Your job contains 1 sequence.
>042996
MDLSSISDDLAEINGQITDIFRALSNGFQKLEKIKDVNRQSRQLEELTDKMRECKRLIKE
FDREVKDIEGRNDPETNKMLSEKKQSMVKELNSYVALKKQHQTNLENNKRVDLFDGPNEG
FAEDNVLLASSMTNQQLMDSGNRMMDETDQAIERSKQVVHETINVGTETAAVLKAQTEQM
SRIVNELDSIHFSIKKASQLVKEIGRQVATDKCIMAMLFLIVIGVIAIIIVKLVNPNNKD
IRDIPGLAPPAMARRLLSNPR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042996
(261 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2063459 - symbol:NPSN11 "AT2G35190" species:37... 978 1.7e-98 1
TAIR|locus:2093601 - symbol:NPSN13 "AT3G17440" species:37... 850 6.2e-85 1
TAIR|locus:2007730 - symbol:NPSN12 "AT1G48240" species:37... 838 1.2e-83 1
UNIPROTKB|E1BUX5 - symbol:VTI1B "Uncharacterized protein"... 165 1.5e-11 1
DICTYBASE|DDB_G0285365 - symbol:DDB_G0285365 species:4468... 144 2.4e-08 1
GENEDB_PFALCIPARUM|PF14_0464 - symbol:PF14_0464 "hypothet... 145 2.8e-08 1
UNIPROTKB|Q8IKY7 - symbol:PfVti1 "SNARE protein, putative... 145 2.8e-08 1
ZFIN|ZDB-GENE-040426-1148 - symbol:vti1b "vesicle transpo... 138 1.2e-07 1
UNIPROTKB|F1N1Z0 - symbol:VTI1B "Vesicle transport throug... 135 3.6e-07 1
UNIPROTKB|Q2KIU0 - symbol:VTI1B "Vesicle transport throug... 135 3.6e-07 1
UNIPROTKB|Q9UEU0 - symbol:VTI1B "Vesicle transport throug... 133 6.3e-07 1
MGI|MGI:1855688 - symbol:Vti1b "vesicle transport through... 133 6.3e-07 1
RGD|1560475 - symbol:RGD1560475 "similar to vesicle trans... 132 8.6e-07 1
UNIPROTKB|P58200 - symbol:Vti1b "Vesicle transport throug... 132 8.6e-07 1
UNIPROTKB|F1SA25 - symbol:VTI1B "Uncharacterized protein"... 127 3.5e-06 1
DICTYBASE|DDB_G0292974 - symbol:vti1A "v-SNARE family pro... 126 3.6e-06 1
UNIPROTKB|J9NYA0 - symbol:VTI1B "Uncharacterized protein"... 126 4.7e-06 1
UNIPROTKB|E1BUF3 - symbol:HMMR "Uncharacterized protein" ... 127 3.1e-05 1
RGD|621490 - symbol:Vti1a "vesicle transport through inte... 118 4.0e-05 1
UNIPROTKB|P85120 - symbol:ccdc88c "Daple-like protein" sp... 130 5.1e-05 1
UNIPROTKB|I3LUP5 - symbol:I3LUP5 "Synaptosomal-associated... 95 0.00023 1
UNIPROTKB|Q8VXD2 - symbol:p70 "P70 protein" species:4097 ... 115 0.00060 1
UNIPROTKB|Q8NB25 - symbol:FAM184A "Protein FAM184A" speci... 118 0.00061 1
RGD|2323682 - symbol:LOC100359512 "vesicle transport thro... 108 0.00069 1
>TAIR|locus:2063459 [details] [associations]
symbol:NPSN11 "AT2G35190" species:3702 "Arabidopsis
thaliana" [GO:0008565 "protein transporter activity" evidence=ISS]
[GO:0000910 "cytokinesis" evidence=TAS] [GO:0005484 "SNAP receptor
activity" evidence=ISS] [GO:0009504 "cell plate" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] InterPro:IPR000727 PROSITE:PS50192
SMART:SM00397 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0015031 GO:GO:0007049 GO:GO:0000910
EMBL:AC004667 GO:GO:0009504 GO:GO:0005484 EMBL:AF439822
EMBL:AY143839 IPI:IPI00536174 PIR:F84765 RefSeq:NP_565800.1
UniGene:At.12726 ProteinModelPortal:Q944A9 SMR:Q944A9 STRING:Q944A9
PaxDb:Q944A9 PRIDE:Q944A9 EnsemblPlants:AT2G35190.1 GeneID:818086
KEGG:ath:AT2G35190 GeneFarm:4289 TAIR:At2g35190 eggNOG:NOG74354
HOGENOM:HOG000240078 InParanoid:Q944A9 KO:K08494 OMA:ATDRCIM
ProtClustDB:CLSN2917238 Genevestigator:Q944A9 GermOnline:AT2G35190
InterPro:IPR005606 Pfam:PF03908 Uniprot:Q944A9
Length = 265
Score = 978 (349.3 bits), Expect = 1.7e-98, P = 1.7e-98
Identities = 195/263 (74%), Positives = 225/263 (85%)
Query: 1 MD-LSSISDDLAEINGQITDIFRALSNGFQKLEKIKDVNRQSRQLEELTDKMRECKRLIK 59
MD +S++S++LAEI GQI DIFRALSNGFQKLEKIKD NRQSRQLEELTDKMR+CK LIK
Sbjct: 1 MDPISAVSEELAEIEGQINDIFRALSNGFQKLEKIKDANRQSRQLEELTDKMRDCKSLIK 60
Query: 60 EFDREVKDIEGRNDPETNKMLSEKKQSMVKELNSYVALKKQHQTNL-ENNKRVDLFDGPN 118
+FDRE+K +E ND TN+ML++++QSMVKELNSYVALKK++ +NL NNKRVDLFDGP
Sbjct: 61 DFDREIKSLESGNDASTNRMLNDRRQSMVKELNSYVALKKKYSSNLASNNKRVDLFDGPG 120
Query: 119 EGFAEDNVLLASSMTNQQLMDSGNRMMDETDQAIERSKQVVHETINVGTETAAVLKAQTE 178
E E+NVLLAS+M+NQ+LMD GN MMD+TDQAIER K++V ETINVGT+T+A LKAQTE
Sbjct: 121 EEHMEENVLLASNMSNQELMDKGNSMMDDTDQAIERGKKIVQETINVGTDTSAALKAQTE 180
Query: 179 QMSRIVNELDSIHFSIKKASQLVKEIGRQVATDKCIMAMLFLXXXXXXXXXXXKLVNPNN 238
QMSR+VNELDSIHFS+KKAS+LVKEIGRQVATDKCIMA LFL K+VNPNN
Sbjct: 181 QMSRVVNELDSIHFSLKKASKLVKEIGRQVATDKCIMAFLFLIVIGVIAIIIVKIVNPNN 240
Query: 239 KDIRDIPG--LAPPAMARRLLSN 259
KDIRDIPG LAPPAM RRLL N
Sbjct: 241 KDIRDIPGVGLAPPAMNRRLLWN 263
>TAIR|locus:2093601 [details] [associations]
symbol:NPSN13 "AT3G17440" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA]
InterPro:IPR000727 PROSITE:PS50192 GO:GO:0016021 GO:GO:0005886
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0015031
HOGENOM:HOG000240078 eggNOG:NOG314799 ProtClustDB:CLSN2688488
EMBL:AB028620 EMBL:AY099622 EMBL:BT001249 EMBL:AY084645
IPI:IPI00536090 RefSeq:NP_566578.1 UniGene:At.5879
ProteinModelPortal:Q9LRP1 SMR:Q9LRP1 IntAct:Q9LRP1 PRIDE:Q9LRP1
EnsemblPlants:AT3G17440.1 GeneID:821008 KEGG:ath:AT3G17440
GeneFarm:4291 TAIR:At3g17440 InParanoid:Q9LRP1 OMA:PQLEQIH
PhylomeDB:Q9LRP1 Genevestigator:Q9LRP1 Uniprot:Q9LRP1
Length = 269
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 172/256 (67%), Positives = 208/256 (81%)
Query: 6 ISDDLAEINGQITDIFRALSNGFQKLEKIKDVNRQSRQLEELTDKMRECKRLIKEFDREV 65
+S L +I+G+I D FRAL+NGFQ+L+KIKD RQS+QLEELTDKMRECKRL+KEFDRE+
Sbjct: 7 MSPQLEQIHGEIRDHFRALANGFQRLDKIKDSTRQSKQLEELTDKMRECKRLVKEFDREL 66
Query: 66 KDIEGRNDPETNKMLSEKKQSMVKELNSYVALKKQHQTNLENNKRVDLFD---GPN-EGF 121
KD E RN PE NK L+++KQSM+KELNSYVAL+K + + L NK+V+LFD G + E
Sbjct: 67 KDEEARNSPEVNKQLNDEKQSMIKELNSYVALRKTYMSTL-GNKKVELFDMGAGVSGEPT 125
Query: 122 AEDNVLLASSMTNQQLMDSGNRMMDETDQAIERSKQVVHETINVGTETAAVLKAQTEQMS 181
AE+NV +ASSM+NQ+L+D+G + MDETDQAIERSKQVV +T+ VGT+TAA LK QT+QM
Sbjct: 126 AEENVQVASSMSNQELVDAGMKRMDETDQAIERSKQVVEQTLEVGTQTAANLKGQTDQMG 185
Query: 182 RIVNELDSIHFSIKKASQLVKEIGRQVATDKCIMAMLFLXXXXXXXXXXXKLVNPNNKDI 241
R+VN LD+I FSIKKASQLVKEIGRQVATDKCIM LFL K+VNPNNKDI
Sbjct: 186 RVVNHLDTIQFSIKKASQLVKEIGRQVATDKCIMGFLFLIVCGVVAIIIVKIVNPNNKDI 245
Query: 242 RDIPGLAPPAMARRLL 257
RDIPGLAPPA +R+LL
Sbjct: 246 RDIPGLAPPAQSRKLL 261
>TAIR|locus:2007730 [details] [associations]
symbol:NPSN12 "AT1G48240" species:3702 "Arabidopsis
thaliana" [GO:0008565 "protein transporter activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0016020 "membrane"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] InterPro:IPR000727 PROSITE:PS50192
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0009506 GO:GO:0015031 EMBL:AC023673 EMBL:AC007932
HOGENOM:HOG000240078 KO:K08494 EMBL:AF487545 EMBL:BT005271
IPI:IPI00542183 PIR:C96522 RefSeq:NP_175258.2 UniGene:At.38454
ProteinModelPortal:Q9LNH6 SMR:Q9LNH6 IntAct:Q9LNH6 PaxDb:Q9LNH6
PRIDE:Q9LNH6 EnsemblPlants:AT1G48240.1 GeneID:841244
KEGG:ath:AT1G48240 GeneFarm:4290 TAIR:At1g48240 eggNOG:NOG314799
InParanoid:Q9LNH6 OMA:FDTGNDQ PhylomeDB:Q9LNH6
ProtClustDB:CLSN2688488 Genevestigator:Q9LNH6 GermOnline:AT1G48240
Uniprot:Q9LNH6
Length = 265
Score = 838 (300.0 bits), Expect = 1.2e-83, P = 1.2e-83
Identities = 167/256 (65%), Positives = 210/256 (82%)
Query: 6 ISDDLAEINGQITDIFRALSNGFQKLEKIKDVNRQSRQLEELTDKMRECKRLIKEFDREV 65
+S L +I+G+I D FRAL+NGFQ+L+KIKD +RQS+QLEEL +KMR+CKRL+KEFDRE+
Sbjct: 7 MSPHLEQIHGEIRDHFRALANGFQRLDKIKDSSRQSKQLEELAEKMRDCKRLVKEFDREL 66
Query: 66 KDIEGRNDPETNKMLSEKKQSMVKELNSYVALKKQHQTNLENNKRVDLFD---GPN-EGF 121
KD E RN P+ NK L+++KQSM+KELNSYVAL+K + L NK+V+LFD G + E
Sbjct: 67 KDGEARNSPQVNKQLNDEKQSMIKELNSYVALRKTYLNTL-GNKKVELFDTGAGVSGEPT 125
Query: 122 AEDNVLLASSMTNQQLMDSGNRMMDETDQAIERSKQVVHETINVGTETAAVLKAQTEQMS 181
AE+NV +AS+M+NQ+L+D+G + MDETDQAIERSKQVVH+T+ VGT+TA+ LK QT+QM
Sbjct: 126 AEENVQMASTMSNQELVDAGMKRMDETDQAIERSKQVVHQTLEVGTQTASNLKGQTDQMG 185
Query: 182 RIVNELDSIHFSIKKASQLVKEIGRQVATDKCIMAMLFLXXXXXXXXXXXKLVNPNNKDI 241
R+VN+LD+I FS+KKASQLVKEIGRQVATDKCIMA LFL K+VNPNNKDI
Sbjct: 186 RVVNDLDTIQFSLKKASQLVKEIGRQVATDKCIMAFLFLIVCGVIAIIIVKIVNPNNKDI 245
Query: 242 RDIPGLAPPAMARRLL 257
RDIPGLAPPA +R+LL
Sbjct: 246 RDIPGLAPPAQSRKLL 261
>UNIPROTKB|E1BUX5 [details] [associations]
symbol:VTI1B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 PROSITE:PS50192 SMART:SM00397
GO:GO:0005794 GO:GO:0006886 GO:GO:0016020 GO:GO:0016192
SUPFAM:SSF47661 KO:K08493 GeneTree:ENSGT00530000063466 CTD:10490
OMA:MMSKLRT EMBL:AADN02003184 IPI:IPI00572560 RefSeq:XP_421192.1
Ensembl:ENSGALT00000015509 GeneID:423273 KEGG:gga:423273
NextBio:20825766 Uniprot:E1BUX5
Length = 232
Score = 165 (63.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 46/208 (22%), Positives = 105/208 (50%)
Query: 16 QITDIFRALSNGFQKL-EKIKD--VNRQSRQLEELTDKMRECKRLIKEFDREVKDIEGRN 72
++ +IFR L + + E+++ + + + E +K RE ++E + E+K
Sbjct: 14 RLHEIFRGLHGELRGVPERLRGGAAEEKKKLIREFDEKQREANETLREMEEELKYAPL-- 71
Query: 73 DPETNKMLSEKKQSMVKELNSYVALKKQHQTNLENNKRVDLFDGPNEGFAEDNVLLASSM 132
P N+M+S K ++ ++L+ + K L + D+ G F+ +N +
Sbjct: 72 -PFRNQMMS-KIRAYRRDLSMFQREMKNTDLGLGPGSQGDMKYGI---FSTENEQSTNLQ 126
Query: 133 TNQQLMDSGNRMMDETDQAIERSKQVVHETINVGTETAAVLKAQTEQMSRIVNELDSIHF 192
+ + L+ G ++ Q+IERS ++ ET +GT+ L Q EQ+ R + L +
Sbjct: 127 SQRVLLLQGTESLNRASQSIERSHRIAAETDQIGTDIIEELGEQREQLERTKSRLVNTSE 186
Query: 193 SIKKASQLVKEIGRQVATDKCIMAMLFL 220
++ K+ ++++ + R++AT+K +++++ +
Sbjct: 187 NLSKSRKILRSMSRRIATNKLLLSIIII 214
>DICTYBASE|DDB_G0285365 [details] [associations]
symbol:DDB_G0285365 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000727 PROSITE:PS50192 dictyBase:DDB_G0285365
EMBL:AAFI02000079 eggNOG:NOG74354 KO:K08494 RefSeq:XP_638268.1
ProteinModelPortal:Q54NB2 EnsemblProtists:DDB0186473 GeneID:8625076
KEGG:ddi:DDB_G0285365 InParanoid:Q54NB2 OMA:ENDLNWA Uniprot:Q54NB2
Length = 232
Score = 144 (55.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 49/234 (20%), Positives = 100/234 (42%)
Query: 9 DLAEINGQITDIFRALSNGFQKLEKIKDVNRQSRQLEELTDKMRECKRLIKEFDREVKDI 68
DL E I R + G + L K K E L +++ K++++ + + +++
Sbjct: 3 DLQENEMDFEKIVREVEIGIKDLSKNKRGIEARGGAELLRNRIGRAKQILRSYKLDFREL 62
Query: 69 EGRNDPETNKMLSEKKQSMVKELNSYVALKKQHQTNLENNKRVDLFDGPNEGFAEDNVLL 128
+N+ + + + + + +K L + + ++ N EN G G + N
Sbjct: 63 -AKNEQKPYQDKANQYEEQIKTLENDLNWAEK---NSEN--------GGGGGGSGGNNSQ 110
Query: 129 ASSMTNQQLMDSGNRMMDETDQAIERSKQVVHETINVGTETAAVLKAQTEQMSRIVNELD 188
+ Q+ M ++ + R V + VGT T + Q EQM RI +++
Sbjct: 111 SIDTEYQETMQKAKKIQQQDIDTTHRILSEVGQINEVGTSTLEEMAVQEEQMKRIQKDME 170
Query: 189 SIHFSIKKASQLVKEIGRQVATDKCIMAMLFLXXXXXXXXXXXKLVNPNNKDIR 242
I ++K A++ ++ R++ATDK IM ++ L +V P +K ++
Sbjct: 171 EIDGNLKLATRQMRAFARKMATDKLIMGLVLLIVAAIIFVIVYSIVKPKSKTVQ 224
>GENEDB_PFALCIPARUM|PF14_0464 [details] [associations]
symbol:PF14_0464 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000727 PROSITE:PS50192 EMBL:AE014187
GenomeReviews:AE014187_GR KO:K08494 RefSeq:XP_001348638.1
HSSP:Q12241 ProteinModelPortal:Q8IKY7 IntAct:Q8IKY7
MINT:MINT-1740784 EnsemblProtists:PF14_0464:mRNA GeneID:812046
KEGG:pfa:PF14_0464 EuPathDB:PlasmoDB:PF3D7_1448600 OMA:IRNINES
ProtClustDB:CLSZ2433524 Uniprot:Q8IKY7
Length = 253
Score = 145 (56.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 54/213 (25%), Positives = 101/213 (47%)
Query: 12 EINGQITDIFRALSNGFQKLEKIKDVNRQSRQLEELTDKMRECKRLIKEFDREVKD---I 68
EIN + D R L Q+LEK ++V E T+K I E + KD I
Sbjct: 10 EINNLLEDFKRIL----QELEK-EEVKN------EKTEKYCNDIHFINERIKTAKDAYFI 58
Query: 69 EGRNDPETNKMLSEKKQSMVKELNSYVALKKQH-QTNLENNKRVDLFDGPNEGFAEDNVL 127
E RN E E+ +++ K N + L+ + Q + + +K + ++ + +L
Sbjct: 59 EIRNLSE-----EEQIENISKIKNKMIILENLNIQFDFKKSKLI--YEEDKQAKENKKLL 111
Query: 128 LASSMTNQQLMDSGNRMMDETDQAIERSKQVVHETINVGTETAAVLKAQTEQMSRIVNEL 187
++ + + G+ + D+TD AI R K +V E+ N+ + A L Q E++ + +++
Sbjct: 112 KVRYVSAKDIETKGDIIQDQTDDAIFRMKMMVDESENITKDAADKLNIQNEKLQKARDKI 171
Query: 188 DSIHFSIKKASQLVKEIGRQVATDKCIMAMLFL 220
+ + ++ A Q +KEI ++ TD+ + M L
Sbjct: 172 EDVDINVYSAKQTLKEIAKEAVTDRFVRLMSIL 204
>UNIPROTKB|Q8IKY7 [details] [associations]
symbol:PfVti1 "SNARE protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000727 PROSITE:PS50192 EMBL:AE014187
GenomeReviews:AE014187_GR KO:K08494 RefSeq:XP_001348638.1
HSSP:Q12241 ProteinModelPortal:Q8IKY7 IntAct:Q8IKY7
MINT:MINT-1740784 EnsemblProtists:PF14_0464:mRNA GeneID:812046
KEGG:pfa:PF14_0464 EuPathDB:PlasmoDB:PF3D7_1448600 OMA:IRNINES
ProtClustDB:CLSZ2433524 Uniprot:Q8IKY7
Length = 253
Score = 145 (56.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 54/213 (25%), Positives = 101/213 (47%)
Query: 12 EINGQITDIFRALSNGFQKLEKIKDVNRQSRQLEELTDKMRECKRLIKEFDREVKD---I 68
EIN + D R L Q+LEK ++V E T+K I E + KD I
Sbjct: 10 EINNLLEDFKRIL----QELEK-EEVKN------EKTEKYCNDIHFINERIKTAKDAYFI 58
Query: 69 EGRNDPETNKMLSEKKQSMVKELNSYVALKKQH-QTNLENNKRVDLFDGPNEGFAEDNVL 127
E RN E E+ +++ K N + L+ + Q + + +K + ++ + +L
Sbjct: 59 EIRNLSE-----EEQIENISKIKNKMIILENLNIQFDFKKSKLI--YEEDKQAKENKKLL 111
Query: 128 LASSMTNQQLMDSGNRMMDETDQAIERSKQVVHETINVGTETAAVLKAQTEQMSRIVNEL 187
++ + + G+ + D+TD AI R K +V E+ N+ + A L Q E++ + +++
Sbjct: 112 KVRYVSAKDIETKGDIIQDQTDDAIFRMKMMVDESENITKDAADKLNIQNEKLQKARDKI 171
Query: 188 DSIHFSIKKASQLVKEIGRQVATDKCIMAMLFL 220
+ + ++ A Q +KEI ++ TD+ + M L
Sbjct: 172 EDVDINVYSAKQTLKEIAKEAVTDRFVRLMSIL 204
>ZFIN|ZDB-GENE-040426-1148 [details] [associations]
symbol:vti1b "vesicle transport through
interaction with t-SNAREs homolog 1B (yeast)" species:7955 "Danio
rerio" [GO:0016020 "membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 PROSITE:PS50192
SMART:SM00397 ZFIN:ZDB-GENE-040426-1148 GO:GO:0006886 GO:GO:0016020
GO:GO:0016192 GO:GO:0005622 SUPFAM:SSF47661 HOGENOM:HOG000116573
KO:K08493 GeneTree:ENSGT00530000063466 CTD:10490 HOVERGEN:HBG058837
OrthoDB:EOG4M399K OMA:MMSKLRT EMBL:BX470227 EMBL:BC055131
IPI:IPI00498607 RefSeq:NP_957330.1 UniGene:Dr.82463 SMR:Q7SY45
STRING:Q7SY45 Ensembl:ENSDART00000057379 GeneID:394011
KEGG:dre:394011 InParanoid:Q7SY45 NextBio:20814976 Uniprot:Q7SY45
Length = 225
Score = 138 (53.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 41/207 (19%), Positives = 99/207 (47%)
Query: 25 SNGFQKL-EKIKDVNRQSRQLEELTDKMR--ECKRLIKEFDREVKDIEGRNDPETNKMLS 81
S F+KL E K + + + + E K + E KR++++FD V + E ++
Sbjct: 3 SEEFEKLHEMYKSLYDEVKLMPERVQKSQGEERKRIVRDFDERVSEAEEVLQGMEQELFG 62
Query: 82 EKKQSMVKELNSYVALKKQHQTNLENNKRVDLFDGPNEGFAEDNVLLASSMTNQQ----- 136
S +++ + L ++ L+ + R+ G + + + +S +Q
Sbjct: 63 APS-SFRTPMSTKIRLYRRDLAKLQRDIRLSATPGLTGQLGDSRLGVYASQNDQSTHLQS 121
Query: 137 ---LMDSGNRMMDETDQAIERSKQVVHETINVGTETAAVLKAQTEQMSRIVNELDSIHFS 193
L+ G ++ ++IERS+++ ET +GT+ L Q EQ+ R + L + +
Sbjct: 122 QRALLIQGTESLNNASKSIERSQRIAAETDQIGTDIIEELGEQREQLDRTRDRLVNTGEN 181
Query: 194 IKKASQLVKEIGRQVATDKCIMAMLFL 220
+ ++ ++++ + R++ T+K +++++ +
Sbjct: 182 LSRSRKILRAMSRRIVTNKLLLSIIII 208
>UNIPROTKB|F1N1Z0 [details] [associations]
symbol:VTI1B "Vesicle transport through interaction with
t-SNAREs homolog 1B" species:9913 "Bos taurus" [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
GO:GO:0005794 GO:GO:0006886 GO:GO:0016020 GO:GO:0016192
SUPFAM:SSF47661 GeneTree:ENSGT00530000063466 IPI:IPI00708043
UniGene:Bt.2175 OMA:MMSKLRT EMBL:DAAA02029474
Ensembl:ENSBTAT00000002532 Uniprot:F1N1Z0
Length = 232
Score = 135 (52.6 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 52/212 (24%), Positives = 102/212 (48%)
Query: 23 ALSNGFQKLEKI-KDVNRQSRQLEELTDKM---RECKRLIKEFD---REVKDIEGRNDPE 75
A S F+KL +I + ++ R + E M E K+LI++FD +E + + E
Sbjct: 6 ASSEHFEKLHEIFRGLHEDLRGVPERLLGMAGTEEKKKLIRDFDEKQQEANETLAEMEEE 65
Query: 76 TNKMLSEKKQSMVKELNSYVA-LKKQHQ----TNLENNK--RVDLFDGPNEGFAEDNVLL 128
+ M+ +L +Y L K H+ T L R D+ G +A +N +
Sbjct: 66 LRYAPLSFRNPMMSKLRTYRKDLAKLHREVRSTPLTATPGARGDMKYGT---YAVENEHM 122
Query: 129 ASSMTNQQLMDSGNRMMDETDQAIERSKQVVHETINVGTETAAVLKAQTEQMSRIVNELD 188
+ + L+ G ++ Q+IERS ++ ET +G+E L Q +Q+ R + L
Sbjct: 123 NRLQSQRALLLQGTDSLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQLERTKSRLV 182
Query: 189 SIHFSIKKASQLVKEIGRQVATDKCIMAMLFL 220
+ ++ K+ ++++ + R+V T+K +++++ L
Sbjct: 183 NTSENLSKSRKILRSMSRKVTTNKLLLSIVIL 214
>UNIPROTKB|Q2KIU0 [details] [associations]
symbol:VTI1B "Vesicle transport through interaction with
t-SNAREs homolog 1B" species:9913 "Bos taurus" [GO:0012505
"endomembrane system" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 GO:GO:0016021
GO:GO:0006886 GO:GO:0016192 GO:GO:0012505 GO:GO:0005622
SUPFAM:SSF47661 HOGENOM:HOG000116573 KO:K08493 EMBL:BC112511
IPI:IPI00708043 RefSeq:NP_001073115.1 UniGene:Bt.2175
ProteinModelPortal:Q2KIU0 SMR:Q2KIU0 STRING:Q2KIU0 PRIDE:Q2KIU0
GeneID:780809 KEGG:bta:780809 CTD:10490 eggNOG:NOG291765
HOVERGEN:HBG058837 InParanoid:Q2KIU0 OrthoDB:EOG4M399K
NextBio:20924499 Uniprot:Q2KIU0
Length = 232
Score = 135 (52.6 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 52/212 (24%), Positives = 102/212 (48%)
Query: 23 ALSNGFQKLEKI-KDVNRQSRQLEELTDKM---RECKRLIKEFD---REVKDIEGRNDPE 75
A S F+KL +I + ++ R + E M E K+LI++FD +E + + E
Sbjct: 6 ASSEHFEKLHEIFRGLHEDLRGVPERLLGMAGTEEKKKLIRDFDEKQQEANETLAEMEEE 65
Query: 76 TNKMLSEKKQSMVKELNSYVA-LKKQHQ----TNLENNK--RVDLFDGPNEGFAEDNVLL 128
+ M+ +L +Y L K H+ T L R D+ G +A +N +
Sbjct: 66 LRYAPLSFRNPMMSKLRTYRKDLAKLHREVRSTPLTATPGARGDMKYGT---YAVENEHM 122
Query: 129 ASSMTNQQLMDSGNRMMDETDQAIERSKQVVHETINVGTETAAVLKAQTEQMSRIVNELD 188
+ + L+ G ++ Q+IERS ++ ET +G+E L Q +Q+ R + L
Sbjct: 123 NRLQSQRALLLQGTDSLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQLERTKSRLV 182
Query: 189 SIHFSIKKASQLVKEIGRQVATDKCIMAMLFL 220
+ ++ K+ ++++ + R+V T+K +++++ L
Sbjct: 183 NTSENLSKSRKILRSMSRKVTTNKLLLSIVIL 214
>UNIPROTKB|Q9UEU0 [details] [associations]
symbol:VTI1B "Vesicle transport through interaction with
t-SNAREs homolog 1B" species:9606 "Homo sapiens" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0012505 "endomembrane
system" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0016192 "vesicle-mediated transport" evidence=TAS] [GO:0006904
"vesicle docking involved in exocytosis" evidence=TAS] [GO:0006944
"cellular membrane fusion" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 GO:GO:0016021
GO:GO:0005794 GO:GO:0006886 GO:GO:0008283 GO:GO:0012505
GO:GO:0006944 GO:GO:0031201 GO:GO:0006904 PDB:2V8S PDBsum:2V8S
SUPFAM:SSF47661 HOGENOM:HOG000116573 KO:K08493 CTD:10490
eggNOG:NOG291765 HOVERGEN:HBG058837 OrthoDB:EOG4M399K EMBL:AF035824
EMBL:AF060902 EMBL:CR456757 EMBL:CR542095 EMBL:BT019348
EMBL:BC003142 IPI:IPI00063784 IPI:IPI00386818 RefSeq:NP_006361.1
UniGene:Hs.741177 ProteinModelPortal:Q9UEU0 SMR:Q9UEU0
IntAct:Q9UEU0 MINT:MINT-1429590 STRING:Q9UEU0 PhosphoSite:Q9UEU0
DMDM:126302613 PaxDb:Q9UEU0 PRIDE:Q9UEU0 DNASU:10490
Ensembl:ENST00000554659 GeneID:10490 KEGG:hsa:10490 UCSC:uc001xjt.3
GeneCards:GC14M068117 HGNC:HGNC:17793 MIM:603207 neXtProt:NX_Q9UEU0
PharmGKB:PA134861090 InParanoid:Q9UEU0 OMA:MMSKLRT PhylomeDB:Q9UEU0
ChiTaRS:VTI1B EvolutionaryTrace:Q9UEU0 GenomeRNAi:10490
NextBio:39804 ArrayExpress:Q9UEU0 Bgee:Q9UEU0 Genevestigator:Q9UEU0
GermOnline:ENSG00000100568 Uniprot:Q9UEU0
Length = 232
Score = 133 (51.9 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 47/210 (22%), Positives = 101/210 (48%)
Query: 23 ALSNGFQKLEKI-KDVNRQSRQLEEL---TDKMRECKRLIKEFD---REVKDIEGRNDPE 75
A S F+KL +I + ++ + + E T E K+LI++FD +E + + E
Sbjct: 6 ASSEHFEKLHEIFRGLHEDLQGVPERLLGTAGTEEKKKLIRDFDEKQQEANETLAEMEEE 65
Query: 76 TNKMLSEKKQSMVKELNSYVA-LKKQHQTNLENNKRVDLFDGPNE---G-FAEDNVLLAS 130
+ M+ +L +Y L K H+ + + G + G +A +N +
Sbjct: 66 LRYAPLSFRNPMMSKLRNYRKDLAKLHR-EVRSTPLTATPGGRGDMKYGIYAVENEHMNR 124
Query: 131 SMTNQQLMDSGNRMMDETDQAIERSKQVVHETINVGTETAAVLKAQTEQMSRIVNELDSI 190
+ + ++ G ++ Q+IERS ++ ET +G+E L Q +Q+ R + L +
Sbjct: 125 LQSQRAMLLQGTESLNRATQSIERSHRIATETDQIGSEIIEELGEQRDQLERTKSRLVNT 184
Query: 191 HFSIKKASQLVKEIGRQVATDKCIMAMLFL 220
++ K+ ++++ + R+V T+K +++++ L
Sbjct: 185 SENLSKSRKILRSMSRKVTTNKLLLSIIIL 214
>MGI|MGI:1855688 [details] [associations]
symbol:Vti1b "vesicle transport through interaction with
t-SNAREs 1B" species:10090 "Mus musculus" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
MGI:MGI:1855688 GO:GO:0016021 GO:GO:0005794 GO:GO:0048471
GO:GO:0006886 GO:GO:0016192 SUPFAM:SSF47661 PDB:1GL2 PDBsum:1GL2
HOGENOM:HOG000116573 eggNOG:NOG291765 HOVERGEN:HBG058837
OrthoDB:EOG4M399K ChiTaRS:VTI1B EMBL:AF035208 IPI:IPI00130115
UniGene:Mm.265929 PDB:2QYW PDBsum:2QYW ProteinModelPortal:O88384
SMR:O88384 DIP:DIP-32212N IntAct:O88384 STRING:O88384
PhosphoSite:O88384 PaxDb:O88384 PRIDE:O88384 InParanoid:O88384
EvolutionaryTrace:O88384 Genevestigator:O88384
GermOnline:ENSMUSG00000021124 Uniprot:O88384
Length = 232
Score = 133 (51.9 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 52/212 (24%), Positives = 101/212 (47%)
Query: 23 ALSNGFQKLEKI-KDVNRQSRQLEEL---TDKMRECKRLIKEFD---REVKDIEGRNDPE 75
A S F+KL +I + + + + E T E K+L+++FD +E + + E
Sbjct: 6 ASSEHFEKLHEIFRGLLEDLQGVPERLLGTAGTEEKKKLVRDFDENQQEANETLAEMEEE 65
Query: 76 TNKMLSEKKQSMVKELNSYVA-LKKQHQ----TNLEN--NKRVDLFDGPNEGFAEDNVLL 128
+ M+ +L +Y L K H+ T L R DL G + +N L
Sbjct: 66 LRYAPLTFRNPMMSKLRNYRKDLAKLHREVRSTPLTAAPGGRGDLKYGT---YTLENEHL 122
Query: 129 ASSMTNQQLMDSGNRMMDETDQAIERSKQVVHETINVGTETAAVLKAQTEQMSRIVNELD 188
+ + L+ G ++ Q+IERS ++ ET +GTE L Q +Q+ R + L
Sbjct: 123 NRLQSQRALLLQGTESLNRATQSIERSHRIATETDQIGTEIIEELGEQRDQLERTKSRLV 182
Query: 189 SIHFSIKKASQLVKEIGRQVATDKCIMAMLFL 220
+ + ++ K+ ++++ + R+V T+K +++++ L
Sbjct: 183 NTNENLSKSRKILRSMSRKVITNKLLLSVIIL 214
>RGD|1560475 [details] [associations]
symbol:RGD1560475 "similar to vesicle transport through
interaction with t-SNAREs 1B homolog" species:10116 "Rattus
norvegicus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0012505
"endomembrane system" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031201
"SNARE complex" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 RGD:1560475
GO:GO:0016021 GO:GO:0005794 GO:GO:0006886 GO:GO:0016192
GO:GO:0012505 GO:GO:0031201 SUPFAM:SSF47661 HOGENOM:HOG000116573
HOVERGEN:HBG058837 OrthoDB:EOG4M399K EMBL:AC111403 EMBL:BF413866
IPI:IPI00197618 ProteinModelPortal:P58200 SMR:P58200 STRING:P58200
PRIDE:P58200 eggNOG:NOG114817 InParanoid:P58200 ArrayExpress:P58200
Genevestigator:P58200 Uniprot:P58200
Length = 232
Score = 132 (51.5 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 51/212 (24%), Positives = 102/212 (48%)
Query: 23 ALSNGFQKLEKI-KDVNRQSRQLEEL---TDKMRECKRLIKEFD---REVKDIEGRNDPE 75
A S F+KL +I + + + + E T E K+L+++FD +E + + E
Sbjct: 6 ASSEHFEKLHEIFRGLLEDLQGVPERLLGTAGTEEKKKLVRDFDEKQQEANETLAEMEEE 65
Query: 76 TNKMLSEKKQSMVKELNSYVA-LKKQHQ----TNLENNK--RVDLFDGPNEGFAEDNVLL 128
+ SM+ +L +Y L K H+ T L R DL G + +N L
Sbjct: 66 LRYAPLTFRNSMMSKLRNYRKDLAKLHREVRSTPLTATPGGRGDLKFGT---YTLENEHL 122
Query: 129 ASSMTNQQLMDSGNRMMDETDQAIERSKQVVHETINVGTETAAVLKAQTEQMSRIVNELD 188
+ + L+ G ++ Q+IERS ++ ET +G+E L Q +Q+ R + L
Sbjct: 123 NRLQSQRALLLQGTESLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQLERTKSRLV 182
Query: 189 SIHFSIKKASQLVKEIGRQVATDKCIMAMLFL 220
+ + ++ K+ ++++ + R+V T+K +++++ +
Sbjct: 183 NTNENLSKSRKILRSMSRKVITNKLLLSVIIV 214
>UNIPROTKB|P58200 [details] [associations]
symbol:Vti1b "Vesicle transport through interaction with
t-SNAREs homolog 1B" species:10116 "Rattus norvegicus" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
RGD:1560475 GO:GO:0016021 GO:GO:0005794 GO:GO:0006886 GO:GO:0016192
GO:GO:0012505 GO:GO:0031201 SUPFAM:SSF47661 HOGENOM:HOG000116573
HOVERGEN:HBG058837 OrthoDB:EOG4M399K EMBL:AC111403 EMBL:BF413866
IPI:IPI00197618 ProteinModelPortal:P58200 SMR:P58200 STRING:P58200
PRIDE:P58200 eggNOG:NOG114817 InParanoid:P58200 ArrayExpress:P58200
Genevestigator:P58200 Uniprot:P58200
Length = 232
Score = 132 (51.5 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 51/212 (24%), Positives = 102/212 (48%)
Query: 23 ALSNGFQKLEKI-KDVNRQSRQLEEL---TDKMRECKRLIKEFD---REVKDIEGRNDPE 75
A S F+KL +I + + + + E T E K+L+++FD +E + + E
Sbjct: 6 ASSEHFEKLHEIFRGLLEDLQGVPERLLGTAGTEEKKKLVRDFDEKQQEANETLAEMEEE 65
Query: 76 TNKMLSEKKQSMVKELNSYVA-LKKQHQ----TNLENNK--RVDLFDGPNEGFAEDNVLL 128
+ SM+ +L +Y L K H+ T L R DL G + +N L
Sbjct: 66 LRYAPLTFRNSMMSKLRNYRKDLAKLHREVRSTPLTATPGGRGDLKFGT---YTLENEHL 122
Query: 129 ASSMTNQQLMDSGNRMMDETDQAIERSKQVVHETINVGTETAAVLKAQTEQMSRIVNELD 188
+ + L+ G ++ Q+IERS ++ ET +G+E L Q +Q+ R + L
Sbjct: 123 NRLQSQRALLLQGTESLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQLERTKSRLV 182
Query: 189 SIHFSIKKASQLVKEIGRQVATDKCIMAMLFL 220
+ + ++ K+ ++++ + R+V T+K +++++ +
Sbjct: 183 NTNENLSKSRKILRSMSRKVITNKLLLSVIIV 214
>UNIPROTKB|F1SA25 [details] [associations]
symbol:VTI1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 GO:GO:0005794
GO:GO:0006886 GO:GO:0016020 GO:GO:0016192 SUPFAM:SSF47661
GeneTree:ENSGT00530000063466 OMA:MMSKLRT EMBL:CT868701
Ensembl:ENSSSCT00000002556 Uniprot:F1SA25
Length = 232
Score = 127 (49.8 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 43/211 (20%), Positives = 101/211 (47%)
Query: 16 QITDIFRALSNGF----QKLEKIKDVNRQSRQLEELTDKMRECKRLIKEFDREVK--DIE 69
++ +IFR L ++L I + + + + +K +E + E + E++ +
Sbjct: 13 KLHEIFRGLHEDLRGVPERLLGIAGTEEKKKLIRDFDEKQQEANETLAEMEEELRYAPLS 72
Query: 70 GRNDPETNKMLSEKKQSMVKELNSYVALKKQHQTNLENNKRVDLFDGPNEGFAEDNVLLA 129
RN P +K+ + +K + +L+ V + R D+ G +A ++ +
Sbjct: 73 FRN-PMMSKLRTYRKD--LAKLHREV---RSTPLTAAPGGRGDMKYGT---YAVEDEHMN 123
Query: 130 SSMTNQQLMDSGNRMMDETDQAIERSKQVVHETINVGTETAAVLKAQTEQMSRIVNELDS 189
+ + L+ G ++ Q+IERS ++ ET +G+E L Q +Q+ R + L +
Sbjct: 124 RLQSQRVLLLQGTDSLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQLERTKSRLVN 183
Query: 190 IHFSIKKASQLVKEIGRQVATDKCIMAMLFL 220
++ K+ ++++ + R+V T+K +++++ L
Sbjct: 184 TSENLSKSRKILRSMSRKVTTNKLLLSIVIL 214
>DICTYBASE|DDB_G0292974 [details] [associations]
symbol:vti1A "v-SNARE family protein" species:44689
"Dictyostelium discoideum" [GO:0031201 "SNARE complex"
evidence=IDA] [GO:0000331 "contractile vacuole" evidence=IDA]
[GO:0032010 "phagolysosome" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=IEA;IDA] [GO:0010008
"endosome membrane" evidence=IEA;IDA] [GO:0006906 "vesicle fusion"
evidence=IDA] [GO:0005768 "endosome" evidence=IEA;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0016020 "membrane"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0030665 "clathrin-coated vesicle membrane" evidence=IEA]
[GO:0030658 "transport vesicle membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 PROSITE:PS50192
dictyBase:DDB_G0292974 GO:GO:0016021 GO:GO:0006886
GenomeReviews:CM000155_GR GO:GO:0005789 EMBL:AAFI02000197
GO:GO:0010008 GO:GO:0032010 GO:GO:0000331 GO:GO:0030658
GO:GO:0030665 GO:GO:0031201 GO:GO:0006906 SUPFAM:SSF47661
eggNOG:NOG239679 KO:K08493 RefSeq:XP_629410.1
ProteinModelPortal:Q54CK6 IntAct:Q54CK6 STRING:Q54CK6 PRIDE:Q54CK6
EnsemblProtists:DDB0231536 GeneID:8628929 KEGG:ddi:DDB_G0292974
OMA:FERTEQN ProtClustDB:CLSZ2429346 Uniprot:Q54CK6
Length = 217
Score = 126 (49.4 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 50/211 (23%), Positives = 100/211 (47%)
Query: 19 DIFRALSNGFQKLEKIKDVNRQSRQL-----EELTDKMRECKRLIKEFDREVKDIE--GR 71
D+F FQ + + R+ +QL E+ +RE + I E + + ++E +
Sbjct: 2 DVFERTEQNFQHV--CNSITRRIKQLPNYGGEKKKIAVREVENDIDEALKFISEMEKLAQ 59
Query: 72 NDPETNKMLSEKKQSMVKELNSYVALKKQHQ-TNLENNKRVDLFDGPNEGFAEDNVLLAS 130
N P+ K+ ++ KQ ++ Y K++ Q L+++ + + P +D S
Sbjct: 60 NHPQRIKLQTKTKQYH-SDIQKY---KREVQLAQLQSSNQTN--SNPWSNAPDD---YQS 110
Query: 131 SMTNQ-QLMDSGNRMMDETDQAIERSKQVVHETINVGTETAAVLKAQTEQMSRIVNELDS 189
NQ Q + G+ M+D T + R+ Q+ ++ +G L Q EQ+ + ++L
Sbjct: 111 QYDNQRQHLLQGSNMLDSTSDRLLRTHQISAQSEQIGQNILMDLGKQGEQIRGMRDKLHE 170
Query: 190 IHFSIKKASQLVKEIGRQVATDKCIMAMLFL 220
IK A +++ I R++AT+K I++++ L
Sbjct: 171 TDDQIKSARKIMTGIARRLATNKVILSIIIL 201
>UNIPROTKB|J9NYA0 [details] [associations]
symbol:VTI1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
GO:GO:0006886 GO:GO:0016020 GO:GO:0016192 GO:GO:0005622
SUPFAM:SSF47661 GeneTree:ENSGT00530000063466 OMA:MMSKLRT
EMBL:AAEX03015851 Ensembl:ENSCAFT00000012309 Uniprot:J9NYA0
Length = 232
Score = 126 (49.4 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 49/210 (23%), Positives = 100/210 (47%)
Query: 25 SNGFQKLEKI-KDVNRQSRQLEELTDKM---RECKRLIKEFDREVKDIEG---RNDPETN 77
S F+KL +I + ++ R + E M E K+LI++FD + ++ + E
Sbjct: 8 SEHFEKLHEIFRGLHEDLRGVPERLLGMAGTEEKKQLIRDFDEKQQEANATLAEMEEELR 67
Query: 78 KMLSEKKQSMVKELNSYVA-LKKQHQ----TNLENNK--RVDLFDGPNEGFAEDNVLLAS 130
+ M+ +L +Y L K H+ T L R D+ G +A +N +
Sbjct: 68 YAPLSFRNPMMSKLRTYRKDLAKPHREVSSTPLTATPGGRGDMKYG---SYAVENEHMTR 124
Query: 131 SMTNQQLMDSGNRMMDETDQAIERSKQVVHETINVGTETAAVLKAQTEQMSRIVNELDSI 190
+ + L+ G ++ ++IERS ++ ET +G+E L Q +Q+ R + L +
Sbjct: 125 LQSQRALLLQGTDSLNRATRSIERSHRIATETDQIGSEIIEELGEQCDQLERTKSRLVNT 184
Query: 191 HFSIKKASQLVKEIGRQVATDKCIMAMLFL 220
++ K+ ++++ + R+V T K +++++ L
Sbjct: 185 SDNLSKSRKILRSMSRKVTTSKQLLSIVIL 214
>UNIPROTKB|E1BUF3 [details] [associations]
symbol:HMMR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005540 "hyaluronic acid binding" evidence=IEA]
InterPro:IPR026203 GO:GO:0005540 PANTHER:PTHR18956
GeneTree:ENSGT00390000007135 EMBL:AADN02035885 IPI:IPI00581660
Ensembl:ENSGALT00000002670 OMA:QEEHSNT Uniprot:E1BUF3
Length = 687
Score = 127 (49.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 48/228 (21%), Positives = 99/228 (43%)
Query: 1 MDLSSISDDLAEINGQITDIFRALSNGFQKLEKIKDVNRQSRQLEELTD---------KM 51
M L + DL G++ + LS + EK++D + + LE +T+ K
Sbjct: 194 MKLQEVQRDLEHSKGKVALLKEKLSA--TEREKVEDKSDTEKLLEYITELSSVAEAAEKY 251
Query: 52 R-ECKRLIKEFDREVKDIEGRNDPETNKMLSEKKQSMVKELNSYVALKKQHQTNLENNKR 110
+ + R+ + ++ +DIE + K E+ ++++ LN L +Q + + R
Sbjct: 252 KLDVARMEETLTKKDRDIEILREALRTK--EEESNTLIRALNERCDLLEQEKERESSESR 309
Query: 111 VDLFDGPNEGFAEDNVLLASSMTNQQLMDSGNRMMDETDQAIERSKQVVHETINVGTETA 170
+ E A +L +Q+L+ ++ + Q E S + + +N+ E
Sbjct: 310 GKVLSMNAEIEALKKQILVEEQEHQKLLQKQEELISQLQQEREMSASMHQKLLNLQDEVT 369
Query: 171 AVLKAQTEQMSRIVNELDSIHFSIKKASQLVKEIGRQVATDKCIMAML 218
+ E++ +NELD +H KKA +LVK + ++ + +A +
Sbjct: 370 SERCLLEEELKCAMNELDKLHAKEKKAEKLVKLLEKETKSKALELAQM 417
>RGD|621490 [details] [associations]
symbol:Vti1a "vesicle transport through interaction with t-SNAREs
1A" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0005484 "SNAP receptor activity" evidence=ISO]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IDA] [GO:0008021
"synaptic vesicle" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030136
"clathrin-coated vesicle" evidence=IDA] [GO:0030672 "synaptic
vesicle membrane" evidence=IEA] [GO:0031201 "SNARE complex"
evidence=IDA] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=ISO;ISS] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0048280 "vesicle fusion with Golgi apparatus" evidence=IDA]
InterPro:IPR000727 InterPro:IPR007705 InterPro:IPR010989
Pfam:PF05008 SMART:SM00397 RGD:621490 GO:GO:0016021 GO:GO:0006886
GO:GO:0000139 GO:GO:0030054 GO:GO:0043025 GO:GO:0008021
GO:GO:0030672 GO:GO:0006888 GO:GO:0031201 GO:GO:0042147
GO:GO:0048280 SUPFAM:SSF47661 PDB:2NPS PDBsum:2NPS eggNOG:NOG239679
HOGENOM:HOG000116573 KO:K08493 CTD:143187 HOVERGEN:HBG104027
EMBL:AF262222 EMBL:AF262221 IPI:IPI00199945 IPI:IPI00324090
RefSeq:NP_075589.1 UniGene:Rn.154408 ProteinModelPortal:Q9JI51
SMR:Q9JI51 MINT:MINT-5225883 STRING:Q9JI51 PRIDE:Q9JI51
GeneID:65277 KEGG:rno:65277 UCSC:RGD:621490
EvolutionaryTrace:Q9JI51 NextBio:614244 ArrayExpress:Q9JI51
Genevestigator:Q9JI51 Uniprot:Q9JI51
Length = 224
Score = 118 (46.6 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 47/217 (21%), Positives = 96/217 (44%)
Query: 2 DLSSISDDLAEINGQITDIFRALSNGFQKLEKIKDVNRQSRQLEELTDKMRECKRLIKEF 61
D D A + +IT + EK + V +QLEE RE L+++
Sbjct: 4 DFEGYEQDFAVLTAEITSKISRVPR-LPPDEKKQMVANVEKQLEEA----RE---LLEQM 55
Query: 62 DREVKDIEGRNDPETNKMLSEKKQSMVKELNSYVALKKQHQTNLENNKRVDLFDGPNEGF 121
D EV++I P++ M S + +S +E+ K+ + + R +L + G
Sbjct: 56 DLEVREIP----PQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNELLG--DAGN 109
Query: 122 AEDNVLLASSMTNQQLMDSGNRMMDETDQAIERSKQVVHETINVGTETAAVLKAQTEQMS 181
+ +N L+ L+D+ R+ + + + +E Q+ ET +G E L E++
Sbjct: 110 SSENQLIKLREERAHLLDNTERL-ERSSRRLEAGYQIAVETEQIGQEMLENLSHDRERIQ 168
Query: 182 RIVNELDSIHFSIKKASQLVKEIGRQVATDKCIMAML 218
R L ++ K+S+++ + R++ ++ ++ +L
Sbjct: 169 RARERLRETDANLGKSSRILTGMLRRIIQNRILLVIL 205
>UNIPROTKB|P85120 [details] [associations]
symbol:ccdc88c "Daple-like protein" species:8355 "Xenopus
laevis" [GO:0001736 "establishment of planar polarity"
evidence=IMP] [GO:0007257 "activation of JUN kinase activity"
evidence=IMP] [GO:0009950 "dorsal/ventral axis specification"
evidence=IMP] [GO:0030165 "PDZ domain binding" evidence=ISS]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IGI] [GO:0060071 "Wnt receptor signaling pathway, planar
cell polarity pathway" evidence=IMP] InterPro:IPR008636
Pfam:PF05622 GO:GO:0005737 GO:GO:0000226 GO:GO:0030165
GO:GO:0001736 GO:GO:0060070 GO:GO:0007257 GO:GO:0009950
GO:GO:0060071 HOVERGEN:HBG057867 ProteinModelPortal:P85120
PRIDE:P85120 Xenbase:XB-GENE-6487050 Uniprot:P85120
Length = 2058
Score = 130 (50.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 48/213 (22%), Positives = 107/213 (50%)
Query: 1 MDLSSISDDLAEINGQITDIFRALSNGFQKLEKIKDVNRQSRQLEELTDKMRECKRLIKE 60
+DL S+S+DL + Q++ + + QK +IK++ ++++ L + + +R+ ++ E
Sbjct: 524 LDLESLSEDLLKEKDQLSQALENIKS--QKERQIKELEQENKHLIQTLEAVRQRSQVSTE 581
Query: 61 FDREVKDIEGRND--PETNKMLSEKKQSMVKELNSYVALKKQHQTNLENNKRVDLFDGPN 118
VKDIE N ET K S K + E L+K + E +++D +
Sbjct: 582 --ARVKDIEMENRILHETIKDTSSKMNELEYEKKQ---LQKAFDQSKEQVEKLDKMEKEV 636
Query: 119 EGFAEDNVLLASSMTNQQLMDSGNRMMDETDQAIERSKQVVHETI----NVGTETAAVLK 174
+ N +L +T+ ++++ + +++ ++ +E V+ +++ NV T VL+
Sbjct: 637 HRLEKQNEILTKKVTSIKIVEEKMQGLEKENEVLEGENIVLKKSLDTLQNV-TIKLEVLE 695
Query: 175 AQTEQMSRIVNEL----DSIHFSIKKASQLVKE 203
++ +Q+ EL +++ FS K++Q+ +E
Sbjct: 696 SENKQLDEENLELRRAVEAMRFSCAKSTQIERE 728
>UNIPROTKB|I3LUP5 [details] [associations]
symbol:I3LUP5 "Synaptosomal-associated protein"
species:9823 "Sus scrofa" [GO:0070032 "synaptobrevin
2-SNAP-25-syntaxin-1a-complexin I complex" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0031083 "BLOC-1 complex"
evidence=IEA] [GO:0007269 "neurotransmitter secretion"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=IEA]
[GO:0000149 "SNARE binding" evidence=IEA] [GO:0043005 "neuron
projection" evidence=IEA] InterPro:IPR000727 PROSITE:PS50192
SMART:SM00397 GO:GO:0048471 GO:GO:0043005 GO:GO:0045202
GO:GO:0005802 GO:GO:0007269 GO:GO:0070032 InterPro:IPR000928
Pfam:PF00835 GeneTree:ENSGT00390000012186
Ensembl:ENSSSCT00000029702 Uniprot:I3LUP5
Length = 130
Score = 95 (38.5 bits), Expect = 0.00023, P = 0.00023
Identities = 19/72 (26%), Positives = 42/72 (58%)
Query: 135 QQLMDSGNRMMDETDQAIERSKQVVHETINVGTETAAVLKAQTEQMSRIVNELDSIHFSI 194
+++ +++ DE+ ++ R Q+V E+ + G T +L Q EQ+ RI +D I+ +
Sbjct: 6 EEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMDQINKDM 65
Query: 195 KKASQLVKEIGR 206
K+A + + ++G+
Sbjct: 66 KEAEKNLTDLGK 77
>UNIPROTKB|Q8VXD2 [details] [associations]
symbol:p70 "P70 protein" species:4097 "Nicotiana tabacum"
[GO:0051219 "phosphoprotein binding" evidence=IPI] EMBL:AJ310997
ProteinModelPortal:Q8VXD2 Uniprot:Q8VXD2
Length = 601
Score = 115 (45.5 bits), Expect = 0.00060, P = 0.00060
Identities = 46/167 (27%), Positives = 79/167 (47%)
Query: 32 EKIKDVNRQSRQLE-ELTDKMRECKRLIKEFDREV--KDIEGRNDPETNKMLS---EKKQ 85
E ++ +S Q E E K+ E K ++E ++ K+ E +N + NK LS E+ Q
Sbjct: 350 ELVERTKSESTQREAEWEAKLNETKSEVQELKEKLMNKEAELQNISDENKGLSLHVEQMQ 409
Query: 86 SMVKELNSYVALKKQHQTNLENNKRVDLFDGPNE--GFAEDNVLLASSMTNQQLMDSGNR 143
S KE LK+ ++ + R +L D NE E+N LL S + ++ +
Sbjct: 410 SADKEFELSAQLKQSE--SISGDLRGNLLDKENELQSLMEENELLKSEIGKRE--SESTK 465
Query: 144 MMDETDQAIERSKQVVHET-INVGTETAAVLKAQTEQMSRIVNELDS 189
M DE +E +K E I +G T ++ + +++R+ ELD+
Sbjct: 466 MSDEALALVEAAKTAESEALIKLGDLTEEADRS-SRKVARVTEELDA 511
>UNIPROTKB|Q8NB25 [details] [associations]
symbol:FAM184A "Protein FAM184A" species:9606 "Homo
sapiens" [GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] EMBL:CH471051 EMBL:BX538186 EMBL:AL137009
EMBL:AL132874 EMBL:AL365275 EMBL:AK024004 EMBL:AK091682
EMBL:BC009055 EMBL:AL136767 IPI:IPI00647504 IPI:IPI00746850
IPI:IPI00874044 IPI:IPI00914049 RefSeq:NP_001093881.1
RefSeq:NP_078857.5 UniGene:Hs.443789 ProteinModelPortal:Q8NB25
STRING:Q8NB25 PhosphoSite:Q8NB25 DMDM:209572754 PaxDb:Q8NB25
PRIDE:Q8NB25 DNASU:79632 Ensembl:ENST00000338891
Ensembl:ENST00000352896 Ensembl:ENST00000521531 GeneID:79632
KEGG:hsa:79632 UCSC:uc003pyj.3 UCSC:uc003pyl.4 CTD:79632
GeneCards:GC06M119280 HGNC:HGNC:20991 HPA:HPA034571
neXtProt:NX_Q8NB25 PharmGKB:PA164719768 eggNOG:NOG138283
HOGENOM:HOG000090031 HOVERGEN:HBG050909 InParanoid:Q8NB25
OMA:RQQHEET OrthoDB:EOG4ZGPBM ChiTaRS:FAM184A GenomeRNAi:79632
NextBio:68735 ArrayExpress:Q8NB25 Bgee:Q8NB25 CleanEx:HS_FAM184A
Genevestigator:Q8NB25 GermOnline:ENSG00000111879 Uniprot:Q8NB25
Length = 1140
Score = 118 (46.6 bits), Expect = 0.00061, P = 0.00061
Identities = 44/219 (20%), Positives = 103/219 (47%)
Query: 3 LSSISDDLAEINGQITDIFRALSNGFQKLEKIKDVNRQSRQLEELTDKMRECKRLIKEF- 61
+ + + + +N +++ + + K + + + Q +Q+ EL K+ E KR +E+
Sbjct: 400 IKDLESEKSRVNERLSQLEEERAFLRSKTQSLDE--EQKQQILELEKKVNEAKRTQQEYY 457
Query: 62 DREVKDIEGRNDPETNKMLSEKKQSMVKEL--NSYVALKKQHQTNLENNKRV--DLFDGP 117
+RE+K+++ R + E + L+E ++EL ++A++ H + + K++ DL +
Sbjct: 458 ERELKNLQSRLEEEVTQ-LNEAHSKTLEELAWKHHMAIEAVHSNAIRDKKKLQMDLEEQH 516
Query: 118 NE---GFAEDNVLLASSMTNQQLMDSGNRMMDETDQAIERSKQVVHETIN-VGTETAAVL 173
N+ ED L + N L + ++ +Q I + +V ++ +G+ +
Sbjct: 517 NKDKLNLEEDKNQLQQELEN--LKEVLEDKLNTANQEIGHLQDMVRKSEQGLGSAEGLIA 574
Query: 174 KAQTEQMSRIVNELDSIHFSIKKASQLVKEIGRQVATDK 212
Q Q R+ NELD S+K+ + + ++ ++
Sbjct: 575 SLQDSQ-ERLQNELDLTKDSLKETKDALLNVEGELEQER 612
>RGD|2323682 [details] [associations]
symbol:LOC100359512 "vesicle transport through interaction with
t-SNAREs 1B-like" species:10116 "Rattus norvegicus" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 RGD:1560475
RGD:2323682 GO:GO:0005794 GO:GO:0006886 GO:GO:0016020 GO:GO:0016192
SUPFAM:SSF47661 GeneTree:ENSGT00530000063466 IPI:IPI00948301
Ensembl:ENSRNOT00000015814 ArrayExpress:F1LNC4 Uniprot:F1LNC4
Length = 231
Score = 108 (43.1 bits), Expect = 0.00069, P = 0.00069
Identities = 51/206 (24%), Positives = 91/206 (44%)
Query: 23 ALSNGFQKLEKI-----KDVNRQSRQLEELTDKMRECKRLIKEFD---REVKDIEGRNDP 74
A S F+KL +I +D+ +L T E K+L+++FD +E + +
Sbjct: 6 ASSEHFEKLHEIFRGLLEDLQGVPERLLG-TAGTEEKKKLVRDFDEKQQEANETLAEMEE 64
Query: 75 ETNKMLSEKKQSMVKELNSYVALKKQHQ----TNLENNK--RVDLFDGPNEGFAEDNVLL 128
E + SM K N L K H+ T L R DL G + +N L
Sbjct: 65 ELRYAPLTFRNSMSKLRNYRKDLAKLHREVRSTPLTATPGGRGDLKFGT---YTLENEHL 121
Query: 129 ASSMTNQQLMDSGNRMMDETDQAIERSKQVVHETINVGTETAAVLKAQTEQMSRIVNELD 188
+ + L+ G ++ Q+IERS ++ ET +G+E L Q +Q+ R + L
Sbjct: 122 NRLQSQRALLLQGTESLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQLERTKSRLV 181
Query: 189 SIHFSIKKASQLVKEIGRQVATDKCI 214
+ + ++ K+ ++++ + R T+ I
Sbjct: 182 NTNENLSKSRKILRSMSRNNLTNTLI 207
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.129 0.344 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 261 250 0.00080 114 3 10 23 0.49 33
32 0.46 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 590 (63 KB)
Total size of DFA: 219 KB (2121 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 44.62u 0.10s 44.72t Elapsed: 00:00:02
Total cpu time: 44.62u 0.10s 44.72t Elapsed: 00:00:02
Start: Sat May 11 13:24:08 2013 End: Sat May 11 13:24:10 2013