BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042991
(93 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZWS6|ARR6_ARATH Two-component response regulator ARR6 OS=Arabidopsis thaliana
GN=ARR6 PE=1 SV=2
Length = 186
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 61/106 (57%), Gaps = 26/106 (24%)
Query: 1 LNDSFVDRKVIERLLTISSSRDLYCSCSGRRALQFLGLDEEQSANGFD------VRTIYS 54
++DS VDRK IERLL +SS + + S RALQ+LGLD E+ + GF+ + T YS
Sbjct: 30 VDDSHVDRKFIERLLRVSSCK-VTVVDSATRALQYLGLDVEEKSVGFEDLKVNLIMTDYS 88
Query: 55 -------------------REIPVVIMSPEIILVRIDRYLEDGAED 81
RE+PVVIMS E IL RIDR LE+GAED
Sbjct: 89 MPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAED 134
>sp|Q9SB04|ARR5_ARATH Two-component response regulator ARR5 OS=Arabidopsis thaliana
GN=ARR5 PE=1 SV=2
Length = 184
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 61/107 (57%), Gaps = 27/107 (25%)
Query: 1 LNDSFVDRKVIERLLTISSSRDLYCSCSGRRALQFLGLD-EEQSANGFD------VRTIY 53
++DS VDRK IERLL +SS + + S RALQ+LGLD E S+ GF+ + T Y
Sbjct: 30 VDDSMVDRKFIERLLRVSSCK-VTVVDSATRALQYLGLDGENNSSVGFEDLKINLIMTDY 88
Query: 54 S-------------------REIPVVIMSPEIILVRIDRYLEDGAED 81
S REIPVVIMS E IL RIDR LE+GAED
Sbjct: 89 SMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAED 135
>sp|O82798|ARR4_ARATH Two-component response regulator ARR4 OS=Arabidopsis thaliana
GN=ARR4 PE=1 SV=1
Length = 259
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 61/106 (57%), Gaps = 26/106 (24%)
Query: 1 LNDSFVDRKVIERLLTISSSRDLYCSCSGRRALQFLGLDEEQSANGFD------VRTIYS 54
++DS VDR VIERLL I+S + + SG RAL+FLGLD E+++ FD + T Y
Sbjct: 39 VDDSLVDRIVIERLLRITSCK-VTAVDSGWRALEFLGLDNEKASAEFDRLKVDLIITDYC 97
Query: 55 -------------------REIPVVIMSPEIILVRIDRYLEDGAED 81
RE+PVVIMS E +L RIDR LE+GA+D
Sbjct: 98 MPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQD 143
>sp|Q9ZWS9|ARR3_ARATH Two-component response regulator ARR3 OS=Arabidopsis thaliana
GN=ARR3 PE=2 SV=1
Length = 231
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 62/106 (58%), Gaps = 26/106 (24%)
Query: 1 LNDSFVDRKVIERLLTISSSRDLYCSCSGRRALQFLGLDEEQSANGFD------VRTIYS 54
++DS VDR VIERLL I+S + + SG RAL+FLGLD++++A FD + T Y
Sbjct: 38 VDDSLVDRIVIERLLRITSCK-VTAVDSGWRALEFLGLDDDKAAVEFDRLKVDLIITDYC 96
Query: 55 -------------------REIPVVIMSPEIILVRIDRYLEDGAED 81
+E+PVVIMS E ++ RIDR LE+GAED
Sbjct: 97 MPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAED 142
>sp|Q7G8V2|ARR15_ARATH Two-component response regulator ARR15 OS=Arabidopsis thaliana
GN=ARR15 PE=1 SV=1
Length = 206
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 60/106 (56%), Gaps = 26/106 (24%)
Query: 1 LNDSFVDRKVIERLLTISSSRDLYCSCSGRRALQFLGLDEEQSANGFD------VRTIYS 54
++DSFVDRKVIERLL IS+ + + SG RALQ+LGLD + ++G + T YS
Sbjct: 23 VDDSFVDRKVIERLLKISACK-VTTVESGTRALQYLGLDGDNGSSGLKDLKVNLIVTDYS 81
Query: 55 -------------------REIPVVIMSPEIILVRIDRYLEDGAED 81
REIPVVIMS E I RI++ + +GAE+
Sbjct: 82 MPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEE 127
>sp|Q9ZWS7|ARR7_ARATH Two-component response regulator ARR7 OS=Arabidopsis thaliana
GN=ARR7 PE=1 SV=1
Length = 206
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 58/106 (54%), Gaps = 26/106 (24%)
Query: 1 LNDSFVDRKVIERLLTISSSRDLYCSCSGRRALQFLGLDEEQSANGFD------VRTIYS 54
++DS VDRKVIERLL ISS + + SG RALQ+LGLD + A+ + T YS
Sbjct: 29 VDDSIVDRKVIERLLRISSCK-VTTVESGTRALQYLGLDGGKGASNLKDLKVNLIVTDYS 87
Query: 55 -------------------REIPVVIMSPEIILVRIDRYLEDGAED 81
RE+PVVIMS E IL RI L++GAE+
Sbjct: 88 MPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEE 133
>sp|O80366|ARR9_ARATH Two-component response regulator ARR9 OS=Arabidopsis thaliana
GN=ARR9 PE=1 SV=1
Length = 234
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 36/116 (31%)
Query: 1 LNDSFVDRKVIERLLTISSSRDLYCSCSGRRALQFLGLDEEQSAN--------------- 45
++DS DRK+IERLL SS + + SG +AL+FLGL + +N
Sbjct: 14 VDDSLFDRKLIERLLQKSSCQ-VTTVDSGSKALEFLGLRQSTDSNDPNAFSKAPVNHQVV 72
Query: 46 ---------------GFDV-----RTIYSREIPVVIMSPEIILVRIDRYLEDGAED 81
G+D+ + R+IPVVIMS E + RI R LE+GAE+
Sbjct: 73 EVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEE 128
>sp|O80365|ARR8_ARATH Two-component response regulator ARR8 OS=Arabidopsis thaliana
GN=ARR8 PE=1 SV=1
Length = 225
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 34/114 (29%)
Query: 1 LNDSFVDRKVIERLLTISSSRDLYCSCSGRRALQFLGL---DEEQSA------------- 44
++DS DRK+IERLL SS + + SG +AL+FLGL D + +A
Sbjct: 14 VDDSLFDRKMIERLLQKSSCQ-VTTVDSGSKALEFLGLRVDDNDPNALSTSPQIHQEVEI 72
Query: 45 ------------NGFDV-----RTIYSREIPVVIMSPEIILVRIDRYLEDGAED 81
G+D+ + R IPVVIMS E + RI R LE+GAE+
Sbjct: 73 NLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEE 126
>sp|Q9FPR6|ARR17_ARATH Two-component response regulator ARR17 OS=Arabidopsis thaliana
GN=ARR17 PE=2 SV=1
Length = 153
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 27/106 (25%)
Query: 1 LNDSFVDRKVIERLLTISSSRDLYCSCSGRRALQFLGLDEEQSA----NGFDVRTIYS-- 54
++D+ +DRK++ER+L ISS + + + +G RAL++LGL + Q N V I +
Sbjct: 25 VDDNLIDRKLVERILKISSCK-VTTAENGLRALEYLGLGDPQQTDSLTNVMKVNLIITDY 83
Query: 55 --------------------REIPVVIMSPEIILVRIDRYLEDGAE 80
+E+PVVI+S E I RI++ L GA+
Sbjct: 84 CMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLASGAQ 129
>sp|Q9SHC2|ARR16_ARATH Two-component response regulator ARR16 OS=Arabidopsis thaliana
GN=ARR16 PE=1 SV=1
Length = 164
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 29/108 (26%)
Query: 1 LNDSFVDRKVIERLLTISSSRDLYCSCSGRRALQFLGL-DEEQ-----SANGFDVRTIYS 54
++D+ +DRK++ERLL IS + + + + RAL++LGL D+ Q + N V I +
Sbjct: 34 VDDNLIDRKLVERLLKISCCK-VTTAENALRALEYLGLGDQNQHIDALTCNVMKVSLIIT 92
Query: 55 ----------------------REIPVVIMSPEIILVRIDRYLEDGAE 80
RE+PVVIMS E I RI++ L GA+
Sbjct: 93 DYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQ 140
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,019,510
Number of Sequences: 539616
Number of extensions: 1139501
Number of successful extensions: 2137
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2109
Number of HSP's gapped (non-prelim): 15
length of query: 93
length of database: 191,569,459
effective HSP length: 63
effective length of query: 30
effective length of database: 157,573,651
effective search space: 4727209530
effective search space used: 4727209530
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)