCCCC-CC-C-CCCCcchhhhhhcCCCCCcEEEEecCCCc-CCCHHHHHHHHHHHHhCCCeEEEE
Q 042987 237 TPGETSPPLYCIGPVVGRGN-GE-N-RGRDRHECLSWLDSKPSRSVLFLCFGSLG-SFSSKQLKEMAIGLERSGVKFLWV 312 (481)
Q Consensus 237 ~~~~~~~~v~~vGpl~~~~~-~~-~-~~~~~~~l~~~l~~~~~~~~v~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i~~ 312 (481)
| .+++++|||++.... .. . .+..+.+|.+||+.++++++|||||||+. ..+.+++.+++++|++.+++|||+
T Consensus 237 -p---~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~ 312 (463)
T 2acv_A 237 -K---IPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWS 312 (463)
T ss_dssp -T---SCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred -c---CCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEE
Confidence 1 278999999986542 10 0 00234689999999888899999999999 888888999999999999999999
Q ss_pred EeCCCCCCccccccccccCchhhHhhhc-CCCeEeecccchhhhhcccCcceeeeccCchhHHHhHhcCCcEEecccccc
Q 042987 313 VRAPAPDSIENRSSLESLLPEGFLDRTK-DRGLVVESWAPQVEVLNHESVGGFVTHCGWNSVLEGVCAGVPMLAWPLYAE 391 (481)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~v~v~~~~p~~~ll~~~~~~~~I~HgG~gt~~eal~~GvP~l~~P~~~D 391 (481)
++.+ ...+|+++.++.. ++++.+.+|+||.++|.|+++++|||||||||++||+++|||+|++|++.|
T Consensus 313 ~~~~-----------~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~d 381 (463)
T 2acv_A 313 NSAE-----------KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAE 381 (463)
T ss_dssp CCCC-----------GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTT
T ss_pred ECCC-----------cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhh
Confidence 9752 1236777776651 246677799999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhceeeEee----cCCccCcccCHHHHHHHHHHHhc-CchhHHHHHHHHHHHHHHHHHHhcCCChHHHHH
Q 042987 392 QKMIRAVVVEEMKVGLAVT----RSEEKDRLVSAAELEQRVSELMD-SEKGRAVKERAVAMKEAAAAAMRDGGSSRVALD 466 (481)
Q Consensus 392 Q~~na~~v~~~~G~G~~l~----~~~~~~~~~~~~~l~~~i~~~l~-~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~ 466 (481)
|+.||+++++++|+|+.+. .. ++.+++++|.++|+++|+ +++ ||+||+++++.+++++.+|||++++++
T Consensus 382 Q~~Na~~lv~~~g~g~~l~~~~~~~---~~~~~~~~l~~ai~~ll~~~~~---~r~~a~~l~~~~~~a~~~gGss~~~l~ 455 (463)
T 2acv_A 382 QQLNAFRLVKEWGVGLGLRVDYRKG---SDVVAAEEIEKGLKDLMDKDSI---VHKKVQEMKEMSRNAVVDGGSSLISVG 455 (463)
T ss_dssp HHHHHHHHHHTSCCEEESCSSCCTT---CCCCCHHHHHHHHHHHTCTTCT---HHHHHHHHHHHHHHHTSTTSHHHHHHH
T ss_pred hHHHHHHHHHHcCeEEEEecccCCC---CccccHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 9999999646789999993 23 012899999999999997 456 999999999999999999999999999
Q ss_pred HHHHHHH
Q 042987 467 NLVESFK 473 (481)
Q Consensus 467 ~~~~~~~ 473 (481)
+|++++.
T Consensus 456 ~~v~~~~ 462 (463)
T 2acv_A 456 KLIDDIT 462 (463)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9999874
No 5
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=2e-62 Score=492.23 Aligned_cols=438 Identities=21% Similarity=0.377 Sum_probs=327.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhcc-CCCCCeeEEEcCCCCCCCCCCCC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVS-ATAPSVTFHQLPPPVSGLPDTLR 81 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~f~~~~~~~~~l~~~~~ 81 (481)
+||+++|+|++||++|++.||++|+++|+++.||++++..... ....... ...++++|+.+++. ++++.+
T Consensus 8 ~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~------~~~~~~~~~~~~~i~~~~i~~g---lp~~~~ 78 (456)
T 2c1x_A 8 PHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNA------SIFHDSMHTMQCNIKSYDISDG---VPEGYV 78 (456)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHH------HHC-------CTTEEEEECCCC---CCTTCC
T ss_pred CEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHH------HhhccccccCCCceEEEeCCCC---CCCccc
Confidence 5999999999999999999999999997446678776531111 0111000 01248999999753 555432
Q ss_pred CCCCchHHHHHHHHhhhHHHHHHHHHhhc--cCCccEEEECCCCcchHHhhhhhcCCceEEEeccchhhHhhHhhhcccc
Q 042987 82 SPADFPALVYELGELNNPKLHETLITISK--RSNLKAFVIDFFCNPAFQVSSSTLSIPTYYYFTTAGSVLAANLYLPTLH 159 (481)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~--~~~pD~VI~D~~~~~~~~~A~~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 159 (481)
........+..+.+.....++++++++.+ ..++||||+|.++.|+..+| +++|||++.++++++..++.+.+.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA-~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 157 (456)
T 2c1x_A 79 FAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMA-AEMGVAWLPFWTAGPNSLSTHVYIDEIR 157 (456)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHH-HHHTCEEEEEECSCHHHHHHHHTHHHHH
T ss_pred ccCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHH-HHhCCCEEEEeCccHHHHHHHhhhHHHH
Confidence 21222333333333444556666665432 25899999999999999999 9999999999999887766655444322
Q ss_pred cc-cCccc-cccCcccccCCCCCCCCcccCCCcccCCC--chHHHHHHHHHhhhcccceEEEcCchhhhHHHHHHHHccc
Q 042987 160 KN-TTKSF-RELGSTLLNFPGFPPFPARDMALPMHDRE--GKVYKGLVDTGIQMAKSAGVIVNTFELLEERAIKAMLEGQ 235 (481)
Q Consensus 160 ~~-~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~ 235 (481)
.. +..+. .........+|++++++..+++..+.... ..+.+.+.+......+.+++++||++++|+.++..+.+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~ 237 (456)
T 2c1x_A 158 EKIGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKL 237 (456)
T ss_dssp HHHCSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHS
T ss_pred hccCCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcC
Confidence 11 10010 00111122478888878888876543221 2233333344455577889999999999999887777765
Q ss_pred CCCCCCCCCeEEeCcccCCCCCCCCCCCcchhhhhhcCCCCCcEEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeC
Q 042987 236 CTPGETSPPLYCIGPVVGRGNGENRGRDRHECLSWLDSKPSRSVLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRA 315 (481)
Q Consensus 236 ~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 315 (481)
|++++|||++...+... ++.+.+|.+||+.++++++|||||||+...+.+++.+++++|++.+++|||+++.
T Consensus 238 -------~~~~~vGpl~~~~~~~~-~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~ 309 (456)
T 2c1x_A 238 -------KTYLNIGPFNLITPPPV-VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRD 309 (456)
T ss_dssp -------SCEEECCCHHHHC----------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCG
T ss_pred -------CCEEEecCcccCccccc-ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECC
Confidence 79999999986433210 1234569999999888899999999999888888999999999999999999975
Q ss_pred CCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcccCcceeeeccCchhHHHhHhcCCcEEecccccchhHH
Q 042987 316 PAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNHESVGGFVTHCGWNSVLEGVCAGVPMLAWPLYAEQKMI 395 (481)
Q Consensus 316 ~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~~~~~~~I~HgG~gt~~eal~~GvP~l~~P~~~DQ~~n 395 (481)
. ....+|+++.++.. +|+.+.+|+||.++|+|+++++|||||||||++||+++|||+|++|++.||+.|
T Consensus 310 ~----------~~~~l~~~~~~~~~-~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~N 378 (456)
T 2c1x_A 310 K----------ARVHLPEGFLEKTR-GYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLN 378 (456)
T ss_dssp G----------GGGGSCTTHHHHHT-TTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred c----------chhhCCHHHHhhcC-CceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHH
Confidence 3 12347788877654 577788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042987 396 RAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEKGRAVKERAVAMKEAAAAAMRDGGSSRVALDNLVESFKR 474 (481)
Q Consensus 396 a~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 474 (481)
|+++++.||+|+.+.... +++++|.++|+++|+|+++++||+||+++++.+++++.+||||+.++++|++++.+
T Consensus 379 a~~l~~~~g~g~~l~~~~-----~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 379 GRMVEDVLEIGVRIEGGV-----FTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp HHHHHHTSCCEEECGGGS-----CCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHhCeEEEecCCC-----cCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 999976669999998777 99999999999999988666799999999999999999999999999999998854
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1e-42 Score=348.52 Aligned_cols=390 Identities=20% Similarity=0.257 Sum_probs=257.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCCCCCCCCCCCC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPPVSGLPDTLRS 82 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~l~~~~~~ 82 (481)
+||+++++|++||++|+++||++|+++| |+|+|+++. .+...+... |++|+.++.. ++.+...
T Consensus 13 ~~Il~~~~~~~GHv~p~l~la~~L~~~G--h~V~~~~~~-------~~~~~~~~~-----g~~~~~~~~~---~~~~~~~ 75 (424)
T 2iya_A 13 RHISFFNIPGHGHVNPSLGIVQELVARG--HRVSYAITD-------EFAAQVKAA-----GATPVVYDSI---LPKESNP 75 (424)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTT--CEEEEEECG-------GGHHHHHHH-----TCEEEECCCC---SCCTTCT
T ss_pred ceEEEEeCCCCcccchHHHHHHHHHHCC--CeEEEEeCH-------HHHHHHHhC-----CCEEEecCcc---ccccccc
Confidence 4999999999999999999999999999 999999876 333344443 7889888764 3322111
Q ss_pred ----CCCchHHH---HHHHHhhhHHHHHHHHHhhccCCccEEEECCCCcchHHhhhhhcCCceEEEeccchhhHhhHhhh
Q 042987 83 ----PADFPALV---YELGELNNPKLHETLITISKRSNLKAFVIDFFCNPAFQVSSSTLSIPTYYYFTTAGSVLAANLYL 155 (481)
Q Consensus 83 ----~~~~~~~~---~~~~~~~~~~~~~ll~~~~~~~~pD~VI~D~~~~~~~~~A~~~lgiP~v~~~~~~~~~~~~~~~~ 155 (481)
..+....+ ........+.+.+++++ .+|||||+|.++.|+..+| +++|||++.+++.+..... +...
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~VI~d~~~~~~~~~A-~~lgIP~v~~~~~~~~~~~-~~~~ 149 (424)
T 2iya_A 76 EESWPEDQESAMGLFLDEAVRVLPQLEDAYAD----DRPDLIVYDIASWPAPVLG-RKWDIPFVQLSPTFVAYEG-FEED 149 (424)
T ss_dssp TCCCCSSHHHHHHHHHHHHHHHHHHHHHHTTT----SCCSEEEEETTCTHHHHHH-HHHTCCEEEEESSCCCCTT-HHHH
T ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCEEEEcCcccHHHHHH-HhcCCCEEEEecccccccc-cccc
Confidence 11211111 11111223333333333 4999999999888888899 9999999999887642211 1110
Q ss_pred cccccccCccccccCcccccCCCCCCCCcccCCCcccC-C-Cc---hHHHHHHHHH-------hhhcccceEEEcCchhh
Q 042987 156 PTLHKNTTKSFRELGSTLLNFPGFPPFPARDMALPMHD-R-EG---KVYKGLVDTG-------IQMAKSAGVIVNTFELL 223 (481)
Q Consensus 156 p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~-~~---~~~~~~~~~~-------~~~~~~~~~~~~~~~~l 223 (481)
+..... ++...+. +..++............ . .. .....+.+.. ......+.+++++.+++
T Consensus 150 ~~~~~~---~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l 221 (424)
T 2iya_A 150 VPAVQD---PTADRGE-----EAAAPAGTGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTF 221 (424)
T ss_dssp SGGGSC---CCC--------------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTT
T ss_pred cccccc---ccccccc-----ccccccccccchhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhh
Confidence 100000 0000000 00000000000000000 0 00 0011111110 01114567888888888
Q ss_pred hHHHHHHHHcccCCCCCCC-CCeEEeCcccCCCCCCCCCCCcchhhhhhcCCCCCcEEEEecCCCcCCCHHHHHHHHHHH
Q 042987 224 EERAIKAMLEGQCTPGETS-PPLYCIGPVVGRGNGENRGRDRHECLSWLDSKPSRSVLFLCFGSLGSFSSKQLKEMAIGL 302 (481)
Q Consensus 224 e~~~~~~~~~~~~~~~~~~-~~v~~vGpl~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al 302 (481)
++.. +.+ +++++|||+..... +..+|++..+++++|||++||......+.+..+++++
T Consensus 222 ~~~~------------~~~~~~~~~vGp~~~~~~---------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al 280 (424)
T 2iya_A 222 QIKG------------DTVGDNYTFVGPTYGDRS---------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAV 280 (424)
T ss_dssp STTG------------GGCCTTEEECCCCCCCCG---------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHH
T ss_pred CCCc------------cCCCCCEEEeCCCCCCcc---------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHH
Confidence 7521 112 57999999764211 1335777666677999999999866677888999999
Q ss_pred HhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcccCcceeeeccCchhHHHhHhcCCc
Q 042987 303 ERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNHESVGGFVTHCGWNSVLEGVCAGVP 382 (481)
Q Consensus 303 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~~~~~~~I~HgG~gt~~eal~~GvP 382 (481)
++.+.+++|.++.... .+.+. . .++|+.+.+|+||.++|+|+++ ||||||+||++||+++|+|
T Consensus 281 ~~~~~~~~~~~g~~~~-------------~~~~~-~-~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P 343 (424)
T 2iya_A 281 DGLDWHVVLSVGRFVD-------------PADLG-E-VPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVP 343 (424)
T ss_dssp TTCSSEEEEECCTTSC-------------GGGGC-S-CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCC
T ss_pred hcCCcEEEEEECCcCC-------------hHHhc-c-CCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCC
Confidence 9889999999875310 01110 1 2458889999999999999998 9999999999999999999
Q ss_pred EEecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChH
Q 042987 383 MLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEKGRAVKERAVAMKEAAAAAMRDGGSSR 462 (481)
Q Consensus 383 ~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~ 462 (481)
+|++|+..||+.||++++ ++|+|+.+...+ +++++|.++|+++|+|++ ++++++++++++++ .+|..
T Consensus 344 ~i~~p~~~dQ~~na~~l~-~~g~g~~~~~~~-----~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~~~---~~~~~- 410 (424)
T 2iya_A 344 MVAVPQIAEQTMNAERIV-ELGLGRHIPRDQ-----VTAEKLREAVLAVASDPG---VAERLAAVRQEIRE---AGGAR- 410 (424)
T ss_dssp EEECCCSHHHHHHHHHHH-HTTSEEECCGGG-----CCHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHT---SCHHH-
T ss_pred EEEecCccchHHHHHHHH-HCCCEEEcCcCC-----CCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHh---cCcHH-
Confidence 999999999999999995 679999998777 899999999999999987 99999999998873 34443
Q ss_pred HHHHHHHHHHHh
Q 042987 463 VALDNLVESFKR 474 (481)
Q Consensus 463 ~~~~~~~~~~~~ 474 (481)
+.++.+.+.+.+
T Consensus 411 ~~~~~i~~~~~~ 422 (424)
T 2iya_A 411 AAADILEGILAE 422 (424)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 666666655543
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=7.2e-43 Score=346.89 Aligned_cols=357 Identities=17% Similarity=0.194 Sum_probs=226.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCCCCC----CCC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPPVSG----LPD 78 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~----l~~ 78 (481)
+||+|+++|++||++|+++||++|+++| |+|||+++... +...+ .++.+..+...... .+.
T Consensus 23 MRIL~~~~p~~GHv~P~l~LA~~L~~rG--h~Vt~~t~~~~-------~~~~~------~g~~~~~~~~~~~~~~~~~~~ 87 (400)
T 4amg_A 23 MRALFITSPGLSHILPTVPLAQALRALG--HEVRYATGGDI-------RAVAE------AGLCAVDVSPGVNYAKLFVPD 87 (400)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHTT--CEEEEEECSST-------HHHHT------TTCEEEESSTTCCSHHHHSCC
T ss_pred CeEEEECCCchhHHHHHHHHHHHHHHCC--CEEEEEeCcch-------hhHHh------cCCeeEecCCchhHhhhcccc
Confidence 4799999999999999999999999999 99999987532 22222 26677776543221 111
Q ss_pred CCC------CCCCchHHH----HHHHHhhhHHHHHHHHHhhccCCccEEEECCCCcchHHhhhhhcCCceEEEeccchhh
Q 042987 79 TLR------SPADFPALV----YELGELNNPKLHETLITISKRSNLKAFVIDFFCNPAFQVSSSTLSIPTYYYFTTAGSV 148 (481)
Q Consensus 79 ~~~------~~~~~~~~~----~~~~~~~~~~~~~ll~~~~~~~~pD~VI~D~~~~~~~~~A~~~lgiP~v~~~~~~~~~ 148 (481)
... ........+ ..........+.++++++ +||+||+|.++.++..+| +++|||++.+...+...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~pD~Vv~d~~~~~~~~~A-~~~gip~~~~~~~~~~~ 162 (400)
T 4amg_A 88 DTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSW----RPDLVVHTPTQGAGPLTA-AALQLPCVELPLGPADS 162 (400)
T ss_dssp C------------CHHHHHHHHHHHHHHHHHHHHHHHHHH----CCSEEEECTTCTHHHHHH-HHTTCCEEECCSSTTTC
T ss_pred ccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCEEEECcchHHHHHHH-HHcCCCceeeccccccc
Confidence 100 000111111 112222344555666666 999999999888888888 99999999876654322
Q ss_pred HhhHhhhcccccccCccccccCcccccCCCCCCCCcccCCCcccCCCchHHHHHHHHHhhhcccceE-EEcCchhhhHHH
Q 042987 149 LAANLYLPTLHKNTTKSFRELGSTLLNFPGFPPFPARDMALPMHDREGKVYKGLVDTGIQMAKSAGV-IVNTFELLEERA 227 (481)
Q Consensus 149 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~le~~~ 227 (481)
......... ..+...+.+........... +........
T Consensus 163 ~~~~~~~~~--------------------------------------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 201 (400)
T 4amg_A 163 EPGLGALIR--------------------------------------RAMSKDYERHGVTGEPTGSVRLTTTPPSVE--- 201 (400)
T ss_dssp CHHHHHHHH--------------------------------------HHTHHHHHHTTCCCCCSCEEEEECCCHHHH---
T ss_pred ccchhhHHH--------------------------------------HHHHHHHHHhCCCcccccchhhcccCchhh---
Confidence 111100000 00000000000000011111 111111111
Q ss_pred HHHHHcccCCCCCCCCCeEEeCcccCCCCCCCCCCCcchhhhhhcCCCCCcEEEEecCCCcCCC--HHHHHHHHHHHHhC
Q 042987 228 IKAMLEGQCTPGETSPPLYCIGPVVGRGNGENRGRDRHECLSWLDSKPSRSVLFLCFGSLGSFS--SKQLKEMAIGLERS 305 (481)
Q Consensus 228 ~~~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~--~~~~~~~~~al~~~ 305 (481)
...... ...+..+.+.+... .....+.+|++..+++++|||||||+.... .+.+..+++++++.
T Consensus 202 --~~~~~~----~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~ 267 (400)
T 4amg_A 202 --ALLPED----RRSPGAWPMRYVPY--------NGGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADV 267 (400)
T ss_dssp --HTSCGG----GCCTTCEECCCCCC--------CCCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGS
T ss_pred --ccCccc----ccCCcccCcccccc--------cccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhcc
Confidence 000000 01133333333322 123345568888888899999999987443 35688899999999
Q ss_pred CCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcccCcceeeeccCchhHHHhHhcCCcEEe
Q 042987 306 GVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNHESVGGFVTHCGWNSVLEGVCAGVPMLA 385 (481)
Q Consensus 306 ~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~~~~~~~I~HgG~gt~~eal~~GvP~l~ 385 (481)
+..+||.+++.... ....+ ++|+.+.+|+||.++|+|+++ ||||||+||++||+++|||+|+
T Consensus 268 ~~~~v~~~~~~~~~-------~~~~~---------~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~ 329 (400)
T 4amg_A 268 DAEFVLTLGGGDLA-------LLGEL---------PANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCV 329 (400)
T ss_dssp SSEEEEECCTTCCC-------CCCCC---------CTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEE
T ss_pred CceEEEEecCcccc-------ccccC---------CCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEE
Confidence 99999998764111 11122 358889999999999999998 9999999999999999999999
Q ss_pred cccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHH
Q 042987 386 WPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEKGRAVKERAVAMKEAAAAAMRDGGSSRVAL 465 (481)
Q Consensus 386 ~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~ 465 (481)
+|+..||+.||++++ ++|+|+.++..+ ++++ +|+++|+|++ ||++|+++++++++ .+|.+ +.+
T Consensus 330 ~P~~~dQ~~na~~v~-~~G~g~~l~~~~-----~~~~----al~~lL~d~~---~r~~a~~l~~~~~~---~~~~~-~~a 392 (400)
T 4amg_A 330 IPHGSYQDTNRDVLT-GLGIGFDAEAGS-----LGAE----QCRRLLDDAG---LREAALRVRQEMSE---MPPPA-ETA 392 (400)
T ss_dssp CCC---CHHHHHHHH-HHTSEEECCTTT-----CSHH----HHHHHHHCHH---HHHHHHHHHHHHHT---SCCHH-HHH
T ss_pred ecCcccHHHHHHHHH-HCCCEEEcCCCC-----chHH----HHHHHHcCHH---HHHHHHHHHHHHHc---CCCHH-HHH
Confidence 999999999999995 669999998877 6665 5667888988 99999999999984 35443 455
Q ss_pred HHHH
Q 042987 466 DNLV 469 (481)
Q Consensus 466 ~~~~ 469 (481)
+.|.
T Consensus 393 ~~le 396 (400)
T 4amg_A 393 AXLV 396 (400)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.1e-41 Score=337.77 Aligned_cols=365 Identities=16% Similarity=0.157 Sum_probs=235.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCCCCCCCCCCCCC
Q 042987 4 TIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPPVSGLPDTLRSP 83 (481)
Q Consensus 4 ~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~l~~~~~~~ 83 (481)
||+++++|+.||++|+++||++|+++| |+|+|+++.. +...++.. +++|+.++....+......
T Consensus 2 ~Il~~~~~~~GHv~P~l~la~~L~~~G--h~V~~~~~~~-------~~~~v~~~-----g~~~~~i~~~~~~~~~~~~-- 65 (415)
T 1iir_A 2 RVLLATCGSRGDTEPLVALAVRVRDLG--ADVRMCAPPD-------CAERLAEV-----GVPHVPVGPSARAPIQRAK-- 65 (415)
T ss_dssp EEEEECCSCHHHHHHHHHHHHHHHHTT--CEEEEEECGG-------GHHHHHHT-----TCCEEECCC-------CCS--
T ss_pred eEEEEcCCCchhHHHHHHHHHHHHHCC--CeEEEEcCHH-------HHHHHHHc-----CCeeeeCCCCHHHHhhccc--
Confidence 699999999999999999999999999 9999998763 23334433 8899988864211111111
Q ss_pred CCchHHHHHHHHhhhHHHHHHHHHhhc-cCCccEEEECC-CCcc--hHHhhhhhcCCceEEEeccchhhHhhHhhhcccc
Q 042987 84 ADFPALVYELGELNNPKLHETLITISK-RSNLKAFVIDF-FCNP--AFQVSSSTLSIPTYYYFTTAGSVLAANLYLPTLH 159 (481)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~ll~~~~~-~~~pD~VI~D~-~~~~--~~~~A~~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 159 (481)
......+..... .....+++++.+ ..+||+||+|. +..+ +..+| +++|||++.+++++...... ++|...
T Consensus 66 ~~~~~~~~~~~~---~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A-~~lgiP~v~~~~~~~~~~~~--~~p~~~ 139 (415)
T 1iir_A 66 PLTAEDVRRFTT---EAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVA-EKLGIPYFYAFHCPSYVPSP--YYPPPP 139 (415)
T ss_dssp CCCHHHHHHHHH---HHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHH-HHHTCCEEEEESSGGGSCCS--SSCCCC
T ss_pred ccchHHHHHHHH---HHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHH-HHhCCCEEEEecCCCcCCCc--ccCCcc
Confidence 111111222221 112233333321 24899999997 5666 67788 99999999998876432110 111100
Q ss_pred cccCccccccCcccccCCCCCCCCcccCCCcccCCC-chHHHHHHHHHhh---hcc---------cceEEEcCchhhhHH
Q 042987 160 KNTTKSFRELGSTLLNFPGFPPFPARDMALPMHDRE-GKVYKGLVDTGIQ---MAK---------SAGVIVNTFELLEER 226 (481)
Q Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~---------~~~~~~~~~~~le~~ 226 (481)
. ...+++ ......+...+.... ...+....+.... ... ...+++++.+.+++.
T Consensus 140 ~------------~~~~~~--~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~l~~~ 205 (415)
T 1iir_A 140 L------------GEPSTQ--DTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAPL 205 (415)
T ss_dssp -----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC
T ss_pred C------------Cccccc--hHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCCCEEEeeChhhcCC
Confidence 0 000000 000000000000000 0000000000000 000 013455665555420
Q ss_pred HHHHHHcccCCCCCCCCCeEEeCcccCCCCCCCCCCCcchhhhhhcCCCCCcEEEEecCCCcCCCHHHHHHHHHHHHhCC
Q 042987 227 AIKAMLEGQCTPGETSPPLYCIGPVVGRGNGENRGRDRHECLSWLDSKPSRSVLFLCFGSLGSFSSKQLKEMAIGLERSG 306 (481)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~ 306 (481)
+...+ ++++|||+...... ..+.++.+||+.++ ++|||++||+. ...+.+..+++++++.+
T Consensus 206 -----------~~~~~-~~~~vG~~~~~~~~----~~~~~~~~~l~~~~--~~v~v~~Gs~~-~~~~~~~~~~~al~~~~ 266 (415)
T 1iir_A 206 -----------QPTDL-DAVQTGAWILPDER----PLSPELAAFLDAGP--PPVYLGFGSLG-APADAVRVAIDAIRAHG 266 (415)
T ss_dssp -----------CCCSS-CCEECCCCCCCCCC----CCCHHHHHHHHTSS--CCEEEECC----CCHHHHHHHHHHHHHTT
T ss_pred -----------CcccC-CeEeeCCCccCccc----CCCHHHHHHHhhCC--CeEEEeCCCCC-CcHHHHHHHHHHHHHCC
Confidence 11112 89999999875331 45778999998754 49999999987 56677888999999999
Q ss_pred CeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcccCcceeeeccCchhHHHhHhcCCcEEec
Q 042987 307 VKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNHESVGGFVTHCGWNSVLEGVCAGVPMLAW 386 (481)
Q Consensus 307 ~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~~~~~~~I~HgG~gt~~eal~~GvP~l~~ 386 (481)
.+++|+++.... . ...+ ++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++
T Consensus 267 ~~~v~~~g~~~~-------~-~~~~---------~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~ 327 (415)
T 1iir_A 267 RRVILSRGWADL-------V-LPDD---------GADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILL 327 (415)
T ss_dssp CCEEECTTCTTC-------C-CSSC---------GGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEEC
T ss_pred CeEEEEeCCCcc-------c-ccCC---------CCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEEC
Confidence 999999875310 0 0111 247889999999999988888 99999999999999999999999
Q ss_pred ccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHH
Q 042987 387 PLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEKGRAVKERAVAMKEAAA 452 (481)
Q Consensus 387 P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~ 452 (481)
|+..||+.||+++ +++|+|+.++..+ ++.++|.++|+++ +|++ +++++++++++++
T Consensus 328 p~~~dQ~~na~~l-~~~g~g~~~~~~~-----~~~~~l~~~i~~l-~~~~---~~~~~~~~~~~~~ 383 (415)
T 1iir_A 328 PQMADQPYYAGRV-AELGVGVAHDGPI-----PTFDSLSAALATA-LTPE---THARATAVAGTIR 383 (415)
T ss_dssp CCSTTHHHHHHHH-HHHTSEEECSSSS-----CCHHHHHHHHHHH-TSHH---HHHHHHHHHHHSC
T ss_pred CCCCccHHHHHHH-HHCCCcccCCcCC-----CCHHHHHHHHHHH-cCHH---HHHHHHHHHHHHh
Confidence 9999999999999 5679999998777 8999999999999 8887 9999999998876
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.2e-40 Score=332.40 Aligned_cols=376 Identities=13% Similarity=0.104 Sum_probs=246.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCCCCCCCCCCCCC
Q 042987 4 TIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPPVSGLPDTLRSP 83 (481)
Q Consensus 4 ~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~l~~~~~~~ 83 (481)
||+++++++.||++|+++||++|+++| |+|+|+++. .+...++.. |++|..++....+.......
T Consensus 2 rIl~~~~~~~GH~~p~l~la~~L~~~G--h~V~~~~~~-------~~~~~v~~~-----g~~~~~~~~~~~~~~~~~~~- 66 (416)
T 1rrv_A 2 RVLLSVCGTRGDVEIGVALADRLKALG--VQTRMCAPP-------AAEERLAEV-----GVPHVPVGLPQHMMLQEGMP- 66 (416)
T ss_dssp EEEEEEESCHHHHHHHHHHHHHHHHTT--CEEEEEECG-------GGHHHHHHH-----TCCEEECSCCGGGCCCTTSC-
T ss_pred eEEEEecCCCccHHHHHHHHHHHHHCC--CeEEEEeCH-------HHHHHHHHc-----CCeeeecCCCHHHHHhhccc-
Confidence 699999999999999999999999999 999999875 233444443 78899888642111111000
Q ss_pred CCchHHHHHHHHhhhHHHHHHHHHhhc-cCCccEEEECCC-Ccc--hHHhhhhhcCCceEEEeccchhhHhhHhhhcccc
Q 042987 84 ADFPALVYELGELNNPKLHETLITISK-RSNLKAFVIDFF-CNP--AFQVSSSTLSIPTYYYFTTAGSVLAANLYLPTLH 159 (481)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~ll~~~~~-~~~pD~VI~D~~-~~~--~~~~A~~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 159 (481)
......+...+.. ....+++.+.+ ..+||+||+|.+ ..+ +..+| +++|||++.+++++.+.... +.|.
T Consensus 67 ~~~~~~~~~~~~~---~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A-~~~giP~v~~~~~~~~~~~~--~~p~-- 138 (416)
T 1rrv_A 67 PPPPEEEQRLAAM---TVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVA-EKLGLPFFYSVPSPVYLASP--HLPP-- 138 (416)
T ss_dssp CCCHHHHHHHHHH---HHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHH-HHHTCCEEEEESSGGGSCCS--SSCC--
T ss_pred cchhHHHHHHHHH---HHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHH-HHcCCCEEEEeCCCCCCCCc--ccCC--
Confidence 1111112222211 12333333321 248999999974 444 56677 99999999988776432110 0110
Q ss_pred cccCccccccCcccccCCCCCCCCcccCCCcccCC-Cc--------hHHHHHHHHH---------hhhcccceEEEcCch
Q 042987 160 KNTTKSFRELGSTLLNFPGFPPFPARDMALPMHDR-EG--------KVYKGLVDTG---------IQMAKSAGVIVNTFE 221 (481)
Q Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~---------~~~~~~~~~~~~~~~ 221 (481)
. . +++ ....++...+... .. ...+.+.+.. ...... .+++++.+
T Consensus 139 ------~---------~-~~~-~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~ 200 (416)
T 1rrv_A 139 ------A---------Y-DEP-TTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADP 200 (416)
T ss_dssp ------C---------B-CSC-CCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCT
T ss_pred ------C---------C-CCC-CCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCc
Confidence 0 0 000 0000000000000 00 0000111000 000112 46667766
Q ss_pred hhhHHHHHHHHcccCCCCCCCCCeEEeCcccCCCCCCCCCCCcchhhhhhcCCCCCcEEEEecCCCcC-CCHHHHHHHHH
Q 042987 222 LLEERAIKAMLEGQCTPGETSPPLYCIGPVVGRGNGENRGRDRHECLSWLDSKPSRSVLFLCFGSLGS-FSSKQLKEMAI 300 (481)
Q Consensus 222 ~le~~~~~~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~~~~ 300 (481)
.+++ .++..++++|||+...... ..+.++.+|++.++ ++|||++||+.. ...+.+..+++
T Consensus 201 ~l~~-------------~~~~~~~~~vG~~~~~~~~----~~~~~~~~~l~~~~--~~v~v~~Gs~~~~~~~~~~~~~~~ 261 (416)
T 1rrv_A 201 VLAP-------------LQPDVDAVQTGAWLLSDER----PLPPELEAFLAAGS--PPVHIGFGSSSGRGIADAAKVAVE 261 (416)
T ss_dssp TTSC-------------CCSSCCCEECCCCCCCCCC----CCCHHHHHHHHSSS--CCEEECCTTCCSHHHHHHHHHHHH
T ss_pred cccC-------------CCCCCCeeeECCCccCccC----CCCHHHHHHHhcCC--CeEEEecCCCCccChHHHHHHHHH
Confidence 6653 1111289999999875332 45778899998764 499999999864 34556788999
Q ss_pred HHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcccCcceeeeccCchhHHHhHhcC
Q 042987 301 GLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNHESVGGFVTHCGWNSVLEGVCAG 380 (481)
Q Consensus 301 al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~~~~~~~I~HgG~gt~~eal~~G 380 (481)
++++.+.+++|+++... .. . ...++|+.+.+|+||.++|+++++ ||||||+||++||+++|
T Consensus 262 al~~~~~~~v~~~g~~~----------~~-~------~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G 322 (416)
T 1rrv_A 262 AIRAQGRRVILSRGWTE----------LV-L------PDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAG 322 (416)
T ss_dssp HHHHTTCCEEEECTTTT----------CC-C------SCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHT
T ss_pred HHHHCCCeEEEEeCCcc----------cc-c------cCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcC
Confidence 99999999999987641 00 0 012358889999999999998888 99999999999999999
Q ss_pred CcEEecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCC
Q 042987 381 VPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEKGRAVKERAVAMKEAAAAAMRDGGS 460 (481)
Q Consensus 381 vP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~ 460 (481)
+|+|++|+..||+.||++++ +.|+|+.++..+ ++.++|.++|+++ +|++ |++++++++++++. .+.
T Consensus 323 ~P~i~~p~~~dQ~~na~~l~-~~g~g~~~~~~~-----~~~~~l~~~i~~l-~~~~---~~~~~~~~~~~~~~----~~~ 388 (416)
T 1rrv_A 323 VPQLVIPRNTDQPYFAGRVA-ALGIGVAHDGPT-----PTFESLSAALTTV-LAPE---TRARAEAVAGMVLT----DGA 388 (416)
T ss_dssp CCEEECCCSBTHHHHHHHHH-HHTSEEECSSSC-----CCHHHHHHHHHHH-TSHH---HHHHHHHHTTTCCC----CHH
T ss_pred CCEEEccCCCCcHHHHHHHH-HCCCccCCCCCC-----CCHHHHHHHHHHh-hCHH---HHHHHHHHHHHHhh----cCc
Confidence 99999999999999999995 669999998777 8999999999999 8887 99999999988762 233
Q ss_pred hHHHHHHHHHHHH
Q 042987 461 SRVALDNLVESFK 473 (481)
Q Consensus 461 ~~~~~~~~~~~~~ 473 (481)
. +.++.+++.+.
T Consensus 389 ~-~~~~~i~e~~~ 400 (416)
T 1rrv_A 389 A-AAADLVLAAVG 400 (416)
T ss_dssp H-HHHHHHHHHHH
T ss_pred H-HHHHHHHHHHh
Confidence 3 55565523333
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=1.6e-40 Score=330.01 Aligned_cols=363 Identities=15% Similarity=0.157 Sum_probs=244.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCCCCCCCCC-CCC
Q 042987 4 TIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPPVSGLPDT-LRS 82 (481)
Q Consensus 4 ~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~l~~~-~~~ 82 (481)
||+|++.++.||++|+++||++|+++| |+|+++++. .++..++.. |+.|..++.....+... ...
T Consensus 2 rIli~~~gt~Ghv~p~~~La~~L~~~G--h~V~v~~~~-------~~~~~v~~~-----g~~~~~l~~~~~~~~~~~~~~ 67 (404)
T 3h4t_A 2 GVLITGCGSRGDTEPLVALAARLRELG--ADARMCLPP-------DYVERCAEV-----GVPMVPVGRAVRAGAREPGEL 67 (404)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHHTT--CCEEEEECG-------GGHHHHHHT-----TCCEEECSSCSSGGGSCTTCC
T ss_pred eEEEEeCCCCccHHHHHHHHHHHHHCC--CeEEEEeCH-------HHHHHHHHc-----CCceeecCCCHHHHhccccCC
Confidence 499999999999999999999999999 999999875 444555554 88999987542211000 011
Q ss_pred CCCchHHHHHHHHhhhHHHHHHHHHhhccCCccEEEECCCCcch---HHhhhhhcCCceEEEeccchhhHhhHhhhcccc
Q 042987 83 PADFPALVYELGELNNPKLHETLITISKRSNLKAFVIDFFCNPA---FQVSSSTLSIPTYYYFTTAGSVLAANLYLPTLH 159 (481)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~pD~VI~D~~~~~~---~~~A~~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 159 (481)
.......+...+. ..++.+.+.. .+||+||+|.....+ ..+| +++|||++.+..++....+...+ .
T Consensus 68 ~~~~~~~~~~~~~---~~~~~l~~~~---~~pD~Vi~~~~~~~~~~a~~~A-~~lgiP~v~~~~~p~~~~~~~~~-~--- 136 (404)
T 3h4t_A 68 PPGAAEVVTEVVA---EWFDKVPAAI---EGCDAVVTTGLLPAAVAVRSMA-EKLGIPYRYTVLSPDHLPSEQSQ-A--- 136 (404)
T ss_dssp CTTCGGGHHHHHH---HHHHHHHHHH---TTCSEEEEEECHHHHHHHHHHH-HHHTCCEEEEESSGGGSGGGSCH-H---
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHh---cCCCEEEECCchhhhhhhhhHH-hhcCCCEEEEEcCCccCCChhHH-H---
Confidence 1122222222222 2222222222 279999998765555 4577 99999999988776532110000 0
Q ss_pred cccCccccccCcccccCCCCCCCCcccCCCcccCC-CchHHHHHHHHHhhh---c---------ccceEEEcCchhhhHH
Q 042987 160 KNTTKSFRELGSTLLNFPGFPPFPARDMALPMHDR-EGKVYKGLVDTGIQM---A---------KSAGVIVNTFELLEER 226 (481)
Q Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~---------~~~~~~~~~~~~le~~ 226 (481)
.+. .... ....+....+..... . ..+..+.+..+.+.
T Consensus 137 ------~~~----------------------~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~-- 186 (404)
T 3h4t_A 137 ------ERD----------------------MYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLS-- 186 (404)
T ss_dssp ------HHH----------------------HHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTS--
T ss_pred ------HHH----------------------HHHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCccee--
Confidence 000 0000 000000001100000 0 00111222222221
Q ss_pred HHHHHHcccCCCCCCC-CCeEEeCcccCCCCCCCCCCCcchhhhhhcCCCCCcEEEEecCCCcCCCHHHHHHHHHHHHhC
Q 042987 227 AIKAMLEGQCTPGETS-PPLYCIGPVVGRGNGENRGRDRHECLSWLDSKPSRSVLFLCFGSLGSFSSKQLKEMAIGLERS 305 (481)
Q Consensus 227 ~~~~~~~~~~~~~~~~-~~v~~vGpl~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~ 305 (481)
|..++ ++++++|+++..... ..++++.+|++... ++|||++||+.. ..+.+..+++++++.
T Consensus 187 -----------p~~~~~~~~~~~G~~~~~~~~----~~~~~l~~~l~~~~--~~Vlv~~Gs~~~-~~~~~~~~~~al~~~ 248 (404)
T 3h4t_A 187 -----------PLRPTDLGTVQTGAWILPDQR----PLSAELEGFLRAGS--PPVYVGFGSGPA-PAEAARVAIEAVRAQ 248 (404)
T ss_dssp -----------CCCTTCCSCCBCCCCCCCCCC----CCCHHHHHHHHTSS--CCEEECCTTSCC-CTTHHHHHHHHHHHT
T ss_pred -----------CCCCCCCCeEEeCccccCCCC----CCCHHHHHHHhcCC--CeEEEECCCCCC-cHHHHHHHHHHHHhC
Confidence 12223 578899988765432 56788999998643 499999999987 667788899999999
Q ss_pred CCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcccCcceeeeccCchhHHHhHhcCCcEEe
Q 042987 306 GVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNHESVGGFVTHCGWNSVLEGVCAGVPMLA 385 (481)
Q Consensus 306 ~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~~~~~~~I~HgG~gt~~eal~~GvP~l~ 385 (481)
+.++||+++..... .. ..++|+.+.+|+||.++|+++++ +|||||+||++||+++|+|+|+
T Consensus 249 ~~~vv~~~g~~~~~-----------~~------~~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~ 309 (404)
T 3h4t_A 249 GRRVVLSSGWAGLG-----------RI------DEGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVV 309 (404)
T ss_dssp TCCEEEECTTTTCC-----------CS------SCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEE
T ss_pred CCEEEEEeCCcccc-----------cc------cCCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEE
Confidence 99999998764100 00 12458889999999999999998 9999999999999999999999
Q ss_pred cccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHH
Q 042987 386 WPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEKGRAVKERAVAMKEAAAAAMRDGGSSRVAL 465 (481)
Q Consensus 386 ~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~ 465 (481)
+|+..||+.||.+++ +.|+|+.+...+ ++.++|.++|.++++ ++ |+++++++++.++ + ....+.+
T Consensus 310 ~p~~~dQ~~na~~~~-~~G~g~~l~~~~-----~~~~~l~~ai~~ll~-~~---~~~~~~~~~~~~~---~--~~~~~~~ 374 (404)
T 3h4t_A 310 VPQKADQPYYAGRVA-DLGVGVAHDGPT-----PTVESLSAALATALT-PG---IRARAAAVAGTIR---T--DGTTVAA 374 (404)
T ss_dssp CCCSTTHHHHHHHHH-HHTSEEECSSSS-----CCHHHHHHHHHHHTS-HH---HHHHHHHHHTTCC---C--CHHHHHH
T ss_pred cCCcccHHHHHHHHH-HCCCEeccCcCC-----CCHHHHHHHHHHHhC-HH---HHHHHHHHHHHHh---h--hHHHHHH
Confidence 999999999999995 669999998877 899999999999998 76 9999999999876 2 3333566
Q ss_pred HHHHHHHH
Q 042987 466 DNLVESFK 473 (481)
Q Consensus 466 ~~~~~~~~ 473 (481)
+.+.+.+.
T Consensus 375 ~~i~~~~~ 382 (404)
T 3h4t_A 375 KLLLEAIS 382 (404)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66655554
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=8.8e-38 Score=311.83 Aligned_cols=375 Identities=13% Similarity=0.132 Sum_probs=247.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCCCCCCCCCCC-
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPPVSGLPDTLR- 81 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~l~~~~~- 81 (481)
+||+|+++++.||++|+++||++|+++| |+|+++++. .+...++.. ++.|..++.. ++....
T Consensus 21 ~rIl~~~~~~~GHv~p~l~La~~L~~~G--h~V~v~~~~-------~~~~~~~~~-----G~~~~~~~~~---~~~~~~~ 83 (415)
T 3rsc_A 21 AHLLIVNVASHGLILPTLTVVTELVRRG--HRVSYVTAG-------GFAEPVRAA-----GATVVPYQSE---IIDADAA 83 (415)
T ss_dssp CEEEEECCSCHHHHGGGHHHHHHHHHTT--CEEEEEECG-------GGHHHHHHT-----TCEEEECCCS---TTTCCHH
T ss_pred CEEEEEeCCCccccccHHHHHHHHHHCC--CEEEEEeCH-------HHHHHHHhc-----CCEEEecccc---ccccccc
Confidence 5899999999999999999999999999 999999854 334444443 7899988754 221100
Q ss_pred ---CCCCchHHHHH-HHH---hhhHHHHHHHHHhhccCCccEEEEC-CCCcchHHhhhhhcCCceEEEeccchhhHhhHh
Q 042987 82 ---SPADFPALVYE-LGE---LNNPKLHETLITISKRSNLKAFVID-FFCNPAFQVSSSTLSIPTYYYFTTAGSVLAANL 153 (481)
Q Consensus 82 ---~~~~~~~~~~~-~~~---~~~~~~~~ll~~~~~~~~pD~VI~D-~~~~~~~~~A~~~lgiP~v~~~~~~~~~~~~~~ 153 (481)
........+.. ... .....+.+++++ .+||+||+| ....++..+| +++|||++.+.+...... .+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~PDlVi~d~~~~~~~~~aA-~~~giP~v~~~~~~~~~~-~~~ 157 (415)
T 3rsc_A 84 EVFGSDDLGVRPHLMYLRENVSVLRATAEALDG----DVPDLVLYDDFPFIAGQLLA-ARWRRPAVRLSAAFASNE-HYS 157 (415)
T ss_dssp HHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSS----SCCSEEEEESTTHHHHHHHH-HHTTCCEEEEESSCCCCS-SCC
T ss_pred hhhccccHHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCEEEECchhhhHHHHHH-HHhCCCEEEEEecccccC-ccc
Confidence 00111112222 222 223334444444 499999999 6666777777 999999999875432110 000
Q ss_pred hhcccccccCccccccCcccccCCCCCCCCcccCCCcccCCCchHHHHHHHHH-------hhhccc-ceEEEcCchhhhH
Q 042987 154 YLPTLHKNTTKSFRELGSTLLNFPGFPPFPARDMALPMHDREGKVYKGLVDTG-------IQMAKS-AGVIVNTFELLEE 225 (481)
Q Consensus 154 ~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~le~ 225 (481)
..+.... ..... .+..+. ........+.... ...... +..+..+.+.+++
T Consensus 158 ~~~~~~~-------------~~~~~--------~p~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~ 215 (415)
T 3rsc_A 158 FSQDMVT-------------LAGTI--------DPLDLP-VFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQI 215 (415)
T ss_dssp HHHHHHH-------------HHTCC--------CGGGCH-HHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTST
T ss_pred ccccccc-------------ccccC--------ChhhHH-HHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCC
Confidence 0000000 00000 000000 0000011111100 001111 4445444433332
Q ss_pred HHHHHHHcccCCCCCCC-CCeEEeCcccCCCCCCCCCCCcchhhhhhcCCCCCcEEEEecCCCcCCCHHHHHHHHHHHHh
Q 042987 226 RAIKAMLEGQCTPGETS-PPLYCIGPVVGRGNGENRGRDRHECLSWLDSKPSRSVLFLCFGSLGSFSSKQLKEMAIGLER 304 (481)
Q Consensus 226 ~~~~~~~~~~~~~~~~~-~~v~~vGpl~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~ 304 (481)
. ...+ .++.++||+..... +..+|....+++++|||++||......+.+..+++++++
T Consensus 216 -----~-------~~~~~~~~~~vGp~~~~~~---------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~ 274 (415)
T 3rsc_A 216 -----A-------GDTFDDRFVFVGPCFDDRR---------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDG 274 (415)
T ss_dssp -----T-------GGGCCTTEEECCCCCCCCG---------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTT
T ss_pred -----C-------cccCCCceEEeCCCCCCcc---------cCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhc
Confidence 0 1111 46999999875321 233465545566799999999987777788899999999
Q ss_pred CCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcccCcceeeeccCchhHHHhHhcCCcEE
Q 042987 305 SGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNHESVGGFVTHCGWNSVLEGVCAGVPML 384 (481)
Q Consensus 305 ~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~~~~~~~I~HgG~gt~~eal~~GvP~l 384 (481)
.+.+++|.++.... .+.+. ..++|+.+.+|+|+.++|+++++ +|||||+||++||+++|+|+|
T Consensus 275 ~~~~~v~~~g~~~~-------------~~~l~--~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v 337 (415)
T 3rsc_A 275 QPWHVVMTLGGQVD-------------PAALG--DLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLV 337 (415)
T ss_dssp SSCEEEEECTTTSC-------------GGGGC--CCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEE
T ss_pred CCcEEEEEeCCCCC-------------hHHhc--CCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEE
Confidence 89999998875310 01111 12458889999999999999999 999999999999999999999
Q ss_pred ecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHH
Q 042987 385 AWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEKGRAVKERAVAMKEAAAAAMRDGGSSRVA 464 (481)
Q Consensus 385 ~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~ 464 (481)
++|+..||+.||.+++ +.|+|+.+...+ +++++|.++|.++|+|++ ++++++++++.+.. .+...+.
T Consensus 338 ~~p~~~~q~~~a~~l~-~~g~g~~~~~~~-----~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~~~----~~~~~~~ 404 (415)
T 3rsc_A 338 VVPQSFDVQPMARRVD-QLGLGAVLPGEK-----ADGDTLLAAVGAVAADPA---LLARVEAMRGHVRR----AGGAARA 404 (415)
T ss_dssp ECCCSGGGHHHHHHHH-HHTCEEECCGGG-----CCHHHHHHHHHHHHTCHH---HHHHHHHHHHHHHH----SCHHHHH
T ss_pred EeCCcchHHHHHHHHH-HcCCEEEcccCC-----CCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHh----cCHHHHH
Confidence 9999999999999996 559999998877 899999999999999988 99999999998874 3444466
Q ss_pred HHHHHHHHH
Q 042987 465 LDNLVESFK 473 (481)
Q Consensus 465 ~~~~~~~~~ 473 (481)
++.+.+.+.
T Consensus 405 ~~~i~~~~~ 413 (415)
T 3rsc_A 405 ADAVEAYLA 413 (415)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 776666554
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=9.8e-37 Score=302.81 Aligned_cols=381 Identities=16% Similarity=0.151 Sum_probs=247.9
Q ss_pred CCc-EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCCCCCCCCC
Q 042987 1 MKD-TIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPPVSGLPDT 79 (481)
Q Consensus 1 m~~-~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~l~~~ 79 (481)
|.+ ||+|+++++.||++|+++||++|+++| |+|+++++. .+...++.. |+.|..++.... ....
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~G--heV~v~~~~-------~~~~~~~~~-----G~~~~~~~~~~~-~~~~ 66 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRG--HRITYVTTP-------LFADEVKAA-----GAEVVLYKSEFD-TFHV 66 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTT--CEEEEEECH-------HHHHHHHHT-----TCEEEECCCGGG-TSSS
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCC--CEEEEEcCH-------HHHHHHHHc-----CCEEEecccccc-cccc
Confidence 555 999999999999999999999999999 999999864 333344443 789988875411 1111
Q ss_pred C--CCCCCchHHHHH-HHHh---hhHHHHHHHHHhhccCCccEEEEC-CCCcchHHhhhhhcCCceEEEeccchhhHhhH
Q 042987 80 L--RSPADFPALVYE-LGEL---NNPKLHETLITISKRSNLKAFVID-FFCNPAFQVSSSTLSIPTYYYFTTAGSVLAAN 152 (481)
Q Consensus 80 ~--~~~~~~~~~~~~-~~~~---~~~~~~~ll~~~~~~~~pD~VI~D-~~~~~~~~~A~~~lgiP~v~~~~~~~~~~~~~ 152 (481)
. .........+.. .... ....+.+++++ .+||+||+| .+..++..+| +++|||++.+.+...... .+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~Vi~d~~~~~~~~~aA-~~~giP~v~~~~~~~~~~-~~ 140 (402)
T 3ia7_A 67 PEVVKQEDAETQLHLVYVRENVAILRAAEEALGD----NPPDLVVYDVFPFIAGRLLA-ARWDRPAVRLTGGFAANE-HY 140 (402)
T ss_dssp SSSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHTT----CCCSEEEEESTTHHHHHHHH-HHHTCCEEEEESSCCCBT-TB
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCEEEECchHHHHHHHHH-HhhCCCEEEEecccccCc-cc
Confidence 0 111122222222 2222 23334444444 499999999 6677777777 999999999875433210 00
Q ss_pred hhhcccccccCccccccCcccccCCCCCCCCcccCCCcccCCCchHHHHHHHHH-------hhhccc-ceEEEcCchhhh
Q 042987 153 LYLPTLHKNTTKSFRELGSTLLNFPGFPPFPARDMALPMHDREGKVYKGLVDTG-------IQMAKS-AGVIVNTFELLE 224 (481)
Q Consensus 153 ~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~le 224 (481)
...+..... .. .. .+..+. ........+.... ...... +..+......++
T Consensus 141 ~~~~~~~~~-------------~~-~~-------~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~ 198 (402)
T 3ia7_A 141 SLFKELWKS-------------NG-QR-------HPADVE-AVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQ 198 (402)
T ss_dssp CHHHHHHHH-------------HT-CC-------CGGGSH-HHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGS
T ss_pred ccccccccc-------------cc-cc-------ChhhHH-HHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhC
Confidence 000000000 00 00 000000 0000011111000 001111 444544444443
Q ss_pred HHHHHHHHcccCCCCCCCCCeEEeCcccCCCCCCCCCCCcchhhhhhcCCCCCcEEEEecCCCcCCCHHHHHHHHHHHHh
Q 042987 225 ERAIKAMLEGQCTPGETSPPLYCIGPVVGRGNGENRGRDRHECLSWLDSKPSRSVLFLCFGSLGSFSSKQLKEMAIGLER 304 (481)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~ 304 (481)
+. ...+ ..++.++||+..... +..+|+...+++++|||++||......+.+..+++++++
T Consensus 199 ~~-----~~~~------~~~~~~vGp~~~~~~---------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~ 258 (402)
T 3ia7_A 199 PF-----AETF------DERFAFVGPTLTGRD---------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFAD 258 (402)
T ss_dssp TT-----GGGC------CTTEEECCCCCCC-------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTT
T ss_pred Cc-----cccC------CCCeEEeCCCCCCcc---------cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhc
Confidence 21 1110 156999999875322 123355445566799999999987777788999999999
Q ss_pred CCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcccCcceeeeccCchhHHHhHhcCCcEE
Q 042987 305 SGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNHESVGGFVTHCGWNSVLEGVCAGVPML 384 (481)
Q Consensus 305 ~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~~~~~~~I~HgG~gt~~eal~~GvP~l 384 (481)
.+.+++|.++.... . +.+. ..++|+.+.+|+|+.++|+++++ +|||||+||++||+++|+|+|
T Consensus 259 ~~~~~~~~~g~~~~---------~----~~~~--~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v 321 (402)
T 3ia7_A 259 TPWHVVMAIGGFLD---------P----AVLG--PLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLV 321 (402)
T ss_dssp SSCEEEEECCTTSC---------G----GGGC--SCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEE
T ss_pred CCcEEEEEeCCcCC---------h----hhhC--CCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEE
Confidence 89999998875310 0 1111 12458889999999999999999 999999999999999999999
Q ss_pred eccc-ccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHH
Q 042987 385 AWPL-YAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEKGRAVKERAVAMKEAAAAAMRDGGSSRV 463 (481)
Q Consensus 385 ~~P~-~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~ 463 (481)
++|. ..||+.|+.+++ +.|+|+.+...+ ++++.|.++|.++|+|++ ++++++++++++.+ .++..+
T Consensus 322 ~~p~~~~~q~~~a~~~~-~~g~g~~~~~~~-----~~~~~l~~~~~~ll~~~~---~~~~~~~~~~~~~~----~~~~~~ 388 (402)
T 3ia7_A 322 LVPHFATEAAPSAERVI-ELGLGSVLRPDQ-----LEPASIREAVERLAADSA---VRERVRRMQRDILS----SGGPAR 388 (402)
T ss_dssp ECGGGCGGGHHHHHHHH-HTTSEEECCGGG-----CSHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHT----SCHHHH
T ss_pred EeCCCcccHHHHHHHHH-HcCCEEEccCCC-----CCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHhh----CChHHH
Confidence 9999 999999999995 569999998877 899999999999999987 99999999988763 344446
Q ss_pred HHHHHHHHHHh
Q 042987 464 ALDNLVESFKR 474 (481)
Q Consensus 464 ~~~~~~~~~~~ 474 (481)
.++.+.+.+.+
T Consensus 389 ~~~~i~~~~~~ 399 (402)
T 3ia7_A 389 AADEVEAYLGR 399 (402)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 66666665543
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=4.1e-37 Score=309.23 Aligned_cols=375 Identities=13% Similarity=0.075 Sum_probs=234.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCCCC--CCCCC-
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPPVS--GLPDT- 79 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~--~l~~~- 79 (481)
+||+|+++|+.||++|+++||++|+++| |+|+++++. .+...++. .|+.|+.++.... ++...
T Consensus 21 mrIl~~~~~~~GHv~p~l~la~~L~~~G--heV~~~~~~-------~~~~~v~~-----~G~~~~~i~~~~~~~~~~~~~ 86 (441)
T 2yjn_A 21 MRVVFSSMASKSHLFGLVPLAWAFRAAG--HEVRVVASP-------ALTEDITA-----AGLTAVPVGTDVDLVDFMTHA 86 (441)
T ss_dssp CEEEEECCSCHHHHTTTHHHHHHHHHTT--CEEEEEECG-------GGHHHHHT-----TTCCEEECSCCCCHHHHHHHT
T ss_pred cEEEEEcCCCcchHhHHHHHHHHHHHCC--CeEEEEeCc-------hhHHHHHh-----CCCceeecCCccchHHHhhhh
Confidence 5899999999999999999999999999 999999865 33334443 3889999886421 01000
Q ss_pred ----------CC--C--CC-CchHHH---HHHHH---------h-hhHHHHHHHHHhhccCCccEEEECCCCcchHHhhh
Q 042987 80 ----------LR--S--PA-DFPALV---YELGE---------L-NNPKLHETLITISKRSNLKAFVIDFFCNPAFQVSS 131 (481)
Q Consensus 80 ----------~~--~--~~-~~~~~~---~~~~~---------~-~~~~~~~ll~~~~~~~~pD~VI~D~~~~~~~~~A~ 131 (481)
.. . .. .....+ ...+. . ....+.++++++ +||+||+|..+.++..+|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~pDlVv~d~~~~~~~~aA- 161 (441)
T 2yjn_A 87 GHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW----RPDLVIWEPLTFAAPIAA- 161 (441)
T ss_dssp THHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH----CCSEEEECTTCTHHHHHH-
T ss_pred hcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc----CCCEEEecCcchhHHHHH-
Confidence 00 0 00 001111 11111 1 233444455555 999999998776677778
Q ss_pred hhcCCceEEEeccchhhHhhHhhhcccccccCccccccCcccccCCCCCCCCcccCCCcccCCCchHHHHHHHHHhh---
Q 042987 132 STLSIPTYYYFTTAGSVLAANLYLPTLHKNTTKSFRELGSTLLNFPGFPPFPARDMALPMHDREGKVYKGLVDTGIQ--- 208 (481)
Q Consensus 132 ~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 208 (481)
+.+|||++.+...+............... ..+.. .+..........+.+....
T Consensus 162 ~~lgiP~v~~~~~~~~~~~~~~~~~~~~~--------------~~~~~----------~~~~~~~~~l~~~~~~~g~~~~ 217 (441)
T 2yjn_A 162 AVTGTPHARLLWGPDITTRARQNFLGLLP--------------DQPEE----------HREDPLAEWLTWTLEKYGGPAF 217 (441)
T ss_dssp HHHTCCEEEECSSCCHHHHHHHHHHHHGG--------------GSCTT----------TCCCHHHHHHHHHHHHTTCCCC
T ss_pred HHcCCCEEEEecCCCcchhhhhhhhhhcc--------------ccccc----------cccchHHHHHHHHHHHcCCCCC
Confidence 99999999986544321111100000000 00000 0000001111111111100
Q ss_pred ---hcccceEEEcCchhhhHHHHHHHHcccCCCCCCCCCeEEeCcccCCCCCCCCCCCcchhhhhhcCCCCCcEEEEecC
Q 042987 209 ---MAKSAGVIVNTFELLEERAIKAMLEGQCTPGETSPPLYCIGPVVGRGNGENRGRDRHECLSWLDSKPSRSVLFLCFG 285 (481)
Q Consensus 209 ---~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~G 285 (481)
....+..+.++.+.+++ ...++. ..+++... ..+.++.+|++..+++++|||++|
T Consensus 218 ~~~~~~~~~~l~~~~~~~~~-------------~~~~~~-~~~~~~~~--------~~~~~~~~~l~~~~~~~~v~v~~G 275 (441)
T 2yjn_A 218 DEEVVVGQWTIDPAPAAIRL-------------DTGLKT-VGMRYVDY--------NGPSVVPEWLHDEPERRRVCLTLG 275 (441)
T ss_dssp CGGGTSCSSEEECSCGGGSC-------------CCCCCE-EECCCCCC--------CSSCCCCGGGSSCCSSCEEEEEC-
T ss_pred CccccCCCeEEEecCccccC-------------CCCCCC-CceeeeCC--------CCCcccchHhhcCCCCCEEEEECC
Confidence 00122233333332221 111111 12222211 112346679887666779999999
Q ss_pred CCcCC---CHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcccCcc
Q 042987 286 SLGSF---SSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNHESVG 362 (481)
Q Consensus 286 S~~~~---~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~~~~~ 362 (481)
|+... ..+.+..+++++++.+.++||++++.. ...+. . .++|+.+.+|+||.++|+++++
T Consensus 276 s~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~----------~~~l~-----~-~~~~v~~~~~~~~~~ll~~ad~- 338 (441)
T 2yjn_A 276 ISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQ----------LEGVA-----N-IPDNVRTVGFVPMHALLPTCAA- 338 (441)
T ss_dssp ---------CCSTTTTHHHHHTSSSEEEECCCTTT----------TSSCS-----S-CCSSEEECCSCCHHHHGGGCSE-
T ss_pred CCcccccChHHHHHHHHHHHHcCCCEEEEEECCcc----------hhhhc-----c-CCCCEEEecCCCHHHHHhhCCE-
Confidence 99753 335577789999999999999987531 01110 1 2458889999999999999998
Q ss_pred eeeeccCchhHHHhHhcCCcEEecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCchhHHHHH
Q 042987 363 GFVTHCGWNSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEKGRAVKE 442 (481)
Q Consensus 363 ~~I~HgG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~ 442 (481)
||||||+||++||+++|+|+|++|+..||+.||++++ +.|+|+.++..+ ++.++|.++|.++++|++ +++
T Consensus 339 -~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~-~~g~g~~~~~~~-----~~~~~l~~~i~~ll~~~~---~~~ 408 (441)
T 2yjn_A 339 -TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQ-EFGAGIALPVPE-----LTPDQLRESVKRVLDDPA---HRA 408 (441)
T ss_dssp -EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHH-HHTSEEECCTTT-----CCHHHHHHHHHHHHHCHH---HHH
T ss_pred -EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHH-HcCCEEEccccc-----CCHHHHHHHHHHHhcCHH---HHH
Confidence 9999999999999999999999999999999999995 569999998877 899999999999999987 999
Q ss_pred HHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 042987 443 RAVAMKEAAAAAMRDGGSSRVALDNLVESFK 473 (481)
Q Consensus 443 ~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 473 (481)
+++++++.++. .++ ..+.++.+.+.+.
T Consensus 409 ~~~~~~~~~~~---~~~-~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 409 GAARMRDDMLA---EPS-PAEVVGICEELAA 435 (441)
T ss_dssp HHHHHHHHHHT---SCC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc---CCC-HHHHHHHHHHHHH
Confidence 99999998873 344 4356666655544
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=1.6e-36 Score=299.54 Aligned_cols=358 Identities=15% Similarity=0.121 Sum_probs=242.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCCC--CC------
Q 042987 4 TIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPPV--SG------ 75 (481)
Q Consensus 4 ~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~--~~------ 75 (481)
||++++.++.||++|+++|+++|+++| |+|+++++.. +...+... ++.++.++... ..
T Consensus 2 rIl~~~~~~~Gh~~p~~~la~~L~~~G--h~V~~~~~~~-------~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~ 67 (384)
T 2p6p_A 2 RILFVAAGSPATVFALAPLATAARNAG--HQVVMAANQD-------MGPVVTGV-----GLPAVATTDLPIRHFITTDRE 67 (384)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHTT--CEEEEEECGG-------GHHHHHHT-----TCCEEESCSSCHHHHHHBCTT
T ss_pred EEEEEeCCccchHhHHHHHHHHHHHCC--CEEEEEeCHH-------HHHHHHhC-----CCEEEEeCCcchHHHHhhhcc
Confidence 699999999999999999999999999 9999998652 22333332 78888887531 00
Q ss_pred -CCCCCCCCCCchHHH-H----HHHHhhhHHHHHHHHHhhccCCccEEEECCCCcchHHhhhhhcCCceEEEeccchhhH
Q 042987 76 -LPDTLRSPADFPALV-Y----ELGELNNPKLHETLITISKRSNLKAFVIDFFCNPAFQVSSSTLSIPTYYYFTTAGSVL 149 (481)
Q Consensus 76 -l~~~~~~~~~~~~~~-~----~~~~~~~~~~~~ll~~~~~~~~pD~VI~D~~~~~~~~~A~~~lgiP~v~~~~~~~~~~ 149 (481)
++............+ . .........+.+++++. +||+||+|.+..++..+| +++|||++.++..+...
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~pD~Vi~~~~~~~~~~~a-~~~giP~v~~~~~~~~~- 141 (384)
T 2p6p_A 68 GRPEAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAW----RPDLIVGGTMSYVAPLLA-LHLGVPHARQTWDAVDA- 141 (384)
T ss_dssp SCBCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CCSEEEEETTCTHHHHHH-HHHTCCEEEECCSSCCC-
T ss_pred cCccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhcc----CCcEEEECcchhhHHHHH-HhcCCCEEEeccCCccc-
Confidence 010000000111111 1 11112344555556665 999999998777777788 99999999876432100
Q ss_pred hhHhhhcccccccCccccccCcccccCCCCCCCCcccCCCcccCCCchHHHHHHHHHhh--hcccceEEEcCchhhhHHH
Q 042987 150 AANLYLPTLHKNTTKSFRELGSTLLNFPGFPPFPARDMALPMHDREGKVYKGLVDTGIQ--MAKSAGVIVNTFELLEERA 227 (481)
Q Consensus 150 ~~~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~le~~~ 227 (481)
.+ + ........+.+...... ....+.+++++.+.+++.
T Consensus 142 ---------------------------~~--------~----~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~- 181 (384)
T 2p6p_A 142 ---------------------------DG--------I----HPGADAELRPELSELGLERLPAPDLFIDICPPSLRPA- 181 (384)
T ss_dssp ---------------------------TT--------T----HHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT-
T ss_pred ---------------------------ch--------h----hHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC-
Confidence 00 0 00000001111111000 011456778877766531
Q ss_pred HHHHHcccCCCCCCCC--CeEEeCcccCCCCCCCCCCCcchhhhhhcCCCCCcEEEEecCCCcCC-----CHHHHHHHHH
Q 042987 228 IKAMLEGQCTPGETSP--PLYCIGPVVGRGNGENRGRDRHECLSWLDSKPSRSVLFLCFGSLGSF-----SSKQLKEMAI 300 (481)
Q Consensus 228 ~~~~~~~~~~~~~~~~--~v~~vGpl~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~-----~~~~~~~~~~ 300 (481)
.+++ ++.+++ . . .+.++.+|++..+++++|||++||+... +.+.+..+++
T Consensus 182 ------------~~~~~~~~~~~~-~--~--------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~ 238 (384)
T 2p6p_A 182 ------------NAAPARMMRHVA-T--S--------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAK 238 (384)
T ss_dssp ------------TSCCCEECCCCC-C--C--------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHH
T ss_pred ------------CCCCCCceEecC-C--C--------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHH
Confidence 0111 233332 1 1 1234667887655567999999999864 4567888999
Q ss_pred HHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcccCcceeeeccCchhHHHhHhcC
Q 042987 301 GLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNHESVGGFVTHCGWNSVLEGVCAG 380 (481)
Q Consensus 301 al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~~~~~~~I~HgG~gt~~eal~~G 380 (481)
++++.+.+++|++++. . .+.+. . .++|+.+ +|+||.++|+++++ ||||||+||++||+++|
T Consensus 239 al~~~~~~~~~~~g~~---------~-----~~~l~-~-~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G 299 (384)
T 2p6p_A 239 DLVRWDVELIVAAPDT---------V-----AEALR-A-EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAG 299 (384)
T ss_dssp HHHTTTCEEEEECCHH---------H-----HHHHH-H-HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTT
T ss_pred HHhcCCcEEEEEeCCC---------C-----HHhhC-C-CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhC
Confidence 9999999999987642 0 01111 1 2468889 99999999999998 99999999999999999
Q ss_pred CcEEecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCC
Q 042987 381 VPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEKGRAVKERAVAMKEAAAAAMRDGGS 460 (481)
Q Consensus 381 vP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~ 460 (481)
+|+|++|...||+.||.+++ +.|+|+.++..+ ++.++|.++|.++|+|++ +++++++++++++. .+|
T Consensus 300 ~P~v~~p~~~dq~~~a~~~~-~~g~g~~~~~~~-----~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~~~---~~~- 366 (384)
T 2p6p_A 300 VPQLLIPKGSVLEAPARRVA-DYGAAIALLPGE-----DSTEAIADSCQELQAKDT---YARRAQDLSREISG---MPL- 366 (384)
T ss_dssp CCEEECCCSHHHHHHHHHHH-HHTSEEECCTTC-----CCHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHT---SCC-
T ss_pred CCEEEccCcccchHHHHHHH-HCCCeEecCcCC-----CCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHh---CCC-
Confidence 99999999999999999995 669999998776 899999999999999987 99999999999883 344
Q ss_pred hHHHHHHHHHHHHhcc
Q 042987 461 SRVALDNLVESFKRGC 476 (481)
Q Consensus 461 ~~~~~~~~~~~~~~~~ 476 (481)
..+.++.+.+.+.++-
T Consensus 367 ~~~~~~~i~~~~~~~~ 382 (384)
T 2p6p_A 367 PATVVTALEQLAHHHH 382 (384)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhhcc
Confidence 4477777777776653
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=4.6e-36 Score=300.76 Aligned_cols=374 Identities=16% Similarity=0.193 Sum_probs=241.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCCCCCCCCCCCC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPPVSGLPDTLRS 82 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~l~~~~~~ 82 (481)
+||+++++++.||++|+++|+++|+++| |+|+++++... ...+.. .++.++.++.. ++.....
T Consensus 8 ~kIl~~~~~~~Gh~~p~~~la~~L~~~G--~~V~~~~~~~~-------~~~~~~-----~g~~~~~~~~~---~~~~~~~ 70 (430)
T 2iyf_A 8 AHIAMFSIAAHGHVNPSLEVIRELVARG--HRVTYAIPPVF-------ADKVAA-----TGPRPVLYHST---LPGPDAD 70 (430)
T ss_dssp CEEEEECCSCHHHHGGGHHHHHHHHHTT--CEEEEEECGGG-------HHHHHT-----TSCEEEECCCC---SCCTTSC
T ss_pred ceEEEEeCCCCccccchHHHHHHHHHCC--CeEEEEeCHHH-------HHHHHh-----CCCEEEEcCCc---Ccccccc
Confidence 4899999999999999999999999999 99999986632 222222 37888888753 2211110
Q ss_pred ----CCCchHHHHHH---HHhhhHHHHHHHHHhhccCCccEEEECCCCcchHHhhhhhcCCceEEEeccchhhHhhHhhh
Q 042987 83 ----PADFPALVYEL---GELNNPKLHETLITISKRSNLKAFVIDFFCNPAFQVSSSTLSIPTYYYFTTAGSVLAANLYL 155 (481)
Q Consensus 83 ----~~~~~~~~~~~---~~~~~~~~~~ll~~~~~~~~pD~VI~D~~~~~~~~~A~~~lgiP~v~~~~~~~~~~~~~~~~ 155 (481)
.......+..+ .......+.+++++ .+||+||+|.+..++..+| +++|||+|.+++.+.... .+...
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~Vi~d~~~~~~~~~A-~~~giP~v~~~~~~~~~~-~~~~~ 144 (430)
T 2iyf_A 71 PEAWGSTLLDNVEPFLNDAIQALPQLADAYAD----DIPDLVLHDITSYPARVLA-RRWGVPAVSLSPNLVAWK-GYEEE 144 (430)
T ss_dssp GGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTT----SCCSEEEEETTCHHHHHHH-HHHTCCEEEEESSCCCCT-THHHH
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHhhc----cCCCEEEECCccHHHHHHH-HHcCCCEEEEeccccccc-ccccc
Confidence 01211111111 11223344444444 3999999998767777788 999999999887553110 00000
Q ss_pred cccccccCccccccCcccccCCCCCCCCcccCCCcccCCCchHHHHHHHHH-------hhhcccceEEEcCchhhhHHHH
Q 042987 156 PTLHKNTTKSFRELGSTLLNFPGFPPFPARDMALPMHDREGKVYKGLVDTG-------IQMAKSAGVIVNTFELLEERAI 228 (481)
Q Consensus 156 p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~le~~~~ 228 (481)
+. . +.... ....++. . .+ ......+.... ......+.+++++.+.+++..
T Consensus 145 ~~--~----~~~~~---~~~~~~~--------~-~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~- 201 (430)
T 2iyf_A 145 VA--E----PMWRE---PRQTERG--------R-AY----YARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA- 201 (430)
T ss_dssp TH--H----HHHHH---HHHSHHH--------H-HH----HHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG-
T ss_pred cc--c----chhhh---hccchHH--------H-HH----HHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc-
Confidence 00 0 00000 0000000 0 00 00011111100 011135678888887776421
Q ss_pred HHHHcccCCCCCCCCC-eEEeCcccCCCCCCCCCCCcchhhhhhcCCCCCcEEEEecCCCcCCCHHHHHHHHHHHHhC-C
Q 042987 229 KAMLEGQCTPGETSPP-LYCIGPVVGRGNGENRGRDRHECLSWLDSKPSRSVLFLCFGSLGSFSSKQLKEMAIGLERS-G 306 (481)
Q Consensus 229 ~~~~~~~~~~~~~~~~-v~~vGpl~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~-~ 306 (481)
..+ + ++ +++|||++.... +..+|.+..+++++|||++||......+.+..+++++++. +
T Consensus 202 ----~~~---~---~~~v~~vG~~~~~~~---------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~ 262 (430)
T 2iyf_A 202 ----DRV---D---EDVYTFVGACQGDRA---------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPG 262 (430)
T ss_dssp ----GGS---C---TTTEEECCCCC--------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTT
T ss_pred ----ccC---C---CccEEEeCCcCCCCC---------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCC
Confidence 111 1 46 999998654211 0124655445667999999999855667788899999885 8
Q ss_pred CeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcccCcceeeeccCchhHHHhHhcCCcEEec
Q 042987 307 VKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNHESVGGFVTHCGWNSVLEGVCAGVPMLAW 386 (481)
Q Consensus 307 ~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~~~~~~~I~HgG~gt~~eal~~GvP~l~~ 386 (481)
.+++|.++.... . +.+. . .++|+.+.+|+||.++|.++++ ||||||+||++||+++|+|+|++
T Consensus 263 ~~~~~~~G~~~~---------~----~~l~-~-~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~ 325 (430)
T 2iyf_A 263 WHLVLQIGRKVT---------P----AELG-E-LPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAV 325 (430)
T ss_dssp EEEEEECC---C---------G----GGGC-S-CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEEC
T ss_pred eEEEEEeCCCCC---------h----HHhc-c-CCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEEC
Confidence 889888875310 0 1110 1 2358889999999999999998 99999999999999999999999
Q ss_pred ccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHH
Q 042987 387 PLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEKGRAVKERAVAMKEAAAAAMRDGGSSRVALD 466 (481)
Q Consensus 387 P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~ 466 (481)
|..+||+.|+.+++ +.|+|+.+...+ ++.++|.++|.++++|++ +++++.+.++++.+ ++ +..+.++
T Consensus 326 p~~~~q~~~a~~~~-~~g~g~~~~~~~-----~~~~~l~~~i~~ll~~~~---~~~~~~~~~~~~~~---~~-~~~~~~~ 392 (430)
T 2iyf_A 326 PQAVDQFGNADMLQ-GLGVARKLATEE-----ATADLLRETALALVDDPE---VARRLRRIQAEMAQ---EG-GTRRAAD 392 (430)
T ss_dssp CCSHHHHHHHHHHH-HTTSEEECCCC------CCHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHH---HC-HHHHHHH
T ss_pred CCccchHHHHHHHH-HcCCEEEcCCCC-----CCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHh---cC-cHHHHHH
Confidence 99999999999995 569999998776 899999999999999887 99999988888774 23 3335555
Q ss_pred HHHHH
Q 042987 467 NLVES 471 (481)
Q Consensus 467 ~~~~~ 471 (481)
.+.+.
T Consensus 393 ~i~~~ 397 (430)
T 2iyf_A 393 LIEAE 397 (430)
T ss_dssp HHHTT
T ss_pred HHHHH
Confidence 55443
No 16
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=1.2e-34 Score=287.39 Aligned_cols=351 Identities=16% Similarity=0.160 Sum_probs=230.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCCCCCCC----
Q 042987 2 KDTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPPVSGLP---- 77 (481)
Q Consensus 2 ~~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~l~---- 77 (481)
++||+|++.++.||++|+++|+++|+++| |+|+++++ ... ..+.. .|+.+..++.... +.
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~G--heV~v~~~-~~~-------~~~~~-----~G~~~~~~~~~~~-~~~~~~ 83 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAG--HDVLIAVA-EHA-------DRAAA-----AGLEVVDVAPDYS-AVKVFE 83 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTT--CEEEEEES-SCH-------HHHHT-----TTCEEEESSTTCC-HHHHHH
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCC--CEEEEecc-chH-------HHHHh-----CCCeeEecCCccC-HHHHhh
Confidence 35899999999999999999999999999 99999986 321 12332 3889988875311 00
Q ss_pred ---------------CCCCCCCCchHHHHHHHHhhhHHHHHHHHHhhccCCccEEEECCCCcchHHhhhhhcCCceEEEe
Q 042987 78 ---------------DTLRSPADFPALVYELGELNNPKLHETLITISKRSNLKAFVIDFFCNPAFQVSSSTLSIPTYYYF 142 (481)
Q Consensus 78 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~pD~VI~D~~~~~~~~~A~~~lgiP~v~~~ 142 (481)
............+..........+.++++++ +||+||+|....++..+| +++|||++.+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~pDlVv~d~~~~~~~~aA-~~~giP~v~~~ 158 (398)
T 3oti_A 84 QVAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY----RPDLVVYEQGATVGLLAA-DRAGVPAVQRN 158 (398)
T ss_dssp HHHHHCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH----CCSEEEEETTCHHHHHHH-HHHTCCEEEEC
T ss_pred hcccCCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc----CCCEEEECchhhHHHHHH-HHcCCCEEEEe
Confidence 0001111122223334445566778888887 999999997777777788 99999999875
Q ss_pred ccchhhHhhHhhhcccccccCccccccCcccccCCCCCCCCcccCCCcccCCCchHHHHHHHHHh-hhcccceEEEcCch
Q 042987 143 TTAGSVLAANLYLPTLHKNTTKSFRELGSTLLNFPGFPPFPARDMALPMHDREGKVYKGLVDTGI-QMAKSAGVIVNTFE 221 (481)
Q Consensus 143 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 221 (481)
.......... ....... ........ .....+..+.....
T Consensus 159 ~~~~~~~~~~------------------------------------~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~~ 198 (398)
T 3oti_A 159 QSAWRTRGMH------------------------------------RSIASFL----TDLMDKHQVSLPEPVATIESFPP 198 (398)
T ss_dssp CTTCCCTTHH------------------------------------HHHHTTC----HHHHHHTTCCCCCCSEEECSSCG
T ss_pred ccCCCccchh------------------------------------hHHHHHH----HHHHHHcCCCCCCCCeEEEeCCH
Confidence 4321100000 0000000 00000000 01111223322222
Q ss_pred hhhHHHHHHHHcccCCCCCCCCCeEEeCcccCCCCCCCCCCCcchhhhhhcCCCCCcEEEEecCCCcCC--CHHHHHHHH
Q 042987 222 LLEERAIKAMLEGQCTPGETSPPLYCIGPVVGRGNGENRGRDRHECLSWLDSKPSRSVLFLCFGSLGSF--SSKQLKEMA 299 (481)
Q Consensus 222 ~le~~~~~~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~--~~~~~~~~~ 299 (481)
.+... .......+.++ |. ..+..+.+|+...+++++|||++||.... ..+.+..++
T Consensus 199 ~~~~~-----------~~~~~~~~~~~-~~----------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~ 256 (398)
T 3oti_A 199 SLLLE-----------AEPEGWFMRWV-PY----------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPII 256 (398)
T ss_dssp GGGTT-----------SCCCSBCCCCC-CC----------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHH
T ss_pred HHCCC-----------CCCCCCCcccc-CC----------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHH
Confidence 22210 00000011111 00 11223445766556677999999999643 566788899
Q ss_pred HHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcccCcceeeeccCchhHHHhHhc
Q 042987 300 IGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNHESVGGFVTHCGWNSVLEGVCA 379 (481)
Q Consensus 300 ~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~~~~~~~I~HgG~gt~~eal~~ 379 (481)
+++++.+.+++|+.++.. .+.+. ..++|+.+.+|+|+.++|+++++ ||||||.||++||+++
T Consensus 257 ~~l~~~~~~~v~~~g~~~--------------~~~l~--~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~ 318 (398)
T 3oti_A 257 AAAGEVDADFVLALGDLD--------------ISPLG--TLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDA 318 (398)
T ss_dssp HHHHTSSSEEEEECTTSC--------------CGGGC--SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHH
T ss_pred HHHHcCCCEEEEEECCcC--------------hhhhc--cCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHh
Confidence 999999999999987641 01111 12458989999999999999998 9999999999999999
Q ss_pred CCcEEecccccchhHHH--HHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhc
Q 042987 380 GVPMLAWPLYAEQKMIR--AVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEKGRAVKERAVAMKEAAAAAMRD 457 (481)
Q Consensus 380 GvP~l~~P~~~DQ~~na--~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~ 457 (481)
|+|+|++|+..||+.|+ .+++ +.|+|+.++..+ .+++.|. ++++|++ ++++++++++++.+
T Consensus 319 G~P~v~~p~~~dq~~~a~~~~~~-~~g~g~~~~~~~-----~~~~~l~----~ll~~~~---~~~~~~~~~~~~~~---- 381 (398)
T 3oti_A 319 GIPQLLAPDPRDQFQHTAREAVS-RRGIGLVSTSDK-----VDADLLR----RLIGDES---LRTAAREVREEMVA---- 381 (398)
T ss_dssp TCCEEECCCTTCCSSCTTHHHHH-HHTSEEECCGGG-----CCHHHHH----HHHHCHH---HHHHHHHHHHHHHT----
T ss_pred CCCEEEcCCCchhHHHHHHHHHH-HCCCEEeeCCCC-----CCHHHHH----HHHcCHH---HHHHHHHHHHHHHh----
Confidence 99999999999999999 9995 669999998877 7888777 7888887 99999999998873
Q ss_pred CCChHHHHHHHHH
Q 042987 458 GGSSRVALDNLVE 470 (481)
Q Consensus 458 ~g~~~~~~~~~~~ 470 (481)
..+..+.++.+.+
T Consensus 382 ~~~~~~~~~~l~~ 394 (398)
T 3oti_A 382 LPTPAETVRRIVE 394 (398)
T ss_dssp SCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 3444355555544
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=1.9e-34 Score=286.03 Aligned_cols=343 Identities=13% Similarity=0.107 Sum_probs=212.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCCCC--CCC---
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPPVS--GLP--- 77 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~--~l~--- 77 (481)
+||+|++.++.||++|+++|+++|+++| |+|+++++. .+...+... |+.+..++.... ++.
T Consensus 16 MrIl~~~~~~~gh~~~~~~La~~L~~~G--heV~v~~~~-------~~~~~~~~~-----G~~~~~~~~~~~~~~~~~~~ 81 (398)
T 4fzr_A 16 MRILVIAGCSEGFVMPLVPLSWALRAAG--HEVLVAASE-------NMGPTVTGA-----GLPFAPTCPSLDMPEVLSWD 81 (398)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHTT--CEEEEEEEG-------GGHHHHHHT-----TCCEEEEESSCCHHHHHSBC
T ss_pred eEEEEEcCCCcchHHHHHHHHHHHHHCC--CEEEEEcCH-------HHHHHHHhC-----CCeeEecCCccchHhhhhhh
Confidence 5799999999999999999999999999 999999864 333344443 777777764211 000
Q ss_pred -CCCC--CCCCchH-------HHHHHHHhhhHHHHHHHHHhhccCCccEEEECCCCcchHHhhhhhcCCceEEEeccchh
Q 042987 78 -DTLR--SPADFPA-------LVYELGELNNPKLHETLITISKRSNLKAFVIDFFCNPAFQVSSSTLSIPTYYYFTTAGS 147 (481)
Q Consensus 78 -~~~~--~~~~~~~-------~~~~~~~~~~~~~~~ll~~~~~~~~pD~VI~D~~~~~~~~~A~~~lgiP~v~~~~~~~~ 147 (481)
.... ....... .+..........+.++++++ +||+||+|....++..+| +.+|||++.+......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~pDlVv~d~~~~~~~~~a-~~~giP~v~~~~~~~~ 156 (398)
T 4fzr_A 82 REGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW----KPDLVLTETYSLTGPLVA-ATLGIPWIEQSIRLAS 156 (398)
T ss_dssp TTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CCSEEEEETTCTHHHHHH-HHHTCCEEEECCSSCC
T ss_pred ccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCCEEEECccccHHHHHH-HhhCCCEEEeccCCCC
Confidence 0000 0001111 11122223445666667776 999999998677777778 9999999987654321
Q ss_pred hHhhHhhhcccccccCccccccCcccccCCCCCCCCcccCCCcccCCCchHHHHHHHHHh--hhcccceEEEcCchhhhH
Q 042987 148 VLAANLYLPTLHKNTTKSFRELGSTLLNFPGFPPFPARDMALPMHDREGKVYKGLVDTGI--QMAKSAGVIVNTFELLEE 225 (481)
Q Consensus 148 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~le~ 225 (481)
........ ............ .....+..+......+..
T Consensus 157 ~~~~~~~~----------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T 4fzr_A 157 PELIKSAG----------------------------------------VGELAPELAELGLTDFPDPLLSIDVCPPSMEA 196 (398)
T ss_dssp CHHHHHHH----------------------------------------HHHTHHHHHTTTCSSCCCCSEEEECSCGGGC-
T ss_pred chhhhHHH----------------------------------------HHHHHHHHHHcCCCCCCCCCeEEEeCChhhCC
Confidence 10000000 000000000000 001112233333333332
Q ss_pred HHHHHHHcccCCCCCCCCCeEEeCcccCCCCCCCCCCCcchhhhhhcCCCCCcEEEEecCCCcCC--------CHHHHHH
Q 042987 226 RAIKAMLEGQCTPGETSPPLYCIGPVVGRGNGENRGRDRHECLSWLDSKPSRSVLFLCFGSLGSF--------SSKQLKE 297 (481)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~--------~~~~~~~ 297 (481)
.. .. . ..++.++++. ....++.+|+...+++++|||++||.... ..+.+..
T Consensus 197 ~~-----~~----~--~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~ 255 (398)
T 4fzr_A 197 QP-----KP----G--TTKMRYVPYN----------GRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQA 255 (398)
T ss_dssp --------C----C--CEECCCCCCC----------CSSCCCCHHHHSCCSSCEEECC----------------CCSHHH
T ss_pred CC-----CC----C--CCCeeeeCCC----------CCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHH
Confidence 10 00 0 0011122110 01233556776555667999999999743 3355888
Q ss_pred HHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcccCcceeeeccCchhHHHhH
Q 042987 298 MAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNHESVGGFVTHCGWNSVLEGV 377 (481)
Q Consensus 298 ~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~~~~~~~I~HgG~gt~~eal 377 (481)
+++++++.+.+++|+.++.. . +.+. ..++|+.+.+|+|+.++|+++++ ||||||.||++||+
T Consensus 256 ~~~al~~~~~~~v~~~~~~~----------~----~~l~--~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~ 317 (398)
T 4fzr_A 256 LSQELPKLGFEVVVAVSDKL----------A----QTLQ--PLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCL 317 (398)
T ss_dssp HHHHGGGGTCEEEECCCC------------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHH
T ss_pred HHHHHHhCCCEEEEEeCCcc----------h----hhhc--cCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHH
Confidence 99999999999999877531 0 1111 12458999999999999999999 99999999999999
Q ss_pred hcCCcEEecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHH
Q 042987 378 CAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEKGRAVKERAVAMKEAAA 452 (481)
Q Consensus 378 ~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~ 452 (481)
++|+|+|++|+..||+.|+.+++ +.|+|+.++..+ ++++.|.++|.++|+|++ +++++++.++++.
T Consensus 318 ~~G~P~v~~p~~~~q~~~a~~~~-~~g~g~~~~~~~-----~~~~~l~~ai~~ll~~~~---~~~~~~~~~~~~~ 383 (398)
T 4fzr_A 318 SEGVPQVSVPVIAEVWDSARLLH-AAGAGVEVPWEQ-----AGVESVLAACARIRDDSS---YVGNARRLAAEMA 383 (398)
T ss_dssp HTTCCEEECCCSGGGHHHHHHHH-HTTSEEECC------------CHHHHHHHHHHCTH---HHHHHHHHHHHHT
T ss_pred HhCCCEEecCCchhHHHHHHHHH-HcCCEEecCccc-----CCHHHHHHHHHHHHhCHH---HHHHHHHHHHHHH
Confidence 99999999999999999999995 569999998877 899999999999999998 9999999998876
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=6.6e-33 Score=274.29 Aligned_cols=356 Identities=13% Similarity=0.143 Sum_probs=228.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEc-CCCCCCCCCC--
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQL-PPPVSGLPDT-- 79 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~-~~~~~~l~~~-- 79 (481)
+||+|++.++.||++|++.|+++|+++| |+|+++++. .+...+... |+.+..+ +.+.. +...
T Consensus 2 MrIl~~~~~~~gh~~~~~~la~~L~~~G--heV~v~~~~-------~~~~~~~~~-----g~~~~~~~~~~~~-~~~~~~ 66 (391)
T 3tsa_A 2 MRVLVVPLPYPTHLMAMVPLCWALQASG--HEVLIAAPP-------ELQATAHGA-----GLTTAGIRGNDRT-GDTGGT 66 (391)
T ss_dssp CEEEEECCSCHHHHHTTHHHHHHHHHTT--CEEEEEECH-------HHHHHHHHB-----TCEEEEC-------------
T ss_pred cEEEEEcCCCcchhhhHHHHHHHHHHCC--CEEEEecCh-------hhHHHHHhC-----CCceeeecCCccc-hhhhhh
Confidence 4799999999999999999999999999 999999754 223333333 7788777 33211 1100
Q ss_pred --CCC------CC---CchHHHHHHHHhh-------hHHHHHHHHHhhccCCccEEEECCCCcchHHhhhhhcCCceEEE
Q 042987 80 --LRS------PA---DFPALVYELGELN-------NPKLHETLITISKRSNLKAFVIDFFCNPAFQVSSSTLSIPTYYY 141 (481)
Q Consensus 80 --~~~------~~---~~~~~~~~~~~~~-------~~~~~~ll~~~~~~~~pD~VI~D~~~~~~~~~A~~~lgiP~v~~ 141 (481)
... .. .....+......+ ...+.++++++ +||+||+|.....+..+| +++|||++.+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~PD~Vv~~~~~~~~~~aa-~~~giP~v~~ 141 (391)
T 3tsa_A 67 TQLRFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW----RPSVLLVDVCALIGRVLG-GLLDLPVVLH 141 (391)
T ss_dssp --CCSCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CCSEEEEETTCHHHHHHH-HHTTCCEEEE
T ss_pred hcccccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc----CCCEEEeCcchhHHHHHH-HHhCCCEEEE
Confidence 000 00 0011112222223 55666777777 999999997666677777 9999999997
Q ss_pred eccchhhHhhHhhhcccccccCccccccCcccccCCCCCCCCcccCCCcccCCCchHHHHHHHHHhh--hcccceEEEcC
Q 042987 142 FTTAGSVLAANLYLPTLHKNTTKSFRELGSTLLNFPGFPPFPARDMALPMHDREGKVYKGLVDTGIQ--MAKSAGVIVNT 219 (481)
Q Consensus 142 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 219 (481)
.......... +......+.......... ....+.++..+
T Consensus 142 ~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (391)
T 3tsa_A 142 RWGVDPTAGP---------------------------------------FSDRAHELLDPVCRHHGLTGLPTPELILDPC 182 (391)
T ss_dssp CCSCCCTTTH---------------------------------------HHHHHHHHHHHHHHHTTSSSSCCCSEEEECS
T ss_pred ecCCcccccc---------------------------------------ccchHHHHHHHHHHHcCCCCCCCCceEEEec
Confidence 5432111000 000000011111111000 01113334333
Q ss_pred chhhhHHHHHHHHcccCCCCCCCCCeEEeCcccCCCCCCCCCCCcchhhhhhcCCCCCcEEEEecCCCcC--CC-HHHHH
Q 042987 220 FELLEERAIKAMLEGQCTPGETSPPLYCIGPVVGRGNGENRGRDRHECLSWLDSKPSRSVLFLCFGSLGS--FS-SKQLK 296 (481)
Q Consensus 220 ~~~le~~~~~~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~--~~-~~~~~ 296 (481)
..+++.. .......+.++ |. ..+..+.+|+...+++++|||++||... .. .+.+.
T Consensus 183 ~~~~~~~-----------~~~~~~~~~~~-p~----------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~ 240 (391)
T 3tsa_A 183 PPSLQAS-----------DAPQGAPVQYV-PY----------NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLR 240 (391)
T ss_dssp CGGGSCT-----------TSCCCEECCCC-CC----------CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHH
T ss_pred ChhhcCC-----------CCCccCCeeee-cC----------CCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHH
Confidence 3333210 00000112222 11 1122344677665667799999999853 23 66688
Q ss_pred HHHHHHHhC-CCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcccCcceeeeccCchhHHH
Q 042987 297 EMAIGLERS-GVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNHESVGGFVTHCGWNSVLE 375 (481)
Q Consensus 297 ~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~~~~~~~I~HgG~gt~~e 375 (481)
.++++ ++. +.+++|+.++.. ...+. ..++|+.+.+|+|+.++|+++++ ||||||.||++|
T Consensus 241 ~~~~~-~~~p~~~~v~~~~~~~----------~~~l~------~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~E 301 (391)
T 3tsa_A 241 AVAAA-TELPGVEAVIAVPPEH----------RALLT------DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFT 301 (391)
T ss_dssp HHHHH-HTSTTEEEEEECCGGG----------GGGCT------TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHH
T ss_pred HHHHh-ccCCCeEEEEEECCcc----------hhhcc------cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHH
Confidence 88888 877 788888876420 11111 12458889999999999999998 999999999999
Q ss_pred hHhcCCcEEecccccchhHHHHHHHHHhceeeEeec--CCccCcccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Q 042987 376 GVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTR--SEEKDRLVSAAELEQRVSELMDSEKGRAVKERAVAMKEAAAA 453 (481)
Q Consensus 376 al~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~--~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~ 453 (481)
|+++|+|+|++|+..||+.|+.+++ +.|+|+.+.. .+ .+.+.|.+++.++|+|++ ++++++++++.+..
T Consensus 302 a~~~G~P~v~~p~~~~q~~~a~~~~-~~g~g~~~~~~~~~-----~~~~~l~~ai~~ll~~~~---~~~~~~~~~~~~~~ 372 (391)
T 3tsa_A 302 ATRLGIPQLVLPQYFDQFDYARNLA-AAGAGICLPDEQAQ-----SDHEQFTDSIATVLGDTG---FAAAAIKLSDEITA 372 (391)
T ss_dssp HHHTTCCEEECCCSTTHHHHHHHHH-HTTSEEECCSHHHH-----TCHHHHHHHHHHHHTCTH---HHHHHHHHHHHHHT
T ss_pred HHHhCCCEEecCCcccHHHHHHHHH-HcCCEEecCccccc-----CCHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHc
Confidence 9999999999999999999999995 6699999988 66 789999999999999998 99999998888762
Q ss_pred HHhcCCChHHHHHHHHHH
Q 042987 454 AMRDGGSSRVALDNLVES 471 (481)
Q Consensus 454 ~~~~~g~~~~~~~~~~~~ 471 (481)
.++..+.++.+.+.
T Consensus 373 ----~~~~~~~~~~i~~~ 386 (391)
T 3tsa_A 373 ----MPHPAALVRTLENT 386 (391)
T ss_dssp ----SCCHHHHHHHHHHC
T ss_pred ----CCCHHHHHHHHHHH
Confidence 34444555555443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.97 E-value=6.2e-30 Score=254.71 Aligned_cols=363 Identities=15% Similarity=0.113 Sum_probs=235.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCC----------
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPP---------- 72 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~---------- 72 (481)
+||++++.++.||++|+++|+++|+++| |+|+++++.. +...+... ++.+..++..
T Consensus 21 MrIl~~~~~~~Gh~~~~~~la~~L~~~G--heV~v~~~~~-------~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~ 86 (412)
T 3otg_A 21 MRVLFASLGTHGHTYPLLPLATAARAAG--HEVTFATGEG-------FAGTLRKL-----GFEPVATGMPVFDGFLAALR 86 (412)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHTT--CEEEEEECGG-------GHHHHHHT-----TCEEEECCCCHHHHHHHHHH
T ss_pred eEEEEEcCCCcccHHHHHHHHHHHHHCC--CEEEEEccHH-------HHHHHHhc-----CCceeecCcccccchhhhhh
Confidence 5899999999999999999999999999 9999998652 22333333 7888888741
Q ss_pred ----CCCCCCC--CCCCCCchHHHHHH-HHhhhHHHHHHHHHhhccCCccEEEECCCCcchHHhhhhhcCCceEEEeccc
Q 042987 73 ----VSGLPDT--LRSPADFPALVYEL-GELNNPKLHETLITISKRSNLKAFVIDFFCNPAFQVSSSTLSIPTYYYFTTA 145 (481)
Q Consensus 73 ----~~~l~~~--~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~~~~~~pD~VI~D~~~~~~~~~A~~~lgiP~v~~~~~~ 145 (481)
....+.. ..........+... .......+.++++++ +||+||+|.....+..+| +++|||+|.+....
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~pDvVv~~~~~~~~~~aa-~~~giP~v~~~~~~ 161 (412)
T 3otg_A 87 IRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL----RPDLVVQEISNYGAGLAA-LKAGIPTICHGVGR 161 (412)
T ss_dssp HHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH----CCSEEEEETTCHHHHHHH-HHHTCCEEEECCSC
T ss_pred hhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc----CCCEEEECchhhHHHHHH-HHcCCCEEEecccc
Confidence 0000000 00001111111111 222346677777777 999999997666666677 99999999865432
Q ss_pred hhhHhhHhhhcccccccCccccccCcccccCCCCCCCCcccCCCcccCCCchHHHHHHHHHh-------hhcccceEEEc
Q 042987 146 GSVLAANLYLPTLHKNTTKSFRELGSTLLNFPGFPPFPARDMALPMHDREGKVYKGLVDTGI-------QMAKSAGVIVN 218 (481)
Q Consensus 146 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 218 (481)
......... .......+..... .....+.++..
T Consensus 162 ~~~~~~~~~----------------------------------------~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~ 201 (412)
T 3otg_A 162 DTPDDLTRS----------------------------------------IEEEVRGLAQRLGLDLPPGRIDGFGNPFIDI 201 (412)
T ss_dssp CCCSHHHHH----------------------------------------HHHHHHHHHHHTTCCCCSSCCGGGGCCEEEC
T ss_pred cCchhhhHH----------------------------------------HHHHHHHHHHHcCCCCCcccccCCCCeEEee
Confidence 110000000 0000000000000 01223345544
Q ss_pred CchhhhHHHHHHHHcccCCCCCCCCCeEEeCcccCCCCCCCCCCCcchhhhh-hcCCCCCcEEEEecCCCcCCCHHHHHH
Q 042987 219 TFELLEERAIKAMLEGQCTPGETSPPLYCIGPVVGRGNGENRGRDRHECLSW-LDSKPSRSVLFLCFGSLGSFSSKQLKE 297 (481)
Q Consensus 219 ~~~~le~~~~~~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~l~~~-l~~~~~~~~v~vs~GS~~~~~~~~~~~ 297 (481)
+...++... .... .....+-+. .. ....+..+| ....+++++|++++||......+.+..
T Consensus 202 ~~~~~~~~~-----~~~~------~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~ 262 (412)
T 3otg_A 202 FPPSLQEPE-----FRAR------PRRHELRPV---PF-----AEQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRA 262 (412)
T ss_dssp SCGGGSCHH-----HHTC------TTEEECCCC---CC-----CCCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHH
T ss_pred CCHHhcCCc-----ccCC------CCcceeecc---CC-----CCCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHH
Confidence 444333210 0000 111111111 11 111223445 233345669999999997666777889
Q ss_pred HHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcccCcceeeeccCchhHHHhH
Q 042987 298 MAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNHESVGGFVTHCGWNSVLEGV 377 (481)
Q Consensus 298 ~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~~~~~~~I~HgG~gt~~eal 377 (481)
+++++++.+..++|++++... ...+. ..++|+.+.+|+|+.++|.++++ ||+|||+||++||+
T Consensus 263 ~~~~l~~~~~~~~~~~g~~~~---------~~~l~------~~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~ 325 (412)
T 3otg_A 263 AIDGLAGLDADVLVASGPSLD---------VSGLG------EVPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGAL 325 (412)
T ss_dssp HHHHHHTSSSEEEEECCSSCC---------CTTCC------CCCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEECCCCC---------hhhhc------cCCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHH
Confidence 999999999999998876410 01111 02358889999999999999999 99999999999999
Q ss_pred hcCCcEEecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhc
Q 042987 378 CAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEKGRAVKERAVAMKEAAAAAMRD 457 (481)
Q Consensus 378 ~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~ 457 (481)
++|+|+|++|...||..|+.+++ +.|+|..+...+ +++++|.++|.++++|++ +++++.+.++++.+
T Consensus 326 a~G~P~v~~p~~~~q~~~~~~v~-~~g~g~~~~~~~-----~~~~~l~~ai~~ll~~~~---~~~~~~~~~~~~~~---- 392 (412)
T 3otg_A 326 GAGVPQLSFPWAGDSFANAQAVA-QAGAGDHLLPDN-----ISPDSVSGAAKRLLAEES---YRAGARAVAAEIAA---- 392 (412)
T ss_dssp HHTCCEEECCCSTTHHHHHHHHH-HHTSEEECCGGG-----CCHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHH----
T ss_pred HhCCCEEecCCchhHHHHHHHHH-HcCCEEecCccc-----CCHHHHHHHHHHHHhCHH---HHHHHHHHHHHHhc----
Confidence 99999999999999999999995 559999999877 899999999999999987 89988888887763
Q ss_pred CCChHHHHHHHHHHHH
Q 042987 458 GGSSRVALDNLVESFK 473 (481)
Q Consensus 458 ~g~~~~~~~~~~~~~~ 473 (481)
..+..+.++.+.+.+.
T Consensus 393 ~~~~~~~~~~~~~l~~ 408 (412)
T 3otg_A 393 MPGPDEVVRLLPGFAS 408 (412)
T ss_dssp SCCHHHHHTTHHHHHC
T ss_pred CCCHHHHHHHHHHHhc
Confidence 3455456666555543
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=4.9e-30 Score=250.40 Aligned_cols=325 Identities=14% Similarity=0.088 Sum_probs=196.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCCCCCCCCCC
Q 042987 1 MKDTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPPVSGLPDTL 80 (481)
Q Consensus 1 m~~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~l~~~~ 80 (481)
|++||+|.+.|+.||++|.++||++|+++| |+|+|++.....+ .+.++.. ++.++.++.. + ++...
T Consensus 1 M~~~i~i~~GGTgGHi~palala~~L~~~g--~~V~~vg~~~g~e-----~~~v~~~-----g~~~~~i~~~-~-~~~~~ 66 (365)
T 3s2u_A 1 MKGNVLIMAGGTGGHVFPALACAREFQARG--YAVHWLGTPRGIE-----NDLVPKA-----GLPLHLIQVS-G-LRGKG 66 (365)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHHHHHTT--CEEEEEECSSSTH-----HHHTGGG-----TCCEEECC----------
T ss_pred CCCcEEEEcCCCHHHHHHHHHHHHHHHhCC--CEEEEEECCchHh-----hchhhhc-----CCcEEEEECC-C-cCCCC
Confidence 889999999999999999999999999999 9999997543211 1233333 7788887643 1 22110
Q ss_pred CCCCCchHHHHHHHHhhhHHHHHHHHHhhccCCccEEEECCCCcc-hHHhhhhhcCCceEEEeccchhhHhhHhhhcccc
Q 042987 81 RSPADFPALVYELGELNNPKLHETLITISKRSNLKAFVIDFFCNP-AFQVSSSTLSIPTYYYFTTAGSVLAANLYLPTLH 159 (481)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~pD~VI~D~~~~~-~~~~A~~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 159 (481)
............. .......++++. +||+||++..... ...+||+.+|||++..-.
T Consensus 67 --~~~~~~~~~~~~~-~~~~~~~~l~~~----~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~---------------- 123 (365)
T 3s2u_A 67 --LKSLVKAPLELLK-SLFQALRVIRQL----RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ---------------- 123 (365)
T ss_dssp --------CHHHHHH-HHHHHHHHHHHH----CCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC----------------
T ss_pred --HHHHHHHHHHHHH-HHHHHHHHHHhc----CCCEEEEcCCcchHHHHHHHHHcCCCEEEEec----------------
Confidence 0111111112221 233456677887 9999998864432 333444999999987421
Q ss_pred cccCccccccCcccccCCCCCCCCcccCCCcccCCCchHHHHHHHHHhhhcccceEEEcCchhhhHHHHHHHHcccCCCC
Q 042987 160 KNTTKSFRELGSTLLNFPGFPPFPARDMALPMHDREGKVYKGLVDTGIQMAKSAGVIVNTFELLEERAIKAMLEGQCTPG 239 (481)
Q Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~ 239 (481)
..+||+ .+.++ .+..+.+. .++++..+
T Consensus 124 --------------n~~~G~-------------------~nr~l-----~~~a~~v~-~~~~~~~~-------------- 150 (365)
T 3s2u_A 124 --------------NAVAGT-------------------ANRSL-----APIARRVC-EAFPDTFP-------------- 150 (365)
T ss_dssp --------------SSSCCH-------------------HHHHH-----GGGCSEEE-ESSTTSSC--------------
T ss_pred --------------chhhhh-------------------HHHhh-----ccccceee-eccccccc--------------
Confidence 011111 00000 11122232 23321110
Q ss_pred CCCCCeEEeCcccCCCCCCCCCCCcchhhhhhcCCCCCcEEEEecCCCcCCCHHHHHHHHHHHHhC----CCeEEEEEeC
Q 042987 240 ETSPPLYCIGPVVGRGNGENRGRDRHECLSWLDSKPSRSVLFLCFGSLGSFSSKQLKEMAIGLERS----GVKFLWVVRA 315 (481)
Q Consensus 240 ~~~~~v~~vGpl~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~----~~~~i~~~~~ 315 (481)
...+.+++|..+...... ... ......++++.|+|..||....... +.+.++++.. +..++|++|.
T Consensus 151 -~~~k~~~~g~pvr~~~~~-----~~~--~~~~~~~~~~~ilv~gGs~g~~~~~--~~~~~al~~l~~~~~~~vi~~~G~ 220 (365)
T 3s2u_A 151 -ASDKRLTTGNPVRGELFL-----DAH--ARAPLTGRRVNLLVLGGSLGAEPLN--KLLPEALAQVPLEIRPAIRHQAGR 220 (365)
T ss_dssp -C---CEECCCCCCGGGCC-----CTT--SSCCCTTSCCEEEECCTTTTCSHHH--HHHHHHHHTSCTTTCCEEEEECCT
T ss_pred -CcCcEEEECCCCchhhcc-----chh--hhcccCCCCcEEEEECCcCCccccc--hhhHHHHHhcccccceEEEEecCc
Confidence 014677888544322110 000 1111223445899999998754333 3355555543 4567777765
Q ss_pred CCCCCccccccccccCchhhHhhh--cCCCeEeecccchh-hhhcccCcceeeeccCchhHHHhHhcCCcEEecccc---
Q 042987 316 PAPDSIENRSSLESLLPEGFLDRT--KDRGLVVESWAPQV-EVLNHESVGGFVTHCGWNSVLEGVCAGVPMLAWPLY--- 389 (481)
Q Consensus 316 ~~~~~~~~~~~~~~~lp~~~~~~~--~~~~v~v~~~~p~~-~ll~~~~~~~~I~HgG~gt~~eal~~GvP~l~~P~~--- 389 (481)
.. .+...+.. .+.++.+.+|+++. ++|..+|+ +|||+|.+|++|++++|+|+|++|+.
T Consensus 221 ~~--------------~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~ 284 (365)
T 3s2u_A 221 QH--------------AEITAERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAI 284 (365)
T ss_dssp TT--------------HHHHHHHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----
T ss_pred cc--------------cccccceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCC
Confidence 30 11122221 23467788999885 69999999 99999999999999999999999974
Q ss_pred -cchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCch-hHHHHHHHHHH
Q 042987 390 -AEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEK-GRAVKERAVAM 447 (481)
Q Consensus 390 -~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~-~~~~~~~a~~l 447 (481)
.+|..||+.++ +.|+|+.++..+ ++++.|.++|.++++|++ .+.|+++++++
T Consensus 285 ~~~Q~~NA~~l~-~~G~a~~l~~~~-----~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~ 338 (365)
T 3s2u_A 285 DDHQTRNAEFLV-RSGAGRLLPQKS-----TGAAELAAQLSEVLMHPETLRSMADQARSL 338 (365)
T ss_dssp CCHHHHHHHHHH-TTTSEEECCTTT-----CCHHHHHHHHHHHHHCTHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHH-HCCCEEEeecCC-----CCHHHHHHHHHHHHCCHHHHHHHHHHHHhc
Confidence 58999999996 559999999888 999999999999999987 34444444443
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=7.7e-27 Score=202.63 Aligned_cols=163 Identities=21% Similarity=0.367 Sum_probs=137.7
Q ss_pred CCcchhhhhhcCCCCCcEEEEecCCCc-CCCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhc
Q 042987 262 RDRHECLSWLDSKPSRSVLFLCFGSLG-SFSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTK 340 (481)
Q Consensus 262 ~~~~~l~~~l~~~~~~~~v~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~ 340 (481)
++++++.+|++..+++++|||++||.. ....+.+..+++++++.+.+++|++++.. ...+
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~----------~~~~--------- 66 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK----------PDTL--------- 66 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC----------CTTC---------
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC----------cccC---------
Confidence 567899999987766779999999996 45667788899999988999999987531 0111
Q ss_pred CCCeEeecccchhhhhcccCcceeeeccCchhHHHhHhcCCcEEecccccchhHHHHHHHHHhceeeEeecCCccCcccC
Q 042987 341 DRGLVVESWAPQVEVLNHESVGGFVTHCGWNSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVS 420 (481)
Q Consensus 341 ~~~v~v~~~~p~~~ll~~~~~~~~I~HgG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~ 420 (481)
++|+.+.+|+|+.++|.|+.+++||||||+||++||+++|+|+|++|...||+.||.+++ +.|+|+.++..+ ++
T Consensus 67 ~~~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~-~~g~g~~~~~~~-----~~ 140 (170)
T 2o6l_A 67 GLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMK-ARGAAVRVDFNT-----MS 140 (170)
T ss_dssp CTTEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH-TTTSEEECCTTT-----CC
T ss_pred CCcEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHH-HcCCeEEecccc-----CC
Confidence 348889999999999966666669999999999999999999999999999999999995 669999998877 89
Q ss_pred HHHHHHHHHHHhcCchhHHHHHHHHHHHHHHH
Q 042987 421 AAELEQRVSELMDSEKGRAVKERAVAMKEAAA 452 (481)
Q Consensus 421 ~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~ 452 (481)
.++|.++|.++++|++ |+++++++++.++
T Consensus 141 ~~~l~~~i~~ll~~~~---~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 141 STDLLNALKRVINDPS---YKENVMKLSRIQH 169 (170)
T ss_dssp HHHHHHHHHHHHHCHH---HHHHHHHHC----
T ss_pred HHHHHHHHHHHHcCHH---HHHHHHHHHHHhh
Confidence 9999999999999987 9999999998876
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.85 E-value=2.8e-19 Score=174.48 Aligned_cols=338 Identities=11% Similarity=0.051 Sum_probs=201.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCCCCCCCCCCCC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPPVSGLPDTLRS 82 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~l~~~~~~ 82 (481)
+||++++.+..||..+.+.|+++|.++| |+|++++..... ....+.. .++.+..++.. . +..
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G--~~V~v~~~~~~~-----~~~~~~~-----~g~~~~~~~~~-~-~~~---- 68 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQG--WQVRWLGTADRM-----EADLVPK-----HGIEIDFIRIS-G-LRG---- 68 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTT--CEEEEEECTTST-----HHHHGGG-----GTCEEEECCCC-C-CTT----
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcC--CEEEEEecCCcc-----hhhhccc-----cCCceEEecCC-c-cCc----
Confidence 6899999888899999999999999999 999999865321 1112222 26777777642 1 111
Q ss_pred CCCchHHHHHH--HHhhhHHHHHHHHHhhccCCccEEEECCCC-c-chHHhhhhhcCCceEEEeccchhhHhhHhhhccc
Q 042987 83 PADFPALVYEL--GELNNPKLHETLITISKRSNLKAFVIDFFC-N-PAFQVSSSTLSIPTYYYFTTAGSVLAANLYLPTL 158 (481)
Q Consensus 83 ~~~~~~~~~~~--~~~~~~~~~~ll~~~~~~~~pD~VI~D~~~-~-~~~~~A~~~lgiP~v~~~~~~~~~~~~~~~~p~~ 158 (481)
......+... .-.....+.+++++. +||+|+++... . .+..++ +.+|+|+|......
T Consensus 69 -~~~~~~~~~~~~~~~~~~~l~~~l~~~----~pDvv~~~~~~~~~~~~~~~-~~~~~p~v~~~~~~------------- 129 (364)
T 1f0k_A 69 -KGIKALIAAPLRIFNAWRQARAIMKAY----KPDVVLGMGGYVSGPGGLAA-WSLGIPVVLHEQNG------------- 129 (364)
T ss_dssp -CCHHHHHTCHHHHHHHHHHHHHHHHHH----CCSEEEECSSTTHHHHHHHH-HHTTCCEEEEECSS-------------
T ss_pred -CccHHHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEeCCcCchHHHHHH-HHcCCCEEEEecCC-------------
Confidence 1111111000 111234456666666 99999998643 2 234456 88999998643210
Q ss_pred ccccCccccccCcccccCCCCCCCCcccCCCcccCCCchHHHHHHHHHhhhcccceEEEcCchhhhHHHHHHHHcccCCC
Q 042987 159 HKNTTKSFRELGSTLLNFPGFPPFPARDMALPMHDREGKVYKGLVDTGIQMAKSAGVIVNTFELLEERAIKAMLEGQCTP 238 (481)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~ 238 (481)
.++ .... ......+.+++.+... +
T Consensus 130 -----------------~~~-------------------~~~~-----~~~~~~d~v~~~~~~~------------~--- 153 (364)
T 1f0k_A 130 -----------------IAG-------------------LTNK-----WLAKIATKVMQAFPGA------------F--- 153 (364)
T ss_dssp -----------------SCC-------------------HHHH-----HHTTTCSEEEESSTTS------------S---
T ss_pred -----------------CCc-------------------HHHH-----HHHHhCCEEEecChhh------------c---
Confidence 000 0000 0112344455433211 1
Q ss_pred CCCCCCeEEeCcccCCCCCCCCCCCcchhhhhhcCCCCCcEEEEecCCCcCCCHHHHHHHHHHHHhC--CCeEEEEEeCC
Q 042987 239 GETSPPLYCIGPVVGRGNGENRGRDRHECLSWLDSKPSRSVLFLCFGSLGSFSSKQLKEMAIGLERS--GVKFLWVVRAP 316 (481)
Q Consensus 239 ~~~~~~v~~vGpl~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~ 316 (481)
+++..+|..+....- ..+ ...+.+...+++++|++..|+... ......++++++.. +.++++++|..
T Consensus 154 ----~~~~~i~n~v~~~~~----~~~-~~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~ 222 (364)
T 1f0k_A 154 ----PNAEVVGNPVRTDVL----ALP-LPQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKG 222 (364)
T ss_dssp ----SSCEECCCCCCHHHH----TSC-CHHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTT
T ss_pred ----CCceEeCCccchhhc----ccc-hhhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCc
Confidence 355566643221100 000 111122222334467888888753 33344455666543 56666776653
Q ss_pred CCCCccccccccccCchhhHh---hhcCCCeEeecccch-hhhhcccCcceeeeccCchhHHHhHhcCCcEEecccc---
Q 042987 317 APDSIENRSSLESLLPEGFLD---RTKDRGLVVESWAPQ-VEVLNHESVGGFVTHCGWNSVLEGVCAGVPMLAWPLY--- 389 (481)
Q Consensus 317 ~~~~~~~~~~~~~~lp~~~~~---~~~~~~v~v~~~~p~-~~ll~~~~~~~~I~HgG~gt~~eal~~GvP~l~~P~~--- 389 (481)
. .+.+.+ +..-+++.+.+|+++ ..++..+++ +|+++|.+++.||+++|+|+|+.|..
T Consensus 223 ~--------------~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~ 286 (364)
T 1f0k_A 223 S--------------QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKD 286 (364)
T ss_dssp C--------------HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTT
T ss_pred h--------------HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCc
Confidence 1 112222 122247888899954 679999999 99999999999999999999999997
Q ss_pred cchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 042987 390 AEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEKGRAVKERAVAMKEAAAAAMRDGGSSRVALDNLV 469 (481)
Q Consensus 390 ~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 469 (481)
.||..|+..+.+ .|.|..++..+ ++.+++.++|.++ |++ .+++..+-+.+.. +..+..+.++.+.
T Consensus 287 ~~q~~~~~~~~~-~g~g~~~~~~d-----~~~~~la~~i~~l--~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~ 351 (364)
T 1f0k_A 287 RQQYWNALPLEK-AGAAKIIEQPQ-----LSVDAVANTLAGW--SRE---TLLTMAERARAAS----IPDATERVANEVS 351 (364)
T ss_dssp CHHHHHHHHHHH-TTSEEECCGGG-----CCHHHHHHHHHTC--CHH---HHHHHHHHHHHTC----CTTHHHHHHHHHH
T ss_pred hhHHHHHHHHHh-CCcEEEecccc-----CCHHHHHHHHHhc--CHH---HHHHHHHHHHHhh----ccCHHHHHHHHHH
Confidence 799999999964 49999988866 7799999999988 665 4433333222221 2344445555665
Q ss_pred HHHHhc
Q 042987 470 ESFKRG 475 (481)
Q Consensus 470 ~~~~~~ 475 (481)
+.+.+.
T Consensus 352 ~~y~~~ 357 (364)
T 1f0k_A 352 RVARAL 357 (364)
T ss_dssp HHHTTC
T ss_pred HHHHHH
Confidence 555543
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.60 E-value=2.1e-15 Score=133.89 Aligned_cols=140 Identities=14% Similarity=0.163 Sum_probs=92.7
Q ss_pred CCCcEEEEecCCCcCCCHHHHHHH-----HHHHHhCC-CeEEEEEeCCCCCCcccccccccc---------Cchhh----
Q 042987 275 PSRSVLFLCFGSLGSFSSKQLKEM-----AIGLERSG-VKFLWVVRAPAPDSIENRSSLESL---------LPEGF---- 335 (481)
Q Consensus 275 ~~~~~v~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~~---------lp~~~---- 335 (481)
+++++|||+.||... -.+.+..+ +++|.+.+ .++++++|....... ...... +|.+.
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~---~~~~~~~~~~~~~~l~p~~~~~~~ 101 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEF---EHLVQERGGQRESQKIPIDQFGCG 101 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCC---CSHHHHHTCEECSCCCSSCTTCTT
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhH---HHHHHhhhcccccccccccccccc
Confidence 445699999999842 23333333 48888777 789999986521000 000000 11000
Q ss_pred --Hh----hhcCCCeEeecccchh-hhhc-ccCcceeeeccCchhHHHhHhcCCcEEecccc----cchhHHHHHHHHHh
Q 042987 336 --LD----RTKDRGLVVESWAPQV-EVLN-HESVGGFVTHCGWNSVLEGVCAGVPMLAWPLY----AEQKMIRAVVVEEM 403 (481)
Q Consensus 336 --~~----~~~~~~v~v~~~~p~~-~ll~-~~~~~~~I~HgG~gt~~eal~~GvP~l~~P~~----~DQ~~na~~v~~~~ 403 (481)
.+ ....-++.+.+|+++. ++|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||++++ +.
T Consensus 102 ~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~-~~ 178 (224)
T 2jzc_A 102 DTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFV-EL 178 (224)
T ss_dssp CSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHH-HH
T ss_pred ccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHH-HC
Confidence 00 0001145566888876 7999 9999 99999999999999999999999984 47999999996 55
Q ss_pred ceeeEeecCCccCcccCHHHHHHHHHHH
Q 042987 404 KVGLAVTRSEEKDRLVSAAELEQRVSEL 431 (481)
Q Consensus 404 G~G~~l~~~~~~~~~~~~~~l~~~i~~~ 431 (481)
|+++.+ +.++|.++|.++
T Consensus 179 G~~~~~----------~~~~L~~~i~~l 196 (224)
T 2jzc_A 179 GYVWSC----------APTETGLIAGLR 196 (224)
T ss_dssp SCCCEE----------CSCTTTHHHHHH
T ss_pred CCEEEc----------CHHHHHHHHHHH
Confidence 998765 234556666665
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.53 E-value=7.1e-13 Score=122.70 Aligned_cols=117 Identities=10% Similarity=0.100 Sum_probs=87.9
Q ss_pred CcEEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhc-CCCeEeecccchh-h
Q 042987 277 RSVLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTK-DRGLVVESWAPQV-E 354 (481)
Q Consensus 277 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~v~v~~~~p~~-~ 354 (481)
.+.|+|++|.... .+....++++|.+.. ++.++++.... ..+.+..... ..|+.+..|+++. +
T Consensus 157 ~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~~------------~~~~l~~~~~~~~~v~v~~~~~~m~~ 221 (282)
T 3hbm_A 157 KYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSNP------------NLKKLQKFAKLHNNIRLFIDHENIAK 221 (282)
T ss_dssp CEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTCT------------THHHHHHHHHTCSSEEEEESCSCHHH
T ss_pred CCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCch------------HHHHHHHHHhhCCCEEEEeCHHHHHH
Confidence 4589999997642 234556788887654 56666665411 1122222221 2488898999887 5
Q ss_pred hhcccCcceeeeccCchhHHHhHhcCCcEEecccccchhHHHHHHHHHhceeeEeecC
Q 042987 355 VLNHESVGGFVTHCGWNSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRS 412 (481)
Q Consensus 355 ll~~~~~~~~I~HgG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 412 (481)
++..+++ +|++|| +|++|+++.|+|+|++|+..+|..||..++ +.|+++.+..-
T Consensus 222 ~m~~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~-~~G~~~~~~~~ 275 (282)
T 3hbm_A 222 LMNESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLA-KKGYEVEYKYL 275 (282)
T ss_dssp HHHTEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHH-HTTCEEECGGG
T ss_pred HHHHCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHH-HCCCEEEcchh
Confidence 9999999 999999 899999999999999999999999999996 55999998763
No 25
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.34 E-value=1.5e-11 Score=120.99 Aligned_cols=348 Identities=11% Similarity=0.085 Sum_probs=177.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeE-EEcCCCCCCCCCC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTY--HPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTF-HQLPPPVSGLPDT 79 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~--G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f-~~~~~~~~~l~~~ 79 (481)
++|++++ ++.....=+-.|.++|+++ | +++.++.+....+ ...+..+.+ ++.. +.+. +...
T Consensus 28 ~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~--~~~~~~~tG~h~~---m~~~~~~~~-----~i~~~~~l~-----v~~~ 91 (403)
T 3ot5_A 28 IKVMSIF-GTRPEAIKMAPLVLALEKEPET--FESTVVITAQHRE---MLDQVLEIF-----DIKPDIDLD-----IMKK 91 (403)
T ss_dssp EEEEEEE-CSHHHHHHHHHHHHHHHTCTTT--EEEEEEECC--------CHHHHHHT-----TCCCSEECC-----CCC-
T ss_pred ceEEEEE-ecChhHHHHHHHHHHHHhCCCC--CcEEEEEecCcHH---HHHHHHHhc-----CCCCCcccc-----cCCC
Confidence 3788877 6666667778899999988 5 9988766554422 122222222 2210 1111 1100
Q ss_pred CCCCCCchHHHHHHHHhhhHHHHHHHHHhhccCCccEEEECC--CCcc-hHHhhhhhcCCceEEEeccchhhHhhHhhhc
Q 042987 80 LRSPADFPALVYELGELNNPKLHETLITISKRSNLKAFVIDF--FCNP-AFQVSSSTLSIPTYYYFTTAGSVLAANLYLP 156 (481)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~pD~VI~D~--~~~~-~~~~A~~~lgiP~v~~~~~~~~~~~~~~~~p 156 (481)
.... ...+......+.+++++. +||+|++-. ...+ +..+| .++|||++.+.. +
T Consensus 92 ---~~~~----~~~~~~~~~~l~~~l~~~----kPD~Vi~~gd~~~~l~~~laA-~~~~IPv~h~~a-g----------- 147 (403)
T 3ot5_A 92 ---GQTL----AEITSRVMNGINEVIAAE----NPDIVLVHGDTTTSFAAGLAT-FYQQKMLGHVEA-G----------- 147 (403)
T ss_dssp ---CCCH----HHHHHHHHHHHHHHHHHH----CCSEEEEETTCHHHHHHHHHH-HHTTCEEEEESC-C-----------
T ss_pred ---CCCH----HHHHHHHHHHHHHHHHHc----CCCEEEEECCchhHHHHHHHH-HHhCCCEEEEEC-C-----------
Confidence 0111 223344566788888888 999999532 2333 34556 999999875421 0
Q ss_pred ccccccCccccccCcccccCCCCCCCCc-ccCCCcccCCCchHHHHHHHHHhhhcccceEEEcCchhhhHHHHHHHHccc
Q 042987 157 TLHKNTTKSFRELGSTLLNFPGFPPFPA-RDMALPMHDREGKVYKGLVDTGIQMAKSAGVIVNTFELLEERAIKAMLEGQ 235 (481)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~ 235 (481)
+....+ +.++ ....+... ..-.+.+++++-...+ .+...
T Consensus 148 ----------------------lrs~~~~~~~p-------~~~~r~~~-----~~~a~~~~~~se~~~~-----~l~~~- 187 (403)
T 3ot5_A 148 ----------------------LRTWNKYSPFP-------EEMNRQLT-----GVMADIHFSPTKQAKE-----NLLAE- 187 (403)
T ss_dssp ----------------------CCCSCTTSSTT-------HHHHHHHH-----HHHCSEEEESSHHHHH-----HHHHT-
T ss_pred ----------------------ccccccccCCc-------HHHHHHHH-----HHhcCEEECCCHHHHH-----HHHHc-
Confidence 000000 0000 00111111 1123445555433222 12222
Q ss_pred CCCCCCCCCeEEeCc-ccCCCCC-CCCCCCcchhhhhhcCCCCCcEEEEecCCCcCCCHHHHHHHHHHHHh-----CCCe
Q 042987 236 CTPGETSPPLYCIGP-VVGRGNG-ENRGRDRHECLSWLDSKPSRSVLFLCFGSLGSFSSKQLKEMAIGLER-----SGVK 308 (481)
Q Consensus 236 ~~~~~~~~~v~~vGp-l~~~~~~-~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~-----~~~~ 308 (481)
+-+..++.++|. ....... ..+ ....+..+.+ +++++++++.|...... +.+..++++++. .+.+
T Consensus 188 ---Gi~~~~i~vvGn~~~D~~~~~~~~-~~~~~~~~~l---~~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~ 259 (403)
T 3ot5_A 188 ---GKDPATIFVTGNTAIDALKTTVQK-DYHHPILENL---GDNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTE 259 (403)
T ss_dssp ---TCCGGGEEECCCHHHHHHHHHSCT-TCCCHHHHSC---TTCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEE
T ss_pred ---CCCcccEEEeCCchHHHHHhhhhh-hcchHHHHhc---cCCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCce
Confidence 111146889984 3221100 000 1111222223 34457777766432211 123445555443 3556
Q ss_pred EEEEEeCCCCCCccccccccccCchhhHhhh-cCCCeEeecccch---hhhhcccCcceeeeccCchhHHHhHhcCCcEE
Q 042987 309 FLWVVRAPAPDSIENRSSLESLLPEGFLDRT-KDRGLVVESWAPQ---VEVLNHESVGGFVTHCGWNSVLEGVCAGVPML 384 (481)
Q Consensus 309 ~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~~v~v~~~~p~---~~ll~~~~~~~~I~HgG~gt~~eal~~GvP~l 384 (481)
+|+..+.+ +. +-+.+.+.. ..+++.+.+++++ ..++..+++ +|+-.|..+ .||+++|+|+|
T Consensus 260 ~v~~~~~~--------~~----~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV 324 (403)
T 3ot5_A 260 LVYPMHLN--------PA----VREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVL 324 (403)
T ss_dssp EEEECCSC--------HH----HHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEE
T ss_pred EEEecCCC--------HH----HHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEE
Confidence 66654431 00 001111111 1357888888863 468889998 998875333 79999999999
Q ss_pred ecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHH
Q 042987 385 AWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEKGRAVKERAVAMKEAAAAAMRDGGSSRVA 464 (481)
Q Consensus 385 ~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~ 464 (481)
++|...+++. .+ +. |.|+.+.. +.++|.+++.++++|++ .+++..+- .+. ...++++.+.
T Consensus 325 ~~~~~~~~~e---~v-~~-g~~~lv~~--------d~~~l~~ai~~ll~~~~---~~~~m~~~---~~~-~g~~~aa~rI 384 (403)
T 3ot5_A 325 VLRDTTERPE---GI-EA-GTLKLIGT--------NKENLIKEALDLLDNKE---SHDKMAQA---ANP-YGDGFAANRI 384 (403)
T ss_dssp ECCSSCSCHH---HH-HH-TSEEECCS--------CHHHHHHHHHHHHHCHH---HHHHHHHS---CCT-TCCSCHHHHH
T ss_pred EecCCCcchh---he-eC-CcEEEcCC--------CHHHHHHHHHHHHcCHH---HHHHHHhh---cCc-ccCCcHHHHH
Confidence 9976666554 24 45 87776643 58999999999998876 44333221 111 1345666555
Q ss_pred HHHHHHHHH
Q 042987 465 LDNLVESFK 473 (481)
Q Consensus 465 ~~~~~~~~~ 473 (481)
++.+.+.+.
T Consensus 385 ~~~l~~~l~ 393 (403)
T 3ot5_A 385 LAAIKSHFE 393 (403)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhC
Confidence 665555443
No 26
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.31 E-value=2.2e-09 Score=106.85 Aligned_cols=356 Identities=12% Similarity=0.116 Sum_probs=178.6
Q ss_pred cEEEEEcC---C--------CccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCC
Q 042987 3 DTIVFYTS---P--------GRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPP 71 (481)
Q Consensus 3 ~~il~~~~---p--------~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 71 (481)
+||++++. | ..|+-.....|+++|.++| |+|++++........ . . .....++.++.++.
T Consensus 21 mkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~~-~----~---~~~~~~v~v~~~~~ 90 (438)
T 3c48_A 21 MRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQG--IEVDIYTRATRPSQG-E----I---VRVAENLRVINIAA 90 (438)
T ss_dssp CEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTT--CEEEEEEECCCGGGC-S----E---EEEETTEEEEEECC
T ss_pred heeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcC--CEEEEEecCCCCCCc-c----c---ccccCCeEEEEecC
Confidence 58999985 2 4688899999999999999 999999865431111 0 0 00124677777764
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHhhhHHHHHH-HHHhhccCCccEEEECCCCc--chHHhhhhhcCCceEEEeccchhh
Q 042987 72 PVSGLPDTLRSPADFPALVYELGELNNPKLHET-LITISKRSNLKAFVIDFFCN--PAFQVSSSTLSIPTYYYFTTAGSV 148 (481)
Q Consensus 72 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l-l~~~~~~~~pD~VI~D~~~~--~~~~~A~~~lgiP~v~~~~~~~~~ 148 (481)
... .... .......+..+ ...+... ++.. .+||+|++..... .+..++ +.+|+|+|.........
T Consensus 91 ~~~---~~~~-~~~~~~~~~~~----~~~~~~~~~~~~---~~~Div~~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~ 158 (438)
T 3c48_A 91 GPY---EGLS-KEELPTQLAAF----TGGMLSFTRREK---VTYDLIHSHYWLSGQVGWLLR-DLWRIPLIHTAHTLAAV 158 (438)
T ss_dssp SCS---SSCC-GGGGGGGHHHH----HHHHHHHHHHHT---CCCSEEEEEHHHHHHHHHHHH-HHHTCCEEEECSSCHHH
T ss_pred CCc---cccc-hhHHHHHHHHH----HHHHHHHHHhcc---CCCCEEEeCCccHHHHHHHHH-HHcCCCEEEEecCCccc
Confidence 311 0000 01111111111 1111112 2222 2499999774322 123355 78899998865432211
Q ss_pred HhhHhhhcccccccCccccccCcccccCCCCCCCCcccCCCcccCCCchHHHHHHHHHhhhcccceEEEcCchhhhHHHH
Q 042987 149 LAANLYLPTLHKNTTKSFRELGSTLLNFPGFPPFPARDMALPMHDREGKVYKGLVDTGIQMAKSAGVIVNTFELLEERAI 228 (481)
Q Consensus 149 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~ 228 (481)
.. . .+. .. .......... .........+.+++.+-...+.
T Consensus 159 ~~-----~---------------------~~~---~~-------~~~~~~~~~~-~~~~~~~~~d~ii~~s~~~~~~--- 198 (438)
T 3c48_A 159 KN-----S---------------------YRD---DS-------DTPESEARRI-CEQQLVDNADVLAVNTQEEMQD--- 198 (438)
T ss_dssp HS-----C---------------------C--------------CCHHHHHHHH-HHHHHHHHCSEEEESSHHHHHH---
T ss_pred cc-----c---------------------ccc---cc-------CCcchHHHHH-HHHHHHhcCCEEEEcCHHHHHH---
Confidence 00 0 000 00 0000001111 1122345677888877544332
Q ss_pred HHHHcccCCCCCCCCCeEEeCcccCCCCCCCC-CCCcchhhhhhcCCCCCcEEEEecCCCcC-CCHHHHHHHHHHHHhC-
Q 042987 229 KAMLEGQCTPGETSPPLYCIGPVVGRGNGENR-GRDRHECLSWLDSKPSRSVLFLCFGSLGS-FSSKQLKEMAIGLERS- 305 (481)
Q Consensus 229 ~~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~-~~~~~~l~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~~~~al~~~- 305 (481)
+...+ +-+..++..|...+....-... ......+.+-+.-. ++..+++..|+... ...+.+-..+..+.+.
T Consensus 199 --~~~~~---g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~ 272 (438)
T 3c48_A 199 --LMHHY---DADPDRISVVSPGADVELYSPGNDRATERSRRELGIP-LHTKVVAFVGRLQPFKGPQVLIKAVAALFDRD 272 (438)
T ss_dssp --HHHHH---CCCGGGEEECCCCCCTTTSCCC----CHHHHHHTTCC-SSSEEEEEESCBSGGGCHHHHHHHHHHHHHHC
T ss_pred --HHHHh---CCChhheEEecCCccccccCCcccchhhhhHHhcCCC-CCCcEEEEEeeecccCCHHHHHHHHHHHHhhC
Confidence 11111 1001356666643322110000 00001122222221 22366777788762 2334333333333322
Q ss_pred ---CCeEEEEEeCCCCCCccccccccccCchhhHh---hhc-CCCeEeecccchh---hhhcccCcceeeec----cCch
Q 042987 306 ---GVKFLWVVRAPAPDSIENRSSLESLLPEGFLD---RTK-DRGLVVESWAPQV---EVLNHESVGGFVTH----CGWN 371 (481)
Q Consensus 306 ---~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~---~~~-~~~v~v~~~~p~~---~ll~~~~~~~~I~H----gG~g 371 (481)
+..+ +.+|..... +...+.+.+ +.. .++|.+.+|+|+. .++..+++ +|.- |..+
T Consensus 273 p~~~~~l-~i~G~~~~~---------g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~ 340 (438)
T 3c48_A 273 PDRNLRV-IICGGPSGP---------NATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGL 340 (438)
T ss_dssp TTCSEEE-EEECCBC---------------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCH
T ss_pred CCcceEE-EEEeCCCCC---------CcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCch
Confidence 3343 344431000 001112221 221 4588888999864 58888998 7754 3356
Q ss_pred hHHHhHhcCCcEEecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCch-hHHHHHHHHHHHHH
Q 042987 372 SVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEK-GRAVKERAVAMKEA 450 (481)
Q Consensus 372 t~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~-~~~~~~~a~~l~~~ 450 (481)
++.||+++|+|+|+.+.. .....+ +.-+.|..++. -+.+++.++|.++++|++ .+.+.+++++..+.
T Consensus 341 ~~~Eama~G~PvI~~~~~----~~~e~i-~~~~~g~~~~~-------~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 408 (438)
T 3c48_A 341 VAMEAQASGTPVIAARVG----GLPIAV-AEGETGLLVDG-------HSPHAWADALATLLDDDETRIRMGEDAVEHART 408 (438)
T ss_dssp HHHHHHHTTCCEEEESCT----THHHHS-CBTTTEEEESS-------CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEecCCC----ChhHHh-hCCCcEEECCC-------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 899999999999997643 344445 34356777766 468999999999999876 45566666666555
No 27
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.30 E-value=1.1e-10 Score=114.04 Aligned_cols=130 Identities=16% Similarity=0.224 Sum_probs=84.3
Q ss_pred CcEEEEecCCCcCCCHHHHHHHHHHHHh-----CCCeEEEEEeCCCCCCccccccccccCchhhHhhhc-CCCeEeeccc
Q 042987 277 RSVLFLCFGSLGSFSSKQLKEMAIGLER-----SGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTK-DRGLVVESWA 350 (481)
Q Consensus 277 ~~~v~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~v~v~~~~ 350 (481)
+++|+++.|...... .+..++++++. .+..+++..+.+ . .+-+.+.+... .+++.+.+++
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~---------~---~~~~~l~~~~~~~~~v~~~g~~ 263 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN---------P---VVREAVFPVLKGVRNFVLLDPL 263 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC---------H---HHHHHHHHHHTTCTTEEEECCC
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC---------H---HHHHHHHHHhccCCCEEEECCC
Confidence 347778878654322 34455555543 245655544432 0 00111222211 2478888655
Q ss_pred ch---hhhhcccCcceeeeccCchhHHHhHhcCCcEEecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHH
Q 042987 351 PQ---VEVLNHESVGGFVTHCGWNSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQR 427 (481)
Q Consensus 351 p~---~~ll~~~~~~~~I~HgG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~ 427 (481)
++ ..++..+++ +|+++| |.+.||+++|+|+|+.+..+++... + +. |.|+.++ .+.++|.++
T Consensus 264 g~~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~---~-~~-g~g~lv~--------~d~~~la~~ 327 (376)
T 1v4v_A 264 EYGSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG---L-KA-GILKLAG--------TDPEGVYRV 327 (376)
T ss_dssp CHHHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH---H-HH-TSEEECC--------SCHHHHHHH
T ss_pred CHHHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh---h-cC-CceEECC--------CCHHHHHHH
Confidence 54 478999999 999884 4566999999999999877776652 3 44 8887764 268999999
Q ss_pred HHHHhcCch
Q 042987 428 VSELMDSEK 436 (481)
Q Consensus 428 i~~~l~~~~ 436 (481)
+.++++|++
T Consensus 328 i~~ll~d~~ 336 (376)
T 1v4v_A 328 VKGLLENPE 336 (376)
T ss_dssp HHHHHTCHH
T ss_pred HHHHHhChH
Confidence 999999876
No 28
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.28 E-value=1.2e-09 Score=106.95 Aligned_cols=350 Identities=13% Similarity=0.025 Sum_probs=188.9
Q ss_pred cEEEEEcC--C--CccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCCCCCCCC
Q 042987 3 DTIVFYTS--P--GRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPPVSGLPD 78 (481)
Q Consensus 3 ~~il~~~~--p--~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~l~~ 78 (481)
+||++++. + ..|.-.-...|++.| +| |+|++++...... ....+ ....++.+..++.... ++
T Consensus 5 mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g--~~v~v~~~~~~~~-------~~~~~-~~~~~~~~~~~~~~~~-~~- 70 (394)
T 3okp_A 5 RKTLVVTNDFPPRIGGIQSYLRDFIATQ--DP--ESIVVFASTQNAE-------EAHAY-DKTLDYEVIRWPRSVM-LP- 70 (394)
T ss_dssp CCEEEEESCCTTSCSHHHHHHHHHHTTS--CG--GGEEEEEECSSHH-------HHHHH-HTTCSSEEEEESSSSC-CS-
T ss_pred ceEEEEeCccCCccchHHHHHHHHHHHh--cC--CeEEEEECCCCcc-------chhhh-ccccceEEEEcccccc-cc-
Confidence 58999975 3 578888999999999 69 9999998764321 00111 1234677777764311 11
Q ss_pred CCCCCCCchHHHHHHHHhhhHHHHHHHHHhhccCCccEEEECCCCcc--hHHhhhhhcCCceEEEeccchhhHhhHhhhc
Q 042987 79 TLRSPADFPALVYELGELNNPKLHETLITISKRSNLKAFVIDFFCNP--AFQVSSSTLSIPTYYYFTTAGSVLAANLYLP 156 (481)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~pD~VI~D~~~~~--~~~~A~~~lgiP~v~~~~~~~~~~~~~~~~p 156 (481)
.. .....+.+++++. +||+|++...... ...++ +++|+|.+.+........
T Consensus 71 -------~~--------~~~~~l~~~~~~~----~~Dvv~~~~~~~~~~~~~~~-~~~~~~~~i~~~h~~~~~------- 123 (394)
T 3okp_A 71 -------TP--------TTAHAMAEIIRER----EIDNVWFGAAAPLALMAGTA-KQAGASKVIASTHGHEVG------- 123 (394)
T ss_dssp -------CH--------HHHHHHHHHHHHT----TCSEEEESSCTTGGGGHHHH-HHTTCSEEEEECCSTHHH-------
T ss_pred -------ch--------hhHHHHHHHHHhc----CCCEEEECCcchHHHHHHHH-HhcCCCcEEEEeccchhh-------
Confidence 11 1233455666666 9999997654433 33456 889998555333211000
Q ss_pred ccccccCccccccCcccccCCCCCCCCcccCCCcccCCCchHHHHHHHHHhhhcccceEEEcCchhhhHHHHHHHHcccC
Q 042987 157 TLHKNTTKSFRELGSTLLNFPGFPPFPARDMALPMHDREGKVYKGLVDTGIQMAKSAGVIVNTFELLEERAIKAMLEGQC 236 (481)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~ 236 (481)
........... .......+.++..+-...+. +...+.
T Consensus 124 ------------------------------------~~~~~~~~~~~--~~~~~~~d~ii~~s~~~~~~-----~~~~~~ 160 (394)
T 3okp_A 124 ------------------------------------WSMLPGSRQSL--RKIGTEVDVLTYISQYTLRR-----FKSAFG 160 (394)
T ss_dssp ------------------------------------HTTSHHHHHHH--HHHHHHCSEEEESCHHHHHH-----HHHHHC
T ss_pred ------------------------------------hhhcchhhHHH--HHHHHhCCEEEEcCHHHHHH-----HHHhcC
Confidence 00001111111 12345567788777543332 222110
Q ss_pred CCCCCCCCeEEeCcccCCCCCCC-CCCCcchhhhhhcCCCCCcEEEEecCCCc-CCCHHHHHHHHHHHHh--CCCeEEEE
Q 042987 237 TPGETSPPLYCIGPVVGRGNGEN-RGRDRHECLSWLDSKPSRSVLFLCFGSLG-SFSSKQLKEMAIGLER--SGVKFLWV 312 (481)
Q Consensus 237 ~~~~~~~~v~~vGpl~~~~~~~~-~~~~~~~l~~~l~~~~~~~~v~vs~GS~~-~~~~~~~~~~~~al~~--~~~~~i~~ 312 (481)
+. .++..+..-+....-.. .......+.+-+.-. ++..+++..|+.. ....+.+...+..+.+ .+..++++
T Consensus 161 -~~---~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~ 235 (394)
T 3okp_A 161 -SH---PTFEHLPSGVDVKRFTPATPEDKSATRKKLGFT-DTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIV 235 (394)
T ss_dssp -SS---SEEEECCCCBCTTTSCCCCHHHHHHHHHHTTCC-TTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred -CC---CCeEEecCCcCHHHcCCCCchhhHHHHHhcCCC-cCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEE
Confidence 01 45666664332211100 000112222223222 2225666678875 2234443333333333 25565544
Q ss_pred EeCCCCCCccccccccccCchhhHhhh--cCCCeEeecccchhh---hhcccCcceeee-----------ccCchhHHHh
Q 042987 313 VRAPAPDSIENRSSLESLLPEGFLDRT--KDRGLVVESWAPQVE---VLNHESVGGFVT-----------HCGWNSVLEG 376 (481)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~v~v~~~~p~~~---ll~~~~~~~~I~-----------HgG~gt~~ea 376 (481)
|.+. ..+.+.+.. ..+++.+.+|+|+.+ ++..+++ +|. -|..+++.||
T Consensus 236 -G~g~-------------~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea 299 (394)
T 3okp_A 236 -GSGR-------------YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEA 299 (394)
T ss_dssp -CCCT-------------THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHH
T ss_pred -cCch-------------HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHH
Confidence 4320 111111111 125788889997554 7888998 776 5556789999
Q ss_pred HhcCCcEEecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHH
Q 042987 377 VCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEK-GRAVKERAVAMKEAAAAAM 455 (481)
Q Consensus 377 l~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~-~~~~~~~a~~l~~~~~~~~ 455 (481)
+++|+|+|+.+..+ ....+ +. |.|..++. -+.+++.++|.++++|++ .+.+.+++++..+.
T Consensus 300 ~a~G~PvI~~~~~~----~~e~i-~~-~~g~~~~~-------~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~----- 361 (394)
T 3okp_A 300 QACGVPVIAGTSGG----APETV-TP-ATGLVVEG-------SDVDKLSELLIELLDDPIRRAAMGAAGRAHVEA----- 361 (394)
T ss_dssp HHTTCCEEECSSTT----GGGGC-CT-TTEEECCT-------TCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-----
T ss_pred HHcCCCEEEeCCCC----hHHHH-hc-CCceEeCC-------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH-----
Confidence 99999999977643 22333 34 57777766 369999999999999876 34455555444332
Q ss_pred hcCCChHHHHHHHHHHHHhccC
Q 042987 456 RDGGSSRVALDNLVESFKRGCI 477 (481)
Q Consensus 456 ~~~g~~~~~~~~~~~~~~~~~~ 477 (481)
.-+-....+.+.+.+.+..+
T Consensus 362 --~~s~~~~~~~~~~~~~~~~r 381 (394)
T 3okp_A 362 --EWSWEIMGERLTNILQSEPR 381 (394)
T ss_dssp --HTBHHHHHHHHHHHHHSCCC
T ss_pred --hCCHHHHHHHHHHHHHHhcc
Confidence 23444566666666665543
No 29
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.28 E-value=5.5e-11 Score=116.38 Aligned_cols=132 Identities=16% Similarity=0.198 Sum_probs=84.5
Q ss_pred CCcEEEEecCCCcCCCHHHHHHHHHHHHh-----CCCeEEEEEeCCCCCCccccccccccCchhhHhhhc-CCCeEeecc
Q 042987 276 SRSVLFLCFGSLGSFSSKQLKEMAIGLER-----SGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTK-DRGLVVESW 349 (481)
Q Consensus 276 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~v~v~~~ 349 (481)
++++++++.|...... ..+..++++++. .+..+++..+.. . .+-+.+.+... .+++.+.++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~---------~---~~~~~l~~~~~~~~~v~~~g~ 270 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLN---------P---NVREPVNRILGHVKNVILIDP 270 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBC---------H---HHHHHHHHHHTTCTTEEEECC
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCC---------H---HHHHHHHHHhhcCCCEEEeCC
Confidence 3457888888765432 234445555543 245555533321 0 01111222112 257888666
Q ss_pred cch---hhhhcccCcceeeeccCchhHHHhHhcCCcEEecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHH
Q 042987 350 APQ---VEVLNHESVGGFVTHCGWNSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQ 426 (481)
Q Consensus 350 ~p~---~~ll~~~~~~~~I~HgG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~ 426 (481)
+++ ..++..+++ +|+.+| +++.||+++|+|+|+.+..+++.. .+ +. |.|+.++. +.+++.+
T Consensus 271 ~~~~~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e---~v-~~-g~g~lv~~--------d~~~la~ 334 (384)
T 1vgv_A 271 QEYLPFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE---AV-TA-GTVRLVGT--------DKQRIVE 334 (384)
T ss_dssp CCHHHHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH---HH-HH-TSEEEECS--------SHHHHHH
T ss_pred CCHHHHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch---hh-hC-CceEEeCC--------CHHHHHH
Confidence 654 468999999 999985 458899999999999987554432 23 45 88887754 5899999
Q ss_pred HHHHHhcCch
Q 042987 427 RVSELMDSEK 436 (481)
Q Consensus 427 ~i~~~l~~~~ 436 (481)
+|.++++|++
T Consensus 335 ~i~~ll~d~~ 344 (384)
T 1vgv_A 335 EVTRLLKDEN 344 (384)
T ss_dssp HHHHHHHCHH
T ss_pred HHHHHHhChH
Confidence 9999999876
No 30
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.22 E-value=1.3e-10 Score=114.09 Aligned_cols=323 Identities=12% Similarity=0.065 Sum_probs=166.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCee-EEEcCCCCCCCCCCCC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVT-FHQLPPPVSGLPDTLR 81 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-f~~~~~~~~~l~~~~~ 81 (481)
++|++++ |+.....=+.+|.++|+++ |++++.++.+....+ ...+..+.+ ++. .+.+. +..
T Consensus 26 ~ki~~v~-Gtr~~~~~~a~li~~l~~~-~~~~~~~~~tG~h~~---~~~~~~~~~-----~i~~~~~l~-----~~~--- 87 (396)
T 3dzc_A 26 KKVLIVF-GTRPEAIKMAPLVQQLCQD-NRFVAKVCVTGQHRE---MLDQVLELF-----SITPDFDLN-----IME--- 87 (396)
T ss_dssp EEEEEEE-CSHHHHHHHHHHHHHHHHC-TTEEEEEEECCSSSH---HHHHHHHHT-----TCCCSEECC-----CCC---
T ss_pred CeEEEEE-eccHhHHHHHHHHHHHHhC-CCCcEEEEEecccHH---HHHHHHHhc-----CCCCceeee-----cCC---
Confidence 3777777 7777777788899999987 239997666553321 011122221 221 01111 100
Q ss_pred CCCCchHHHHHHHHhhhHHHHHHHHHhhccCCccEEEEC-C-CCcch-HHhhhhhcCCceEEEeccchhhHhhHhhhccc
Q 042987 82 SPADFPALVYELGELNNPKLHETLITISKRSNLKAFVID-F-FCNPA-FQVSSSTLSIPTYYYFTTAGSVLAANLYLPTL 158 (481)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~pD~VI~D-~-~~~~~-~~~A~~~lgiP~v~~~~~~~~~~~~~~~~p~~ 158 (481)
.... ....+......+.++++++ +||+|++- . .+.++ ..+| .++|||++.+.. +
T Consensus 88 ~~~~----~~~~~~~~~~~l~~~l~~~----kPDvVi~~g~~~~~~~~~~aa-~~~~IPv~h~~a-g------------- 144 (396)
T 3dzc_A 88 PGQT----LNGVTSKILLGMQQVLSSE----QPDVVLVHGDTATTFAASLAA-YYQQIPVGHVEA-G------------- 144 (396)
T ss_dssp TTCC----HHHHHHHHHHHHHHHHHHH----CCSEEEEETTSHHHHHHHHHH-HTTTCCEEEETC-C-------------
T ss_pred CCCC----HHHHHHHHHHHHHHHHHhc----CCCEEEEECCchhHHHHHHHH-HHhCCCEEEEEC-C-------------
Confidence 0011 2223344566788888888 99999953 2 23243 4455 999999775421 0
Q ss_pred ccccCccccccCcccccCCCCCCCCcccCCCcccCCCchHHHHHHHHHhhhcccceEEEcCchhhhHHHHHHHHcccCCC
Q 042987 159 HKNTTKSFRELGSTLLNFPGFPPFPARDMALPMHDREGKVYKGLVDTGIQMAKSAGVIVNTFELLEERAIKAMLEGQCTP 238 (481)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~ 238 (481)
+.. .... ..+.....+. ......+.+++++-..-+ .+...
T Consensus 145 --------------------~rs---~~~~-------~~~~~~~~r~-~~~~~a~~~~~~se~~~~-----~l~~~---- 184 (396)
T 3dzc_A 145 --------------------LRT---GNIY-------SPWPEEGNRK-LTAALTQYHFAPTDTSRA-----NLLQE---- 184 (396)
T ss_dssp --------------------CCC---SCTT-------SSTTHHHHHH-HHHHTCSEEEESSHHHHH-----HHHHT----
T ss_pred --------------------ccc---cccc-------cCCcHHHHHH-HHHHhcCEEECCCHHHHH-----HHHHc----
Confidence 000 0000 0000011110 011234556665533222 12221
Q ss_pred CCCCCCeEEeC-cccCCCCCCCCCC--C----cchhhhhhcC-CCCCcEEEEecCCCcCCCHHHHHHHHHHHHh-----C
Q 042987 239 GETSPPLYCIG-PVVGRGNGENRGR--D----RHECLSWLDS-KPSRSVLFLCFGSLGSFSSKQLKEMAIGLER-----S 305 (481)
Q Consensus 239 ~~~~~~v~~vG-pl~~~~~~~~~~~--~----~~~l~~~l~~-~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~-----~ 305 (481)
+-+..++.++| |......... .. . ..++.+-+.. .+++++|+++.+-..+... .+..+++|++. .
T Consensus 185 G~~~~ki~vvGn~~~d~~~~~~-~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~ 262 (396)
T 3dzc_A 185 NYNAENIFVTGNTVIDALLAVR-EKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGG-GFERICQALITTAEQHP 262 (396)
T ss_dssp TCCGGGEEECCCHHHHHHHHHH-HHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCT
T ss_pred CCCcCcEEEECCcHHHHHHHhh-hhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCC
Confidence 11114688899 4432110000 00 0 0222222321 1334577776532222222 24556666544 3
Q ss_pred CCeEEEEEeCCCCCCccccccccccCchhhHhhh-cCCCeEeecccc---hhhhhcccCcceeeeccCchhHHHhHhcCC
Q 042987 306 GVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRT-KDRGLVVESWAP---QVEVLNHESVGGFVTHCGWNSVLEGVCAGV 381 (481)
Q Consensus 306 ~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~~v~v~~~~p---~~~ll~~~~~~~~I~HgG~gt~~eal~~Gv 381 (481)
+.++|+.++.+ +. +-+.+.+.. ..+++.+.++++ ...++..+++ +|+-.| |.+.||+++|+
T Consensus 263 ~~~~v~~~g~~--------~~----~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~ 327 (396)
T 3dzc_A 263 ECQILYPVHLN--------PN----VREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGK 327 (396)
T ss_dssp TEEEEEECCBC--------HH----HHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTC
T ss_pred CceEEEEeCCC--------hH----HHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCC
Confidence 56666654421 00 011111111 135787877765 3468899999 999988 66689999999
Q ss_pred cEEecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCch
Q 042987 382 PMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEK 436 (481)
Q Consensus 382 P~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~ 436 (481)
|+|+..-..+++ ..+ +. |.++.+.. +.++|.+++.++++|++
T Consensus 328 PvV~~~~~~~~~---e~v-~~-G~~~lv~~--------d~~~l~~ai~~ll~d~~ 369 (396)
T 3dzc_A 328 PVLVMRETTERP---EAV-AA-GTVKLVGT--------NQQQICDALSLLLTDPQ 369 (396)
T ss_dssp CEEECCSSCSCH---HHH-HH-TSEEECTT--------CHHHHHHHHHHHHHCHH
T ss_pred CEEEccCCCcch---HHH-Hc-CceEEcCC--------CHHHHHHHHHHHHcCHH
Confidence 999986555553 234 45 87755432 58999999999998876
No 31
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.20 E-value=4.4e-08 Score=97.24 Aligned_cols=391 Identities=10% Similarity=0.055 Sum_probs=194.0
Q ss_pred CcEEEEEcCC-----CccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCc-------c--hhhhhccCCCCCeeEE
Q 042987 2 KDTIVFYTSP-----GRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGT-------D--DYIASVSATAPSVTFH 67 (481)
Q Consensus 2 ~~~il~~~~p-----~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~-------~--~~~~~~~~~~~~~~f~ 67 (481)
++||++++.. ..|--.-...|+++|+++| |+|+++++....... .. . ...........++.++
T Consensus 2 ~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 78 (439)
T 3fro_A 2 HMKVLLLGFEFLPVKVGGLAEALTAISEALASLG--HEVLVFTPSHGRFQG-EEIGKIRVFGEEVQVKVSYEERGNLRIY 78 (439)
T ss_dssp CCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTT--CEEEEEEECTTCSCC-EEEEEEEETTEEEEEEEEEEEETTEEEE
T ss_pred ceEEEEEecccCCcccCCHHHHHHHHHHHHHHCC--CeEEEEecCCCCchh-hhhccccccCcccceeeeeccCCCceEE
Confidence 3579999842 4555666889999999999 999999966443211 00 0 0000000022467777
Q ss_pred EcCCCCCCCCCCCCCCCCchHHHHHHHHhhhHHHHHHHHHhh-ccCCccEEEECCCCcc--hHHhhhhhcCCceEEEecc
Q 042987 68 QLPPPVSGLPDTLRSPADFPALVYELGELNNPKLHETLITIS-KRSNLKAFVIDFFCNP--AFQVSSSTLSIPTYYYFTT 144 (481)
Q Consensus 68 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~-~~~~pD~VI~D~~~~~--~~~~A~~~lgiP~v~~~~~ 144 (481)
.++.. . +... .........+..........+..+++... +..+||+|.+...... +..++ +..|+|+|.....
T Consensus 79 ~~~~~-~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~-~~~~~~~v~~~h~ 154 (439)
T 3fro_A 79 RIGGG-L-LDSE-DVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIK-KYFKIPAVFTIHR 154 (439)
T ss_dssp EEESG-G-GGCS-STTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHH-HHHCCCEEEEESC
T ss_pred Eecch-h-cccc-ccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHh-hccCCCEEEEecc
Confidence 76641 1 1110 00001112212222222333444444442 1349999997754332 33355 7789999886543
Q ss_pred chhhHhhHhhhcccccccCccccccCcccccCCCCCCCCcccCCCcccCCCchHHHHHHHHHhhhcccceEEEcCchhhh
Q 042987 145 AGSVLAANLYLPTLHKNTTKSFRELGSTLLNFPGFPPFPARDMALPMHDREGKVYKGLVDTGIQMAKSAGVIVNTFELLE 224 (481)
Q Consensus 145 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le 224 (481)
..... .+.. ......+ ..+... ...... .......+.++..|-...+
T Consensus 155 ~~~~~-----~~~~--------------~~~~~~~-----~~~~~~---~~~~~~------~~~~~~ad~ii~~S~~~~~ 201 (439)
T 3fro_A 155 LNKSK-----LPAF--------------YFHEAGL-----SELAPY---PDIDPE------HTGGYIADIVTTVSRGYLI 201 (439)
T ss_dssp CCCCC-----EEHH--------------HHHHTTC-----GGGCCS---SEECHH------HHHHHHCSEEEESCHHHHH
T ss_pred ccccc-----CchH--------------HhCcccc-----cccccc---ceeeHh------hhhhhhccEEEecCHHHHH
Confidence 32100 0000 0000000 000000 000111 1223456778877755444
Q ss_pred HHHHHHHHcccCCCCCCCCCeEEeCcccCCCC-CCCC-----CCCcchhhhhhcCCCCCcEEEEecCCCc--CCCHHHHH
Q 042987 225 ERAIKAMLEGQCTPGETSPPLYCIGPVVGRGN-GENR-----GRDRHECLSWLDSKPSRSVLFLCFGSLG--SFSSKQLK 296 (481)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~v~~vGpl~~~~~-~~~~-----~~~~~~l~~~l~~~~~~~~v~vs~GS~~--~~~~~~~~ 296 (481)
. ....+... . .++..|..-+.... .... ......+.+-+.-. ++ .+++..|+.. ....+.+-
T Consensus 202 ~-~~~~~~~~----~---~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~i~~~G~~~~~~Kg~~~li 271 (439)
T 3fro_A 202 D-EWGFFRNF----E---GKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMD-EG-VTFMFIGRFDRGQKGVDVLL 271 (439)
T ss_dssp H-THHHHGGG----T---TSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTCC-SC-EEEEEECCSSCTTBCHHHHH
T ss_pred H-Hhhhhhhc----C---CceeecCCCCCchhcCcccccchhhhhHHHHHHHcCCC-CC-cEEEEEcccccccccHHHHH
Confidence 3 11111111 1 45666653332111 0000 00112222223322 33 6777788876 23455555
Q ss_pred HHHHHHHh----CCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhh---hhcccCcceeeec--
Q 042987 297 EMAIGLER----SGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVE---VLNHESVGGFVTH-- 367 (481)
Q Consensus 297 ~~~~al~~----~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~---ll~~~~~~~~I~H-- 367 (481)
..+..+.+ .+.+++ .+|.+. ......+ ..+.++.. +++.+.+|+++.+ ++..+++ +|.-
T Consensus 272 ~a~~~l~~~~~~~~~~l~-i~G~g~-------~~~~~~l-~~~~~~~~-~~~~~~g~~~~~~~~~~~~~adv--~v~ps~ 339 (439)
T 3fro_A 272 KAIEILSSKKEFQEMRFI-IIGKGD-------PELEGWA-RSLEEKHG-NVKVITEMLSREFVRELYGSVDF--VIIPSY 339 (439)
T ss_dssp HHHHHHHTSGGGGGEEEE-EECCCC-------HHHHHHH-HHHHHHCT-TEEEECSCCCHHHHHHHHTTCSE--EEECBS
T ss_pred HHHHHHHhcccCCCeEEE-EEcCCC-------hhHHHHH-HHHHhhcC-CEEEEcCCCCHHHHHHHHHHCCE--EEeCCC
Confidence 55555544 344443 344320 0000001 11122222 4556678898754 7888888 7743
Q ss_pred --cCchhHHHhHhcCCcEEecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhc-Cch-hHHHHHH
Q 042987 368 --CGWNSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMD-SEK-GRAVKER 443 (481)
Q Consensus 368 --gG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~-~~~-~~~~~~~ 443 (481)
|-.+++.||+++|+|+|+... ......+ +. |.|..++. -+.+++.++|.++++ |++ .+.+.++
T Consensus 340 ~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~-~~-~~g~~~~~-------~d~~~la~~i~~ll~~~~~~~~~~~~~ 406 (439)
T 3fro_A 340 FEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKA-------GDPGELANAILKALELSRSDLSKFREN 406 (439)
T ss_dssp CCSSCHHHHHHHHTTCEEEEESS----THHHHHC-CT-TTCEEECT-------TCHHHHHHHHHHHHHHTTTTTHHHHHH
T ss_pred CCCccHHHHHHHHCCCCeEEcCC----CCcceeE-Ec-CceEEeCC-------CCHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 334689999999999999754 3344455 45 78888877 469999999999998 765 4556666
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 042987 444 AVAMKEAAAAAMRDGGSSRVALDNLVESFKRG 475 (481)
Q Consensus 444 a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 475 (481)
+++..+ .-+-....+.+++.+.+.
T Consensus 407 ~~~~~~--------~~s~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 407 CKKRAM--------SFSWEKSAERYVKAYTGS 430 (439)
T ss_dssp HHHHHH--------TSCHHHHHHHHHHHHHTC
T ss_pred HHHHHh--------hCcHHHHHHHHHHHHHHH
Confidence 555543 344445566666655554
No 32
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.16 E-value=1.1e-07 Score=93.10 Aligned_cols=355 Identities=15% Similarity=0.119 Sum_probs=178.9
Q ss_pred CCcEEEEEcCCCc-cCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCCCCCCCCC
Q 042987 1 MKDTIVFYTSPGR-GHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPPVSGLPDT 79 (481)
Q Consensus 1 m~~~il~~~~p~~-GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~l~~~ 79 (481)
|++.+....+|.. |.-.-...|+++|+++| |+|++++....... .....++.+..++... .+.
T Consensus 14 ~~~~~~~~~~p~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~-----------~~~~~~i~~~~~~~~~--~~~- 77 (394)
T 2jjm_A 14 MKLKIGITCYPSVGGSGVVGTELGKQLAERG--HEIHFITSGLPFRL-----------NKVYPNIYFHEVTVNQ--YSV- 77 (394)
T ss_dssp -CCEEEEECCC--CHHHHHHHHHHHHHHHTT--CEEEEECSSCC---------------CCCTTEEEECCCCC-------
T ss_pred heeeeehhcCCCCCCHHHHHHHHHHHHHhCC--CEEEEEeCCCCCcc-----------cccCCceEEEeccccc--ccc-
Confidence 5667888888754 55667789999999999 99999986532110 0123466666665321 110
Q ss_pred CCCCCCchHHHHHHHHhhhHHHHHHHHHhhccCCccEEEECCCCcc--hHHhhhhhc--CCceEEEeccchhhHhhHhhh
Q 042987 80 LRSPADFPALVYELGELNNPKLHETLITISKRSNLKAFVIDFFCNP--AFQVSSSTL--SIPTYYYFTTAGSVLAANLYL 155 (481)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~pD~VI~D~~~~~--~~~~A~~~l--giP~v~~~~~~~~~~~~~~~~ 155 (481)
. ......+ .....+.+++++. +||+|++...... ...++...+ ++|+|.........
T Consensus 78 -~--~~~~~~~-----~~~~~l~~~l~~~----~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~------- 138 (394)
T 2jjm_A 78 -F--QYPPYDL-----ALASKMAEVAQRE----NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT------- 138 (394)
T ss_dssp -C--CSCCHHH-----HHHHHHHHHHHHH----TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH-------
T ss_pred -c--ccccccH-----HHHHHHHHHHHHc----CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc-------
Confidence 0 0111111 1223455666666 9999998743332 233441333 59988754322110
Q ss_pred cccccccCccccccCcccccCCCCCCCCcccCCCcccCCCchHHHHHHHHHhhhcccceEEEcCchhhhHHHHHHHHccc
Q 042987 156 PTLHKNTTKSFRELGSTLLNFPGFPPFPARDMALPMHDREGKVYKGLVDTGIQMAKSAGVIVNTFELLEERAIKAMLEGQ 235 (481)
Q Consensus 156 p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~ 235 (481)
..+.. .....+. .......+.++..+....+. +...+
T Consensus 139 --------------------~~~~~----------------~~~~~~~--~~~~~~ad~ii~~s~~~~~~-----~~~~~ 175 (394)
T 2jjm_A 139 --------------------VLGSD----------------PSLNNLI--RFGIEQSDVVTAVSHSLINE-----THELV 175 (394)
T ss_dssp --------------------TTTTC----------------TTTHHHH--HHHHHHSSEEEESCHHHHHH-----HHHHT
T ss_pred --------------------ccCCC----------------HHHHHHH--HHHHhhCCEEEECCHHHHHH-----HHHhh
Confidence 00000 0000111 12234567787776543332 22221
Q ss_pred CCCCCCCCCeEEeCcccCCCCCCCCCCCcchhhhhhcCCCCCcEEEEecCCCc-CCCHHHHHHHHHHHHh-CCCeEEEEE
Q 042987 236 CTPGETSPPLYCIGPVVGRGNGENRGRDRHECLSWLDSKPSRSVLFLCFGSLG-SFSSKQLKEMAIGLER-SGVKFLWVV 313 (481)
Q Consensus 236 ~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~-~~~~~~~~~~~~al~~-~~~~~i~~~ 313 (481)
.. ..++..+...+....-.. .....+.+-+... ++..+++..|... ....+.+-..+..+.+ .+..++ .+
T Consensus 176 ~~----~~~~~vi~ngv~~~~~~~--~~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~-i~ 247 (394)
T 2jjm_A 176 KP----NKDIQTVYNFIDERVYFK--RDMTQLKKEYGIS-ESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLL-LV 247 (394)
T ss_dssp CC----SSCEEECCCCCCTTTCCC--CCCHHHHHHTTCC----CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEE-EE
T ss_pred CC----cccEEEecCCccHHhcCC--cchHHHHHHcCCC-CCCeEEEEeeccccccCHHHHHHHHHHHHhhCCCEEE-EE
Confidence 00 146666664332211100 1112222222211 1225556668875 2233333333333333 345544 44
Q ss_pred eCCCCCCccccccccccCchhhHhhhc----CCCeEeecccch-hhhhcccCcceee----eccCchhHHHhHhcCCcEE
Q 042987 314 RAPAPDSIENRSSLESLLPEGFLDRTK----DRGLVVESWAPQ-VEVLNHESVGGFV----THCGWNSVLEGVCAGVPML 384 (481)
Q Consensus 314 ~~~~~~~~~~~~~~~~~lp~~~~~~~~----~~~v~v~~~~p~-~~ll~~~~~~~~I----~HgG~gt~~eal~~GvP~l 384 (481)
|.+. ..+.+.+... .++|.+.++..+ ..++..+++ +| .-|..+++.||+++|+|+|
T Consensus 248 G~g~-------------~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI 312 (394)
T 2jjm_A 248 GDGP-------------EFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCI 312 (394)
T ss_dssp CCCT-------------THHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEE
T ss_pred CCch-------------HHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEE
Confidence 4320 1111221111 246666676543 468999998 77 4566778999999999999
Q ss_pred ecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHHhcCCChHH
Q 042987 385 AWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEK-GRAVKERAVAMKEAAAAAMRDGGSSRV 463 (481)
Q Consensus 385 ~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~ 463 (481)
+.+..+ ....+ +.-+.|..++. -+.+++.++|.++++|++ .+.+.+++++..+ +.-+-..
T Consensus 313 ~~~~~~----~~e~v-~~~~~g~~~~~-------~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~-------~~~s~~~ 373 (394)
T 2jjm_A 313 GTRVGG----IPEVI-QHGDTGYLCEV-------GDTTGVADQAIQLLKDEELHRNMGERARESVY-------EQFRSEK 373 (394)
T ss_dssp EECCTT----STTTC-CBTTTEEEECT-------TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH-------HHSCHHH
T ss_pred EecCCC----hHHHh-hcCCceEEeCC-------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH-------HhCCHHH
Confidence 987632 22223 33256777766 368999999999999876 3445555544432 1233334
Q ss_pred HHHHHHHHHHhc
Q 042987 464 ALDNLVESFKRG 475 (481)
Q Consensus 464 ~~~~~~~~~~~~ 475 (481)
..+.+++.+.+.
T Consensus 374 ~~~~~~~~~~~~ 385 (394)
T 2jjm_A 374 IVSQYETIYYDV 385 (394)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 455555554443
No 33
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.09 E-value=9.1e-08 Score=93.95 Aligned_cols=93 Identities=15% Similarity=0.205 Sum_probs=67.5
Q ss_pred CCCeEeecccchh---hhhcccCcceeeec----cCc-hhHHHhHhcCCcEEecccccchhHHHHHHHHHhceeeEeecC
Q 042987 341 DRGLVVESWAPQV---EVLNHESVGGFVTH----CGW-NSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRS 412 (481)
Q Consensus 341 ~~~v~v~~~~p~~---~ll~~~~~~~~I~H----gG~-gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 412 (481)
.+++.+.+++++. .++..+++ +|.- .|. +++.||+++|+|+|+.+. ......+ +.-+.|...+.
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i-~~~~~g~~~~~- 333 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVL-ADGDAGRLVPV- 333 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHH-TTTTSSEECCT-
T ss_pred cCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHh-cCCCceEEeCC-
Confidence 4578888999875 68999999 6643 343 489999999999999865 4455556 44367777766
Q ss_pred CccCcccCHHHHHHHHHHHhcCch-hHHHHHHHHHH
Q 042987 413 EEKDRLVSAAELEQRVSELMDSEK-GRAVKERAVAM 447 (481)
Q Consensus 413 ~~~~~~~~~~~l~~~i~~~l~~~~-~~~~~~~a~~l 447 (481)
-+.+++.++|.++++|++ .+.+.+++++.
T Consensus 334 ------~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~ 363 (406)
T 2gek_A 334 ------DDADGMAAALIGILEDDQLRAGYVARASER 363 (406)
T ss_dssp ------TCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred ------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 368999999999998876 23344444433
No 34
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.07 E-value=2.7e-08 Score=100.84 Aligned_cols=95 Identities=16% Similarity=0.104 Sum_probs=67.4
Q ss_pred CCCeEeecccchh---hhhccc----Ccceeeec----cCchhHHHhHhcCCcEEecccccchhHHHHHHHHHhceeeEe
Q 042987 341 DRGLVVESWAPQV---EVLNHE----SVGGFVTH----CGWNSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAV 409 (481)
Q Consensus 341 ~~~v~v~~~~p~~---~ll~~~----~~~~~I~H----gG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l 409 (481)
.++|.+.+++|+. .++..+ ++ +|.- |-..++.||+++|+|+|+.... .....+ +.-..|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~----g~~e~v-~~~~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRNG----GPAEIL-DGGKYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESSB----HHHHHT-GGGTSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecCC----CHHHHh-cCCceEEEe
Confidence 3578888999764 478888 88 7743 3345889999999999998642 344445 442478888
Q ss_pred ecCCccCcccCHHHHHHHHHHHhcCch-hHHHHHHHHHHHH
Q 042987 410 TRSEEKDRLVSAAELEQRVSELMDSEK-GRAVKERAVAMKE 449 (481)
Q Consensus 410 ~~~~~~~~~~~~~~l~~~i~~~l~~~~-~~~~~~~a~~l~~ 449 (481)
+. -+.+++.++|.++++|++ .+.+.+++++..+
T Consensus 407 ~~-------~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~ 440 (499)
T 2r60_A 407 DP-------EDPEDIARGLLKAFESEETWSAYQEKGKQRVE 440 (499)
T ss_dssp CT-------TCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CC-------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 76 368999999999999876 3445555554433
No 35
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.07 E-value=2e-08 Score=97.54 Aligned_cols=144 Identities=17% Similarity=0.195 Sum_probs=91.7
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhC------CCeEEEEEeCCCCCCccccccccccCchhhHhhhc-CCCeEeecccc
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERS------GVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTK-DRGLVVESWAP 351 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~------~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~v~v~~~~p 351 (481)
.+++..|+... ...+..++++++.. +.. ++.+|.+. ...+ ..+..+.. .+++.+.++..
T Consensus 197 ~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~-l~i~G~g~----------~~~~-~~~~~~~~~~~~v~~~g~~~ 262 (374)
T 2iw1_A 197 NLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTL-LFVVGQDK----------PRKF-EALAEKLGVRSNVHFFSGRN 262 (374)
T ss_dssp EEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEE-EEEESSSC----------CHHH-HHHHHHHTCGGGEEEESCCS
T ss_pred eEEEEeccchh--hcCHHHHHHHHHHhHhccCCceE-EEEEcCCC----------HHHH-HHHHHHcCCCCcEEECCCcc
Confidence 66777787652 23455666777654 233 34455421 0001 11111111 35787878765
Q ss_pred h-hhhhcccCcceeee----ccCchhHHHhHhcCCcEEecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHH
Q 042987 352 Q-VEVLNHESVGGFVT----HCGWNSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQ 426 (481)
Q Consensus 352 ~-~~ll~~~~~~~~I~----HgG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~ 426 (481)
+ ..++..+++ +|. -|..+++.||+++|+|+|+.... .+...+. .-+.|..++.. -+.+++.+
T Consensus 263 ~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~-~~~~g~~~~~~------~~~~~l~~ 329 (374)
T 2iw1_A 263 DVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYIA-DANCGTVIAEP------FSQEQLNE 329 (374)
T ss_dssp CHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHHH-HHTCEEEECSS------CCHHHHHH
T ss_pred cHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecCC----Cchhhhc-cCCceEEeCCC------CCHHHHHH
Confidence 4 458999998 775 46678899999999999998763 3445563 44788888722 36999999
Q ss_pred HHHHHhcCch-hHHHHHHHHHHHH
Q 042987 427 RVSELMDSEK-GRAVKERAVAMKE 449 (481)
Q Consensus 427 ~i~~~l~~~~-~~~~~~~a~~l~~ 449 (481)
+|.++++|++ .+.+.+++++..+
T Consensus 330 ~i~~l~~~~~~~~~~~~~~~~~~~ 353 (374)
T 2iw1_A 330 VLRKALTQSPLRMAWAENARHYAD 353 (374)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcChHHHHHHHHHHHHHHH
Confidence 9999999876 3455555555544
No 36
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.02 E-value=1.8e-09 Score=105.22 Aligned_cols=349 Identities=11% Similarity=0.028 Sum_probs=178.3
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCCCCCCCCCCCCCC
Q 042987 5 IVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPPVSGLPDTLRSPA 84 (481)
Q Consensus 5 il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~l~~~~~~~~ 84 (481)
+++ -+|++-...-+-+|.++|.++ +++.++.+..+.. ....... ..++. ++.++..+..+ . .
T Consensus 12 ~~~-v~GtRpe~~k~~p~~~~l~~~---~~~~~~~tgqh~~------~~~~~~~--~~~~~---i~~~~~~l~~~--~-~ 73 (385)
T 4hwg_A 12 VMT-IVGTRPELIKLCCVISEFDKH---TKHILVHTGQNYA------YELNQVF--FDDMG---IRKPDYFLEVA--A-D 73 (385)
T ss_dssp EEE-EECSHHHHHHHHHHHHHHHHH---SEEEEEECSCHHH------HHHTHHH--HC-CC---CCCCSEECCCC--C-C
T ss_pred eeE-EEEcCHhHHHHHHHHHHHHhc---CCEEEEEeCCCCC------hhHHHHH--HhhCC---CCCCceecCCC--C-C
Confidence 444 448888888888899999865 5655555443211 0111100 00111 22111102211 1 1
Q ss_pred CchHHHHHHHHhhhHHHHHHHHHhhccCCccEEEE--CCCCcchHHhhhhhcCCceEEEeccchhhHhhHhhhccccccc
Q 042987 85 DFPALVYELGELNNPKLHETLITISKRSNLKAFVI--DFFCNPAFQVSSSTLSIPTYYYFTTAGSVLAANLYLPTLHKNT 162 (481)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~~pD~VI~--D~~~~~~~~~A~~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 162 (481)
.. ...+......+.+++++. +||+||+ |..+.+++.+| .++|||++.+.. +
T Consensus 74 ~~----~~~~~~~~~~l~~~l~~~----kPD~Vlv~gd~~~~~aalaA-~~~~IPv~h~ea-g----------------- 126 (385)
T 4hwg_A 74 NT----AKSIGLVIEKVDEVLEKE----KPDAVLFYGDTNSCLSAIAA-KRRKIPIFHMEA-G----------------- 126 (385)
T ss_dssp CS----HHHHHHHHHHHHHHHHHH----CCSEEEEESCSGGGGGHHHH-HHTTCCEEEESC-C-----------------
T ss_pred CH----HHHHHHHHHHHHHHHHhc----CCcEEEEECCchHHHHHHHH-HHhCCCEEEEeC-C-----------------
Confidence 22 334445677788888888 9999985 33445565566 999999765421 0
Q ss_pred CccccccCcccccCCCCCCCCcccCCCcccCCCchHHHHHHHHHhhhcccceEEEcCchhhhHHHHHHHHcccCCCCCCC
Q 042987 163 TKSFRELGSTLLNFPGFPPFPARDMALPMHDREGKVYKGLVDTGIQMAKSAGVIVNTFELLEERAIKAMLEGQCTPGETS 242 (481)
Q Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~ 242 (481)
+.... ..+| ....+... ..-.+.++.++...-+ .+... +-+.
T Consensus 127 ----------------lrs~~-~~~p-------ee~nR~~~-----~~~a~~~~~~te~~~~-----~l~~~----G~~~ 168 (385)
T 4hwg_A 127 ----------------NRCFD-QRVP-------EEINRKII-----DHISDVNITLTEHARR-----YLIAE----GLPA 168 (385)
T ss_dssp ----------------CCCSC-TTST-------HHHHHHHH-----HHHCSEEEESSHHHHH-----HHHHT----TCCG
T ss_pred ----------------Ccccc-ccCc-------HHHHHHHH-----HhhhceeecCCHHHHH-----HHHHc----CCCc
Confidence 00000 0000 00111111 1123445554433222 12221 1111
Q ss_pred CCeEEeC-cccCCCCCCCCCCCcchhhhhhcCCCCCcEEEEecCCCcCCCH-HHHHHHHHHHHhC----CCeEEEEEeCC
Q 042987 243 PPLYCIG-PVVGRGNGENRGRDRHECLSWLDSKPSRSVLFLCFGSLGSFSS-KQLKEMAIGLERS----GVKFLWVVRAP 316 (481)
Q Consensus 243 ~~v~~vG-pl~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~-~~~~~~~~al~~~----~~~~i~~~~~~ 316 (481)
.++.++| |...............++.+-+.-.+ ++.|+++.|....... +.+..+++++.+. +..+|+.....
T Consensus 169 ~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~ 247 (385)
T 4hwg_A 169 ELTFKSGSHMPEVLDRFMPKILKSDILDKLSLTP-KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR 247 (385)
T ss_dssp GGEEECCCSHHHHHHHHHHHHHHCCHHHHTTCCT-TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH
T ss_pred CcEEEECCchHHHHHHhhhhcchhHHHHHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH
Confidence 4688899 43321100000001122333333222 4488888887654332 4466677776543 66777755321
Q ss_pred CCCCccccccccccCchhhHhh---hc-CCCeEeecccc---hhhhhcccCcceeeeccCchhHHHhHhcCCcEEecccc
Q 042987 317 APDSIENRSSLESLLPEGFLDR---TK-DRGLVVESWAP---QVEVLNHESVGGFVTHCGWNSVLEGVCAGVPMLAWPLY 389 (481)
Q Consensus 317 ~~~~~~~~~~~~~~lp~~~~~~---~~-~~~v~v~~~~p---~~~ll~~~~~~~~I~HgG~gt~~eal~~GvP~l~~P~~ 389 (481)
+.+.+.+. .. ..++.+.+.++ ...++.++++ +|+-.|. .+.||.++|+|+|+++..
T Consensus 248 --------------~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ 310 (385)
T 4hwg_A 248 --------------TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREA 310 (385)
T ss_dssp --------------HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSS
T ss_pred --------------HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCC
Confidence 00111111 11 24676666554 4568999999 9999886 469999999999999876
Q ss_pred cchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHH-hcCCChHHHHHH
Q 042987 390 AEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEK-GRAVKERAVAMKEAAAAAM-RDGGSSRVALDN 467 (481)
Q Consensus 390 ~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~-~~~~~~~a~~l~~~~~~~~-~~~g~~~~~~~~ 467 (481)
.+.+. .+ +. |.++.+. .+.++|.+++.++++|+. .+.|++++.. . .+++++.+.++.
T Consensus 311 ter~e---~v-~~-G~~~lv~--------~d~~~i~~ai~~ll~d~~~~~~m~~~~~~--------~~g~g~aa~rI~~~ 369 (385)
T 4hwg_A 311 HERPE---GM-DA-GTLIMSG--------FKAERVLQAVKTITEEHDNNKRTQGLVPD--------YNEAGLVSKKILRI 369 (385)
T ss_dssp CSCTH---HH-HH-TCCEECC--------SSHHHHHHHHHHHHTTCBTTBCCSCCCHH--------HHTCCCHHHHHHHH
T ss_pred ccchh---hh-hc-CceEEcC--------CCHHHHHHHHHHHHhChHHHHHhhccCCC--------CCCCChHHHHHHHH
Confidence 54222 24 45 8776653 368999999999998875 1122222222 2 346666666666
Q ss_pred HHHHHHhc
Q 042987 468 LVESFKRG 475 (481)
Q Consensus 468 ~~~~~~~~ 475 (481)
|.+.+...
T Consensus 370 l~~~~~~~ 377 (385)
T 4hwg_A 370 VLSYVDYI 377 (385)
T ss_dssp HHHHHHHH
T ss_pred HHHHhhhc
Confidence 65554433
No 37
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.98 E-value=6e-09 Score=101.41 Aligned_cols=79 Identities=15% Similarity=0.114 Sum_probs=60.1
Q ss_pred CCeEeecccch---hhhhcccCcceeeeccCchhHHHhHhcCCcEEecccccchhHHHHHHHHHhceeeEeecCCccCcc
Q 042987 342 RGLVVESWAPQ---VEVLNHESVGGFVTHCGWNSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRL 418 (481)
Q Consensus 342 ~~v~v~~~~p~---~~ll~~~~~~~~I~HgG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~ 418 (481)
+++.+.+++++ ..++..+++ +|+.+| +++.||+++|+|+|+....+... ..+ +. |.|..++.
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~---e~v-~~-g~g~~v~~------- 327 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP---EGI-EA-GTLKLAGT------- 327 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH---HHH-HT-TSEEECCS-------
T ss_pred CCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc---eee-cC-CceEEcCC-------
Confidence 58888777764 468888998 998874 56889999999999986433332 234 45 88877653
Q ss_pred cCHHHHHHHHHHHhcCch
Q 042987 419 VSAAELEQRVSELMDSEK 436 (481)
Q Consensus 419 ~~~~~l~~~i~~~l~~~~ 436 (481)
+.+++.++|.++++|++
T Consensus 328 -d~~~la~~i~~ll~~~~ 344 (375)
T 3beo_A 328 -DEETIFSLADELLSDKE 344 (375)
T ss_dssp -CHHHHHHHHHHHHHCHH
T ss_pred -CHHHHHHHHHHHHhChH
Confidence 57999999999998876
No 38
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.94 E-value=1.2e-07 Score=90.96 Aligned_cols=125 Identities=14% Similarity=0.127 Sum_probs=79.5
Q ss_pred EEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchh---hhh
Q 042987 280 LFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQV---EVL 356 (481)
Q Consensus 280 v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~---~ll 356 (481)
+++..|++. ....+..++++++..+.+++++ |.+. . ...+ ..+..+.. +++.+.+|+++. .++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~-G~g~-~--------~~~l-~~~~~~~~-~~v~~~g~~~~~~l~~~~ 229 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLA-GPAW-E--------PEYF-DEITRRYG-STVEPIGEVGGERRLDLL 229 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE-SCCC-C--------HHHH-HHHHHHHT-TTEEECCCCCHHHHHHHH
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEE-eCcc-c--------HHHH-HHHHHHhC-CCEEEeccCCHHHHHHHH
Confidence 344457765 3344666777777777776554 4320 0 0001 11222233 689899999975 689
Q ss_pred cccCcceeeec-------------cC-chhHHHhHhcCCcEEecccccchhHHHHHHHHH--hceeeEeecCCccCcccC
Q 042987 357 NHESVGGFVTH-------------CG-WNSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEE--MKVGLAVTRSEEKDRLVS 420 (481)
Q Consensus 357 ~~~~~~~~I~H-------------gG-~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~--~G~G~~l~~~~~~~~~~~ 420 (481)
..+++ +|.- -| .+++.||+++|+|+|+.... .+...+ +. -+.|...+. +
T Consensus 230 ~~adv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~-~~~~~~~g~~~~~--------d 294 (342)
T 2iuy_A 230 ASAHA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIV-PSVGEVVGYGTDF--------A 294 (342)
T ss_dssp HHCSE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHG-GGGEEECCSSSCC--------C
T ss_pred HhCCE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHh-cccCCCceEEcCC--------C
Confidence 99999 6632 23 45799999999999998763 244444 33 245655544 4
Q ss_pred HHHHHHHHHHHhc
Q 042987 421 AAELEQRVSELMD 433 (481)
Q Consensus 421 ~~~l~~~i~~~l~ 433 (481)
.+++.++|.++++
T Consensus 295 ~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 295 PDEARRTLAGLPA 307 (342)
T ss_dssp HHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHH
Confidence 8899999999986
No 39
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.82 E-value=3.8e-06 Score=82.71 Aligned_cols=111 Identities=14% Similarity=0.120 Sum_probs=72.7
Q ss_pred CCCeEeecccc---h---hhhhcccCcceeeecc----CchhHHHhHhcCCcEEecccccchhHHHHHHHHHhceeeEee
Q 042987 341 DRGLVVESWAP---Q---VEVLNHESVGGFVTHC----GWNSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVT 410 (481)
Q Consensus 341 ~~~v~v~~~~p---~---~~ll~~~~~~~~I~Hg----G~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~ 410 (481)
.++|.+.+|++ + ..++..+++ +|.-. ..+++.||+++|+|+|+.+. ..+...+ +.-+.|..++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEEC
Confidence 35888888775 2 357888998 77654 45689999999999999765 3344455 3425677664
Q ss_pred cCCccCcccCHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042987 411 RSEEKDRLVSAAELEQRVSELMDSEK-GRAVKERAVAMKEAAAAAMRDGGSSRVALDNLVESFKR 474 (481)
Q Consensus 411 ~~~~~~~~~~~~~l~~~i~~~l~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 474 (481)
+ .+++.++|.++++|++ .+.+.+++++..+ +.-+.....+.+++.+.+
T Consensus 365 --d-------~~~la~~i~~ll~~~~~~~~~~~~a~~~~~-------~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 365 --D-------ANEAVEVVLYLLKHPEVSKEMGAKAKERVR-------KNFIITKHMERYLDILNS 413 (416)
T ss_dssp --S-------HHHHHHHHHHHHHCHHHHHHHHHHHHHHHH-------HHTBHHHHHHHHHHHHHT
T ss_pred --C-------HHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-------HHcCHHHHHHHHHHHHHH
Confidence 3 7899999999998876 2344444444332 123333455566555544
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.75 E-value=1e-06 Score=93.20 Aligned_cols=93 Identities=12% Similarity=0.121 Sum_probs=60.2
Q ss_pred CCeEeec----ccchhhhhc----ccCcceeeec----cCchhHHHhHhcCCcEEecccccchhHHHHHHHHHhceeeEe
Q 042987 342 RGLVVES----WAPQVEVLN----HESVGGFVTH----CGWNSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAV 409 (481)
Q Consensus 342 ~~v~v~~----~~p~~~ll~----~~~~~~~I~H----gG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l 409 (481)
++|.+.+ ++++.++.. .+++ +|.- |-..++.||+++|+|+|+... ......+ +.-..|..+
T Consensus 640 ~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd~----GG~~EiV-~dg~~Gllv 712 (816)
T 3s28_A 640 GQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEII-VHGKSGFHI 712 (816)
T ss_dssp BBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEESS----BTHHHHC-CBTTTBEEE
T ss_pred CcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeCC----CChHHHH-ccCCcEEEe
Confidence 5677777 444555544 4566 7743 345689999999999999643 3344444 343578888
Q ss_pred ecCCccCcccCHHHHHHHHHHHh----cCch-hHHHHHHHHHHH
Q 042987 410 TRSEEKDRLVSAAELEQRVSELM----DSEK-GRAVKERAVAMK 448 (481)
Q Consensus 410 ~~~~~~~~~~~~~~l~~~i~~~l----~~~~-~~~~~~~a~~l~ 448 (481)
+. -+.+++.++|.+++ .|++ .+.+.+++++..
T Consensus 713 ~p-------~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a 749 (816)
T 3s28_A 713 DP-------YHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRI 749 (816)
T ss_dssp CT-------TSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHH
T ss_pred CC-------CCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 77 35888999987766 6776 344555544433
No 41
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.39 E-value=0.0011 Score=67.93 Aligned_cols=94 Identities=14% Similarity=0.169 Sum_probs=64.2
Q ss_pred CCeEeecccchh---hhhcccCcceeee---ccCchhHHHhHhcCCcEEecccccchhHH-HHHHHHHhceeeEeecCCc
Q 042987 342 RGLVVESWAPQV---EVLNHESVGGFVT---HCGWNSVLEGVCAGVPMLAWPLYAEQKMI-RAVVVEEMKVGLAVTRSEE 414 (481)
Q Consensus 342 ~~v~v~~~~p~~---~ll~~~~~~~~I~---HgG~gt~~eal~~GvP~l~~P~~~DQ~~n-a~~v~~~~G~G~~l~~~~~ 414 (481)
++|.+.+++++. .++..+++ +|. .|+.+++.||+++|+|+|++|-..=.... +..+ +..|+...+..
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v~~--- 507 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMNVA--- 507 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGBCS---
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhhcC---
Confidence 578888999854 57888888 762 36677899999999999997753211112 3444 34466654432
Q ss_pred cCcccCHHHHHHHHHHHhcCch-hHHHHHHHHH
Q 042987 415 KDRLVSAAELEQRVSELMDSEK-GRAVKERAVA 446 (481)
Q Consensus 415 ~~~~~~~~~l~~~i~~~l~~~~-~~~~~~~a~~ 446 (481)
+.+++.+++.++++|++ .+.+++++++
T Consensus 508 -----~~~~la~~i~~l~~~~~~~~~~~~~~~~ 535 (568)
T 2vsy_A 508 -----DDAAFVAKAVALASDPAALTALHARVDV 535 (568)
T ss_dssp -----SHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 68999999999999886 2344444443
No 42
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.38 E-value=2.6e-06 Score=73.19 Aligned_cols=141 Identities=10% Similarity=0.089 Sum_probs=88.9
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhC-CCeEEEEEeCCCCCCccccccccccCchhhH--hhhcCCCeEeecccch---
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERS-GVKFLWVVRAPAPDSIENRSSLESLLPEGFL--DRTKDRGLVVESWAPQ--- 352 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~--~~~~~~~v~v~~~~p~--- 352 (481)
.+++..|++. ....+..++++++.. +..++++ |.... ...+-.-.. +.-..+++.+.+|+++
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~-G~~~~---------~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~ 91 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIV-GWFSK---------GDHAERYARKIMKIAPDNVKFLGSVSEEEL 91 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEE-BCCCT---------TSTHHHHHHHHHHHSCTTEEEEESCCHHHH
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEE-ecCcc---------HHHHHHHHHhhhcccCCcEEEeCCCCHHHH
Confidence 3455567765 234466677777776 5565554 43210 011111111 1112458888899997
Q ss_pred hhhhcccCcceeee---ccCc-hhHHHhHhcCCcEEecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHH
Q 042987 353 VEVLNHESVGGFVT---HCGW-NSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRV 428 (481)
Q Consensus 353 ~~ll~~~~~~~~I~---HgG~-gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i 428 (481)
..++..+++ +|. +.|. .++.||+++|+|+|+... ..+...+ +.-+.|..+ . -+.+++.++|
T Consensus 92 ~~~~~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~-~-------~d~~~l~~~i 156 (177)
T 2f9f_A 92 IDLYSRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLV-N-------ADVNEIIDAM 156 (177)
T ss_dssp HHHHHHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEE-C-------SCHHHHHHHH
T ss_pred HHHHHhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEe-C-------CCHHHHHHHH
Confidence 468999998 776 3344 489999999999999754 4455555 343577777 4 4799999999
Q ss_pred HHHhcCchhHHHHHHHHHHH
Q 042987 429 SELMDSEKGRAVKERAVAMK 448 (481)
Q Consensus 429 ~~~l~~~~~~~~~~~a~~l~ 448 (481)
.++++|++ .+++++++.+
T Consensus 157 ~~l~~~~~--~~~~~~~~~a 174 (177)
T 2f9f_A 157 KKVSKNPD--KFKKDCFRRA 174 (177)
T ss_dssp HHHHHCTT--TTHHHHHHHH
T ss_pred HHHHhCHH--HHHHHHHHHH
Confidence 99998876 1244444433
No 43
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.31 E-value=3.9e-05 Score=77.11 Aligned_cols=134 Identities=13% Similarity=0.067 Sum_probs=78.5
Q ss_pred EEEEecCCCcC-CCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeE-eecccchh--h
Q 042987 279 VLFLCFGSLGS-FSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLV-VESWAPQV--E 354 (481)
Q Consensus 279 ~v~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~-v~~~~p~~--~ 354 (481)
.+++..|.+.. ...+.+...+..+.+.+.+++++ |.+. ......+ ..+..+. ++++. +.++.... .
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~iv-G~g~-------~~~~~~l-~~~~~~~-~~~v~~~~g~~~~~~~~ 361 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVL-GAGD-------VALEGAL-LAAASRH-HGRVGVAIGYNEPLSHL 361 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEE-ECBC-------HHHHHHH-HHHHHHT-TTTEEEEESCCHHHHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEE-eCCc-------hHHHHHH-HHHHHhC-CCcEEEecCCCHHHHHH
Confidence 46677788762 23344433334443346666554 4320 0000101 1111122 35776 56773332 5
Q ss_pred hhcccCcceeeec----cCchhHHHhHhcCCcEEecccccchhHHHHHHHHHh---------ceeeEeecCCccCcccCH
Q 042987 355 VLNHESVGGFVTH----CGWNSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEM---------KVGLAVTRSEEKDRLVSA 421 (481)
Q Consensus 355 ll~~~~~~~~I~H----gG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~---------G~G~~l~~~~~~~~~~~~ 421 (481)
++..+++ +|.- |-..+++||+++|+|+|+... ......+ +.- +.|..++. -+.
T Consensus 362 ~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~-------~d~ 427 (485)
T 1rzu_A 362 MQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQFSP-------VTL 427 (485)
T ss_dssp HHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEESS-------CSH
T ss_pred HHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEeCC-------CCH
Confidence 7899998 7743 345689999999999999765 2334444 342 46777765 468
Q ss_pred HHHHHHHHHHh---cCch
Q 042987 422 AELEQRVSELM---DSEK 436 (481)
Q Consensus 422 ~~l~~~i~~~l---~~~~ 436 (481)
+++.++|.+++ +|++
T Consensus 428 ~~la~~i~~ll~~~~~~~ 445 (485)
T 1rzu_A 428 DGLKQAIRRTVRYYHDPK 445 (485)
T ss_dssp HHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHhCCHH
Confidence 99999999999 6765
No 44
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.24 E-value=8.9e-05 Score=74.46 Aligned_cols=81 Identities=11% Similarity=0.057 Sum_probs=57.3
Q ss_pred CCeE-eecccch--hhhhcccCcceeeec----cCchhHHHhHhcCCcEEecccccchhHHHHHHHHHh---------ce
Q 042987 342 RGLV-VESWAPQ--VEVLNHESVGGFVTH----CGWNSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEM---------KV 405 (481)
Q Consensus 342 ~~v~-v~~~~p~--~~ll~~~~~~~~I~H----gG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~---------G~ 405 (481)
+++. +.++... ..++..+++ +|.- |...+++||+++|+|+|+... ..+...+ +.- +.
T Consensus 347 ~~v~~~~g~~~~~~~~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~ 419 (485)
T 2qzs_A 347 GQVGVQIGYHEAFSHRIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVAS 419 (485)
T ss_dssp TTEEEEESCCHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCC
T ss_pred CcEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccc
Confidence 5775 6677433 257899998 7743 335578899999999999854 2344444 342 46
Q ss_pred eeEeecCCccCcccCHHHHHHHHHHHh---cCch
Q 042987 406 GLAVTRSEEKDRLVSAAELEQRVSELM---DSEK 436 (481)
Q Consensus 406 G~~l~~~~~~~~~~~~~~l~~~i~~~l---~~~~ 436 (481)
|..++. -+.+++.++|.+++ +|++
T Consensus 420 G~l~~~-------~d~~~la~~i~~ll~~~~~~~ 446 (485)
T 2qzs_A 420 GFVFED-------SNAWSLLRAIRRAFVLWSRPS 446 (485)
T ss_dssp BEEECS-------SSHHHHHHHHHHHHHHHTSHH
T ss_pred eEEECC-------CCHHHHHHHHHHHHHHcCCHH
Confidence 777776 36899999999999 6765
No 45
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.91 E-value=0.0017 Score=62.76 Aligned_cols=97 Identities=20% Similarity=0.324 Sum_probs=68.5
Q ss_pred CeEeecccch-hhhhcccCcceeeec-----cCchhHHHhHhcCCcEEecccccchhHHHHHHHHHhceeeEeecCCccC
Q 042987 343 GLVVESWAPQ-VEVLNHESVGGFVTH-----CGWNSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKD 416 (481)
Q Consensus 343 ~v~v~~~~p~-~~ll~~~~~~~~I~H-----gG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~ 416 (481)
++.+.++... ..++..+++ ++.- +|..+++||+++|+|+|+-|..++.......+.+. |.++.. .
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~--~---- 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEV--K---- 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEEC--C----
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEe--C----
Confidence 4555555443 458888887 6542 24578999999999999888777776666554233 665544 2
Q ss_pred cccCHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHH
Q 042987 417 RLVSAAELEQRVSELMDSEK-GRAVKERAVAMKEAAA 452 (481)
Q Consensus 417 ~~~~~~~l~~~i~~~l~~~~-~~~~~~~a~~l~~~~~ 452 (481)
+.+++.++|.++++| + .+.|.+++++..+.-.
T Consensus 332 ---d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 332 ---NETELVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp ---SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 578999999999988 5 4568888887766544
No 46
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=97.75 E-value=0.006 Score=59.52 Aligned_cols=76 Identities=9% Similarity=0.037 Sum_probs=57.3
Q ss_pred CCCeEeecccchh---hhhcccCcceeee---ccC-chhHHHhH-------hcCCcEEecccccchhHHHHHHHHHhcee
Q 042987 341 DRGLVVESWAPQV---EVLNHESVGGFVT---HCG-WNSVLEGV-------CAGVPMLAWPLYAEQKMIRAVVVEEMKVG 406 (481)
Q Consensus 341 ~~~v~v~~~~p~~---~ll~~~~~~~~I~---HgG-~gt~~eal-------~~GvP~l~~P~~~DQ~~na~~v~~~~G~G 406 (481)
.++|.+.+++|+. .++..+++ +|. +-| .+++.||+ ++|+|+|+... + ..-..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcce
Confidence 3578888999865 47888998 664 234 45688999 99999999855 4 342457
Q ss_pred eE-eecCCccCcccCHHHHHHHHHHHhcCch
Q 042987 407 LA-VTRSEEKDRLVSAAELEQRVSELMDSEK 436 (481)
Q Consensus 407 ~~-l~~~~~~~~~~~~~~l~~~i~~~l~~~~ 436 (481)
.. ++. -+.+++.++|.++++|+.
T Consensus 331 ~l~v~~-------~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 331 RFGYTP-------GNADSVIAAITQALEAPR 354 (406)
T ss_dssp EEEECT-------TCHHHHHHHHHHHHHCCC
T ss_pred EEEeCC-------CCHHHHHHHHHHHHhCcc
Confidence 76 666 368999999999998764
No 47
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.64 E-value=0.0011 Score=57.56 Aligned_cols=91 Identities=15% Similarity=0.206 Sum_probs=65.3
Q ss_pred CeEe-ecccchh---hhhcccCcceeeecc---C-chhHHHhHhcCCcEEecccccchhHHHHHHHHHhceeeEeecCCc
Q 042987 343 GLVV-ESWAPQV---EVLNHESVGGFVTHC---G-WNSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEE 414 (481)
Q Consensus 343 ~v~v-~~~~p~~---~ll~~~~~~~~I~Hg---G-~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 414 (481)
++.+ .+++++. .++..+++ +|.-. | ..++.||+++|+|+|+.... .+...+ +. +.|..++.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~~-~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-TN-ETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-CT-TTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc-CC-CceEEecC---
Confidence 7888 8999853 58888998 77533 2 46789999999999987543 333444 23 67777766
Q ss_pred cCcccCHHHHHHHHHHHhc-Cch-hHHHHHHHHHHH
Q 042987 415 KDRLVSAAELEQRVSELMD-SEK-GRAVKERAVAMK 448 (481)
Q Consensus 415 ~~~~~~~~~l~~~i~~~l~-~~~-~~~~~~~a~~l~ 448 (481)
-+.+++.++|.++++ |++ .+.+.+++++..
T Consensus 165 ----~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~ 196 (200)
T 2bfw_A 165 ----GDPGELANAILKALELSRSDLSKFRENCKKRA 196 (200)
T ss_dssp ----TCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 368999999999998 876 345555555544
No 48
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.62 E-value=0.00057 Score=57.42 Aligned_cols=139 Identities=9% Similarity=0.120 Sum_probs=80.5
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhC----CCeEEEEEeCCCCCCccccccccccCchhhHhhhc--CCCeEeecccch
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERS----GVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTK--DRGLVVESWAPQ 352 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~v~v~~~~p~ 352 (481)
++++..|++.. ...+..++++++.. +..+ +.+|.+. ..+.+.+... ..++.+ +|+|+
T Consensus 3 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l-~i~G~g~-------------~~~~~~~~~~~~~~~v~~-g~~~~ 65 (166)
T 3qhp_A 3 FKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVL-LLKGKGP-------------DEKKIKLLAQKLGVKAEF-GFVNS 65 (166)
T ss_dssp EEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEE-EEECCST-------------THHHHHHHHHHHTCEEEC-CCCCH
T ss_pred eEEEEEeccch--hcCHHHHHHHHHHhccCCCeEE-EEEeCCc-------------cHHHHHHHHHHcCCeEEE-eecCH
Confidence 66777788752 33455666666654 2333 3334320 1112221111 126677 99886
Q ss_pred h---hhhcccCcceeee----ccCchhHHHhHhcCC-cEEecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHH
Q 042987 353 V---EVLNHESVGGFVT----HCGWNSVLEGVCAGV-PMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAEL 424 (481)
Q Consensus 353 ~---~ll~~~~~~~~I~----HgG~gt~~eal~~Gv-P~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l 424 (481)
. .++..+++ +|. -|...++.||+++|+ |+|+....+.-. ..+ +. +.. .+.. -+.+++
T Consensus 66 ~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~---~~~-~~-~~~-~~~~-------~~~~~l 130 (166)
T 3qhp_A 66 NELLEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSATR---QFA-LD-ERS-LFEP-------NNAKDL 130 (166)
T ss_dssp HHHHHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGG---GGC-SS-GGG-EECT-------TCHHHH
T ss_pred HHHHHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCchh---hhc-cC-Cce-EEcC-------CCHHHH
Confidence 4 47888888 775 244468999999996 999943222111 111 22 211 3333 379999
Q ss_pred HHHHHHHhcCch-hHHHHHHHHHHHH
Q 042987 425 EQRVSELMDSEK-GRAVKERAVAMKE 449 (481)
Q Consensus 425 ~~~i~~~l~~~~-~~~~~~~a~~l~~ 449 (481)
.++|.++++|++ .+.+.+++++..+
T Consensus 131 ~~~i~~l~~~~~~~~~~~~~~~~~~~ 156 (166)
T 3qhp_A 131 SAKIDWWLENKLERERMQNEYAKSAL 156 (166)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 999999999876 4556666665543
No 49
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.56 E-value=0.00089 Score=67.74 Aligned_cols=141 Identities=12% Similarity=0.118 Sum_probs=89.6
Q ss_pred cEEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEE--eCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhh-
Q 042987 278 SVLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVV--RAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVE- 354 (481)
Q Consensus 278 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~--~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~- 354 (481)
.++|.+|++.....++.+....+-+++.+..++|.. +.+. .....+-..+.+.--.+.+++.+.+|+.+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~--------g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~ 512 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN--------GITHPYVERFIKSYLGDSATAHPHSPYHQY 512 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC--------GGGHHHHHHHHHHHHGGGEEEECCCCHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc--------hhhHHHHHHHHHcCCCccEEEcCCCCHHHH
Confidence 589999999888899999988888888877777743 3210 00111111111111123566778888655
Q ss_pred --hhcccCcceeee---ccCchhHHHhHhcCCcEEecccccchhHH-HHHHHHHhceeeEeecCCccCcccCHHHHHHHH
Q 042987 355 --VLNHESVGGFVT---HCGWNSVLEGVCAGVPMLAWPLYAEQKMI-RAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRV 428 (481)
Q Consensus 355 --ll~~~~~~~~I~---HgG~gt~~eal~~GvP~l~~P~~~DQ~~n-a~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i 428 (481)
.+..+|+ ++. .+|..|++|||++|||+|+++-..=--.. +..+ ..+|+.-.+-. -+.++..+..
T Consensus 513 la~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL-~~~GLpE~LIA-------~d~eeYv~~A 582 (631)
T 3q3e_A 513 LRILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLF-KRLGLPEWLIA-------NTVDEYVERA 582 (631)
T ss_dssp HHHHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHH-HHTTCCGGGEE-------SSHHHHHHHH
T ss_pred HHHHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHH-HhcCCCcceec-------CCHHHHHHHH
Confidence 4477777 654 37889999999999999998753211122 2333 34566543222 3577777777
Q ss_pred HHHhcCch
Q 042987 429 SELMDSEK 436 (481)
Q Consensus 429 ~~~l~~~~ 436 (481)
.++.+|++
T Consensus 583 v~La~D~~ 590 (631)
T 3q3e_A 583 VRLAENHQ 590 (631)
T ss_dssp HHHHHCHH
T ss_pred HHHhCCHH
Confidence 78888886
No 50
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.49 E-value=0.0025 Score=66.95 Aligned_cols=142 Identities=18% Similarity=0.225 Sum_probs=92.8
Q ss_pred CCcEEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHh-hhcCCCeEeecccchhh
Q 042987 276 SRSVLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLD-RTKDRGLVVESWAPQVE 354 (481)
Q Consensus 276 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~~~~v~v~~~~p~~~ 354 (481)
++.++|.||.+.....++.+..-++-|++.+.-.+|....+. .....+-..+.. .+..+.+++.+..|..+
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~--------~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~ 592 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPA--------VGEPNIQQYAQNMGLPQNRIIFSPVAPKEE 592 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTG--------GGHHHHHHHHHHTTCCGGGEEEEECCCHHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcH--------HHHHHHHHHHHhcCCCcCeEEECCCCCHHH
Confidence 445999999999999999999999999998888999987641 001111111111 11234566777777554
Q ss_pred ---hhcccCcceeee---ccCchhHHHhHhcCCcEEeccccc-chhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHH
Q 042987 355 ---VLNHESVGGFVT---HCGWNSVLEGVCAGVPMLAWPLYA-EQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQR 427 (481)
Q Consensus 355 ---ll~~~~~~~~I~---HgG~gt~~eal~~GvP~l~~P~~~-DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~ 427 (481)
.+..+|+ +.- .+|.+|+.|||+.|||+|.++-.. =...-+..+ ..+|+.-.+.. +.++-.+.
T Consensus 593 ~l~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l-~~~gl~e~ia~--------~~~~Y~~~ 661 (723)
T 4gyw_A 593 HVRRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQL-TCLGCLELIAK--------NRQEYEDI 661 (723)
T ss_dssp HHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHH-HHHTCGGGBCS--------SHHHHHHH
T ss_pred HHHHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHH-HHcCCcccccC--------CHHHHHHH
Confidence 4455666 765 899999999999999999999422 222234444 56677655543 45554444
Q ss_pred HHHHhcCch
Q 042987 428 VSELMDSEK 436 (481)
Q Consensus 428 i~~~l~~~~ 436 (481)
..++-+|.+
T Consensus 662 a~~la~d~~ 670 (723)
T 4gyw_A 662 AVKLGTDLE 670 (723)
T ss_dssp HHHHHHCHH
T ss_pred HHHHhcCHH
Confidence 445555665
No 51
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.43 E-value=0.0034 Score=61.26 Aligned_cols=77 Identities=14% Similarity=0.143 Sum_probs=54.8
Q ss_pred eEeecccchh---hhhcccCcceeee----ccCchhHHHhHhcCCcEEecccccchhHHHHHHHHHhce-----------
Q 042987 344 LVVESWAPQV---EVLNHESVGGFVT----HCGWNSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKV----------- 405 (481)
Q Consensus 344 v~v~~~~p~~---~ll~~~~~~~~I~----HgG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~----------- 405 (481)
+.+.+|+++. .++..+++ +|. -|...++.||+++|+|+|+.... .....+ +. |.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v-~~-~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYF-SG-DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHS-CT-TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHH-cc-Ccccccccccccc
Confidence 6667899854 47888998 764 23345899999999999996543 333444 23 33
Q ss_pred -----ee--EeecCCccCcccCHHHHHHHHHHHhcCch
Q 042987 406 -----GL--AVTRSEEKDRLVSAAELEQRVSELMDSEK 436 (481)
Q Consensus 406 -----G~--~l~~~~~~~~~~~~~~l~~~i~~~l~~~~ 436 (481)
|. .+.. -+.+++.++| ++++|++
T Consensus 328 ~~~~~G~~gl~~~-------~d~~~la~~i-~l~~~~~ 357 (413)
T 3oy2_A 328 VDDRDGIGGIEGI-------IDVDDLVEAF-TFFKDEK 357 (413)
T ss_dssp CTTTCSSCCEEEE-------CCHHHHHHHH-HHTTSHH
T ss_pred cccccCcceeeCC-------CCHHHHHHHH-HHhcCHH
Confidence 44 5554 3699999999 9999876
No 52
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.20 E-value=0.028 Score=53.49 Aligned_cols=106 Identities=8% Similarity=0.006 Sum_probs=66.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCee-EEEcCCCCCCCCCCCC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVT-FHQLPPPVSGLPDTLR 81 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-f~~~~~~~~~l~~~~~ 81 (481)
++|+++-..+.||+.=..++.++|+++-|+.+|++++.... ....+ ..|.+. ++.++..
T Consensus 9 ~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~-------~~l~~----~~p~vd~vi~~~~~--------- 68 (349)
T 3tov_A 9 KRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKL-------QQVME----YNPNIDELIVVDKK--------- 68 (349)
T ss_dssp CEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGG-------GGGTS----SCTTCSEEEEECCS---------
T ss_pred CEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcch-------hHHHh----cCCCccEEEEeCcc---------
Confidence 58999999999999999999999999977799999986633 22222 234443 4444311
Q ss_pred CCCCchHHHHHHHHhhhHHHHHHHHHhhccCCc-cEEEECCCCcchHHhhhhhcCCceEEE
Q 042987 82 SPADFPALVYELGELNNPKLHETLITISKRSNL-KAFVIDFFCNPAFQVSSSTLSIPTYYY 141 (481)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~p-D~VI~D~~~~~~~~~A~~~lgiP~v~~ 141 (481)
.....+... ..+...++.. ++ |++|.=....-...++ ...|+|...-
T Consensus 69 ---~~~~~~~~~-----~~l~~~Lr~~----~y~D~vidl~~~~rs~~l~-~~~~a~~riG 116 (349)
T 3tov_A 69 ---GRHNSISGL-----NEVAREINAK----GKTDIVINLHPNERTSYLA-WKIHAPITTG 116 (349)
T ss_dssp ---SHHHHHHHH-----HHHHHHHHHH----CCCCEEEECCCSHHHHHHH-HHHCCSEEEE
T ss_pred ---cccccHHHH-----HHHHHHHhhC----CCCeEEEECCCChHHHHHH-HHhCCCeEEe
Confidence 111111111 1122233333 89 9999654444456677 8889997653
No 53
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.88 E-value=0.062 Score=50.89 Aligned_cols=38 Identities=18% Similarity=0.217 Sum_probs=34.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 4 TIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 4 ~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
||+++...+.||+.=..++.++|+++-|+.+|++++..
T Consensus 2 kILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~ 39 (348)
T 1psw_A 2 KILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPA 39 (348)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECG
T ss_pred eEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECc
Confidence 69999999999999999999999998677999999865
No 54
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.79 E-value=0.003 Score=59.90 Aligned_cols=95 Identities=9% Similarity=0.104 Sum_probs=68.7
Q ss_pred CeEeecccchhhh---hcccCcceeeeccCc---------hhHHHhHhcCCcEEecccccchhHHHHHHHHHhceeeEee
Q 042987 343 GLVVESWAPQVEV---LNHESVGGFVTHCGW---------NSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVT 410 (481)
Q Consensus 343 ~v~v~~~~p~~~l---l~~~~~~~~I~HgG~---------gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~ 410 (481)
||...+|+|+.++ |..++.+++..-+.. +-+.|+|++|+|+|+.+ ...++..+. +-|+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~-~~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIE-NNGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHH-HHTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHH-hCCeEEEeC
Confidence 8889999998775 444555444422322 34789999999999865 345667774 449999874
Q ss_pred cCCccCcccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHH
Q 042987 411 RSEEKDRLVSAAELEQRVSELMDSEKGRAVKERAVAMKEAAA 452 (481)
Q Consensus 411 ~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~ 452 (481)
+.+++.+++.++. .+..++|++|+++.+++++
T Consensus 290 ---------~~~e~~~~i~~l~-~~~~~~m~~na~~~a~~~~ 321 (339)
T 3rhz_A 290 ---------DVEEAIMKVKNVN-EDEYIELVKNVRSFNPILR 321 (339)
T ss_dssp ---------SHHHHHHHHHHCC-HHHHHHHHHHHHHHTHHHH
T ss_pred ---------CHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhh
Confidence 2578888888764 3346789999999999887
No 55
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=94.07 E-value=0.1 Score=50.88 Aligned_cols=80 Identities=13% Similarity=0.062 Sum_probs=57.1
Q ss_pred CCeEeecccchh---hhhcccCcceeeecc---Cc-hhHHHhHhcCCcEEecccccchhHHHHHHHHHhceeeEeecCCc
Q 042987 342 RGLVVESWAPQV---EVLNHESVGGFVTHC---GW-NSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEE 414 (481)
Q Consensus 342 ~~v~v~~~~p~~---~ll~~~~~~~~I~Hg---G~-gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 414 (481)
+++.+.+++|+. .++..+++ +|.-. |. .+++||+++|+|+|+ -..+ ....+ +.-..|+.++.
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv~~--- 363 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSLEQ--- 363 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEESS---
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEeCC---
Confidence 367788999865 47888998 77432 33 467999999999998 3322 11233 44236777776
Q ss_pred cCcccCHHHHHHHHHHHhcCch
Q 042987 415 KDRLVSAAELEQRVSELMDSEK 436 (481)
Q Consensus 415 ~~~~~~~~~l~~~i~~~l~~~~ 436 (481)
-+++++.++|.++++|++
T Consensus 364 ----~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 364 ----LNPENIAETLVELCMSFN 381 (413)
T ss_dssp ----CSHHHHHHHHHHHHHHTC
T ss_pred ----CCHHHHHHHHHHHHcCHH
Confidence 368999999999998886
No 56
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=93.41 E-value=1 Score=45.32 Aligned_cols=138 Identities=13% Similarity=0.117 Sum_probs=71.1
Q ss_pred EEEEecCCCc-CCCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchh---h
Q 042987 279 VLFLCFGSLG-SFSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQV---E 354 (481)
Q Consensus 279 ~v~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~---~ 354 (481)
++++..|.+. ....+.+.+.+..+.+.+.+++++..++ ......+ ... ....+.++.+....+.. .
T Consensus 328 p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~--------~~~~~~~-~~~-~~~~~~~v~~~~~~~~~~~~~ 397 (536)
T 3vue_A 328 PLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGK--------KKFEKLL-KSM-EEKYPGKVRAVVKFNAPLAHL 397 (536)
T ss_dssp CEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBC--------HHHHHHH-HHH-HHHSTTTEEEECSCCHHHHHH
T ss_pred cEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccC--------chHHHHH-HHH-HhhcCCceEEEEeccHHHHHH
Confidence 5666678876 2233333333333444566766553321 0000000 011 11223566666666653 4
Q ss_pred hhcccCcceeeecc---Cc-hhHHHhHhcCCcEEecccccchhHHHHHHHHHhceeeEeecCCccCcc---cCHHHHHHH
Q 042987 355 VLNHESVGGFVTHC---GW-NSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRL---VSAAELEQR 427 (481)
Q Consensus 355 ll~~~~~~~~I~Hg---G~-gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~---~~~~~l~~~ 427 (481)
++..+++ ||.-. |. .+++||+++|+|.|+.... -....| +.-.-|..........-. .+.+.+.++
T Consensus 398 ~~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V-~dg~~G~~~~~~~~~g~l~~~~d~~~la~a 470 (536)
T 3vue_A 398 IMAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTV-IEGKTGFHMGRLSVDCKVVEPSDVKKVAAT 470 (536)
T ss_dssp HHHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHC-CBTTTEEECCCCCSCTTCCCHHHHHHHHHH
T ss_pred HHHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCCC----Cchhee-eCCCCccccccCCCceeEECCCCHHHHHHH
Confidence 7888888 77532 33 4889999999999997553 233333 231234332221100000 356788999
Q ss_pred HHHHhc
Q 042987 428 VSELMD 433 (481)
Q Consensus 428 i~~~l~ 433 (481)
|+++++
T Consensus 471 i~ral~ 476 (536)
T 3vue_A 471 LKRAIK 476 (536)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988874
No 57
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=89.58 E-value=2.7 Score=41.55 Aligned_cols=110 Identities=11% Similarity=0.086 Sum_probs=72.6
Q ss_pred CeEeecccchh---hhhcccCcceeee---ccCchh-HHHhHhcC---CcEEecccccchhHHHHHHHHHhc-eeeEeec
Q 042987 343 GLVVESWAPQV---EVLNHESVGGFVT---HCGWNS-VLEGVCAG---VPMLAWPLYAEQKMIRAVVVEEMK-VGLAVTR 411 (481)
Q Consensus 343 ~v~v~~~~p~~---~ll~~~~~~~~I~---HgG~gt-~~eal~~G---vP~l~~P~~~DQ~~na~~v~~~~G-~G~~l~~ 411 (481)
.|.+...+|+. .++..+++ +|. .=|.|. ..|++++| .|+|+--+.+= + +.+| -|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa----~----~~l~~~allVnP 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCGA----A----EVLGEYCRSVNP 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTT----H----HHHGGGSEEECT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCCC----H----HHhCCCEEEECC
Confidence 46666777764 46777888 554 458885 57999996 67776655431 1 2233 4788888
Q ss_pred CCccCcccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 042987 412 SEEKDRLVSAAELEQRVSELMDSEKGRAVKERAVAMKEAAAAAMRDGGSSRVALDNLVESFKRG 475 (481)
Q Consensus 412 ~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 475 (481)
.+.+.++++|.++|+++. ++-+++.+++.+.++ ........+.+++.|...
T Consensus 423 -------~D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 423 -------FDLVEQAEAISAALAAGP-RQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp -------TBHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHHH
T ss_pred -------CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhhc
Confidence 579999999999998663 224444555555444 344447788888887653
No 58
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=86.53 E-value=5.2 Score=39.48 Aligned_cols=107 Identities=12% Similarity=0.088 Sum_probs=67.5
Q ss_pred eecccchhh---hhcccCcceeee---ccCch-hHHHhHhcCC-----cEEecccccchhHHHHHHHHHhceeeEeecCC
Q 042987 346 VESWAPQVE---VLNHESVGGFVT---HCGWN-SVLEGVCAGV-----PMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSE 413 (481)
Q Consensus 346 v~~~~p~~~---ll~~~~~~~~I~---HgG~g-t~~eal~~Gv-----P~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 413 (481)
+.+++++.+ ++..+++ +|. .=|.| ++.||+++|+ |+|+--+.+--. .+.-|+.+++
T Consensus 336 ~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~--------~l~~g~lv~p-- 403 (482)
T 1uqt_A 336 LNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAAN--------ELTSALIVNP-- 403 (482)
T ss_dssp ECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGG--------TCTTSEEECT--
T ss_pred eCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHH--------HhCCeEEECC--
Confidence 347777654 6778888 665 34665 6789999998 677665433111 1124667776
Q ss_pred ccCcccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 042987 414 EKDRLVSAAELEQRVSELMDSEKGRAVKERAVAMKEAAAAAMRDGGSSRVALDNLVESFKRG 475 (481)
Q Consensus 414 ~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 475 (481)
.+.+.++++|.++|+++.. ..+++.++.++.++ + -+.....+.+++.+.+.
T Consensus 404 -----~d~~~lA~ai~~lL~~~~~-~r~~~~~~~~~~v~----~-~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 404 -----YDRDEVAAALDRALTMSLA-ERISRHAEMLDVIV----K-NDINHWQECFISDLKQI 454 (482)
T ss_dssp -----TCHHHHHHHHHHHHTCCHH-HHHHHHHHHHHHHH----H-TCHHHHHHHHHHHHHHS
T ss_pred -----CCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHH----h-CCHHHHHHHHHHHHHhc
Confidence 5689999999999986431 12333333333333 2 34446778888887765
No 59
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=80.69 E-value=5.7 Score=35.27 Aligned_cols=39 Identities=10% Similarity=0.182 Sum_probs=24.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCC
Q 042987 2 KDTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPF 44 (481)
Q Consensus 2 ~~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~ 44 (481)
++|||+.-=-+. +.-=+.+|+++|.+.| | |+++.|....
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l~~~g--~-V~VvAP~~~~ 39 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG--R-VVVVAPDRNL 39 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS--E-EEEEEESSCC
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHHHhCC--C-EEEEeeCCCC
Confidence 036666543222 3344667889998888 5 9999876553
No 60
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=79.27 E-value=3.9 Score=41.93 Aligned_cols=36 Identities=17% Similarity=0.031 Sum_probs=27.6
Q ss_pred hhhhcccCcceeeecc---C-chhHHHhHhcCCcEEeccccc
Q 042987 353 VEVLNHESVGGFVTHC---G-WNSVLEGVCAGVPMLAWPLYA 390 (481)
Q Consensus 353 ~~ll~~~~~~~~I~Hg---G-~gt~~eal~~GvP~l~~P~~~ 390 (481)
.+++..+++ ||.-. | ..+.+||+++|+|+|+.-..+
T Consensus 513 ~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG 552 (725)
T 3nb0_A 513 DEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVSG 552 (725)
T ss_dssp HHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTBH
T ss_pred HHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCCC
Confidence 457889998 77543 3 348899999999999976543
No 61
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=78.41 E-value=2.2 Score=39.57 Aligned_cols=38 Identities=8% Similarity=0.103 Sum_probs=35.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 4 TIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 4 ~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
||+++-..+.||+.=..++.++|+++.|+.+|++++..
T Consensus 2 ~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~ 39 (326)
T 2gt1_A 2 RVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEE 39 (326)
T ss_dssp EEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEG
T ss_pred eEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEeh
Confidence 69999999999999999999999999888999999865
No 62
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=77.85 E-value=27 Score=28.97 Aligned_cols=43 Identities=12% Similarity=-0.021 Sum_probs=29.5
Q ss_pred eecccchh-h-hhcccCcceeeeccCchhHHH---hHhcCCcEEecccc
Q 042987 346 VESWAPQV-E-VLNHESVGGFVTHCGWNSVLE---GVCAGVPMLAWPLY 389 (481)
Q Consensus 346 v~~~~p~~-~-ll~~~~~~~~I~HgG~gt~~e---al~~GvP~l~~P~~ 389 (481)
++++.+.. . +...++ ..++--||.||..| ++.+++|++++|.+
T Consensus 93 ~~~~~~~Rk~~m~~~sd-a~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 93 VTGLGSARDNINALSSN-VLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp ECCCCSSSCCCCGGGCS-EEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred EcCCHHHHHHHHHHhCC-EEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 44555543 2 334444 46777899998765 57799999999984
No 63
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=77.46 E-value=2.7 Score=36.64 Aligned_cols=152 Identities=16% Similarity=0.065 Sum_probs=77.8
Q ss_pred hhcCCCCCcEEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecc
Q 042987 270 WLDSKPSRSVLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESW 349 (481)
Q Consensus 270 ~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~ 349 (481)
|++-.. +.++.|+.|.+. ...+..|.+.|..+.++-.. +.+.+.+.....++.....
T Consensus 26 fl~L~g-k~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~---------------~~~~l~~l~~~~~i~~i~~ 82 (223)
T 3dfz_A 26 MLDLKG-RSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT---------------VSAEINEWEAKGQLRVKRK 82 (223)
T ss_dssp EECCTT-CCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS---------------CCHHHHHHHHTTSCEEECS
T ss_pred EEEcCC-CEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC---------------CCHHHHHHHHcCCcEEEEC
Confidence 444433 348888877653 44566677778877665332 1122222222223333222
Q ss_pred cchhhhhcccCcceeeeccCchhHHHhHh----cCCcEEecccccchhHHH-----HHHHHHhceeeEeecCCccCcccC
Q 042987 350 APQVEVLNHESVGGFVTHCGWNSVLEGVC----AGVPMLAWPLYAEQKMIR-----AVVVEEMKVGLAVTRSEEKDRLVS 420 (481)
Q Consensus 350 ~p~~~ll~~~~~~~~I~HgG~gt~~eal~----~GvP~l~~P~~~DQ~~na-----~~v~~~~G~G~~l~~~~~~~~~~~ 420 (481)
.-....|..+++ +|.--|.-.+.+.++ .|+|+-+ .|.+..+ ..+ ++=++-+.+..+. ..-.-
T Consensus 83 ~~~~~dL~~adL--VIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv-~rg~l~iaIST~G--~sP~l 153 (223)
T 3dfz_A 83 KVGEEDLLNVFF--IVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQF-SRGRLSLAISTDG--ASPLL 153 (223)
T ss_dssp CCCGGGSSSCSE--EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEE-EETTEEEEEECTT--SCHHH
T ss_pred CCCHhHhCCCCE--EEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEE-EeCCEEEEEECCC--CCcHH
Confidence 222344666777 888777766665544 3555433 3444332 122 1112333333322 11123
Q ss_pred HHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHH
Q 042987 421 AAELEQRVSELMDSEKGRAVKERAVAMKEAAAAA 454 (481)
Q Consensus 421 ~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~ 454 (481)
+..|++.|++.+. +....+-+.+.++++++++.
T Consensus 154 a~~iR~~ie~~lp-~~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 154 TKRIKEDLSSNYD-ESYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HHHHHHHHHHHSC-THHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcc-HHHHHHHHHHHHHHHHHHHH
Confidence 4678888888874 33456888888888888753
No 64
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=70.20 E-value=2.3 Score=42.69 Aligned_cols=38 Identities=18% Similarity=0.226 Sum_probs=28.1
Q ss_pred cEEEEEcC---C---CccCHHHHHHHHHHHHhCCCCeEEEEEeCCC
Q 042987 3 DTIVFYTS---P---GRGHLNSMVELGKLILTYHPCFSIDIIIPTA 42 (481)
Q Consensus 3 ~~il~~~~---p---~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~ 42 (481)
+||++++. | +.|=-.-.-+|+++|+++| |+|++++|..
T Consensus 10 MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G--~~V~Vi~P~Y 53 (536)
T 3vue_A 10 MNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANG--HRVMVISPRY 53 (536)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTT--CEEEEEEECC
T ss_pred cEEEEEEEeccchhccCcHHHHHHHHHHHHHHcC--CeEEEEecCc
Confidence 47999974 2 2222234668999999999 9999998754
No 65
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=69.66 E-value=20 Score=31.69 Aligned_cols=39 Identities=10% Similarity=0.211 Sum_probs=26.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFV 45 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~ 45 (481)
+|||+.-=-+. |.-=+.+|+++|++.| +|+++.|.....
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g---~V~VVAP~~~~S 40 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG---RVVVVAPDRNLS 40 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS---EEEEEEESSCCT
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC---CEEEEecCCCcc
Confidence 46666553332 4455778899998876 899998875543
No 66
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=68.51 E-value=5.6 Score=33.14 Aligned_cols=41 Identities=10% Similarity=0.098 Sum_probs=33.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCC
Q 042987 1 MKDTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPF 44 (481)
Q Consensus 1 m~~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~ 44 (481)
|++||++.-.|+.|=.. ...|.+.|+++| ++|.++.+....
T Consensus 4 m~k~IllgvTGs~aa~k-~~~ll~~L~~~g--~~V~vv~T~~A~ 44 (175)
T 3qjg_A 4 MGENVLICLCGSVNSIN-ISHYIIELKSKF--DEVNVIASTNGR 44 (175)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHTTTC--SEEEEEECTGGG
T ss_pred CCCEEEEEEeCHHHHHH-HHHHHHHHHHCC--CEEEEEECcCHH
Confidence 66789888888877664 889999999999 999999876443
No 67
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=65.17 E-value=58 Score=26.95 Aligned_cols=141 Identities=15% Similarity=0.224 Sum_probs=77.7
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcc
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNH 358 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~ 358 (481)
.|-|-+||.+ +.+..+++...|+..+.++=..+-+. .-.|+.+.+ |+.+.+ -..
T Consensus 15 ~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------------HR~p~~l~~-----------~~~~a~-~~g 68 (183)
T 1o4v_A 15 RVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSA------------HRTPDRMFE-----------YAKNAE-ERG 68 (183)
T ss_dssp EEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCT------------TTCHHHHHH-----------HHHHTT-TTT
T ss_pred eEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc------------cCCHHHHHH-----------HHHHHH-hCC
Confidence 6777778875 67778888999999998865554331 223443321 111100 012
Q ss_pred cCcceeeeccCch----hHHHhHhcCCcEEecccccc--hhHHHHHHHHHh--ceeeEe-e-cCCccCcccCHHHHHHHH
Q 042987 359 ESVGGFVTHCGWN----SVLEGVCAGVPMLAWPLYAE--QKMIRAVVVEEM--KVGLAV-T-RSEEKDRLVSAAELEQRV 428 (481)
Q Consensus 359 ~~~~~~I~HgG~g----t~~eal~~GvP~l~~P~~~D--Q~~na~~v~~~~--G~G~~l-~-~~~~~~~~~~~~~l~~~i 428 (481)
.++ +|.=+|.. ++..++ .-+|+|.+|.... .-..+-.-.=++ |+.+.. . ... .++.-+...|
T Consensus 69 ~~V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~Id~~-----~nAa~lAaqI 140 (183)
T 1o4v_A 69 IEV--IIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAINNA-----KNAGILAASI 140 (183)
T ss_dssp CCE--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECCTTCH-----HHHHHHHHHH
T ss_pred CcE--EEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCc-----hHHHHHHHHH
Confidence 233 77666644 333333 6789999998542 222221111134 533221 1 122 5666666666
Q ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHhc
Q 042987 429 SELMDSEKGRAVKERAVAMKEAAAAAMRD 457 (481)
Q Consensus 429 ~~~l~~~~~~~~~~~a~~l~~~~~~~~~~ 457 (481)
. -+.|+. ++++.+.+++.++..+.+
T Consensus 141 l-a~~d~~---l~~kL~~~r~~~~~~v~~ 165 (183)
T 1o4v_A 141 L-GIKYPE---IARKVKEYKERMKREVLE 165 (183)
T ss_dssp H-HTTCHH---HHHHHHHHHHHHHHHHHH
T ss_pred H-hcCCHH---HHHHHHHHHHHHHHHHHH
Confidence 5 346776 888888888877755433
No 68
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=63.63 E-value=60 Score=26.54 Aligned_cols=145 Identities=15% Similarity=0.198 Sum_probs=77.4
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcc
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNH 358 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~ 358 (481)
.|-|-+||.+ +.+..+++...|+..+.++=..+-+. .-.|+.+.+ |+.+.+ -..
T Consensus 13 ~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------------HR~p~~l~~-----------~~~~a~-~~g 66 (170)
T 1xmp_A 13 LVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA------------HRTPDYMFE-----------YAETAR-ERG 66 (170)
T ss_dssp SEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------------TTSHHHHHH-----------HHHHTT-TTT
T ss_pred cEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec------------cCCHHHHHH-----------HHHHHH-hCC
Confidence 5666677765 67778888899999998865544331 223443321 111100 011
Q ss_pred cCcceeeeccCchhHHHhHh---cCCcEEecccccc--hhHHHHH-HHH-HhceeeE-eecCCccCcccCHHHHHHHHHH
Q 042987 359 ESVGGFVTHCGWNSVLEGVC---AGVPMLAWPLYAE--QKMIRAV-VVE-EMKVGLA-VTRSEEKDRLVSAAELEQRVSE 430 (481)
Q Consensus 359 ~~~~~~I~HgG~gt~~eal~---~GvP~l~~P~~~D--Q~~na~~-v~~-~~G~G~~-l~~~~~~~~~~~~~~l~~~i~~ 430 (481)
.++ +|.=+|...-+-.+. .-+|+|.+|.... +-..+-. +.+ --|+.+. +...+ .+..++.-+...|.
T Consensus 67 ~~V--iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP~GvpVatV~I~~--a~~~nAallAaqIl- 141 (170)
T 1xmp_A 67 LKV--IIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGK--AGSTNAGLLAAQIL- 141 (170)
T ss_dssp CCE--EEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCSSH--HHHHHHHHHHHHHH-
T ss_pred CcE--EEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCC--cchHHHHHHHHHHH-
Confidence 233 777666543333333 3589999998542 2222211 112 0144321 22210 01145666665554
Q ss_pred HhcCchhHHHHHHHHHHHHHHHHHHhc
Q 042987 431 LMDSEKGRAVKERAVAMKEAAAAAMRD 457 (481)
Q Consensus 431 ~l~~~~~~~~~~~a~~l~~~~~~~~~~ 457 (481)
-+.|+. ++++.+.+++++++.+.+
T Consensus 142 a~~d~~---l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 142 GSFHDD---IHDALELRREAIEKDVRE 165 (170)
T ss_dssp HTTCHH---HHHHHHHHHHHHHHHHHC
T ss_pred ccCCHH---HHHHHHHHHHHHHHHHHh
Confidence 346776 999999999988866544
No 69
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=63.22 E-value=59 Score=26.31 Aligned_cols=138 Identities=17% Similarity=0.218 Sum_probs=73.6
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcc
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNH 358 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~ 358 (481)
.|-|-+||.+ +.+..++....|+..+.++-..+-+. +-.|+.+. .|+.... ..
T Consensus 4 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~sa------------HR~p~~~~-----------~~~~~a~--~~ 56 (159)
T 3rg8_A 4 LVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSA------------HKTAEHVV-----------SMLKEYE--AL 56 (159)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT------------TTCHHHHH-----------HHHHHHH--TS
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc------------cCCHHHHH-----------HHHHHhh--hc
Confidence 4566667765 66778888888999998865554331 22444332 1111111 00
Q ss_pred cCcceeeeccCchhHHHhHh---cCCcEEeccccc---chhHHHHHHHHHh--ceeeEeecCCccCcccCHHHHHHHHHH
Q 042987 359 ESVGGFVTHCGWNSVLEGVC---AGVPMLAWPLYA---EQKMIRAVVVEEM--KVGLAVTRSEEKDRLVSAAELEQRVSE 430 (481)
Q Consensus 359 ~~~~~~I~HgG~gt~~eal~---~GvP~l~~P~~~---DQ~~na~~v~~~~--G~G~~l~~~~~~~~~~~~~~l~~~i~~ 430 (481)
-.++++|.=+|...-+-++. .-+|+|.+|... +..+--..+ + + |+.+.--... .++.-+...|..
T Consensus 57 ~~~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dLlS~v-q-mp~GvpVatv~~~-----~nAa~lA~~Il~ 129 (159)
T 3rg8_A 57 DRPKLYITIAGRSNALSGFVDGFVKGATIACPPPSDSFAGADIYSSL-R-MPSGISPALVLEP-----KNAALLAARIFS 129 (159)
T ss_dssp CSCEEEEEECCSSCCHHHHHHHHSSSCEEECCCCCCGGGGTHHHHHH-C-CCTTCCCEECCSH-----HHHHHHHHHHHT
T ss_pred CCCcEEEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCCccHHHHH-h-CCCCCceEEecCc-----hHHHHHHHHHHh
Confidence 01233777777553333332 558999999743 222211222 1 2 4443221222 566655554443
Q ss_pred HhcCchhHHHHHHHHHHHHHHHHH
Q 042987 431 LMDSEKGRAVKERAVAMKEAAAAA 454 (481)
Q Consensus 431 ~l~~~~~~~~~~~a~~l~~~~~~~ 454 (481)
+.|+. ++++.+.++++.++.
T Consensus 130 -~~d~~---l~~kl~~~r~~~~~~ 149 (159)
T 3rg8_A 130 -LYDKE---IADSVKSYMESNAQK 149 (159)
T ss_dssp -TTCHH---HHHHHHHHHHHHHHH
T ss_pred -CCCHH---HHHHHHHHHHHHHHH
Confidence 35666 888888888877643
No 70
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=61.13 E-value=56 Score=27.55 Aligned_cols=102 Identities=10% Similarity=0.095 Sum_probs=58.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCCCCCCCCCCCCC
Q 042987 4 TIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPPVSGLPDTLRSP 83 (481)
Q Consensus 4 ~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~l~~~~~~~ 83 (481)
.|.+++..+.|=..-.+.+|.+...+| .+|.|+..-...... .-...++.. ++.++..... +.. .
T Consensus 30 ~i~v~tG~GkGKTTaA~GlalRA~g~G--~rV~~vQF~Kg~~~~-gE~~~l~~L-----~v~~~~~g~g---f~~---~- 94 (196)
T 1g5t_A 30 IIIVFTGNGKGKTTAAFGTAARAVGHG--KNVGVVQFIKGTWPN-GERNLLEPH-----GVEFQVMATG---FTW---E- 94 (196)
T ss_dssp CEEEEESSSSCHHHHHHHHHHHHHHTT--CCEEEEESSCCSSCC-HHHHHHGGG-----TCEEEECCTT---CCC---C-
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHHCC--CeEEEEEeeCCCCCc-cHHHHHHhC-----CcEEEEcccc---ccc---C-
Confidence 588999999999999999999999999 999999543211000 001122332 4777777642 221 1
Q ss_pred CCchHHHHHHHHhhhHHHHHHHHHhhccCCccEEEECCCCc
Q 042987 84 ADFPALVYELGELNNPKLHETLITISKRSNLKAFVIDFFCN 124 (481)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~pD~VI~D~~~~ 124 (481)
..... +-.......+..+.+.+. +.++|+||.|.+.+
T Consensus 95 ~~~~~---~~~~~a~~~l~~a~~~l~-~~~yDlvILDEi~~ 131 (196)
T 1g5t_A 95 TQNRE---ADTAACMAVWQHGKRMLA-DPLLDMVVLDELTY 131 (196)
T ss_dssp GGGHH---HHHHHHHHHHHHHHHHTT-CTTCSEEEEETHHH
T ss_pred CCCcH---HHHHHHHHHHHHHHHHHh-cCCCCEEEEeCCCc
Confidence 11111 111122333444433332 24899999997543
No 71
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=61.02 E-value=11 Score=35.11 Aligned_cols=36 Identities=14% Similarity=0.187 Sum_probs=30.8
Q ss_pred EEEEEcC-CCccCHHHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 4 TIVFYTS-PGRGHLNSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 4 ~il~~~~-p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
+|+|++. |+-|=..-..+||..|+++| .+|.++...
T Consensus 17 ~i~~~sgkGGvGKTt~a~~lA~~la~~g--~~vllid~D 53 (334)
T 3iqw_A 17 RWIFVGGKGGVGKTTTSCSLAIQLAKVR--RSVLLLSTD 53 (334)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHTTSS--SCEEEEECC
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHhCC--CcEEEEECC
Confidence 4555554 89999999999999999999 999999766
No 72
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=58.94 E-value=4.8 Score=38.81 Aligned_cols=38 Identities=16% Similarity=0.219 Sum_probs=29.5
Q ss_pred cEEEEEcCC---C--ccCHHHHHHHHHHHHhCCCCeEEEEEeCCC
Q 042987 3 DTIVFYTSP---G--RGHLNSMVELGKLILTYHPCFSIDIIIPTA 42 (481)
Q Consensus 3 ~~il~~~~p---~--~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~ 42 (481)
+||++++.. . .|=......||++|+++| |+|+++++..
T Consensus 47 mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~G--heV~Vvt~~~ 89 (413)
T 2x0d_A 47 KRLNLLVPSINQEHMFGGISTALKLFEQFDNKK--FKKRIILTDA 89 (413)
T ss_dssp CEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTT--CEEEEEESSC
T ss_pred ceEEEEeCCCCccccccHHHHHHHHHHHHHHcC--CceEEEEecC
Confidence 578888753 1 244456899999999999 9999998763
No 73
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=58.65 E-value=7.7 Score=34.94 Aligned_cols=28 Identities=7% Similarity=0.161 Sum_probs=24.0
Q ss_pred cCcceeeeccCchhHHHhHhc------CCcEEeccc
Q 042987 359 ESVGGFVTHCGWNSVLEGVCA------GVPMLAWPL 388 (481)
Q Consensus 359 ~~~~~~I~HgG~gt~~eal~~------GvP~l~~P~ 388 (481)
+++ +|.=||=||+++++.. ++|++.+|.
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 455 9999999999998765 899999976
No 74
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=58.48 E-value=6.5 Score=32.96 Aligned_cols=42 Identities=5% Similarity=0.045 Sum_probs=34.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCC
Q 042987 1 MKDTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFV 45 (481)
Q Consensus 1 m~~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~ 45 (481)
|.+||++.-.|+.|=. -...|.+.|+++| ++|.++.+.....
T Consensus 1 ~~k~IllgvTGs~aa~-k~~~l~~~L~~~g--~~V~vv~T~~A~~ 42 (181)
T 1g63_A 1 MYGKLLICATASINVI-NINHYIVELKQHF--DEVNILFSPSSKN 42 (181)
T ss_dssp CCCCEEEEECSCGGGG-GHHHHHHHHTTTS--SCEEEEECGGGGG
T ss_pred CCCEEEEEEECHHHHH-HHHHHHHHHHHCC--CEEEEEEchhHHH
Confidence 7778888888887766 6789999999999 9999998765443
No 75
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=58.17 E-value=14 Score=29.11 Aligned_cols=39 Identities=21% Similarity=0.060 Sum_probs=35.0
Q ss_pred CC-cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 1 MK-DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 1 m~-~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
|+ ++|++.+.+..+|-....-++..|+.+| ++|..+...
T Consensus 1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~G--~~Vi~lG~~ 40 (137)
T 1ccw_A 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAG--FNVVNIGVL 40 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTT--CEEEEEEEE
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHHHHHHCC--CEEEECCCC
Confidence 54 5999999999999999999999999999 999987543
No 76
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=56.12 E-value=7.1 Score=37.77 Aligned_cols=37 Identities=16% Similarity=0.199 Sum_probs=27.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCC
Q 042987 1 MKDTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTA 42 (481)
Q Consensus 1 m~~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~ 42 (481)
|.+||+++-.+..| +..|+.|++++++++||++....
T Consensus 1 M~K~VvIIGgG~aG-----l~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 1 MAKHVVVIGGGVGG-----IATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp -CCEEEEECSSHHH-----HHHHHHHHHHCTTCEEEEECSSS
T ss_pred CCCcEEEECCCHHH-----HHHHHHHhccCcCCeEEEEcCCC
Confidence 88899999766555 45677888877779999996553
No 77
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=51.92 E-value=61 Score=30.48 Aligned_cols=65 Identities=11% Similarity=0.106 Sum_probs=45.6
Q ss_pred ccchhhhhcccCcceeee----ccCch--hHHHhHhcCCcEEe-cccccchhHHHHHHHHHhceeeEeecCC
Q 042987 349 WAPQVEVLNHESVGGFVT----HCGWN--SVLEGVCAGVPMLA-WPLYAEQKMIRAVVVEEMKVGLAVTRSE 413 (481)
Q Consensus 349 ~~p~~~ll~~~~~~~~I~----HgG~g--t~~eal~~GvP~l~-~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 413 (481)
|-...+++..+++.++++ |++.+ -+.+||.+|++++| -|+..|+-.-..+++++-|+=..+....
T Consensus 57 ~~~~~~l~~~~D~v~i~~p~~~h~~~~~~~a~~al~aGkhVl~EKPl~~~ea~~l~~~A~~~g~~~~v~~~y 128 (372)
T 4gmf_A 57 YTSPEQITGMPDIACIVVRSTVAGGAGTQLARHFLARGVHVIQEHPLHPDDISSLQTLAQEQGCCYWINTFY 128 (372)
T ss_dssp ESSGGGCCSCCSEEEECCC--CTTSHHHHHHHHHHHTTCEEEEESCCCHHHHHHHHHHHHHHTCCEEEECSG
T ss_pred ECCHHHHhcCCCEEEEECCCcccchhHHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHcCCEEEEcCcc
Confidence 455677888888765553 56543 47789999999988 5666676666666666768777776543
No 78
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=50.43 E-value=27 Score=29.33 Aligned_cols=37 Identities=19% Similarity=0.374 Sum_probs=31.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 2 KDTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 2 ~~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
++||++.-.|+.|-. =...|.++|+++| ++|.++.+.
T Consensus 1 mk~IllgvTGs~aa~-k~~~l~~~L~~~g--~~V~vv~T~ 37 (189)
T 2ejb_A 1 MQKIALCITGASGVI-YGIKLLQVLEELD--FSVDLVISR 37 (189)
T ss_dssp CCEEEEEECSSTTHH-HHHHHHHHHHHTT--CEEEEEECH
T ss_pred CCEEEEEEECHHHHH-HHHHHHHHHHHCC--CEEEEEECh
Confidence 058999888998844 6899999999999 999999765
No 79
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=48.97 E-value=32 Score=33.50 Aligned_cols=148 Identities=13% Similarity=0.058 Sum_probs=74.1
Q ss_pred CcEEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhh
Q 042987 277 RSVLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVL 356 (481)
Q Consensus 277 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll 356 (481)
+.++.|+.|... ...++.|.+.+..+.++-.. ..+.+.+.....++.+..---+...|
T Consensus 13 ~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~---------------~~~~~~~l~~~~~i~~~~~~~~~~~l 70 (457)
T 1pjq_A 13 RDCLIVGGGDVA-------ERKARLLLEAGARLTVNALT---------------FIPQFTVWANEGMLTLVEGPFDETLL 70 (457)
T ss_dssp CEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESS---------------CCHHHHHHHTTTSCEEEESSCCGGGG
T ss_pred CEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCC---------------CCHHHHHHHhcCCEEEEECCCCcccc
Confidence 348888877754 44556666778777665432 11222222222233222111122334
Q ss_pred cccCcceeeeccCchh-----HHHhHhcCCcEEec--ccccchhHHHHHHH-HHhceeeEeecCCccCcccCHHHHHHHH
Q 042987 357 NHESVGGFVTHCGWNS-----VLEGVCAGVPMLAW--PLYAEQKMIRAVVV-EEMKVGLAVTRSEEKDRLVSAAELEQRV 428 (481)
Q Consensus 357 ~~~~~~~~I~HgG~gt-----~~eal~~GvP~l~~--P~~~DQ~~na~~v~-~~~G~G~~l~~~~~~~~~~~~~~l~~~i 428 (481)
..+++ +|.--|.-. ..+|-..|+|+-++ |-..+...-+ .+. ..+-+|+.-..+. ..-+..|++.|
T Consensus 71 ~~~~l--Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa-~~~~~~l~iaIsT~Gks----p~la~~ir~~i 143 (457)
T 1pjq_A 71 DSCWL--AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPS-IIDRSPLMVAVSSGGTS----PVLARLLREKL 143 (457)
T ss_dssp TTCSE--EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCE-EEEETTEEEEEECTTSC----HHHHHHHHHHH
T ss_pred CCccE--EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeee-EEEeCCeEEEEECCCCC----hHHHHHHHHHH
Confidence 56666 877777654 34566679996333 2222221100 000 1123444411111 02256788888
Q ss_pred HHHhcCchhHHHHHHHHHHHHHHHHH
Q 042987 429 SELMDSEKGRAVKERAVAMKEAAAAA 454 (481)
Q Consensus 429 ~~~l~~~~~~~~~~~a~~l~~~~~~~ 454 (481)
++.+... ...+.+.+.++++++++.
T Consensus 144 e~~l~~~-~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 144 ESLLPQH-LGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp HHHSCTT-HHHHHHHHHHHHHHHHHH
T ss_pred HHhcchh-HHHHHHHHHHHHHHHHhh
Confidence 8888542 334677777777777754
No 80
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=48.93 E-value=78 Score=26.19 Aligned_cols=35 Identities=14% Similarity=0.379 Sum_probs=28.5
Q ss_pred EEEE-cCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 5 IVFY-TSPGRGHLNSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 5 il~~-~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
|.+. +-|+-|=..=...||..|+++| ++|.++-..
T Consensus 4 i~v~s~kgG~GKTt~a~~la~~la~~g--~~vlliD~D 39 (206)
T 4dzz_A 4 ISFLNPKGGSGKTTAVINIATALSRSG--YNIAVVDTD 39 (206)
T ss_dssp EEECCSSTTSSHHHHHHHHHHHHHHTT--CCEEEEECC
T ss_pred EEEEeCCCCccHHHHHHHHHHHHHHCC--CeEEEEECC
Confidence 4444 3478899999999999999999 999999544
No 81
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=48.86 E-value=11 Score=33.39 Aligned_cols=34 Identities=21% Similarity=0.091 Sum_probs=25.2
Q ss_pred CCccEEE-ECCCCc-chHHhhhhhcCCceEEEeccch
Q 042987 112 SNLKAFV-IDFFCN-PAFQVSSSTLSIPTYYYFTTAG 146 (481)
Q Consensus 112 ~~pD~VI-~D~~~~-~~~~~A~~~lgiP~v~~~~~~~ 146 (481)
..||+|| .|+..- -++.-| .++|||+|.++-+.+
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA-~~l~IPvIaivDTn~ 192 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREA-RKLFIPVIALADTDS 192 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHH-HHTTCCCEECCCTTS
T ss_pred cCCCEEEEeCCccchHHHHHH-HHcCCCEEEEecCCC
Confidence 4799887 565433 466678 999999999877654
No 82
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=48.62 E-value=1e+02 Score=25.53 Aligned_cols=144 Identities=14% Similarity=0.171 Sum_probs=76.6
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcc
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNH 358 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~ 358 (481)
.|-|-+||.+ +.+..++....|+..+.++=..+-+. +-.|+.+.+ |+.+.. -..
T Consensus 23 ~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------------HR~p~~l~~-----------~~~~a~-~~g 76 (182)
T 1u11_A 23 VVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSA------------HRTPDRLAD-----------YARTAA-ERG 76 (182)
T ss_dssp SEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------------TTCHHHHHH-----------HHHHTT-TTT
T ss_pred EEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcc------------cCCHHHHHH-----------HHHHHH-hCC
Confidence 4556667765 67778888899999998865544331 224443321 111100 011
Q ss_pred cCcceeeeccCch----hHHHhHhcCCcEEecccccc--hhHHHHH-HHH-HhceeeE-eecCCccCcccCHHHHHHHHH
Q 042987 359 ESVGGFVTHCGWN----SVLEGVCAGVPMLAWPLYAE--QKMIRAV-VVE-EMKVGLA-VTRSEEKDRLVSAAELEQRVS 429 (481)
Q Consensus 359 ~~~~~~I~HgG~g----t~~eal~~GvP~l~~P~~~D--Q~~na~~-v~~-~~G~G~~-l~~~~~~~~~~~~~~l~~~i~ 429 (481)
.++ +|.=+|.. ++..++ .-+|+|.+|.... .-..+-. +.+ --|+.+. +...+ .+..++.-+...|.
T Consensus 77 ~~V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~I~~--a~~~nAallAaqIl 151 (182)
T 1u11_A 77 LNV--IIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGA--SGAKNAALLAASIL 151 (182)
T ss_dssp CCE--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSH--HHHHHHHHHHHHHH
T ss_pred CcE--EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCceEEEecCC--ccchHHHHHHHHHH
Confidence 233 77666644 333333 4789999998542 1222111 112 0244422 22210 01145555655554
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHHHHhc
Q 042987 430 ELMDSEKGRAVKERAVAMKEAAAAAMRD 457 (481)
Q Consensus 430 ~~l~~~~~~~~~~~a~~l~~~~~~~~~~ 457 (481)
-+.|+. ++++.+.+++++++.+.+
T Consensus 152 -a~~d~~---l~~kL~~~r~~~~~~v~~ 175 (182)
T 1u11_A 152 -ALYNPA---LAARLETWRALQTASVPN 175 (182)
T ss_dssp -GGGCHH---HHHHHHHHHHHHHHHSCS
T ss_pred -ccCCHH---HHHHHHHHHHHHHHHHHH
Confidence 345776 999999999988865444
No 83
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=48.52 E-value=96 Score=29.51 Aligned_cols=32 Identities=0% Similarity=-0.049 Sum_probs=22.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
+|++++..+-. + | .+.++.++.| ++|+++...
T Consensus 6 k~l~Il~~~~~-~--~--~i~~aa~~lG--~~vv~v~~~ 37 (425)
T 3vot_A 6 KNLAIICQNKH-L--P--FIFEEAERLG--LKVTFFYNS 37 (425)
T ss_dssp CEEEEECCCTT-C--C--HHHHHHHHTT--CEEEEEEET
T ss_pred cEEEEECCChh-H--H--HHHHHHHHCC--CEEEEEECC
Confidence 47888875433 2 2 3567788899 999998654
No 84
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=48.50 E-value=24 Score=30.21 Aligned_cols=37 Identities=11% Similarity=0.151 Sum_probs=32.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 2 KDTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 2 ~~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
++||++--.|+.|-.. ...|.+.|+++| ++|.++.+.
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g--~eV~vv~T~ 40 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEE--REVHFLISK 40 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTT--CEEEEEECH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCC--CEEEEEECc
Confidence 3589888888888777 899999999999 999999765
No 85
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=47.79 E-value=1.3e+02 Score=26.86 Aligned_cols=36 Identities=6% Similarity=0.002 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHh---cCchhHHHHHHHHHHHHHHHHHH
Q 042987 420 SAAELEQRVSELM---DSEKGRAVKERAVAMKEAAAAAM 455 (481)
Q Consensus 420 ~~~~l~~~i~~~l---~~~~~~~~~~~a~~l~~~~~~~~ 455 (481)
-+..|++.|++.+ .++....+-+.+.++++.+++..
T Consensus 173 lA~~ir~~ie~~l~~~p~~~~~~~~~~l~~~R~~ik~~~ 211 (274)
T 1kyq_A 173 FGALVRDEIRNLFTQMGDLALEDAVVKLGELRRGIRLLA 211 (274)
T ss_dssp HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhC
Confidence 3467888898888 54444457888888888888653
No 86
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=47.33 E-value=29 Score=30.10 Aligned_cols=29 Identities=10% Similarity=0.090 Sum_probs=24.6
Q ss_pred cCcceeeeccCchhHHHhHhcCCcEEeccccc
Q 042987 359 ESVGGFVTHCGWNSVLEGVCAGVPMLAWPLYA 390 (481)
Q Consensus 359 ~~~~~~I~HgG~gt~~eal~~GvP~l~~P~~~ 390 (481)
+++ +|+.||........ .++|+|-++..+
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 555 99999999999875 689999999863
No 87
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=45.85 E-value=38 Score=31.67 Aligned_cols=27 Identities=19% Similarity=0.298 Sum_probs=21.2
Q ss_pred ccCcceeeeccCchhH---HHhHhcCCcEEec
Q 042987 358 HESVGGFVTHCGWNSV---LEGVCAGVPMLAW 386 (481)
Q Consensus 358 ~~~~~~~I~HgG~gt~---~eal~~GvP~l~~ 386 (481)
.+++ +|++||.-+. ..|-..|+|.++.
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 4666 9999998765 4567789999974
No 88
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=45.09 E-value=1.8e+02 Score=26.83 Aligned_cols=109 Identities=15% Similarity=0.210 Sum_probs=59.9
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhC-CCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhc
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERS-GVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLN 357 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~ 357 (481)
+.+|++|.+. ...+.++.+. +..++.++... ++.. +.....++ ..+-...++|.
T Consensus 8 vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~---------------~~~~-~~a~~~g~--~~~~~~~~ll~ 62 (359)
T 3e18_A 8 LVIVGYGGMG-------SYHVTLASAADNLEVHGVFDIL---------------AEKR-EAAAQKGL--KIYESYEAVLA 62 (359)
T ss_dssp EEEECCSHHH-------HHHHHHHHTSTTEEEEEEECSS---------------HHHH-HHHHTTTC--CBCSCHHHHHH
T ss_pred EEEECcCHHH-------HHHHHHHHhCCCcEEEEEEcCC---------------HHHH-HHHHhcCC--ceeCCHHHHhc
Confidence 7888888775 2344556555 55555454332 1111 11111233 23556778888
Q ss_pred ccCcceeeeccCch----hHHHhHhcCCcEEe-cccc--cchhHHHHHHHHHhceeeEeecC
Q 042987 358 HESVGGFVTHCGWN----SVLEGVCAGVPMLA-WPLY--AEQKMIRAVVVEEMKVGLAVTRS 412 (481)
Q Consensus 358 ~~~~~~~I~HgG~g----t~~eal~~GvP~l~-~P~~--~DQ~~na~~v~~~~G~G~~l~~~ 412 (481)
.+++++++--.-.. .+.+|+.+|++++| -|+. .++-.-...++++.|+-+.+...
T Consensus 63 ~~~~D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~ 124 (359)
T 3e18_A 63 DEKVDAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQN 124 (359)
T ss_dssp CTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECG
T ss_pred CCCCCEEEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEee
Confidence 66655566544433 36788999999998 4654 34444333444555766655543
No 89
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=43.98 E-value=1.3e+02 Score=24.31 Aligned_cols=134 Identities=22% Similarity=0.273 Sum_probs=70.2
Q ss_pred EEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcccC
Q 042987 281 FLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNHES 360 (481)
Q Consensus 281 ~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~~~ 360 (481)
-|-+||.+ +.+..++....|+..+.++=..+-+ .+-.|+.+.+-.+ .. ..+
T Consensus 3 ~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~s------------aHR~p~~~~~~~~-----------~a----~~~ 53 (157)
T 2ywx_A 3 CIIMGSES--DLKIAEKAVNILKEFGVEFEVRVAS------------AHRTPELVEEIVK-----------NS----KAD 53 (157)
T ss_dssp EEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC------------TTTCHHHHHHHHH-----------HC----CCS
T ss_pred EEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEc------------ccCCHHHHHHHHH-----------hc----CCC
Confidence 34456654 6677788888899998875444432 1224443321111 00 013
Q ss_pred cceeeeccCchhHHHhHh---cCCcEEecccccchhHHHHHHH-HHh--ceeeE-eec-CCccCcccCHHHHHHHHHHHh
Q 042987 361 VGGFVTHCGWNSVLEGVC---AGVPMLAWPLYAEQKMIRAVVV-EEM--KVGLA-VTR-SEEKDRLVSAAELEQRVSELM 432 (481)
Q Consensus 361 ~~~~I~HgG~gt~~eal~---~GvP~l~~P~~~DQ~~na~~v~-~~~--G~G~~-l~~-~~~~~~~~~~~~l~~~i~~~l 432 (481)
+ +|.=+|...-+-.+. .-+|+|.+|....-.-....+. =++ |+.+. +.. .. .++.-+...|. -+
T Consensus 54 V--iIa~AG~aa~Lpgvva~~t~~PVIgVP~~~~l~G~daLlS~vqmP~gvpVatV~I~~~-----~nAa~lA~~Il-~~ 125 (157)
T 2ywx_A 54 V--FIAIAGLAAHLPGVVASLTTKPVIAVPVDAKLDGLDALLSSVQMPPGIPVATVGIDRG-----ENAAILALEIL-AL 125 (157)
T ss_dssp E--EEEEEESSCCHHHHHHTTCSSCEEEEEECSSGGGHHHHHHHHSCCTTSCCEECCTTCH-----HHHHHHHHHHH-TT
T ss_pred E--EEEEcCchhhhHHHHHhccCCCEEEecCCCccCcHHHHHHHhcCCCCCeeEEEecCCc-----HHHHHHHHHHH-hc
Confidence 3 776666543333333 3589999998321111111111 121 43322 111 22 56666665554 34
Q ss_pred cCchhHHHHHHHHHHHHHHHHH
Q 042987 433 DSEKGRAVKERAVAMKEAAAAA 454 (481)
Q Consensus 433 ~~~~~~~~~~~a~~l~~~~~~~ 454 (481)
.|++ ++++.+++++++++.
T Consensus 126 ~d~~---l~~kl~~~r~~~~~~ 144 (157)
T 2ywx_A 126 KDEN---IAKKLIEYREKMKKK 144 (157)
T ss_dssp TCHH---HHHHHHHHHHHHHHH
T ss_pred CCHH---HHHHHHHHHHHHHHH
Confidence 5666 888888888887754
No 90
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=43.47 E-value=23 Score=29.98 Aligned_cols=27 Identities=4% Similarity=0.181 Sum_probs=23.5
Q ss_pred eeeeccCchhHHHhHhcCCcEEeccccc
Q 042987 363 GFVTHCGWNSVLEGVCAGVPMLAWPLYA 390 (481)
Q Consensus 363 ~~I~HgG~gt~~eal~~GvP~l~~P~~~ 390 (481)
++|+.||........ .++|+|-++..+
T Consensus 54 VIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 54 AIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp EEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred EEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 399999999999875 689999999964
No 91
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=43.45 E-value=1.5e+02 Score=28.39 Aligned_cols=138 Identities=15% Similarity=0.151 Sum_probs=73.1
Q ss_pred cEEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhc
Q 042987 278 SVLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLN 357 (481)
Q Consensus 278 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~ 357 (481)
+.|-|-+||.+ +....+++...|+..|.++=..+-+ .+-.|+.+.+ ++.+..- .
T Consensus 266 ~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~s------------aHR~p~~~~~-----------~~~~~~~-~ 319 (425)
T 2h31_A 266 CRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTS------------AHKGPDETLR-----------IKAEYEG-D 319 (425)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC------------TTTCHHHHHH-----------HHHHHHT-T
T ss_pred CeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeee------------ccCCHHHHHH-----------HHHHHHH-C
Confidence 46777778875 6677888889999999886554433 1224433221 1111110 0
Q ss_pred cc-CcceeeeccCch----hHHHhHhcCCcEEeccccc-chhHHHHHHH-HH--hceeeEeecCCccCcccCHHHHHHHH
Q 042987 358 HE-SVGGFVTHCGWN----SVLEGVCAGVPMLAWPLYA-EQKMIRAVVV-EE--MKVGLAVTRSEEKDRLVSAAELEQRV 428 (481)
Q Consensus 358 ~~-~~~~~I~HgG~g----t~~eal~~GvP~l~~P~~~-DQ~~na~~v~-~~--~G~G~~l~~~~~~~~~~~~~~l~~~i 428 (481)
.. .+ +|.=+|.. ++..++ .-+|+|.+|... .+-.. ..+. =+ -|+.+..-... .++.-++..|
T Consensus 320 g~~~v--iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~d-aLls~vqmp~g~pvatv~~~-----~nAa~~A~~I 390 (425)
T 2h31_A 320 GIPTV--FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQ-DVWSSLRLPSGLGCSTVLSP-----EGSAQFAAQI 390 (425)
T ss_dssp CCCEE--EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHH-HGGGTSSCCSSCCCEECCCH-----HHHHHHHHHH
T ss_pred CCCeE--EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHH-HHHHHhcCCCCCceEEecCc-----hHHHHHHHHH
Confidence 12 23 67666653 344443 478999999852 11111 1111 01 13332222223 5666666555
Q ss_pred HHHhcCchhHHHHHHHHHHHHHHHHH
Q 042987 429 SELMDSEKGRAVKERAVAMKEAAAAA 454 (481)
Q Consensus 429 ~~~l~~~~~~~~~~~a~~l~~~~~~~ 454 (481)
. .+.|+. ++++.+..+...+..
T Consensus 391 l-~~~~~~---l~~kl~~~~~~~~~~ 412 (425)
T 2h31_A 391 F-GLSNHL---VWSKLRASILNTWIS 412 (425)
T ss_dssp H-HTTCHH---HHHHHHHHHHHHHHH
T ss_pred H-ccCCHH---HHHHHHHHHHHHHHH
Confidence 4 446776 777777777766643
No 92
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=43.35 E-value=23 Score=28.85 Aligned_cols=37 Identities=8% Similarity=-0.021 Sum_probs=33.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
.+|++.+.++.+|-....-++..|...| ++|..+...
T Consensus 19 ~~vlla~~~gd~HdiG~~~va~~l~~~G--~eVi~lG~~ 55 (161)
T 2yxb_A 19 YKVLVAKMGLDGHDRGAKVVARALRDAG--FEVVYTGLR 55 (161)
T ss_dssp CEEEEEEESSSSCCHHHHHHHHHHHHTT--CEEECCCSB
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHCC--CEEEECCCC
Confidence 4899999999999999999999999999 999988543
No 93
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=43.04 E-value=29 Score=29.57 Aligned_cols=37 Identities=16% Similarity=0.037 Sum_probs=34.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
.+|++.+.++..|-....-++..|..+| ++|..+...
T Consensus 89 ~~vll~~~~gd~H~iG~~~va~~l~~~G--~~v~~LG~~ 125 (210)
T 1y80_A 89 GKIVLGTVKGDLHDIGKNLVAMMLESGG--FTVYNLGVD 125 (210)
T ss_dssp CEEEEEEBTTCCCCHHHHHHHHHHHHTT--CEEEECCSS
T ss_pred CEEEEEeCCCcccHHHHHHHHHHHHHCC--CEEEECCCC
Confidence 4899999999999999999999999999 999998543
No 94
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=42.76 E-value=19 Score=29.21 Aligned_cols=49 Identities=6% Similarity=-0.039 Sum_probs=35.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhc
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASV 57 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~ 57 (481)
.++++++.|+ | +.|++++++.|.++| .+|+++ .....+.. .+.+.++.+
T Consensus 24 ~~~llIaGG~-G-ItPl~sm~~~l~~~~--~~v~l~-g~r~~~d~-~~~~el~~l 72 (158)
T 3lrx_A 24 GKILAIGAYT-G-IVEVYPIAKAWQEIG--NDVTTL-HVTFEPMV-ILKEELEKA 72 (158)
T ss_dssp SEEEEEEETT-H-HHHHHHHHHHHHHHT--CEEEEE-EECBGGGC-CSHHHHHHH
T ss_pred CeEEEEEccC-c-HHHHHHHHHHHHhcC--CcEEEE-EeCCHHHh-hHHHHHHHH
Confidence 3678887655 3 999999999999998 899998 54333333 566666554
No 95
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=42.13 E-value=1.5e+02 Score=24.77 Aligned_cols=139 Identities=10% Similarity=0.025 Sum_probs=74.3
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccC-chhhHhhhcCCCeEeecc-----cch
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLL-PEGFLDRTKDRGLVVESW-----APQ 352 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~l-p~~~~~~~~~~~v~v~~~-----~p~ 352 (481)
+++.-.||..... ...+++.|.+.+..+-.++... . ...+ |..+ +... +++...-| +.|
T Consensus 11 IllgvTGs~aa~k---~~~l~~~L~~~g~~V~vv~T~~---------A-~~fi~~~~~-~~l~-~~v~~~~~~~~~~~~h 75 (194)
T 1p3y_1 11 LLIGICGSISSVG---ISSYLLYFKSFFKEIRVVMTKT---------A-EDLIPAHTV-SYFC-DHVYSEHGENGKRHSH 75 (194)
T ss_dssp EEEEECSCGGGGG---THHHHHHHTTTSSEEEEEECHH---------H-HHHSCHHHH-GGGS-SEEECTTCSSSCCCCH
T ss_pred EEEEEECHHHHHH---HHHHHHHHHHCCCEEEEEEchh---------H-HHHHHHHHH-HHhc-CCEeccccccCCCcCc
Confidence 5555567765332 3345566666677665555431 1 1112 2222 2222 22322112 345
Q ss_pred hhhhcccCcceeeeccCchhHH-------------HhHhcCCcEEecccccc----h---hHHHHHHHHHhceeeEeecC
Q 042987 353 VEVLNHESVGGFVTHCGWNSVL-------------EGVCAGVPMLAWPLYAE----Q---KMIRAVVVEEMKVGLAVTRS 412 (481)
Q Consensus 353 ~~ll~~~~~~~~I~HgG~gt~~-------------eal~~GvP~l~~P~~~D----Q---~~na~~v~~~~G~G~~l~~~ 412 (481)
.++...+|+ .+|.-|=.||+. -++..++|+|++|-..+ . -.|-.++. ++|+= .+++.
T Consensus 76 i~l~~~aD~-~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~-~~G~~-iv~p~ 152 (194)
T 1p3y_1 76 VEIGRWADI-YCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLR-KDGHI-VIEPV 152 (194)
T ss_dssp HHHHHHCSE-EEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHH-HHTCE-ECCCB
T ss_pred ccccccCCE-EEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHH-HCCCE-EECCC
Confidence 555566665 577777777654 23668899999996322 1 33677774 45763 33332
Q ss_pred Cc-----------c-CcccCHHHHHHHHHHHhcCc
Q 042987 413 EE-----------K-DRLVSAAELEQRVSELMDSE 435 (481)
Q Consensus 413 ~~-----------~-~~~~~~~~l~~~i~~~l~~~ 435 (481)
.. . ....+.++|.+.+.+.+++.
T Consensus 153 ~g~~f~lacg~~g~~g~~~~~~~iv~~v~~~l~~~ 187 (194)
T 1p3y_1 153 EIMAFEIATGTRKPNRGLITPDKALLAIEKGFKER 187 (194)
T ss_dssp CCC------------CBCCCHHHHHHHHHHHCC--
T ss_pred CCcccccccCCcCcCCCCCCHHHHHHHHHHHhccc
Confidence 21 2 23457888988888888643
No 96
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=40.15 E-value=1.8e+02 Score=26.40 Aligned_cols=112 Identities=12% Similarity=0.082 Sum_probs=59.3
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhC-CCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhc
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERS-GVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLN 357 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~ 357 (481)
+.+|+.|.+. ..++.++.+. +..++.++..+. + -...+.++.. +. ..+-...++|.
T Consensus 8 igiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~~--------~----~~~~~~~~~~---~~-~~~~~~~~ll~ 64 (330)
T 3e9m_A 8 YGIMSTAQIV-------PRFVAGLRESAQAEVRGIASRRL--------E----NAQKMAKELA---IP-VAYGSYEELCK 64 (330)
T ss_dssp EEECSCCTTH-------HHHHHHHHHSSSEEEEEEBCSSS--------H----HHHHHHHHTT---CC-CCBSSHHHHHH
T ss_pred EEEECchHHH-------HHHHHHHHhCCCcEEEEEEeCCH--------H----HHHHHHHHcC---CC-ceeCCHHHHhc
Confidence 7888888875 3456666664 455544443210 0 0011222221 10 13455677887
Q ss_pred ccCcceeeeccCch----hHHHhHhcCCcEEe-cccc--cchhHHHHHHHHHhceeeEeecCC
Q 042987 358 HESVGGFVTHCGWN----SVLEGVCAGVPMLA-WPLY--AEQKMIRAVVVEEMKVGLAVTRSE 413 (481)
Q Consensus 358 ~~~~~~~I~HgG~g----t~~eal~~GvP~l~-~P~~--~DQ~~na~~v~~~~G~G~~l~~~~ 413 (481)
.+++++++----.. .+.+|+.+|++++| -|+. .++-.-...++++.|+-+.+....
T Consensus 65 ~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~ 127 (330)
T 3e9m_A 65 DETIDIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKS 127 (330)
T ss_dssp CTTCSEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCSG
T ss_pred CCCCCEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhh
Confidence 55554466443333 36788999999887 3554 344433333445557666665543
No 97
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=40.10 E-value=35 Score=30.25 Aligned_cols=38 Identities=13% Similarity=0.051 Sum_probs=34.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTA 42 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~ 42 (481)
.+|++.+.++.+|-....-++..|..+| ++|..+....
T Consensus 124 ~~vlla~~~gd~HdiG~~iva~~L~~~G--~~Vi~LG~~v 161 (258)
T 2i2x_B 124 GTVVCHVAEGDVHDIGKNIVTALLRANG--YNVVDLGRDV 161 (258)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTT--CEEEEEEEEC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCC--CEEEECCCCC
Confidence 4899999999999999999999999999 9999886543
No 98
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=40.10 E-value=22 Score=32.64 Aligned_cols=135 Identities=13% Similarity=0.123 Sum_probs=74.6
Q ss_pred CcEEEEecCCCc---CCCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecc--cc
Q 042987 277 RSVLFLCFGSLG---SFSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESW--AP 351 (481)
Q Consensus 277 ~~~v~vs~GS~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~--~p 351 (481)
++.|.+..||.. .++.+.+.++++.|.+.+.++++..+.+ .+..+.+.+.+.. .++.+.+- +.
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~----------~e~~~~~~i~~~~--~~~~l~g~~sl~ 245 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAP----------HEEERAKRLAEGF--AYVEVLPKMSLE 245 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSH----------HHHHHHHHHHTTC--TTEEECCCCCHH
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCH----------HHHHHHHHHHhhC--CcccccCCCCHH
Confidence 347778777754 6677888888888877677766543432 0100111111111 13333332 22
Q ss_pred -hhhhhcccCcceeeec-cCchhHHHhHhcCCcEEec--ccccchhHHHHHHHHHhcee-eEeecCCccC-cccCHHHHH
Q 042987 352 -QVEVLNHESVGGFVTH-CGWNSVLEGVCAGVPMLAW--PLYAEQKMIRAVVVEEMKVG-LAVTRSEEKD-RLVSAAELE 425 (481)
Q Consensus 352 -~~~ll~~~~~~~~I~H-gG~gt~~eal~~GvP~l~~--P~~~DQ~~na~~v~~~~G~G-~~l~~~~~~~-~~~~~~~l~ 425 (481)
-..++.++++ +|+. .|...+ |.+.|+|+|++ |..... ++ -+|-. ..+.... .+ ..++++++.
T Consensus 246 el~ali~~a~l--~I~~DSG~~Hl--Aaa~g~P~v~lfg~t~p~~--~~-----P~~~~~~~~~~~~-~cm~~I~~~~V~ 313 (326)
T 2gt1_A 246 GVARVLAGAKF--VVSVDTGLSHL--TAALDRPNITVYGPTDPGL--IG-----GYGKNQMVCRAPG-NELSQLTANAVK 313 (326)
T ss_dssp HHHHHHHTCSE--EEEESSHHHHH--HHHTTCCEEEEESSSCHHH--HC-----CCSSSEEEEECGG-GCGGGCCHHHHH
T ss_pred HHHHHHHhCCE--EEecCCcHHHH--HHHcCCCEEEEECCCChhh--cC-----CCCCCceEecCCc-ccccCCCHHHHH
Confidence 3468999999 9999 444333 66699999998 321111 10 11111 1111100 01 128899999
Q ss_pred HHHHHHhcCc
Q 042987 426 QRVSELMDSE 435 (481)
Q Consensus 426 ~~i~~~l~~~ 435 (481)
+++.++|++.
T Consensus 314 ~~i~~~l~~~ 323 (326)
T 2gt1_A 314 QFIEENAEKA 323 (326)
T ss_dssp HHHHHTTTTC
T ss_pred HHHHHHHHHh
Confidence 9999999754
No 99
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=40.00 E-value=1.7e+02 Score=24.83 Aligned_cols=107 Identities=10% Similarity=0.035 Sum_probs=55.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCCe--EEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCCCCCCCCC
Q 042987 2 KDTIVFYTSPGRGHLNSMVELGKLILTYHPCF--SIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPPVSGLPDT 79 (481)
Q Consensus 2 ~~~il~~~~p~~GHv~P~l~La~~L~~~G~~h--~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~l~~~ 79 (481)
++||+|+..|+.. -+.++.++|.+.+ | +|..+.+..... ......... ++.+..++.. .
T Consensus 1 m~rI~vl~SG~g~---~~~~~l~~l~~~~--~~~~i~~Vvs~~~~~---~~~~~A~~~-----gIp~~~~~~~------~ 61 (216)
T 2ywr_A 1 MLKIGVLVSGRGS---NLQAIIDAIESGK--VNASIELVISDNPKA---YAIERCKKH-----NVECKVIQRK------E 61 (216)
T ss_dssp CEEEEEEECSCCH---HHHHHHHHHHTTS--SCEEEEEEEESCTTC---HHHHHHHHH-----TCCEEECCGG------G
T ss_pred CCEEEEEEeCCcH---HHHHHHHHHHhCC--CCCeEEEEEeCCCCh---HHHHHHHHc-----CCCEEEeCcc------c
Confidence 1479888766653 3667777888877 7 877766543321 122222332 6666554321 0
Q ss_pred CCCCCCchHHHHHHHHhhhHHHHHHHHHhhccCCccEEEECCCCc-chHHhhhhhcCCceEEEec
Q 042987 80 LRSPADFPALVYELGELNNPKLHETLITISKRSNLKAFVIDFFCN-PAFQVSSSTLSIPTYYYFT 143 (481)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~pD~VI~D~~~~-~~~~~A~~~lgiP~v~~~~ 143 (481)
.. + . ....+.+.+.+++. ++|+||+-.+.. -...+- +.+...++=+.+
T Consensus 62 ~~---~-r-------~~~~~~~~~~l~~~----~~Dliv~a~y~~il~~~~l-~~~~~~~iNiHp 110 (216)
T 2ywr_A 62 FP---S-K-------KEFEERMALELKKK----GVELVVLAGFMRILSHNFL-KYFPNKVINIHP 110 (216)
T ss_dssp SS---S-H-------HHHHHHHHHHHHHT----TCCEEEESSCCSCCCHHHH-TTSTTCEEEEES
T ss_pred cc---c-h-------hhhhHHHHHHHHhc----CCCEEEEeCchhhCCHHHH-hhccCCeEEEcC
Confidence 00 0 0 01123345566666 999999775533 233344 444444555433
No 100
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=38.67 E-value=71 Score=29.72 Aligned_cols=36 Identities=11% Similarity=0.117 Sum_probs=31.0
Q ss_pred EEEEEcC-CCccCHHHHHHHHHHHH--hCCCCeEEEEEeCC
Q 042987 4 TIVFYTS-PGRGHLNSMVELGKLIL--TYHPCFSIDIIIPT 41 (481)
Q Consensus 4 ~il~~~~-p~~GHv~P~l~La~~L~--~~G~~h~Vt~~~~~ 41 (481)
+|++++. |+-|=..-..+||..|+ ++| ++|.++...
T Consensus 19 ~i~~~~gkGGvGKTt~a~~lA~~la~~~~g--~~vllid~D 57 (348)
T 3io3_A 19 KWIFVGGKGGVGKTTTSSSVAVQLALAQPN--EQFLLISTD 57 (348)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHHHHCTT--SCEEEEECC
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHhcCC--CeEEEEECC
Confidence 4666655 88999999999999999 999 999999765
No 101
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=38.25 E-value=1.8e+02 Score=26.93 Aligned_cols=111 Identities=13% Similarity=0.045 Sum_probs=59.2
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhC-CCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhc
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERS-GVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLN 357 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~ 357 (481)
+..|++|.+.. ..++.++.+. +..++.++..+. +.. +.+.++.. + ..-+-...++|.
T Consensus 8 igiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~~--------~~~----~~~a~~~~--~--~~~~~~~~~ll~ 65 (359)
T 3m2t_A 8 VGLVGIGAQMQ------ENLLPSLLQMQDIRIVAACDSDL--------ERA----RRVHRFIS--D--IPVLDNVPAMLN 65 (359)
T ss_dssp EEEECCSHHHH------HTHHHHHHTCTTEEEEEEECSSH--------HHH----GGGGGTSC--S--CCEESSHHHHHH
T ss_pred EEEECCCHHHH------HHHHHHHHhCCCcEEEEEEcCCH--------HHH----HHHHHhcC--C--CcccCCHHHHhc
Confidence 78888888641 2355666665 556555554320 000 11111111 1 112345678888
Q ss_pred ccCcceeeeccCch----hHHHhHhcCCcEEe-ccccc--chhHHHHHHHHHhceeeEeec
Q 042987 358 HESVGGFVTHCGWN----SVLEGVCAGVPMLA-WPLYA--EQKMIRAVVVEEMKVGLAVTR 411 (481)
Q Consensus 358 ~~~~~~~I~HgG~g----t~~eal~~GvP~l~-~P~~~--DQ~~na~~v~~~~G~G~~l~~ 411 (481)
.+++++++-..-.. -+.+|+.+|++++| -|+.. ++-.-...++++.|+=+.+..
T Consensus 66 ~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~ 126 (359)
T 3m2t_A 66 QVPLDAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGVGM 126 (359)
T ss_dssp HSCCSEEEECSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCEEECC
T ss_pred CCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 77665577554433 36688999999887 36643 343333333345466555544
No 102
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=38.01 E-value=26 Score=32.10 Aligned_cols=33 Identities=24% Similarity=0.117 Sum_probs=27.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 1 MKDTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 1 m~~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
|+++|+++..+ -...++++++++| |+|.++.+.
T Consensus 1 m~m~Ililg~g------~~~~l~~a~~~~G--~~v~~~~~~ 33 (334)
T 2r85_A 1 MKVRIATYASH------SALQILKGAKDEG--FETIAFGSS 33 (334)
T ss_dssp CCSEEEEESST------THHHHHHHHHHTT--CCEEEESCG
T ss_pred CceEEEEECCh------hHHHHHHHHHhCC--CEEEEEECC
Confidence 77789999876 4678999999999 999988543
No 103
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=37.64 E-value=89 Score=26.93 Aligned_cols=46 Identities=20% Similarity=0.152 Sum_probs=30.8
Q ss_pred cchhhhhhcCCCCCcEEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEE
Q 042987 264 RHECLSWLDSKPSRSVLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLW 311 (481)
Q Consensus 264 ~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 311 (481)
.+.+.+|+... ..+++|..|+........+..+.++|++.+..++.
T Consensus 21 ~~~l~~~~~~~--~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~ 66 (229)
T 1fy2_A 21 LPLIANQLNGR--RSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTG 66 (229)
T ss_dssp HHHHHHHHTTC--CEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHhcCC--CeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEE
Confidence 44566777643 34999999975433334467788999998876543
No 104
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=37.31 E-value=2.5e+02 Score=29.60 Aligned_cols=82 Identities=15% Similarity=0.099 Sum_probs=48.1
Q ss_pred eeeccCchhHHHhHhcC-C--cEEe--cccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCchhH
Q 042987 364 FVTHCGWNSVLEGVCAG-V--PMLA--WPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSEKGR 438 (481)
Q Consensus 364 ~I~HgG~gt~~eal~~G-v--P~l~--~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~~~~ 438 (481)
++.||--+.+.|.++-. . |+-+ +|-.+.--.-...+ +. .. ++++.|.+++.+++......
T Consensus 727 ~~~gGlgsaV~ell~~r~~~~~l~v~G~~d~G~tgtp~eLl-~~---------~g-----ld~~~Iv~~a~~~l~~~~~~ 791 (845)
T 3ahc_A 727 FAYHSYAQDVRGLIYDRPNHDNFHVVGYKEQGSTTTPFDMV-RV---------ND-----MDRYALQAAALKLIDADKYA 791 (845)
T ss_dssp EEESSCHHHHHHHTTTSTTGGGEEEECCCSCCCSCCHHHHH-HT---------TT-----CSHHHHHHHHHHHHHTTTTH
T ss_pred eeecCcHHHHHHHHHhCCCCceEEEEeccCCCCCCCHHHHH-HH---------hC-----cCHHHHHHHHHHHcchhhHH
Confidence 55777777777877766 3 4444 33333211122233 22 23 89999999998888744445
Q ss_pred HHHHHHHHHHHHHHHHHhcCCC
Q 042987 439 AVKERAVAMKEAAAAAMRDGGS 460 (481)
Q Consensus 439 ~~~~~a~~l~~~~~~~~~~~g~ 460 (481)
.+++..+....+.++.+.+.|.
T Consensus 792 ~~~~~~~~~~~~~~~~~~~~g~ 813 (845)
T 3ahc_A 792 DKIDELNAFRKKAFQFAVDNGY 813 (845)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHHHhCC
Confidence 5666666666666655555554
No 105
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=37.16 E-value=86 Score=26.57 Aligned_cols=46 Identities=13% Similarity=0.024 Sum_probs=30.9
Q ss_pred hhhhhcCCCCCcEEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEE
Q 042987 267 CLSWLDSKPSRSVLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWV 312 (481)
Q Consensus 267 l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 312 (481)
+.+|+.....+.++||..+|......+.+..+.++|++.|..+.++
T Consensus 18 ~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 18 FTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 4456533333459999988765334456777899999999876543
No 106
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=37.03 E-value=70 Score=30.11 Aligned_cols=37 Identities=11% Similarity=0.077 Sum_probs=30.0
Q ss_pred CcEEEEEcC-CCccCHHHHHHHHHHHHhCCCCeEEEEEeC
Q 042987 2 KDTIVFYTS-PGRGHLNSMVELGKLILTYHPCFSIDIIIP 40 (481)
Q Consensus 2 ~~~il~~~~-p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~ 40 (481)
+++|++++. |+-|=..=..+||..|+++| .+|.++..
T Consensus 1 M~~i~~~~gkGG~GKTt~a~~la~~la~~g--~~vllvd~ 38 (374)
T 3igf_A 1 MALILTFLGKSGVARTKIAIAAAKLLASQG--KRVLLAGL 38 (374)
T ss_dssp -CEEEEEECSBHHHHHHHHHHHHHHHHHTT--CCEEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHCC--CCeEEEeC
Confidence 035666555 78889999999999999999 99999975
No 107
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=36.35 E-value=38 Score=25.33 Aligned_cols=39 Identities=10% Similarity=0.210 Sum_probs=26.9
Q ss_pred CCcEEEEEcCC--CccCHHHHHHHHHHHHhC-CCCe-EEEEEeCC
Q 042987 1 MKDTIVFYTSP--GRGHLNSMVELGKLILTY-HPCF-SIDIIIPT 41 (481)
Q Consensus 1 m~~~il~~~~p--~~GHv~P~l~La~~L~~~-G~~h-~Vt~~~~~ 41 (481)
|++-+++++.+ +.......+.+|..+.+. | | +|+++...
T Consensus 1 M~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g--~~~v~vff~~ 43 (117)
T 1jx7_A 1 MQKIVIVANGAPYGSESLFNSLRLAIALREQES--NLDLRLFLMS 43 (117)
T ss_dssp CCEEEEEECCCTTTCSHHHHHHHHHHHHHHHCT--TCEEEEEECG
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCC--CccEEEEEEc
Confidence 54444445555 334566779999999999 9 9 99888654
No 108
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=36.35 E-value=26 Score=32.15 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=26.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 1 MKDTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 1 m~~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
|+++|+++-.|+.|- .+|..|.+.| |+|+++...
T Consensus 1 M~mkI~IiGaGaiG~-----~~a~~L~~~g--~~V~~~~r~ 34 (320)
T 3i83_A 1 MSLNILVIGTGAIGS-----FYGALLAKTG--HCVSVVSRS 34 (320)
T ss_dssp --CEEEEESCCHHHH-----HHHHHHHHTT--CEEEEECST
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHhCC--CeEEEEeCC
Confidence 777899998888774 5788999999 999998643
No 109
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=36.03 E-value=1.8e+02 Score=23.80 Aligned_cols=144 Identities=18% Similarity=0.228 Sum_probs=74.5
Q ss_pred cEEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhc
Q 042987 278 SVLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLN 357 (481)
Q Consensus 278 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~ 357 (481)
|.|-|-+||.+ +....++....|+..+..+=..+-+. +-.|+.+.+ |+....- .
T Consensus 13 P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa------------HR~p~~l~~-----------~~~~a~~-~ 66 (173)
T 4grd_A 13 PLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA------------HRMPDEMFD-----------YAEKARE-R 66 (173)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------------TTSHHHHHH-----------HHHHHTT-T
T ss_pred CeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc------------ccCHHHHHH-----------HHHHHHh-c
Confidence 46777778876 66778888999999998865554332 224443321 1111110 1
Q ss_pred ccCcceeeeccCch----hHHHhHhcCCcEEecccccc---hhH-HHHHHHHHhceeeEeecCC-ccCcccCHHHHHHHH
Q 042987 358 HESVGGFVTHCGWN----SVLEGVCAGVPMLAWPLYAE---QKM-IRAVVVEEMKVGLAVTRSE-EKDRLVSAAELEQRV 428 (481)
Q Consensus 358 ~~~~~~~I~HgG~g----t~~eal~~GvP~l~~P~~~D---Q~~-na~~v~~~~G~G~~l~~~~-~~~~~~~~~~l~~~i 428 (481)
..++ +|.=.|.- ++..+ ..-+|+|.+|.... -.+ -...+ ++--|+-+..-. ..++..++.-+...|
T Consensus 67 g~~V--iIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSiv--qMP~Gvpvatv~i~~~~a~NAallA~~I 141 (173)
T 4grd_A 67 GLRA--IIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIV--QMPKGVPVATFAIGEAGAANAALFAVSI 141 (173)
T ss_dssp TCSE--EEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHH--CCCTTSCCEECCSSHHHHHHHHHHHHHH
T ss_pred CCeE--EEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHH--hCCCCCCceEEecCCcchHHHHHHHHHH
Confidence 1222 66655543 33333 45799999998543 222 11222 222232222111 000113444444444
Q ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHh
Q 042987 429 SELMDSEKGRAVKERAVAMKEAAAAAMR 456 (481)
Q Consensus 429 ~~~l~~~~~~~~~~~a~~l~~~~~~~~~ 456 (481)
. .+.|++ ++++.++++++.++.+.
T Consensus 142 L-a~~d~~---l~~kl~~~r~~~~~~v~ 165 (173)
T 4grd_A 142 L-SGNSVD---YANRLAAFRVRQNEAAH 165 (173)
T ss_dssp H-TTSCHH---HHHHHHHHHHHHHHHHH
T ss_pred H-cCCCHH---HHHHHHHHHHHHHHHHH
Confidence 3 235776 99999999988876543
No 110
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=35.98 E-value=42 Score=28.47 Aligned_cols=39 Identities=3% Similarity=-0.039 Sum_probs=31.3
Q ss_pred cEEEEEcCCCccCHH-HHHHHHHHHHhCCCCeEEEEEeCCCCC
Q 042987 3 DTIVFYTSPGRGHLN-SMVELGKLILTYHPCFSIDIIIPTAPF 44 (481)
Q Consensus 3 ~~il~~~~p~~GHv~-P~l~La~~L~~~G~~h~Vt~~~~~~~~ 44 (481)
+||++--.|+ +... -.+.|.+.|+++| ++|+++.+....
T Consensus 8 k~I~lgiTGs-~aa~~k~~~ll~~L~~~g--~eV~vv~T~~A~ 47 (201)
T 3lqk_A 8 KHVGFGLTGS-HCTYHEVLPQMERLVELG--AKVTPFVTHTVQ 47 (201)
T ss_dssp CEEEEECCSC-GGGGGGTHHHHHHHHHTT--CEEEEECSSCSC
T ss_pred CEEEEEEECh-HHHHHHHHHHHHHHhhCC--CEEEEEEChhHH
Confidence 4788877777 4555 7899999999999 999999766443
No 111
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=35.85 E-value=26 Score=32.02 Aligned_cols=34 Identities=15% Similarity=0.163 Sum_probs=26.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 1 MKDTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 1 m~~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
|.++|+++-.|+.|- .+|..|.+.| |+|++....
T Consensus 1 M~mkI~IiGaGaiG~-----~~a~~L~~~g--~~V~~~~r~ 34 (312)
T 3hn2_A 1 MSLRIAIVGAGALGL-----YYGALLQRSG--EDVHFLLRR 34 (312)
T ss_dssp ---CEEEECCSTTHH-----HHHHHHHHTS--CCEEEECST
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHHCC--CeEEEEEcC
Confidence 667899999888884 5788999999 999998643
No 112
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=35.76 E-value=2.1e+02 Score=24.44 Aligned_cols=44 Identities=7% Similarity=-0.055 Sum_probs=30.1
Q ss_pred eEeecccchh--hhhcccCcceeeeccCchhHHHhH---------hcCCcEEeccc
Q 042987 344 LVVESWAPQV--EVLNHESVGGFVTHCGWNSVLEGV---------CAGVPMLAWPL 388 (481)
Q Consensus 344 v~v~~~~p~~--~ll~~~~~~~~I~HgG~gt~~eal---------~~GvP~l~~P~ 388 (481)
+.+...++.. .+...+++ +++--||.||.-|.. .+++|++++-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 3344555533 24445554 678899999988776 57999999963
No 113
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=35.49 E-value=20 Score=28.57 Aligned_cols=31 Identities=10% Similarity=0.063 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIP 40 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~ 40 (481)
+||+++-+ |++- ..+++.|.++| |+|+++..
T Consensus 4 ~~vlI~G~---G~vG--~~la~~L~~~g--~~V~vid~ 34 (153)
T 1id1_A 4 DHFIVCGH---SILA--INTILQLNQRG--QNVTVISN 34 (153)
T ss_dssp SCEEEECC---SHHH--HHHHHHHHHTT--CCEEEEEC
T ss_pred CcEEEECC---CHHH--HHHHHHHHHCC--CCEEEEEC
Confidence 48888843 5555 68899999999 99999954
No 114
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=35.29 E-value=1.8e+02 Score=28.66 Aligned_cols=32 Identities=16% Similarity=0.213 Sum_probs=22.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
++++++ |+-.-.+.|++.|.+.| .+|..+...
T Consensus 365 KrvaI~-----gd~~~~~~la~fL~elG--m~vv~v~~~ 396 (523)
T 3u7q_B 365 KRFALW-----GDPDFVMGLVKFLLELG--CEPVHILCH 396 (523)
T ss_dssp CEEEEE-----CSHHHHHHHHHHHHHTT--CEEEEEEET
T ss_pred CEEEEE-----CCchHHHHHHHHHHHcC--CEEEEEEeC
Confidence 466666 33344567888888899 888887654
No 115
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=35.04 E-value=69 Score=29.71 Aligned_cols=37 Identities=11% Similarity=0.225 Sum_probs=31.4
Q ss_pred EEEEEcC-CCccCHHHHHHHHHHHHhCCCCeEEEEEeCCC
Q 042987 4 TIVFYTS-PGRGHLNSMVELGKLILTYHPCFSIDIIIPTA 42 (481)
Q Consensus 4 ~il~~~~-p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~ 42 (481)
+|++++. |+-|=..-..+||..|+++| ++|.++....
T Consensus 27 ~i~v~sgKGGvGKTTvA~~LA~~lA~~G--~rVLlvD~D~ 64 (349)
T 3ug7_A 27 KYIMFGGKGGVGKTTMSAATGVYLAEKG--LKVVIVSTDP 64 (349)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHSS--CCEEEEECCT
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHCC--CeEEEEeCCC
Confidence 5555554 89999999999999999999 9999997654
No 116
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=34.72 E-value=16 Score=28.70 Aligned_cols=33 Identities=15% Similarity=0.205 Sum_probs=25.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeC
Q 042987 1 MKDTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIP 40 (481)
Q Consensus 1 m~~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~ 40 (481)
|+.||+++-+|..| ..+|+.|.+.| |+|+++..
T Consensus 6 ~~~~viIiG~G~~G-----~~la~~L~~~g--~~v~vid~ 38 (140)
T 3fwz_A 6 ICNHALLVGYGRVG-----SLLGEKLLASD--IPLVVIET 38 (140)
T ss_dssp CCSCEEEECCSHHH-----HHHHHHHHHTT--CCEEEEES
T ss_pred CCCCEEEECcCHHH-----HHHHHHHHHCC--CCEEEEEC
Confidence 34588888765554 47899999999 99999954
No 117
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=34.68 E-value=35 Score=32.40 Aligned_cols=35 Identities=34% Similarity=0.615 Sum_probs=26.9
Q ss_pred hhhhhcccCcceeeeccCchhHHHhHhc----CC-cEEeccc
Q 042987 352 QVEVLNHESVGGFVTHCGWNSVLEGVCA----GV-PMLAWPL 388 (481)
Q Consensus 352 ~~~ll~~~~~~~~I~HgG~gt~~eal~~----Gv-P~l~~P~ 388 (481)
...+-..+++ +|+=||=||++.|+.. ++ |+|.+..
T Consensus 108 ~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 108 EQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp HHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred hhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 3444556777 9999999999999654 67 7998864
No 118
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=34.58 E-value=62 Score=30.15 Aligned_cols=29 Identities=17% Similarity=0.297 Sum_probs=21.5
Q ss_pred ccCcceeeec-cCchhHHHhHhcCCcEEeccc
Q 042987 358 HESVGGFVTH-CGWNSVLEGVCAGVPMLAWPL 388 (481)
Q Consensus 358 ~~~~~~~I~H-gG~gt~~eal~~GvP~l~~P~ 388 (481)
.+|+ +|+| .+.....-|-..|+|.+.+-.
T Consensus 114 ~PD~--Vv~~~~~~~~~~aa~~~giP~v~~~~ 143 (391)
T 3tsa_A 114 RPSV--LLVDVCALIGRVLGGLLDLPVVLHRW 143 (391)
T ss_dssp CCSE--EEEETTCHHHHHHHHHTTCCEEEECC
T ss_pred CCCE--EEeCcchhHHHHHHHHhCCCEEEEec
Confidence 5776 6666 566666777889999998854
No 119
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=34.53 E-value=63 Score=28.94 Aligned_cols=39 Identities=13% Similarity=-0.044 Sum_probs=28.3
Q ss_pred CCcEEEEEcCCCcc-CHH---HHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 1 MKDTIVFYTSPGRG-HLN---SMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 1 m~~~il~~~~p~~G-Hv~---P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
|+++|+++..+... |-. -...++++|.++| |+|..+...
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G--~~v~~~~~~ 43 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGG--IDAYPVDPK 43 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTT--CEEEEECTT
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCC--CeEEEEecC
Confidence 77899999865432 222 3357999999999 999998543
No 120
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=34.46 E-value=2.8e+02 Score=25.59 Aligned_cols=111 Identities=15% Similarity=0.079 Sum_probs=62.6
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcc
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNH 358 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~ 358 (481)
+..|+.|.+. ...++.++...+..++.++... .. ..+.+.++.. . ..-|-...++|..
T Consensus 29 vgiiG~G~~~------~~~~~~~~~~~~~~lvav~d~~----------~~--~a~~~a~~~~--~--~~~~~~~~~ll~~ 86 (361)
T 3u3x_A 29 FAAVGLNHNH------IYGQVNCLLRAGARLAGFHEKD----------DA--LAAEFSAVYA--D--ARRIATAEEILED 86 (361)
T ss_dssp EEEECCCSTT------HHHHHHHHHHTTCEEEEEECSC----------HH--HHHHHHHHSS--S--CCEESCHHHHHTC
T ss_pred EEEECcCHHH------HHHHHHHhhcCCcEEEEEEcCC----------HH--HHHHHHHHcC--C--CcccCCHHHHhcC
Confidence 8899988753 2234455555777877666432 00 0012222221 1 1134567888888
Q ss_pred cCcceeeeccCch----hHHHhHhcCCcEEe-ccccc--chhHHHHHHHHHhceeeEeec
Q 042987 359 ESVGGFVTHCGWN----SVLEGVCAGVPMLA-WPLYA--EQKMIRAVVVEEMKVGLAVTR 411 (481)
Q Consensus 359 ~~~~~~I~HgG~g----t~~eal~~GvP~l~-~P~~~--DQ~~na~~v~~~~G~G~~l~~ 411 (481)
+++++++--.-.. .+.+||.+|++++| -|+.. ++-.-...++++.|+=+.+..
T Consensus 87 ~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~v~~ 146 (361)
T 3u3x_A 87 ENIGLIVSAAVSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFSILY 146 (361)
T ss_dssp TTCCEEEECCCHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCEEEEC
T ss_pred CCCCEEEEeCChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 7666677544333 46789999999999 67743 343333333344466555554
No 121
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=34.40 E-value=1.9e+02 Score=23.75 Aligned_cols=144 Identities=17% Similarity=0.231 Sum_probs=76.0
Q ss_pred cEEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHh---hhcCCCeEeecccchhh
Q 042987 278 SVLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLD---RTKDRGLVVESWAPQVE 354 (481)
Q Consensus 278 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~---~~~~~~v~v~~~~p~~~ 354 (481)
+.|-|-+||.+ +.+.+++..+.|++++..+-..+-+. .-.|+.+.+ ....+++
T Consensus 23 p~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA------------HRtp~~l~~~~~~a~~~g~---------- 78 (181)
T 4b4k_A 23 SLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA------------HRTPDYMFEYAETARERGL---------- 78 (181)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------------TTSHHHHHHHHHHTTTTTC----------
T ss_pred ccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc------------ccChHHHHHHHHHHHhcCc----------
Confidence 36777789876 66678889999999998865555432 223443321 1111222
Q ss_pred hhcccCcceeeeccCchhHHHh---HhcCCcEEecccccc---hhHHHHHHHHHhceeeEeecCC-ccCcccCHHHHHHH
Q 042987 355 VLNHESVGGFVTHCGWNSVLEG---VCAGVPMLAWPLYAE---QKMIRAVVVEEMKVGLAVTRSE-EKDRLVSAAELEQR 427 (481)
Q Consensus 355 ll~~~~~~~~I~HgG~gt~~ea---l~~GvP~l~~P~~~D---Q~~na~~v~~~~G~G~~l~~~~-~~~~~~~~~~l~~~ 427 (481)
+++|.=.|.-.-+-. -..-+|+|.+|.... -.+.-.-+. ++--|+-+..-. ...+..++.-+...
T Consensus 79 -------~ViIa~AG~aahLpGvvAa~T~~PVIGVPv~s~~l~G~DsLlSiv-QMP~GvpVaTvaig~~ga~NAallA~q 150 (181)
T 4b4k_A 79 -------KVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIV-QMPGGVPVATVAIGKAGSTNAGLLAAQ 150 (181)
T ss_dssp -------CEEEEEECSSCCHHHHHHTTCCSCEEEEECCCTTTTTHHHHHHHH-TCCTTCCCEECCSSHHHHHHHHHHHHH
T ss_pred -------eEEEEeccccccchhhHHhcCCCCEEEEecCCCCccchhhHHHHH-hCCCCCceEEEecCCccHHHHHHHHHH
Confidence 226666554422222 245689999999643 222222222 333344333222 00001233334333
Q ss_pred HHHHhcCchhHHHHHHHHHHHHHHHHHHhc
Q 042987 428 VSELMDSEKGRAVKERAVAMKEAAAAAMRD 457 (481)
Q Consensus 428 i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~ 457 (481)
|.. +.|++ ++++.+.+++.+++.+.+
T Consensus 151 ILa-~~d~~---l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 151 ILG-SFHDD---IHDALELRREAIEKDVRE 176 (181)
T ss_dssp HHT-TTCHH---HHHHHHHHHHHHHHHHHH
T ss_pred HHc-cCCHH---HHHHHHHHHHHHHHHHHH
Confidence 322 34666 888888888888765443
No 122
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=34.10 E-value=1.9e+02 Score=23.45 Aligned_cols=141 Identities=15% Similarity=0.211 Sum_probs=73.6
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcc
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNH 358 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~ 358 (481)
.|-|-+||.+ +.+..++....|+..+.++=..+-+. +-.|+.+.+ |+.... -..
T Consensus 5 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa------------HR~p~~~~~-----------~~~~a~-~~g 58 (163)
T 3ors_A 5 KVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSA------------HRTPKMMVQ-----------FASEAR-ERG 58 (163)
T ss_dssp CEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------------TTSHHHHHH-----------HHHHTT-TTT
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECC------------cCCHHHHHH-----------HHHHHH-hCC
Confidence 4555567765 66778888889999988865544331 224443321 111000 012
Q ss_pred cCcceeeeccCchhHHHhH---hcCCcEEecccccchh--HHH--HHHHHHhceee--E-eecCCccCcccCHHHHHHHH
Q 042987 359 ESVGGFVTHCGWNSVLEGV---CAGVPMLAWPLYAEQK--MIR--AVVVEEMKVGL--A-VTRSEEKDRLVSAAELEQRV 428 (481)
Q Consensus 359 ~~~~~~I~HgG~gt~~eal---~~GvP~l~~P~~~DQ~--~na--~~v~~~~G~G~--~-l~~~~~~~~~~~~~~l~~~i 428 (481)
.++ +|.=+|...-+-++ ..-+|+|.+|....-. ..+ ..+ ++--|+ . +...+ .+..++.-+...|
T Consensus 59 ~~V--iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~v--qmp~GvPVatV~I~~--a~~~nAa~lAa~I 132 (163)
T 3ors_A 59 INI--IIAGAGGAAHLPGMVASLTTLPVIGVPIETKSLKGIDSLLSIV--QMPGGIPVATTAIGA--AGAKNAGILAARM 132 (163)
T ss_dssp CCE--EEEEEESSCCHHHHHHHHCSSCEEEEEECCTTTTTHHHHHHHH--TCCTTSCCEECCSTH--HHHHHHHHHHHHH
T ss_pred CcE--EEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHHh--hCCCCCceEEEEcCC--cccHHHHHHHHHH
Confidence 233 77766654333332 2568999999854311 111 112 122332 2 12210 0014555555555
Q ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHH
Q 042987 429 SELMDSEKGRAVKERAVAMKEAAAAAM 455 (481)
Q Consensus 429 ~~~l~~~~~~~~~~~a~~l~~~~~~~~ 455 (481)
..+ .|+. ++++.+++++++++.+
T Consensus 133 l~~-~d~~---l~~kl~~~r~~~~~~v 155 (163)
T 3ors_A 133 LSI-QNPS---LVEKLNQYESSLIQKV 155 (163)
T ss_dssp HHT-TCTH---HHHHHHHHHHHHHHHH
T ss_pred HhC-CCHH---HHHHHHHHHHHHHHHH
Confidence 433 5676 9999999988887543
No 123
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=33.77 E-value=20 Score=30.64 Aligned_cols=33 Identities=12% Similarity=0.124 Sum_probs=24.3
Q ss_pred CccEEE-ECCCCc-chHHhhhhhcCCceEEEeccch
Q 042987 113 NLKAFV-IDFFCN-PAFQVSSSTLSIPTYYYFTTAG 146 (481)
Q Consensus 113 ~pD~VI-~D~~~~-~~~~~A~~~lgiP~v~~~~~~~ 146 (481)
.||+|| .|+..- -++.-| .++|||+|.++-+.+
T Consensus 115 ~PdlliV~Dp~~e~~ai~EA-~~l~IPvIalvDTn~ 149 (208)
T 1vi6_A 115 EPEVVFVNDPAIDKQAVSEA-TAVGIPVVALCDSNN 149 (208)
T ss_dssp CCSEEEESCTTTTHHHHHHH-HHTTCCEEEEECTTC
T ss_pred CCCEEEEECCCcchhHHHHH-HHhCCCEEEEeCCCC
Confidence 789877 565433 356678 999999999987543
No 124
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=33.65 E-value=52 Score=27.79 Aligned_cols=35 Identities=9% Similarity=0.121 Sum_probs=29.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhC-CCCeEEEEEeCC
Q 042987 4 TIVFYTSPGRGHLNSMVELGKLILTY-HPCFSIDIIIPT 41 (481)
Q Consensus 4 ~il~~~~p~~GHv~P~l~La~~L~~~-G~~h~Vt~~~~~ 41 (481)
||++--.|+.|-.. ...|.+.|+++ | ++|.++.+.
T Consensus 2 ~IllgvTGsiaa~k-~~~ll~~L~~~~g--~~V~vv~T~ 37 (197)
T 1sbz_A 2 KLIVGMTGATGAPL-GVALLQALREMPN--VETHLVMSK 37 (197)
T ss_dssp EEEEEECSSSCHHH-HHHHHHHHHTCTT--CEEEEEECH
T ss_pred EEEEEEeChHHHHH-HHHHHHHHHhccC--CEEEEEECc
Confidence 58888878877655 99999999999 9 999999765
No 125
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=33.41 E-value=57 Score=27.91 Aligned_cols=39 Identities=10% Similarity=-0.010 Sum_probs=35.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAP 43 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~ 43 (481)
.+|++.+.++..|-....-++..|..+| ++|+.+....+
T Consensus 93 ~~vll~~v~gd~HdiG~~iv~~~l~~~G--~~Vi~LG~~vp 131 (215)
T 3ezx_A 93 GLAITFVAEGDIHDIGHRLVTTMLGANG--FQIVDLGVDVL 131 (215)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTS--CEEEECCSSCC
T ss_pred CeEEEEeCCCChhHHHHHHHHHHHHHCC--CeEEEcCCCCC
Confidence 4899999999999999999999999999 99999865433
No 126
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=33.41 E-value=2e+02 Score=23.56 Aligned_cols=145 Identities=18% Similarity=0.225 Sum_probs=75.9
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcc
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNH 358 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~ 358 (481)
.|-|-+||.+ +.+..++....|+..+.++=..+-+. +-.|+.+.+ |+.... -..
T Consensus 14 ~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~Sa------------HR~p~~~~~-----------~~~~a~-~~g 67 (174)
T 3kuu_A 14 KIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSA------------HRTPDRLFS-----------FAEQAE-ANG 67 (174)
T ss_dssp CEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------------TTCHHHHHH-----------HHHHTT-TTT
T ss_pred cEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc------------cCCHHHHHH-----------HHHHHH-hCC
Confidence 4555567765 66778888889999998865554331 224443321 111100 012
Q ss_pred cCcceeeeccCchhHHHhHh---cCCcEEecccccc-hhHHHHHHH-HHh--ceeeE-eecCCccCcccCHHHHHHHHHH
Q 042987 359 ESVGGFVTHCGWNSVLEGVC---AGVPMLAWPLYAE-QKMIRAVVV-EEM--KVGLA-VTRSEEKDRLVSAAELEQRVSE 430 (481)
Q Consensus 359 ~~~~~~I~HgG~gt~~eal~---~GvP~l~~P~~~D-Q~~na~~v~-~~~--G~G~~-l~~~~~~~~~~~~~~l~~~i~~ 430 (481)
.++ +|.=+|...-+-++. .-+|+|.+|...- -.-....+. -++ |+.+. +...+ .+..++.-+...|..
T Consensus 68 ~~V--iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~--a~~~nAa~lAa~ILa 143 (174)
T 3kuu_A 68 LHV--IIAGNGGAAHLPGMLAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGK--AGAANAALLAAQILA 143 (174)
T ss_dssp CSE--EEEEEESSCCHHHHHHHTCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSH--HHHHHHHHHHHHHHH
T ss_pred CcE--EEEECChhhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCC--ccchHHHHHHHHHHc
Confidence 233 777766544333333 3589999998532 111111111 012 43222 11110 001455555555543
Q ss_pred HhcCchhHHHHHHHHHHHHHHHHHHhc
Q 042987 431 LMDSEKGRAVKERAVAMKEAAAAAMRD 457 (481)
Q Consensus 431 ~l~~~~~~~~~~~a~~l~~~~~~~~~~ 457 (481)
+.|+. ++++.+++++++++.+.+
T Consensus 144 -~~d~~---l~~kl~~~r~~~~~~v~~ 166 (174)
T 3kuu_A 144 -LHDTE---LAGRLAHWRQSQTDDVLD 166 (174)
T ss_dssp -TTCHH---HHHHHHHHHHHHHHHHHT
T ss_pred -CCCHH---HHHHHHHHHHHHHHHHHh
Confidence 35776 999999999988866544
No 127
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=33.37 E-value=1.3e+02 Score=26.55 Aligned_cols=31 Identities=10% Similarity=0.094 Sum_probs=24.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEe
Q 042987 4 TIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIII 39 (481)
Q Consensus 4 ~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~ 39 (481)
+++++|.++.| =-.++|++|.++| ++|.++.
T Consensus 25 k~~lVTGas~G---IG~aia~~la~~G--~~V~~~~ 55 (279)
T 3sju_A 25 QTAFVTGVSSG---IGLAVARTLAARG--IAVYGCA 55 (279)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CEEEEeCCCCH---HHHHHHHHHHHCC--CEEEEEe
Confidence 67888876654 3467899999999 9998874
No 128
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=33.19 E-value=21 Score=31.64 Aligned_cols=54 Identities=17% Similarity=0.271 Sum_probs=37.6
Q ss_pred ccCcceeeeccCchhHHHhHhc---CCcEEecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcC
Q 042987 358 HESVGGFVTHCGWNSVLEGVCA---GVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDS 434 (481)
Q Consensus 358 ~~~~~~~I~HgG~gt~~eal~~---GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~ 434 (481)
.+++ +|+=||=||+++++.. ++|.+.++... +|. .- + +.++++.++++.++++
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G~------------~Gf--l~---~-----~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAGR------------LGF--LT---S-----YTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEESSS------------CCS--SC---C-----BCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECCC------------CCc--cC---c-----CCHHHHHHHHHHHHcC
Confidence 4555 9999999999999887 89999986321 111 11 2 4567777777777764
Q ss_pred c
Q 042987 435 E 435 (481)
Q Consensus 435 ~ 435 (481)
.
T Consensus 97 ~ 97 (258)
T 1yt5_A 97 N 97 (258)
T ss_dssp C
T ss_pred C
Confidence 3
No 129
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=32.72 E-value=2.3e+02 Score=27.94 Aligned_cols=34 Identities=6% Similarity=0.028 Sum_probs=26.0
Q ss_pred HHHHHHHHhhccCCccEEEECCCCcchHHhhhhhc-------CCceEEE
Q 042987 100 KLHETLITISKRSNLKAFVIDFFCNPAFQVSSSTL-------SIPTYYY 141 (481)
Q Consensus 100 ~~~~ll~~~~~~~~pD~VI~D~~~~~~~~~A~~~l-------giP~v~~ 141 (481)
.+++++++. +||++|.+. .+..+| +++ |||++.+
T Consensus 425 ~l~~~i~~~----~pDLiig~~---~~~~~a-~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 425 HFRSLMFTR----QPDFMIGNS---YGKFIQ-RDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHHHH----CCSEEEECG---GGHHHH-HHHHHHCGGGCCCEEEC
T ss_pred HHHHHHhhc----CCCEEEECc---chHHHH-HHhhcccccCCCCeEEe
Confidence 455666776 999999984 346678 888 9999875
No 130
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=32.69 E-value=2.2e+02 Score=23.74 Aligned_cols=42 Identities=7% Similarity=-0.088 Sum_probs=28.4
Q ss_pred eecccchh--hhhcccCcceeeeccCchhHHHhH---------hcCCcEEeccc
Q 042987 346 VESWAPQV--EVLNHESVGGFVTHCGWNSVLEGV---------CAGVPMLAWPL 388 (481)
Q Consensus 346 v~~~~p~~--~ll~~~~~~~~I~HgG~gt~~eal---------~~GvP~l~~P~ 388 (481)
++++.... .++.++++ .++--||.||.-|.. .+++|++++-.
T Consensus 94 ~~~~~~~Rk~~m~~~sda-~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~ 146 (189)
T 3sbx_A 94 VTETMWERKQVMEDRANA-FITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDP 146 (189)
T ss_dssp EESSHHHHHHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred EcCCHHHHHHHHHHHCCE-EEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecC
Confidence 34555433 34555554 677889999998874 36999999843
No 131
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=32.49 E-value=20 Score=31.50 Aligned_cols=33 Identities=18% Similarity=0.223 Sum_probs=24.5
Q ss_pred CccEEE-ECCCCc-chHHhhhhhcCCceEEEeccch
Q 042987 113 NLKAFV-IDFFCN-PAFQVSSSTLSIPTYYYFTTAG 146 (481)
Q Consensus 113 ~pD~VI-~D~~~~-~~~~~A~~~lgiP~v~~~~~~~ 146 (481)
.||+|| .|...- -++.-| .++|||+|.++-+.+
T Consensus 151 ~PdlliV~Dp~~e~~AI~EA-~~lgIPvIalvDTn~ 185 (253)
T 3bch_A 151 EPRLLVVTDPRADHQPLTEA-SYVNLPTIALCNTDS 185 (253)
T ss_dssp SCSEEEESCTTTTHHHHHHH-HHTTCCEEEEECTTC
T ss_pred CCCEEEEECCCccchHHHHH-HHhCCCEEEEEcCCC
Confidence 689887 565443 355678 999999999987554
No 132
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=32.43 E-value=30 Score=27.31 Aligned_cols=49 Identities=4% Similarity=-0.093 Sum_probs=34.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhc
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASV 57 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~ 57 (481)
+++++++.|+ =+.|++.+++.|.++| .+|+++ .....+.. .+.+.++.+
T Consensus 19 ~~~llIaGG~--GiaPl~sm~~~l~~~~--~~v~l~-g~R~~~~~-~~~~el~~l 67 (142)
T 3lyu_A 19 GKILAIGAYT--GIVEVYPIAKAWQEIG--NDVTTL-HVTFEPMV-ILKEELEKA 67 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHHTT--CEEEEE-EEEEGGGC-CSHHHHHTT
T ss_pred CeEEEEECcC--cHHHHHHHHHHHHhcC--CcEEEE-EeCCHHHh-hHHHHHHHH
Confidence 3677877655 3899999999999999 889988 43333333 455555543
No 133
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=32.19 E-value=78 Score=26.63 Aligned_cols=38 Identities=13% Similarity=0.163 Sum_probs=29.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 1 MKDTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 1 m~~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
|+++|+++.+++. ...=+......|.+.| ++|+++++.
T Consensus 1 M~~kV~ill~~g~-~~~e~~~~~~~l~~ag--~~v~~vs~~ 38 (205)
T 2ab0_A 1 MSASALVCLAPGS-EETEAVTTIDLLVRGG--IKVTTASVA 38 (205)
T ss_dssp -CCEEEEEECTTC-CHHHHHHHHHHHHHTT--CEEEEEECS
T ss_pred CCcEEEEEEcCCC-cHHHHHHHHHHHHHCC--CEEEEEeCC
Confidence 6678999998766 4556667778899999 999999765
No 134
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=31.45 E-value=38 Score=30.35 Aligned_cols=31 Identities=13% Similarity=0.295 Sum_probs=23.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeC
Q 042987 4 TIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIP 40 (481)
Q Consensus 4 ~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~ 40 (481)
||++. |+.|.+- -.|+++|.++| |+|+.++-
T Consensus 2 kILVT--GatGfIG--~~L~~~L~~~G--~~V~~l~R 32 (298)
T 4b4o_A 2 RVLVG--GGTGFIG--TALTQLLNARG--HEVTLVSR 32 (298)
T ss_dssp EEEEE--TTTSHHH--HHHHHHHHHTT--CEEEEEES
T ss_pred EEEEE--CCCCHHH--HHHHHHHHHCC--CEEEEEEC
Confidence 35543 6778775 46789999999 99999864
No 135
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=31.31 E-value=42 Score=29.75 Aligned_cols=33 Identities=15% Similarity=0.104 Sum_probs=24.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeC
Q 042987 1 MKDTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIP 40 (481)
Q Consensus 1 m~~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~ 40 (481)
|+++|+++ |+ |.+- ..|+++|.++| |+|+.++-
T Consensus 4 m~~~ilVt--Ga-G~iG--~~l~~~L~~~g--~~V~~~~r 36 (286)
T 3ius_A 4 MTGTLLSF--GH-GYTA--RVLSRALAPQG--WRIIGTSR 36 (286)
T ss_dssp -CCEEEEE--TC-CHHH--HHHHHHHGGGT--CEEEEEES
T ss_pred CcCcEEEE--CC-cHHH--HHHHHHHHHCC--CEEEEEEc
Confidence 55677666 36 7665 46789999999 99999864
No 136
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=31.31 E-value=89 Score=25.79 Aligned_cols=39 Identities=8% Similarity=0.146 Sum_probs=30.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCC
Q 042987 1 MKDTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTA 42 (481)
Q Consensus 1 m~~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~ 42 (481)
|++||+++-+++. ...=+......|++.| ++|+++++..
T Consensus 4 m~kkv~ill~~g~-~~~e~~~~~~~l~~ag--~~v~~~s~~~ 42 (190)
T 4e08_A 4 MSKSALVILAPGA-EEMEFIIAADVLRRAG--IKVTVAGLNG 42 (190)
T ss_dssp CCCEEEEEECTTC-CHHHHHHHHHHHHHTT--CEEEEEESSS
T ss_pred CCcEEEEEECCCc-hHHHHHHHHHHHHHCC--CEEEEEECCC
Confidence 7778999888766 4455566778899999 9999998653
No 137
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=31.30 E-value=15 Score=31.94 Aligned_cols=33 Identities=24% Similarity=0.219 Sum_probs=24.0
Q ss_pred CccEEE-ECCCCc-chHHhhhhhcCCceEEEeccch
Q 042987 113 NLKAFV-IDFFCN-PAFQVSSSTLSIPTYYYFTTAG 146 (481)
Q Consensus 113 ~pD~VI-~D~~~~-~~~~~A~~~lgiP~v~~~~~~~ 146 (481)
.||+|| .|+..- -++.-| .++|||+|.++-+.+
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA-~~l~IPvIaivDTn~ 191 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALREC-ITLGIPTICLIDTNC 191 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHH-HTTTCCEEECCCSSS
T ss_pred CCCEEEEeCCccccHHHHHH-HHhCCCEEEEecCCC
Confidence 599987 565433 356678 999999999876543
No 138
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=31.26 E-value=55 Score=33.96 Aligned_cols=115 Identities=12% Similarity=0.115 Sum_probs=75.2
Q ss_pred eecccchhhhhcccCcceeeeccCchhHHHhHhcCCcEEecccccchhHHHHHHHHHhceeeEeecCC--ccCcccCHHH
Q 042987 346 VESWAPQVEVLNHESVGGFVTHCGWNSVLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSE--EKDRLVSAAE 423 (481)
Q Consensus 346 v~~~~p~~~ll~~~~~~~~I~HgG~gt~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~--~~~~~~~~~~ 423 (481)
+.++.+-.++|..+|+ +||=- .+.+.|.+..++|+|....-.|++.. + --|...+..+ -.+-.-+.++
T Consensus 603 ~~~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~-----~--~rg~y~d~~~~~pg~~~~~~~e 672 (729)
T 3l7i_A 603 VSNYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDK-----G--LRGFYMNYMEDLPGPIYTEPYG 672 (729)
T ss_dssp CTTCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTS-----S--CCSBSSCTTSSSSSCEESSHHH
T ss_pred CCCCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhh-----c--cCCcccChhHhCCCCeECCHHH
Confidence 4456667789999998 99873 45777999999999999877666532 1 1233333211 0011246788
Q ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 042987 424 LEQRVSELMDSEKGRAVKERAVAMKEAAAAAMRDGGSSRVALDNLVESFK 473 (481)
Q Consensus 424 l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 473 (481)
|.++|.+...+. ..++++.+++.+++-.. ++|.++.+.++.+++...
T Consensus 673 L~~~i~~~~~~~--~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 673 LAKELKNLDKVQ--QQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHHHHTTHHHHH--HHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhccc--hhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCc
Confidence 888888776432 23777777777776543 456666667777776654
No 139
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=31.19 E-value=1.7e+02 Score=22.57 Aligned_cols=50 Identities=12% Similarity=0.072 Sum_probs=32.9
Q ss_pred hcCCcEEecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHhcCc
Q 042987 378 CAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELMDSE 435 (481)
Q Consensus 378 ~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~ 435 (481)
...+|+|++--..+.......+ ..|+--.+.+ . ++.++|..+|..++...
T Consensus 73 ~~~~pii~ls~~~~~~~~~~~~--~~g~~~~l~k-P-----~~~~~L~~~i~~~~~~~ 122 (155)
T 1qkk_A 73 DPDLPMILVTGHGDIPMAVQAI--QDGAYDFIAK-P-----FAADRLVQSARRAEEKR 122 (155)
T ss_dssp CTTSCEEEEECGGGHHHHHHHH--HTTCCEEEES-S-----CCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHH--hcCCCeEEeC-C-----CCHHHHHHHHHHHHHHH
Confidence 3578999886655544333333 3476555544 3 78999999999998644
No 140
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=30.73 E-value=75 Score=28.78 Aligned_cols=26 Identities=15% Similarity=0.069 Sum_probs=22.8
Q ss_pred eeeccCchhHHHhHh------cCCcEEecccc
Q 042987 364 FVTHCGWNSVLEGVC------AGVPMLAWPLY 389 (481)
Q Consensus 364 ~I~HgG~gt~~eal~------~GvP~l~~P~~ 389 (481)
+|.-||=||+.|++. .++|+.++|..
T Consensus 67 vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 67 IIVFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp EEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred EEEEccchHHHHHHHHHhhCCCCCcEEEecCC
Confidence 999999999999864 57999999983
No 141
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=30.70 E-value=32 Score=31.71 Aligned_cols=32 Identities=6% Similarity=0.065 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEe
Q 042987 1 MKDTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIII 39 (481)
Q Consensus 1 m~~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~ 39 (481)
|+++|.|+-.|..| ..+|..|.+.| |+|++..
T Consensus 13 ~~~kI~iIG~G~mG-----~ala~~L~~~G--~~V~~~~ 44 (335)
T 1z82_A 13 MEMRFFVLGAGSWG-----TVFAQMLHENG--EEVILWA 44 (335)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTT--CEEEEEC
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHhCC--CeEEEEe
Confidence 66789999888777 57899999999 9999984
No 142
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=30.54 E-value=27 Score=31.60 Aligned_cols=32 Identities=9% Similarity=0.094 Sum_probs=25.8
Q ss_pred hhcccCcceeeeccCchhHHHhHhc----CCcEEeccc
Q 042987 355 VLNHESVGGFVTHCGWNSVLEGVCA----GVPMLAWPL 388 (481)
Q Consensus 355 ll~~~~~~~~I~HgG~gt~~eal~~----GvP~l~~P~ 388 (481)
+-..+++ +|.=||=||+++++.. ++|.+.++.
T Consensus 60 ~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 60 IGQQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 3345666 9999999999999843 899999974
No 143
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=30.12 E-value=24 Score=32.26 Aligned_cols=32 Identities=16% Similarity=0.196 Sum_probs=24.3
Q ss_pred hhcccCcceeeeccCchhHHHhHhc----CCcEEeccc
Q 042987 355 VLNHESVGGFVTHCGWNSVLEGVCA----GVPMLAWPL 388 (481)
Q Consensus 355 ll~~~~~~~~I~HgG~gt~~eal~~----GvP~l~~P~ 388 (481)
....+++ +|.-||=||+++++.. ++|++.++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3345666 9999999999999864 899999974
No 144
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=30.11 E-value=64 Score=25.10 Aligned_cols=36 Identities=6% Similarity=0.063 Sum_probs=27.1
Q ss_pred EEE-EEcCC--CccCHHHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 4 TIV-FYTSP--GRGHLNSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 4 ~il-~~~~p--~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
+++ +++.+ +......-+.||...++.| |+|+++...
T Consensus 17 kl~ii~~sgP~~~~~~~~al~lA~~A~a~g--~eV~vFf~~ 55 (134)
T 3mc3_A 17 XILIVVTHGPEDLDRTYAPLFMASISASME--YETSVFFMI 55 (134)
T ss_dssp EEEEEECCCGGGTHHHHHHHHHHHHHHHTT--CEEEEEECT
T ss_pred eEEEEEccCCCCHHHHHHHHHHHHHHHHCC--CCEEEEEEe
Confidence 444 44445 4667788899999999999 999988654
No 145
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=30.06 E-value=1e+02 Score=28.58 Aligned_cols=34 Identities=21% Similarity=0.295 Sum_probs=23.7
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEe
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVR 314 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~ 314 (481)
++++++|+... ..-+..++++|.+.|.++.+.+.
T Consensus 7 il~~~~~~~Gh--v~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 7 ILFANVQGHGH--VYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp EEEECCSSHHH--HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEeCCCCcc--cccHHHHHHHHHhCCCEEEEEcC
Confidence 77777775432 22355688888888998888764
No 146
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=29.66 E-value=1.5e+02 Score=24.69 Aligned_cols=42 Identities=10% Similarity=0.017 Sum_probs=28.6
Q ss_pred eecccchh-h-hhcccCcceeeeccCchhHHHh---H------hcCCcEEeccc
Q 042987 346 VESWAPQV-E-VLNHESVGGFVTHCGWNSVLEG---V------CAGVPMLAWPL 388 (481)
Q Consensus 346 v~~~~p~~-~-ll~~~~~~~~I~HgG~gt~~ea---l------~~GvP~l~~P~ 388 (481)
+....+.. . +...++ .+++--||.||.-|. + .+++|++++-.
T Consensus 83 ~~~~~~~Rk~~~~~~sd-a~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 83 EVNGMHERKAKMSELAD-GFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp EESHHHHHHHHHHHHCS-EEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred cCCCHHHHHHHHHHHCC-EEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 34555543 3 444444 578889999998765 5 38899999964
No 147
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=29.62 E-value=3e+02 Score=26.27 Aligned_cols=34 Identities=18% Similarity=0.218 Sum_probs=23.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCCeEEEEEeCC
Q 042987 1 MKDTIVFYTSPGRGHLNSMVELGKLILTY-HPCFSIDIIIPT 41 (481)
Q Consensus 1 m~~~il~~~~p~~GHv~P~l~La~~L~~~-G~~h~Vt~~~~~ 41 (481)
|+++|+++..++ ...+|++.|+++ | ++++++.+.
T Consensus 23 m~~~IlIlG~g~-----r~~al~~~~a~~~g--~~~v~~~~~ 57 (452)
T 2qk4_A 23 MAARVLIIGSGG-----REHTLAWKLAQSHH--VKQVLVAPG 57 (452)
T ss_dssp CSEEEEEEECSH-----HHHHHHHHHTTCTT--EEEEEEEEC
T ss_pred cCcEEEEECCCH-----HHHHHHHHHHhcCC--CCEEEEECC
Confidence 556899987763 356788888654 7 887777543
No 148
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=29.44 E-value=21 Score=31.23 Aligned_cols=33 Identities=15% Similarity=0.227 Sum_probs=24.1
Q ss_pred CccEEE-ECCCCc-chHHhhhhhcCCceEEEeccch
Q 042987 113 NLKAFV-IDFFCN-PAFQVSSSTLSIPTYYYFTTAG 146 (481)
Q Consensus 113 ~pD~VI-~D~~~~-~~~~~A~~~lgiP~v~~~~~~~ 146 (481)
.||+|| .|...- -++.-| .++|||+|.++-+.+
T Consensus 114 ~PdlliV~Dp~~e~~ai~EA-~~l~IPvIalvDTn~ 148 (241)
T 2xzm_B 114 EPRVLIVTDPRSDFQAIKEA-SYVNIPVIALCDSDS 148 (241)
T ss_dssp CCSEEEESCTTTTHHHHHHH-TTTTCCEEECCCSSS
T ss_pred CCCEEEEECCCcchHHHHHH-HHhCCCEEEEecCCC
Confidence 689887 565433 356678 999999999876543
No 149
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=29.06 E-value=1.2e+02 Score=27.73 Aligned_cols=29 Identities=17% Similarity=0.089 Sum_probs=23.8
Q ss_pred cCcceeeeccCchhHHHhHh------cCCcEEecccc
Q 042987 359 ESVGGFVTHCGWNSVLEGVC------AGVPMLAWPLY 389 (481)
Q Consensus 359 ~~~~~~I~HgG~gt~~eal~------~GvP~l~~P~~ 389 (481)
+++ +|.=||=||+.|++. .++|+.++|..
T Consensus 81 ~d~--vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~G 115 (337)
T 2qv7_A 81 YDV--LIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMG 115 (337)
T ss_dssp CSE--EEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred CCE--EEEEcCchHHHHHHHHHHhCCCCCcEEEecCC
Confidence 455 999999999999863 46899999983
No 150
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=28.95 E-value=31 Score=31.46 Aligned_cols=32 Identities=9% Similarity=0.035 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeC
Q 042987 1 MKDTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIP 40 (481)
Q Consensus 1 m~~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~ 40 (481)
|+++|+++-.|+-|- .+|..|. .| |+|+++..
T Consensus 1 M~mkI~IiGaGa~G~-----~~a~~L~-~g--~~V~~~~r 32 (307)
T 3ego_A 1 MSLKIGIIGGGSVGL-----LCAYYLS-LY--HDVTVVTR 32 (307)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHH-TT--SEEEEECS
T ss_pred CCCEEEEECCCHHHH-----HHHHHHh-cC--CceEEEEC
Confidence 778999998888875 6788898 99 99999854
No 151
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=28.92 E-value=88 Score=24.28 Aligned_cols=42 Identities=12% Similarity=0.111 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhccCCccEEEECCCCcc--hHHhhhhhc-------CCceEEEeccc
Q 042987 99 PKLHETLITISKRSNLKAFVIDFFCNP--AFQVSSSTL-------SIPTYYYFTTA 145 (481)
Q Consensus 99 ~~~~~ll~~~~~~~~pD~VI~D~~~~~--~~~~A~~~l-------giP~v~~~~~~ 145 (481)
....+++++. +||+||.|...+. |..++ +++ .+|.|.++...
T Consensus 47 ~~al~~~~~~----~~DlillD~~MP~mdG~el~-~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 47 LTALPMLKKG----DFDFVVTDWNMPGMQGIDLL-KNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HHHHHHHHHH----CCSEEEEESCCSSSCHHHHH-HHHHHSTTTTTCCEEEEESSC
T ss_pred HHHHHHHHhC----CCCEEEEcCCCCCCCHHHHH-HHHHhCCCCCCCeEEEEECCC
No 152
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=28.49 E-value=1.1e+02 Score=28.34 Aligned_cols=29 Identities=7% Similarity=0.203 Sum_probs=23.0
Q ss_pred CccEEEECCCCcchHHhhhhhcCCceEEEecc
Q 042987 113 NLKAFVIDFFCNPAFQVSSSTLSIPTYYYFTT 144 (481)
Q Consensus 113 ~pD~VI~D~~~~~~~~~A~~~lgiP~v~~~~~ 144 (481)
+.|++|+. .++...+| ..+|+|+|.++..
T Consensus 261 ~a~~~i~~--DsG~~HlA-aa~g~P~v~lfg~ 289 (349)
T 3tov_A 261 RCNLLITN--DSGPMHVG-ISQGVPIVALYGP 289 (349)
T ss_dssp TCSEEEEE--SSHHHHHH-HTTTCCEEEECSS
T ss_pred hCCEEEEC--CCCHHHHH-HhcCCCEEEEECC
Confidence 67899976 46677778 8899999998653
No 153
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=28.49 E-value=3e+02 Score=25.13 Aligned_cols=111 Identities=17% Similarity=0.124 Sum_probs=60.4
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhC-CCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhc
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERS-GVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLN 357 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~ 357 (481)
+.+|++|.+. ...+.++.+. +..++.++..+ .. ..+.+.++. ++ ..+-...+++.
T Consensus 8 vgiiG~G~~g-------~~~~~~l~~~~~~~lvav~d~~----------~~--~~~~~~~~~---g~--~~~~~~~~~l~ 63 (354)
T 3db2_A 8 VAAIGLGRWA-------YVMADAYTKSEKLKLVTCYSRT----------ED--KREKFGKRY---NC--AGDATMEALLA 63 (354)
T ss_dssp EEEECCSHHH-------HHHHHHHTTCSSEEEEEEECSS----------HH--HHHHHHHHH---TC--CCCSSHHHHHH
T ss_pred EEEEccCHHH-------HHHHHHHHhCCCcEEEEEECCC----------HH--HHHHHHHHc---CC--CCcCCHHHHhc
Confidence 7888888865 3456667665 55655555432 00 001122222 22 12556677885
Q ss_pred ccCcceeeeccC----chhHHHhHhcCCcEEe-cccc--cchhHHHHHHHHHhceeeEeecCC
Q 042987 358 HESVGGFVTHCG----WNSVLEGVCAGVPMLA-WPLY--AEQKMIRAVVVEEMKVGLAVTRSE 413 (481)
Q Consensus 358 ~~~~~~~I~HgG----~gt~~eal~~GvP~l~-~P~~--~DQ~~na~~v~~~~G~G~~l~~~~ 413 (481)
.+++++++---- ...+.+|+.+|++++| -|+. .+|-.-...++++.|+-+.+....
T Consensus 64 ~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~ 126 (354)
T 3db2_A 64 REDVEMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSS 126 (354)
T ss_dssp CSSCCEEEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGG
T ss_pred CCCCCEEEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeech
Confidence 544444553222 3356788999999887 3654 344444344445557766666543
No 154
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=28.37 E-value=24 Score=31.84 Aligned_cols=33 Identities=18% Similarity=0.223 Sum_probs=24.5
Q ss_pred CccEEE-ECCCCc-chHHhhhhhcCCceEEEeccch
Q 042987 113 NLKAFV-IDFFCN-PAFQVSSSTLSIPTYYYFTTAG 146 (481)
Q Consensus 113 ~pD~VI-~D~~~~-~~~~~A~~~lgiP~v~~~~~~~ 146 (481)
.||+|| .|...- -++.-| .++|||+|.++-+.+
T Consensus 118 ~PdlliV~Dp~~e~~AI~EA-~~lgIPvIalvDTn~ 152 (295)
T 2zkq_b 118 EPRLLVVTDPRADHQPLTEA-SYVNLPTIALCNTDS 152 (295)
T ss_dssp CCSEEEESCTTTTHHHHHHH-HHHTCCEEEEECTTC
T ss_pred CCCeEEEeCCCcchhHHHHH-HHhCCCEEEEecCCC
Confidence 788887 565443 355578 999999999987654
No 155
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=28.11 E-value=1.8e+02 Score=24.86 Aligned_cols=43 Identities=12% Similarity=-0.021 Sum_probs=28.9
Q ss_pred eecccchh-hhhcccCcceeeeccCchhHHHhHh---------cCCcEEeccc
Q 042987 346 VESWAPQV-EVLNHESVGGFVTHCGWNSVLEGVC---------AGVPMLAWPL 388 (481)
Q Consensus 346 v~~~~p~~-~ll~~~~~~~~I~HgG~gt~~eal~---------~GvP~l~~P~ 388 (481)
+...++.. .++..-+-+.++--||.||.-|... +++|++++-.
T Consensus 95 ~~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 95 AVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred ecCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 44555643 3443333347888999999988762 5999998864
No 156
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=27.95 E-value=59 Score=31.61 Aligned_cols=34 Identities=12% Similarity=0.099 Sum_probs=26.9
Q ss_pred HHHHHHHHhhccCCccEEEECCCCcchHHhhhhhcCCceEEE
Q 042987 100 KLHETLITISKRSNLKAFVIDFFCNPAFQVSSSTLSIPTYYY 141 (481)
Q Consensus 100 ~~~~ll~~~~~~~~pD~VI~D~~~~~~~~~A~~~lgiP~v~~ 141 (481)
.+++++++. +||++|.+.. ...+| +++|||++.+
T Consensus 366 ~le~~i~~~----~pDllig~~~---~~~~a-~k~gip~~~~ 399 (458)
T 3pdi_B 366 DLEHAARAG----QAQLVIGNSH---ALASA-RRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHHH----TCSEEEECTT---HHHHH-HHTTCCEEEC
T ss_pred HHHHHHHhc----CCCEEEEChh---HHHHH-HHcCCCEEEe
Confidence 356677777 9999999843 56788 9999999875
No 157
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=27.87 E-value=73 Score=28.91 Aligned_cols=37 Identities=5% Similarity=-0.172 Sum_probs=29.0
Q ss_pred CCcEEEEEcCCCccC----HHHHHHHHHHHHhCCCCeEEEEEe
Q 042987 1 MKDTIVFYTSPGRGH----LNSMVELGKLILTYHPCFSIDIII 39 (481)
Q Consensus 1 m~~~il~~~~p~~GH----v~P~l~La~~L~~~G~~h~Vt~~~ 39 (481)
|++||+++..+-..- +.--..++++|.+.| |+|..+.
T Consensus 12 ~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g--~~v~~i~ 52 (317)
T 4eg0_A 12 RFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAG--IDAHPFD 52 (317)
T ss_dssp GGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTT--CEEEEEC
T ss_pred hcceEEEEECCCCCcceeeHHHHHHHHHHHHHCC--CEEEEEe
Confidence 567899998764432 346788999999999 9999984
No 158
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=27.71 E-value=50 Score=29.91 Aligned_cols=32 Identities=16% Similarity=0.331 Sum_probs=27.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEe
Q 042987 1 MKDTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIII 39 (481)
Q Consensus 1 m~~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~ 39 (481)
|..||.|+-.|..|. ++|+.|.++| |+|+...
T Consensus 4 Ms~kIgfIGLG~MG~-----~mA~~L~~~G--~~V~v~d 35 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGT-----PIAEILLEAG--YELVVWN 35 (297)
T ss_dssp CCCEEEEECCSTTHH-----HHHHHHHHTT--CEEEEC-
T ss_pred CCCcEEEEecHHHHH-----HHHHHHHHCC--CeEEEEe
Confidence 767899999988884 6899999999 9999863
No 159
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=27.47 E-value=50 Score=28.12 Aligned_cols=38 Identities=5% Similarity=-0.032 Sum_probs=29.5
Q ss_pred cEEEEEcCCCccCHHH-HHHHHHHHHhCCCCeEEEEEeCCCC
Q 042987 3 DTIVFYTSPGRGHLNS-MVELGKLILTYHPCFSIDIIIPTAP 43 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P-~l~La~~L~~~G~~h~Vt~~~~~~~ 43 (481)
+||++.-.|+ +...- ...|.+.|+++| ++|.++.+...
T Consensus 6 k~IllgiTGs-iaayk~~~~ll~~L~~~g--~eV~vv~T~~A 44 (207)
T 3mcu_A 6 KRIGFGFTGS-HCTYEEVMPHLEKLIAEG--AEVRPVVSYTV 44 (207)
T ss_dssp CEEEEEECSC-GGGGTTSHHHHHHHHHTT--CEEEEEECC--
T ss_pred CEEEEEEECh-HHHHHHHHHHHHHHHhCC--CEEEEEEehHH
Confidence 5788877776 45665 789999999999 99999976644
No 160
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=27.36 E-value=30 Score=30.43 Aligned_cols=33 Identities=15% Similarity=0.152 Sum_probs=24.2
Q ss_pred CccEEE-ECCCCc-chHHhhhhhcCCceEEEeccch
Q 042987 113 NLKAFV-IDFFCN-PAFQVSSSTLSIPTYYYFTTAG 146 (481)
Q Consensus 113 ~pD~VI-~D~~~~-~~~~~A~~~lgiP~v~~~~~~~ 146 (481)
.||+|| .|+..- -++.-| .++|||+|.++-+.+
T Consensus 117 ~PdllvV~Dp~~d~~ai~EA-~~l~IP~Ial~DTn~ 151 (252)
T 3u5c_A 117 EPRLVIVTDPRSDAQAIKEA-SYVNIPVIALTDLDS 151 (252)
T ss_dssp CCSEEEESCTTTTHHHHHHH-HTTTCCEEEEECTTC
T ss_pred CCceEEEeCCccchHHHHHH-HHcCCCEEEEEcCCC
Confidence 788877 565443 355578 999999999987653
No 161
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=27.33 E-value=71 Score=28.38 Aligned_cols=41 Identities=15% Similarity=0.082 Sum_probs=30.1
Q ss_pred HHHHHHHHHhhccCCccEEEECCCCc------chHHhhhhhcCCceEEEecc
Q 042987 99 PKLHETLITISKRSNLKAFVIDFFCN------PAFQVSSSTLSIPTYYYFTT 144 (481)
Q Consensus 99 ~~~~~ll~~~~~~~~pD~VI~D~~~~------~~~~~A~~~lgiP~v~~~~~ 144 (481)
..+.+++++. +||+|++..... .+..+| ++||+|.+..++.
T Consensus 102 ~~La~~i~~~----~~dlVl~G~~s~d~~~~~v~p~lA-~~L~~~~vt~v~~ 148 (264)
T 1o97_C 102 RILTEVIKKE----APDMVFAGVQSSDQAYASTGISVA-SYLNWPHAAVVAD 148 (264)
T ss_dssp HHHHHHHHHH----CCSEEEEESCCTTTCCCCHHHHHH-HHHTCCEEEEEEE
T ss_pred HHHHHHHHhc----CCCEEEEcCCccCCchhhHHHHHH-HHhCCCcccceEE
Confidence 3455566666 899999776442 466688 9999999997653
No 162
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=27.12 E-value=2.2e+02 Score=25.12 Aligned_cols=31 Identities=10% Similarity=0.106 Sum_probs=24.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEe
Q 042987 4 TIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIII 39 (481)
Q Consensus 4 ~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~ 39 (481)
+++++|.++.| =-.++|++|.++| ++|.++.
T Consensus 29 k~~lVTGas~G---IG~aia~~la~~G--~~V~~~~ 59 (283)
T 3v8b_A 29 PVALITGAGSG---IGRATALALAADG--VTVGALG 59 (283)
T ss_dssp CEEEEESCSSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCC--CEEEEEe
Confidence 67888876654 3468999999999 9998874
No 163
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=27.05 E-value=71 Score=25.84 Aligned_cols=28 Identities=18% Similarity=0.146 Sum_probs=23.3
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhCC
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERSG 306 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~~ 306 (481)
.+|+++||....+...++..+.+|++.+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 6899999998767777888888888764
No 164
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=26.91 E-value=93 Score=25.18 Aligned_cols=28 Identities=14% Similarity=0.194 Sum_probs=24.3
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhCC
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERSG 306 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~~ 306 (481)
.+|+++||....+...++..+.+|++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 5899999998888888999999998864
No 165
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=26.89 E-value=1.1e+02 Score=28.52 Aligned_cols=35 Identities=20% Similarity=0.197 Sum_probs=23.8
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeC
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRA 315 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 315 (481)
+++++.|+... ...+..++++|.+.|..+.+.+..
T Consensus 18 Il~~~~~~~gh--~~~~~~La~~L~~~GheV~v~~~~ 52 (398)
T 4fzr_A 18 ILVIAGCSEGF--VMPLVPLSWALRAAGHEVLVAASE 52 (398)
T ss_dssp EEEECCSSHHH--HGGGHHHHHHHHHTTCEEEEEEEG
T ss_pred EEEEcCCCcch--HHHHHHHHHHHHHCCCEEEEEcCH
Confidence 77777764331 122556888999899998887754
No 166
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=26.86 E-value=97 Score=23.42 Aligned_cols=39 Identities=8% Similarity=0.090 Sum_probs=29.2
Q ss_pred CCcEEEEEcCCCccCH--HHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 1 MKDTIVFYTSPGRGHL--NSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 1 m~~~il~~~~p~~GHv--~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
|++-+++++.+-+|+. .=.+.+|.++...| |+|.++...
T Consensus 1 Mkk~~~vv~~~P~g~~~~~~al~~a~a~~a~~--~~v~vff~~ 41 (119)
T 2d1p_B 1 MKRIAFVFSTAPHGTAAGREGLDALLATSALT--DDLAVFFIA 41 (119)
T ss_dssp CCCEEEEECSCTTTSTHHHHHHHHHHHHHTTC--SCEEEEECG
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhCC--CCEEEEEeh
Confidence 7655666777778876 55677888888889 999888544
No 167
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=26.75 E-value=47 Score=25.52 Aligned_cols=29 Identities=14% Similarity=0.325 Sum_probs=20.4
Q ss_pred CCccEEEECCCCcc--hHHhhhhh---cCCceEEE
Q 042987 112 SNLKAFVIDFFCNP--AFQVSSST---LSIPTYYY 141 (481)
Q Consensus 112 ~~pD~VI~D~~~~~--~~~~A~~~---lgiP~v~~ 141 (481)
.+||+||.|...+. |..++ ++ .++|.|.+
T Consensus 52 ~~~DlvllDi~mP~~~G~el~-~~lr~~~ipvI~l 85 (123)
T 2lpm_A 52 GQFDIAIIDVNLDGEPSYPVA-DILAERNVPFIFA 85 (123)
T ss_dssp CCSSEEEECSSSSSCCSHHHH-HHHHHTCCSSCCB
T ss_pred CCCCEEEEecCCCCCCHHHHH-HHHHcCCCCEEEE
Confidence 38999999987764 45555 44 47886654
No 168
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=26.69 E-value=58 Score=29.28 Aligned_cols=133 Identities=11% Similarity=0.069 Sum_probs=67.3
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhh-hhcccCcceeeeccC
Q 042987 291 SSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVE-VLNHESVGGFVTHCG 369 (481)
Q Consensus 291 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~-ll~~~~~~~~I~HgG 369 (481)
+...+..+++.+++.+.+++.-++..... ......| ..... +-.+++++.+|.|||
T Consensus 136 ~d~~~~~~~~~a~e~glpv~iH~~~~~~~------~~~~~~p-----------------~~~~~v~~~~P~l~ivl~H~G 192 (291)
T 3irs_A 136 DDRRLYPLYAFCEDNGIPVIMMTGGNAGP------DITYTNP-----------------EHIDRVLGDFPDLTVVSSHGN 192 (291)
T ss_dssp TCGGGHHHHHHHHHTTCCEEEECSSSCSS------SGGGGCH-----------------HHHHHHHHHCTTCCEEEEGGG
T ss_pred CCHHHHHHHHHHHHcCCeEEEeCCCCCCC------CCccCCH-----------------HHHHHHHHHCCCCEEEeecCC
Confidence 34567888888999998887766542000 0000000 01122 334678888999999
Q ss_pred chhHHHhHhc--CCcEEeccccc---chh--HHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHH-hcCch-hHHH
Q 042987 370 WNSVLEGVCA--GVPMLAWPLYA---EQK--MIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSEL-MDSEK-GRAV 440 (481)
Q Consensus 370 ~gt~~eal~~--GvP~l~~P~~~---DQ~--~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~-l~~~~-~~~~ 440 (481)
+....+++.. ..|-+-+-..+ ..+ ..-..+.+..|.-..+-.++ -|..+.....+.+.++ ++.+. .+.+
T Consensus 193 ~~~~~~~~~l~~~~~nvy~~~Sg~~~~~~~~~~~~~~~~~~g~drllfgSD--~P~~~~~~~~~~~~~l~l~~e~~~~i~ 270 (291)
T 3irs_A 193 WPWVQEIIHVAFRRPNLYLSPDMYLYNLPGHADFIQAANSFLADRMLFGTA--YPMCPLKEYTEWFLTLPIKPDAMEKIL 270 (291)
T ss_dssp TTCHHHHHHHHHHCTTEEEECGGGGSSSTTHHHHHHHHTTGGGGTBCCCCC--BTSSCHHHHHHHHHTSSCCHHHHHHHH
T ss_pred cccHHHHHHHHhHCCCeEecHHHHhccCCCHHHHHHHHHHhCcceEEEecC--CCCCCHHHHHHHHHHCCCCHHHHHHHH
Confidence 8877776653 23333333211 111 11112224556655554444 3455666666666554 22222 2345
Q ss_pred HHHHHHHH
Q 042987 441 KERAVAMK 448 (481)
Q Consensus 441 ~~~a~~l~ 448 (481)
.+||+++=
T Consensus 271 ~~NA~rl~ 278 (291)
T 3irs_A 271 HGNAERLL 278 (291)
T ss_dssp THHHHHHH
T ss_pred HHHHHHHh
Confidence 56666554
No 169
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=26.38 E-value=74 Score=25.74 Aligned_cols=28 Identities=18% Similarity=0.146 Sum_probs=22.6
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhCC
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERSG 306 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~~ 306 (481)
+.|+++||....+...++..+..|++..
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 6899999998666677888888888753
No 170
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=26.32 E-value=25 Score=29.82 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=24.1
Q ss_pred CccEEE-ECCCCc-chHHhhhhhcCCceEEEeccch
Q 042987 113 NLKAFV-IDFFCN-PAFQVSSSTLSIPTYYYFTTAG 146 (481)
Q Consensus 113 ~pD~VI-~D~~~~-~~~~~A~~~lgiP~v~~~~~~~ 146 (481)
.||+|| .|+..- -+..-| .++|||+|.++-+.+
T Consensus 111 ~Pdllvv~Dp~~d~~ai~EA-~~l~IP~Ial~DTn~ 145 (202)
T 3j20_B 111 EPDVLIVTDPRADHQAMREA-VEIGIPIVALVDTEN 145 (202)
T ss_dssp CCSEEEESCTTTSHHHHHHH-HHHTCCEEEEECTTC
T ss_pred CCCeEEEeCCccchHHHHHH-HHcCCCEEEEEcCCC
Confidence 788877 665443 355578 999999999887553
No 171
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=26.28 E-value=1.4e+02 Score=30.07 Aligned_cols=78 Identities=15% Similarity=0.149 Sum_probs=45.8
Q ss_pred HHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcC--CCeEeecccchhhh---------hcccCcce
Q 042987 295 LKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKD--RGLVVESWAPQVEV---------LNHESVGG 363 (481)
Q Consensus 295 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~--~~v~v~~~~p~~~l---------l~~~~~~~ 363 (481)
.+.+++.|++.|++.++.+.+... ..+.+.+.. .++... +..+..- ...-..++
T Consensus 7 a~~lv~~L~~~GV~~vfg~PG~~~--------------~~l~~al~~~~~~i~~i-~~~~E~~Aa~~A~GyAr~tgk~~v 71 (590)
T 1v5e_A 7 GLAVMKILESWGADTIYGIPSGTL--------------SSLMDAMGEEENNVKFL-QVKHEEVGAMAAVMQSKFGGNLGV 71 (590)
T ss_dssp HHHHHHHHHHTTCCEEEECCCTTT--------------HHHHTTSSSTTCCCEEE-ECSSHHHHHHHHHHHHHTTCCCCE
T ss_pred HHHHHHHHHHcCCCEEEEecCCch--------------HHHHHHHHhcCCCCeEE-eeCCHHHHHHHHHHHHHHHCCCEE
Confidence 456888899999998888876410 112222211 123221 1221111 11122444
Q ss_pred eeeccC------chhHHHhHhcCCcEEecc
Q 042987 364 FVTHCG------WNSVLEGVCAGVPMLAWP 387 (481)
Q Consensus 364 ~I~HgG------~gt~~eal~~GvP~l~~P 387 (481)
+++|.| .+.+.+|.+.++|+|++-
T Consensus 72 ~~~tsGpG~~N~~~gl~~A~~~~vPll~It 101 (590)
T 1v5e_A 72 TVGSGGPGASHLINGLYDAAMDNIPVVAIL 101 (590)
T ss_dssp EEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred EEeCcChHHHHHHHHHHHHHhcCCCEEEEc
Confidence 999998 567889999999999984
No 172
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=26.24 E-value=1.9e+02 Score=26.37 Aligned_cols=30 Identities=13% Similarity=-0.013 Sum_probs=24.1
Q ss_pred ccCcceeeeccCchhHHHhHh--------cCCcEEecccc
Q 042987 358 HESVGGFVTHCGWNSVLEGVC--------AGVPMLAWPLY 389 (481)
Q Consensus 358 ~~~~~~~I~HgG~gt~~eal~--------~GvP~l~~P~~ 389 (481)
.+++ +|.-||=||+.|++. .++|+.++|..
T Consensus 82 ~~d~--vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 82 GVAT--VIAGGGDGTINEVSTALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp TCSE--EEEEESHHHHHHHHHHHHHCCSSCCCEEEEEECS
T ss_pred CCCE--EEEEccchHHHHHHHHHhhcccCCCCeEEEecCc
Confidence 3455 999999999998753 57899999973
No 173
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=25.94 E-value=57 Score=27.77 Aligned_cols=39 Identities=8% Similarity=0.041 Sum_probs=29.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHh-CCCCeEEEEEeCCCCC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILT-YHPCFSIDIIIPTAPF 44 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~-~G~~h~Vt~~~~~~~~ 44 (481)
+||++.-.|+.+=. -...|.++|++ .| ++|.++.+....
T Consensus 20 k~IllgvTGsiaa~-k~~~lv~~L~~~~g--~~V~vv~T~~A~ 59 (206)
T 1qzu_A 20 FHVLVGVTGSVAAL-KLPLLVSKLLDIPG--LEVAVVTTERAK 59 (206)
T ss_dssp EEEEEEECSSGGGG-THHHHHHHHC---C--EEEEEEECTGGG
T ss_pred CEEEEEEeChHHHH-HHHHHHHHHhcccC--CEEEEEECHhHH
Confidence 57888888887744 56999999999 89 999999876443
No 174
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=25.93 E-value=3.5e+02 Score=23.97 Aligned_cols=31 Identities=10% Similarity=0.135 Sum_probs=24.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEe
Q 042987 4 TIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIII 39 (481)
Q Consensus 4 ~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~ 39 (481)
+++++|.++.| + -.++|++|.++| ++|.++.
T Consensus 42 k~vlVTGas~G-I--G~aia~~la~~G--~~V~~~~ 72 (293)
T 3rih_A 42 RSVLVTGGTKG-I--GRGIATVFARAG--ANVAVAA 72 (293)
T ss_dssp CEEEETTTTSH-H--HHHHHHHHHHTT--CEEEEEE
T ss_pred CEEEEeCCCcH-H--HHHHHHHHHHCC--CEEEEEE
Confidence 67888866654 3 457899999999 9999885
No 175
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=25.92 E-value=3.7e+02 Score=24.33 Aligned_cols=110 Identities=15% Similarity=0.227 Sum_probs=58.8
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhC-CCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhc
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERS-GVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLN 357 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~ 357 (481)
+.+|+.|.+. ...+.++.+. +..++.++..+ .. ..+.+.++. + +..+-...+++.
T Consensus 7 vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~----------~~--~~~~~a~~~---g--~~~~~~~~~~l~ 62 (344)
T 3euw_A 7 IALFGAGRIG-------HVHAANIAANPDLELVVIADPF----------IE--GAQRLAEAN---G--AEAVASPDEVFA 62 (344)
T ss_dssp EEEECCSHHH-------HHHHHHHHHCTTEEEEEEECSS----------HH--HHHHHHHTT---T--CEEESSHHHHTT
T ss_pred EEEECCcHHH-------HHHHHHHHhCCCcEEEEEECCC----------HH--HHHHHHHHc---C--CceeCCHHHHhc
Confidence 7888888875 2455566654 55655555432 00 001111111 2 223445677887
Q ss_pred ccCcceeeeccCch----hHHHhHhcCCcEEe-ccccc--chhHHHHHHHHHhceeeEeecC
Q 042987 358 HESVGGFVTHCGWN----SVLEGVCAGVPMLA-WPLYA--EQKMIRAVVVEEMKVGLAVTRS 412 (481)
Q Consensus 358 ~~~~~~~I~HgG~g----t~~eal~~GvP~l~-~P~~~--DQ~~na~~v~~~~G~G~~l~~~ 412 (481)
.+++++++----.. .+.+|+.+|++++| -|+.. ++-.-...++++.|+-+.+...
T Consensus 63 ~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~ 124 (344)
T 3euw_A 63 RDDIDGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFN 124 (344)
T ss_dssp CSCCCEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCG
T ss_pred CCCCCEEEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecch
Confidence 55544466444333 36788999999887 36543 3433333334555766666543
No 176
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=25.76 E-value=3.8e+02 Score=24.40 Aligned_cols=112 Identities=15% Similarity=0.179 Sum_probs=60.8
Q ss_pred cEEEEecCCCcCCCHHHHHHHHHHHHhC--CCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhh
Q 042987 278 SVLFLCFGSLGSFSSKQLKEMAIGLERS--GVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEV 355 (481)
Q Consensus 278 ~~v~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~l 355 (481)
.+.+|+.|.+. ...+.++.+. +..++.++..+ .. -.+.+.++. ++ ..+-...++
T Consensus 15 rvgiiG~G~~g-------~~~~~~l~~~~~~~~lvav~d~~----------~~--~~~~~~~~~---~~--~~~~~~~~l 70 (354)
T 3q2i_A 15 RFALVGCGRIA-------NNHFGALEKHADRAELIDVCDID----------PA--ALKAAVERT---GA--RGHASLTDM 70 (354)
T ss_dssp EEEEECCSTTH-------HHHHHHHHHTTTTEEEEEEECSS----------HH--HHHHHHHHH---CC--EEESCHHHH
T ss_pred eEEEEcCcHHH-------HHHHHHHHhCCCCeEEEEEEcCC----------HH--HHHHHHHHc---CC--ceeCCHHHH
Confidence 38899999886 3445666665 55655555432 00 001122222 22 235566778
Q ss_pred hcccCcceeeeccCc----hhHHHhHhcCCcEEe-ccccc--chhHHHHHHHHHhceeeEeecCC
Q 042987 356 LNHESVGGFVTHCGW----NSVLEGVCAGVPMLA-WPLYA--EQKMIRAVVVEEMKVGLAVTRSE 413 (481)
Q Consensus 356 l~~~~~~~~I~HgG~----gt~~eal~~GvP~l~-~P~~~--DQ~~na~~v~~~~G~G~~l~~~~ 413 (481)
|..+++++++----. ..+.+++.+|++++| -|+.. ++-.-...++++.|+-+.+....
T Consensus 71 l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~ 135 (354)
T 3q2i_A 71 LAQTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQN 135 (354)
T ss_dssp HHHCCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGG
T ss_pred hcCCCCCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcc
Confidence 875554446543222 246688999999887 36643 33333333335557766665443
No 177
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=25.39 E-value=3.4e+02 Score=23.70 Aligned_cols=32 Identities=6% Similarity=0.029 Sum_probs=24.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeC
Q 042987 4 TIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIP 40 (481)
Q Consensus 4 ~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~ 40 (481)
+++++|.++.| + -.++|++|.++| ++|.++.-
T Consensus 33 k~~lVTGas~G-I--G~aia~~la~~G--~~V~~~~r 64 (276)
T 3r1i_A 33 KRALITGASTG-I--GKKVALAYAEAG--AQVAVAAR 64 (276)
T ss_dssp CEEEEESTTSH-H--HHHHHHHHHHTT--CEEEEEES
T ss_pred CEEEEeCCCCH-H--HHHHHHHHHHCC--CEEEEEeC
Confidence 67788866543 3 468899999999 99998753
No 178
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=25.33 E-value=85 Score=24.06 Aligned_cols=41 Identities=17% Similarity=0.096 Sum_probs=30.4
Q ss_pred CCcEEEEEcCCCcc-CH-HHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 1 MKDTIVFYTSPGRG-HL-NSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 1 m~~~il~~~~p~~G-Hv-~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
|+.-|+++.+|+.- .. ..+..+++.|+++.|...|.+++-+
T Consensus 2 m~~alllv~HGS~~~~~~~~~~~la~~l~~~~~~~~V~~a~le 44 (133)
T 2xws_A 2 MRRGLVIVGHGSQLNHYREVMELHRKRIEESGAFDEVKIAFAA 44 (133)
T ss_dssp CCEEEEEEECSCCCHHHHHHHHHHHHHHHHHTSSSEEEEEESS
T ss_pred CcceEEEEECCCCCHHHHHHHHHHHHHHHhhCCCCcEEeeeee
Confidence 65679999999874 23 3788999999988655677776444
No 179
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=24.98 E-value=2.3e+02 Score=22.52 Aligned_cols=107 Identities=12% Similarity=0.102 Sum_probs=0.0
Q ss_pred hcCCCC--CcEEEEecCCCcCCCHHHHHHHHHHHHhCC--CeEEEEEeC--CCCCCccccccccccCchhhHhhhcCCCe
Q 042987 271 LDSKPS--RSVLFLCFGSLGSFSSKQLKEMAIGLERSG--VKFLWVVRA--PAPDSIENRSSLESLLPEGFLDRTKDRGL 344 (481)
Q Consensus 271 l~~~~~--~~~v~vs~GS~~~~~~~~~~~~~~al~~~~--~~~i~~~~~--~~~~~~~~~~~~~~~lp~~~~~~~~~~~v 344 (481)
|..+.+ ..+|+|+.||........+..+.+.+++.. ..+-+.+-. . ...+++.+..- ..+.+
T Consensus 17 ~~~~~~M~~avlLv~HGS~~p~~~~~~~~la~~l~~~~~~~~V~~afle~~~-----------~Psl~~~l~~l-G~~~V 84 (156)
T 1tjn_A 17 LYFQGHMRRGLVIVGHGSQLNHYREVMELHRKRIEESGAFDEVKIAFAARKR-----------RPMPDEAIREM-NCDII 84 (156)
T ss_dssp ------CCEEEEEEECCTTSTTHHHHHHHHHHHHHHHTSSSEEEEEECSSSC-----------SSCHHHHHHHC-CCSEE
T ss_pred hhcCCCCCcCEEEEECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEEEecCCC-----------CCCHHHHHHHc-CCCEE
Q ss_pred EeecccchhhhhcccCcceeeeccCchh--HHHhH------------hcCCcEEecccccchhHHHHHHHHHh
Q 042987 345 VVESWAPQVEVLNHESVGGFVTHCGWNS--VLEGV------------CAGVPMLAWPLYAEQKMIRAVVVEEM 403 (481)
Q Consensus 345 ~v~~~~p~~~ll~~~~~~~~I~HgG~gt--~~eal------------~~GvP~l~~P~~~DQ~~na~~v~~~~ 403 (481)
++.++ |+..|..-+ +.+.+ ..++.+.+.|-.++.+..+..+.+++
T Consensus 85 vVvPl--------------fL~~G~h~~~DIp~~l~~~~~~~sw~~~~~~~~i~~~~pLG~~p~l~~~l~~ri 143 (156)
T 1tjn_A 85 YVVPL--------------FISYGLHVTEDLPDLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSV 143 (156)
T ss_dssp EEEEC--------------CSSCSHHHHTHHHHHHTCCCSSSCEEEEETTEEEEECCCSTTCHHHHHHHHHHH
T ss_pred EEEec--------------hhcCCchhHhHHHHHHHHHHhcccccccCCCceEEEeCCCCCCHHHHHHHHHHH
No 180
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=24.70 E-value=1.8e+02 Score=22.19 Aligned_cols=49 Identities=8% Similarity=0.045 Sum_probs=32.3
Q ss_pred hcCCcEEecccccchhHHHHHHHHHhc-e-eeEeecCCccCcccCHHHHHHHHHHHhcCc
Q 042987 378 CAGVPMLAWPLYAEQKMIRAVVVEEMK-V-GLAVTRSEEKDRLVSAAELEQRVSELMDSE 435 (481)
Q Consensus 378 ~~GvP~l~~P~~~DQ~~na~~v~~~~G-~-G~~l~~~~~~~~~~~~~~l~~~i~~~l~~~ 435 (481)
...+|+|++--..|.......+ +. | + +....+ ++.++|.++|..+++..
T Consensus 74 ~~~~~ii~~s~~~~~~~~~~~~-~~-g~~~~~l~KP-------~~~~~L~~~i~~~l~~~ 124 (151)
T 3kcn_A 74 SPNSVYLMLTGNQDLTTAMEAV-NE-GQVFRFLNKP-------CQMSDIKAAINAGIKQY 124 (151)
T ss_dssp CSSCEEEEEECGGGHHHHHHHH-HH-TCCSEEEESS-------CCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEECCCCHHHHHHHH-Hc-CCeeEEEcCC-------CCHHHHHHHHHHHHHHH
Confidence 3577888876665555444444 33 7 5 343334 78999999999998644
No 181
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=24.67 E-value=90 Score=26.67 Aligned_cols=35 Identities=9% Similarity=-0.071 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeC
Q 042987 1 MKDTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIP 40 (481)
Q Consensus 1 m~~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~ 40 (481)
|+.+.++++.++.| =-..|+++|.++| ++|+++.-
T Consensus 1 m~~k~vlITGas~g---IG~~~a~~l~~~G--~~V~~~~r 35 (236)
T 1ooe_A 1 MSSGKVIVYGGKGA---LGSAILEFFKKNG--YTVLNIDL 35 (236)
T ss_dssp -CCEEEEEETTTSH---HHHHHHHHHHHTT--EEEEEEES
T ss_pred CCCCEEEEECCCcH---HHHHHHHHHHHCC--CEEEEEec
Confidence 55567788855543 3468999999999 99998753
No 182
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=24.32 E-value=1.4e+02 Score=25.31 Aligned_cols=40 Identities=5% Similarity=0.045 Sum_probs=29.8
Q ss_pred CCcEEEEEcCC---------CccCHHHHHHHHHHHHhCCCCeEEEEEeCCC
Q 042987 1 MKDTIVFYTSP---------GRGHLNSMVELGKLILTYHPCFSIDIIIPTA 42 (481)
Q Consensus 1 m~~~il~~~~p---------~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~ 42 (481)
|+++|+++.+. ..-...=+......|.++| ++|+++++..
T Consensus 4 m~~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag--~~v~~vs~~~ 52 (224)
T 1u9c_A 4 MSKRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKG--YDVKVASIQG 52 (224)
T ss_dssp CCCEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTT--CEEEEEESSC
T ss_pred CCceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCC--CeEEEECCCC
Confidence 55688888872 3334566777888899999 9999998653
No 183
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=24.23 E-value=1e+02 Score=25.90 Aligned_cols=45 Identities=9% Similarity=0.016 Sum_probs=33.1
Q ss_pred hHHHHHHHHHhhccCCccEEEECCCCcchHHhhhhhcCCceEEEeccchh
Q 042987 98 NPKLHETLITISKRSNLKAFVIDFFCNPAFQVSSSTLSIPTYYYFTTAGS 147 (481)
Q Consensus 98 ~~~~~~ll~~~~~~~~pD~VI~D~~~~~~~~~A~~~lgiP~v~~~~~~~~ 147 (481)
.+..++.++++.+ .+.|+||.|. .+..+| +++|+|.+.+.+...+
T Consensus 128 ~~e~~~~i~~l~~-~G~~vvVG~~---~~~~~A-~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 128 EDEITTLISKVKT-ENIKIVVSGK---TVTDEA-IKQGLYGETINSGEES 172 (196)
T ss_dssp GGGHHHHHHHHHH-TTCCEEEECH---HHHHHH-HHTTCEEEECCCCHHH
T ss_pred HHHHHHHHHHHHH-CCCeEEECCH---HHHHHH-HHcCCcEEEEecCHHH
Confidence 3566677776654 3899999983 346688 9999999998775443
No 184
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=24.08 E-value=40 Score=30.38 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=24.9
Q ss_pred CccEEE-ECCCCc-chHHhhhhhcCCceEEEeccchh
Q 042987 113 NLKAFV-IDFFCN-PAFQVSSSTLSIPTYYYFTTAGS 147 (481)
Q Consensus 113 ~pD~VI-~D~~~~-~~~~~A~~~lgiP~v~~~~~~~~ 147 (481)
.||+|| .|...- -++.-| .++|||+|.++-+.+-
T Consensus 122 ePdllvV~Dp~~d~qAI~EA-~~lnIPtIALvDTnsd 157 (305)
T 3iz6_A 122 EPRLLILTDPRTDHQPIKES-ALGNIPTIAFCDTDSP 157 (305)
T ss_dssp CCSEEEESCTTTTHHHHHHH-HHHTCCEEEEECTTSC
T ss_pred CCceeEEeCcccchHHHHHH-HHcCCCEEEEEcCCCC
Confidence 788877 565443 355578 9999999999876643
No 185
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=24.01 E-value=87 Score=25.39 Aligned_cols=28 Identities=21% Similarity=0.113 Sum_probs=23.2
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhCC
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERSG 306 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~~ 306 (481)
.+|+++||....+...+...+.+|.+..
T Consensus 6 ~v~i~LGSNlGd~~~~l~~A~~~L~~~~ 33 (161)
T 3qbc_A 6 QAYLGLGSNIGDRESQLNDAIKILNEYD 33 (161)
T ss_dssp EEEEEEEECSSSHHHHHHHHHHHHHHST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 7999999998767777888888888743
No 186
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=23.93 E-value=1.6e+02 Score=25.23 Aligned_cols=42 Identities=12% Similarity=0.007 Sum_probs=27.7
Q ss_pred ecccchh-hhhcccCcceeeeccCchhHHHhHh----------cCCcEEeccc
Q 042987 347 ESWAPQV-EVLNHESVGGFVTHCGWNSVLEGVC----------AGVPMLAWPL 388 (481)
Q Consensus 347 ~~~~p~~-~ll~~~~~~~~I~HgG~gt~~eal~----------~GvP~l~~P~ 388 (481)
.+..+.. .++..-+-++++--||.||.-|... +++|++++-.
T Consensus 118 ~~~f~~Rk~~m~~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~~ 170 (217)
T 1wek_A 118 LRYFFVRKVLFVRYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLDR 170 (217)
T ss_dssp ESCHHHHHHHHHHTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEECH
T ss_pred cCCHHHHHHHHHHhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeCc
Confidence 3555543 3443334456788899999887632 5799999863
No 187
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=23.83 E-value=88 Score=24.68 Aligned_cols=36 Identities=8% Similarity=0.007 Sum_probs=29.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 4 TIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 4 ~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
-.+++..+..=.+.+.+.||...++.| ++|+++.+.
T Consensus 10 l~II~~sg~~d~~~~a~~lA~~Aaa~g--~eV~iF~t~ 45 (144)
T 2qs7_A 10 LSIIVFSGTIDKLMPVGILTSGAAASG--YEVNLFFTF 45 (144)
T ss_dssp EEEEECCCSHHHHHHHHHHHHHHHHTT--CEEEEEECH
T ss_pred EEEEEEcCCHHHHHHHHHHHHHHHHcC--CcEEEEEeh
Confidence 445555567778889999999999999 999999654
No 188
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=23.83 E-value=1.4e+02 Score=28.08 Aligned_cols=35 Identities=26% Similarity=0.304 Sum_probs=25.4
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeC
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRA 315 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 315 (481)
+++++.||.. ...-+..++++|++.|.++.+.+..
T Consensus 3 Ili~~~gt~G--hv~p~~~La~~L~~~Gh~V~v~~~~ 37 (404)
T 3h4t_A 3 VLITGCGSRG--DTEPLVALAARLRELGADARMCLPP 37 (404)
T ss_dssp EEEEEESSHH--HHHHHHHHHHHHHHTTCCEEEEECG
T ss_pred EEEEeCCCCc--cHHHHHHHHHHHHHCCCeEEEEeCH
Confidence 6778888753 1222556889999999999888754
No 189
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=23.47 E-value=4.1e+02 Score=23.90 Aligned_cols=110 Identities=18% Similarity=0.115 Sum_probs=59.7
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhC-CCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhc
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERS-GVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLN 357 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~ 357 (481)
+.+|++|.+. ...+.++.+. +..++.++..+ .. -.+.+.++. ++. +-...+++.
T Consensus 6 vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~----------~~--~~~~~~~~~---~~~---~~~~~~~l~ 60 (331)
T 4hkt_A 6 FGLLGAGRIG-------KVHAKAVSGNADARLVAVADAF----------PA--AAEAIAGAY---GCE---VRTIDAIEA 60 (331)
T ss_dssp EEEECCSHHH-------HHHHHHHHHCTTEEEEEEECSS----------HH--HHHHHHHHT---TCE---ECCHHHHHH
T ss_pred EEEECCCHHH-------HHHHHHHhhCCCcEEEEEECCC----------HH--HHHHHHHHh---CCC---cCCHHHHhc
Confidence 7788888765 2355566654 55655554332 00 001122222 222 556677887
Q ss_pred ccCcceeeeccC----chhHHHhHhcCCcEEe-cccc--cchhHHHHHHHHHhceeeEeecCC
Q 042987 358 HESVGGFVTHCG----WNSVLEGVCAGVPMLA-WPLY--AEQKMIRAVVVEEMKVGLAVTRSE 413 (481)
Q Consensus 358 ~~~~~~~I~HgG----~gt~~eal~~GvP~l~-~P~~--~DQ~~na~~v~~~~G~G~~l~~~~ 413 (481)
.+++++++---- ...+.+++.+|++++| -|+. .++-.-...++++.|+-+.+....
T Consensus 61 ~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~ 123 (331)
T 4hkt_A 61 AADIDAVVICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNR 123 (331)
T ss_dssp CTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGG
T ss_pred CCCCCEEEEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccc
Confidence 555544664222 3356789999999887 3654 344433333445557777666543
No 190
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=23.39 E-value=76 Score=29.00 Aligned_cols=37 Identities=14% Similarity=0.098 Sum_probs=28.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCC
Q 042987 1 MKDTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPF 44 (481)
Q Consensus 1 m~~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~ 44 (481)
|++||+|+-.|..+- ...++|.+.| |+|..+.+....
T Consensus 1 ~~mrivf~Gtp~fa~-----~~L~~L~~~~--~~v~~Vvt~pd~ 37 (314)
T 3tqq_A 1 MSLKIVFAGTPQFAV-----PTLRALIDSS--HRVLAVYTQPDR 37 (314)
T ss_dssp CCCEEEEEECSGGGH-----HHHHHHHHSS--SEEEEEECCCC-
T ss_pred CCcEEEEECCCHHHH-----HHHHHHHHCC--CeEEEEEeCCCC
Confidence 788999999886653 4457788899 999888775443
No 191
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=23.01 E-value=1.6e+02 Score=21.67 Aligned_cols=34 Identities=26% Similarity=0.519 Sum_probs=27.8
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeCC
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRAP 316 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 316 (481)
-|||-|.| +++.+++|..-++..|++++..++..
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 46666544 78899999999999999999988754
No 192
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=22.93 E-value=1e+02 Score=27.21 Aligned_cols=40 Identities=8% Similarity=-0.018 Sum_probs=28.8
Q ss_pred HHHHHHHHHhhccCCccEEEECCCCc------chHHhhhhhcCCceEEEec
Q 042987 99 PKLHETLITISKRSNLKAFVIDFFCN------PAFQVSSSTLSIPTYYYFT 143 (481)
Q Consensus 99 ~~~~~ll~~~~~~~~pD~VI~D~~~~------~~~~~A~~~lgiP~v~~~~ 143 (481)
..+.+++++. +||+|++..... .+..+| ++||+|.++..+
T Consensus 106 ~~La~~i~~~----~~dlVl~G~~s~d~d~~~v~p~lA-~~L~~~~vt~v~ 151 (255)
T 1efv_B 106 RVLAKLAEKE----KVDLVLLGKQAIDDDCNQTGQMTA-GFLDWPQGTFAS 151 (255)
T ss_dssp HHHHHHHHHH----TCSEEEEESCCTTTCCCCHHHHHH-HHHTCCEEEEEE
T ss_pred HHHHHHHHhc----CCCEEEEeCcccCCchhhHHHHHH-HHhCCCcccceE
Confidence 3444555554 899999766442 466688 999999999765
No 193
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=22.92 E-value=92 Score=25.22 Aligned_cols=28 Identities=14% Similarity=0.198 Sum_probs=23.3
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhCC
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERSG 306 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~~ 306 (481)
.+|+++||....+...+...+.+|++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLS 30 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCC
Confidence 5899999998777777888888888754
No 194
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=22.71 E-value=48 Score=31.69 Aligned_cols=65 Identities=14% Similarity=0.151 Sum_probs=41.4
Q ss_pred CCeEEe--CcccCCCCCCCCCCCcchhhhhhcCCCCCcEEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEE
Q 042987 243 PPLYCI--GPVVGRGNGENRGRDRHECLSWLDSKPSRSVLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLW 311 (481)
Q Consensus 243 ~~v~~v--Gpl~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 311 (481)
.+.++- ||++...+. ..=+...+|-...+...-|.|-++|+........+.+++++++.|...+.
T Consensus 233 i~~I~P~HGpi~r~~~~----~ii~~Y~~w~~~~~~~~~v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~~~ 299 (410)
T 4dik_A 233 IKALLPGHGLIWKKDPQ----RLLNHYVSVAKGDPKKGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVV 299 (410)
T ss_dssp CSEEEESSSCBBSSCHH----HHHHHHHHHHHTCCCTTEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEecCCcchhhcCHH----HHHHHHHHhhcccccccceeeEEecccChHHHHHHHHHHHHHhcCCceEE
Confidence 455555 366543221 12233445655444344677778999876777788899999999988764
No 195
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=22.49 E-value=1.5e+02 Score=29.82 Aligned_cols=26 Identities=19% Similarity=0.356 Sum_probs=21.6
Q ss_pred ceeeeccCch------hHHHhHhcCCcEEecc
Q 042987 362 GGFVTHCGWN------SVLEGVCAGVPMLAWP 387 (481)
Q Consensus 362 ~~~I~HgG~g------t~~eal~~GvP~l~~P 387 (481)
+++++|.|-| .+.||-+.++|+|++-
T Consensus 77 ~v~~~TsGpG~~N~~~gv~~A~~~~vPll~it 108 (590)
T 1ybh_A 77 GICIATSGPGATNLVSGLADALLDSVPLVAIT 108 (590)
T ss_dssp EEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred EEEEeccCchHHHHHHHHHHHHhhCCCEEEEe
Confidence 3489999966 6679999999999984
No 196
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=22.49 E-value=1.8e+02 Score=19.70 Aligned_cols=54 Identities=11% Similarity=0.094 Sum_probs=31.4
Q ss_pred ccCHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHH-hcCCCh-HHHHHHHHHHHH
Q 042987 418 LVSAAELEQRVSELMDSEKGRAVKERAVAMKEAAAAAM-RDGGSS-RVALDNLVESFK 473 (481)
Q Consensus 418 ~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~-~~~g~~-~~~~~~~~~~~~ 473 (481)
..+.++|.++|+++|.+.+...+ ..+++++.+.+.. +-+=+. ...++..++.+.
T Consensus 11 ~Psd~ei~~~I~~IL~~aDL~tv--T~K~VR~~Le~~~pg~dLs~kK~~I~~~I~~~L 66 (70)
T 1q1v_A 11 PPTDEELKETIKKLLASANLEEV--TMKQICKKVYENYPTYDLTERKDFIKTTVKELI 66 (70)
T ss_dssp CCCHHHHHHHHHHHHTTSCGGGC--CHHHHHHHHHHHCSSSCCSHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHhCCHHHH--hHHHHHHHHHHHccCCCChHHHHHHHHHHHHHH
Confidence 47899999999999986552222 2245666665443 323232 235666655543
No 197
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=22.45 E-value=2.5e+02 Score=23.23 Aligned_cols=64 Identities=22% Similarity=0.323 Sum_probs=38.5
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEcCCC
Q 042987 5 IVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQLPPP 72 (481)
Q Consensus 5 il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 72 (481)
|++++.+...+-.....+++.|++.| ++|.++......... ..+.+.+.. ....+-.+..+|..
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~g--i~v~~Ig~G~~~~~~-~l~~la~~~-n~~~~s~~~~~~~~ 173 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNN--VAIDIIHIGELQNES-ALQHFIDAA-NSSDSCHLVSIPPS 173 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTT--EEEEEEEESCC---C-HHHHHHHHH-CSTTCCEEEEECCC
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCC--CEEEEEEeCCCCccH-HHHHHHHhc-cCCCceEEEEecCc
Confidence 45555555567788889999999999 999988765443221 123333322 12335566666643
No 198
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=22.45 E-value=3e+02 Score=28.09 Aligned_cols=78 Identities=13% Similarity=0.154 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhc-CCCeEeeccc--------c--hhhhhcccCcc
Q 042987 294 QLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTK-DRGLVVESWA--------P--QVEVLNHESVG 362 (481)
Q Consensus 294 ~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~v~v~~~~--------p--~~~ll~~~~~~ 362 (481)
..+.+++.|++.|++.|+.+.+.. .+ .+.+.+. .+++....-. = +..+-+.+.+
T Consensus 84 ~a~~lv~~L~~~GV~~vFg~PG~~------------~~--pl~dal~~~~~i~~v~~~hE~~Aa~aAdGyAr~tGkpgv- 148 (677)
T 1t9b_A 84 GGQIFNEMMSRQNVDTVFGYPGGA------------IL--PVYDAIHNSDKFNFVLPKHEQGAGHMAEGYARASGKPGV- 148 (677)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCGG------------GH--HHHHHTTTCSSSEEECCSSHHHHHHHHHHHHHHHSSCEE-
T ss_pred HHHHHHHHHHHcCCCEEEEecCcc------------HH--HHHHHHHhCCCCeEEEeCChHHHHHHHHHHHHHHCCCEE-
Confidence 356688999999999988876631 01 1222221 1223221111 1 1112233444
Q ss_pred eeeeccCch------hHHHhHhcCCcEEecc
Q 042987 363 GFVTHCGWN------SVLEGVCAGVPMLAWP 387 (481)
Q Consensus 363 ~~I~HgG~g------t~~eal~~GvP~l~~P 387 (481)
+++|.|-| .+.||.+.++|+|++-
T Consensus 149 -v~~TsGpG~~N~~~gia~A~~d~vPllvIt 178 (677)
T 1t9b_A 149 -VLVTSGPGATNVVTPMADAFADGIPMVVFT 178 (677)
T ss_dssp -EEECSTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred -EEECCChHHHHHHHHHHHHHHcCCCEEEEe
Confidence 88999965 6789999999999985
No 199
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=22.35 E-value=17 Score=31.28 Aligned_cols=34 Identities=24% Similarity=0.251 Sum_probs=24.5
Q ss_pred CCccEEE-ECCCCc-chHHhhhhhcCCceEEEeccch
Q 042987 112 SNLKAFV-IDFFCN-PAFQVSSSTLSIPTYYYFTTAG 146 (481)
Q Consensus 112 ~~pD~VI-~D~~~~-~~~~~A~~~lgiP~v~~~~~~~ 146 (481)
..||+|| .|+..- -++.-| .++|||+|.++-+.+
T Consensus 148 ~~Pdllvv~Dp~~e~~ai~Ea-~~l~IP~IalvDTn~ 183 (218)
T 3r8n_B 148 GLPDALFVIDADHEHIAIKEA-NNLGIPVFAIVDTNS 183 (218)
T ss_dssp SCCCSCEEEETGGGHHHHHHH-HHHTCCCEEECCSSS
T ss_pred cCCCeEEecCcccccHHHHHH-HHhCCCEEEEEeCcC
Confidence 4688865 776443 355578 999999999876543
No 200
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=22.34 E-value=1.3e+02 Score=26.01 Aligned_cols=40 Identities=15% Similarity=0.053 Sum_probs=25.1
Q ss_pred HHHHHHHhhccCCccEEEECCCCcc-------hHHhhhhhcCCceEEEec
Q 042987 101 LHETLITISKRSNLKAFVIDFFCNP-------AFQVSSSTLSIPTYYYFT 143 (481)
Q Consensus 101 ~~~ll~~~~~~~~pD~VI~D~~~~~-------~~~~A~~~lgiP~v~~~~ 143 (481)
+.++++++. .+||+|++|..-.. +..+. ..+|+|+|.+.=
T Consensus 93 ~l~al~~L~--~~PdlllvDG~Gi~HpR~~GlA~HlG-v~l~~PtIGVAK 139 (225)
T 2w36_A 93 FLKAWEKLR--TKPDVVVFDGQGLAHPRKLGIASHMG-LFIEIPTIGVAK 139 (225)
T ss_dssp HHHHHTTCC--SCCSEEEEESCSSSSTTSCCHHHHHH-HHHTSCEEEEES
T ss_pred HHHHHHhcC--CCCCEEEEeCeEEEcCCCCCchhhhh-hhhCCCEEEEEe
Confidence 333444443 38999999975443 23345 557999999743
No 201
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=22.13 E-value=84 Score=26.77 Aligned_cols=39 Identities=13% Similarity=0.065 Sum_probs=30.6
Q ss_pred CCcEEEEEcC-CCccCHHHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 1 MKDTIVFYTS-PGRGHLNSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 1 m~~~il~~~~-p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
|.+.|.++.. |+-|=..=...||..|+++| ++|.++-..
T Consensus 1 M~~~i~v~s~kgGvGKTt~a~~LA~~la~~g--~~VlliD~D 40 (237)
T 1g3q_A 1 MGRIISIVSGKGGTGKTTVTANLSVALGDRG--RKVLAVDGD 40 (237)
T ss_dssp CCEEEEEECSSTTSSHHHHHHHHHHHHHHTT--CCEEEEECC
T ss_pred CceEEEEecCCCCCCHHHHHHHHHHHHHhcC--CeEEEEeCC
Confidence 5444555443 68899999999999999999 999998543
No 202
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=22.10 E-value=94 Score=27.32 Aligned_cols=39 Identities=5% Similarity=-0.055 Sum_probs=28.4
Q ss_pred HHHHHHHHhhccCCccEEEECCCCc------chHHhhhhhcCCceEEEec
Q 042987 100 KLHETLITISKRSNLKAFVIDFFCN------PAFQVSSSTLSIPTYYYFT 143 (481)
Q Consensus 100 ~~~~ll~~~~~~~~pD~VI~D~~~~------~~~~~A~~~lgiP~v~~~~ 143 (481)
.+.+++++. +||+|++..... .+..+| ++||+|.+...+
T Consensus 104 ~La~~i~~~----~~dlVl~G~~s~d~~~~~v~p~lA-~~L~~~~vt~v~ 148 (252)
T 1efp_B 104 ILAAVARAE----GTELIIAGKQAIDNDMNATGQMLA-AILGWAQATFAS 148 (252)
T ss_dssp HHHHHHHHH----TCSEEEEESCCTTTCCCCHHHHHH-HHHTCEEEEEEE
T ss_pred HHHHHHHhc----CCCEEEEcCCccCCchhhHHHHHH-HHhCCCccccEE
Confidence 444555554 899999765442 466688 999999999765
No 203
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=21.96 E-value=1.4e+02 Score=25.77 Aligned_cols=33 Identities=15% Similarity=0.071 Sum_probs=25.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIP 40 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~ 40 (481)
.+++++|.++.| + -.++|++|.++| ++|.++.-
T Consensus 7 ~k~vlVTGas~G-I--G~aia~~l~~~G--~~V~~~~r 39 (252)
T 3h7a_A 7 NATVAVIGAGDY-I--GAEIAKKFAAEG--FTVFAGRR 39 (252)
T ss_dssp SCEEEEECCSSH-H--HHHHHHHHHHTT--CEEEEEES
T ss_pred CCEEEEECCCch-H--HHHHHHHHHHCC--CEEEEEeC
Confidence 367888866654 3 568999999999 99988753
No 204
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=21.92 E-value=1.3e+02 Score=26.02 Aligned_cols=38 Identities=13% Similarity=0.165 Sum_probs=33.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTA 42 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~ 42 (481)
.+|++..-|+-|=..=++++|.+|.++| ++|.+.....
T Consensus 7 l~I~~~~kgGvGKTt~a~~la~~l~~~G--~~V~v~d~D~ 44 (228)
T 2r8r_A 7 LKVFLGAAPGVGKTYAMLQAAHAQLRQG--VRVMAGVVET 44 (228)
T ss_dssp EEEEEESSTTSSHHHHHHHHHHHHHHTT--CCEEEEECCC
T ss_pred EEEEEECCCCCcHHHHHHHHHHHHHHCC--CCEEEEEeCC
Confidence 4688888899999999999999999999 9998886554
No 205
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=21.89 E-value=77 Score=28.58 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=23.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 4 TIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 4 ~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
+|+++ |+.|.+- ..|+++|.++| |+|+.++-.
T Consensus 13 ~ilVt--GatG~iG--~~l~~~L~~~g--~~V~~l~R~ 44 (318)
T 2r6j_A 13 KILIF--GGTGYIG--NHMVKGSLKLG--HPTYVFTRP 44 (318)
T ss_dssp CEEEE--TTTSTTH--HHHHHHHHHTT--CCEEEEECT
T ss_pred eEEEE--CCCchHH--HHHHHHHHHCC--CcEEEEECC
Confidence 55544 5666663 57889999999 999988643
No 206
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=21.84 E-value=75 Score=26.68 Aligned_cols=37 Identities=3% Similarity=0.103 Sum_probs=30.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCC
Q 042987 3 DTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTA 42 (481)
Q Consensus 3 ~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~ 42 (481)
+||++.-.|+.|=.. ...|.+.|+++| ++|.++.+..
T Consensus 9 k~IllgvTGs~aa~k-~~~l~~~L~~~g--~~V~vv~T~~ 45 (194)
T 1p3y_1 9 KKLLIGICGSISSVG-ISSYLLYFKSFF--KEIRVVMTKT 45 (194)
T ss_dssp CEEEEEECSCGGGGG-THHHHHHHTTTS--SEEEEEECHH
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHHHCC--CEEEEEEchh
Confidence 588888888877775 789999999999 9999997653
No 207
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=21.72 E-value=3.7e+02 Score=24.51 Aligned_cols=111 Identities=16% Similarity=0.060 Sum_probs=58.5
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhC-CCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhc
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERS-GVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLN 357 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~ 357 (481)
+.+|+.|.+.. ..++.++.+. +..++.++..+ .. ..+.+.++. ++. .+-...++|.
T Consensus 30 igiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~----------~~--~~~~~a~~~---g~~--~~~~~~~ll~ 86 (350)
T 3rc1_A 30 VGVIGCADIAW------RRALPALEAEPLTEVTAIASRR----------WD--RAKRFTERF---GGE--PVEGYPALLE 86 (350)
T ss_dssp EEEESCCHHHH------HTHHHHHHHCTTEEEEEEEESS----------HH--HHHHHHHHH---CSE--EEESHHHHHT
T ss_pred EEEEcCcHHHH------HHHHHHHHhCCCeEEEEEEcCC----------HH--HHHHHHHHc---CCC--CcCCHHHHhc
Confidence 88888887752 1355666665 55655555432 00 001122222 222 2345667777
Q ss_pred ccCcceeeeccC----chhHHHhHhcCCcEEe-cccc--cchhHHHHHHHHHhceeeEeecC
Q 042987 358 HESVGGFVTHCG----WNSVLEGVCAGVPMLA-WPLY--AEQKMIRAVVVEEMKVGLAVTRS 412 (481)
Q Consensus 358 ~~~~~~~I~HgG----~gt~~eal~~GvP~l~-~P~~--~DQ~~na~~v~~~~G~G~~l~~~ 412 (481)
.+++++++---- .-.+.+|+.+|++++| -|+. .+|-.-...++++.|+-+.+...
T Consensus 87 ~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~ 148 (350)
T 3rc1_A 87 RDDVDAVYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFM 148 (350)
T ss_dssp CTTCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECG
T ss_pred CCCCCEEEECCCcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEec
Confidence 655544554222 2356688999999876 3664 34444333444555766665543
No 208
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=21.61 E-value=1.6e+02 Score=25.63 Aligned_cols=38 Identities=11% Similarity=0.077 Sum_probs=26.7
Q ss_pred CCcEEEEEcC-----CCccCHHHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 1 MKDTIVFYTS-----PGRGHLNSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 1 m~~~il~~~~-----p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
|.++|+++.. ++ --..=+......|++.| ++|+++++.
T Consensus 22 M~kkV~ill~~~~~~dG-~e~~E~~~p~~vL~~aG--~~V~~~S~~ 64 (242)
T 3l3b_A 22 MALNSAVILAGCGHMDG-SEIREAVLVMLELDRHN--VNFKCFAPN 64 (242)
T ss_dssp --CEEEEECCCSSTTTS-CCHHHHHHHHHHHHHTT--CEEEEEECS
T ss_pred ccCEEEEEEecCCCCCC-eeHHHHHHHHHHHHHCC--CEEEEEecC
Confidence 4468988876 33 24444666678888999 999999865
No 209
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=21.50 E-value=1.6e+02 Score=24.70 Aligned_cols=43 Identities=12% Similarity=0.042 Sum_probs=28.6
Q ss_pred Eeecccchh--hhhcccCcceeeeccCchhHHHhHh---------cCCcEEeccc
Q 042987 345 VVESWAPQV--EVLNHESVGGFVTHCGWNSVLEGVC---------AGVPMLAWPL 388 (481)
Q Consensus 345 ~v~~~~p~~--~ll~~~~~~~~I~HgG~gt~~eal~---------~GvP~l~~P~ 388 (481)
+++++.... .++.++++ .++--||.||.-|... +++|++++-.
T Consensus 102 i~~~~~~~Rk~~m~~~sda-~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~ 155 (199)
T 3qua_A 102 IVTDTMRERKREMEHRSDA-FIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDP 155 (199)
T ss_dssp EEESSHHHHHHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred EEcCCHHHHHHHHHHhcCc-cEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcC
Confidence 344555432 34455555 6778899999887743 6899998853
No 210
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=21.24 E-value=72 Score=27.26 Aligned_cols=63 Identities=10% Similarity=-0.001 Sum_probs=37.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCcchhhhhccCCCCCeeEEEc
Q 042987 4 TIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIIIPTAPFVSSAGTDDYIASVSATAPSVTFHQL 69 (481)
Q Consensus 4 ~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 69 (481)
++++++.|+ =+.|+++++++|.++++..+|+++-.....+.. .+.+.+.......++++++.+
T Consensus 104 ~~vliagG~--GitP~~~~l~~l~~~~~~~~v~l~~~~r~~~~~-~~~~el~~l~~~~~~~~~~~~ 166 (232)
T 1qfj_A 104 PMILIAGGT--GFSYARSILLTALARNPNRDITIYWGGREEQHL-YDLCELEALSLKHPGLQVVPV 166 (232)
T ss_dssp CEEEEEETT--CHHHHHHHHHHHHHHCTTCCEEEEEEESSGGGC-TTHHHHHHHHHHCTTEEEEEE
T ss_pred cEEEEEecc--cHhHHHHHHHHHHhcCCCCcEEEEEeeCCHHHh-hhHHHHHHHHHHCCCeEEEEE
Confidence 577777554 399999999999876533456665433222222 344444444333456776654
No 211
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=20.90 E-value=95 Score=24.75 Aligned_cols=28 Identities=4% Similarity=0.033 Sum_probs=22.4
Q ss_pred CccCHHHHHHHHHHHHhCCCCeEEEEEeCC
Q 042987 12 GRGHLNSMVELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 12 ~~GHv~P~l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
..-.+--.+-|+..|+++| |+|+++...
T Consensus 18 ~Pvq~p~~lYl~~~Lk~~G--~~v~VA~np 45 (157)
T 1kjn_A 18 SPVQIPLAIYTSHKLKKKG--FRVTVTANP 45 (157)
T ss_dssp STTHHHHHHHHHHHHHHTT--CEEEEEECH
T ss_pred CcchhhHHHHHHHHHHhcC--CeeEEecCH
Confidence 4445566788999999999 999999644
No 212
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=20.90 E-value=1.8e+02 Score=28.89 Aligned_cols=26 Identities=19% Similarity=0.240 Sum_probs=22.0
Q ss_pred ceeeeccCc------hhHHHhHhcCCcEEecc
Q 042987 362 GGFVTHCGW------NSVLEGVCAGVPMLAWP 387 (481)
Q Consensus 362 ~~~I~HgG~------gt~~eal~~GvP~l~~P 387 (481)
+++++|.|- +.+.||.+.++|+|++-
T Consensus 75 ~v~~~TsGpG~~N~~~~l~~A~~~~vPll~it 106 (566)
T 1ozh_A 75 GVALVTSGPGCSNLITGMATANSEGDPVVALG 106 (566)
T ss_dssp EEEEECSTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEccChHHHHHHHHHHHHHhcCCCEEEEe
Confidence 348999996 57789999999999984
No 213
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=20.81 E-value=84 Score=30.86 Aligned_cols=34 Identities=12% Similarity=0.054 Sum_probs=26.5
Q ss_pred HHHHHHHHhhccCCccEEEECCCCcchHHhhhhhcCCceEEE
Q 042987 100 KLHETLITISKRSNLKAFVIDFFCNPAFQVSSSTLSIPTYYY 141 (481)
Q Consensus 100 ~~~~ll~~~~~~~~pD~VI~D~~~~~~~~~A~~~lgiP~v~~ 141 (481)
.+++++++. +||++|... ....+| +++|||++.+
T Consensus 408 el~~~i~~~----~pDL~ig~~---~~~~ia-~k~gIP~~~~ 441 (492)
T 3u7q_A 408 EFEEFVKRI----KPDLIGSGI---KEKFIF-QKMGIPFREM 441 (492)
T ss_dssp HHHHHHHHH----CCSEEEECH---HHHHHH-HHTTCCEEES
T ss_pred HHHHHHHhc----CCcEEEeCc---chhHHH-HHcCCCEEec
Confidence 455667777 999999973 356789 9999999863
No 214
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=20.80 E-value=1.9e+02 Score=27.02 Aligned_cols=35 Identities=20% Similarity=0.232 Sum_probs=24.3
Q ss_pred EEEEecCCCcCCCHHHHHHHHHHHHhCCCeEEEEEeC
Q 042987 279 VLFLCFGSLGSFSSKQLKEMAIGLERSGVKFLWVVRA 315 (481)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 315 (481)
+++++.|+... ..-+..++++|.+.|.++.+.+..
T Consensus 23 Il~~~~~~~GH--v~p~l~La~~L~~~Gh~V~v~~~~ 57 (415)
T 3rsc_A 23 LLIVNVASHGL--ILPTLTVVTELVRRGHRVSYVTAG 57 (415)
T ss_dssp EEEECCSCHHH--HGGGHHHHHHHHHTTCEEEEEECG
T ss_pred EEEEeCCCccc--cccHHHHHHHHHHCCCEEEEEeCH
Confidence 77877776441 122456888888889998887743
No 215
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=20.80 E-value=19 Score=18.59 Aligned_cols=17 Identities=35% Similarity=0.628 Sum_probs=13.6
Q ss_pred CchhHHHhHhcCCcEEe
Q 042987 369 GWNSVLEGVCAGVPMLA 385 (481)
Q Consensus 369 G~gt~~eal~~GvP~l~ 385 (481)
|.|+++-.|..|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888888888888765
No 216
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=20.62 E-value=97 Score=26.56 Aligned_cols=34 Identities=15% Similarity=0.106 Sum_probs=24.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCCeEEEEEe
Q 042987 1 MKDTIVFYTSPGRGHLNSMVELGKLILTYHPCFSIDIII 39 (481)
Q Consensus 1 m~~~il~~~~p~~GHv~P~l~La~~L~~~G~~h~Vt~~~ 39 (481)
|..+++++|.++.| =-.+||++|.++| ++|.++.
T Consensus 1 Ms~k~vlVTGas~G---IG~a~a~~l~~~G--~~V~~~~ 34 (235)
T 3l6e_A 1 MSLGHIIVTGAGSG---LGRALTIGLVERG--HQVSMMG 34 (235)
T ss_dssp --CCEEEEESTTSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCCCEEEEECCCCH---HHHHHHHHHHHCC--CEEEEEE
Confidence 55567888866654 3468899999999 9998874
No 217
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=20.61 E-value=1.1e+02 Score=23.79 Aligned_cols=38 Identities=13% Similarity=0.265 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCccCHHHHHH-HHHHHHhCCCCeEEEEEeCC
Q 042987 2 KDTIVFYTSPGRGHLNSMVE-LGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 2 ~~~il~~~~p~~GHv~P~l~-La~~L~~~G~~h~Vt~~~~~ 41 (481)
+++|+++-+...|+..-+.. |++.|.++| ++|.+....
T Consensus 1 M~ki~I~y~S~tGnT~~~A~~ia~~l~~~g--~~v~~~~~~ 39 (148)
T 3f6r_A 1 MSKVLIVFGSSTGNTESIAQKLEELIAAGG--HEVTLLNAA 39 (148)
T ss_dssp -CEEEEEEECSSSHHHHHHHHHHHHHHTTT--CEEEEEETT
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhCC--CeEEEEehh
Confidence 03577766667888876554 678888889 999987543
No 218
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=20.57 E-value=1.5e+02 Score=23.13 Aligned_cols=39 Identities=8% Similarity=0.148 Sum_probs=27.5
Q ss_pred CCcEEEEEcCCCccCHHHH--HHHHHHHHhCCCCeEEEEEeCC
Q 042987 1 MKDTIVFYTSPGRGHLNSM--VELGKLILTYHPCFSIDIIIPT 41 (481)
Q Consensus 1 m~~~il~~~~p~~GHv~P~--l~La~~L~~~G~~h~Vt~~~~~ 41 (481)
|++-.++++.+-+|+.... +.+|.++...| |+|.++...
T Consensus 5 Mkk~~ivv~~~P~g~~~~~~al~~a~a~~a~~--~~v~Vff~~ 45 (136)
T 2hy5_B 5 VKKFMYLNRKAPYGTIYAWEALEVVLIGAAFD--QDVCVLFLD 45 (136)
T ss_dssp CCEEEEEECSCTTTSSHHHHHHHHHHHHGGGC--CEEEEEECG
T ss_pred hhEEEEEEeCCCCCcHHHHHHHHHHHHHHhCC--CCEEEEEEh
Confidence 4434555666777876555 66699999999 999888544
No 219
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=20.56 E-value=1.7e+02 Score=26.81 Aligned_cols=73 Identities=8% Similarity=0.068 Sum_probs=47.8
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcccCcceeeeccC
Q 042987 290 FSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNHESVGGFVTHCG 369 (481)
Q Consensus 290 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~~~~~~~I~HgG 369 (481)
.+.+....+.+++.+.+++.||.+.++.. -..+.++++...+-.++.. ||=+.-
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g------------------------~~rlL~~lD~~~i~~~PK~--~~GySD 115 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGYN------------------------SNGLLKYLDYDLIRENPKF--FCGYSD 115 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSC------------------------GGGGGGGCCHHHHHTSCCE--EEECGG
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcccccc------------------------HHHHHhhcChhHHHhCCeE--EEEecc
Confidence 34555778999999999999998876510 0113355555555556666 777777
Q ss_pred chhHHHhHh--cCCcEEeccc
Q 042987 370 WNSVLEGVC--AGVPMLAWPL 388 (481)
Q Consensus 370 ~gt~~eal~--~GvP~l~~P~ 388 (481)
..+++-+++ .|+..+-=|+
T Consensus 116 iTaL~~al~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 116 ITALNNAIYTKTGLVTYSGPH 136 (331)
T ss_dssp GHHHHHHHHHHHCBCEEECCC
T ss_pred hHHHHHHHHHhhCCcEEEccc
Confidence 777777776 4777776665
No 220
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=20.52 E-value=91 Score=23.47 Aligned_cols=65 Identities=11% Similarity=0.125 Sum_probs=44.0
Q ss_pred hcccCcceeeeccCchh---------HHHhHhcCCcEEecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHH
Q 042987 356 LNHESVGGFVTHCGWNS---------VLEGVCAGVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQ 426 (481)
Q Consensus 356 l~~~~~~~~I~HgG~gt---------~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~ 426 (481)
+..+++ +|--.|..| +-.|...|+|+|++=-++.+.. -..+. ..|..+-. ++.+.|.+
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~~-P~~l~---~~a~~iV~-------Wn~~~I~~ 102 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLENV-PPELE---AVSSEVVG-------WNPHCIRD 102 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSCC-CTTHH---HHCSEEEC-------SCHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCcC-CHHHH---hhCceecc-------CCHHHHHH
Confidence 355666 888888887 5578889999999877665411 11232 22333333 89999999
Q ss_pred HHHHHhc
Q 042987 427 RVSELMD 433 (481)
Q Consensus 427 ~i~~~l~ 433 (481)
+|+..+.
T Consensus 103 aI~~~~~ 109 (111)
T 1eiw_A 103 ALEDALD 109 (111)
T ss_dssp HHHHHHC
T ss_pred HHHhccC
Confidence 9988763
No 221
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=20.41 E-value=1.9e+02 Score=19.99 Aligned_cols=49 Identities=27% Similarity=0.356 Sum_probs=30.8
Q ss_pred cCCcEEecccccchhHHHHHHH--HHhceeeEeecCCccCcccCHHHHHHHHHHHhc
Q 042987 379 AGVPMLAWPLYAEQKMIRAVVV--EEMKVGLAVTRSEEKDRLVSAAELEQRVSELMD 433 (481)
Q Consensus 379 ~GvP~l~~P~~~DQ~~na~~v~--~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l~ 433 (481)
.|+|+++.--.+-|.+.-..-. ++-|+...+-+.+ .++++.+.+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakkegvsydvlkst------dpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKST------DPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEECC------CHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhcCcchhhhccC------CHHHHHHHHHHHHH
Confidence 5888888776665544221111 1227776666654 78888888888773
No 222
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=20.24 E-value=77 Score=29.25 Aligned_cols=37 Identities=11% Similarity=0.184 Sum_probs=23.5
Q ss_pred HHHHHHHHhhccCCccEEEECCCCcchH-HhhhhhcCCceEEEe
Q 042987 100 KLHETLITISKRSNLKAFVIDFFCNPAF-QVSSSTLSIPTYYYF 142 (481)
Q Consensus 100 ~~~~ll~~~~~~~~pD~VI~D~~~~~~~-~~A~~~lgiP~v~~~ 142 (481)
.++++++ + +||+||......... ... +.+|||++.+.
T Consensus 88 n~E~Ila-l----~PDLIi~~~~~~~~~~~~~-~~~GiPvv~~~ 125 (346)
T 2etv_A 88 DLESLIT-L----QPDVVFITYVDRXTAXDIQ-EXTGIPVVVLS 125 (346)
T ss_dssp CHHHHHH-H----CCSEEEEESCCHHHHHHHH-HHHTSCEEEEC
T ss_pred CHHHHhc-C----CCCEEEEeCCccchHHHHH-HhcCCcEEEEe
Confidence 4555544 4 999999765322122 245 67899999874
No 223
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=20.22 E-value=1.3e+02 Score=24.81 Aligned_cols=104 Identities=16% Similarity=0.201 Sum_probs=60.2
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEEeCCCCCCccccccccccCchhhHhhhcCCCeEeecccchhhhhcccCcceeeecc
Q 042987 289 SFSSKQLKEMAIGLERSGVKFLWVVRAPAPDSIENRSSLESLLPEGFLDRTKDRGLVVESWAPQVEVLNHESVGGFVTHC 368 (481)
Q Consensus 289 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~v~v~~~~p~~~ll~~~~~~~~I~Hg 368 (481)
...++.+.++++..+..+.++|.+..+. ...||.-....+ ...|+-++ - +.+ +=+
T Consensus 51 HR~p~~l~~~~~~a~~~g~~ViIa~AG~-----------aa~LpgvvA~~t-~~PVIgVP---~-------~~~---~l~ 105 (183)
T 1o4v_A 51 HRTPDRMFEYAKNAEERGIEVIIAGAGG-----------AAHLPGMVASIT-HLPVIGVP---V-------KTS---TLN 105 (183)
T ss_dssp TTCHHHHHHHHHHTTTTTCCEEEEEEES-----------SCCHHHHHHHHC-SSCEEEEE---E-------CCT---TTT
T ss_pred cCCHHHHHHHHHHHHhCCCcEEEEecCc-----------ccccHHHHHhcc-CCCEEEee---C-------CCC---CCC
Confidence 4567777888877777777777776543 344654222111 11121111 0 000 236
Q ss_pred CchhHHHhHhc--CCcEEecccccchhHHHHHHHHHhceeeEeecCCccCcccCHHHHHHHHHHHh
Q 042987 369 GWNSVLEGVCA--GVPMLAWPLYAEQKMIRAVVVEEMKVGLAVTRSEEKDRLVSAAELEQRVSELM 432 (481)
Q Consensus 369 G~gt~~eal~~--GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~l~~~i~~~l 432 (481)
|..+.+.-+.. |+|+ .-+..|-.+||..++-++ + . ++..+|.+++++..
T Consensus 106 G~dsLlSivqmP~GvpV--atV~Id~~~nAa~lAaqI-----l---a-----~~d~~l~~kL~~~r 156 (183)
T 1o4v_A 106 GLDSLFSIVQMPGGVPV--ATVAINNAKNAGILAASI-----L---G-----IKYPEIARKVKEYK 156 (183)
T ss_dssp THHHHHHHHTCCTTCCC--EECCTTCHHHHHHHHHHH-----H---H-----TTCHHHHHHHHHHH
T ss_pred cHHHHHHHhcCCCCCee--EEEecCCchHHHHHHHHH-----H---h-----cCCHHHHHHHHHHH
Confidence 77777777777 9993 334557888998886442 1 1 45667888777654
Done!