Query 042999
Match_columns 1006
No_of_seqs 527 out of 3924
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 20:41:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042999.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042999hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 1.1E-29 3.9E-34 277.5 29.2 230 455-733 19-273 (284)
2 1dqv_A Synaptotagmin III; beta 100.0 1.1E-29 3.8E-34 278.6 17.2 217 454-719 19-249 (296)
3 2r83_A Synaptotagmin-1; C2A-C2 100.0 5.3E-27 1.8E-31 256.3 26.0 233 14-405 17-274 (284)
4 1dqv_A Synaptotagmin III; beta 99.9 8.5E-27 2.9E-31 255.6 16.1 236 14-406 18-278 (296)
5 2ep6_A MCTP2 protein; beta san 99.8 1.3E-20 4.6E-25 180.1 13.0 124 616-753 10-133 (133)
6 2fk9_A Protein kinase C, ETA t 99.8 1E-19 3.5E-24 176.6 14.2 120 616-751 26-156 (157)
7 3kwu_A MUNC13-1; calcium bindi 99.8 3.7E-19 1.3E-23 173.5 18.1 121 617-751 15-146 (148)
8 1wfj_A Putative elicitor-respo 99.8 1.8E-19 6.1E-24 173.1 13.2 123 616-753 7-131 (136)
9 2dmh_A Myoferlin; beta-sandwic 99.8 5.3E-19 1.8E-23 170.7 16.1 125 617-753 5-134 (140)
10 3b7y_A E3 ubiquitin-protein li 99.8 4.8E-19 1.7E-23 173.8 15.2 125 616-752 17-153 (153)
11 1wfj_A Putative elicitor-respo 99.8 7.9E-19 2.7E-23 168.6 15.2 125 13-149 7-132 (136)
12 3m7f_B E3 ubiquitin-protein li 99.8 1.5E-18 5.1E-23 174.4 16.0 126 616-753 5-142 (176)
13 2dmh_A Myoferlin; beta-sandwic 99.8 3.7E-18 1.3E-22 164.7 18.1 129 13-149 4-135 (140)
14 3b7y_A E3 ubiquitin-protein li 99.8 1.5E-18 5.1E-23 170.3 15.5 129 10-147 14-153 (153)
15 2ep6_A MCTP2 protein; beta san 99.8 1.3E-18 4.4E-23 166.3 13.4 123 13-147 10-132 (133)
16 3kwu_A MUNC13-1; calcium bindi 99.8 4.6E-18 1.6E-22 165.8 17.6 126 14-146 15-146 (148)
17 1gmi_A Protein kinase C, epsil 99.8 2E-18 6.8E-23 165.6 14.1 120 617-752 4-133 (136)
18 3m7f_B E3 ubiquitin-protein li 99.8 2.7E-18 9.2E-23 172.5 15.4 128 12-148 4-142 (176)
19 2fk9_A Protein kinase C, ETA t 99.8 2.1E-18 7E-23 167.5 13.9 116 14-146 27-156 (157)
20 1rlw_A Phospholipase A2, CALB 99.8 1.4E-18 4.7E-23 164.5 11.7 118 618-750 2-123 (126)
21 3pyc_A E3 ubiquitin-protein li 99.7 1.3E-17 4.3E-22 159.2 14.2 121 15-145 4-131 (132)
22 2nq3_A Itchy homolog E3 ubiqui 99.7 1.6E-17 5.5E-22 165.3 15.3 126 14-149 34-163 (173)
23 3pyc_A E3 ubiquitin-protein li 99.7 1.7E-17 5.8E-22 158.2 13.7 124 618-750 4-131 (132)
24 1gmi_A Protein kinase C, epsil 99.7 1.2E-17 4.2E-22 160.0 12.4 118 14-148 4-134 (136)
25 1rlw_A Phospholipase A2, CALB 99.7 1.5E-17 5.2E-22 157.2 12.3 117 15-146 2-124 (126)
26 2d8k_A Synaptotagmin VII; exoc 99.7 5.7E-17 2E-21 156.5 16.3 106 617-733 24-136 (141)
27 2nq3_A Itchy homolog E3 ubiqui 99.7 2.6E-17 8.9E-22 163.7 14.1 123 617-752 34-161 (173)
28 3fdw_A Synaptotagmin-like prot 99.7 1.4E-17 4.7E-22 162.3 10.0 123 578-735 7-137 (148)
29 1rsy_A Synaptotagmin I; calciu 99.7 5.4E-17 1.9E-21 158.8 13.8 105 617-732 40-150 (152)
30 2z0u_A WW domain-containing pr 99.7 3.7E-17 1.3E-21 159.6 11.7 104 617-731 41-154 (155)
31 2b3r_A Phosphatidylinositol-4- 99.7 6.5E-17 2.2E-21 154.4 12.8 104 617-732 18-130 (134)
32 3f04_A Synaptotagmin-1; C2A, c 99.7 5.9E-17 2E-21 156.8 12.7 105 617-732 32-142 (143)
33 2bwq_A Regulating synaptic mem 99.7 6.5E-17 2.2E-21 153.6 12.5 103 617-731 16-129 (129)
34 3fbk_A RGS3, RGP3, regulator o 99.7 9.2E-17 3.1E-21 157.3 12.3 106 617-734 25-139 (153)
35 3rdl_A Protein kinase C alpha 99.7 1.3E-16 4.5E-21 153.2 13.0 104 619-734 16-126 (137)
36 1v27_A Regulating synaptic mem 99.7 9.3E-17 3.2E-21 155.1 10.9 120 578-734 5-135 (141)
37 1ugk_A Synaptotagmin IV, KIAA1 99.7 2.5E-16 8.6E-21 151.4 13.8 106 617-733 20-134 (138)
38 1rh8_A Piccolo protein; beta-s 99.7 3.8E-17 1.3E-21 158.0 7.2 104 619-733 18-139 (142)
39 2b3r_A Phosphatidylinositol-4- 99.7 2.1E-16 7.3E-21 150.7 12.0 109 14-130 18-132 (134)
40 1tjx_A Similar to synaptotagmi 99.7 6.8E-16 2.3E-20 152.2 15.9 121 577-733 8-148 (159)
41 1wfm_A Synaptotagmin XIII; C2 99.7 5.7E-16 2E-20 148.6 14.7 102 617-732 24-132 (138)
42 2dmg_A KIAA1228 protein; beta- 99.7 2.1E-16 7.3E-21 152.7 11.6 121 577-733 7-136 (142)
43 2bwq_A Regulating synaptic mem 99.7 2E-16 6.7E-21 150.2 11.1 106 15-127 17-129 (129)
44 2enp_A B/K protein; C2 type 1, 99.7 2.3E-16 7.9E-21 153.4 11.6 123 578-733 10-142 (147)
45 2z0u_A WW domain-containing pr 99.7 5.6E-17 1.9E-21 158.4 7.1 107 15-127 42-154 (155)
46 2chd_A Rabphilin-3A, exophilin 99.7 3E-16 1E-20 151.6 12.2 104 617-731 27-139 (142)
47 3n5a_A Synaptotagmin-7; calciu 99.7 5.4E-16 1.8E-20 149.1 13.8 102 617-731 14-123 (138)
48 1a25_A CALB, protein kinase C 99.7 2.6E-16 8.8E-21 153.4 11.2 103 619-733 31-140 (149)
49 2q3x_A Regulating synaptic mem 99.7 1.6E-16 5.5E-21 158.5 9.9 106 619-734 30-141 (171)
50 2d8k_A Synaptotagmin VII; exoc 99.7 2.7E-16 9.2E-21 151.8 11.0 110 15-130 25-137 (141)
51 2cm5_A Rabphilin-3A; protein t 99.7 1E-15 3.4E-20 152.1 15.1 92 617-719 35-134 (166)
52 3fdw_A Synaptotagmin-like prot 99.6 3E-16 1E-20 152.7 9.8 111 15-132 22-138 (148)
53 1rsy_A Synaptotagmin I; calciu 99.6 6.9E-16 2.4E-20 150.9 11.8 107 15-128 41-150 (152)
54 3l9b_A Otoferlin; C2-domain, b 99.6 2.7E-15 9.4E-20 138.5 14.6 127 10-149 15-142 (144)
55 3f04_A Synaptotagmin-1; C2A, c 99.6 4.9E-16 1.7E-20 150.3 10.3 108 14-128 32-142 (143)
56 1ugk_A Synaptotagmin IV, KIAA1 99.6 1.3E-15 4.4E-20 146.4 13.0 111 14-130 20-135 (138)
57 2cjt_A UNC-13 homolog A, MUNC1 99.6 8.3E-16 2.8E-20 145.5 11.0 117 618-751 4-131 (131)
58 1v27_A Regulating synaptic mem 99.6 4.9E-16 1.7E-20 150.0 9.7 109 15-130 20-135 (141)
59 3rdl_A Protein kinase C alpha 99.6 1E-15 3.5E-20 146.9 11.8 106 15-129 15-125 (137)
60 3fbk_A RGS3, RGP3, regulator o 99.6 1.7E-15 5.9E-20 148.2 12.6 108 15-130 26-139 (153)
61 1a25_A CALB, protein kinase C 99.6 1.5E-15 5.1E-20 148.0 11.8 106 15-129 30-140 (149)
62 1w15_A Synaptotagmin IV; metal 99.6 2.8E-15 9.7E-20 146.8 13.8 103 617-732 28-138 (153)
63 1wfm_A Synaptotagmin XIII; C2 99.6 2.5E-15 8.5E-20 144.2 12.8 107 14-130 24-134 (138)
64 1rh8_A Piccolo protein; beta-s 99.6 2.8E-16 9.4E-21 152.0 5.9 109 15-130 17-140 (142)
65 2q3x_A Regulating synaptic mem 99.6 1.4E-15 4.8E-20 151.6 10.9 106 15-130 29-141 (171)
66 2cjs_A UNC-13 homolog A, MUNC1 99.6 1.2E-14 4.2E-19 143.2 16.5 120 617-753 12-142 (167)
67 2chd_A Rabphilin-3A, exophilin 99.6 1.8E-15 6.3E-20 146.1 10.1 108 14-128 27-140 (142)
68 3nsj_A Perforin-1; pore formin 99.6 1E-14 3.6E-19 169.2 17.4 126 616-769 391-518 (540)
69 2cm5_A Rabphilin-3A; protein t 99.6 6.7E-15 2.3E-19 146.2 12.9 93 15-113 36-133 (166)
70 1tjx_A Similar to synaptotagmi 99.6 7.2E-15 2.5E-19 144.9 12.5 109 15-129 24-148 (159)
71 3l9b_A Otoferlin; C2-domain, b 99.6 1.3E-14 4.5E-19 134.0 12.6 117 619-753 21-141 (144)
72 2dmg_A KIAA1228 protein; beta- 99.6 2.6E-15 8.8E-20 145.1 8.2 108 15-130 23-137 (142)
73 1w15_A Synaptotagmin IV; metal 99.6 1.3E-14 4.6E-19 141.9 13.1 92 15-112 29-125 (153)
74 3n5a_A Synaptotagmin-7; calciu 99.6 1E-14 3.5E-19 140.2 11.9 94 14-113 14-112 (138)
75 2enp_A B/K protein; C2 type 1, 99.6 3.1E-15 1E-19 145.4 8.0 109 15-130 25-143 (147)
76 3jzy_A Intersectin 2; C2 domai 99.5 1.9E-14 6.5E-19 170.4 13.7 119 616-751 384-507 (510)
77 2cjt_A UNC-13 homolog A, MUNC1 99.5 4.7E-14 1.6E-18 133.4 12.3 99 14-127 3-103 (131)
78 3jzy_A Intersectin 2; C2 domai 99.5 6.1E-14 2.1E-18 166.1 14.5 122 12-146 383-507 (510)
79 2cjs_A UNC-13 homolog A, MUNC1 99.5 1.5E-13 5E-18 135.4 14.0 122 12-148 10-142 (167)
80 3nsj_A Perforin-1; pore formin 99.5 2E-13 7E-18 158.4 15.8 113 15-148 393-505 (540)
81 1djx_A PLC-D1, phosphoinositid 99.5 6E-13 2E-17 158.3 18.9 124 11-146 492-623 (624)
82 1djx_A PLC-D1, phosphoinositid 99.5 2.9E-13 9.8E-18 161.1 15.8 122 617-751 495-623 (624)
83 3bxj_A RAS GTPase-activating p 99.4 8.6E-15 3E-19 170.0 0.3 124 617-756 9-161 (483)
84 1cjy_A CPLA2, protein (cytosol 99.4 5E-13 1.7E-17 159.7 8.8 104 616-731 15-125 (749)
85 1cjy_A CPLA2, protein (cytosol 99.3 9.3E-13 3.2E-17 157.4 9.1 116 4-129 6-127 (749)
86 3bxj_A RAS GTPase-activating p 99.2 6.8E-13 2.3E-17 154.1 -0.7 122 13-149 8-159 (483)
87 3pfq_A PKC-B, PKC-beta, protei 99.1 1.2E-10 4.2E-15 141.7 9.0 104 618-733 171-281 (674)
88 3qr0_A Phospholipase C-beta (P 99.1 6.1E-10 2.1E-14 134.6 14.2 112 618-752 649-771 (816)
89 3pfq_A PKC-B, PKC-beta, protei 99.0 2.9E-10 1E-14 138.4 10.6 106 15-129 171-281 (674)
90 3ohm_B 1-phosphatidylinositol- 99.0 1.3E-09 4.5E-14 132.3 15.5 116 14-149 723-847 (885)
91 3qr0_A Phospholipase C-beta (P 99.0 2.1E-09 7.3E-14 129.9 17.1 117 13-149 647-773 (816)
92 2zkm_X 1-phosphatidylinositol- 99.0 1.1E-09 3.7E-14 133.5 13.0 113 616-751 675-798 (799)
93 2zkm_X 1-phosphatidylinositol- 99.0 3.7E-09 1.3E-13 128.8 16.4 115 12-146 674-798 (799)
94 3ohm_B 1-phosphatidylinositol- 98.9 3.4E-09 1.2E-13 128.8 13.7 112 455-590 725-844 (885)
95 1yrk_A NPKC-delta, protein kin 98.8 4.5E-08 1.5E-12 87.6 12.3 108 16-146 6-124 (126)
96 2enj_A NPKC-theta, protein kin 98.7 6.8E-08 2.3E-12 87.5 11.2 114 15-149 9-132 (138)
97 1yrk_A NPKC-delta, protein kin 98.7 2E-07 6.9E-12 83.4 13.2 107 619-751 6-124 (126)
98 2enj_A NPKC-theta, protein kin 98.6 2.1E-07 7.3E-12 84.3 10.8 109 618-751 9-129 (138)
99 3l4c_A Dedicator of cytokinesi 84.6 11 0.00038 37.4 12.7 79 11-91 22-119 (220)
100 3hhm_A Phosphatidylinositol-4, 78.8 5.7 0.0002 49.2 10.0 93 456-552 356-456 (1091)
101 2yrb_A Protein fantom; beta sa 76.9 8.9 0.0003 35.9 8.5 126 615-753 14-151 (156)
102 2yrb_A Protein fantom; beta sa 75.4 6.4 0.00022 36.9 7.1 129 13-149 15-152 (156)
103 2wxf_A Phosphatidylinositol-4, 75.3 8.3 0.00028 47.5 10.1 87 456-551 218-324 (940)
104 2wxf_A Phosphatidylinositol-4, 72.5 14 0.00049 45.4 11.2 74 14-90 215-294 (940)
105 3hhm_A Phosphatidylinositol-4, 68.3 21 0.00073 44.3 11.4 95 15-112 354-454 (1091)
106 2y3a_A Phosphatidylinositol-4, 63.6 9.3 0.00032 47.7 7.0 73 15-90 352-430 (1092)
107 1e7u_A Phosphatidylinositol 3- 61.5 19 0.00064 44.4 9.1 91 457-551 220-330 (961)
108 1e7u_A Phosphatidylinositol 3- 61.1 25 0.00084 43.4 10.1 74 16-90 218-296 (961)
109 3l4c_A Dedicator of cytokinesi 52.7 42 0.0014 33.3 8.3 59 655-716 77-138 (220)
110 2y3a_A Phosphatidylinositol-4, 51.6 14 0.00046 46.2 5.6 94 618-718 352-470 (1092)
111 3hd7_A Vesicle-associated memb 30.2 1.1E+02 0.0036 25.7 6.2 39 935-973 34-72 (91)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.97 E-value=1.1e-29 Score=277.53 Aligned_cols=230 Identities=22% Similarity=0.241 Sum_probs=186.6
Q ss_pred EEEEEEEEEeecCcccCCCCCCCCCCcEEEEEECC---ccceeeeeecCCCCCCceecceeeeeeccC--CCCcEEEEEE
Q 042999 455 WYLRVTVMEAQDLCIAHNLPPLTAPEIRVKAQLAL---QSARTRRGSMNNHSSSFHWHEDVFFVAAEP--FEDSLILLVE 529 (1006)
Q Consensus 455 ~~L~V~v~~a~~L~~~~~~d~~~~~dpyv~v~lg~---~~~kT~~~~~~~~t~nP~w~e~~~f~v~~~--~~~~L~v~V~ 529 (1006)
..|+|+|++|+||+.+ |.++.+||||++.+++ +.++|++++ +++||.|||.|.|.+... ....|.|.||
T Consensus 19 ~~L~v~v~~a~~L~~~---d~~~~~dpyv~v~~~~~~~~~~~T~~~~---~~~nP~wne~f~f~v~~~~~~~~~l~~~V~ 92 (284)
T 2r83_A 19 NQLLVGIIQAAELPAL---DMGGTSDPYVKVFLLPDKKKKFETKVHR---KTLNPVFNEQFTFKVPYSELAGKTLVMAVY 92 (284)
T ss_dssp TEEEEEEEEEECCCCC---SSSSSCCEEEEEEEETCTTSCEECCCCC---SCSSCEEEEEEEECCCGGGCTTCEEEEEEE
T ss_pred CEEEEEEEEeeCCCCC---CCCCCCCeEEEEEEEcCCCceEeCCccc---CCCCCeeCceEEEEechHHhCcCEEEEEEE
Confidence 4699999999999977 6788999999999963 567788764 899999999999987654 3468999999
Q ss_pred ECCCCccccceeEEEEEeccccccccccCcccceEEeCcCCCCCCCccceeeeEEEEEeeeCCccccccccccCCCCCcc
Q 042999 530 DRTAKDAAAVILGHAVVPVSSIDQRIDERHVASKWFPLEGSCGRGCARSYCGRIQLKLCLEGGYHVLDEAAHVCSDFRPT 609 (1006)
Q Consensus 530 D~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~~~~~~~~~~~~~G~l~l~v~l~~~~~~~d~~~~~~~~~~p~ 609 (1006)
|.+..+ ++++||++.++|.++... .....|++|....+. .....|.|.+.+.+.
T Consensus 93 d~d~~~-~~~~lG~~~i~l~~l~~~----~~~~~w~~L~~~~~~--~~~~~G~i~l~l~~~------------------- 146 (284)
T 2r83_A 93 DFDRFS-KHDIIGEFKVPMNTVDFG----HVTEEWRDLQSAEKE--EQEKLGDICFSLRYV------------------- 146 (284)
T ss_dssp ECCSSS-CCCEEEEEEEEGGGCCCS----SCEEEEEECBCCSSC--CCCCCCEEEEEEEEE-------------------
T ss_pred ECCCCC-CCceeEEEEEcchhcccC----CcceeEEEeeccccc--cccccccEEEEEEec-------------------
Confidence 999754 589999999999998753 346789999875431 223468888776432
Q ss_pred ccccCCCCcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEEC--C---EEEEeecccCCCCCeeccEEEEEEeCC---
Q 042999 610 AKQLWKPPVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYG--K---KWVRTRTITDCFDPRWNEQYTWQVYDP--- 681 (1006)
Q Consensus 610 ~~~l~~~~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~--~---~~~rT~~~~~~~nP~wne~~~~~v~~~--- 681 (1006)
+..|.|.|.|++|+||+++| . +|.+||||++.+. + ...||+++++++||.|||.|.|.+...
T Consensus 147 ------p~~~~l~v~v~~a~~L~~~d---~-~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~ 216 (284)
T 2r83_A 147 ------PTAGKLTVVILEAKNLKKMD---V-GGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQ 216 (284)
T ss_dssp ------TTTTEEEEEEEEEESCCCCS---T-TSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGG
T ss_pred ------CcCCceEEEEEEeECCCCcC---C-CCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhC
Confidence 13478999999999999865 4 7889999999984 2 467999999999999999999998754
Q ss_pred CcEEEEEEEECCCCCcCCCCCCCCceeEEEEEEcccc------------cCCceEeeEEEeeee
Q 042999 682 CTVLTVGVFDNWRMFADASEERPDYRIGKIRIRVSTL------------ENNKVYTTSYPLLVL 733 (1006)
Q Consensus 682 ~~~l~i~v~d~~~~~~~~~~~~~d~~lG~~~i~l~~l------------~~~~~~~~~~~L~~~ 733 (1006)
...|.|+|||+|.++ +|++||.+.|+++.+ ..+.....||+|...
T Consensus 217 ~~~l~i~V~d~d~~~-------~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 217 KVQVVVTVLDYDKIG-------KNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp GEEEEEEEEECCSSS-------CCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred ceEEEEEEEeCCCCC-------CCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 347999999999987 899999999999863 234566899999764
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.96 E-value=1.1e-29 Score=278.58 Aligned_cols=217 Identities=20% Similarity=0.223 Sum_probs=175.9
Q ss_pred eEEEEEEEEEeecCcccCCCCCCCCCCcEEEEEE---CCccceeeeeecCCCCCCceecceeeeeeccCC--CCcEEEEE
Q 042999 454 LWYLRVTVMEAQDLCIAHNLPPLTAPEIRVKAQL---ALQSARTRRGSMNNHSSSFHWHEDVFFVAAEPF--EDSLILLV 528 (1006)
Q Consensus 454 ~~~L~V~v~~a~~L~~~~~~d~~~~~dpyv~v~l---g~~~~kT~~~~~~~~t~nP~w~e~~~f~v~~~~--~~~L~v~V 528 (1006)
...|+|+|++|+||+.+ |.++.+||||++.+ +.++++|++++ +++||.|||.|.|.+.... ...|.|.|
T Consensus 19 ~~~L~v~v~~a~~L~~~---d~~g~~dPyv~v~l~~~~~~~~kT~v~~---~t~nP~wne~f~f~v~~~~l~~~~L~~~V 92 (296)
T 1dqv_A 19 SDQLVVRILQALDLPAK---DSNGFSDPYVKIYLLPDRKKKFQTKVHR---KTLNPIFNETFQFSVPLAELAQRKLHFSV 92 (296)
T ss_dssp SCEEEEEEEEEECCCCC---STTSCCCEEEEEECTTSTTSCEECCCCC---SCSSCEEEEEEEEECCGGGGSSCCCEEEE
T ss_pred CCEEEEEEEEeECCCCc---CCCCCcCeEEEEEEEcCCCeeEeCCccC---CCCCCcEeeEEEEEecHHHhcCCEEEEEE
Confidence 35699999999999977 67889999999999 56788899765 8999999999999986443 45899999
Q ss_pred EECCCCccccceeEEEEEe-ccccccccccCcccceEEeCcCCCCCCCccceeeeEEEEEeeeCCccccccccccCCCCC
Q 042999 529 EDRTAKDAAAVILGHAVVP-VSSIDQRIDERHVASKWFPLEGSCGRGCARSYCGRIQLKLCLEGGYHVLDEAAHVCSDFR 607 (1006)
Q Consensus 529 ~D~~~~~~~d~~lG~~~i~-l~~l~~~~~~~~~~~~w~~L~~~~~~~~~~~~~G~l~l~v~l~~~~~~~d~~~~~~~~~~ 607 (1006)
||+|..+ ++++||++.++ +.++... ......|+.|....+ .....|.|.+.+...
T Consensus 93 ~d~d~~~-~~~~iG~~~i~~l~~~~~~---~~~~~~w~~L~~~~~---~~~~~G~i~vsl~y~----------------- 148 (296)
T 1dqv_A 93 YDFDRFS-RHDLIGQVVLDNLLELAEQ---PPDRPLWRDILEGGS---EKADLGELNFSLCYL----------------- 148 (296)
T ss_dssp EECCSSS-CCCEEEEEECCCTTGGGSS---CSSCCCCEECBCCSS---CCSCCCEEEEEEEEE-----------------
T ss_pred EEcCCCC-CCceEEEEEeccccccccC---Cccceeeeccccccc---cccccceEEEEEEec-----------------
Confidence 9999754 58999999996 5444421 123467999986543 233468888776432
Q ss_pred ccccccCCCCcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEEC--C---EEEEeecccCCCCCeeccEEEEEEeCC-
Q 042999 608 PTAKQLWKPPVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYG--K---KWVRTRTITDCFDPRWNEQYTWQVYDP- 681 (1006)
Q Consensus 608 p~~~~l~~~~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~--~---~~~rT~~~~~~~nP~wne~~~~~v~~~- 681 (1006)
+..|.|.|.|++|+||+++| . .|.+||||++.++ + ...||+++++++||+|||.|.|.+...
T Consensus 149 --------~~~~~l~v~v~~a~~L~~~d---~-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 216 (296)
T 1dqv_A 149 --------PTAGLLTVTIIKASNLKAMD---L-TGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPES 216 (296)
T ss_dssp --------TTTTEEEEEEEEEESCCCCS---S-SSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGG
T ss_pred --------cccceeEEEEEEeecCCccC---C-CCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHH
Confidence 13579999999999998865 4 7889999999995 2 578999999999999999999998754
Q ss_pred --CcEEEEEEEECCCCCcCCCCCCCCceeEEEEEEccccc
Q 042999 682 --CTVLTVGVFDNWRMFADASEERPDYRIGKIRIRVSTLE 719 (1006)
Q Consensus 682 --~~~l~i~v~d~~~~~~~~~~~~~d~~lG~~~i~l~~l~ 719 (1006)
...|.|+|||+|.++ +|++||.+.|++..+.
T Consensus 217 l~~~~L~i~V~d~d~~~-------~~~~iG~~~i~l~~~~ 249 (296)
T 1dqv_A 217 VENVGLSIAVVDYDCIG-------HNEVIGVCRVGPEAAD 249 (296)
T ss_dssp GGSCCCCCEEEECCSSS-------CCEEEEECCCSSCTTC
T ss_pred ccCcEEEEEEEeCCCCC-------CCceEEEEEECCccCC
Confidence 347999999999987 8999999999998764
No 3
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.95 E-value=5.3e-27 Score=256.34 Aligned_cols=233 Identities=24% Similarity=0.318 Sum_probs=181.6
Q ss_pred cccEEEEEEEEecCCCCCCCCCCCCcEEEEEEC---CeEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeCC
Q 042999 14 TVRKLVVEVVDARDLLPKDGQGSSSPYVIADFD---GQRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYNDK 90 (1006)
Q Consensus 14 ~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~---~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~d 90 (1006)
..+.|.|+|++|++|+.++..|.+||||+++++ .++++|+++++++||+|||+|.|.+...+ .....|.|+|||++
T Consensus 17 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~-~~~~~l~~~V~d~d 95 (284)
T 2r83_A 17 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSE-LAGKTLVMAVYDFD 95 (284)
T ss_dssp TTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGG-CTTCEEEEEEEECC
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHH-hCcCEEEEEEEECC
Confidence 357899999999999999989999999999995 35789999999999999999999986532 22578999999999
Q ss_pred CCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceecCC-ceeeeEEEEEEEEEEecCcccccCCCCCCCCCCCCCCC
Q 042999 91 RYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKKSV-FSWIRGEIGLRIYYYDELSEEEHQHPPPPQDEPPPPQP 169 (1006)
Q Consensus 91 ~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~~-~~~~~G~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (1006)
.+ +++++||++.+++.++ ..+.....|++|..... .....|+|.+.+.|.+..
T Consensus 96 ~~-----~~~~~lG~~~i~l~~l-~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~~-------------------- 149 (284)
T 2r83_A 96 RF-----SKHDIIGEFKVPMNTV-DFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTA-------------------- 149 (284)
T ss_dssp SS-----SCCCEEEEEEEEGGGC-CCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEETTT--------------------
T ss_pred CC-----CCCceeEEEEEcchhc-ccCCcceeEEEeeccccccccccccEEEEEEecCcC--------------------
Confidence 98 7899999999999996 44556678999986432 223467777776654221
Q ss_pred CCCCCCcccccCCcccccCCCCccccCCCCccccCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhc
Q 042999 170 PQQQPGVCVVEEGRVFEVPGGHVEVCHPVPEIYHGQPPPQAPIIEESQPHGVHVQPEPVQIPPHDEPIPTAVPAAEIRKM 249 (1006)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 249 (1006)
T Consensus 150 -------------------------------------------------------------------------------- 149 (284)
T 2r83_A 150 -------------------------------------------------------------------------------- 149 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccccCCCCCCCCccccCCCCCCCCCCCCCCCcccccccceEEEEEEEeeCCCC-----CCCcEEEEEECC--
Q 042999 250 QSGCAERVNVLKRPNGDYSPKVINSSKPNGEVPTERIHPYDLVEPMMYLFVKIRKARGLVP-----NEAPYVKIRTSS-- 322 (1006)
Q Consensus 250 ~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~l~V~v~~a~~l~~-----~~dpyv~v~~~~-- 322 (1006)
..|.|.+++|++|+. .+||||++++..
T Consensus 150 ----------------------------------------------~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~ 183 (284)
T 2r83_A 150 ----------------------------------------------GKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNG 183 (284)
T ss_dssp ----------------------------------------------TEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETT
T ss_pred ----------------------------------------------CceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCC
Confidence 015588999999974 569999999852
Q ss_pred ---eeeeeeEeeccCCCCCCCCeeceEEEEeccCCCCCCCEEEEEEEcCC---CCCccEEEEEeCCcCCCC--------C
Q 042999 323 ---HYKKSKLASYRACDPHDSPEWNQVFALFHNKNDSVSATLEITVWDSP---TENFLGGVCFDLSDVPVR--------D 388 (1006)
Q Consensus 323 ---~~~~T~~~~~~~~~~~~nP~wne~f~f~~~~~~~~~~~l~i~V~D~~---~d~~lG~~~i~l~~l~~~--------~ 388 (1006)
..++|+++ +++.||+|||.|.|.+.........|.|+|||++ ++++||.+.+++..+... .
T Consensus 184 ~~~~~~kT~v~-----~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~ 258 (284)
T 2r83_A 184 KRLKKKKTTIK-----KNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLA 258 (284)
T ss_dssp EEEEEEECCCC-----CSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHH
T ss_pred cEeeeecccee-----cCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHH
Confidence 45788888 9999999999999987654211468999999987 489999999999763210 0
Q ss_pred CCCCCCcceeEEcccCC
Q 042999 389 PPDSPLAPQWYRLEGEA 405 (1006)
Q Consensus 389 ~~~~~~~~~w~~L~~~~ 405 (1006)
.+. ....+||+|....
T Consensus 259 ~~~-~~~~~W~~L~~~~ 274 (284)
T 2r83_A 259 NPR-RPIAQWHTLQVEE 274 (284)
T ss_dssp STT-SCEEEEEECBCHH
T ss_pred CCC-CchheeeecCCcc
Confidence 012 2345899998654
No 4
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.94 E-value=8.5e-27 Score=255.59 Aligned_cols=236 Identities=22% Similarity=0.318 Sum_probs=180.2
Q ss_pred cccEEEEEEEEecCCCCCCCCCCCCcEEEEEE---CCeEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeCC
Q 042999 14 TVRKLVVEVVDARDLLPKDGQGSSSPYVIADF---DGQRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYNDK 90 (1006)
Q Consensus 14 ~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~---~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~d 90 (1006)
..+.|.|+|++|++|+.+|..|.+||||++++ +.++++|+++++++||+|||+|.|.+...+ +....|.|+|||+|
T Consensus 18 ~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-l~~~~L~~~V~d~d 96 (296)
T 1dqv_A 18 GSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAE-LAQRKLHFSVYDFD 96 (296)
T ss_dssp SSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGG-GSSCCCEEEEEECC
T ss_pred CCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHH-hcCCEEEEEEEEcC
Confidence 35789999999999999999999999999999 467899999999999999999999986532 22458999999999
Q ss_pred CCCCCCCCCCceeEEEEEe-CeeeeeeCCceeEEEEceecCCceeeeEEEEEEEEEEecCcccccCCCCCCCCCCCCCCC
Q 042999 91 RYCNGSGRKNHFLGRVKLC-GSQFARRGDEGLVYFPLEKKSVFSWIRGEIGLRIYYYDELSEEEHQHPPPPQDEPPPPQP 169 (1006)
Q Consensus 91 ~~~~~~~~~d~~lG~~~v~-l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (1006)
.+ +++++||++.++ +.++...+.....|++|..........|+|.+.+.|.+...
T Consensus 97 ~~-----~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~~~~------------------- 152 (296)
T 1dqv_A 97 RF-----SRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYLPTAG------------------- 152 (296)
T ss_dssp SS-----SCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEETTTT-------------------
T ss_pred CC-----CCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEeccccc-------------------
Confidence 98 789999999995 44433333444579999765433445688888777643210
Q ss_pred CCCCCCcccccCCcccccCCCCccccCCCCccccCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhc
Q 042999 170 PQQQPGVCVVEEGRVFEVPGGHVEVCHPVPEIYHGQPPPQAPIIEESQPHGVHVQPEPVQIPPHDEPIPTAVPAAEIRKM 249 (1006)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 249 (1006)
T Consensus 153 -------------------------------------------------------------------------------- 152 (296)
T 1dqv_A 153 -------------------------------------------------------------------------------- 152 (296)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccccCCCCCCCCccccCCCCCCCCCCCCCCCcccccccceEEEEEEEeeCCCC-----CCCcEEEEEEC--C
Q 042999 250 QSGCAERVNVLKRPNGDYSPKVINSSKPNGEVPTERIHPYDLVEPMMYLFVKIRKARGLVP-----NEAPYVKIRTS--S 322 (1006)
Q Consensus 250 ~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~l~V~v~~a~~l~~-----~~dpyv~v~~~--~ 322 (1006)
.|.|.|++|++|+. .+||||+++++ +
T Consensus 153 -----------------------------------------------~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~ 185 (296)
T 1dqv_A 153 -----------------------------------------------LLTVTIIKASNLKAMDLTGFSDPYVKASLISEG 185 (296)
T ss_dssp -----------------------------------------------EEEEEEEEEESCCCCSSSSCCCEEEEECCCTTC
T ss_pred -----------------------------------------------eeEEEEEEeecCCccCCCCCCCcEEEEEEEeCC
Confidence 15588899999864 46999999996 3
Q ss_pred ---eeeeeeEeeccCCCCCCCCeeceEEEEeccCCCCCCCEEEEEEEcCC---CCCccEEEEEeCCcCCC-C-------C
Q 042999 323 ---HYKKSKLASYRACDPHDSPEWNQVFALFHNKNDSVSATLEITVWDSP---TENFLGGVCFDLSDVPV-R-------D 388 (1006)
Q Consensus 323 ---~~~~T~~~~~~~~~~~~nP~wne~f~f~~~~~~~~~~~l~i~V~D~~---~d~~lG~~~i~l~~l~~-~-------~ 388 (1006)
.+++|+++ +++.||+|||.|.|.+.........|.|+|||++ ++++||.+.+++..+.. . -
T Consensus 186 ~~~~~~kT~v~-----~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~ 260 (296)
T 1dqv_A 186 RRLKKRKTSIK-----KNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEML 260 (296)
T ss_dssp CTTSCEECCCC-----CSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSS
T ss_pred cCccceeccee-----cCCCCCeECceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCchhHHHHHHHH
Confidence 56789999 9999999999999987654211468999999987 48999999999986532 0 0
Q ss_pred CCCCCCcceeEEcccCCC
Q 042999 389 PPDSPLAPQWYRLEGEAS 406 (1006)
Q Consensus 389 ~~~~~~~~~w~~L~~~~~ 406 (1006)
........+|+.|....+
T Consensus 261 ~~~~~~~~~w~~L~~~~~ 278 (296)
T 1dqv_A 261 ANPRKPVEHWHQLVEEKT 278 (296)
T ss_dssp SSSSSCSCSCCCCBBCC-
T ss_pred hCCCCceeEeeeccCccc
Confidence 001123457888877653
No 5
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.83 E-value=1.3e-20 Score=180.10 Aligned_cols=124 Identities=27% Similarity=0.450 Sum_probs=110.7
Q ss_pred CCcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECCEEEEeecccCCCCCeeccEEEEEEeCCCcEEEEEEEECCCC
Q 042999 616 PPVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGKKWVRTRTITDCFDPRWNEQYTWQVYDPCTVLTVGVFDNWRM 695 (1006)
Q Consensus 616 ~~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~~~~rT~~~~~~~nP~wne~~~~~v~~~~~~l~i~v~d~~~~ 695 (1006)
+..|.|+|+|++|+||++++ . .|++||||++.++++.+||+++++++||.|||+|.|++.++...|.|+|||+|.+
T Consensus 10 ~~~~~L~v~v~~a~~L~~~d---~-~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~ 85 (133)
T 2ep6_A 10 KDVGILQVKVLKAADLLAAD---F-SGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGD 85 (133)
T ss_dssp CCSEEEEEEEEEEESCCCSS---S-SSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETT
T ss_pred CCceEEEEEEEeeECCCCCC---C-CCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCC
Confidence 57899999999999999864 4 7899999999999999999999999999999999999998888999999999988
Q ss_pred CcCCCCCCCCceeEEEEEEcccccCCceEeeEEEeeeeccCCcccccEEEEEEEEecC
Q 042999 696 FADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLLVLLRTGLKKMGEIELAVRFVCP 753 (1006)
Q Consensus 696 ~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~~~~~ 753 (1006)
+ +|++||.+.|+|.++..+. ..||+|......+ ...|+|+|+++|.++
T Consensus 86 ~-------~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~-~~~G~i~l~i~~~~N 133 (133)
T 2ep6_A 86 K-------PPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQ-AFKGVIYLEMDLIYN 133 (133)
T ss_dssp E-------EEEECCBCEEEGGGCCSSC--CEECCCBCSCTTS-CCSSEEEEEEEEEEC
T ss_pred C-------CCCeeEEEEEEHHHccCCC--ceEEEeecCCCCC-ccceEEEEEEEEEeC
Confidence 6 7999999999999998776 6899998755433 345999999999753
No 6
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.81 E-value=1e-19 Score=176.64 Aligned_cols=120 Identities=20% Similarity=0.201 Sum_probs=102.6
Q ss_pred CCcEEEEEEEeeccCCccCccCC----C--CCCCCCeEEEEEECCEE-EEeecccCCCCCeeccEEEEEEeCCCcEEEEE
Q 042999 616 PPVGILELGILGARGLLPMKTKN----G--GKGSTDAYCVAKYGKKW-VRTRTITDCFDPRWNEQYTWQVYDPCTVLTVG 688 (1006)
Q Consensus 616 ~~~g~L~v~v~~a~~L~~~~~~d----~--~~g~sdpyv~v~~~~~~-~rT~~~~~~~nP~wne~~~~~v~~~~~~l~i~ 688 (1006)
...|.|+|+|++|++|+++|... . +.|.+||||++.++++. .||+++++|+||+|||+|.|.+.+. ..|.|+
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~~-~~L~~~ 104 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTDG-GHLELA 104 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCCC-CEEEEE
Confidence 46899999999999999876210 0 13679999999999876 5999999999999999999998764 589999
Q ss_pred EEECCCCCcCCCCCCCCceeEEEEEEcccccCC----ceEeeEEEeeeeccCCcccccEEEEEEEEe
Q 042999 689 VFDNWRMFADASEERPDYRIGKIRIRVSTLENN----KVYTTSYPLLVLLRTGLKKMGEIELAVRFV 751 (1006)
Q Consensus 689 v~d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~----~~~~~~~~L~~~~~~g~~~~G~l~l~~~~~ 751 (1006)
|||+|.++ +|++||++.|+|.++..+ ...+.||+|.. .|+|+|+++|.
T Consensus 105 V~D~d~~~-------~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--------~G~i~l~l~~~ 156 (157)
T 2fk9_A 105 VFHETPLG-------YDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--------EGKVFVVITLT 156 (157)
T ss_dssp EEECCSSS-------SCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--------SCEEEEEEEEC
T ss_pred EEECCCCC-------CCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--------CcEEEEEEEEE
Confidence 99999987 899999999999999754 67799999942 49999999985
No 7
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.81 E-value=3.7e-19 Score=173.54 Aligned_cols=121 Identities=25% Similarity=0.339 Sum_probs=106.2
Q ss_pred CcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECCEEEEeecccCCCCCeeccEEEEEEeCCCcEEEEEEEECCCC-
Q 042999 617 PVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGKKWVRTRTITDCFDPRWNEQYTWQVYDPCTVLTVGVFDNWRM- 695 (1006)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~~~~rT~~~~~~~nP~wne~~~~~v~~~~~~l~i~v~d~~~~- 695 (1006)
..|.|+|+|++|+||+++| . +|++||||++.++++..||+++++++||.|||+|.|.+.++...|.|+|||+|..
T Consensus 15 ~~~~L~V~v~~a~~L~~~d---~-~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~ 90 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKD---K-TGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDI 90 (148)
T ss_dssp CCEEEEEEEEEEESCCCCS---T-TSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSH
T ss_pred cccEEEEEEEeeeCCCCCC---C-CCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCc
Confidence 3699999999999999865 4 7899999999999999999999999999999999999998889999999999975
Q ss_pred ----------CcCCCCCCCCceeEEEEEEcccccCCceEeeEEEeeeeccCCcccccEEEEEEEEe
Q 042999 696 ----------FADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLLVLLRTGLKKMGEIELAVRFV 751 (1006)
Q Consensus 696 ----------~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~~~ 751 (1006)
+ +|++||.+.|+|.++. .....||+|......+ ...|+|+|++.|+
T Consensus 91 ~~~~~~~~~~~-------~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~~~~-~~~G~i~l~l~~e 146 (148)
T 3kwu_A 91 KSRVKQRFKRE-------SDDFLGQTIIEVRTLS--GEMDVWYNLDKRTDKS-AVSGAIRLHISVE 146 (148)
T ss_dssp HHHHHTTTSSC-------SSEEEEEEEEEGGGCC--SEEEEEEECBCSSTTC-CCCCEEEEEEEEE
T ss_pred cccccccccCC-------CCccEEEEEEEHHHCc--CCCCEEEEcccCCCCC-CCceEEEEEEEEE
Confidence 4 7999999999999994 3448999997643333 2459999999986
No 8
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.80 E-value=1.8e-19 Score=173.11 Aligned_cols=123 Identities=23% Similarity=0.319 Sum_probs=108.7
Q ss_pred CCcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECCEEEEeeccc-CCCCCeeccEEEEEEeCCCcEEEEEEEECCC
Q 042999 616 PPVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGKKWVRTRTIT-DCFDPRWNEQYTWQVYDPCTVLTVGVFDNWR 694 (1006)
Q Consensus 616 ~~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~~~~rT~~~~-~~~nP~wne~~~~~v~~~~~~l~i~v~d~~~ 694 (1006)
...|.|+|+|++|++|++++ . .|++||||++.++++.+||++++ +++||.|||+|.|.+.+....|.|+|||+|.
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d---~-~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~ 82 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDAD---F-LNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDV 82 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCC---S-SCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSS
T ss_pred CCcEEEEEEEEeccCCCCcc---c-CCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCC
Confidence 36899999999999999864 4 78999999999999999999998 8999999999999999888899999999998
Q ss_pred CCcCCCCCCCCceeEEEEEEcccc-cCCceEeeEEEeeeeccCCcccccEEEEEEEEecC
Q 042999 695 MFADASEERPDYRIGKIRIRVSTL-ENNKVYTTSYPLLVLLRTGLKKMGEIELAVRFVCP 753 (1006)
Q Consensus 695 ~~~~~~~~~~d~~lG~~~i~l~~l-~~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~~~~~ 753 (1006)
++ +|++||.+.|+|.++ ..+.....||+|. . .+ +..|+|+|++.|.+.
T Consensus 83 ~~-------~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~--~~-~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 83 GT-------EDDAVGEATIPLEPVFVEGSIPPTAYNVV-K--DE-EYKGEIWVALSFKPS 131 (136)
T ss_dssp CT-------TTCCSEEEEEESHHHHHHSEEEEEEEEEE-E--TT-EEEEEEEEEEEEEEC
T ss_pred CC-------CCceEEEEEEEHHHhccCCCCCcEEEEee-c--CC-ccCEEEEEEEEEEeC
Confidence 87 899999999999999 5566668999997 2 22 345999999999875
No 9
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=5.3e-19 Score=170.68 Aligned_cols=125 Identities=19% Similarity=0.302 Sum_probs=106.8
Q ss_pred CcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECCEEEEeecccCCCCCeeccEEEEEEeC----CCcEEEEEEEEC
Q 042999 617 PVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGKKWVRTRTITDCFDPRWNEQYTWQVYD----PCTVLTVGVFDN 692 (1006)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~~~~rT~~~~~~~nP~wne~~~~~v~~----~~~~l~i~v~d~ 692 (1006)
..|.|.|+|++|++|++++ .|++||||+++++++..||+++++++||+|||+|.|.+.. ....|.|+|||+
T Consensus 5 ~~g~L~v~v~~a~~L~~~~-----~g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~ 79 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTK-----FGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDF 79 (140)
T ss_dssp BCCEEEEEEEEEESCCCCS-----SSCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEET
T ss_pred CCcEEEEEEEEeeCCCCCC-----CCCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEEC
Confidence 4689999999999998865 3689999999999999999999999999999999999975 357999999999
Q ss_pred CCCCcCCCCCCCCceeEEEEEEcccccCCceEeeEEEeeee-ccCCcccccEEEEEEEEecC
Q 042999 693 WRMFADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLLVL-LRTGLKKMGEIELAVRFVCP 753 (1006)
Q Consensus 693 ~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~-~~~g~~~~G~l~l~~~~~~~ 753 (1006)
|.++ +|++||.+.|+|.++..+...+.||+|... ...+....|+|+|+++|.+.
T Consensus 80 d~~~-------~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 80 ETIG-------QNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp TCSS-------SCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCC
T ss_pred CCCC-------CCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECC
Confidence 9987 799999999999999888877899983322 22333345999999999863
No 10
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.80 E-value=4.8e-19 Score=173.78 Aligned_cols=125 Identities=21% Similarity=0.338 Sum_probs=102.5
Q ss_pred CCcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECC------EEEEeecccCCCCCeeccEEEEEEeCCCcEEEEEE
Q 042999 616 PPVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGK------KWVRTRTITDCFDPRWNEQYTWQVYDPCTVLTVGV 689 (1006)
Q Consensus 616 ~~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~------~~~rT~~~~~~~nP~wne~~~~~v~~~~~~l~i~v 689 (1006)
+..|.|+|+|++|++|++++ . .|++||||++.+++ ...||+++++++||.|||+|.|.+......|.|+|
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d---~-~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V 92 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKD---I-LGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEV 92 (153)
T ss_dssp TTCEEEEEEEEEEESCC-----------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEE
T ss_pred CCccEEEEEEEEeeCCCCCC---C-CCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEE
Confidence 46799999999999998864 4 78999999999963 67899999999999999999999988888999999
Q ss_pred EECCCCCcCCCCCCCCceeEEEEEEcccccCCce------EeeEEEeeeeccCCcccccEEEEEEEEec
Q 042999 690 FDNWRMFADASEERPDYRIGKIRIRVSTLENNKV------YTTSYPLLVLLRTGLKKMGEIELAVRFVC 752 (1006)
Q Consensus 690 ~d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~------~~~~~~L~~~~~~g~~~~G~l~l~~~~~~ 752 (1006)
||+|.++ +|++||.+.|+|.++..+.. ...||+|......+ +..|+|+|++.|.+
T Consensus 93 ~d~d~~~-------~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 93 FDENRLT-------RDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKS-RVKGYLRLKMTYLP 153 (153)
T ss_dssp EECCSSS-------CCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTC-CCCSEEEEEEEECC
T ss_pred EECCCCc-------CCCeeEEEEEEHHHcccCCCcccccccccccccccccCCC-CcceEEEEEEEEeC
Confidence 9999887 89999999999999976542 25899997754333 34599999999963
No 11
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.79 E-value=7.9e-19 Score=168.55 Aligned_cols=125 Identities=20% Similarity=0.244 Sum_probs=111.6
Q ss_pred CcccEEEEEEEEecCCCCCCCCCCCCcEEEEEECCeEEEeeCcC-CCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeCCC
Q 042999 13 FTVRKLVVEVVDARDLLPKDGQGSSSPYVIADFDGQRKRTSTKF-RDLNPVWNEPLEFIVSDPKNMDCEELEIEVYNDKR 91 (1006)
Q Consensus 13 ~~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~~~~kT~~~~-~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~d~ 91 (1006)
...+.|.|+|++|++|+.++..|.+||||++++++++++|++++ +++||+|||+|.|.+... ...|.|+|||++.
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~----~~~l~~~V~d~~~ 82 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEG----TTELKAKIFDKDV 82 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESS----CCEEEEEECCSSS
T ss_pred CCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCC----CCEEEEEEEECCC
Confidence 35789999999999999999889999999999999999999998 899999999999999873 5689999999999
Q ss_pred CCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceecCCceeeeEEEEEEEEEEecC
Q 042999 92 YCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKKSVFSWIRGEIGLRIYYYDEL 149 (1006)
Q Consensus 92 ~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~~~~ 149 (1006)
+ ++|++||++.+++.++...+.....|++|.+. ....|+|++++.|.+..
T Consensus 83 ~-----~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~---~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 83 G-----TEDDAVGEATIPLEPVFVEGSIPPTAYNVVKD---EEYKGEIWVALSFKPSG 132 (136)
T ss_dssp C-----TTTCCSEEEEEESHHHHHHSEEEEEEEEEEET---TEEEEEEEEEEEEEECC
T ss_pred C-----CCCceEEEEEEEHHHhccCCCCCcEEEEeecC---CccCEEEEEEEEEEeCC
Confidence 8 78999999999999975656556789999832 35689999999999876
No 12
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.78 E-value=1.5e-18 Score=174.37 Aligned_cols=126 Identities=19% Similarity=0.330 Sum_probs=101.7
Q ss_pred CCcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECC------EEEEeecccCCCCCeeccEEEEEEeCCCcEEEEEE
Q 042999 616 PPVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGK------KWVRTRTITDCFDPRWNEQYTWQVYDPCTVLTVGV 689 (1006)
Q Consensus 616 ~~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~------~~~rT~~~~~~~nP~wne~~~~~v~~~~~~l~i~v 689 (1006)
...|.|+|+|++|++|++++ . .|++||||++.+++ ..+||+++++++||.|||.|.|.+......|.|+|
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d---~-~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V 80 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKD---I-LGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEV 80 (176)
T ss_dssp TTCEEEEEEEEEEESCC------C-CCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEE
T ss_pred CCcEEEEEEEEEeeCCCCcC---C-CCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEE
Confidence 46799999999999998864 4 78999999999975 67899999999999999999999998778999999
Q ss_pred EECCCCCcCCCCCCCCceeEEEEEEcccccCCceE-e-----eEEEeeeeccCCcccccEEEEEEEEecC
Q 042999 690 FDNWRMFADASEERPDYRIGKIRIRVSTLENNKVY-T-----TSYPLLVLLRTGLKKMGEIELAVRFVCP 753 (1006)
Q Consensus 690 ~d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~-~-----~~~~L~~~~~~g~~~~G~l~l~~~~~~~ 753 (1006)
||+|.++ +|++||.+.|+|.++..+... + .||+|......+. ..|+|+|+++|.+.
T Consensus 81 ~d~d~~~-------~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~-~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 81 FDENRLT-------RDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSR-VKGYLRLKMTYLPK 142 (176)
T ss_dssp EECC-----------CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCC-CCSEEEEEEEECC-
T ss_pred EECCCCC-------CCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCc-cCEEEEEEEEEEeC
Confidence 9999987 899999999999999876432 2 7999987554443 35999999999864
No 13
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=3.7e-18 Score=164.75 Aligned_cols=129 Identities=23% Similarity=0.226 Sum_probs=110.0
Q ss_pred CcccEEEEEEEEecCCCCCCCCCCCCcEEEEEECCeEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeCCCC
Q 042999 13 FTVRKLVVEVVDARDLLPKDGQGSSSPYVIADFDGQRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYNDKRY 92 (1006)
Q Consensus 13 ~~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~d~~ 92 (1006)
...+.|.|+|++|++|+.++. |.+||||++++++++++|+++++++||+|||+|.|.+..........|.|+|||++.+
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~ 82 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETI 82 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCS
T ss_pred CCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCC
Confidence 456899999999999999998 9999999999999999999999999999999999999764322367899999999998
Q ss_pred CCCCCCCCceeEEEEEeCeeeeeeCCceeEEEE---ceecCCceeeeEEEEEEEEEEecC
Q 042999 93 CNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFP---LEKKSVFSWIRGEIGLRIYYYDEL 149 (1006)
Q Consensus 93 ~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~---L~~~~~~~~~~G~i~l~~~~~~~~ 149 (1006)
++|++||++.+++.++ ..+.....|++ |.+... ....|+|++++.|.+..
T Consensus 83 -----~~~~~lG~~~i~l~~l-~~~~~~~~w~~l~~l~~~~~-~~~~G~l~l~~~~~p~~ 135 (140)
T 2dmh_A 83 -----GQNKLIGTATVALKDL-TGDQSRSLPYKLISLLNEKG-QDTGATIDLVIGYDPPS 135 (140)
T ss_dssp -----SSCCCCEEEEEEGGGT-CSSSCEEEEEEEEEEECTTC-CEEEEEEEEEEEECCCB
T ss_pred -----CCCceEEEEEEEHHHh-ccCCCceeEEeeeeccCCCC-CCCCCEEEEEEEEECCC
Confidence 7899999999999996 45555667987 554332 24579999999999865
No 14
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.78 E-value=1.5e-18 Score=170.30 Aligned_cols=129 Identities=28% Similarity=0.421 Sum_probs=103.8
Q ss_pred CCCCcccEEEEEEEEecCCCCCCCCCCCCcEEEEEECC------eEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEE
Q 042999 10 QQQFTVRKLVVEVVDARDLLPKDGQGSSSPYVIADFDG------QRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELE 83 (1006)
Q Consensus 10 ~~~~~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~------~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~ 83 (1006)
......+.|.|+|++|++|+.++..|.+||||+++++. ..++|+++++++||+|||+|.|.+... ...|.
T Consensus 14 ~~~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~----~~~l~ 89 (153)
T 3b7y_A 14 EDEENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ----QHRLL 89 (153)
T ss_dssp SCCTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT----TCEEE
T ss_pred cCCCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC----CCEEE
Confidence 34556789999999999999999889999999999963 578999999999999999999998864 46899
Q ss_pred EEEEeCCCCCCCCCCCCceeEEEEEeCeeeeeeCCc-----eeEEEEceecCCceeeeEEEEEEEEEEe
Q 042999 84 IEVYNDKRYCNGSGRKNHFLGRVKLCGSQFARRGDE-----GLVYFPLEKKSVFSWIRGEIGLRIYYYD 147 (1006)
Q Consensus 84 i~V~d~d~~~~~~~~~d~~lG~~~v~l~~l~~~~~~-----~~~w~~L~~~~~~~~~~G~i~l~~~~~~ 147 (1006)
|+|||++.+ ++|++||++.+++.++...... ..+|++|.+....+...|+|++++.|.|
T Consensus 90 ~~V~d~d~~-----~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 90 FEVFDENRL-----TRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp EEEEECCSS-----SCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred EEEEECCCC-----cCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 999999998 7899999999999997544332 2489999876545567899999999975
No 15
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.78 E-value=1.3e-18 Score=166.31 Aligned_cols=123 Identities=29% Similarity=0.479 Sum_probs=108.8
Q ss_pred CcccEEEEEEEEecCCCCCCCCCCCCcEEEEEECCeEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeCCCC
Q 042999 13 FTVRKLVVEVVDARDLLPKDGQGSSSPYVIADFDGQRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYNDKRY 92 (1006)
Q Consensus 13 ~~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~d~~ 92 (1006)
...+.|.|+|++|++|+.++..|.+||||++.+++++++|+++++++||+|||+|.|.+... ...|.|+|||++..
T Consensus 10 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~----~~~l~i~V~d~d~~ 85 (133)
T 2ep6_A 10 KDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDI----HDVLEVTVFDEDGD 85 (133)
T ss_dssp CCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCT----TCEEEEEEEEEETT
T ss_pred CCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCC----CCEEEEEEEECCCC
Confidence 35789999999999999999889999999999999999999999999999999999999864 46899999999998
Q ss_pred CCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceecCCceeeeEEEEEEEEEEe
Q 042999 93 CNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKKSVFSWIRGEIGLRIYYYD 147 (1006)
Q Consensus 93 ~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~~ 147 (1006)
+++++||++.+++.++ ..+. .+|++|.+........|+|++++.|..
T Consensus 86 -----~~~~~lG~~~i~l~~l-~~~~--~~w~~L~~~~~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 86 -----KPPDFLGKVAIPLLSI-RDGQ--PNCYVLKNKDLEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp -----EEEEECCBCEEEGGGC-CSSC--CEECCCBCSCTTSCCSSEEEEEEEEEE
T ss_pred -----CCCCeeEEEEEEHHHc-cCCC--ceEEEeecCCCCCccceEEEEEEEEEe
Confidence 7899999999999996 3332 479999876555567899999999864
No 16
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.78 E-value=4.6e-18 Score=165.77 Aligned_cols=126 Identities=29% Similarity=0.460 Sum_probs=107.8
Q ss_pred cccEEEEEEEEecCCCCCCCCCCCCcEEEEEECCeEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeCCCCC
Q 042999 14 TVRKLVVEVVDARDLLPKDGQGSSSPYVIADFDGQRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYNDKRYC 93 (1006)
Q Consensus 14 ~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~d~~~ 93 (1006)
..+.|.|+|++|++|+.++..|.+||||++.+++++++|+++++++||+|||+|.|.+... ...|.|+|||++...
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~----~~~l~~~v~d~d~~~ 90 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNS----SDRIKVRVLDEDDDI 90 (148)
T ss_dssp CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECST----TCEEEEEEEECCCSH
T ss_pred cccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCC----CCEEEEEEEECCCCc
Confidence 4689999999999999999999999999999999999999999999999999999999875 468999999999730
Q ss_pred ------CCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceecCCceeeeEEEEEEEEEE
Q 042999 94 ------NGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKKSVFSWIRGEIGLRIYYY 146 (1006)
Q Consensus 94 ------~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~ 146 (1006)
....+++++||++.+++.++ .....+|++|.+.+..+...|+|+|++.|.
T Consensus 91 ~~~~~~~~~~~~~~~lG~~~i~l~~l---~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 91 KSRVKQRFKRESDDFLGQTIIEVRTL---SGEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHHTTTSSCSSEEEEEEEEEGGGC---CSEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred cccccccccCCCCccEEEEEEEHHHC---cCCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 00004799999999999996 344568999997766666789999999985
No 17
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.77 E-value=2e-18 Score=165.57 Aligned_cols=120 Identities=18% Similarity=0.198 Sum_probs=100.6
Q ss_pred CcEEEEEEEeeccCCccCccCC---C----CCCCCCeEEEEEECCEE-EEeecccCCCCCeeccEEEEEEeCCCcEEEEE
Q 042999 617 PVGILELGILGARGLLPMKTKN---G----GKGSTDAYCVAKYGKKW-VRTRTITDCFDPRWNEQYTWQVYDPCTVLTVG 688 (1006)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~~~~d---~----~~g~sdpyv~v~~~~~~-~rT~~~~~~~nP~wne~~~~~v~~~~~~l~i~ 688 (1006)
..|.|+|+|++|+||+++|... . ..+.+||||++.+++.. .+|+++++|+||+|||+|.|.+.+. ..|.|+
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~ 82 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIELA 82 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEEE
Confidence 3689999999999999865200 0 01239999999998765 5999999999999999999999776 789999
Q ss_pred EEECCCCCcCCCCCCCCceeEEEEEEcccccCC--ceEeeEEEeeeeccCCcccccEEEEEEEEec
Q 042999 689 VFDNWRMFADASEERPDYRIGKIRIRVSTLENN--KVYTTSYPLLVLLRTGLKKMGEIELAVRFVC 752 (1006)
Q Consensus 689 v~d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~--~~~~~~~~L~~~~~~g~~~~G~l~l~~~~~~ 752 (1006)
|||+|.++ +|++||.+.|+|.++..+ ...+.||+|.. .|+|+|+++|..
T Consensus 83 V~d~d~~~-------~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~--------~G~i~l~l~~~~ 133 (136)
T 1gmi_A 83 VFHDAPIG-------YDDFVANCTIQFEELLQNGSRHFEDWIDLEP--------EGKVYVIIDLSG 133 (136)
T ss_dssp EEECCSSS-------SCEEEEEEEEEHHHHTSTTCSEEEEEEECBS--------SCEEEEEEEEEE
T ss_pred EEeCCCCC-------CCCEEEEEEEEHHHhcccCCCCccEEEEcCC--------CeEEEEEEEEEe
Confidence 99999887 899999999999999864 34588998842 499999999975
No 18
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.77 E-value=2.7e-18 Score=172.53 Aligned_cols=128 Identities=27% Similarity=0.394 Sum_probs=103.0
Q ss_pred CCcccEEEEEEEEecCCCCCCCCCCCCcEEEEEECC------eEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEE
Q 042999 12 QFTVRKLVVEVVDARDLLPKDGQGSSSPYVIADFDG------QRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIE 85 (1006)
Q Consensus 12 ~~~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~------~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~ 85 (1006)
....+.|.|+|++|++|+.++..|.+||||++++++ .+++|+++++++||+|||+|.|.+... ...|.|+
T Consensus 4 ~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~----~~~L~~~ 79 (176)
T 3m7f_B 4 NDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ----RHRILFE 79 (176)
T ss_dssp CTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT----TCEEEEE
T ss_pred CCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC----CCEEEEE
Confidence 346789999999999999999889999999999974 578999999999999999999999864 4689999
Q ss_pred EEeCCCCCCCCCCCCceeEEEEEeCeeeeeeCCcee-----EEEEceecCCceeeeEEEEEEEEEEec
Q 042999 86 VYNDKRYCNGSGRKNHFLGRVKLCGSQFARRGDEGL-----VYFPLEKKSVFSWIRGEIGLRIYYYDE 148 (1006)
Q Consensus 86 V~d~d~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~-----~w~~L~~~~~~~~~~G~i~l~~~~~~~ 148 (1006)
|||++.+ ++|++||++.++|.++........ +||+|..+...++..|+|+|++.|.+.
T Consensus 80 V~d~d~~-----~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 80 VFDENRL-----TRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp EEECC---------CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred EEECCCC-----CCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 9999998 789999999999999754433211 799999876666678999999999987
No 19
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.77 E-value=2.1e-18 Score=167.46 Aligned_cols=116 Identities=26% Similarity=0.309 Sum_probs=100.6
Q ss_pred cccEEEEEEEEecCCCCCCC----------CCCCCcEEEEEECCeE-EEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceE
Q 042999 14 TVRKLVVEVVDARDLLPKDG----------QGSSSPYVIADFDGQR-KRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEEL 82 (1006)
Q Consensus 14 ~~~~L~V~v~~a~~L~~~~~----------~g~~dPyv~v~~~~~~-~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L 82 (1006)
..+.|+|+|++|++|+++|. .|.+||||++.+++++ .+|+++++|+||+|||+|.|.+.. ...|
T Consensus 27 ~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-----~~~L 101 (157)
T 2fk9_A 27 FNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-----GGHL 101 (157)
T ss_dssp EEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-----ECEE
T ss_pred CccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-----CCEE
Confidence 46899999999999998873 3679999999999866 799999999999999999999875 3589
Q ss_pred EEEEEeCCCCCCCCCCCCceeEEEEEeCeeeeee---CCceeEEEEceecCCceeeeEEEEEEEEEE
Q 042999 83 EIEVYNDKRYCNGSGRKNHFLGRVKLCGSQFARR---GDEGLVYFPLEKKSVFSWIRGEIGLRIYYY 146 (1006)
Q Consensus 83 ~i~V~d~d~~~~~~~~~d~~lG~~~v~l~~l~~~---~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~ 146 (1006)
.|+|||+|.+ ++|++||++.++++++... +.....||+|.+ +|+|+|+++|.
T Consensus 102 ~~~V~D~d~~-----~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~-------~G~i~l~l~~~ 156 (157)
T 2fk9_A 102 ELAVFHETPL-----GYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP-------EGKVFVVITLT 156 (157)
T ss_dssp EEEEEECCSS-----SSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS-------SCEEEEEEEEC
T ss_pred EEEEEECCCC-----CCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC-------CcEEEEEEEEE
Confidence 9999999999 7899999999999997543 245678999964 79999999874
No 20
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.77 E-value=1.4e-18 Score=164.46 Aligned_cols=118 Identities=16% Similarity=0.212 Sum_probs=99.7
Q ss_pred cEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECC---EEEEeecccCCCCCeeccEEEEEEeC-CCcEEEEEEEECC
Q 042999 618 VGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGK---KWVRTRTITDCFDPRWNEQYTWQVYD-PCTVLTVGVFDNW 693 (1006)
Q Consensus 618 ~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~---~~~rT~~~~~~~nP~wne~~~~~v~~-~~~~l~i~v~d~~ 693 (1006)
.|.|.|+|++|+||++++..|. .|++||||++.+++ +..||+++++++||+|||+|.|.+.. ....|.|+|||+|
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~-~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d 80 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDM-LDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN 80 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHH-HCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECC
T ss_pred CcEEEEEEEeeeCCCCCCcccc-CCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECC
Confidence 4899999999999998643344 68999999999985 78999999999999999999999964 4578999999999
Q ss_pred CCCcCCCCCCCCceeEEEEEEcccccCCceEeeEEEeeeeccCCcccccEEEEEEEE
Q 042999 694 RMFADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLLVLLRTGLKKMGEIELAVRF 750 (1006)
Q Consensus 694 ~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~~ 750 (1006)
.. +|++||.+.|+|.++..+.....||+|.. ...|+|++++..
T Consensus 81 ~~--------~~~~iG~~~i~l~~l~~~~~~~~~~~L~~------~~~g~i~~~le~ 123 (126)
T 1rlw_A 81 YV--------MDETLGTATFTVSSMKVGEKKEVPFIFNQ------VTEMVLEMSLEV 123 (126)
T ss_dssp SS--------CCEEEEEEEEEGGGSCTTCEEEEEEEETT------TEEEEEEEEEEC
T ss_pred CC--------CCceeEEEEEEHHHccCCCcEEEEEEcCC------CceEEEEEEEEe
Confidence 75 48899999999999999988899999953 123667766554
No 21
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.74 E-value=1.3e-17 Score=159.16 Aligned_cols=121 Identities=29% Similarity=0.417 Sum_probs=103.3
Q ss_pred ccEEEEEEEEecCCCCCCCCCCCCcEEEEEECC--eEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeCCCC
Q 042999 15 VRKLVVEVVDARDLLPKDGQGSSSPYVIADFDG--QRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYNDKRY 92 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~--~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~d~~ 92 (1006)
...|+|+|++|++|+++|..|.+||||++.+++ +.++|+++++++||+|||+|.|.+... ..|.|+|||++.+
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-----~~l~~~v~d~d~~ 78 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT-----DSITISVWNHKKI 78 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT-----CCEEEEEEEGGGT
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC-----CEEEEEEEECCCC
Confidence 467999999999999999999999999999974 789999999999999999999999774 3599999999988
Q ss_pred CCCCCCC---CceeEEEEEeCeeeeeeCCceeEEEEceecC--CceeeeEEEEEEEEE
Q 042999 93 CNGSGRK---NHFLGRVKLCGSQFARRGDEGLVYFPLEKKS--VFSWIRGEIGLRIYY 145 (1006)
Q Consensus 93 ~~~~~~~---d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~--~~~~~~G~i~l~~~~ 145 (1006)
++ |++||++.++++.+........+|++|.... ......|+|.+++.+
T Consensus 79 -----~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 79 -----HKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp -----TSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred -----CCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 44 8999999999998645555556899998752 333568999999875
No 22
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.74 E-value=1.6e-17 Score=165.27 Aligned_cols=126 Identities=21% Similarity=0.280 Sum_probs=105.6
Q ss_pred cccEEEEEEEEecCCCCCCCCCCCCcEEEEEECCeEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeCCCCC
Q 042999 14 TVRKLVVEVVDARDLLPKDGQGSSSPYVIADFDGQRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYNDKRYC 93 (1006)
Q Consensus 14 ~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~d~~~ 93 (1006)
..+.|.|+|++|++|+.++..+.+||||++++++++++|+++++++||+|||+|.|.+.. ...|.|+|||++.+
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~-----~~~L~~~V~D~d~~- 107 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP-----VSKLHFRVWSHQTL- 107 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT-----TCEEEEEEEECCSS-
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC-----CCEEEEEEEECCCC-
Confidence 467899999999999944444559999999999999999999999999999999999853 56899999999998
Q ss_pred CCCCCCCceeEEEEEeCeeeeeeCCc----eeEEEEceecCCceeeeEEEEEEEEEEecC
Q 042999 94 NGSGRKNHFLGRVKLCGSQFARRGDE----GLVYFPLEKKSVFSWIRGEIGLRIYYYDEL 149 (1006)
Q Consensus 94 ~~~~~~d~~lG~~~v~l~~l~~~~~~----~~~w~~L~~~~~~~~~~G~i~l~~~~~~~~ 149 (1006)
++|++||++.+++.++...... ...|++|.+........|+|.+.+.++...
T Consensus 108 ----~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~~ 163 (173)
T 2nq3_A 108 ----KSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQLE 163 (173)
T ss_dssp ----SCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEECC
T ss_pred ----CCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeecc
Confidence 7899999999999997543221 257999998644446789999999999775
No 23
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.73 E-value=1.7e-17 Score=158.24 Aligned_cols=124 Identities=17% Similarity=0.233 Sum_probs=99.0
Q ss_pred cEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECC--EEEEeecccCCCCCeeccEEEEEEeCCCcEEEEEEEECCCC
Q 042999 618 VGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGK--KWVRTRTITDCFDPRWNEQYTWQVYDPCTVLTVGVFDNWRM 695 (1006)
Q Consensus 618 ~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~--~~~rT~~~~~~~nP~wne~~~~~v~~~~~~l~i~v~d~~~~ 695 (1006)
...|+|+|++|++|+++| . .|++||||++.+++ +..||+++++++||+|||+|.|.+.++.. |.|+|||+|.+
T Consensus 4 ~~~L~V~v~~a~~L~~~d---~-~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~-l~~~v~d~d~~ 78 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKD---F-FRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTDS-ITISVWNHKKI 78 (132)
T ss_dssp EEEEEEEEEEEESCCCCS---T-TCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTCC-EEEEEEEGGGT
T ss_pred eEEEEEEEEEeECCCCCC---C-CCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCCE-EEEEEEECCCC
Confidence 468999999999998865 4 78999999999974 78999999999999999999999987654 99999999987
Q ss_pred CcCCCCCCCCceeEEEEEEccccc-CCceEeeEEEeeeeccCC-cccccEEEEEEEE
Q 042999 696 FADASEERPDYRIGKIRIRVSTLE-NNKVYTTSYPLLVLLRTG-LKKMGEIELAVRF 750 (1006)
Q Consensus 696 ~~~~~~~~~d~~lG~~~i~l~~l~-~~~~~~~~~~L~~~~~~g-~~~~G~l~l~~~~ 750 (1006)
+.. ..|++||.+.|++..+. .......|++|....+.+ .+..|+|++++.+
T Consensus 79 ~~~----~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 79 HKK----QGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TSS----TTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCC----CCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 600 02899999999998882 222224789997754322 2345999998865
No 24
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.73 E-value=1.2e-17 Score=160.03 Aligned_cols=118 Identities=19% Similarity=0.310 Sum_probs=100.9
Q ss_pred cccEEEEEEEEecCCCCCCCCC-----------CCCcEEEEEECCeE-EEeeCcCCCCCCeeeeEEEEEeeCCCCCCCce
Q 042999 14 TVRKLVVEVVDARDLLPKDGQG-----------SSSPYVIADFDGQR-KRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEE 81 (1006)
Q Consensus 14 ~~~~L~V~v~~a~~L~~~~~~g-----------~~dPyv~v~~~~~~-~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~ 81 (1006)
..+.|.|+|++|++|+++|..+ .+||||++.++++. .+|+++++|+||+|||+|.|.+... ..
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-----~~ 78 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-----RK 78 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-----CE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-----CE
Confidence 3578999999999999887443 39999999998765 7999999999999999999998763 58
Q ss_pred EEEEEEeCCCCCCCCCCCCceeEEEEEeCeeeeeeCC-ceeEEEEceecCCceeeeEEEEEEEEEEec
Q 042999 82 LEIEVYNDKRYCNGSGRKNHFLGRVKLCGSQFARRGD-EGLVYFPLEKKSVFSWIRGEIGLRIYYYDE 148 (1006)
Q Consensus 82 L~i~V~d~d~~~~~~~~~d~~lG~~~v~l~~l~~~~~-~~~~w~~L~~~~~~~~~~G~i~l~~~~~~~ 148 (1006)
|.|+|||+|.+ ++|++||++.+++.++...+. ....|++|.+ +|+|+++++|...
T Consensus 79 L~~~V~d~d~~-----~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~-------~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 79 IELAVFHDAPI-----GYDDFVANCTIQFEELLQNGSRHFEDWIDLEP-------EGKVYVIIDLSGS 134 (136)
T ss_dssp EEEEEEECCSS-----SSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS-------SCEEEEEEEEEEE
T ss_pred EEEEEEeCCCC-----CCCCEEEEEEEEHHHhcccCCCCccEEEEcCC-------CeEEEEEEEEEec
Confidence 99999999998 789999999999999755433 3468999864 6999999999764
No 25
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.73 E-value=1.5e-17 Score=157.23 Aligned_cols=117 Identities=26% Similarity=0.367 Sum_probs=100.0
Q ss_pred ccEEEEEEEEecCCCCC---CCCCCCCcEEEEEECC---eEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEe
Q 042999 15 VRKLVVEVVDARDLLPK---DGQGSSSPYVIADFDG---QRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYN 88 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~---~~~g~~dPyv~v~~~~---~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d 88 (1006)
.+.|.|+|++|++|+.+ +..|.+||||++.+++ ++++|+++++++||+|||+|.|.+.... ...|.|+|||
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~---~~~l~i~V~d 78 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQ---ENVLEITLMD 78 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTS---CCEEEEEEEE
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCC---CCEEEEEEEE
Confidence 47899999999999984 5568999999999985 7799999999999999999999996543 5689999999
Q ss_pred CCCCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceecCCceeeeEEEEEEEEEE
Q 042999 89 DKRYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKKSVFSWIRGEIGLRIYYY 146 (1006)
Q Consensus 89 ~d~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~ 146 (1006)
++.. ++++||++.+++.++ ..+.....|++|.+. ..|+|+++++..
T Consensus 79 ~d~~------~~~~iG~~~i~l~~l-~~~~~~~~~~~L~~~-----~~g~i~~~le~~ 124 (126)
T 1rlw_A 79 ANYV------MDETLGTATFTVSSM-KVGEKKEVPFIFNQV-----TEMVLEMSLEVA 124 (126)
T ss_dssp CCSS------CCEEEEEEEEEGGGS-CTTCEEEEEEEETTT-----EEEEEEEEEECC
T ss_pred CCCC------CCceeEEEEEEHHHc-cCCCcEEEEEEcCCC-----ceEEEEEEEEeC
Confidence 9988 589999999999996 566667799999763 278888877644
No 26
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=5.7e-17 Score=156.51 Aligned_cols=106 Identities=20% Similarity=0.280 Sum_probs=93.5
Q ss_pred CcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEEC---CEEEEeecccCCCCCeeccEEEEEEeC----CCcEEEEEE
Q 042999 617 PVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYG---KKWVRTRTITDCFDPRWNEQYTWQVYD----PCTVLTVGV 689 (1006)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~---~~~~rT~~~~~~~nP~wne~~~~~v~~----~~~~l~i~v 689 (1006)
..+.|.|+|++|++|++++ . .|.+||||++.+. .+..||+++++++||+|||+|.|.+.. ....|.|+|
T Consensus 24 ~~~~L~v~v~~a~~L~~~d---~-~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V 99 (141)
T 2d8k_A 24 QESTLTVKIMKAQELPAKD---F-SGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQV 99 (141)
T ss_dssp SSCCEEEEEEEEESCCCCS---S-SSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEE
T ss_pred CCCEEEEEEEEeECCCCCC---C-CCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEE
Confidence 3478999999999999864 4 7899999999993 468899999999999999999998643 357899999
Q ss_pred EECCCCCcCCCCCCCCceeEEEEEEcccccCCceEeeEEEeeee
Q 042999 690 FDNWRMFADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLLVL 733 (1006)
Q Consensus 690 ~d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 733 (1006)
||+|.++ +|++||.+.|+|.++..+...+.||+|...
T Consensus 100 ~d~d~~~-------~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 100 LDYDRFS-------RNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp EECCSSS-------SCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred EECCCCC-------CCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 9999987 899999999999999988778899999764
No 27
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.72 E-value=2.6e-17 Score=163.75 Aligned_cols=123 Identities=15% Similarity=0.173 Sum_probs=101.7
Q ss_pred CcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECCEEEEeecccCCCCCeeccEEEEEEeCCCcEEEEEEEECCCCC
Q 042999 617 PVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGKKWVRTRTITDCFDPRWNEQYTWQVYDPCTVLTVGVFDNWRMF 696 (1006)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~~~~rT~~~~~~~nP~wne~~~~~v~~~~~~l~i~v~d~~~~~ 696 (1006)
..+.|+|+|++|++|++.+ + .+++||||+|.++++..||+++++++||+|||+|.|.+. +...|.|+|||+|.++
T Consensus 34 ~~~~L~V~V~~A~~L~~~~--~--~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~-~~~~L~~~V~D~d~~~ 108 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKK--N--WFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVT-PVSKLHFRVWSHQTLK 108 (173)
T ss_dssp CCEEEEEEEEEEEECCCC------CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEEC-TTCEEEEEEEECCSSS
T ss_pred CceEEEEEEEEeECCCCcc--c--CCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeC-CCCEEEEEEEECCCCC
Confidence 5789999999999998432 2 445999999999999999999999999999999999984 5889999999999987
Q ss_pred cCCCCCCCCceeEEEEEEcccccCC---c--eEeeEEEeeeeccCCcccccEEEEEEEEec
Q 042999 697 ADASEERPDYRIGKIRIRVSTLENN---K--VYTTSYPLLVLLRTGLKKMGEIELAVRFVC 752 (1006)
Q Consensus 697 ~~~~~~~~d~~lG~~~i~l~~l~~~---~--~~~~~~~L~~~~~~g~~~~G~l~l~~~~~~ 752 (1006)
+|++||.+.|+|.++..+ . ....|++|..... +.+..|+|.+.+.|-.
T Consensus 109 -------~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~-~~~~~G~L~v~l~~l~ 161 (173)
T 2nq3_A 109 -------SDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKE-PTETIGDLSICLDGLQ 161 (173)
T ss_dssp -------CCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSC-TTSEEEEEEEEEESEE
T ss_pred -------CCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCC-CCcccEEEEEEEeeee
Confidence 899999999999998642 1 1257999987532 2334599999888763
No 28
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.71 E-value=1.4e-17 Score=162.27 Aligned_cols=123 Identities=17% Similarity=0.221 Sum_probs=102.7
Q ss_pred ceeeeEEEEEeeeCCccccccccccCCCCCccccccCCCCcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEEC----
Q 042999 578 SYCGRIQLKLCLEGGYHVLDEAAHVCSDFRPTAKQLWKPPVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYG---- 653 (1006)
Q Consensus 578 ~~~G~l~l~v~l~~~~~~~d~~~~~~~~~~p~~~~l~~~~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~---- 653 (1006)
...|+|.+.+.... ..|.|.|+|++|+||++++. . +|.+||||++.++
T Consensus 7 ~~~G~l~~sl~y~~-------------------------~~~~L~V~v~~a~~L~~~d~--~-~~~~dpyv~v~l~~~~~ 58 (148)
T 3fdw_A 7 FVTGRIAFSLKYEQ-------------------------QTQSLVVHVKECHQLAYADE--A-KKRSNPYVKTYLLPDKS 58 (148)
T ss_dssp CCCCEEEEEEEEET-------------------------TTTEEEEEEEEEESCCCSBT--T-TTBCCEEEEEEEETCCS
T ss_pred ccceEEEEEEEEeC-------------------------CCCEEEEEEEEecCCCCccc--C-CCCCCeEEEEEEEcCCc
Confidence 34788888876542 35799999999999998652 3 7889999999996
Q ss_pred -CEEEEeecccCCCCCeeccEEEEEEeCC---CcEEEEEEEECCCCCcCCCCCCCCceeEEEEEEcccccCCceEeeEEE
Q 042999 654 -KKWVRTRTITDCFDPRWNEQYTWQVYDP---CTVLTVGVFDNWRMFADASEERPDYRIGKIRIRVSTLENNKVYTTSYP 729 (1006)
Q Consensus 654 -~~~~rT~~~~~~~nP~wne~~~~~v~~~---~~~l~i~v~d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~ 729 (1006)
....||+++++++||+|||+|.|.+... ...|.|+|||+|.++ +|++||.+.|+|.++..+.....||+
T Consensus 59 ~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~~~-------~~~~iG~~~i~l~~l~~~~~~~~W~~ 131 (148)
T 3fdw_A 59 RQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGRFG-------RNTFLGEAEIQMDSWKLDKKLDHCLP 131 (148)
T ss_dssp GGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECGGG-------CEEEEEEEEEEHHHHHHHCCSEEEEE
T ss_pred ccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCCCc-------CCcEEEEEEEEcccccccCCccceEE
Confidence 3488999999999999999999998763 447999999999987 89999999999999987766789999
Q ss_pred eeeecc
Q 042999 730 LLVLLR 735 (1006)
Q Consensus 730 L~~~~~ 735 (1006)
|..+..
T Consensus 132 L~~~~~ 137 (148)
T 3fdw_A 132 LHGKIS 137 (148)
T ss_dssp CBCC--
T ss_pred CcCccc
Confidence 987543
No 29
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.71 E-value=5.4e-17 Score=158.77 Aligned_cols=105 Identities=25% Similarity=0.310 Sum_probs=93.5
Q ss_pred CcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEE---CCEEEEeecccCCCCCeeccEEEEEEeC---CCcEEEEEEE
Q 042999 617 PVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKY---GKKWVRTRTITDCFDPRWNEQYTWQVYD---PCTVLTVGVF 690 (1006)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~---~~~~~rT~~~~~~~nP~wne~~~~~v~~---~~~~l~i~v~ 690 (1006)
..+.|.|+|++|+||++++ . +|.+||||++.+ +.+..||+++++++||+|||+|.|.+.. ....|.|+||
T Consensus 40 ~~~~L~V~v~~a~~L~~~d---~-~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~ 115 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPALD---M-GGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVY 115 (152)
T ss_dssp TTTEEEEEEEEEESCCCCS---T-TSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEE
T ss_pred CCCEEEEEEEEeECCCCcc---C-CCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEE
Confidence 3478999999999998864 4 789999999999 4568899999999999999999999864 3578999999
Q ss_pred ECCCCCcCCCCCCCCceeEEEEEEcccccCCceEeeEEEeee
Q 042999 691 DNWRMFADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLLV 732 (1006)
Q Consensus 691 d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 732 (1006)
|+|.++ +|++||++.|+|.++..+...+.||+|..
T Consensus 116 d~d~~~-------~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 116 DFDRFS-------KHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp ECCSSS-------CCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred ECCCCC-------CCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 999887 89999999999999988888899999964
No 30
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.70 E-value=3.7e-17 Score=159.58 Aligned_cols=104 Identities=16% Similarity=0.088 Sum_probs=90.9
Q ss_pred CcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECC------EEEEeecccCCCCCeeccEEEEEEeC---CCcEEEE
Q 042999 617 PVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGK------KWVRTRTITDCFDPRWNEQYTWQVYD---PCTVLTV 687 (1006)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~------~~~rT~~~~~~~nP~wne~~~~~v~~---~~~~l~i 687 (1006)
..|.|.|+|++|+||+++| . +|++||||++.+.+ ...||+++++|+||+|||+|.|.+.. ....|.|
T Consensus 41 ~~~~L~V~Vi~a~~L~~~d---~-~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~ 116 (155)
T 2z0u_A 41 KNKQFAILIIQLSNLSALL---Q-QQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRV 116 (155)
T ss_dssp TTTEEEEEEEEEECGGGTC---C-SCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEE
T ss_pred CCCEEEEEEEEccCcCCcc---c-CCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEE
Confidence 3579999999999999865 4 88999999999964 27899999999999999999999865 2468999
Q ss_pred EEEECCCCCcCCCCCCCCceeEEEEEEcccccC-CceEeeEEEee
Q 042999 688 GVFDNWRMFADASEERPDYRIGKIRIRVSTLEN-NKVYTTSYPLL 731 (1006)
Q Consensus 688 ~v~d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~-~~~~~~~~~L~ 731 (1006)
+|||+|.++ +|++||.+.|+|.++.. +.....||+|.
T Consensus 117 ~V~d~d~~~-------~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 117 DVCTTDRSH-------LEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEEEECTTS-------CEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred EEEECCCCC-------CCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 999999987 89999999999999963 56678999985
No 31
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.70 E-value=6.5e-17 Score=154.36 Aligned_cols=104 Identities=14% Similarity=0.222 Sum_probs=92.0
Q ss_pred CcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEE-----CCEEEEeecccCCCCCeeccEEEEE-EeC---CCcEEEE
Q 042999 617 PVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKY-----GKKWVRTRTITDCFDPRWNEQYTWQ-VYD---PCTVLTV 687 (1006)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~-----~~~~~rT~~~~~~~nP~wne~~~~~-v~~---~~~~l~i 687 (1006)
..|.|.|+|++|+||++ + . +|.+||||++.+ +....||+++++++||+|||+|.|. +.. ....|.|
T Consensus 18 ~~~~L~V~V~~a~~L~~-~---~-~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~ 92 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVT-E---D-GADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQL 92 (134)
T ss_dssp ETTEEEEEEEEEECCCC-T---T-SCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEE
T ss_pred cCCEEEEEEEEeeCCCC-C---C-CCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEE
Confidence 34799999999999985 3 3 788999999999 4568899999999999999999999 653 4578999
Q ss_pred EEEECCCCCcCCCCCCCCceeEEEEEEcccccCCceEeeEEEeee
Q 042999 688 GVFDNWRMFADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLLV 732 (1006)
Q Consensus 688 ~v~d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 732 (1006)
+|||+|.++ +|++||++.|+|.++..+.....||+|..
T Consensus 93 ~V~d~d~~~-------~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 93 SVLSAESLR-------ENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp EEEECCSSS-------CCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred EEEECCCCC-------CCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 999999987 79999999999999998888899999965
No 32
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.70 E-value=5.9e-17 Score=156.85 Aligned_cols=105 Identities=25% Similarity=0.310 Sum_probs=93.6
Q ss_pred CcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEE---CCEEEEeecccCCCCCeeccEEEEEEeC---CCcEEEEEEE
Q 042999 617 PVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKY---GKKWVRTRTITDCFDPRWNEQYTWQVYD---PCTVLTVGVF 690 (1006)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~---~~~~~rT~~~~~~~nP~wne~~~~~v~~---~~~~l~i~v~ 690 (1006)
..|.|.|+|++|++|++++ . .|.+||||++.+ +.+..||+++++++||+|||+|.|.+.. ....|.|+||
T Consensus 32 ~~~~L~v~v~~a~~L~~~d---~-~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~ 107 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPALD---M-GGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVY 107 (143)
T ss_dssp TTTEEEEEEEEEECCCCBG---G-GBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCCC---C-CCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEE
Confidence 4579999999999999865 3 778999999999 5668999999999999999999999864 3478999999
Q ss_pred ECCCCCcCCCCCCCCceeEEEEEEcccccCCceEeeEEEeee
Q 042999 691 DNWRMFADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLLV 732 (1006)
Q Consensus 691 d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 732 (1006)
|+|.++ +|++||.+.|+|.++..+...+.||+|..
T Consensus 108 d~d~~~-------~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 108 DFDRFS-------KHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp ECCSSS-------CCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred eCCCCC-------CCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 999987 89999999999999998888899999953
No 33
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.70 E-value=6.5e-17 Score=153.59 Aligned_cols=103 Identities=22% Similarity=0.349 Sum_probs=85.5
Q ss_pred CcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEE-----CCEEEEeecccCCCCCeeccEEEEEEeC----CCcEEEE
Q 042999 617 PVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKY-----GKKWVRTRTITDCFDPRWNEQYTWQVYD----PCTVLTV 687 (1006)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~-----~~~~~rT~~~~~~~nP~wne~~~~~v~~----~~~~l~i 687 (1006)
..|.|.|+|++|+||++++ . +|++||||++.+ +....||+++++++||+|||+|.|.+.. ....|.|
T Consensus 16 ~~~~L~v~v~~a~~L~~~d---~-~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~ 91 (129)
T 2bwq_A 16 VGHQLIVTILGAKDLPSRE---D-GRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEI 91 (129)
T ss_dssp TTTEEEEEEEEEESCCCCT---T-SCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEE
T ss_pred CCCEEEEEEEEeeCCCCCC---C-CCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEE
Confidence 3479999999999998864 4 788999999999 4678999999999999999999999643 3468999
Q ss_pred EEEECCCCCcCCCCCCC--CceeEEEEEEcccccCCceEeeEEEee
Q 042999 688 GVFDNWRMFADASEERP--DYRIGKIRIRVSTLENNKVYTTSYPLL 731 (1006)
Q Consensus 688 ~v~d~~~~~~~~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~L~ 731 (1006)
+|||+|.++ + |++||.+.|+|.++.... ...||+|.
T Consensus 92 ~V~d~d~~~-------~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 92 TLWDQARVR-------EEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp EEEEC--------------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred EEEECCcCc-------CcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 999999876 5 999999999999987654 68999983
No 34
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.69 E-value=9.2e-17 Score=157.26 Aligned_cols=106 Identities=26% Similarity=0.365 Sum_probs=91.5
Q ss_pred CcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEE-----CCEEEEeecccCCCCCeeccEEEEEE--eCCCcEEEEEE
Q 042999 617 PVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKY-----GKKWVRTRTITDCFDPRWNEQYTWQV--YDPCTVLTVGV 689 (1006)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~-----~~~~~rT~~~~~~~nP~wne~~~~~v--~~~~~~l~i~v 689 (1006)
..|.|.|+|++|+||++++ .|.+||||++.+ .....||+++++++||+|||+|.|.+ .+....|.|+|
T Consensus 25 ~~~~L~V~v~~a~~L~~~d-----~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V 99 (153)
T 3fbk_A 25 QDRVLLLHIIEGKGLISKQ-----PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTV 99 (153)
T ss_dssp SSSEEEEEEEEEESCCCCS-----SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCC-----CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEE
Confidence 4579999999999999865 468999999998 34578999999999999999999998 44556799999
Q ss_pred EECCCCCcCCCCCCC-CceeEEEEEEcccccC-CceEeeEEEeeeec
Q 042999 690 FDNWRMFADASEERP-DYRIGKIRIRVSTLEN-NKVYTTSYPLLVLL 734 (1006)
Q Consensus 690 ~d~~~~~~~~~~~~~-d~~lG~~~i~l~~l~~-~~~~~~~~~L~~~~ 734 (1006)
||+|.++ + |++||.+.|+|.++.. +.....||+|....
T Consensus 100 ~d~d~~~-------~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 100 WNRASQS-------RQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEH 139 (153)
T ss_dssp EECCSSG-------GGCEEEEEEEEEHHHHTC--CCEEEEEECBCTT
T ss_pred EeCCCCC-------CCCcEEEEEEEEHHHhcCCCCccccEEECCChh
Confidence 9999876 5 8999999999999985 67778999997743
No 35
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.69 E-value=1.3e-16 Score=153.23 Aligned_cols=104 Identities=27% Similarity=0.410 Sum_probs=91.9
Q ss_pred EEEEEEEeeccCCccCccCCCCCCCCCeEEEEEE-----CCEEEEeecccCCCCCeeccEEEEEEeCC--CcEEEEEEEE
Q 042999 619 GILELGILGARGLLPMKTKNGGKGSTDAYCVAKY-----GKKWVRTRTITDCFDPRWNEQYTWQVYDP--CTVLTVGVFD 691 (1006)
Q Consensus 619 g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~-----~~~~~rT~~~~~~~nP~wne~~~~~v~~~--~~~l~i~v~d 691 (1006)
|.|.|+|++|+||++++ . .|.+||||++.+ +....||+++++++||.|||+|.|.+... ...|.|+|||
T Consensus 16 ~~L~v~v~~a~~L~~~d---~-~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d 91 (137)
T 3rdl_A 16 EKLHVTVRDAKNLIPMD---P-NGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWD 91 (137)
T ss_dssp TEEEEEEEEEESCCCCS---T-TSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEE
T ss_pred CEEEEEEEEeeCCCCCC---C-CCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEE
Confidence 68999999999999865 4 789999999999 56789999999999999999999998653 3589999999
Q ss_pred CCCCCcCCCCCCCCceeEEEEEEcccccCCceEeeEEEeeeec
Q 042999 692 NWRMFADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLLVLL 734 (1006)
Q Consensus 692 ~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~ 734 (1006)
+|.++ +|++||.+.|+|.++..+. ...||+|....
T Consensus 92 ~d~~~-------~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~~ 126 (137)
T 3rdl_A 92 WDRTT-------RNDFMGSLSFGVSELMKMP-ASGWYKLLNQE 126 (137)
T ss_dssp CCSSS-------CCEEEEEEEEEHHHHHHSC-EEEEEECBCHH
T ss_pred CCCCC-------CCceEEEEEEeHHHhccCc-cCceEECcCcc
Confidence 99887 8999999999999997655 68999997643
No 36
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.68 E-value=9.3e-17 Score=155.13 Aligned_cols=120 Identities=23% Similarity=0.344 Sum_probs=100.6
Q ss_pred ceeeeEEEEEeeeCCccccccccccCCCCCccccccCCCCcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEE-----
Q 042999 578 SYCGRIQLKLCLEGGYHVLDEAAHVCSDFRPTAKQLWKPPVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKY----- 652 (1006)
Q Consensus 578 ~~~G~l~l~v~l~~~~~~~d~~~~~~~~~~p~~~~l~~~~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~----- 652 (1006)
...|+|.+.+.... ..|.|.|+|++|++|++++ . +|.+||||++.+
T Consensus 5 ~~~G~i~~~l~y~~-------------------------~~~~L~v~v~~a~~L~~~d---~-~g~~dpyv~v~~~~~~~ 55 (141)
T 1v27_A 5 SSGGQLSIKLWFDK-------------------------VGHQLIVTILGAKDLPSRE---D-GRPRNPYVKIYFLPDRS 55 (141)
T ss_dssp CCCCEEEEEEEEET-------------------------TTTEEEEEEEEEESCCCCS---S-SCCCCEEEECCCSSCCS
T ss_pred CcccEEEEEEEEeC-------------------------CCCEEEEEEEEccCCCCcC---C-CCCCCCEEEEEEecCCC
Confidence 44799998876542 3468999999999998865 4 788999999999
Q ss_pred CCEEEEeecccCCCCCeeccEEEEEEeC----CCcEEEEEEEECCCCCcCCCCCCC--CceeEEEEEEcccccCCceEee
Q 042999 653 GKKWVRTRTITDCFDPRWNEQYTWQVYD----PCTVLTVGVFDNWRMFADASEERP--DYRIGKIRIRVSTLENNKVYTT 726 (1006)
Q Consensus 653 ~~~~~rT~~~~~~~nP~wne~~~~~v~~----~~~~l~i~v~d~~~~~~~~~~~~~--d~~lG~~~i~l~~l~~~~~~~~ 726 (1006)
+.+..||+++++++||+|||+|.|.+.. ....|.|+|||+|.++ + |++||.+.|+|.++.... ...
T Consensus 56 ~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~-------~~~~~~lG~~~i~l~~l~~~~-~~~ 127 (141)
T 1v27_A 56 DKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVR-------EEESEFLGEILIELETALLDD-EPH 127 (141)
T ss_dssp SSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBCSSS-------SCCBCCCEEEEEEGGGCCCSS-EEE
T ss_pred CCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECCCCc-------CCCCceEEEEEEEccccCCCC-CCc
Confidence 4678899999999999999999999543 3468999999999876 5 899999999999987654 689
Q ss_pred EEEeeeec
Q 042999 727 SYPLLVLL 734 (1006)
Q Consensus 727 ~~~L~~~~ 734 (1006)
||+|....
T Consensus 128 W~~L~~~~ 135 (141)
T 1v27_A 128 WYKLQTHD 135 (141)
T ss_dssp EEECBCCS
T ss_pred eEECcccc
Confidence 99997643
No 37
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.68 E-value=2.5e-16 Score=151.35 Aligned_cols=106 Identities=23% Similarity=0.277 Sum_probs=89.4
Q ss_pred CcEEEEEEEeeccCCccCccCCCCC-CCCCeEEEEEEC---CEEEEeecccCCCCCeeccEEEEE-EeC---CCcEEEEE
Q 042999 617 PVGILELGILGARGLLPMKTKNGGK-GSTDAYCVAKYG---KKWVRTRTITDCFDPRWNEQYTWQ-VYD---PCTVLTVG 688 (1006)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~~~~d~~~-g~sdpyv~v~~~---~~~~rT~~~~~~~nP~wne~~~~~-v~~---~~~~l~i~ 688 (1006)
..|.|.|+|++|+||++++. . |.+||||++.++ .+..||+++++++||+|||+|.|. +.. ....|.|+
T Consensus 20 ~~~~L~v~v~~a~~L~~~d~----~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~ 95 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAMDE----QSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFT 95 (138)
T ss_dssp GGTEEEEEEEEEESCCCCBT----TTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCC----CCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEE
Confidence 34789999999999998653 4 789999999995 478999999999999999999996 543 23589999
Q ss_pred EEECCCCCcCCCCCCCCceeEEEEEEcccccCCc-eEeeEEEeeee
Q 042999 689 VFDNWRMFADASEERPDYRIGKIRIRVSTLENNK-VYTTSYPLLVL 733 (1006)
Q Consensus 689 v~d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~-~~~~~~~L~~~ 733 (1006)
|||+|.++ +|++||.+.|+|.++..+. ....|++|...
T Consensus 96 V~d~d~~~-------~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~ 134 (138)
T 1ugk_A 96 ILSFDRFS-------RDDIIGEVLIPLSGIELSEGKMLMNREIISG 134 (138)
T ss_dssp EEEECSSC-------CCCCCEEEEEECTTCCCTTCCEEEEEECBSS
T ss_pred EEECCCCC-------CCcEEEEEEEehhHccCCCCcchhhhhhhcC
Confidence 99999887 8999999999999998754 33567988654
No 38
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.67 E-value=3.8e-17 Score=158.05 Aligned_cols=104 Identities=25% Similarity=0.360 Sum_probs=90.3
Q ss_pred EEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECCE--------------EEEeecccCCCCCeeccEEEEE-EeC---
Q 042999 619 GILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGKK--------------WVRTRTITDCFDPRWNEQYTWQ-VYD--- 680 (1006)
Q Consensus 619 g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~~--------------~~rT~~~~~~~nP~wne~~~~~-v~~--- 680 (1006)
|.|.|+|++|+||++++ . +|.+||||++.+++. ..||+++++++||+|||.|.|. +..
T Consensus 18 ~~L~V~v~~a~~L~~~d---~-~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l 93 (142)
T 1rh8_A 18 GNLIIHILQARNLVPRD---N-NGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQL 93 (142)
T ss_dssp TEEEEEEEEEESCCCCS---S-SSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHH
T ss_pred CEEEEEEEEecCCCCCC---C-CCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHc
Confidence 58999999999999865 4 789999999999752 4789999999999999999997 432
Q ss_pred CCcEEEEEEEECCCCCcCCCCCCCCceeEEEEEEcccccCCceEeeEEEeeee
Q 042999 681 PCTVLTVGVFDNWRMFADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLLVL 733 (1006)
Q Consensus 681 ~~~~l~i~v~d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 733 (1006)
....|.|+|||+|.++ +|++||.+.|+|.++..+.....||+|...
T Consensus 94 ~~~~l~i~V~d~d~~~-------~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~ 139 (142)
T 1rh8_A 94 MKKTLEVTVWDYDRFS-------SNDFLGEVLIDLSSTSHLDNTPRWYPLKEQ 139 (142)
T ss_dssp TTCEEEEEEEEECSSS-------CEEEEEEEEEETTSCGGGTTCCEEEECBCC
T ss_pred cCCEEEEEEEECCCCC-------CCceEEEEEEeccccccCCCCCeEEECCcc
Confidence 4568999999999987 899999999999999876666899999653
No 39
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.67 E-value=2.1e-16 Score=150.75 Aligned_cols=109 Identities=24% Similarity=0.433 Sum_probs=91.4
Q ss_pred cccEEEEEEEEecCCCCCCCCCCCCcEEEEEE-----CCeEEEeeCcCCCCCCeeeeEEEEE-eeCCCCCCCceEEEEEE
Q 042999 14 TVRKLVVEVVDARDLLPKDGQGSSSPYVIADF-----DGQRKRTSTKFRDLNPVWNEPLEFI-VSDPKNMDCEELEIEVY 87 (1006)
Q Consensus 14 ~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~-----~~~~~kT~~~~~t~nP~wne~f~f~-~~~~~~~~~~~L~i~V~ 87 (1006)
..+.|.|+|++|++|+. +..|.+||||++++ ...+++|+++++++||+|||+|.|. +... ++....|.|+||
T Consensus 18 ~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~-~l~~~~L~~~V~ 95 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKE-TLRQRELQLSVL 95 (134)
T ss_dssp ETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHH-HHTTCEEEEEEE
T ss_pred cCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHH-HhCcCEEEEEEE
Confidence 35789999999999987 76889999999999 3467999999999999999999999 6542 111568999999
Q ss_pred eCCCCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceecC
Q 042999 88 NDKRYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKKS 130 (1006)
Q Consensus 88 d~d~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~ 130 (1006)
|++.+ +++++||++.++++++ ..+.....|++|.+.+
T Consensus 96 d~d~~-----~~~~~lG~~~i~l~~l-~~~~~~~~W~~L~~~~ 132 (134)
T 2b3r_A 96 SAESL-----RENFFLGGITLPLKDF-NLSKETVKWYQLTAAT 132 (134)
T ss_dssp ECCSS-----SCCEEEEEEEEEGGGS-CTTSCEEEEEECBC--
T ss_pred ECCCC-----CCCcEEEEEEEEhhhc-cCCCCcceeEECCCcc
Confidence 99998 7899999999999996 4556667899998643
No 40
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.67 E-value=6.8e-16 Score=152.22 Aligned_cols=121 Identities=22% Similarity=0.239 Sum_probs=99.8
Q ss_pred cceeeeEEEEEeeeCCccccccccccCCCCCccccccCCCCcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECC--
Q 042999 577 RSYCGRIQLKLCLEGGYHVLDEAAHVCSDFRPTAKQLWKPPVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGK-- 654 (1006)
Q Consensus 577 ~~~~G~l~l~v~l~~~~~~~d~~~~~~~~~~p~~~~l~~~~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~-- 654 (1006)
....|+|++.+.... ..|.|.|+|++|+||++++ . +|.+||||++.+++
T Consensus 8 ~~~~G~l~~~l~y~~-------------------------~~~~L~V~v~~a~~L~~~d---~-~g~~dpyv~v~l~~~~ 58 (159)
T 1tjx_A 8 LEKLGDICFSLRYVP-------------------------TAGKLTVVILEAKNLKKMD---V-GGLSDPYVKIHLMQNG 58 (159)
T ss_dssp GGCCCEEEEEEEEET-------------------------TTTEEEEEEEEEESCCCCS---T-TSCCCEEEEEEEEETT
T ss_pred cCcCCeEEEEEEEcC-------------------------CCCEEEEEEEEeeCCCCcc---C-CCCCCeEEEEEEEeCC
Confidence 344799998875432 3579999999999999865 4 78999999999952
Q ss_pred ---EEEEeecccCCCCCeeccEEEEEEeCC---CcEEEEEEEECCCCCcCCCCCCCCceeEEEEEEcccc----------
Q 042999 655 ---KWVRTRTITDCFDPRWNEQYTWQVYDP---CTVLTVGVFDNWRMFADASEERPDYRIGKIRIRVSTL---------- 718 (1006)
Q Consensus 655 ---~~~rT~~~~~~~nP~wne~~~~~v~~~---~~~l~i~v~d~~~~~~~~~~~~~d~~lG~~~i~l~~l---------- 718 (1006)
...||+++++++||+|||+|.|.+... ...|.|+|||+|.++ +|++||.+.|++..+
T Consensus 59 ~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~-------~~~~iG~~~i~l~~~~~~~~~w~~l 131 (159)
T 1tjx_A 59 KRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIG-------KNDAIGKVFVGYNSTGAELRHWSDM 131 (159)
T ss_dssp EEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSS-------CCEEEEEEEEETTCCHHHHHHHHHH
T ss_pred ceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCCCC-------CCceEEEEEECCCCCCcHHHHHHHH
Confidence 467999999999999999999998653 358999999999987 899999999999853
Q ss_pred --cCCceEeeEEEeeee
Q 042999 719 --ENNKVYTTSYPLLVL 733 (1006)
Q Consensus 719 --~~~~~~~~~~~L~~~ 733 (1006)
..+.....||+|...
T Consensus 132 ~~~~~~~~~~W~~L~~~ 148 (159)
T 1tjx_A 132 LANPRRPIAQWHTLQVE 148 (159)
T ss_dssp HHSTTCCEEEEEECBCH
T ss_pred HHCCCCeeeeEEECcCc
Confidence 234567899999763
No 41
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.67 E-value=5.7e-16 Score=148.64 Aligned_cols=102 Identities=16% Similarity=0.087 Sum_probs=87.8
Q ss_pred CcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEEC---C-EEEEeecccCCCCCeeccEEEEEEeCC---CcEEEEEE
Q 042999 617 PVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYG---K-KWVRTRTITDCFDPRWNEQYTWQVYDP---CTVLTVGV 689 (1006)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~---~-~~~rT~~~~~~~nP~wne~~~~~v~~~---~~~l~i~v 689 (1006)
..+.|.|+|++|++ + |. +|.+||||++.+. + ...||+++++|+||+|||+|.|.+... ...|.|+|
T Consensus 24 ~~~~L~V~v~~a~~---~---d~-~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V 96 (138)
T 1wfm_A 24 QKAELFVTRLEAVT---S---NH-DGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTL 96 (138)
T ss_dssp TTTEEEEEEEEEEC---C---CC-SSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEE
T ss_pred CCCEEEEEEEEEEc---C---CC-CCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEE
Confidence 34689999999993 2 45 8899999999993 2 368999999999999999999998653 46899999
Q ss_pred EECCCCCcCCCCCCCCceeEEEEEEcccccCCceEeeEEEeee
Q 042999 690 FDNWRMFADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLLV 732 (1006)
Q Consensus 690 ~d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 732 (1006)
||+|.++ +|++||.+.|+|.++..+.....||+|..
T Consensus 97 ~d~d~~~-------~dd~lG~~~i~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 97 RTCDRFS-------RHSVAGELRLGLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp EECCSSC-------TTSCSEEEEEESSSSSSCTTCCEEEECCC
T ss_pred EECCCCC-------CCcEEEEEEEEcccccCcccccceeeCcC
Confidence 9999987 89999999999999976666689999975
No 42
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=2.1e-16 Score=152.73 Aligned_cols=121 Identities=20% Similarity=0.242 Sum_probs=99.6
Q ss_pred cceeeeEEEEEeeeCCccccccccccCCCCCccccccCCCCcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEEC---
Q 042999 577 RSYCGRIQLKLCLEGGYHVLDEAAHVCSDFRPTAKQLWKPPVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYG--- 653 (1006)
Q Consensus 577 ~~~~G~l~l~v~l~~~~~~~d~~~~~~~~~~p~~~~l~~~~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~--- 653 (1006)
....|+|++.+.... ..|.|.|+|++|+||++++ . .| +||||++.+.
T Consensus 7 ~~~~G~l~~~l~y~~-------------------------~~~~L~v~v~~a~~L~~~d---~-~g-~dpyv~v~l~~~~ 56 (142)
T 2dmg_A 7 GSPLGQIQLTIRHSS-------------------------QRNKLIVVVHACRNLIAFS---E-DG-SDPYVRMYLLPDK 56 (142)
T ss_dssp SCSSCEEEEEEEEET-------------------------TTTEEEEEEEEEECCCCSS---T-TC-CCEEEEEEEESCC
T ss_pred CCCcceEEEEEEEeC-------------------------CCCEEEEEEEEeECCCCCC---C-CC-CCeeEEEEEEcCC
Confidence 344699988875432 3478999999999999865 4 77 9999999993
Q ss_pred --CEEEEeecccCCCCCeeccEEEEEEeC---CCcEEEEEEEECCCCCcCCCCCCC-CceeEEEEEEcccccCCceEeeE
Q 042999 654 --KKWVRTRTITDCFDPRWNEQYTWQVYD---PCTVLTVGVFDNWRMFADASEERP-DYRIGKIRIRVSTLENNKVYTTS 727 (1006)
Q Consensus 654 --~~~~rT~~~~~~~nP~wne~~~~~v~~---~~~~l~i~v~d~~~~~~~~~~~~~-d~~lG~~~i~l~~l~~~~~~~~~ 727 (1006)
....||+++++++||+|||+|.|.+.. ....|.|+|||+|.++ .+ |++||.+.|+|.++..+.....|
T Consensus 57 ~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~------~~~~~~iG~~~i~l~~~~~~~~~~~W 130 (142)
T 2dmg_A 57 RRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFL------SKDKGLLGKVLVALASEELAKGWTQW 130 (142)
T ss_dssp CSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCCSS------CCSCCCCEEEEEECCCSTTTTCBCCB
T ss_pred CCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCCcc------ccCCcEEEEEEEecccccccccccce
Confidence 267899999999999999999999854 2358999999999875 12 57999999999999877677899
Q ss_pred EEeeee
Q 042999 728 YPLLVL 733 (1006)
Q Consensus 728 ~~L~~~ 733 (1006)
|+|...
T Consensus 131 ~~L~~~ 136 (142)
T 2dmg_A 131 YDLTED 136 (142)
T ss_dssp CCCBCS
T ss_pred eeccCC
Confidence 999764
No 43
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.66 E-value=2e-16 Score=150.24 Aligned_cols=106 Identities=25% Similarity=0.463 Sum_probs=86.8
Q ss_pred ccEEEEEEEEecCCCCCCCCCCCCcEEEEEE-----CCeEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeC
Q 042999 15 VRKLVVEVVDARDLLPKDGQGSSSPYVIADF-----DGQRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYND 89 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~-----~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~ 89 (1006)
.+.|.|+|++|++|+.++..|.+||||++++ +..+++|+++++++||+|||+|.|.+..........|.|+|||+
T Consensus 17 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~ 96 (129)
T 2bwq_A 17 GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQ 96 (129)
T ss_dssp TTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEEC
Confidence 5789999999999999998999999999999 35789999999999999999999995432222256899999999
Q ss_pred CCCCCCCCCC--CceeEEEEEeCeeeeeeCCceeEEEEce
Q 042999 90 KRYCNGSGRK--NHFLGRVKLCGSQFARRGDEGLVYFPLE 127 (1006)
Q Consensus 90 d~~~~~~~~~--d~~lG~~~v~l~~l~~~~~~~~~w~~L~ 127 (1006)
+.. ++ +++||++.+++.++...+ ..+||+|+
T Consensus 97 d~~-----~~~~~~~lG~~~i~l~~l~~~~--~~~W~~Lq 129 (129)
T 2bwq_A 97 ARV-----REEESEFLGEILIELETALLDD--EPHWYKLQ 129 (129)
T ss_dssp ------------CEEEEEEEEEGGGCCCSS--CEEEEECC
T ss_pred CcC-----cCcCCceeEEEEEEccccCCCc--CCccEECc
Confidence 998 55 999999999999975433 66899984
No 44
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=2.3e-16 Score=153.44 Aligned_cols=123 Identities=17% Similarity=0.147 Sum_probs=101.1
Q ss_pred ceeeeEEEEEeeeCCccccccccccCCCCCccccccCCCCcEEEEEEEeeccCCccC-ccC---CCCCCCCCeEEEEEEC
Q 042999 578 SYCGRIQLKLCLEGGYHVLDEAAHVCSDFRPTAKQLWKPPVGILELGILGARGLLPM-KTK---NGGKGSTDAYCVAKYG 653 (1006)
Q Consensus 578 ~~~G~l~l~v~l~~~~~~~d~~~~~~~~~~p~~~~l~~~~~g~L~v~v~~a~~L~~~-~~~---d~~~g~sdpyv~v~~~ 653 (1006)
...|+|++.+.... ..|.|.|+|++|+||++. +.. +. .|.+||||++.++
T Consensus 10 ~~~G~l~~~l~y~~-------------------------~~~~L~V~v~~a~~L~~~~d~~g~~~~-~~~~dpyv~v~l~ 63 (147)
T 2enp_A 10 YQLGMLHFSTQYDL-------------------------LHNHLTVRVIEARDLPPPISHDGSRQD-MAHSNPYVKICLL 63 (147)
T ss_dssp CCCCEEEEEEEEET-------------------------TTTEEEEEEEEEECCCCSCSSCCSSCT-TCCCCCEEEEEEE
T ss_pred CcceEEEEEEEEcC-------------------------CCCEEEEEEEEEeCCCCcccccccccc-CCCCCcEEEEEEE
Confidence 44799988876542 357999999999999983 421 22 4689999999995
Q ss_pred ---CEEEEeecccCCCCCeeccEEEEEEeC---CCcEEEEEEEECCCCCcCCCCCCCCceeEEEEEEcccccCCceEeeE
Q 042999 654 ---KKWVRTRTITDCFDPRWNEQYTWQVYD---PCTVLTVGVFDNWRMFADASEERPDYRIGKIRIRVSTLENNKVYTTS 727 (1006)
Q Consensus 654 ---~~~~rT~~~~~~~nP~wne~~~~~v~~---~~~~l~i~v~d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~ 727 (1006)
.+..||+++++++||+|||+|.|.+.. ....|.|+|||+|.++ +|++||.+.|+|.++..+.....|
T Consensus 64 ~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~-------~~~~iG~~~i~l~~l~~~~~~~~w 136 (147)
T 2enp_A 64 PDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKFS-------RHCVIGKVSVPLCEVDLVKGGHWW 136 (147)
T ss_dssp TCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEEECCSTTC-------CSCCCEEEEEETTTSCTTTCCCEE
T ss_pred eCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEEEECCCCc-------CCcEEEEEEEechhcCCCCCccEE
Confidence 467899999999999999999999864 2358999999999887 789999999999999876666789
Q ss_pred EEeeee
Q 042999 728 YPLLVL 733 (1006)
Q Consensus 728 ~~L~~~ 733 (1006)
|+|...
T Consensus 137 ~~L~~~ 142 (147)
T 2enp_A 137 KALIPS 142 (147)
T ss_dssp ECCBCC
T ss_pred EEeecC
Confidence 999754
No 45
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.66 E-value=5.6e-17 Score=158.36 Aligned_cols=107 Identities=16% Similarity=0.179 Sum_probs=92.1
Q ss_pred ccEEEEEEEEecCCCCCCCCCCCCcEEEEEECC------eEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEe
Q 042999 15 VRKLVVEVVDARDLLPKDGQGSSSPYVIADFDG------QRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYN 88 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~------~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d 88 (1006)
.+.|.|+|++|+||+++|..|.+||||++++.. .++||+++++|+||+|||+|.|.+.... +....|.|+|||
T Consensus 42 ~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~-l~~~~L~~~V~d 120 (155)
T 2z0u_A 42 NKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPA-LHQKTLRVDVCT 120 (155)
T ss_dssp TTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHH-HHHCEEEEEEEE
T ss_pred CCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHH-hCcCEEEEEEEE
Confidence 578999999999999999999999999999964 2699999999999999999999976521 114579999999
Q ss_pred CCCCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEce
Q 042999 89 DKRYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLE 127 (1006)
Q Consensus 89 ~d~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~ 127 (1006)
+|.+ +++++||++.++++++...+....+|++|.
T Consensus 121 ~d~~-----~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 121 TDRS-----HLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp ECTT-----SCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred CCCC-----CCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 9999 799999999999999643355667899985
No 46
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.66 E-value=3e-16 Score=151.64 Aligned_cols=104 Identities=25% Similarity=0.373 Sum_probs=91.0
Q ss_pred CcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECC-----EEEEeecccCCCCCeeccEEEEE-EeCC---CcEEEE
Q 042999 617 PVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGK-----KWVRTRTITDCFDPRWNEQYTWQ-VYDP---CTVLTV 687 (1006)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~-----~~~rT~~~~~~~nP~wne~~~~~-v~~~---~~~l~i 687 (1006)
..|.|.|+|++|+||++++ . +|.+||||++.+++ ...||+++++++||+|||.|.|. +... ...|.|
T Consensus 27 ~~~~L~V~v~~a~~L~~~d---~-~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i 102 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPMD---S-NGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRI 102 (142)
T ss_dssp GGTEEEEEEEEEESCCCCC---T-TSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEE
T ss_pred CCCEEEEEEEEecCCCCCC---C-CCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEE
Confidence 3579999999999999864 4 78999999999965 78999999999999999999998 4332 368999
Q ss_pred EEEECCCCCcCCCCCCCCceeEEEEEEcccccCCceEeeEEEee
Q 042999 688 GVFDNWRMFADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLL 731 (1006)
Q Consensus 688 ~v~d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~ 731 (1006)
+|||+|.++ +|++||.+.|+|.++..+.....|++|.
T Consensus 103 ~V~d~d~~~-------~d~~iG~~~i~l~~l~~~~~~~~~~~L~ 139 (142)
T 2chd_A 103 SVCDEDKFG-------HNEFIGETRFSLKKLKANQRKNFNICLE 139 (142)
T ss_dssp EEEEECTTS-------CEEEEEEEEEEGGGCCTTCCEEEEEECB
T ss_pred EEEECCCCC-------CCcEEEEEEEEHHHcCCCCccEEEEecc
Confidence 999999887 7899999999999999888777888884
No 47
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.66 E-value=5.4e-16 Score=149.13 Aligned_cols=102 Identities=20% Similarity=0.249 Sum_probs=85.1
Q ss_pred CcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECC-----EEEEeecccCCCCCeeccEEEEEEeCCC---cEEEEE
Q 042999 617 PVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGK-----KWVRTRTITDCFDPRWNEQYTWQVYDPC---TVLTVG 688 (1006)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~-----~~~rT~~~~~~~nP~wne~~~~~v~~~~---~~l~i~ 688 (1006)
..|.|.|+|++|+||++++ . +|.+||||++.+++ ...+|+++++++||.|||+|.|.+.... ..|.|+
T Consensus 14 ~~~~L~v~v~~a~~L~~~d---~-~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~ 89 (138)
T 3n5a_A 14 SANSIIVNIIKARNLKAMD---I-GGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIIT 89 (138)
T ss_dssp TTTEEEEEEEEEESCCCCB---T-TTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEE
T ss_pred CCCeEEEEEEEeeCCCCcC---C-CCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEE
Confidence 3579999999999999865 4 78999999999963 4789999999999999999999987644 589999
Q ss_pred EEECCCCCcCCCCCCCCceeEEEEEEcccccCCceEeeEEEee
Q 042999 689 VFDNWRMFADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLL 731 (1006)
Q Consensus 689 v~d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~ 731 (1006)
|||+|.++ +|++||.+.|++.++..+. ++|++|.
T Consensus 90 V~d~~~~~-------~~~~lG~~~i~l~~~~~~~--~~W~~l~ 123 (138)
T 3n5a_A 90 VMDKDKLS-------RNDVIGKIYLSWKSGPGEV--KHWKDMI 123 (138)
T ss_dssp EEECCSSS-------CCEEEEEEEESSSSCHHHH--HHHHHHH
T ss_pred EEECCCCC-------CCcEEEEEEEccccCChHH--HHHHHHH
Confidence 99999887 8999999999999764322 4455443
No 48
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.66 E-value=2.6e-16 Score=153.44 Aligned_cols=103 Identities=24% Similarity=0.375 Sum_probs=91.2
Q ss_pred EEEEEEEeeccCCccCccCCCCCCCCCeEEEEEEC-----CEEEEeecccCCCCCeeccEEEEEEeCC--CcEEEEEEEE
Q 042999 619 GILELGILGARGLLPMKTKNGGKGSTDAYCVAKYG-----KKWVRTRTITDCFDPRWNEQYTWQVYDP--CTVLTVGVFD 691 (1006)
Q Consensus 619 g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~-----~~~~rT~~~~~~~nP~wne~~~~~v~~~--~~~l~i~v~d 691 (1006)
|.|.|+|++|++|++++ . .|.+||||++.++ ....||+++++++||+|||+|.|.+... ...|.|+|||
T Consensus 31 ~~L~v~v~~a~~L~~~d---~-~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d 106 (149)
T 1a25_A 31 EVLIVVVRDAKNLVPMD---P-NGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWD 106 (149)
T ss_dssp SEEEEEEEEEESCCCCS---T-TSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEE
T ss_pred CEEEEEEEEeeCCCCCC---C-CCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEE
Confidence 57999999999999865 4 7889999999996 4688999999999999999999999763 4689999999
Q ss_pred CCCCCcCCCCCCCCceeEEEEEEcccccCCceEeeEEEeeee
Q 042999 692 NWRMFADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLLVL 733 (1006)
Q Consensus 692 ~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 733 (1006)
+|.++ +|++||.+.|+|.++..+ ..+.||+|...
T Consensus 107 ~d~~~-------~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~ 140 (149)
T 1a25_A 107 WDLTS-------RNDFMGSLSFGISELQKA-GVDGWFKLLSQ 140 (149)
T ss_dssp CCSSS-------CCEEEEEEEEEHHHHTTC-CEEEEEECBCH
T ss_pred CCCCC-------CCCEEEEEEEEHHHhCcC-ccCCeEEccCC
Confidence 99987 899999999999999876 46899999764
No 49
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.66 E-value=1.6e-16 Score=158.49 Aligned_cols=106 Identities=23% Similarity=0.262 Sum_probs=92.6
Q ss_pred EEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECC-----EEEEeecccCCCCCeeccEEEEEEeCCCcEEEEEEE-EC
Q 042999 619 GILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGK-----KWVRTRTITDCFDPRWNEQYTWQVYDPCTVLTVGVF-DN 692 (1006)
Q Consensus 619 g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~-----~~~rT~~~~~~~nP~wne~~~~~v~~~~~~l~i~v~-d~ 692 (1006)
|.|.|+|++|+||+++|. . +|.+||||++.+++ ...||+++++|+||+|||+|.|.+......|.|+|| |+
T Consensus 30 ~~L~V~v~~a~~L~~~d~--~-~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~ 106 (171)
T 2q3x_A 30 GQLEVEVIRARSLTQKPG--S-KSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDY 106 (171)
T ss_dssp TEEEEEEEEEESCCCCC------CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCCCc--C-CCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcC
Confidence 689999999999998652 2 57899999999852 378999999999999999999999777789999999 99
Q ss_pred CCCCcCCCCCCCCceeEEEEEEcccccCCceEeeEEEeeeec
Q 042999 693 WRMFADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLLVLL 734 (1006)
Q Consensus 693 ~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~ 734 (1006)
|.++ +|++||.+.|+|.++..+.....||+|....
T Consensus 107 d~~~-------~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 141 (171)
T 2q3x_A 107 GRMD-------HKCFMGVAQILLEELDLSSMVIGWYKLFPPS 141 (171)
T ss_dssp STTC-------SSEEEEEEEECGGGSCTTSCEEEEEECBCGG
T ss_pred CCCC-------CCCEEEEEEEEHHHcccCCCcceeEECCCcc
Confidence 9887 8999999999999998777889999997643
No 50
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=2.7e-16 Score=151.77 Aligned_cols=110 Identities=24% Similarity=0.326 Sum_probs=93.7
Q ss_pred ccEEEEEEEEecCCCCCCCCCCCCcEEEEEEC---CeEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeCCC
Q 042999 15 VRKLVVEVVDARDLLPKDGQGSSSPYVIADFD---GQRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYNDKR 91 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~---~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~d~ 91 (1006)
.+.|.|+|++|++|+.++..|.+||||++++. .++++|+++++++||+|||+|.|.+..........|.|+|||++.
T Consensus 25 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~ 104 (141)
T 2d8k_A 25 ESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDR 104 (141)
T ss_dssp SCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCS
T ss_pred CCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCC
Confidence 56899999999999999988999999999994 467999999999999999999998533211124689999999999
Q ss_pred CCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceecC
Q 042999 92 YCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKKS 130 (1006)
Q Consensus 92 ~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~ 130 (1006)
+ +++++||++.+++.++ ..+.....|++|.+.+
T Consensus 105 ~-----~~~~~iG~~~i~l~~l-~~~~~~~~W~~L~~~~ 137 (141)
T 2d8k_A 105 F-----SRNDPIGEVSIPLNKV-DLTQMQTFWKDLKPSG 137 (141)
T ss_dssp S-----SSCEEEEEEEEETTTS-CTTSCEEEEECCEECC
T ss_pred C-----CCCcEEEEEEEEhhhh-cCCCCccEEEECcCCC
Confidence 8 7899999999999996 4455667899999765
No 51
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.65 E-value=1e-15 Score=152.13 Aligned_cols=92 Identities=20% Similarity=0.276 Sum_probs=81.5
Q ss_pred CcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECC-----EEEEeecccCCCCCeeccEEEEEEeCC---CcEEEEE
Q 042999 617 PVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGK-----KWVRTRTITDCFDPRWNEQYTWQVYDP---CTVLTVG 688 (1006)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~-----~~~rT~~~~~~~nP~wne~~~~~v~~~---~~~l~i~ 688 (1006)
..|.|.|+|++|+||++++ . +|.+||||++.+++ ...||+++++++||+|||+|.|.+... ...|.|+
T Consensus 35 ~~~~L~V~v~~a~~L~~~d---~-~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~ 110 (166)
T 2cm5_A 35 QQGGLIVGIIRCVHLAAMD---A-NGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDIS 110 (166)
T ss_dssp TTTEEEEEEEEEESCCCCS---T-TSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEE
T ss_pred CCCEEEEEEEEeECCCCcc---C-CCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEE
Confidence 3579999999999999865 4 78999999999965 688999999999999999999998652 4589999
Q ss_pred EEECCCCCcCCCCCCCCceeEEEEEEccccc
Q 042999 689 VFDNWRMFADASEERPDYRIGKIRIRVSTLE 719 (1006)
Q Consensus 689 v~d~~~~~~~~~~~~~d~~lG~~~i~l~~l~ 719 (1006)
|||+|.++ +|++||.+.|+|.++.
T Consensus 111 V~d~d~~~-------~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 111 VWDYDIGK-------SNDYIGGCQLGISAKG 134 (166)
T ss_dssp EEECCSSS-------CCEEEEEEEEETTCCH
T ss_pred EEECCCCC-------CCcEEEeEEEecccCC
Confidence 99999987 8999999999999863
No 52
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.64 E-value=3e-16 Score=152.75 Aligned_cols=111 Identities=24% Similarity=0.418 Sum_probs=93.1
Q ss_pred ccEEEEEEEEecCCCCCC-CCCCCCcEEEEEEC-----CeEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEe
Q 042999 15 VRKLVVEVVDARDLLPKD-GQGSSSPYVIADFD-----GQRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYN 88 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~~-~~g~~dPyv~v~~~-----~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d 88 (1006)
.+.|.|+|++|++|+.++ ..|.+||||++.+. ..+++|+++++++||+|||+|.|.+.... .....|.|+|||
T Consensus 22 ~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~~~~~L~~~V~d 100 (148)
T 3fdw_A 22 TQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESL-LAQRTLQFSVWH 100 (148)
T ss_dssp TTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTT-GGGCEEEEEEEE
T ss_pred CCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhH-hCceEEEEEEEE
Confidence 578999999999999888 57899999999996 34799999999999999999999987642 225679999999
Q ss_pred CCCCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceecCCc
Q 042999 89 DKRYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKKSVF 132 (1006)
Q Consensus 89 ~d~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~~~ 132 (1006)
++.+ +++++||++.+++.++ ..+....+|++|.+++..
T Consensus 101 ~d~~-----~~~~~iG~~~i~l~~l-~~~~~~~~W~~L~~~~~~ 138 (148)
T 3fdw_A 101 HGRF-----GRNTFLGEAEIQMDSW-KLDKKLDHCLPLHGKISA 138 (148)
T ss_dssp ECGG-----GCEEEEEEEEEEHHHH-HHHCCSEEEEECBCC---
T ss_pred CCCC-----cCCcEEEEEEEEcccc-cccCCccceEECcCcccc
Confidence 9998 7899999999999996 444455689999876543
No 53
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.64 E-value=6.9e-16 Score=150.89 Aligned_cols=107 Identities=26% Similarity=0.391 Sum_probs=92.9
Q ss_pred ccEEEEEEEEecCCCCCCCCCCCCcEEEEEEC---CeEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeCCC
Q 042999 15 VRKLVVEVVDARDLLPKDGQGSSSPYVIADFD---GQRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYNDKR 91 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~---~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~d~ 91 (1006)
.+.|.|+|++|++|+.++..|.+||||++++. .++++|+++++++||+|||+|.|.+.... +....|.|+|||++.
T Consensus 41 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-l~~~~L~i~V~d~d~ 119 (152)
T 1rsy_A 41 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSE-LGGKTLVMAVYDFDR 119 (152)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHH-HTTCEEEEEEEECCS
T ss_pred CCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHH-cCCCEEEEEEEECCC
Confidence 46899999999999999988999999999993 56799999999999999999999876421 114689999999999
Q ss_pred CCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEcee
Q 042999 92 YCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEK 128 (1006)
Q Consensus 92 ~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~ 128 (1006)
+ +++++||++.+++.++ ..+....+|++|.+
T Consensus 120 ~-----~~~~~iG~~~i~l~~l-~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 120 F-----SKHDIIGEFKVPMNTV-DFGHVTEEWRDLQS 150 (152)
T ss_dssp S-----SCCEEEEEEEEEGGGC-CCSSCEEEEEECBC
T ss_pred C-----CCCcEEEEEEEEchhc-cCCCCcceEEECCC
Confidence 8 7899999999999996 55666779999975
No 54
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.63 E-value=2.7e-15 Score=138.55 Aligned_cols=127 Identities=16% Similarity=0.178 Sum_probs=106.0
Q ss_pred CCCCcccEEEEEEEEecCCCCCCCCCCCCcEEEEEECCeEEEeeCcC-CCCCCeeeeEEEEEeeCCCCCCCceEEEEEEe
Q 042999 10 QQQFTVRKLVVEVVDARDLLPKDGQGSSSPYVIADFDGQRKRTSTKF-RDLNPVWNEPLEFIVSDPKNMDCEELEIEVYN 88 (1006)
Q Consensus 10 ~~~~~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~~~~kT~~~~-~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d 88 (1006)
-|.+..+.|+|+|.+|.+|+ |++|||+++.+.+.+++|++++ +++||+|||.|+|++..+. ..+..|.|.|||
T Consensus 15 ~~~~~~msL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~l-d~~e~L~v~V~d 88 (144)
T 3l9b_A 15 VPRGSHMALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSI-DRNEVLEIQIFN 88 (144)
T ss_dssp ----CCEEEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCC-CTTCEEEEEEEE
T ss_pred ccCCCcEEEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCC-CCCCEEEEEEEE
Confidence 36778899999999999997 5899999999999999999998 6999999999999998854 348899999999
Q ss_pred CCCCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceecCCceeeeEEEEEEEEEEecC
Q 042999 89 DKRYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKKSVFSWIRGEIGLRIYYYDEL 149 (1006)
Q Consensus 89 ~d~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~~~~ 149 (1006)
++++ +++++||++.++|+++...+ ....+.+|.+.+... ..++|.+++.|.+..
T Consensus 89 ~~~v-----~~nrlIG~~~i~Lq~lv~~~-~l~l~~~LvD~n~~~-~~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 89 YSKV-----FSNKLIGTFRMVLQKVVEEN-RVEVSDTLIDDNNAI-IKTSLSMEVRYQAAD 142 (144)
T ss_dssp ECTT-----SCCEEEEEEEEESHHHHHHS-EEEEEEEEECTTSCE-EEEEEEEEEEEEETT
T ss_pred Cccc-----cCCCEEEEEEEEhHHhccCC-eEEEeecccCCCCCc-cccEEEEEEEecCCC
Confidence 9999 79999999999999976554 333466777655433 458999999999865
No 55
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.63 E-value=4.9e-16 Score=150.35 Aligned_cols=108 Identities=26% Similarity=0.401 Sum_probs=93.8
Q ss_pred cccEEEEEEEEecCCCCCCCCCCCCcEEEEEE---CCeEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeCC
Q 042999 14 TVRKLVVEVVDARDLLPKDGQGSSSPYVIADF---DGQRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYNDK 90 (1006)
Q Consensus 14 ~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~---~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~d 90 (1006)
..+.|.|+|++|++|+.++..+.+||||++++ +.++++|+++++++||+|||+|.|.+.... +....|.|+|||++
T Consensus 32 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-l~~~~L~i~V~d~d 110 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSE-LGGKTLVMAVYDFD 110 (143)
T ss_dssp TTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHH-HTTCEEEEEEEECC
T ss_pred CCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhh-cCCCEEEEEEEeCC
Confidence 45789999999999999998899999999999 456799999999999999999999976531 11468999999999
Q ss_pred CCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEcee
Q 042999 91 RYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEK 128 (1006)
Q Consensus 91 ~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~ 128 (1006)
.+ +++++||++.+++.++ ..+.....|++|++
T Consensus 111 ~~-----~~~~~iG~~~i~l~~l-~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 111 RF-----SKHDIIGEFKVPMNTV-DFGHVTEEWRDLQS 142 (143)
T ss_dssp SS-----SCCEEEEEEEEEGGGC-CTTSCEEEEEECBC
T ss_pred CC-----CCCceEEEEEEEHHHc-cCCCCcceEEECcC
Confidence 98 7899999999999996 56666779999974
No 56
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.63 E-value=1.3e-15 Score=146.37 Aligned_cols=111 Identities=19% Similarity=0.303 Sum_probs=92.5
Q ss_pred cccEEEEEEEEecCCCCCCCC-CCCCcEEEEEEC---CeEEEeeCcCCCCCCeeeeEEEEE-eeCCCCCCCceEEEEEEe
Q 042999 14 TVRKLVVEVVDARDLLPKDGQ-GSSSPYVIADFD---GQRKRTSTKFRDLNPVWNEPLEFI-VSDPKNMDCEELEIEVYN 88 (1006)
Q Consensus 14 ~~~~L~V~v~~a~~L~~~~~~-g~~dPyv~v~~~---~~~~kT~~~~~t~nP~wne~f~f~-~~~~~~~~~~~L~i~V~d 88 (1006)
..+.|.|+|++|++|+.++.. |.+||||++++. .++++|+++++++||+|||+|.|. +... ......|.|+|||
T Consensus 20 ~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~-~~~~~~l~i~V~d 98 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYT-QIQELALHFTILS 98 (138)
T ss_dssp GGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCST-TGGGCEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHH-HhccCEEEEEEEE
Confidence 357899999999999999984 899999999995 378999999999999999999996 5542 2235689999999
Q ss_pred CCCCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceecC
Q 042999 89 DKRYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKKS 130 (1006)
Q Consensus 89 ~d~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~ 130 (1006)
++.+ +++++||++.+++.++.........|++|.++.
T Consensus 99 ~d~~-----~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~~ 135 (138)
T 1ugk_A 99 FDRF-----SRDDIIGEVLIPLSGIELSEGKMLMNREIISGP 135 (138)
T ss_dssp ECSS-----CCCCCCEEEEEECTTCCCTTCCEEEEEECBSSS
T ss_pred CCCC-----CCCcEEEEEEEehhHccCCCCcchhhhhhhcCC
Confidence 9998 789999999999999744334445678998654
No 57
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.63 E-value=8.3e-16 Score=145.52 Aligned_cols=117 Identities=20% Similarity=0.247 Sum_probs=87.6
Q ss_pred cEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECCEEEEeeccc-CCCCCeeccEEEEEEeCCCcEEEEEEEECCCCC
Q 042999 618 VGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGKKWVRTRTIT-DCFDPRWNEQYTWQVYDPCTVLTVGVFDNWRMF 696 (1006)
Q Consensus 618 ~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~~~~rT~~~~-~~~nP~wne~~~~~v~~~~~~l~i~v~d~~~~~ 696 (1006)
.|.|.|+|++|++|++ .|++||||++. .+..+|++++ +++||+|||+|.|.+.+....|.|+|||+| ++
T Consensus 4 ~~~L~V~V~~A~~l~~-------~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~ 73 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA-------QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LI 73 (131)
T ss_dssp CEEEEEEEEEEECSSC-------GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SS
T ss_pred ceEEEEEEEEeECCCC-------CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CC
Confidence 5899999999998843 67899999999 3345677666 699999999999999988889999999999 76
Q ss_pred cCCCCCCCCceeEEEEEEcccccCCce--EeeEEEeeee----c--cCCc--ccccEEEEEEEEe
Q 042999 697 ADASEERPDYRIGKIRIRVSTLENNKV--YTTSYPLLVL----L--RTGL--KKMGEIELAVRFV 751 (1006)
Q Consensus 697 ~~~~~~~~d~~lG~~~i~l~~l~~~~~--~~~~~~L~~~----~--~~g~--~~~G~l~l~~~~~ 751 (1006)
+|++||++.|+|.++..... ...|+++... . ..|. ...+.+.+.++|.
T Consensus 74 -------~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~~ 131 (131)
T 2cjt_A 74 -------WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 131 (131)
T ss_dssp -------CEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEEC
T ss_pred -------CCCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEeC
Confidence 79999999999999864321 1145544431 1 1121 1236688888873
No 58
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.63 E-value=4.9e-16 Score=150.00 Aligned_cols=109 Identities=24% Similarity=0.454 Sum_probs=92.5
Q ss_pred ccEEEEEEEEecCCCCCCCCCCCCcEEEEEE-----CCeEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeC
Q 042999 15 VRKLVVEVVDARDLLPKDGQGSSSPYVIADF-----DGQRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYND 89 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~-----~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~ 89 (1006)
.+.|.|+|++|++|+.++..|.+||||++++ +.++++|+++++++||+|||+|.|.+..........|.|+|||+
T Consensus 20 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 99 (141)
T 1v27_A 20 GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQ 99 (141)
T ss_dssp TTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEB
T ss_pred CCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEEC
Confidence 4789999999999999998999999999999 35679999999999999999999995432322357899999999
Q ss_pred CCCCCCCCCC--CceeEEEEEeCeeeeeeCCceeEEEEceecC
Q 042999 90 KRYCNGSGRK--NHFLGRVKLCGSQFARRGDEGLVYFPLEKKS 130 (1006)
Q Consensus 90 d~~~~~~~~~--d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~ 130 (1006)
+.+ ++ +++||++.+++.++...+ ..+||+|.+..
T Consensus 100 d~~-----~~~~~~~lG~~~i~l~~l~~~~--~~~W~~L~~~~ 135 (141)
T 1v27_A 100 ARV-----REEESEFLGEILIELETALLDD--EPHWYKLQTHD 135 (141)
T ss_dssp CSS-----SSCCBCCCEEEEEEGGGCCCSS--EEEEEECBCCS
T ss_pred CCC-----cCCCCceEEEEEEEccccCCCC--CCceEECcccc
Confidence 998 55 999999999999975432 67899998654
No 59
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.63 E-value=1e-15 Score=146.94 Aligned_cols=106 Identities=29% Similarity=0.518 Sum_probs=92.6
Q ss_pred ccEEEEEEEEecCCCCCCCCCCCCcEEEEEE-----CCeEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeC
Q 042999 15 VRKLVVEVVDARDLLPKDGQGSSSPYVIADF-----DGQRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYND 89 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~-----~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~ 89 (1006)
.+.|.|+|++|++|+.++..|.+||||++.+ +..+++|+++++++||+|||+|.|.+..... ...|.|+|||+
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~--~~~l~i~v~d~ 92 (137)
T 3rdl_A 15 DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDK--DRRLSVEIWDW 92 (137)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGG--GCEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhc--CCEEEEEEEEC
Confidence 5789999999999999998999999999999 4567999999999999999999999875321 45799999999
Q ss_pred CCCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceec
Q 042999 90 KRYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKK 129 (1006)
Q Consensus 90 d~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~ 129 (1006)
+.. +++++||++.++++++...+ ..+|++|.+.
T Consensus 93 d~~-----~~~~~iG~~~i~l~~l~~~~--~~~W~~L~~~ 125 (137)
T 3rdl_A 93 DRT-----TRNDFMGSLSFGVSELMKMP--ASGWYKLLNQ 125 (137)
T ss_dssp CSS-----SCCEEEEEEEEEHHHHHHSC--EEEEEECBCH
T ss_pred CCC-----CCCceEEEEEEeHHHhccCc--cCceEECcCc
Confidence 998 78999999999999974433 6789999854
No 60
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.62 E-value=1.7e-15 Score=148.17 Aligned_cols=108 Identities=19% Similarity=0.300 Sum_probs=90.9
Q ss_pred ccEEEEEEEEecCCCCCCCCCCCCcEEEEEEC-----CeEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeC
Q 042999 15 VRKLVVEVVDARDLLPKDGQGSSSPYVIADFD-----GQRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYND 89 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~-----~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~ 89 (1006)
.+.|.|+|++|++|+.++ .|.+||||++.+. ..+++|+++++++||+|||+|.|.+.... . ...|.|+|||+
T Consensus 26 ~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~-~~~L~i~V~d~ 102 (153)
T 3fbk_A 26 DRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEED-D-QKRLLVTVWNR 102 (153)
T ss_dssp SSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGG-T-TSEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHH-h-CCEEEEEEEeC
Confidence 578999999999999998 6899999999993 35699999999999999999999985422 2 34699999999
Q ss_pred CCCCCCCCCC-CceeEEEEEeCeeeeeeCCceeEEEEceecC
Q 042999 90 KRYCNGSGRK-NHFLGRVKLCGSQFARRGDEGLVYFPLEKKS 130 (1006)
Q Consensus 90 d~~~~~~~~~-d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~ 130 (1006)
+.+ ++ |++||++.+++.++...+.....|++|.+..
T Consensus 103 d~~-----~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 103 ASQ-----SRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEH 139 (153)
T ss_dssp CSS-----GGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTT
T ss_pred CCC-----CCCCcEEEEEEEEHHHhcCCCCccccEEECCChh
Confidence 998 56 8999999999999754456677899998644
No 61
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.62 E-value=1.5e-15 Score=148.00 Aligned_cols=106 Identities=28% Similarity=0.460 Sum_probs=91.9
Q ss_pred ccEEEEEEEEecCCCCCCCCCCCCcEEEEEEC-----CeEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeC
Q 042999 15 VRKLVVEVVDARDLLPKDGQGSSSPYVIADFD-----GQRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYND 89 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~-----~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~ 89 (1006)
.+.|.|+|++|++|+.++..|.+||||++++. ..+++|+++++++||+|||+|.|.+.... . ...|.|+|||+
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~-~~~L~i~V~d~ 107 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESD-K-DRRLSVEIWDW 107 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGG-G-GCEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEecccc-C-CCEEEEEEEEC
Confidence 36799999999999999988999999999996 46799999999999999999999987632 1 45899999999
Q ss_pred CCCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceec
Q 042999 90 KRYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKK 129 (1006)
Q Consensus 90 d~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~ 129 (1006)
+.+ +++++||++.+++.++... ....||+|.+.
T Consensus 108 d~~-----~~~~~iG~~~i~l~~l~~~--~~~~W~~L~~~ 140 (149)
T 1a25_A 108 DLT-----SRNDFMGSLSFGISELQKA--GVDGWFKLLSQ 140 (149)
T ss_dssp CSS-----SCCEEEEEEEEEHHHHTTC--CEEEEEECBCH
T ss_pred CCC-----CCCCEEEEEEEEHHHhCcC--ccCCeEEccCC
Confidence 998 7899999999999997432 36689999864
No 62
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.62 E-value=2.8e-15 Score=146.75 Aligned_cols=103 Identities=17% Similarity=0.122 Sum_probs=81.3
Q ss_pred CcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEE--CCE---EEEeecccCCCCCeeccEEEEEEeCC---CcEEEEE
Q 042999 617 PVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKY--GKK---WVRTRTITDCFDPRWNEQYTWQVYDP---CTVLTVG 688 (1006)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~--~~~---~~rT~~~~~~~nP~wne~~~~~v~~~---~~~l~i~ 688 (1006)
..|.|.|+|++|+||++++ . +|++||||++.+ ++. ..||+++++++||+|||+|.|.+... ...|.|+
T Consensus 28 ~~~~L~v~v~~a~~L~~~d---~-~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~ 103 (153)
T 1w15_A 28 TTNTLTVVVLKARHLPKSD---V-SGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFL 103 (153)
T ss_dssp TTTEEEEEEEEEESCC----------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEE
T ss_pred CCCEEEEEEEEeECCCCcC---C-CCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEE
Confidence 3479999999999999864 4 788999999999 443 67999999999999999999998764 3689999
Q ss_pred EEECCCCCcCCCCCCCCceeEEEEEEcccccCCceEeeEEEeee
Q 042999 689 VFDNWRMFADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLLV 732 (1006)
Q Consensus 689 v~d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 732 (1006)
|||+|.++ +|++||.+.|++... +..+++||+|..
T Consensus 104 V~d~d~~~-------~~~~lG~~~i~l~~~--~~~~~~W~~l~~ 138 (153)
T 1w15_A 104 VLDSERGS-------RNEVIGRLVLGATAE--GSGGGHWKEICD 138 (153)
T ss_dssp EEECCTTS-------CCEEEEEEEESTTCC--SHHHHHHHHHHH
T ss_pred EEeCCCCC-------CCcEEEEEEECCCCC--chHHHHHHHHHh
Confidence 99999887 899999999999883 233355666543
No 63
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.61 E-value=2.5e-15 Score=144.18 Aligned_cols=107 Identities=18% Similarity=0.275 Sum_probs=90.2
Q ss_pred cccEEEEEEEEecCCCCCCCCCCCCcEEEEEEC---C-eEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeC
Q 042999 14 TVRKLVVEVVDARDLLPKDGQGSSSPYVIADFD---G-QRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYND 89 (1006)
Q Consensus 14 ~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~---~-~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~ 89 (1006)
..+.|.|+|++|++ ++..|.+||||++.+. + .+++|+++++++||+|||+|.|.+... ++....|.|+|||+
T Consensus 24 ~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~-~l~~~~L~~~V~d~ 99 (138)
T 1wfm_A 24 QKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEE-ELPTATLTLTLRTC 99 (138)
T ss_dssp TTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTT-SSTTCEEEEEEEEC
T ss_pred CCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHH-HcCCCEEEEEEEEC
Confidence 35789999999993 6778999999999993 2 358999999999999999999998764 23356899999999
Q ss_pred CCCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceecC
Q 042999 90 KRYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKKS 130 (1006)
Q Consensus 90 d~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~ 130 (1006)
|.+ ++|++||++.++|.++ ..+....+|++|.+..
T Consensus 100 d~~-----~~dd~lG~~~i~l~~l-~~~~~~~~W~~L~~~~ 134 (138)
T 1wfm_A 100 DRF-----SRHSVAGELRLGLDGT-SVPLGAAQWGELKTSG 134 (138)
T ss_dssp CSS-----CTTSCSEEEEEESSSS-SSCTTCCEEEECCCCS
T ss_pred CCC-----CCCcEEEEEEEEcccc-cCcccccceeeCcCCC
Confidence 999 7999999999999996 4455667899998753
No 64
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.61 E-value=2.8e-16 Score=151.95 Aligned_cols=109 Identities=28% Similarity=0.545 Sum_probs=91.9
Q ss_pred ccEEEEEEEEecCCCCCCCCCCCCcEEEEEECCe--------------EEEeeCcCCCCCCeeeeEEEEE-eeCCCCCCC
Q 042999 15 VRKLVVEVVDARDLLPKDGQGSSSPYVIADFDGQ--------------RKRTSTKFRDLNPVWNEPLEFI-VSDPKNMDC 79 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~~--------------~~kT~~~~~t~nP~wne~f~f~-~~~~~~~~~ 79 (1006)
.+.|.|+|++|++|+.++..|.+||||++++.+. +++|+++++++||+|||+|.|. +... ++..
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~-~l~~ 95 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISME-QLMK 95 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHH-HHTT
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHH-HccC
Confidence 3679999999999999998999999999999752 4899999999999999999997 4431 1125
Q ss_pred ceEEEEEEeCCCCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceecC
Q 042999 80 EELEIEVYNDKRYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKKS 130 (1006)
Q Consensus 80 ~~L~i~V~d~d~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~ 130 (1006)
..|.|+|||++.+ +++++||++.+++.++ ..+.....|++|.+.+
T Consensus 96 ~~l~i~V~d~d~~-----~~~~~lG~~~i~l~~l-~~~~~~~~W~~L~~~~ 140 (142)
T 1rh8_A 96 KTLEVTVWDYDRF-----SSNDFLGEVLIDLSST-SHLDNTPRWYPLKEQT 140 (142)
T ss_dssp CEEEEEEEEECSS-----SCEEEEEEEEEETTSC-GGGTTCCEEEECBCCC
T ss_pred CEEEEEEEECCCC-----CCCceEEEEEEecccc-ccCCCCCeEEECCccC
Confidence 6899999999998 7899999999999996 4445567899998754
No 65
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.61 E-value=1.4e-15 Score=151.62 Aligned_cols=106 Identities=25% Similarity=0.374 Sum_probs=91.4
Q ss_pred ccEEEEEEEEecCCCCCCC-CCCCCcEEEEEECC-----eEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEE-
Q 042999 15 VRKLVVEVVDARDLLPKDG-QGSSSPYVIADFDG-----QRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVY- 87 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~~~-~g~~dPyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~- 87 (1006)
.+.|.|+|++|++|+.+|. .|.+||||++++.. .+++|+++++++||+|||+|.|.+... ...|.|+||
T Consensus 29 ~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~----~~~L~~~V~~ 104 (171)
T 2q3x_A 29 KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQ----GKVLQVIVWG 104 (171)
T ss_dssp TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCT----TEEEEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCC----CCEEEEEEEE
Confidence 4689999999999999985 68999999999953 378999999999999999999998653 578999999
Q ss_pred eCCCCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceecC
Q 042999 88 NDKRYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKKS 130 (1006)
Q Consensus 88 d~d~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~ 130 (1006)
|+|.+ ++|++||++.++++++ ..+....+|++|.+..
T Consensus 105 d~d~~-----~~d~~iG~~~i~l~~l-~~~~~~~~W~~L~~~~ 141 (171)
T 2q3x_A 105 DYGRM-----DHKCFMGVAQILLEEL-DLSSMVIGWYKLFPPS 141 (171)
T ss_dssp ECSTT-----CSSEEEEEEEECGGGS-CTTSCEEEEEECBCGG
T ss_pred cCCCC-----CCCCEEEEEEEEHHHc-ccCCCcceeEECCCcc
Confidence 99998 7899999999999996 4455677899998754
No 66
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.60 E-value=1.2e-14 Score=143.17 Aligned_cols=120 Identities=20% Similarity=0.281 Sum_probs=91.0
Q ss_pred CcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECCEEEEeeccc-CCCCCeeccEEEEEEeCCCcEEEEEEEECCCC
Q 042999 617 PVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGKKWVRTRTIT-DCFDPRWNEQYTWQVYDPCTVLTVGVFDNWRM 695 (1006)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~~~~rT~~~~-~~~nP~wne~~~~~v~~~~~~l~i~v~d~~~~ 695 (1006)
.+|.|.|+|++|++|+. .|++||||+++ .+..||++++ +++||+|||+|.|.+.+....|.|+|||+| +
T Consensus 12 ~~~~L~V~V~~A~~l~~-------~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~ 81 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDGA-------QEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-L 81 (167)
T ss_dssp CCCEEEEEEEEEECSSC-------GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-S
T ss_pred ceEEEEEEEEEEECCCC-------CCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-C
Confidence 46899999999998842 67899999999 3346787776 599999999999999988889999999999 7
Q ss_pred CcCCCCCCCCceeEEEEEEcccccCCc------eEeeEEEeeeecc--CCc--ccccEEEEEEEEecC
Q 042999 696 FADASEERPDYRIGKIRIRVSTLENNK------VYTTSYPLLVLLR--TGL--KKMGEIELAVRFVCP 753 (1006)
Q Consensus 696 ~~~~~~~~~d~~lG~~~i~l~~l~~~~------~~~~~~~L~~~~~--~g~--~~~G~l~l~~~~~~~ 753 (1006)
+ +|++||++.|+|.++.... ....||.+..... .|. ...|.|.+.++|...
T Consensus 82 ~-------~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e~~ 142 (167)
T 2cjs_A 82 I-------WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFELP 142 (167)
T ss_dssp S-------CCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEECC
T ss_pred C-------CCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEeecC
Confidence 6 7999999999999985432 2234444432211 111 123668888888643
No 67
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.60 E-value=1.8e-15 Score=146.11 Aligned_cols=108 Identities=26% Similarity=0.501 Sum_probs=91.4
Q ss_pred cccEEEEEEEEecCCCCCCCCCCCCcEEEEEECC-----eEEEeeCcCCCCCCeeeeEEEEE-eeCCCCCCCceEEEEEE
Q 042999 14 TVRKLVVEVVDARDLLPKDGQGSSSPYVIADFDG-----QRKRTSTKFRDLNPVWNEPLEFI-VSDPKNMDCEELEIEVY 87 (1006)
Q Consensus 14 ~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~-~~~~~~~~~~~L~i~V~ 87 (1006)
..+.|.|+|++|++|+.++..|.+||||++++.. .+++|+++++++||+|||+|.|. +... +.....|.|+||
T Consensus 27 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~-~~~~~~l~i~V~ 105 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEE-DMQRKTLRISVC 105 (142)
T ss_dssp GGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHH-HHHHCEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHH-HccCCEEEEEEE
Confidence 4578999999999999999889999999999964 67999999999999999999998 4431 111258999999
Q ss_pred eCCCCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEcee
Q 042999 88 NDKRYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEK 128 (1006)
Q Consensus 88 d~d~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~ 128 (1006)
|++.+ +++++||++.+++.++ ..+.....|++|.+
T Consensus 106 d~d~~-----~~d~~iG~~~i~l~~l-~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 106 DEDKF-----GHNEFIGETRFSLKKL-KANQRKNFNICLER 140 (142)
T ss_dssp EECTT-----SCEEEEEEEEEEGGGC-CTTCCEEEEEECBC
T ss_pred ECCCC-----CCCcEEEEEEEEHHHc-CCCCccEEEEeccc
Confidence 99998 7899999999999996 55556667888875
No 68
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.59 E-value=1e-14 Score=169.22 Aligned_cols=126 Identities=18% Similarity=0.215 Sum_probs=105.0
Q ss_pred CCcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECCEEEEeecccCCCCCeeccEEEEEEeC--CCcEEEEEEEECC
Q 042999 616 PPVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGKKWVRTRTITDCFDPRWNEQYTWQVYD--PCTVLTVGVFDNW 693 (1006)
Q Consensus 616 ~~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~~~~rT~~~~~~~nP~wne~~~~~v~~--~~~~l~i~v~d~~ 693 (1006)
...|.|+|+|++|+||++ | . +|++||||+|.++++..||+++++++||+|||+|.|.+.+ ....|.|+|||+|
T Consensus 391 ~~~~~L~V~V~~A~~L~~-D---~-~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D 465 (540)
T 3nsj_A 391 RGLAHLVVSNFRAEHLWG-D---Y-TTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDAD 465 (540)
T ss_dssp TTEEEEEEEEEEEESCCC-S---S-CSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECC
T ss_pred CcccEEEEEEEEccCCCc-c---c-CCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECC
Confidence 468999999999999976 4 4 8899999999999999999999999999999999999754 6678999999999
Q ss_pred CCCcCCCCCCCCceeEEEEEEcccccCCceEeeEEEeeeeccCCcccccEEEEEEEEecCCCCcccccccCCCCCC
Q 042999 694 RMFADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLLVLLRTGLKKMGEIELAVRFVCPSMLPETSSVYGQPLLP 769 (1006)
Q Consensus 694 ~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~~~~~~~~~~~~~~~~~p~~p 769 (1006)
..+ +||+||.+.++|. .| ..+.|++| +.|+|++++..++.-. +--.++.-..|
T Consensus 466 ~~~-------~dD~LG~~~~~L~---~g-~~~~~~~l---------~~G~l~~~~~~~c~p~---l~g~~c~~y~~ 518 (540)
T 3nsj_A 466 YGW-------DDDLLGSCDRSPH---SG-FHEVTCEL---------NHGRVKFSYHAKCLPH---LTGGTCLEYAP 518 (540)
T ss_dssp SSS-------CCEEEEEEEECCC---SE-EEEEEEEC---------SSSEEEEEEEEEECTT---EESTTSCEECC
T ss_pred CCC-------CCCEEEEEEEEee---CC-cEEEEEEc---------CCeEEEEEEEEEECCC---CCCChhhhcCC
Confidence 987 8899999999987 34 35789887 2399999999998643 33344444444
No 69
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.58 E-value=6.7e-15 Score=146.15 Aligned_cols=93 Identities=24% Similarity=0.374 Sum_probs=82.9
Q ss_pred ccEEEEEEEEecCCCCCCCCCCCCcEEEEEECC-----eEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeC
Q 042999 15 VRKLVVEVVDARDLLPKDGQGSSSPYVIADFDG-----QRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYND 89 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~ 89 (1006)
.+.|.|+|++|++|+.++..|.+||||++++.+ .+++|+++++++||+|||+|.|.+.... +....|.|+|||+
T Consensus 36 ~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-l~~~~L~i~V~d~ 114 (166)
T 2cm5_A 36 QGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSD-LAKKSLDISVWDY 114 (166)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGG-GGGCEEEEEEEEC
T ss_pred CCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHh-cCCCEEEEEEEEC
Confidence 568999999999999999899999999999974 6799999999999999999999986532 2256899999999
Q ss_pred CCCCCCCCCCCceeEEEEEeCeee
Q 042999 90 KRYCNGSGRKNHFLGRVKLCGSQF 113 (1006)
Q Consensus 90 d~~~~~~~~~d~~lG~~~v~l~~l 113 (1006)
+.+ +++++||++.+++.++
T Consensus 115 d~~-----~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 115 DIG-----KSNDYIGGCQLGISAK 133 (166)
T ss_dssp CSS-----SCCEEEEEEEEETTCC
T ss_pred CCC-----CCCcEEEeEEEecccC
Confidence 998 7899999999999874
No 70
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.58 E-value=7.2e-15 Score=144.85 Aligned_cols=109 Identities=25% Similarity=0.333 Sum_probs=91.1
Q ss_pred ccEEEEEEEEecCCCCCCCCCCCCcEEEEEECC-----eEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeC
Q 042999 15 VRKLVVEVVDARDLLPKDGQGSSSPYVIADFDG-----QRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYND 89 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~ 89 (1006)
.+.|.|+|++|++|+.++..|.+||||++++.. .+++|+++++++||+|||+|.|.+.... +....|.|+|||+
T Consensus 24 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-l~~~~l~i~V~d~ 102 (159)
T 1tjx_A 24 AGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQ-IQKVQVVVTVLDY 102 (159)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGG-GGGCEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHH-hCCcEEEEEEEEC
Confidence 568999999999999999889999999999952 4689999999999999999999986532 2245799999999
Q ss_pred CCCCCCCCCCCceeEEEEEeCeee----------ee-eCCceeEEEEceec
Q 042999 90 KRYCNGSGRKNHFLGRVKLCGSQF----------AR-RGDEGLVYFPLEKK 129 (1006)
Q Consensus 90 d~~~~~~~~~d~~lG~~~v~l~~l----------~~-~~~~~~~w~~L~~~ 129 (1006)
+.+ +++++||++.+++..+ +. .+....+|++|...
T Consensus 103 d~~-----~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~ 148 (159)
T 1tjx_A 103 DKI-----GKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 148 (159)
T ss_dssp CSS-----SCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCH
T ss_pred CCC-----CCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCc
Confidence 998 7899999999999852 22 23455689999764
No 71
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.57 E-value=1.3e-14 Score=134.03 Aligned_cols=117 Identities=16% Similarity=0.246 Sum_probs=102.0
Q ss_pred EEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECCEEEEeeccc-CCCCCeeccEEEEEEeC---CCcEEEEEEEECCC
Q 042999 619 GILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGKKWVRTRTIT-DCFDPRWNEQYTWQVYD---PCTVLTVGVFDNWR 694 (1006)
Q Consensus 619 g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~~~~rT~~~~-~~~nP~wne~~~~~v~~---~~~~l~i~v~d~~~ 694 (1006)
--|+|.|.+|.|| .|++|||+.+.+-+.+.+|++++ +++||+|||.|+|++.. ....|.|.|||+++
T Consensus 21 msL~V~l~~a~~L---------pg~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~ 91 (144)
T 3l9b_A 21 MALIVHLKTVSEL---------RGRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK 91 (144)
T ss_dssp EEEEEEEEEEESC---------CSCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECT
T ss_pred EEEEEEEEEecCC---------CCCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcc
Confidence 4799999999999 45799999999999999999998 59999999999999975 56799999999999
Q ss_pred CCcCCCCCCCCceeEEEEEEcccccCCceEeeEEEeeeeccCCcccccEEEEEEEEecC
Q 042999 695 MFADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLLVLLRTGLKKMGEIELAVRFVCP 753 (1006)
Q Consensus 695 ~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~~~~~ 753 (1006)
++ ++++||++.|+|.++..+.....+-+|.+.+.+. -.++|.+.++|.++
T Consensus 92 v~-------~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~--~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 92 VF-------SNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAI--IKTSLSMEVRYQAA 141 (144)
T ss_dssp TS-------CCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCE--EEEEEEEEEEEEET
T ss_pred cc-------CCCEEEEEEEEhHHhccCCeEEEeecccCCCCCc--cccEEEEEEEecCC
Confidence 98 8999999999999998877666777887754432 23999999999875
No 72
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=2.6e-15 Score=145.08 Aligned_cols=108 Identities=27% Similarity=0.426 Sum_probs=89.5
Q ss_pred ccEEEEEEEEecCCCCCCCCCCCCcEEEEEEC-----CeEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeC
Q 042999 15 VRKLVVEVVDARDLLPKDGQGSSSPYVIADFD-----GQRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYND 89 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~-----~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~ 89 (1006)
.+.|.|+|++|++|+.++..| +||||++++. ..+++|+++++++||+|||+|.|.+.... +....|.|+|||+
T Consensus 23 ~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-l~~~~L~i~V~d~ 100 (142)
T 2dmg_A 23 RNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPE-VQRRTLDVAVKNS 100 (142)
T ss_dssp TTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHH-HHHCEEEEEEEEC
T ss_pred CCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHH-hCcCEEEEEEEEC
Confidence 468999999999999999888 9999999993 25789999999999999999999975421 1135899999999
Q ss_pred CCCCCCCCCC--CceeEEEEEeCeeeeeeCCceeEEEEceecC
Q 042999 90 KRYCNGSGRK--NHFLGRVKLCGSQFARRGDEGLVYFPLEKKS 130 (1006)
Q Consensus 90 d~~~~~~~~~--d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~ 130 (1006)
+.+ ++ +++||++.+++.++ ..+....+|++|.+.+
T Consensus 101 d~~-----~~~~~~~iG~~~i~l~~~-~~~~~~~~W~~L~~~~ 137 (142)
T 2dmg_A 101 GGF-----LSKDKGLLGKVLVALASE-ELAKGWTQWYDLTEDS 137 (142)
T ss_dssp CCS-----SCCSCCCCEEEEEECCCS-TTTTCBCCBCCCBCSC
T ss_pred CCc-----cccCCcEEEEEEEecccc-cccccccceeeccCCC
Confidence 987 43 57999999999986 3444566899998754
No 73
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.57 E-value=1.3e-14 Score=141.94 Aligned_cols=92 Identities=29% Similarity=0.408 Sum_probs=75.9
Q ss_pred ccEEEEEEEEecCCCCCCCCCCCCcEEEEEE--CCe---EEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeC
Q 042999 15 VRKLVVEVVDARDLLPKDGQGSSSPYVIADF--DGQ---RKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYND 89 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~--~~~---~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~ 89 (1006)
.+.|.|+|++|++|+.++..|.+||||++++ ++. +++|+++++++||+|||+|.|.+.... +....|.|+|||+
T Consensus 29 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-l~~~~l~v~V~d~ 107 (153)
T 1w15_A 29 TNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCES-LEEISVEFLVLDS 107 (153)
T ss_dssp TTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSS-STTEEEEEEEEEC
T ss_pred CCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHH-hCceEEEEEEEeC
Confidence 4689999999999999998899999999999 333 679999999999999999999987642 2246899999999
Q ss_pred CCCCCCCCCCCceeEEEEEeCee
Q 042999 90 KRYCNGSGRKNHFLGRVKLCGSQ 112 (1006)
Q Consensus 90 d~~~~~~~~~d~~lG~~~v~l~~ 112 (1006)
+.+ +++++||++.++++.
T Consensus 108 d~~-----~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 108 ERG-----SRNEVIGRLVLGATA 125 (153)
T ss_dssp CTT-----SCCEEEEEEEESTTC
T ss_pred CCC-----CCCcEEEEEEECCCC
Confidence 998 789999999999987
No 74
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.57 E-value=1e-14 Score=140.17 Aligned_cols=94 Identities=29% Similarity=0.481 Sum_probs=82.6
Q ss_pred cccEEEEEEEEecCCCCCCCCCCCCcEEEEEECC-----eEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEe
Q 042999 14 TVRKLVVEVVDARDLLPKDGQGSSSPYVIADFDG-----QRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYN 88 (1006)
Q Consensus 14 ~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d 88 (1006)
..+.|.|+|++|++|+.++..|.+||||++++.+ .+++|+++++++||+|||+|.|.+.... +....|.|+|||
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~-l~~~~l~~~V~d 92 (138)
T 3n5a_A 14 SANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEK-LRETTIIITVMD 92 (138)
T ss_dssp TTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGG-GGGEEEEEEEEE
T ss_pred CCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhh-cCceEEEEEEEE
Confidence 3578999999999999999889999999999963 4689999999999999999999987642 224689999999
Q ss_pred CCCCCCCCCCCCceeEEEEEeCeee
Q 042999 89 DKRYCNGSGRKNHFLGRVKLCGSQF 113 (1006)
Q Consensus 89 ~d~~~~~~~~~d~~lG~~~v~l~~l 113 (1006)
++.+ ++|++||++.++++++
T Consensus 93 ~~~~-----~~~~~lG~~~i~l~~~ 112 (138)
T 3n5a_A 93 KDKL-----SRNDVIGKIYLSWKSG 112 (138)
T ss_dssp CCSS-----SCCEEEEEEEESSSSC
T ss_pred CCCC-----CCCcEEEEEEEccccC
Confidence 9998 7899999999999863
No 75
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=3.1e-15 Score=145.44 Aligned_cols=109 Identities=23% Similarity=0.310 Sum_probs=89.6
Q ss_pred ccEEEEEEEEecCCCCC-CC------CCCCCcEEEEEEC---CeEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEE
Q 042999 15 VRKLVVEVVDARDLLPK-DG------QGSSSPYVIADFD---GQRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEI 84 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~-~~------~g~~dPyv~v~~~---~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i 84 (1006)
.+.|.|+|++|++|+.+ +. .|.+||||++++. .++++|+++++++||+|||+|.|.+.... .....|.|
T Consensus 25 ~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-l~~~~L~~ 103 (147)
T 2enp_A 25 HNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLE-AQRRTLLL 103 (147)
T ss_dssp TTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHH-HHHSEEEE
T ss_pred CCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHH-hccCEEEE
Confidence 46899999999999984 43 3589999999996 46789999999999999999999976421 11358999
Q ss_pred EEEeCCCCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceecC
Q 042999 85 EVYNDKRYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKKS 130 (1006)
Q Consensus 85 ~V~d~d~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~ 130 (1006)
+|||++.+ +++++||++.+++.++ ........|+.|.+.+
T Consensus 104 ~V~d~d~~-----~~~~~iG~~~i~l~~l-~~~~~~~~w~~L~~~~ 143 (147)
T 2enp_A 104 TVVDFDKF-----SRHCVIGKVSVPLCEV-DLVKGGHWWKALIPSG 143 (147)
T ss_dssp EEECCSTT-----CCSCCCEEEEEETTTS-CTTTCCCEEECCBCCC
T ss_pred EEEECCCC-----cCCcEEEEEEEechhc-CCCCCccEEEEeecCC
Confidence 99999998 7899999999999996 3444456899998754
No 76
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.54 E-value=1.9e-14 Score=170.44 Aligned_cols=119 Identities=26% Similarity=0.442 Sum_probs=103.3
Q ss_pred CCcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECCEEEEeecccCCCCCeeccEEEEEEeCCC-cEEEEEEEECCC
Q 042999 616 PPVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGKKWVRTRTITDCFDPRWNEQYTWQVYDPC-TVLTVGVFDNWR 694 (1006)
Q Consensus 616 ~~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~~~~rT~~~~~~~nP~wne~~~~~v~~~~-~~l~i~v~d~~~ 694 (1006)
...|.|.|+|++|+||+++| . +|++||||++.++++..+|+++++|+||.|||.|.|.+..+. ..|.|+|||+|.
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d---~-~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~ 459 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACK---P-NGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQ 459 (510)
T ss_dssp --CEEEEEEEEEEESCCCCS---T-TSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCS
T ss_pred CCCceEEEEeceeecCCCCC---C-CCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCC
Confidence 46899999999999998854 4 889999999999999999999999999999999999998755 689999999999
Q ss_pred CCcCCCCCCCCceeEEEEEEcccccCCce----EeeEEEeeeeccCCcccccEEEEEEEEe
Q 042999 695 MFADASEERPDYRIGKIRIRVSTLENNKV----YTTSYPLLVLLRTGLKKMGEIELAVRFV 751 (1006)
Q Consensus 695 ~~~~~~~~~~d~~lG~~~i~l~~l~~~~~----~~~~~~L~~~~~~g~~~~G~l~l~~~~~ 751 (1006)
++ +|++||.+.++|.++..+.. ...|++|... ..|+|++++.+.
T Consensus 460 ~~-------~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~------~~G~i~l~~~l~ 507 (510)
T 3jzy_A 460 FS-------PDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV------PTGEVWVRFDLQ 507 (510)
T ss_dssp SS-------SCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS------SSCEEEEEEEEE
T ss_pred CC-------CCCceEEEEEEHHHhccccCCCCceeeeecCCCC------CCceEEEEEEEE
Confidence 87 89999999999999976543 5789998542 359999988875
No 77
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.53 E-value=4.7e-14 Score=133.43 Aligned_cols=99 Identities=21% Similarity=0.248 Sum_probs=78.5
Q ss_pred cccEEEEEEEEecCCCCCCCCCCCCcEEEEEECCeEEEeeCcC-CCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeCCCC
Q 042999 14 TVRKLVVEVVDARDLLPKDGQGSSSPYVIADFDGQRKRTSTKF-RDLNPVWNEPLEFIVSDPKNMDCEELEIEVYNDKRY 92 (1006)
Q Consensus 14 ~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~~~~kT~~~~-~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~d~~ 92 (1006)
..+.|.|+|++|++|.. .|.+||||++. .+..+|++++ +++||+|||+|.|.+... ...|.|+|||+| +
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~----~~~L~~~V~D~d-~ 72 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRL----DLGLTVEVWNKG-L 72 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCC----SSEEEEEEEECC-S
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCC----CCeEEEEEEECC-C
Confidence 35789999999998842 57899999999 3445566654 799999999999999864 457999999999 7
Q ss_pred CCCCCCCCceeEEEEEeCeeeeeeCCc-eeEEEEce
Q 042999 93 CNGSGRKNHFLGRVKLCGSQFARRGDE-GLVYFPLE 127 (1006)
Q Consensus 93 ~~~~~~~d~~lG~~~v~l~~l~~~~~~-~~~w~~L~ 127 (1006)
++|++||++.++++++...+.. ...|.++.
T Consensus 73 -----~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~ 103 (131)
T 2cjt_A 73 -----IWDTMVGTVWIPLRTIRQSNEEGPGEWLTLD 103 (131)
T ss_dssp -----SCEEEEEEEEEEGGGSCBCSSCCCCEEEECB
T ss_pred -----CCCCeEEEEEEEHHHhhhcCCCCccccEEcc
Confidence 6899999999999997554422 22566654
No 78
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.51 E-value=6.1e-14 Score=166.10 Aligned_cols=122 Identities=23% Similarity=0.378 Sum_probs=102.7
Q ss_pred CCcccEEEEEEEEecCCCCCCCCCCCCcEEEEEECCeEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeCCC
Q 042999 12 QFTVRKLVVEVVDARDLLPKDGQGSSSPYVIADFDGQRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYNDKR 91 (1006)
Q Consensus 12 ~~~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~d~ 91 (1006)
....+.|.|+|++|++|+++|..|.+||||++.+++++++|+++++|+||+|||+|.|.+.... ...|.|+|||+|.
T Consensus 383 ~~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~---~~~l~~~v~d~d~ 459 (510)
T 3jzy_A 383 TSGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLY---QDVLCLTLFDRDQ 459 (510)
T ss_dssp ---CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTT---TCEEEEEEEECCS
T ss_pred CCCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCC---CCEEEEEEEeCCC
Confidence 3456899999999999999999999999999999999999999999999999999999997653 4689999999999
Q ss_pred CCCCCCCCCceeEEEEEeCeeeeeeCC---ceeEEEEceecCCceeeeEEEEEEEEEE
Q 042999 92 YCNGSGRKNHFLGRVKLCGSQFARRGD---EGLVYFPLEKKSVFSWIRGEIGLRIYYY 146 (1006)
Q Consensus 92 ~~~~~~~~d~~lG~~~v~l~~l~~~~~---~~~~w~~L~~~~~~~~~~G~i~l~~~~~ 146 (1006)
+ ++|++||++.++++++..... ....|++|.... .|+|.+.+.+.
T Consensus 460 ~-----~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~~-----~G~i~l~~~l~ 507 (510)
T 3jzy_A 460 F-----SPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEVP-----TGEVWVRFDLQ 507 (510)
T ss_dssp S-----SSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSSS-----SCEEEEEEEEE
T ss_pred C-----CCCCceEEEEEEHHHhccccCCCCceeeeecCCCCC-----CceEEEEEEEE
Confidence 8 789999999999999643211 245799987543 68888887653
No 79
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.50 E-value=1.5e-13 Score=135.43 Aligned_cols=122 Identities=19% Similarity=0.110 Sum_probs=89.0
Q ss_pred CCcccEEEEEEEEecCCCCCCCCCCCCcEEEEEECCeEEEeeCcC-CCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeCC
Q 042999 12 QFTVRKLVVEVVDARDLLPKDGQGSSSPYVIADFDGQRKRTSTKF-RDLNPVWNEPLEFIVSDPKNMDCEELEIEVYNDK 90 (1006)
Q Consensus 12 ~~~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~~~~kT~~~~-~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~d 90 (1006)
.+..+.|.|+|++|++|. ..|.+||||++. .+..+|++++ +++||+|||+|.|.+... ...|.|+|||+|
T Consensus 10 ~g~~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~----~~~L~~~V~D~d 80 (167)
T 2cjs_A 10 GGILSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRL----DLGLTVEVWNKG 80 (167)
T ss_dssp CSCCCEEEEEEEEEECSS---CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCT----TSEEEEEEEECC
T ss_pred CCceEEEEEEEEEEECCC---CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCC----CCEEEEEEEECC
Confidence 345679999999999884 257899999999 3446677765 699999999999999864 457999999999
Q ss_pred CCCCCCCCCCceeEEEEEeCeeeeeeCCce-eEE----EEceecCCc-----eeeeEEEEEEEEEEec
Q 042999 91 RYCNGSGRKNHFLGRVKLCGSQFARRGDEG-LVY----FPLEKKSVF-----SWIRGEIGLRIYYYDE 148 (1006)
Q Consensus 91 ~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~-~~w----~~L~~~~~~-----~~~~G~i~l~~~~~~~ 148 (1006)
+ ++|++||++.++|+++...+... ..| +.+...... ....|.+++++.+...
T Consensus 81 -~-----~~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e~~ 142 (167)
T 2cjs_A 81 -L-----IWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFELP 142 (167)
T ss_dssp -S-----SCCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEECC
T ss_pred -C-----CCCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEeecC
Confidence 7 68999999999999975544211 134 443322211 1234567777777543
No 80
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.48 E-value=2e-13 Score=158.41 Aligned_cols=113 Identities=21% Similarity=0.276 Sum_probs=95.7
Q ss_pred ccEEEEEEEEecCCCCCCCCCCCCcEEEEEECCeEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeCCCCCC
Q 042999 15 VRKLVVEVVDARDLLPKDGQGSSSPYVIADFDGQRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYNDKRYCN 94 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~d~~~~ 94 (1006)
.+.|.|+|++|++|+. |..|++||||+|.+++++++|+++++++||+|||+|.|.+.... ....|+|+|||+|..
T Consensus 393 ~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~--~~~~L~~~V~D~D~~-- 467 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLS--TGGPLRVQVWDADYG-- 467 (540)
T ss_dssp EEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETT--TCCCEEEEEEECCSS--
T ss_pred ccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCC--CCCEEEEEEEECCCC--
Confidence 6799999999999998 88899999999999999999999999999999999999864321 156899999999998
Q ss_pred CCCCCCceeEEEEEeCeeeeeeCCceeEEEEceecCCceeeeEEEEEEEEEEec
Q 042999 95 GSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKKSVFSWIRGEIGLRIYYYDE 148 (1006)
Q Consensus 95 ~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~~~ 148 (1006)
++||+||.+.++|.. + ....|++|. .|+|+++++..=.
T Consensus 468 ---~~dD~LG~~~~~L~~----g-~~~~~~~l~--------~G~l~~~~~~~c~ 505 (540)
T 3nsj_A 468 ---WDDDLLGSCDRSPHS----G-FHEVTCELN--------HGRVKFSYHAKCL 505 (540)
T ss_dssp ---SCCEEEEEEEECCCS----E-EEEEEEECS--------SSEEEEEEEEEEC
T ss_pred ---CCCCEEEEEEEEeeC----C-cEEEEEEcC--------CeEEEEEEEEEEC
Confidence 789999999999873 2 345788864 5888888775433
No 81
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.47 E-value=6e-13 Score=158.33 Aligned_cols=124 Identities=19% Similarity=0.299 Sum_probs=104.6
Q ss_pred CCCcccEEEEEEEEecCCCCCCC--CCCCCcEEEEEECC-----eEEEeeCcCCC-CCCeeeeEEEEEeeCCCCCCCceE
Q 042999 11 QQFTVRKLVVEVVDARDLLPKDG--QGSSSPYVIADFDG-----QRKRTSTKFRD-LNPVWNEPLEFIVSDPKNMDCEEL 82 (1006)
Q Consensus 11 ~~~~~~~L~V~v~~a~~L~~~~~--~g~~dPyv~v~~~~-----~~~kT~~~~~t-~nP~wne~f~f~~~~~~~~~~~~L 82 (1006)
|....+.|.|+|++|++|+.++. .|.+||||+|.+.+ .+++|++++++ +||+|||+|.|.+..+. ...|
T Consensus 492 ~~~~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~e---l~~L 568 (624)
T 1djx_A 492 PWWRPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPD---LALV 568 (624)
T ss_dssp TTCCCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGG---GCEE
T ss_pred CCccceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCC---CCEE
Confidence 44567899999999999998874 68999999999943 67999999987 99999999999998753 3589
Q ss_pred EEEEEeCCCCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceecCCceeeeEEEEEEEEEE
Q 042999 83 EIEVYNDKRYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKKSVFSWIRGEIGLRIYYY 146 (1006)
Q Consensus 83 ~i~V~d~d~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~ 146 (1006)
+|+|||+|.+ +++++||++.+++..+ .. ...|++|.+..+..-..|.|.|++.+.
T Consensus 569 ~~~V~D~D~~-----~~dd~iG~~~ipl~~L-~~---G~r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 569 RFMVEDYDSS-----SKNDFIGQSTIPWNSL-KQ---GYRHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp EEEEEECCSS-----SCCEEEEEEEEEGGGB-CC---EEEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred EEEEEEcCCC-----CCCceeEEEEEEHHHc-CC---CcEEEeCCCCCcCCCCceEEEEEEEEE
Confidence 9999999998 7899999999999996 33 346999987655544578999998875
No 82
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.47 E-value=2.9e-13 Score=161.09 Aligned_cols=122 Identities=18% Similarity=0.207 Sum_probs=102.2
Q ss_pred CcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECC-----EEEEeecccCC-CCCeeccEEEEEEeCCC-cEEEEEE
Q 042999 617 PVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGK-----KWVRTRTITDC-FDPRWNEQYTWQVYDPC-TVLTVGV 689 (1006)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~-----~~~rT~~~~~~-~nP~wne~~~~~v~~~~-~~l~i~v 689 (1006)
..+.|+|+|++|++|++++. +. +|.+||||+|.+.+ ...||++++++ +||+|||+|.|.+..+. ..|.|+|
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~-~~-~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V 572 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNK-NK-NSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMV 572 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSS-CS-SSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccc-cc-cCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEE
Confidence 57899999999999998652 13 67899999999943 68899999998 99999999999998764 6899999
Q ss_pred EECCCCCcCCCCCCCCceeEEEEEEcccccCCceEeeEEEeeeeccCCcccccEEEEEEEEe
Q 042999 690 FDNWRMFADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLLVLLRTGLKKMGEIELAVRFV 751 (1006)
Q Consensus 690 ~d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~~~ 751 (1006)
||+|.++ +|++||++.|+|..|..|. +|++|.+...... ..|+|.+.+.|+
T Consensus 573 ~D~D~~~-------~dd~iG~~~ipl~~L~~G~---r~v~L~d~~g~~~-~~~~L~v~i~~~ 623 (624)
T 1djx_A 573 EDYDSSS-------KNDFIGQSTIPWNSLKQGY---RHVHLLSKNGDQH-PSATLFVKISIQ 623 (624)
T ss_dssp EECCSSS-------CCEEEEEEEEEGGGBCCEE---EEEEEECTTSCEE-EEEEEEEEEEEE
T ss_pred EEcCCCC-------CCceeEEEEEEHHHcCCCc---EEEeCCCCCcCCC-CceEEEEEEEEE
Confidence 9999887 8999999999999998763 6999987543222 348888888875
No 83
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.44 E-value=8.6e-15 Score=170.01 Aligned_cols=124 Identities=20% Similarity=0.306 Sum_probs=23.8
Q ss_pred CcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECCE-EEEeecccCC---CCCeeccEEEEEEeCCCcEEEEEEEEC
Q 042999 617 PVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGKK-WVRTRTITDC---FDPRWNEQYTWQVYDPCTVLTVGVFDN 692 (1006)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~~-~~rT~~~~~~---~nP~wne~~~~~v~~~~~~l~i~v~d~ 692 (1006)
..|.|+|+|++|+||+++ .||||++.++++ +.||+++++| +||+|||+|.|.+......|.|+|||+
T Consensus 9 ~~~~L~V~VieAk~L~~~---------ddpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~ 79 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPK---------KRYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRD 79 (483)
T ss_dssp EEECC------------------------------------------------------CCEECC---------------
T ss_pred eccEEEEEEEEcCCcCCC---------CCCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEec
Confidence 468899999999999763 289999999875 6799999999 999999999999876668899999994
Q ss_pred -CC---CCcCCCCCCCCceeEEEEEEcccccCCceEeeEEEeeeecc---------------------CCcccccEEEEE
Q 042999 693 -WR---MFADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLLVLLR---------------------TGLKKMGEIELA 747 (1006)
Q Consensus 693 -~~---~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~---------------------~g~~~~G~l~l~ 747 (1006)
|. .+ +|++||++.|++.++..+...+.||+|..... ++.+..|+|+|+
T Consensus 80 ~d~~~~~~-------~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~ 152 (483)
T 3bxj_A 80 SDKKRKKD-------KAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLK 152 (483)
T ss_dssp ----------------------------------CCEECC--------------------------------------CE
T ss_pred CCccccCC-------CCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEE
Confidence 42 34 79999999999999998887889999965432 122345999999
Q ss_pred EEEecCCCC
Q 042999 748 VRFVCPSML 756 (1006)
Q Consensus 748 ~~~~~~~~~ 756 (1006)
++|.+..++
T Consensus 153 v~~~~~~vl 161 (483)
T 3bxj_A 153 ARYQTMSIL 161 (483)
T ss_dssp EEEEECCBC
T ss_pred EEeeeeeec
Confidence 999976544
No 84
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.37 E-value=5e-13 Score=159.67 Aligned_cols=104 Identities=17% Similarity=0.253 Sum_probs=93.6
Q ss_pred CCcEEEEEEEeeccCCcc---CccCCCCCCCCCeEEEEEEC---CEEEEeecccCCCCCeeccEEEEEEeC-CCcEEEEE
Q 042999 616 PPVGILELGILGARGLLP---MKTKNGGKGSTDAYCVAKYG---KKWVRTRTITDCFDPRWNEQYTWQVYD-PCTVLTVG 688 (1006)
Q Consensus 616 ~~~g~L~v~v~~a~~L~~---~~~~d~~~g~sdpyv~v~~~---~~~~rT~~~~~~~nP~wne~~~~~v~~-~~~~l~i~ 688 (1006)
++.|.|+|+|++|++|++ +|. .|++||||++.++ .+..||+++++++||+|||+|.|.+.. ....|+|+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~----~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~ 90 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDM----LDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEIT 90 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHH----HCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEE
T ss_pred CCccEEEEEEEEEECCCCccccCC----CCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEE
Confidence 568999999999999988 553 7889999999998 468999999999999999999999987 45689999
Q ss_pred EEECCCCCcCCCCCCCCceeEEEEEEcccccCCceEeeEEEee
Q 042999 689 VFDNWRMFADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLL 731 (1006)
Q Consensus 689 v~d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~ 731 (1006)
|||+|.++ |++||++.|+|.++..+.....||+|.
T Consensus 91 V~D~D~~~--------ddfIG~v~I~L~~L~~g~~~~~w~~L~ 125 (749)
T 1cjy_A 91 LMDANYVM--------DETLGTATFTVSSMKVGEKKEVPFIFN 125 (749)
T ss_dssp EEECCSSS--------CEEEEEECCBSTTSCTTCCCCEEEEET
T ss_pred EEECCCCC--------CceeEEEEEEHHHcCCCCceEEEEecC
Confidence 99999863 889999999999998887778999994
No 85
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.35 E-value=9.3e-13 Score=157.38 Aligned_cols=116 Identities=28% Similarity=0.382 Sum_probs=95.6
Q ss_pred CCCCCCCCCCcccEEEEEEEEecCCCC---CCCCCCCCcEEEEEEC---CeEEEeeCcCCCCCCeeeeEEEEEeeCCCCC
Q 042999 4 PSQPPPQQQFTVRKLVVEVVDARDLLP---KDGQGSSSPYVIADFD---GQRKRTSTKFRDLNPVWNEPLEFIVSDPKNM 77 (1006)
Q Consensus 4 p~~~~~~~~~~~~~L~V~v~~a~~L~~---~~~~g~~dPyv~v~~~---~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~ 77 (1006)
|.+....+....+.|.|+|++|++|+. +|..|.+||||++.++ ..+++|+++++++||+|||+|.|.+....
T Consensus 6 P~~~~~ve~~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~-- 83 (749)
T 1cjy_A 6 PYQHIIVEHQYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQ-- 83 (749)
T ss_dssp -------CCCCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTS--
T ss_pred CCccccccCCCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCC--
Confidence 333333344457899999999999998 7878899999999998 46799999999999999999999998743
Q ss_pred CCceEEEEEEeCCCCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceec
Q 042999 78 DCEELEIEVYNDKRYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKK 129 (1006)
Q Consensus 78 ~~~~L~i~V~d~d~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~ 129 (1006)
...|.|+|||+|.+ + |++||++.+++.++ ..+.....|++|.+.
T Consensus 84 -~~~L~~~V~D~D~~-----~-ddfIG~v~I~L~~L-~~g~~~~~w~~L~~~ 127 (749)
T 1cjy_A 84 -ENVLEITLMDANYV-----M-DETLGTATFTVSSM-KVGEKKEVPFIFNQV 127 (749)
T ss_dssp -CCBCEEEEEECCSS-----S-CEEEEEECCBSTTS-CTTCCCCEEEEETTT
T ss_pred -CCEEEEEEEECCCC-----C-CceeEEEEEEHHHc-CCCCceEEEEecCCC
Confidence 56899999999999 7 99999999999996 556666789999753
No 86
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.23 E-value=6.8e-13 Score=154.09 Aligned_cols=122 Identities=20% Similarity=0.243 Sum_probs=22.4
Q ss_pred CcccEEEEEEEEecCCCCCCCCCCCCcEEEEEECCe-EEEeeCcCCC---CCCeeeeEEEEEeeCCCCCCCceEEEEEEe
Q 042999 13 FTVRKLVVEVVDARDLLPKDGQGSSSPYVIADFDGQ-RKRTSTKFRD---LNPVWNEPLEFIVSDPKNMDCEELEIEVYN 88 (1006)
Q Consensus 13 ~~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~~-~~kT~~~~~t---~nP~wne~f~f~~~~~~~~~~~~L~i~V~d 88 (1006)
+..+.|+|+|++|++|+++| ||||++.++++ ..||+++++| +||+|||+|.|.+... ...|.|+|||
T Consensus 8 r~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~----~~~L~v~V~d 78 (483)
T 3bxj_A 8 RVDNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPA----VRALRLHLYR 78 (483)
T ss_dssp EEEECC--------------------------------------------------CCEECC------------------
T ss_pred eeccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCC----ccEEEEEEEe
Confidence 35678999999999998876 99999999875 5799999999 9999999999987543 3689999999
Q ss_pred C-C---CCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceecCC----------------------ceeeeEEEEEE
Q 042999 89 D-K---RYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKKSV----------------------FSWIRGEIGLR 142 (1006)
Q Consensus 89 ~-d---~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~~----------------------~~~~~G~i~l~ 142 (1006)
. | +. ++|++||.+.++++++ ..+.....|++|..... .....|.|+++
T Consensus 79 ~~d~~~~~-----~~d~~lG~v~i~l~~l-~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~ 152 (483)
T 3bxj_A 79 DSDKKRKK-----DKAGYVGLVTVPVATL-AGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLK 152 (483)
T ss_dssp ----------------------------------CCEECC--------------------------------------CE
T ss_pred cCCccccC-----CCCceEEEEEEEHHHh-cCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEE
Confidence 4 4 35 5899999999999996 45556678999964321 11346999999
Q ss_pred EEEEecC
Q 042999 143 IYYYDEL 149 (1006)
Q Consensus 143 ~~~~~~~ 149 (1006)
+.|.+..
T Consensus 153 v~~~~~~ 159 (483)
T 3bxj_A 153 ARYQTMS 159 (483)
T ss_dssp EEEEECC
T ss_pred EEeeeee
Confidence 9998775
No 87
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.08 E-value=1.2e-10 Score=141.72 Aligned_cols=104 Identities=25% Similarity=0.410 Sum_probs=91.3
Q ss_pred cEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEE-----CCEEEEeecccCCCCCeeccEEEEEEeC--CCcEEEEEEE
Q 042999 618 VGILELGILGARGLLPMKTKNGGKGSTDAYCVAKY-----GKKWVRTRTITDCFDPRWNEQYTWQVYD--PCTVLTVGVF 690 (1006)
Q Consensus 618 ~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~-----~~~~~rT~~~~~~~nP~wne~~~~~v~~--~~~~l~i~v~ 690 (1006)
.+.|.|+|++|++|+++| . +|.+||||++.+ +....+|+++++++||.|||+|.|.+.. ....|.|+||
T Consensus 171 ~~~L~V~v~~a~~L~~~d---~-~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~ 246 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMD---P-NGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIW 246 (674)
T ss_dssp SSEEEEEEEEEESCCCCS---T-TSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEE
T ss_pred cceeeeeeecccccCCCC---c-ccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEe
Confidence 368999999999999865 4 889999999998 4567899999999999999999999875 4457999999
Q ss_pred ECCCCCcCCCCCCCCceeEEEEEEcccccCCceEeeEEEeeee
Q 042999 691 DNWRMFADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLLVL 733 (1006)
Q Consensus 691 d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 733 (1006)
|+|..+ +|++||.+.++++++..... ..||.|...
T Consensus 247 d~d~~~-------~dd~iG~~~i~l~~l~~~~~-~~w~~Lls~ 281 (674)
T 3pfq_A 247 DWDLTS-------RNDFMGSLSFGISELQKAGV-DGWFKLLSQ 281 (674)
T ss_dssp ECCSSS-------CCEECCBCCCBTTHHHHCCE-EEEEECBCT
T ss_pred eccccc-------ccccccccccchhhhccCCc-ccceeeccc
Confidence 999987 89999999999999987653 899999763
No 88
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.07 E-value=6.1e-10 Score=134.63 Aligned_cols=112 Identities=19% Similarity=0.235 Sum_probs=90.0
Q ss_pred cEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEECC-------EEEEeecccC-CCCCeeccE-EEEE-EeCCC-cEEE
Q 042999 618 VGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYGK-------KWVRTRTITD-CFDPRWNEQ-YTWQ-VYDPC-TVLT 686 (1006)
Q Consensus 618 ~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~~-------~~~rT~~~~~-~~nP~wne~-~~~~-v~~~~-~~l~ 686 (1006)
.+.|+|+|++|++|+. .++||||+|.+.+ +.+||+++++ ++||+|||+ |.|. |..+. ..|+
T Consensus 649 ~~~L~V~Visaq~L~~--------~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lr 720 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSD--------KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVR 720 (816)
T ss_dssp CEEEEEEEEEEECCCS--------SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEE
T ss_pred ceEEEEEEEEcccCCC--------CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEE
Confidence 4899999999999964 2589999999854 6789999987 599999998 9998 76554 5899
Q ss_pred EEEEECCCCCcCCCCCCCCceeEEEEEEcccccCCceEeeEEEeeeeccCCcccccEEEEEEEEec
Q 042999 687 VGVFDNWRMFADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLLVLLRTGLKKMGEIELAVRFVC 752 (1006)
Q Consensus 687 i~v~d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~~~~ 752 (1006)
|.|||++ |++||.+.|||+.|..|- +++||.+...... ..++|.+.+....
T Consensus 721 f~V~D~d-----------ddfiG~~~ipL~~L~~Gy---R~vpL~~~~g~~~-~~atLfv~i~~~~ 771 (816)
T 3qr0_A 721 IIVSEEN-----------GKFIGHRVMPLDGIKPGY---RHVPLRNESNRPL-GLASVFAHIVAKD 771 (816)
T ss_dssp EEEEETT-----------SCEEEEEEEESTTCCCEE---EEEEEECTTSCEE-EEEEEEEEEEEEE
T ss_pred EEEEecC-----------CCeeeEEEEEHHHcCCcc---eEEEEeCCCCCCC-CceEEEEEEEEEe
Confidence 9999974 679999999999999873 5799987543322 2378888777764
No 89
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.05 E-value=2.9e-10 Score=138.38 Aligned_cols=106 Identities=29% Similarity=0.503 Sum_probs=91.6
Q ss_pred ccEEEEEEEEecCCCCCCCCCCCCcEEEEEE-----CCeEEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeC
Q 042999 15 VRKLVVEVVDARDLLPKDGQGSSSPYVIADF-----DGQRKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYND 89 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~-----~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~ 89 (1006)
.+.|.|+|++|++|.++|..|.+||||++.+ ...+++|+++++++||.|||+|.|.+.... . ...|.|+|||+
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~-~-~~~L~v~v~d~ 248 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESD-K-DRRLSVEIWDW 248 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTT-T-TCEEEEEEEEC
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCC-c-cceeeeEEeec
Confidence 4679999999999999999999999999999 346799999999999999999999987643 2 55799999999
Q ss_pred CCCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceec
Q 042999 90 KRYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKK 129 (1006)
Q Consensus 90 d~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~ 129 (1006)
|.. ++|++||.+.++++++...+ ...|+.|...
T Consensus 249 d~~-----~~dd~iG~~~i~l~~l~~~~--~~~w~~Lls~ 281 (674)
T 3pfq_A 249 DLT-----SRNDFMGSLSFGISELQKAG--VDGWFKLLSQ 281 (674)
T ss_dssp CSS-----SCCEECCBCCCBTTHHHHCC--EEEEEECBCT
T ss_pred ccc-----cccccccccccchhhhccCC--cccceeeccc
Confidence 999 89999999999999974432 4679998754
No 90
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.04 E-value=1.3e-09 Score=132.35 Aligned_cols=116 Identities=27% Similarity=0.375 Sum_probs=93.9
Q ss_pred cccEEEEEEEEecCCCCCCCCCCCCcEEEEEECC------eEEEeeCcCC-CCCCeeee-EEEEE-eeCCCCCCCceEEE
Q 042999 14 TVRKLVVEVVDARDLLPKDGQGSSSPYVIADFDG------QRKRTSTKFR-DLNPVWNE-PLEFI-VSDPKNMDCEELEI 84 (1006)
Q Consensus 14 ~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~------~~~kT~~~~~-t~nP~wne-~f~f~-~~~~~~~~~~~L~i 84 (1006)
....|.|+|++|++|+. ..+||||+|.+.+ .+++|+++++ ++||+||| +|.|. +..++ ...|+|
T Consensus 723 ~~~~L~V~Visaq~L~~----~~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pe---la~Lrf 795 (885)
T 3ohm_B 723 VANALRVKVISGQFLSD----RKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPT---LASLRI 795 (885)
T ss_dssp CCEEEEEEEEEEESCCS----SCCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGG---GCEEEE
T ss_pred cceEEEEEEEEeccCcc----cCCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCC---cCEEEE
Confidence 45689999999999975 3689999999954 3579999975 69999999 69998 65543 347999
Q ss_pred EEEeCCCCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceecCCceeeeEEEEEEEEEEecC
Q 042999 85 EVYNDKRYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKKSVFSWIRGEIGLRIYYYDEL 149 (1006)
Q Consensus 85 ~V~d~d~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~~~~ 149 (1006)
+|||+| ++|||++.++|..| .. +.++++|.+..+..-..|.|.+.+.+.+..
T Consensus 796 ~V~D~d---------ddfiG~~~lpL~~L-~~---GyR~vpL~~~~g~~l~~atLfv~i~~~~~~ 847 (885)
T 3ohm_B 796 AAFEEG---------GKFVGHRILPVSAI-RS---GYHYVCLRNEANQPLCLPALLIYTEASDYI 847 (885)
T ss_dssp EEEETT---------TEEEEEEEEETTTC-CC---EEEEEEEECTTSCEEEEEEEEEEEEEEECC
T ss_pred EEEcCC---------ccEEeeEEEEHHHc-CC---CceEEEecCCCCCccCceEEEEEEEEEecC
Confidence 999975 48999999999985 43 356799988766655689999999998764
No 91
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.03 E-value=2.1e-09 Score=129.91 Aligned_cols=117 Identities=20% Similarity=0.257 Sum_probs=94.9
Q ss_pred CcccEEEEEEEEecCCCCCCCCCCCCcEEEEEECC-------eEEEeeCcCC-CCCCeeeeE-EEEE-eeCCCCCCCceE
Q 042999 13 FTVRKLVVEVVDARDLLPKDGQGSSSPYVIADFDG-------QRKRTSTKFR-DLNPVWNEP-LEFI-VSDPKNMDCEEL 82 (1006)
Q Consensus 13 ~~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~-------~~~kT~~~~~-t~nP~wne~-f~f~-~~~~~~~~~~~L 82 (1006)
...+.|.|+|++|++|+.+ .+||||+|.+.+ .+++|+++++ ++||+|||+ |.|. +..++ ...|
T Consensus 647 ~~~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pe---la~L 719 (816)
T 3qr0_A 647 VVAGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPD---LAVV 719 (816)
T ss_dssp SCCEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGG---GCEE
T ss_pred ccceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCC---ccEE
Confidence 3457899999999999753 689999999964 5689999875 699999998 9998 76543 3579
Q ss_pred EEEEEeCCCCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceecCCceeeeEEEEEEEEEEecC
Q 042999 83 EIEVYNDKRYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKKSVFSWIRGEIGLRIYYYDEL 149 (1006)
Q Consensus 83 ~i~V~d~d~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~~~~ 149 (1006)
+|.|||++ +++||++.++|+.+ .. +.++++|.+..+..-..++|.+.+.+.+..
T Consensus 720 rf~V~D~d---------ddfiG~~~ipL~~L-~~---GyR~vpL~~~~g~~~~~atLfv~i~~~~~~ 773 (816)
T 3qr0_A 720 RIIVSEEN---------GKFIGHRVMPLDGI-KP---GYRHVPLRNESNRPLGLASVFAHIVAKDYV 773 (816)
T ss_dssp EEEEEETT---------SCEEEEEEEESTTC-CC---EEEEEEEECTTSCEEEEEEEEEEEEEEECC
T ss_pred EEEEEecC---------CCeeeEEEEEHHHc-CC---cceEEEEeCCCCCCCCceEEEEEEEEEecC
Confidence 99999963 58999999999985 43 356899988766655668999999988765
No 92
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.00 E-value=1.1e-09 Score=133.46 Aligned_cols=113 Identities=18% Similarity=0.292 Sum_probs=88.8
Q ss_pred CCcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEE-C---C--EEEEee-cccC-CCCCeecc-EEEE-EEeCCC-cE
Q 042999 616 PPVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKY-G---K--KWVRTR-TITD-CFDPRWNE-QYTW-QVYDPC-TV 684 (1006)
Q Consensus 616 ~~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~-~---~--~~~rT~-~~~~-~~nP~wne-~~~~-~v~~~~-~~ 684 (1006)
...|.|.|+|++|++|+. +++||||+|.+ | . +.+||+ ++++ ++||+||| .|.| .|..+. ..
T Consensus 675 ~~~~~L~V~Visa~~L~~--------~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~ 746 (799)
T 2zkm_X 675 VVATTLSITVISGQFLSE--------RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELAS 746 (799)
T ss_dssp TTCEEEEEEEEEEESCCS--------SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCE
T ss_pred eeeeeEEEEEEeccccCc--------cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccE
Confidence 356899999999999963 35899999998 4 1 368999 8876 58999999 6999 786544 48
Q ss_pred EEEEEEECCCCCcCCCCCCCCceeEEEEEEcccccCCceEeeEEEeeeeccCCcccccEEEEEEEEe
Q 042999 685 LTVGVFDNWRMFADASEERPDYRIGKIRIRVSTLENNKVYTTSYPLLVLLRTGLKKMGEIELAVRFV 751 (1006)
Q Consensus 685 l~i~v~d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~~~ 751 (1006)
|.|.|||+| +++||.+.|||+.|..| .++++|.+..+... ..+.|.+.+.++
T Consensus 747 Lr~~V~D~d-----------~d~iG~~~ipl~~L~~G---~r~v~L~~~~g~~~-~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 747 LRVAVMEEG-----------NKFLGHRIIPINALNSG---YHHLCLHSESNMPL-TMPALFIFLEMK 798 (799)
T ss_dssp EEEEEEETT-----------TEEEEEEEEEGGGBCCE---EEEEEEECTTCCEE-EEEEEEEEEEEE
T ss_pred EEEEEEEeC-----------CCccceEeeehhhcCCC---cEEEeccCCCCCCC-CceEEEEEEEEE
Confidence 999999985 57999999999999876 36899976533222 237788877764
No 93
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.98 E-value=3.7e-09 Score=128.77 Aligned_cols=115 Identities=23% Similarity=0.348 Sum_probs=90.6
Q ss_pred CCcccEEEEEEEEecCCCCCCCCCCCCcEEEEEECC------eEEEee-CcC-CCCCCeeee-EEEE-EeeCCCCCCCce
Q 042999 12 QFTVRKLVVEVVDARDLLPKDGQGSSSPYVIADFDG------QRKRTS-TKF-RDLNPVWNE-PLEF-IVSDPKNMDCEE 81 (1006)
Q Consensus 12 ~~~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~~------~~~kT~-~~~-~t~nP~wne-~f~f-~~~~~~~~~~~~ 81 (1006)
.-..+.|.|+|++|++|+. +.+||||+|.+.+ ++++|+ +++ +++||+||| +|.| .+..++ ...
T Consensus 674 ~~~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~e---l~~ 746 (799)
T 2zkm_X 674 VVVATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPE---LAS 746 (799)
T ss_dssp TTTCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGG---GCE
T ss_pred ceeeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCC---ccE
Confidence 3356799999999999974 4689999999942 357999 776 569999999 7999 776543 347
Q ss_pred EEEEEEeCCCCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceecCCceeeeEEEEEEEEEE
Q 042999 82 LEIEVYNDKRYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKKSVFSWIRGEIGLRIYYY 146 (1006)
Q Consensus 82 L~i~V~d~d~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~ 146 (1006)
|+|.|||++ +++||++.++++.+ .. +..|++|.+..+..-..+.|.+++.+.
T Consensus 747 Lr~~V~D~d---------~d~iG~~~ipl~~L-~~---G~r~v~L~~~~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 747 LRVAVMEEG---------NKFLGHRIIPINAL-NS---GYHHLCLHSESNMPLTMPALFIFLEMK 798 (799)
T ss_dssp EEEEEEETT---------TEEEEEEEEEGGGB-CC---EEEEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred EEEEEEEeC---------CCccceEeeehhhc-CC---CcEEEeccCCCCCCCCceEEEEEEEEE
Confidence 999999974 48999999999986 33 356899987654444568888888764
No 94
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.94 E-value=3.4e-09 Score=128.83 Aligned_cols=112 Identities=22% Similarity=0.221 Sum_probs=89.5
Q ss_pred EEEEEEEEEeecCcccCCCCCCCCCCcEEEEEECC------ccceeeeeecCCCCCCceecc-eeeee-eccCCCCcEEE
Q 042999 455 WYLRVTVMEAQDLCIAHNLPPLTAPEIRVKAQLAL------QSARTRRGSMNNHSSSFHWHE-DVFFV-AAEPFEDSLIL 526 (1006)
Q Consensus 455 ~~L~V~v~~a~~L~~~~~~d~~~~~dpyv~v~lg~------~~~kT~~~~~~~~t~nP~w~e-~~~f~-v~~~~~~~L~v 526 (1006)
..|+|.|++|++|+. ..+||||+|.+.+ .++||++++ +++.||+||| .|.|. |..+....|+|
T Consensus 725 ~~L~V~Visaq~L~~-------~~~DPYV~V~l~g~p~D~~~k~kTkvi~--~NglNPvWnEe~F~F~~V~~pela~Lrf 795 (885)
T 3ohm_B 725 NALRVKVISGQFLSD-------RKVGIYVEVDMFGLPVDTRRKYRTRTSQ--GNSFNPVWDEEPFDFPKVVLPTLASLRI 795 (885)
T ss_dssp EEEEEEEEEEESCCS-------SCCCEEEEEEEESSTTTCBCCCCCCCCS--SCSSSCBCCCCCEEEEEESCGGGCEEEE
T ss_pred eEEEEEEEEeccCcc-------cCCCcEEEEEEeCCCcccccceeeEEee--CCCcCCeeccceeEEeeEEcCCcCEEEE
Confidence 469999999999982 2689999999954 357888764 3569999999 59998 77676678999
Q ss_pred EEEECCCCccccceeEEEEEeccccccccccCcccceEEeCcCCCCCCCccceeeeEEEEEeee
Q 042999 527 LVEDRTAKDAAAVILGHAVVPVSSIDQRIDERHVASKWFPLEGSCGRGCARSYCGRIQLKLCLE 590 (1006)
Q Consensus 527 ~V~D~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~~~~~~~~~~~~~G~l~l~v~l~ 590 (1006)
.|||++ +++||++.++|..|.. +.++++|....+ .....|.|.+.+.+.
T Consensus 796 ~V~D~d-----ddfiG~~~lpL~~L~~-------GyR~vpL~~~~g---~~l~~atLfv~i~~~ 844 (885)
T 3ohm_B 796 AAFEEG-----GKFVGHRILPVSAIRS-------GYHYVCLRNEAN---QPLCLPALLIYTEAS 844 (885)
T ss_dssp EEEETT-----TEEEEEEEEETTTCCC-------EEEEEEEECTTS---CEEEEEEEEEEEEEE
T ss_pred EEEcCC-----ccEEeeEEEEHHHcCC-------CceEEEecCCCC---CccCceEEEEEEEEE
Confidence 999987 7899999999999864 356788887654 333468888888775
No 95
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.80 E-value=4.5e-08 Score=87.60 Aligned_cols=108 Identities=14% Similarity=0.273 Sum_probs=84.1
Q ss_pred cEEEEEEEEecC--CCCCCCCCCCCcEEEEEECCe----EEEe-eCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEe
Q 042999 16 RKLVVEVVDARD--LLPKDGQGSSSPYVIADFDGQ----RKRT-STKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYN 88 (1006)
Q Consensus 16 ~~L~V~v~~a~~--L~~~~~~g~~dPyv~v~~~~~----~~kT-~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d 88 (1006)
.-|+|.+.++.- |++ .....||||.|.++.. +.+| .++++|..|+|||+|.-.+.. ++.|.|.|++
T Consensus 6 ~flRi~~~~~~~~~~~~--~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~-----Gr~l~i~Vfh 78 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQA--EDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE-----GRVIQIVLMR 78 (126)
T ss_dssp CEEEEEEEEEECSSCCC--SSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT-----TCEEEEEEEE
T ss_pred ccEEeeeccccccccCC--ccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC-----CEEEEEEEEc
Confidence 467788766553 332 2347899999999743 2465 788899999999999999888 5689999995
Q ss_pred CCCCCCCCCCCCceeEEEEEeCeeeeee----CCceeEEEEceecCCceeeeEEEEEEEEEE
Q 042999 89 DKRYCNGSGRKNHFLGRVKLCGSQFARR----GDEGLVYFPLEKKSVFSWIRGEIGLRIYYY 146 (1006)
Q Consensus 89 ~d~~~~~~~~~d~~lG~~~v~l~~l~~~----~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~ 146 (1006)
. ..+|+..|++++.+|+.. ++..+.|+.|++ .|+|++.+.|+
T Consensus 79 ~---------a~~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP-------~Gkl~~~i~~~ 124 (126)
T 1yrk_A 79 A---------AEEPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP-------QAKVLMSVQYF 124 (126)
T ss_dssp E---------TTEEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS-------SCEEEEEEEEE
T ss_pred C---------CCCeeeEEEEEHHHHHhhhccCCCceEEEEeccc-------CcEEEEEEEEe
Confidence 3 238999999999998643 445678999986 79999999886
No 96
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.73 E-value=6.8e-08 Score=87.55 Aligned_cols=114 Identities=12% Similarity=0.196 Sum_probs=87.4
Q ss_pred ccEEEEEEEEecCCCCCC-CCCCCCcEEEEEECCe----EEEe-eCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEe
Q 042999 15 VRKLVVEVVDARDLLPKD-GQGSSSPYVIADFDGQ----RKRT-STKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYN 88 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~~-~~g~~dPyv~v~~~~~----~~kT-~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d 88 (1006)
..-|+|.+.+..--+-+. .....||||.|.++.. +.+| .++++|..|+|||+|.-.+.. ++.|.|.|++
T Consensus 9 ~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~-----Gr~l~i~Vfh 83 (138)
T 2enj_A 9 SPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK-----GRVMQIIVKG 83 (138)
T ss_dssp CCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS-----SCEEEEEEEC
T ss_pred CcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC-----CeEEEEEEEc
Confidence 446788887765433221 1346899999999742 3677 777789999999999999887 5789999995
Q ss_pred CCCCCCCCCCCCceeEEEEEeCeeeeee----CCceeEEEEceecCCceeeeEEEEEEEEEEecC
Q 042999 89 DKRYCNGSGRKNHFLGRVKLCGSQFARR----GDEGLVYFPLEKKSVFSWIRGEIGLRIYYYDEL 149 (1006)
Q Consensus 89 ~d~~~~~~~~~d~~lG~~~v~l~~l~~~----~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~~~~ 149 (1006)
. ..+|+..|++++.+|+.. ++..+.|+.|++ .|+|++.+.|.-..
T Consensus 84 ~---------a~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP-------~Gkl~v~i~~~~e~ 132 (138)
T 2enj_A 84 K---------NVDLISETTVELYSLAERCRKNNGKTEIWLELKP-------QGRMLMNARYFLEM 132 (138)
T ss_dssp S---------SCSCCEEEEEESHHHHHHHHHTTTCEEEEEECBS-------SCEEEEEEEECCCS
T ss_pred C---------CCCeeeEEEEEHHHHHhhhccCCCceEEEEeccc-------CcEEEEEEEEEEec
Confidence 3 238999999999998643 455678999986 79999999997554
No 97
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.70 E-value=2e-07 Score=83.41 Aligned_cols=107 Identities=15% Similarity=0.299 Sum_probs=81.3
Q ss_pred EEEEEEEeecc--CCccCccCCCCCCCCCeEEEEEECCEE----EEe-ecccCCCCCeeccEEEEEEeCCCcEEEEEEEE
Q 042999 619 GILELGILGAR--GLLPMKTKNGGKGSTDAYCVAKYGKKW----VRT-RTITDCFDPRWNEQYTWQVYDPCTVLTVGVFD 691 (1006)
Q Consensus 619 g~L~v~v~~a~--~L~~~~~~d~~~g~sdpyv~v~~~~~~----~rT-~~~~~~~nP~wne~~~~~v~~~~~~l~i~v~d 691 (1006)
+.|+|.+.++. .|++. ....||||.|.+.... .+| .+.++|..|.||+.|.-.|.+ ...|.|.||+
T Consensus 6 ~flRi~~~~~~~~~~~~~------~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh 78 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQAE------DEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE-GRVIQIVLMR 78 (126)
T ss_dssp CEEEEEEEEEECSSCCCS------SSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT-TCEEEEEEEE
T ss_pred ccEEeeeccccccccCCc------cccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC-CEEEEEEEEc
Confidence 56777775554 33321 2358999999986433 265 777889999999999998765 4569999996
Q ss_pred CCCCCcCCCCCCCCceeEEEEEEccccc-----CCceEeeEEEeeeeccCCcccccEEEEEEEEe
Q 042999 692 NWRMFADASEERPDYRIGKIRIRVSTLE-----NNKVYTTSYPLLVLLRTGLKKMGEIELAVRFV 751 (1006)
Q Consensus 692 ~~~~~~~~~~~~~d~~lG~~~i~l~~l~-----~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~~~ 751 (1006)
.. -++++.++|++.+|. .+...+.|+.|. ..|.|++.++|-
T Consensus 79 ~a-----------~~fvAn~tV~~edL~~~c~~~~g~~e~WvdLe--------P~Gkl~~~i~~~ 124 (126)
T 1yrk_A 79 AA-----------EEPVSEVTVGVSVLAERCKKNNGKAEFWLDLQ--------PQAKVLMSVQYF 124 (126)
T ss_dssp ET-----------TEEEEEEEEEHHHHHHHHHTTTTEEEEEEECB--------SSCEEEEEEEEE
T ss_pred CC-----------CCeeeEEEEEHHHHHhhhccCCCceEEEEecc--------cCcEEEEEEEEe
Confidence 42 379999999999997 456778999995 359999999874
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.61 E-value=2.1e-07 Score=84.32 Aligned_cols=109 Identities=14% Similarity=0.194 Sum_probs=82.1
Q ss_pred cEEEEEEEeeccC--CccCccCCCCCCCCCeEEEEEECCEE----EEe-ecccCCCCCeeccEEEEEEeCCCcEEEEEEE
Q 042999 618 VGILELGILGARG--LLPMKTKNGGKGSTDAYCVAKYGKKW----VRT-RTITDCFDPRWNEQYTWQVYDPCTVLTVGVF 690 (1006)
Q Consensus 618 ~g~L~v~v~~a~~--L~~~~~~d~~~g~sdpyv~v~~~~~~----~rT-~~~~~~~nP~wne~~~~~v~~~~~~l~i~v~ 690 (1006)
-+.|+|.+.++.- |++.. .-..||||.|.+.... .+| .+.++|..|.||+.|.-.|.+ ...|.|.||
T Consensus 9 ~~flRi~l~~~~~~~~~~~~-----~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~-Gr~l~i~Vf 82 (138)
T 2enj_A 9 SPFLRIGLSNFDCGSCQSCQ-----GEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK-GRVMQIIVK 82 (138)
T ss_dssp CCCEEEEEEEEECCCCCCSC-----CCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS-SCEEEEEEE
T ss_pred CcceEEEeeccccCCCCCcc-----cccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC-CeEEEEEEE
Confidence 3567777766553 32211 2358999999986432 577 677789999999999988755 456999999
Q ss_pred ECCCCCcCCCCCCCCceeEEEEEEccccc-----CCceEeeEEEeeeeccCCcccccEEEEEEEEe
Q 042999 691 DNWRMFADASEERPDYRIGKIRIRVSTLE-----NNKVYTTSYPLLVLLRTGLKKMGEIELAVRFV 751 (1006)
Q Consensus 691 d~~~~~~~~~~~~~d~~lG~~~i~l~~l~-----~~~~~~~~~~L~~~~~~g~~~~G~l~l~~~~~ 751 (1006)
+.. -+|++.++|++.+|. .+...+.|+.|. ..|+|++.++|.
T Consensus 83 h~a-----------~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLe--------P~Gkl~v~i~~~ 129 (138)
T 2enj_A 83 GKN-----------VDLISETTVELYSLAERCRKNNGKTEIWLELK--------PQGRMLMNARYF 129 (138)
T ss_dssp CSS-----------CSCCEEEEEESHHHHHHHHHTTTCEEEEEECB--------SSCEEEEEEEEC
T ss_pred cCC-----------CCeeeEEEEEHHHHHhhhccCCCceEEEEecc--------cCcEEEEEEEEE
Confidence 532 379999999999997 455678999995 359999999995
No 99
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=84.58 E-value=11 Score=37.43 Aligned_cols=79 Identities=10% Similarity=0.130 Sum_probs=50.4
Q ss_pred CCCcccEEEEEEEEecCCCCCCCCCCCCcEEEEEEC---------------C----eEEEeeCcCCCCCCeeeeEEEEEe
Q 042999 11 QQFTVRKLVVEVVDARDLLPKDGQGSSSPYVIADFD---------------G----QRKRTSTKFRDLNPVWNEPLEFIV 71 (1006)
Q Consensus 11 ~~~~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~~---------------~----~~~kT~~~~~t~nP~wne~f~f~~ 71 (1006)
|......|.|++.++. +.........|--|.+.+. + ..++|.+...+.+|.|+|++.+.+
T Consensus 22 Pgd~RNdLYVtl~~g~-F~~~~k~~aRNIeV~vevr~~~G~~i~~~I~~~sg~~~~se~~S~V~YHnk~P~w~EtIKi~L 100 (220)
T 3l4c_A 22 PGDVRNDIYVTLVQGD-FDKGSKTTAKNVEVTVSVYDEDGKRLEHVIFPGAGDEAISEYKSVIYYQVKQPRWFETVKVAI 100 (220)
T ss_dssp ----CEEEEEEEEEEE-CCCSSSSSCCCEEEEEEEEETTSCBCCSCEECTTCCSCBSCEECCCCTTCSSCCCCEEEEEEE
T ss_pred CCCCcccEEEEeeEeE-ECCCCCCCcceEEEEEEEEcCCCCCcccCEEcCCCCCCceeEEEEEEEcCCCCCceEeEEEee
Confidence 4556677888888874 3221112233444544441 1 237888888999999999999998
Q ss_pred eCCCCCCCceEEEEEEeCCC
Q 042999 72 SDPKNMDCEELEIEVYNDKR 91 (1006)
Q Consensus 72 ~~~~~~~~~~L~i~V~d~d~ 91 (1006)
..... ....|.|.+++...
T Consensus 101 P~~~~-~~~HLlFtFrH~S~ 119 (220)
T 3l4c_A 101 PIEDV-NRSHLRFTFRHRSS 119 (220)
T ss_dssp CTTSS-TTEEEEEEEEECCC
T ss_pred Chhhc-CCeEEEEEEEEecc
Confidence 87432 36789999988653
No 100
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=78.80 E-value=5.7 Score=49.23 Aligned_cols=93 Identities=13% Similarity=0.114 Sum_probs=59.6
Q ss_pred EEEEEEEEeecCcccCCCCCCCCCCcEEEEEE--CCccceeeeeecCCCCCCceecceeeeeec---cCCCCcEEEEEEE
Q 042999 456 YLRVTVMEAQDLCIAHNLPPLTAPEIRVKAQL--ALQSARTRRGSMNNHSSSFHWHEDVFFVAA---EPFEDSLILLVED 530 (1006)
Q Consensus 456 ~L~V~v~~a~~L~~~~~~d~~~~~dpyv~v~l--g~~~~kT~~~~~~~~t~nP~w~e~~~f~v~---~~~~~~L~v~V~D 530 (1006)
.++|+|+.+.++.. +.....+.||++.+ |++.....+.+......+|.|||-+.|.+. -|....|.|+||+
T Consensus 356 ~f~v~i~~~~~~n~----~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 356 ALRIKILCATYVNV----NIRDIDKIYVRTGIYHGGEPLCDNVNTQRVPCSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp EEEEEEEEESCCCC----CCSSCCCCCEEEEEESSSCSSCCEECCCCCCTTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CEEEEEEEecCCCC----CccccceEEEEEEEEECCEEccCceeccccCCCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 38999999988864 23345688998887 664432211111124567889999888753 4556789999998
Q ss_pred CCCCcc---ccceeEEEEEeccccc
Q 042999 531 RTAKDA---AAVILGHAVVPVSSID 552 (1006)
Q Consensus 531 ~~~~~~---~d~~lG~~~i~l~~l~ 552 (1006)
....++ ....||.+.++|-+..
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCTT
T ss_pred ecCccCcccccceeEEeeeeeEccC
Confidence 764210 2457888888876543
No 101
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=76.94 E-value=8.9 Score=35.94 Aligned_cols=126 Identities=12% Similarity=0.169 Sum_probs=79.3
Q ss_pred CCCcEEEEEEEeeccCCccCccCCCCCCCCCeEEEEEEC--C-EEEEeecccCCCCCeeccEEEEEEeCC--------Cc
Q 042999 615 KPPVGILELGILGARGLLPMKTKNGGKGSTDAYCVAKYG--K-KWVRTRTITDCFDPRWNEQYTWQVYDP--------CT 683 (1006)
Q Consensus 615 ~~~~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v~~~--~-~~~rT~~~~~~~nP~wne~~~~~v~~~--------~~ 683 (1006)
.+.-+.++++|.++. |-+.- -.. .+..+|++-+.+. . +..-|.++ ...+|.+|.+-.+.|... ..
T Consensus 14 ~~gEnlfEihi~~~~-~~~~~-l~~-~~d~~p~tF~t~dF~dfEtq~Tpv~-~G~~p~y~fts~Y~V~~d~~fl~yL~~~ 89 (156)
T 2yrb_A 14 ERGENLFEIHINKVT-FSSEV-LQA-SGDKEPVTFCTYAFYDFELQTTPVV-RGLHPEYNFTSQYLVHVNDLFLQYIQKN 89 (156)
T ss_dssp CSSCEEEEEEEEEEC-CCHHH-HHH-HCSSCCEEEEEECSTTCCCEECCCE-ESSSCCCCEEEEEEECCSHHHHHHHHHC
T ss_pred cCCCcEEEEEEeEEE-EcHHH-Hhh-ccccCCcEEEEEEEeceEeeecccc-cCCCCCcceEEEEEEEeCHHHHHHHhcC
Confidence 346778889888876 21100 000 2335666555553 3 44445544 489999998888887421 23
Q ss_pred EEEEEEEECCCCCcCCCCCCCCceeEEEEEEcccccCC-ceEeeEEEeeeeccCCcccccEEEEEEEEecC
Q 042999 684 VLTVGVFDNWRMFADASEERPDYRIGKIRIRVSTLENN-KVYTTSYPLLVLLRTGLKKMGEIELAVRFVCP 753 (1006)
Q Consensus 684 ~l~i~v~d~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~-~~~~~~~~L~~~~~~g~~~~G~l~l~~~~~~~ 753 (1006)
.+.|++..... ..-..||.+.|+|.++... .......+|.+... +....|+|++.+++..+
T Consensus 90 ~l~lELhqa~g--------~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g-~~~~~G~LeywiRL~~P 151 (156)
T 2yrb_A 90 TITLEVHQAYS--------TEYETIAACQLKFHEILEKSGRIFCTASLIGTKG-DIPNFGTVEYWFRLRVS 151 (156)
T ss_dssp CEEEEEEEECS--------SCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSS-CCTTSEEEEEEEEEEEC
T ss_pred CEEEEEEEeeC--------CCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCC-CcceEEEEEEEEEEecc
Confidence 68888887532 2567999999999998633 32345557765322 11346999999999854
No 102
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=75.44 E-value=6.4 Score=36.89 Aligned_cols=129 Identities=9% Similarity=0.051 Sum_probs=84.5
Q ss_pred CcccEEEEEEEEecCCCCCC--CCCCCCcEEEEEEC--C-eEEEeeCcCCCCCCeeeeEEEEEeeCCCC----CCCceEE
Q 042999 13 FTVRKLVVEVVDARDLLPKD--GQGSSSPYVIADFD--G-QRKRTSTKFRDLNPVWNEPLEFIVSDPKN----MDCEELE 83 (1006)
Q Consensus 13 ~~~~~L~V~v~~a~~L~~~~--~~g~~dPyv~v~~~--~-~~~kT~~~~~t~nP~wne~f~f~~~~~~~----~~~~~L~ 83 (1006)
...+.+.|+|.++. |.+.. ..+..+|..-+.++ . +.+.|.+.. ..+|.+|-+-.|.+.-... +....+.
T Consensus 15 ~gEnlfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~ 92 (156)
T 2yrb_A 15 RGENLFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTIT 92 (156)
T ss_dssp SSCEEEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEE
T ss_pred CCCcEEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEE
Confidence 34578899999886 32211 02345787666664 3 556677665 8899999999888754210 1245788
Q ss_pred EEEEeCCCCCCCCCCCCceeEEEEEeCeeeeeeCCceeEEEEceecCCceeeeEEEEEEEEEEecC
Q 042999 84 IEVYNDKRYCNGSGRKNHFLGRVKLCGSQFARRGDEGLVYFPLEKKSVFSWIRGEIGLRIYYYDEL 149 (1006)
Q Consensus 84 i~V~d~d~~~~~~~~~d~~lG~~~v~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~~~~~ 149 (1006)
++++.... +.-..||.+.|++..++..........+|.........-|.+.+.+++...-
T Consensus 93 lELhqa~g------~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL~~Pi 152 (156)
T 2yrb_A 93 LEVHQAYS------TEYETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRLRVSG 152 (156)
T ss_dssp EEEEEECS------SCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEEEECC
T ss_pred EEEEEeeC------CCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEEeccc
Confidence 88887532 2567999999999998866554444556764433113468988888876543
No 103
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=75.33 E-value=8.3 Score=47.46 Aligned_cols=87 Identities=14% Similarity=0.126 Sum_probs=56.5
Q ss_pred EEEEEEEEeecCcccCCCCCCCCCCcEEEEEE--CCccc----eeeeeecCCCCCCceecceeeeeec---cCCCCcEEE
Q 042999 456 YLRVTVMEAQDLCIAHNLPPLTAPEIRVKAQL--ALQSA----RTRRGSMNNHSSSFHWHEDVFFVAA---EPFEDSLIL 526 (1006)
Q Consensus 456 ~L~V~v~~a~~L~~~~~~d~~~~~dpyv~v~l--g~~~~----kT~~~~~~~~t~nP~w~e~~~f~v~---~~~~~~L~v 526 (1006)
.++|.|..+.++... +..+.||++.+ |++.. .|+.+. ...+|.|||-+.|.+. -|....|.|
T Consensus 218 ~f~i~i~~~~~~~~~------~~~~~~V~~~l~~g~~~l~~~~~T~~~~---~~~~~~Wne~l~f~i~i~dLPr~a~L~~ 288 (940)
T 2wxf_A 218 PFSIELIEGRKVNAD------ERMKLVVQAGLFHGNEMLCKTVSSSEVN---VCSEPVWKQRLEFDISVCDLPRMARLCF 288 (940)
T ss_dssp EEEEEEEEEECCCC---------CEEEEEEEEEETTEESSCCEECCCEE---SCSSCEEEEEEEEEEEGGGCCTTCEEEE
T ss_pred ceEEEEEEecccCCC------CCceEEEEEEEEECCEEccCceeccccc---CCCCcccceEEEcccccccCCcccEEEE
Confidence 499999999998742 35688988776 65433 233222 4678999999888753 455678999
Q ss_pred EEEECCCC--c---------cccceeEEEEEecccc
Q 042999 527 LVEDRTAK--D---------AAAVILGHAVVPVSSI 551 (1006)
Q Consensus 527 ~V~D~~~~--~---------~~d~~lG~~~i~l~~l 551 (1006)
.||+.... + .....||.+.++|-+.
T Consensus 289 ti~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 289 ALYAVVEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EEEEEC----------------CEEEEEEEEESBCT
T ss_pred EEEEecCCccCccccccccccccceEEEEeeeEECC
Confidence 99995321 0 0134777777776543
No 104
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=72.48 E-value=14 Score=45.40 Aligned_cols=74 Identities=19% Similarity=0.222 Sum_probs=53.2
Q ss_pred cccEEEEEEEEecCCCCCCCCCCCCcEEEEEE--CCe----EEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEE
Q 042999 14 TVRKLVVEVVDARDLLPKDGQGSSSPYVIADF--DGQ----RKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVY 87 (1006)
Q Consensus 14 ~~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~--~~~----~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~ 87 (1006)
....+.|+|..+.++... ...+-||.+.+ |++ ...|+.+.-..+|.|||.+.|++.-........|.|.||
T Consensus 215 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 291 (940)
T 2wxf_A 215 LEQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALY 291 (940)
T ss_dssp CCSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred cCCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEE
Confidence 346799999999998543 35677888766 443 255655555778999999999987644444778999999
Q ss_pred eCC
Q 042999 88 NDK 90 (1006)
Q Consensus 88 d~d 90 (1006)
+..
T Consensus 292 ~~~ 294 (940)
T 2wxf_A 292 AVV 294 (940)
T ss_dssp EEC
T ss_pred Eec
Confidence 953
No 105
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=68.27 E-value=21 Score=44.29 Aligned_cols=95 Identities=18% Similarity=0.146 Sum_probs=60.2
Q ss_pred ccEEEEEEEEecCCCCCCCCCCCCcEEEEEE--CCe----EEEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEe
Q 042999 15 VRKLVVEVVDARDLLPKDGQGSSSPYVIADF--DGQ----RKRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYN 88 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~--~~~----~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d 88 (1006)
...+.|+|..+.++.. +.....+-||.+.+ |++ ..+|+.+. ..+|.|||.+.|++.-........|.|.||+
T Consensus 354 ~~~f~v~i~~~~~~n~-~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNV-NIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCC-CCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCC-CccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 3578999999998853 22334678888877 432 34454443 5678899999999866443447799999998
Q ss_pred CCCCCCCCCCCCceeEEEEEeCee
Q 042999 89 DKRYCNGSGRKNHFLGRVKLCGSQ 112 (1006)
Q Consensus 89 ~d~~~~~~~~~d~~lG~~~v~l~~ 112 (1006)
..... +.......||.+.+++-+
T Consensus 432 ~~~~~-~~~~~~~~lg~~n~~lfd 454 (1091)
T 3hhm_A 432 VKGRK-GAKEEHCPLAWGNINLFD 454 (1091)
T ss_dssp CCCCC--------CCEEEEEESBC
T ss_pred ecCcc-CcccccceeEEeeeeeEc
Confidence 65431 000123467776666554
No 106
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=63.55 E-value=9.3 Score=47.66 Aligned_cols=73 Identities=19% Similarity=0.172 Sum_probs=53.3
Q ss_pred ccEEEEEEEEecCCCCCCCCCCCCcEEEEEE--CCeE----EEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEe
Q 042999 15 VRKLVVEVVDARDLLPKDGQGSSSPYVIADF--DGQR----KRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYN 88 (1006)
Q Consensus 15 ~~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~--~~~~----~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d 88 (1006)
...+.|+|..+.++... ...+-||.+.+ |++. .+|+.+.-..+|.|||.+.|++.-........|.|.||+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 36799999999998543 35677777555 5433 445555557789999999999877554457899999999
Q ss_pred CC
Q 042999 89 DK 90 (1006)
Q Consensus 89 ~d 90 (1006)
..
T Consensus 429 ~~ 430 (1092)
T 2y3a_A 429 VL 430 (1092)
T ss_dssp C-
T ss_pred ec
Confidence 64
No 107
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=61.47 E-value=19 Score=44.44 Aligned_cols=91 Identities=18% Similarity=0.120 Sum_probs=54.0
Q ss_pred EEEEEEEeecCcccCCCCCCCCCCcEEEEEE--CCccceeeeeecCCCCCCceecceeeeeec---cCCCCcEEEEEEEC
Q 042999 457 LRVTVMEAQDLCIAHNLPPLTAPEIRVKAQL--ALQSARTRRGSMNNHSSSFHWHEDVFFVAA---EPFEDSLILLVEDR 531 (1006)
Q Consensus 457 L~V~v~~a~~L~~~~~~d~~~~~dpyv~v~l--g~~~~kT~~~~~~~~t~nP~w~e~~~f~v~---~~~~~~L~v~V~D~ 531 (1006)
++|.|+.+..... ..+..++.||++.+ |++.......+.+.-+.+|.|||-+.|.+. -|....|.|.||+.
T Consensus 220 f~i~i~~~~~~~~----~~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 295 (961)
T 1e7u_A 220 FRVKIRGIDIPVL----PRTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 295 (961)
T ss_dssp EEEEEEEEECSSC----CTTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred eEEEEeecccccc----cCCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEec
Confidence 7888888765221 12335688988766 664332211111124667999998888753 45567899999985
Q ss_pred CCCc---------------cccceeEEEEEecccc
Q 042999 532 TAKD---------------AAAVILGHAVVPVSSI 551 (1006)
Q Consensus 532 ~~~~---------------~~d~~lG~~~i~l~~l 551 (1006)
...+ .+...||.+.++|-+.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 296 AKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp EC--------------------CEEEEEEEESBCT
T ss_pred ccCccccccccccccccccccceeEEEEeeeeecC
Confidence 4211 0234677777776554
No 108
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=61.09 E-value=25 Score=43.39 Aligned_cols=74 Identities=23% Similarity=0.241 Sum_probs=49.0
Q ss_pred cEEEEEEEEecCCCCCCCCCCCCcEEEEEE--CCeE---EEeeCcCCCCCCeeeeEEEEEeeCCCCCCCceEEEEEEeCC
Q 042999 16 RKLVVEVVDARDLLPKDGQGSSSPYVIADF--DGQR---KRTSTKFRDLNPVWNEPLEFIVSDPKNMDCEELEIEVYNDK 90 (1006)
Q Consensus 16 ~~L~V~v~~a~~L~~~~~~g~~dPyv~v~~--~~~~---~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~L~i~V~d~d 90 (1006)
..++|.|..+....... +..++-||.+.+ |++. .+|+.+.-+.+|.|||.+.|.+.-........|.|.||+..
T Consensus 218 ~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 56888899887522111 224567887765 4433 34444445668999999999876644444778999999854
No 109
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=52.69 E-value=42 Score=33.33 Aligned_cols=59 Identities=8% Similarity=0.037 Sum_probs=40.2
Q ss_pred EEEEeecccCCCCCeeccEEEEEEeC---CCcEEEEEEEECCCCCcCCCCCCCCceeEEEEEEcc
Q 042999 655 KWVRTRTITDCFDPRWNEQYTWQVYD---PCTVLTVGVFDNWRMFADASEERPDYRIGKIRIRVS 716 (1006)
Q Consensus 655 ~~~rT~~~~~~~nP~wne~~~~~v~~---~~~~l~i~v~d~~~~~~~~~~~~~d~~lG~~~i~l~ 716 (1006)
..++|.+...+.+|.|+|++.+.+.. ....|.++++.-..-. +. ......+|-+-+||-
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~--k~-dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQD--SK-DKSEKIFALAFVKLM 138 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCS--SC-CCCCCEEEEEEEESB
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccc--cc-cccCCeeEEEEEEcc
Confidence 35788888999999999999888764 4568999998754311 00 002346676666654
No 110
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=51.56 E-value=14 Score=46.22 Aligned_cols=94 Identities=14% Similarity=0.184 Sum_probs=58.3
Q ss_pred cEEEEEEEeeccCCccCccCCCCCCCCCeEEEE--EECCEEE----EeecccCCCCCeeccEEEEEEeC----CCcEEEE
Q 042999 618 VGILELGILGARGLLPMKTKNGGKGSTDAYCVA--KYGKKWV----RTRTITDCFDPRWNEQYTWQVYD----PCTVLTV 687 (1006)
Q Consensus 618 ~g~L~v~v~~a~~L~~~~~~d~~~g~sdpyv~v--~~~~~~~----rT~~~~~~~nP~wne~~~~~v~~----~~~~l~i 687 (1006)
...++|+|+.+.++.. ...++-||.+ ..|++.. .|..+.-..+|.|||-+.|++.- ..+.|.|
T Consensus 352 ~~~f~i~i~~~~~~~~-------~~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ 424 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNT-------EETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCF 424 (1092)
T ss_dssp CSEEEEEECCCCCCCC-------CSSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEE
T ss_pred CCCEEEEEEEeccCCC-------CCCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEE
Confidence 3589999999999954 2346777654 4476643 45555446789999999998753 3568999
Q ss_pred EEEECCCCCcCC---------------CCCCCCceeEEEEEEcccc
Q 042999 688 GVFDNWRMFADA---------------SEERPDYRIGKIRIRVSTL 718 (1006)
Q Consensus 688 ~v~d~~~~~~~~---------------~~~~~d~~lG~~~i~l~~l 718 (1006)
+||+......+. +....+..||.+.++|=+-
T Consensus 425 ti~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 470 (1092)
T 2y3a_A 425 AVYAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDF 470 (1092)
T ss_dssp ECCCC------------------------------CCEEEEESBCT
T ss_pred EEEEecCccccccccccccccccccccccccccceeEEEeeeeECC
Confidence 999864221000 0001234899999988653
No 111
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=30.20 E-value=1.1e+02 Score=25.73 Aligned_cols=39 Identities=15% Similarity=0.264 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHhHhhhccccCchhHH
Q 042999 935 RYDRLRMLAARVQTVLGDFATQGERVQALVSWRDPRATK 973 (1006)
Q Consensus 935 ~~~~l~~~~~~vQ~~l~~~a~~~e~i~~~~~w~~p~~t~ 973 (1006)
+++.|.+-...++.....+.....+++.-+-|++-+...
T Consensus 34 kL~~L~~kt~~L~~~s~~F~~~A~~l~rkmwwkn~K~~i 72 (91)
T 3hd7_A 34 KLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMMI 72 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444445555666666666777778888888866543
Done!