Query 043003
Match_columns 855
No_of_seqs 293 out of 905
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 20:47:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043003.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043003hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kmv_A Alpha-L-arabinofuranosi 99.8 9.7E-19 3.3E-23 171.7 10.1 110 722-838 8-121 (157)
2 1wd3_A Alpha-L-arabinofuranosi 99.8 9.4E-20 3.2E-24 202.1 1.1 148 687-851 296-453 (482)
3 3kmv_A Alpha-L-arabinofuranosi 99.6 7.9E-15 2.7E-19 144.0 12.2 109 694-820 36-150 (157)
4 3akh_A Putative secreted alpha 99.1 9.1E-11 3.1E-15 134.6 9.4 123 713-843 311-437 (468)
5 2ahf_A Unsaturated glucuronyl 99.1 2.7E-09 9.1E-14 119.2 20.6 235 169-436 44-317 (377)
6 2zzr_A Unsaturated glucuronyl 99.1 3.1E-09 1.1E-13 119.2 21.2 235 169-437 70-343 (397)
7 1wd3_A Alpha-L-arabinofuranosi 99.0 4.4E-10 1.5E-14 125.2 10.4 143 656-818 324-481 (482)
8 3akh_A Putative secreted alpha 98.9 3.4E-09 1.2E-13 121.5 11.5 132 664-818 322-459 (468)
9 2gz6_A N-acetyl-D-glucosamine 98.9 3.4E-08 1.1E-12 109.6 16.9 276 169-456 55-356 (388)
10 3k7x_A LIN0763 protein; Q92DQ0 98.8 6.4E-08 2.2E-12 107.0 17.4 179 170-371 49-247 (349)
11 3k7x_A LIN0763 protein; Q92DQ0 98.7 1.1E-07 3.9E-12 105.0 13.2 187 229-433 43-242 (349)
12 3pmm_A Putative cytoplasmic pr 98.6 1.4E-07 5E-12 105.4 13.5 231 170-443 71-335 (382)
13 3gt5_A N-acetylglucosamine 2-e 98.5 2.6E-06 9E-11 95.5 17.8 268 169-455 54-361 (402)
14 2gz6_A N-acetyl-D-glucosamine 98.3 2.3E-06 7.9E-11 94.8 13.1 193 169-370 117-337 (388)
15 1nc5_A Hypothetical protein YT 98.3 1.6E-06 5.6E-11 96.4 11.6 234 170-439 44-313 (373)
16 3gt5_A N-acetylglucosamine 2-e 98.3 8.1E-06 2.8E-10 91.6 15.3 194 170-370 116-343 (402)
17 2zbl_A Putative isomerase; N-a 98.3 2.3E-05 7.8E-10 88.4 18.9 272 169-456 53-368 (421)
18 3k11_A Putative glycosyl hydro 98.2 1.2E-05 4.2E-10 91.3 14.0 305 103-443 20-367 (445)
19 2ahf_A Unsaturated glucuronyl 98.0 0.00012 4.3E-09 81.6 18.8 243 167-421 87-366 (377)
20 1fp3_A N-acyl-D-glucosamine 2- 98.0 6.3E-05 2.2E-09 83.8 14.7 275 169-455 58-365 (402)
21 3pmm_A Putative cytoplasmic pr 97.9 7.7E-05 2.6E-09 83.4 13.9 165 184-370 23-203 (382)
22 2zzr_A Unsaturated glucuronyl 97.9 0.00019 6.7E-09 80.5 16.0 241 169-422 115-392 (397)
23 1nc5_A Hypothetical protein YT 97.8 0.00012 4.1E-09 81.3 13.6 171 254-448 13-186 (373)
24 2zbl_A Putative isomerase; N-a 97.8 0.00012 4.3E-09 82.4 12.5 193 170-370 114-349 (421)
25 1fp3_A N-acyl-D-glucosamine 2- 97.6 0.00034 1.1E-08 78.0 12.5 189 169-371 124-348 (402)
26 3h7l_A Endoglucanase; dehydrog 97.5 0.0014 4.9E-08 76.6 16.0 253 186-457 190-497 (586)
27 3k11_A Putative glycosyl hydro 96.5 0.0081 2.8E-07 68.3 10.8 174 185-369 29-236 (445)
28 1nxc_A Mannosyl-oligosaccharid 96.5 0.014 4.8E-07 66.8 12.3 199 238-443 110-346 (478)
29 1ks8_A Endo-B-1,4-glucanase; c 96.1 0.22 7.4E-06 56.4 19.3 237 185-456 89-351 (433)
30 1dl2_A Class I alpha-1,2-manno 95.8 0.067 2.3E-06 61.8 13.7 237 173-433 55-344 (511)
31 3e6u_A LANC-like protein 1; al 95.8 0.029 9.9E-07 63.0 10.5 191 170-371 168-369 (411)
32 1ia6_A Cellulase CEL9M; cellul 95.4 0.67 2.3E-05 52.5 19.7 239 186-456 92-355 (441)
33 1x9d_A Endoplasmic reticulum m 95.1 0.15 5.3E-06 59.0 13.4 197 238-443 174-408 (538)
34 1tf4_A T. fusca endo/EXO-cellu 94.5 0.92 3.1E-05 53.5 18.3 178 185-370 90-292 (605)
35 3e6u_A LANC-like protein 1; al 94.3 0.22 7.4E-06 55.9 11.7 133 169-318 229-366 (411)
36 2xfg_A Endoglucanase 1; hydrol 94.1 2.2 7.4E-05 48.7 19.7 174 185-370 111-313 (466)
37 1g87_A Endocellulase 9G; endog 94.0 2.3 7.9E-05 50.2 20.2 174 185-370 90-290 (614)
38 1nxc_A Mannosyl-oligosaccharid 93.8 0.12 4.3E-06 59.1 8.6 197 177-382 183-412 (478)
39 1hcu_A Alpha-1,2-mannosidase; 93.7 0.35 1.2E-05 55.8 12.1 188 238-433 105-336 (503)
40 2ri9_A Mannosyl-oligosaccharid 93.1 0.7 2.4E-05 52.9 13.3 188 238-433 92-323 (475)
41 1x9d_A Endoplasmic reticulum m 92.1 0.7 2.4E-05 53.6 11.7 194 178-382 246-479 (538)
42 1dl2_A Class I alpha-1,2-manno 91.0 0.91 3.1E-05 52.4 11.1 194 178-379 184-434 (511)
43 2ri9_A Mannosyl-oligosaccharid 90.8 0.9 3.1E-05 52.0 10.8 195 178-382 173-414 (475)
44 3gzk_A Cellulase; fold from GH 90.6 1.2 4E-05 51.8 11.6 125 186-317 188-334 (537)
45 2g0d_A Nisin biosynthesis prot 89.0 6.3 0.00022 43.4 15.7 184 173-364 140-352 (409)
46 1hcu_A Alpha-1,2-mannosidase; 88.7 1.4 4.9E-05 50.7 10.2 195 178-382 187-433 (503)
47 1clc_A Endoglucanase CELD; EC: 86.1 1.8 6E-05 51.4 9.3 201 111-316 123-377 (639)
48 1ut9_A Cellulose 1,4-beta-cell 86.0 2.8 9.7E-05 49.3 11.0 126 186-316 227-381 (609)
49 2yik_A Endoglucanase; hydrolas 85.6 2.7 9.3E-05 49.5 10.5 128 185-316 151-306 (611)
50 2g0d_A Nisin biosynthesis prot 85.0 7.6 0.00026 42.8 13.3 135 170-315 205-353 (409)
51 2v8i_A Pectate lyase; periplas 81.5 2.9 9.8E-05 47.2 7.8 70 241-315 381-454 (543)
52 3h7l_A Endoglucanase; dehydrog 81.2 5.7 0.0002 46.5 10.7 120 173-313 254-389 (586)
53 2kll_A Interleukin-33; beta-tr 74.0 60 0.002 30.5 15.0 88 693-784 43-133 (161)
54 2v8i_A Pectate lyase; periplas 72.1 11 0.00038 42.6 9.1 86 170-268 376-461 (543)
55 1ia6_A Cellulase CEL9M; cellul 53.5 32 0.0011 38.7 8.8 123 170-315 211-336 (441)
56 1ks8_A Endo-B-1,4-glucanase; c 50.3 36 0.0012 38.2 8.5 121 171-316 214-335 (433)
57 1tf4_A T. fusca endo/EXO-cellu 44.0 1E+02 0.0034 36.2 11.2 131 237-378 216-366 (605)
58 1g87_A Endocellulase 9G; endog 42.4 1.2E+02 0.0041 35.6 11.5 132 238-378 215-363 (614)
59 1r76_A Pectate lyase; A-helica 41.6 4.1E+02 0.014 29.6 15.0 92 169-268 151-257 (408)
60 2yug_A Protein FRG1; spliceoso 40.6 2E+02 0.0068 27.5 10.9 88 674-784 34-126 (155)
61 1gxm_A Pectate lyase; mechanis 38.1 98 0.0033 33.6 9.0 92 169-268 76-181 (332)
62 2xfg_A Endoglucanase 1; hydrol 35.1 1.2E+02 0.0039 34.5 9.5 132 238-378 237-386 (466)
63 1w6k_A Lanosterol synthase; cy 34.4 77 0.0026 38.0 8.4 112 155-269 440-571 (732)
64 2wry_A IL-1 beta, interleukin- 33.6 27 0.00093 34.1 3.5 39 756-799 110-148 (162)
65 1md6_A Interleukin 1 family, m 33.0 26 0.00089 34.0 3.2 29 769-799 107-135 (154)
66 2w87_A Esterase D, XYL-CBM35; 29.0 1.4E+02 0.0049 27.7 7.7 38 538-577 40-78 (139)
67 1ilt_A Interleukin-1 receptor 28.1 35 0.0012 33.0 3.2 30 769-800 108-137 (152)
68 2nvh_A IL-1 beta, interleukin- 26.6 29 0.00098 33.6 2.3 30 768-799 108-137 (153)
69 2ila_A Interleukin-1 alpha; cy 25.8 28 0.00095 33.8 2.0 27 768-798 114-140 (155)
70 1r76_A Pectate lyase; A-helica 24.9 1.2E+02 0.0041 33.8 7.1 97 168-268 214-326 (408)
71 2w3j_A Carbohydrate binding mo 24.5 1.8E+02 0.006 27.3 7.4 38 538-577 40-78 (145)
72 3gzk_A Cellulase; fold from GH 23.9 1.5E+02 0.005 34.3 7.9 76 345-432 251-332 (537)
73 2w47_A Lipolytic enzyme, G-D-S 23.6 2.3E+02 0.008 26.1 8.1 38 538-577 41-79 (144)
74 3ltq_A Interleukin-1 beta; lan 22.3 56 0.0019 32.2 3.4 29 768-798 126-154 (171)
No 1
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum}
Probab=99.76 E-value=9.7e-19 Score=171.68 Aligned_cols=110 Identities=21% Similarity=0.324 Sum_probs=96.8
Q ss_pred CcceecCCCCCCCcceecccCCcceEEecC---CCCceEEEeecCCCCC-CeEEEeecCCCCeEEEeccccCCCceEEEe
Q 043003 722 SKQVMFEPFDFPGKLLMQQGNNDSLVIANN---PGNSVFQVNAGLDGKP-DTVSLESVSRKGCFVFSDVNLKAGTALKLN 797 (855)
Q Consensus 722 g~~v~lepfd~Pg~~v~~~~~~~~l~v~~~---~~~s~f~~vpgl~g~~-~~vsles~~~pg~~~~~~~~~~~g~~~~~~ 797 (855)
++.|+||+++.||+||||+ +..++++.+ .+|++|+|||||++++ |+|||||+++||+|||+ .|..|+|+
T Consensus 8 ~~~vsl~S~n~p~~ylRh~--~~~~~~~~~~~~~~datF~vvpGLa~~~~g~VSfES~n~Pg~yLRh-----~~~~l~L~ 80 (157)
T 3kmv_A 8 ITKAKFQSYNYPNMYIRHA--NFDARIDENVTPEMDSQWELVPGLANSGDGYVSIQSVNYPGYYLRH-----SNYDLSLE 80 (157)
T ss_dssp --CBEEEESSSTTCEEEEE--TTEEEEESSCSSGGGGCEEEEECSSCCSTTEEEEEESSSTTEEEEE-----ETTEEEEE
T ss_pred CccEEEEecCCCCcEEEEe--CCeEEEccCCCCccCceEEEeCCcCCCCCCEEEEEECCCCCcEEEE-----eCCEEEEe
Confidence 4589999999999999995 555666543 4899999999998765 89999999999999998 38899999
Q ss_pred ecCCCcccccccceecccCccccCcceEEEecCCCceeccc
Q 043003 798 CQQPDDGFKQAASFVMQKGISQYHPISFLAKGSNRNYLLAP 838 (855)
Q Consensus 798 ~~~~~~~f~~~asf~~~~gl~~~~~~sf~a~g~~~~~l~~p 838 (855)
+.++++.|+++|+|...+||++..++||++...++.||..=
T Consensus 81 ~~~~s~~f~~dATF~~~~GLa~~~~vSfeS~n~Pg~yLrh~ 121 (157)
T 3kmv_A 81 KNDGTSLFAESATFKIVPGLADPSYISFQSYNFPTRYIRHY 121 (157)
T ss_dssp ECCSCHHHHHTTCEEEEECSSCTTSEEEEESSSTTEEEEEE
T ss_pred ccCCCCCccCCceEEEccCccCCCcEEEEEEcCCCeEEEEE
Confidence 98888899999999999999999999999999999999873
No 2
>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A*
Probab=99.75 E-value=9.4e-20 Score=202.11 Aligned_cols=148 Identities=16% Similarity=0.202 Sum_probs=123.9
Q ss_pred eecCCCCCCCcceEEEEEEcCCCCCcccccccccCCcceecCCCC--CCCcceecccCCcceEEec--C------CCCce
Q 043003 687 EPWPAAGTGGDANATFRLIGNDQRPINFTTVKNVISKQVMFEPFD--FPGKLLMQQGNNDSLVIAN--N------PGNSV 756 (855)
Q Consensus 687 ~~~~~~g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~lepfd--~Pg~~v~~~~~~~~l~v~~--~------~~~s~ 756 (855)
..+|.++||.++||+||.+...+.+ ....|.-..+..|+||+.+ .|+++||| .+..++|+. + ..+++
T Consensus 296 ~~~Psd~Td~aVqAnivAa~y~~~s-~~s~pgLa~g~~VSLrs~s~n~PgrYLRH--~~~~vrL~~V~s~sSa~~k~DAT 372 (482)
T 1wd3_A 296 SGYPSDDTENSVQENIVAAKYVVGS-LVSGPSFTSGEVVSLRVTTPGYTTRYIAH--TDTTVNTQVVDDDSSTTLKEEAS 372 (482)
T ss_dssp SSCCCHHHHHHHHHHHHHHCEEECC-CCCSSCCCTTCEEEEEECSTTCTTEEEEE--ETTEEEEEECCTTSCHHHHHHTC
T ss_pred ecCCChHHHHHHhhceeeeeccCCc-cccCCccccCceEEEEECcCCCCCeEEEE--cCCcEEEEecccCCCccccccee
Confidence 3468899999999999865322222 3344666788999999998 99999999 566666642 2 26899
Q ss_pred EEEeecCCCCCCeEEEeecCCCCeEEEeccccCCCceEEEeecCCCcccccccceecccCccccCcceEEEecCCCceec
Q 043003 757 FQVNAGLDGKPDTVSLESVSRKGCFVFSDVNLKAGTALKLNCQQPDDGFKQAASFVMQKGISQYHPISFLAKGSNRNYLL 836 (855)
Q Consensus 757 f~~vpgl~g~~~~vsles~~~pg~~~~~~~~~~~g~~~~~~~~~~~~~f~~~asf~~~~gl~~~~~~sf~a~g~~~~~l~ 836 (855)
|++||||++ +++|||||.++||+|||+ .+.+|+|+..++++.|+++|+|.+.+||++++ +||++.+
T Consensus 373 F~VVpGLAd-~g~VSFES~n~PG~YLRH-----~n~~LrL~~~DgS~~FrqDATF~~~~GL~~~g-vSFeS~n------- 438 (482)
T 1wd3_A 373 WTVVTGLAN-SQCFSFESVDTPGSYIRH-----YNFELLLNANDGTKQFHEDATFCPQAALNGEG-TSLRSWS------- 438 (482)
T ss_dssp EEEEECSSC-TTSEEEEESSSTTEEEEE-----ETTEEEEEECCCCHHHHHHTCEEEEECTTSSS-EEEEESS-------
T ss_pred EEEeccccC-CCeEEEEecCCCCceEEE-----eCCEEEEecCCCCcccccCceeEeccCCCCCc-eeEEEEC-------
Confidence 999999998 799999999999999998 37799999877788999999999999999988 9999998
Q ss_pred cccccccccceEEEE
Q 043003 837 APLLSFRDESYSVYF 851 (855)
Q Consensus 837 ~pl~~~~~~~~~~~~ 851 (855)
.|...||++.|++|-
T Consensus 439 ~PgrYLRH~n~~Lyl 453 (482)
T 1wd3_A 439 YPTRYFRHYENVLYA 453 (482)
T ss_dssp STTCEEEEETTEEEE
T ss_pred CCCcEEEEeCCEEEE
Confidence 777778899999986
No 3
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum}
Probab=99.58 E-value=7.9e-15 Score=143.99 Aligned_cols=109 Identities=18% Similarity=0.275 Sum_probs=87.2
Q ss_pred CCCcceEEEEEEcCCCCCcccccccccCCcceecCCCCCCCcceecccCCcceEEecC------CCCceEEEeecCCCCC
Q 043003 694 TGGDANATFRLIGNDQRPINFTTVKNVISKQVMFEPFDFPGKLLMQQGNNDSLVIANN------PGNSVFQVNAGLDGKP 767 (855)
Q Consensus 694 ~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~lepfd~Pg~~v~~~~~~~~l~v~~~------~~~s~f~~vpgl~g~~ 767 (855)
....-+|+||++++-.++ .+-.|+||+.+.||.||+| .++.|+|+.+ ..|++|.+||||++ +
T Consensus 36 ~~~~~datF~vvpGLa~~---------~~g~VSfES~n~Pg~yLRh--~~~~l~L~~~~~s~~f~~dATF~~~~GLa~-~ 103 (157)
T 3kmv_A 36 VTPEMDSQWELVPGLANS---------GDGYVSIQSVNYPGYYLRH--SNYDLSLEKNDGTSLFAESATFKIVPGLAD-P 103 (157)
T ss_dssp CSSGGGGCEEEEECSSCC---------STTEEEEEESSSTTEEEEE--ETTEEEEEECCSCHHHHHTTCEEEEECSSC-T
T ss_pred CCCccCceEEEeCCcCCC---------CCCEEEEEECCCCCcEEEE--eCCEEEEeccCCCCCccCCceEEEccCccC-C
Confidence 345778999999553333 1137999999999999999 6777777543 27899999999998 7
Q ss_pred CeEEEeecCCCCeEEEeccccCCCceEEEeecCCCcccccccceecccCcccc
Q 043003 768 DTVSLESVSRKGCFVFSDVNLKAGTALKLNCQQPDDGFKQAASFVMQKGISQY 820 (855)
Q Consensus 768 ~~vsles~~~pg~~~~~~~~~~~g~~~~~~~~~~~~~f~~~asf~~~~gl~~~ 820 (855)
|.|||||.++||||||+ .|..|+|+|. +++.|+++|+|.+.+|..+-
T Consensus 104 ~~vSfeS~n~Pg~yLrh-----~~~~l~l~~~-~t~~fr~dATF~~~~~~~~~ 150 (157)
T 3kmv_A 104 SYISFQSYNFPTRYIRH-----YNYLLRLDEI-VTELDRQDATFKIISEDTQL 150 (157)
T ss_dssp TSEEEEESSSTTEEEEE-----ETTEEEEEEC-CSHHHHHHTCEEEEC-----
T ss_pred CcEEEEEEcCCCeEEEE-----ECCEEEEecC-CCchhccCCeEEEecCcchh
Confidence 99999999999999998 3779999998 78899999999999997653
No 4
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A*
Probab=99.11 E-value=9.1e-11 Score=134.57 Aligned_cols=123 Identities=24% Similarity=0.324 Sum_probs=106.3
Q ss_pred ccccccccCCcceecCCCCCCCcceecccCCcceEEecC---CCCceEEEeecCCCCCCeEEEeecCCCCeEEEeccccC
Q 043003 713 NFTTVKNVISKQVMFEPFDFPGKLLMQQGNNDSLVIANN---PGNSVFQVNAGLDGKPDTVSLESVSRKGCFVFSDVNLK 789 (855)
Q Consensus 713 ~~~~p~~~~g~~v~lepfd~Pg~~v~~~~~~~~l~v~~~---~~~s~f~~vpgl~g~~~~vsles~~~pg~~~~~~~~~~ 789 (855)
.+..|...+.+.+++++.+.||.+|+| .+..|+|+.+ ..+++|++||||.+ +++|||||.++||.|||+ .
T Consensus 311 ~~~~~~~~g~~~~s~~s~~~pg~ylrh--~~~~v~l~~~~~~~~d~tf~~~~gl~~-~~~~s~~s~~ypg~~lr~-~--- 383 (468)
T 3akh_A 311 NFGIPVADGVTPVRFSSYNYPDRYIRH--WDFRARIEANVTNLADSQFRVVTGLAG-SGTISLESANYPGYYLRH-K--- 383 (468)
T ss_dssp ECCCCCCSEECCBCEEESSSTTCEEEE--ETTEEEEESSCSSGGGGCEEEEECTTC-TTCEEEEESSSTTEEEEE-E---
T ss_pred EeccccccCccccccccccccccEEEE--ecCcEEEccCCCCcccceEEEccCCCC-CceEEEEEEeCCCeEEEE-E---
Confidence 566677777788899999999999999 5667888754 37999999999987 599999999999999998 3
Q ss_pred CCceEEEeecCCCcccccccceecccCcccc-CcceEEEecCCCceecccccccc
Q 043003 790 AGTALKLNCQQPDDGFKQAASFVMQKGISQY-HPISFLAKGSNRNYLLAPLLSFR 843 (855)
Q Consensus 790 ~g~~~~~~~~~~~~~f~~~asf~~~~gl~~~-~~~sf~a~g~~~~~l~~pl~~~~ 843 (855)
+..|+|+..++++.|+++|+|.+.+||++- ..+||+....+..||.+==++|+
T Consensus 384 -~~~~~~~~~~~~~~~~~~atf~~~~g~~~~~~~~s~~s~~~p~~~lr~~~~~l~ 437 (468)
T 3akh_A 384 -NYEVWVEKNDGSSAFKNDASFSRRAGLADSADGIAFESYNYPGRYLRHYENLLR 437 (468)
T ss_dssp -TTEEEEEECCSCHHHHHHTCEEEEECSSCTTTCEEEEESSSTTEEEEEETTEEE
T ss_pred -CCEEEEecCCCCccccCCCcEEEecCcCCCcCcEEEEeecCCceEEEEeCCeEE
Confidence 568999987777899999999999999997 89999999999999986555444
No 5
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=99.11 E-value=2.7e-09 Score=119.18 Aligned_cols=235 Identities=11% Similarity=0.092 Sum_probs=149.3
Q ss_pred hhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhCCCcccccCCchhhhhhhccccccccchhhHHHHHHHHHHHHH
Q 043003 169 LGHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYTL 248 (855)
Q Consensus 169 ~Gh~LsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~~~~~~r~~~l~~~w~pyy~~HkI~aGLld~Y~~ 248 (855)
.|.|.-.+.++|..|+|+++++.+....+.|.+.-.+ . +++ +.|. .+-+++.++...|+.
T Consensus 44 ~GF~~g~lw~~ye~Tgd~~~~~~a~~~~~~l~~~~~~--~--~~~-------------~~HD---~Gf~~~~s~~~~y~l 103 (377)
T 2ahf_A 44 DGFWSGILWLCYEYTGDEQYREGAVRTVASFRERLDR--F--ENL-------------DHHN---IGFLYSLSAKAQWIV 103 (377)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTT--T--TTC-------------CBST---HHHHHHTTHHHHHHH
T ss_pred cchHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhc--c--cCC-------------CCCC---chHhhHHHHHHHHHH
Confidence 4999999999999999999999999998888754220 0 000 1121 122233345679999
Q ss_pred hCChhHHHHHHHHHHHHHHHhhhhhhccchhhhccccc-cc-ccc-------hHHHHHHHHHhcCCHHHHHHHHhccc--
Q 043003 249 ANNGQALNITIWMADYFNTRVQNLIARSSLERHYQTLN-DE-SGG-------MNDVLYKLYGITKDPKHLKLAELFDK-- 317 (855)
Q Consensus 249 TG~~kaL~ia~r~AD~~~~r~~~~~~~~~~~~~~~~l~-~E-~GG-------mneaL~~LY~~TGd~ryL~LA~~F~~-- 317 (855)
|||+++++++.+.|+++..|+.+. ....++|..+. .+ .|- |..+|++.+++|||++|++.|....+
T Consensus 104 tg~~~~~~~~~~aA~~L~~r~~~~---~g~i~sw~~~~~~~~~~~~iID~mmni~~L~~A~~~~gd~~y~~~A~~~a~~~ 180 (377)
T 2ahf_A 104 EKDESARKLALDAADVLMRRWRAD---AGIIQAWGPKGDPENGGRIIIDCLLNLPLLLWAGEQTGDPEYRRVAEAHALKS 180 (377)
T ss_dssp HCCHHHHHHHHHHHHHHHTTEETT---TTEECCBSSTTCTTTTTEEEGGGGGGHHHHHHHHHHHCCTHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHhCCCC---CCeEEeccCCCCCCCCceEEechHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999999999999999999998742 11224453221 11 111 33589999999999999999987321
Q ss_pred -cc------------cccccccccC----CCCCCccc-----CcchHhHHHHHHHHHhCChHHHHHHHHHHHHhcccCeE
Q 043003 318 -PC------------FLGLLAVKAD----NIAGLHAN-----THIPLVCGVQNRYELTGDEQSMAMGTFFMDIINSSHSY 375 (855)
Q Consensus 318 -~~------------~~~~la~~~d----~l~g~Han-----thiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~~~Y 375 (855)
.. .+|+.. |.. ...|.+.. .+.-.+.|++.+|+.|+|++|++.++..-+.+.++ .
T Consensus 181 l~~~~r~dgs~~h~~~~D~~t-G~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~yL~~A~~la~~~l~~-~- 257 (377)
T 2ahf_A 181 RRFLVRGDDSSYHTFYFDPEN-GNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADLLETAKRMARHFLAR-V- 257 (377)
T ss_dssp HHHTBBTTSCBCSEEEECTTT-CCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT-C-
T ss_pred HHhCcCCCCCeEEEEEeeCCC-CCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHHHHHHh-h-
Confidence 11 122211 110 11222211 13556789999999999999999999888887753 2
Q ss_pred eecCCCCCCCCCC-CccccccCCcCccccchhhHHHHHHHHHHccCC-----cchHHHHHHHHHhhh
Q 043003 376 ATGGTSHQEFWTD-PKRIATALSAETEESCTTYNMLKVSRYLFKWTK-----QVTYADYYERALTNG 436 (855)
Q Consensus 376 ~TGG~g~~E~f~~-~~~l~~~l~~~~~ETCat~nmlkl~~~Lf~~tg-----d~~YaD~~ERaLyN~ 436 (855)
.-.|+. +|.- ...++....+..+-.+++.+++++++. ++ +.+|.+..|+++-.-
T Consensus 258 ~~d~~p---ywd~~~~~~~~~~~d~Sa~aiaA~~Ll~L~~~----~~~~~~~~~~Y~~~A~~~l~~l 317 (377)
T 2ahf_A 258 PEDGVV---YWDFEVPQEPSSYRDSSASAITACGLLEIASQ----LDESDPERQRFIDAAKTTVTAL 317 (377)
T ss_dssp CTTSSC---BSBTTSCCCTTSCBCHHHHHHHHHHHHHHHHT----SCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhCCc---ccccCCCccCCCccCCCHHHHHHHHHHHHHHh----cCccccchHHHHHHHHHHHHHH
Confidence 221211 2211 111222111334556777888877754 54 678999999887543
No 6
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=99.10 E-value=3.1e-09 Score=119.24 Aligned_cols=235 Identities=13% Similarity=0.108 Sum_probs=148.9
Q ss_pred hhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhCCCcccccCCchhhhhhhccccccccchhhHHHHHHHHHHHHH
Q 043003 169 LGHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYTL 248 (855)
Q Consensus 169 ~Gh~LsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~~~~~~r~~~l~~~w~pyy~~HkI~aGLld~Y~~ 248 (855)
.|.|...+.++|..|+|+++++.++...+.|.+.-.+ . +. .+.|. .|-+++..+...|+.
T Consensus 70 ~GF~~G~lw~~ye~Tgd~~~~~~a~~~~~~l~~~~~~--~--~~-------------~~~HD---~GF~~~~s~~~~y~l 129 (397)
T 2zzr_A 70 NGFWTGCLWLAYEYNQDKKLKNIAHKNVLSFLNRINN--R--IA-------------LDHHD---LGFLYTPSCTAEYRI 129 (397)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHT--T--CS-------------CCSST---HHHHHTTTHHHHHHH
T ss_pred cchHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhhh--c--cc-------------CCCCC---chHHHHHHHHHHHHH
Confidence 4999999999999999999999999999888764331 0 00 01121 111222234579999
Q ss_pred hCChhHHHHHHHHHHHHHHHhhhhhhccchhhhccccc-cccc------chH-HHHHHHHHhcCCHHHHHHHHhccc---
Q 043003 249 ANNGQALNITIWMADYFNTRVQNLIARSSLERHYQTLN-DESG------GMN-DVLYKLYGITKDPKHLKLAELFDK--- 317 (855)
Q Consensus 249 TG~~kaL~ia~r~AD~~~~r~~~~~~~~~~~~~~~~l~-~E~G------Gmn-eaL~~LY~~TGd~ryL~LA~~F~~--- 317 (855)
|||+++++++.+.|+++..|+.+. ....++|.... ...+ .|| .+|++.+++|||++|++.|....+
T Consensus 130 tg~~~~~~~~~~aA~~L~~r~~~~---~g~iqsw~~~~~~~~~~~iID~~mni~~L~~A~~~~gd~~y~~~A~~ha~~~l 206 (397)
T 2zzr_A 130 NGDVKALEATIKAADKLMERYQEK---GGFIQAWGELGYKEHYRLIIDCLLNIQLLFFAYEQTGDEKYRQVAVNHFYASA 206 (397)
T ss_dssp HCCHHHHHHHHHHHHHHHTTEETT---TTEECCSSSTTCGGGCEEETTHHHHTHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHHhCcC---CCEEEecccCCCCCCCceeechHhHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999542 11224453211 1111 144 588999999999999999985321
Q ss_pred ccc------------ccccccccC----CCCCCccc-----CcchHhHHHHHHHHHhCChHHHHHHHHHHHHhcccCeEe
Q 043003 318 PCF------------LGLLAVKAD----NIAGLHAN-----THIPLVCGVQNRYELTGDEQSMAMGTFFMDIINSSHSYA 376 (855)
Q Consensus 318 ~~~------------~~~la~~~d----~l~g~Han-----thiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~~~Y~ 376 (855)
... +++.. |.. ...|.+.. .+.-.+.|++.+|+.|+|++|++.|+..-+.+.++ . .
T Consensus 207 ~~~~r~dgs~~h~~~~d~~~-G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A~~la~~~l~~-~-~ 283 (397)
T 2zzr_A 207 NNVVRDDSSAFHTFYFDPET-GEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNR-L-P 283 (397)
T ss_dssp HHTBCTTSCBCSEEEECTTT-CCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHT-C-C
T ss_pred HhCcCCCCCeEEEEEeeCCC-CCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHh-h-H
Confidence 111 22111 110 11222211 24566789999999999999999999888887753 3 2
Q ss_pred ecCCCCCCCC--CCCccccccCCcCccccchhhHHHHHHHHHHccCCc---ch--HHHHHHHHHhhhh
Q 043003 377 TGGTSHQEFW--TDPKRIATALSAETEESCTTYNMLKVSRYLFKWTKQ---VT--YADYYERALTNGV 437 (855)
Q Consensus 377 TGG~g~~E~f--~~~~~l~~~l~~~~~ETCat~nmlkl~~~Lf~~tgd---~~--YaD~~ERaLyN~i 437 (855)
-.|+. +| ..|. ++....+..+-.+++.++++++ +++++ .+ |.+..|++|-.-+
T Consensus 284 ~d~~p---ywdt~~~~-~~~~~~D~Sa~aiaA~~Ll~L~----~~~~~~~~~~~~Y~~~A~~~l~~l~ 343 (397)
T 2zzr_A 284 EDKVS---YWDLIFTD-GSGQPRDTSATATAVCGIHEML----KYLPEVDPDKETYKYAMHTMLRSLI 343 (397)
T ss_dssp TTSCC---BSBTTCCT-TSCCCBCHHHHHHHHHHHHHHH----TTSCTTCTTHHHHHHHHHHHHHHHH
T ss_pred HhCCc---cccCCCCC-CCCCcCCCCHHHHHHHHHHHHH----HhcCccchhhHHHHHHHHHHHHHHH
Confidence 22221 22 2221 2222223455667777887776 44565 67 9999998875433
No 7
>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A*
Probab=99.04 E-value=4.4e-10 Score=125.23 Aligned_cols=143 Identities=18% Similarity=0.261 Sum_probs=107.3
Q ss_pred cCCCCCCcceEEeecc-CCceEEEe-eCCceEEeecCC-CCCCCcceEEEEEEcCCCCCcccccccccCCcceecCCCCC
Q 043003 656 IPASYNAGLVTFSQKS-GNSSLVLM-KNQSVTIEPWPA-AGTGGDANATFRLIGNDQRPINFTTVKNVISKQVMFEPFDF 732 (855)
Q Consensus 656 ~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~-~g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~lepfd~ 732 (855)
.|.......++|.-.+ +...++|. .++.+.++.... ......-+|+|+++..-.++ ..|+||..+.
T Consensus 324 ~pgLa~g~~VSLrs~s~n~PgrYLRH~~~~vrL~~V~s~sSa~~k~DATF~VVpGLAd~-----------g~VSFES~n~ 392 (482)
T 1wd3_A 324 GPSFTSGEVVSLRVTTPGYTTRYIAHTDTTVNTQVVDDDSSTTLKEEASWTVVTGLANS-----------QCFSFESVDT 392 (482)
T ss_dssp SSCCCTTCEEEEEECSTTCTTEEEEEETTEEEEEECCTTSCHHHHHHTCEEEEECSSCT-----------TSEEEEESSS
T ss_pred CCccccCceEEEEECcCCCCCeEEEEcCCcEEEEecccCCCcccccceeEEEeccccCC-----------CeEEEEecCC
Confidence 4555556778885554 34445666 777776766432 22334668999998542222 4689999999
Q ss_pred CCcceecccCCcceEEecCC------CCceEEEeecCCCCCCeEEEeecCCCCeEEEeccccCCCceEEEee------cC
Q 043003 733 PGKLLMQQGNNDSLVIANNP------GNSVFQVNAGLDGKPDTVSLESVSRKGCFVFSDVNLKAGTALKLNC------QQ 800 (855)
Q Consensus 733 Pg~~v~~~~~~~~l~v~~~~------~~s~f~~vpgl~g~~~~vsles~~~pg~~~~~~~~~~~g~~~~~~~------~~ 800 (855)
||.|||| .++.|+|+... .|+.|++++||.+ +| |||||.+.||.|||+ . +..|.|.. -+
T Consensus 393 PG~YLRH--~n~~LrL~~~DgS~~FrqDATF~~~~GL~~-~g-vSFeS~n~PgrYLRH-~----n~~Lyla~~gg~~~~d 463 (482)
T 1wd3_A 393 PGSYIRH--YNFELLLNANDGTKQFHEDATFCPQAALNG-EG-TSLRSWSYPTRYFRH-Y----ENVLYAASNGGVQTFD 463 (482)
T ss_dssp TTEEEEE--ETTEEEEEECCCCHHHHHHTCEEEEECTTS-SS-EEEEESSSTTCEEEE-E----TTEEEEECSSCSSGGG
T ss_pred CCceEEE--eCCEEEEecCCCCcccccCceeEeccCCCC-Cc-eeEEEECCCCcEEEE-e----CCEEEEecCCCccccc
Confidence 9999999 78899996542 6999999999988 56 999999999999998 3 66899943 23
Q ss_pred CCcccccccceecccCcc
Q 043003 801 PDDGFKQAASFVMQKGIS 818 (855)
Q Consensus 801 ~~~~f~~~asf~~~~gl~ 818 (855)
+.+.|++++||+...|++
T Consensus 464 ~t~~f~~DaTF~v~~pwA 481 (482)
T 1wd3_A 464 SKTSFNNDVSFEIETAFA 481 (482)
T ss_dssp CSTTHHHHTCEEEEECTT
T ss_pred CcccccCCceEEeccCCC
Confidence 577899999999998876
No 8
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A*
Probab=98.91 E-value=3.4e-09 Score=121.55 Aligned_cols=132 Identities=21% Similarity=0.271 Sum_probs=96.6
Q ss_pred ceEEeeccCCceEEEeeCCceEEeecCCCCCCCcceEEEEEEcCCCCCcccccccccCCcceecCCCCCCCcceecccCC
Q 043003 664 LVTFSQKSGNSSLVLMKNQSVTIEPWPAAGTGGDANATFRLIGNDQRPINFTTVKNVISKQVMFEPFDFPGKLLMQQGNN 743 (855)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~lepfd~Pg~~v~~~~~~ 743 (855)
.+++....-...|..-.+++|.++. .++ ...+++||++..-.++ ..++||..+.||.+||| +|
T Consensus 322 ~~s~~s~~~pg~ylrh~~~~v~l~~---~~~-~~~d~tf~~~~gl~~~-----------~~~s~~s~~ypg~~lr~--~~ 384 (468)
T 3akh_A 322 PVRFSSYNYPDRYIRHWDFRARIEA---NVT-NLADSQFRVVTGLAGS-----------GTISLESANYPGYYLRH--KN 384 (468)
T ss_dssp CBCEEESSSTTCEEEEETTEEEEES---SCS-SGGGGCEEEEECTTCT-----------TCEEEEESSSTTEEEEE--ET
T ss_pred ccccccccccccEEEEecCcEEEcc---CCC-CcccceEEEccCCCCC-----------ceEEEEEEeCCCeEEEE--EC
Confidence 4455433323345443556666653 223 3679999988332222 45899999999999999 89
Q ss_pred cceEEecCC------CCceEEEeecCCCCCCeEEEeecCCCCeEEEeccccCCCceEEEeecCCCcccccccceecccCc
Q 043003 744 DSLVIANNP------GNSVFQVNAGLDGKPDTVSLESVSRKGCFVFSDVNLKAGTALKLNCQQPDDGFKQAASFVMQKGI 817 (855)
Q Consensus 744 ~~l~v~~~~------~~s~f~~vpgl~g~~~~vsles~~~pg~~~~~~~~~~~g~~~~~~~~~~~~~f~~~asf~~~~gl 817 (855)
..|+|+... +|+.|++||||++..+.|||||.+.||.|||+ . +..|+|+.. +++.|+++|+|....++
T Consensus 385 ~~~~~~~~~~~~~~~~~atf~~~~g~~~~~~~~s~~s~~~p~~~lr~-~----~~~l~~~~~-~~~~~~~~atf~~~~~~ 458 (468)
T 3akh_A 385 YEVWVEKNDGSSAFKNDASFSRRAGLADSADGIAFESYNYPGRYLRH-Y----ENLLRIQPV-STALDRQDATFYAEKLA 458 (468)
T ss_dssp TEEEEEECCSCHHHHHHTCEEEEECSSCTTTCEEEEESSSTTEEEEE-E----TTEEEEEEC-CSHHHHHHTCEEECC--
T ss_pred CEEEEecCCCCccccCCCcEEEecCcCCCcCcEEEEeecCCceEEEE-e----CCeEEEccC-CCchhcccceeeeccch
Confidence 999996432 78999999999884489999999999999997 3 668999974 46789999999998885
Q ss_pred c
Q 043003 818 S 818 (855)
Q Consensus 818 ~ 818 (855)
.
T Consensus 459 ~ 459 (468)
T 3akh_A 459 A 459 (468)
T ss_dssp -
T ss_pred h
Confidence 4
No 9
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=98.86 E-value=3.4e-08 Score=109.60 Aligned_cols=276 Identities=8% Similarity=-0.036 Sum_probs=155.0
Q ss_pred hhHHHHHHHHHHHh-CCChHHHHHHHHHHHHHHHH-HhhCCCcccccCCchhhhhhhccccccccchhhHHHHHHHHHHH
Q 043003 169 LGHYLSATAMAWAS-TRNETVKQKMDAVMSVLSEC-QKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQY 246 (855)
Q Consensus 169 ~Gh~LsA~A~~~a~-t~D~~L~~k~d~~Vd~L~~~-Q~~~~DGYL~a~~~~~~~r~~~l~~~w~pyy~~HkI~aGLld~Y 246 (855)
-|.-+.++|.+|.. ++|+++++.++..++.|.+. +.. +.|+..+...+- +.+...-..|-... +..||..+|
T Consensus 55 nar~i~~~a~a~~~~~~~~~~~~~A~~~~~~l~~~~~~~-~Gg~~~~~d~dg----~~~~~~~~~~~~af-~i~al~~~y 128 (388)
T 2gz6_A 55 QNRQVWTFSMLCNQLEKRENWLKIARNGAKFLAQHGRDD-EGNWYFALTRGG----EPLVQPYNIFSDCF-AAMAFSQYA 128 (388)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHSBCT-TSCBCSEECTTS----CBCCCCCCHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCC-CCCEEEEEcCCC----CcccCCcchHHHHH-HHHHHHHHH
Confidence 57788899999998 89999999999999999987 442 235555432110 00000011222233 445688999
Q ss_pred HHhCChhHHHHHHHHHHHHHHHhhhhhhccchh--hhcccccc-c-ccchHHHHHHHHHhcCCHHHHHHHHhccc---cc
Q 043003 247 TLANNGQALNITIWMADYFNTRVQNLIARSSLE--RHYQTLND-E-SGGMNDVLYKLYGITKDPKHLKLAELFDK---PC 319 (855)
Q Consensus 247 ~~TG~~kaL~ia~r~AD~~~~r~~~~~~~~~~~--~~~~~l~~-E-~GGmneaL~~LY~~TGd~ryL~LA~~F~~---~~ 319 (855)
++||++++|+.|.++++++.+++... .++-.. ..+..... . ..-+.++|.+||++|||++|++.|+...+ ..
T Consensus 129 ~~tg~~~~l~~A~~~~~~i~~~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~all~l~~~t~d~~~~~~A~~~~~~~~~~ 207 (388)
T 2gz6_A 129 LASGEEWAKDVAMQAYNNVLRRKDNP-KGKYTKTYPGTRPMKALAVPMILANLTLEMEWLLPQETLENVLAATVQEVMGD 207 (388)
T ss_dssp HHHCCHHHHHHHHHHHHHHHTC---------------CCCCEETHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred HHhCCHHHHHHHHHHHHHHHHHhcCC-CcccCcccCCCCCCCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999876421 011000 00000000 0 00134688999999999999999987642 12
Q ss_pred ccccccc-------ccCC-CCCCcccCcchH--h---HHHHHHHHHhCChHHHHHHHHHHHHhcccCeEe-ecCCCCCCC
Q 043003 320 FLGLLAV-------KADN-IAGLHANTHIPL--V---CGVQNRYELTGDEQSMAMGTFFMDIINSSHSYA-TGGTSHQEF 385 (855)
Q Consensus 320 ~~~~la~-------~~d~-l~g~HanthiP~--~---~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~~~Y~-TGG~g~~E~ 385 (855)
|.++-.. ..+. +.....+...|. + .-+.+.+++|||+.|++.|+..++.+.++-.-. +||.-..-.
T Consensus 208 ~~~~~~g~~~e~~~~~w~~~~~~~~~~~~pgh~~e~a~lL~~~~~~tgd~~~~~~A~~~~~~~~~~g~d~~~Gg~~~~~~ 287 (388)
T 2gz6_A 208 FLDQEQGLMYENVAPDGSHIDCFEGRLINPGHGIEAMWFIMDIARRKNDSKTINQAVDVVLNILNFAWDNEYGGLYYFMD 287 (388)
T ss_dssp TEETTTTEECSEECTTSCCCCSTTTTEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHBCTTTCSBCSCEE
T ss_pred HhccCCCeEEEEECCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhccCCCCCEEEeec
Confidence 2221100 0000 000001112222 1 124566899999999999888777764321111 244321100
Q ss_pred CCCCccccccCCcCccccchhhHHHHHHHHHHccCCcchHHHHHHHHH---hhhhcccCCCCCCCeEEEecCCC
Q 043003 386 WTDPKRIATALSAETEESCTTYNMLKVSRYLFKWTKQVTYADYYERAL---TNGVLGIQRGTEPGVMIYMLPLS 456 (855)
Q Consensus 386 f~~~~~l~~~l~~~~~ETCat~nmlkl~~~Lf~~tgd~~YaD~~ERaL---yN~iLa~q~~~d~g~~~Y~~PL~ 456 (855)
+. ......+.....-.+.....+.-.-.+++.|||.+|.+.++++. +++++- +.+++-|.+.++-+
T Consensus 288 ~~--g~~~~~~~~~~~~~W~qae~i~a~~~ly~~tgd~~yl~~a~~~~~~~~~~~~D---~~~G~w~~~l~~~g 356 (388)
T 2gz6_A 288 AA--GHPPQQLEWDQKLWWVHLESLVALAMGYRLTGRDACWAWYQKMHDYSWQHFAD---PEYGEWFGYLNRRG 356 (388)
T ss_dssp TT--SCCCSCTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHBC---TTTSSBCCEECTTS
T ss_pred CC--CCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcC---CCCCceEEeeCCCc
Confidence 10 00000001123334556677777888899999999999998854 344433 32445566666544
No 10
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=98.82 E-value=6.4e-08 Score=107.04 Aligned_cols=179 Identities=11% Similarity=0.084 Sum_probs=116.8
Q ss_pred hHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhCCCcccccCCchhhhhhhccccccccchhhHHHHHHHHHHHHHh
Q 043003 170 GHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYTLA 249 (855)
Q Consensus 170 Gh~LsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~~~~~~r~~~l~~~w~pyy~~HkI~aGLld~Y~~T 249 (855)
++.+.++...|..|+|+++++.+.+.++.+... . .+.+++.+. +.. .| .++ +++++|++|
T Consensus 49 a~~~~~l~d~~~~tgd~~y~~~a~~~~~~~~~~-~--~~~~~~~~~----DD~-----a~-------~~l-a~~~aye~t 108 (349)
T 3k7x_A 49 AHLVEVRLDAYLRTKKQADLEVAEKTYLHNKNR-N--GGTLIHDFY----DDM-----LW-------NAL-AAYRLYKAT 108 (349)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-T--TSSSCCSBH----HHH-----HH-------HHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc-C--CCCCCccCc----cHH-----HH-------HHH-HHHHHHHHH
Confidence 556788999999999999999999988877652 2 222222221 111 11 233 577999999
Q ss_pred CChhHHHHHHHHHHHH-HHHhhhhhhccchhhhccccc------ccccchHHHHHHHHHhcCCHHHHHHHHhccc---cc
Q 043003 250 NNGQALNITIWMADYF-NTRVQNLIARSSLERHYQTLN------DESGGMNDVLYKLYGITKDPKHLKLAELFDK---PC 319 (855)
Q Consensus 250 G~~kaL~ia~r~AD~~-~~r~~~~~~~~~~~~~~~~l~------~E~GGmneaL~~LY~~TGd~ryL~LA~~F~~---~~ 319 (855)
|+++.|++|.+.++++ ..++.+...+ .-.|..-. .-.|.+..++++||++|||++||+.|++..+ ..
T Consensus 109 ~~~~yL~~A~~l~~~l~~~~wd~~~gG---Gi~W~~~~~~~knaisN~~~~~~la~l~~~tgd~~Yl~~A~~~~~w~~~~ 185 (349)
T 3k7x_A 109 GKSIYLEDAQLVWQDLVDTGWNDIMGG---GFAWRRPQMYYKNTPVNAPFIILSCWLYNELNETKYLEWAMKTYEWQTKV 185 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHHTBCSGGGS---CBEEETTEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHhCCCCCCCC---ceEecCCCccccchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999 6665432111 11232110 0112356789999999999999999987532 12
Q ss_pred cccc-------cccc-cCCCC--CCcccCcchHhHHHHHHHHHhCChHHHHHHHHHHHHhcc
Q 043003 320 FLGL-------LAVK-ADNIA--GLHANTHIPLVCGVQNRYELTGDEQSMAMGTFFMDIINS 371 (855)
Q Consensus 320 ~~~~-------la~~-~d~l~--g~HanthiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~ 371 (855)
++++ +... ..... ..++..+--.+.|++.+|+.|||++|++.++...+.+.+
T Consensus 186 l~d~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a~~l~~~~~~ 247 (349)
T 3k7x_A 186 LVREDGFVEDGINRLEDGTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTANKTAAISLK 247 (349)
T ss_dssp HBCTTSCBCCEECTTSSSCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCeEecCCccCCCCccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Confidence 2222 1100 00000 122222333567899999999999999999999998764
No 11
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=98.66 E-value=1.1e-07 Score=105.05 Aligned_cols=187 Identities=14% Similarity=0.059 Sum_probs=115.9
Q ss_pred cccchhhHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHhhh-hhhccchhhhcccccccccchHHHHHHHHHhcCCHH
Q 043003 229 WAPYYTIHKIMAGLLDQYTLANNGQALNITIWMADYFNTRVQN-LIARSSLERHYQTLNDESGGMNDVLYKLYGITKDPK 307 (855)
Q Consensus 229 w~pyy~~HkI~aGLld~Y~~TG~~kaL~ia~r~AD~~~~r~~~-~~~~~~~~~~~~~l~~E~GGmneaL~~LY~~TGd~r 307 (855)
|--|++.|.+ .+|+++|++||+++.++++.+.++++..+-.. .+.++.++..| +..++.++|++|||++
T Consensus 43 ~~yWW~a~~~-~~l~d~~~~tgd~~y~~~a~~~~~~~~~~~~~~~~~~~~DD~a~---------~~la~~~aye~t~~~~ 112 (349)
T 3k7x_A 43 FNYWWLAHLV-EVRLDAYLRTKKQADLEVAEKTYLHNKNRNGGTLIHDFYDDMLW---------NALAAYRLYKATGKSI 112 (349)
T ss_dssp CCHHHHHHHH-HHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTSSSCCSBHHHHHH---------HHHHHHHHHHHHCCHH
T ss_pred CCccHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCCCCCccCccHHHH---------HHHHHHHHHHHHCCch
Confidence 3345678885 88999999999999999999999988765321 11222222222 3469999999999999
Q ss_pred HHHHHHhcccc---ccccc-cccc----cCCCCCCcccCcchHhHHHHHHHHHhCChHHHHHHHHHHHHhcccCeEee-c
Q 043003 308 HLKLAELFDKP---CFLGL-LAVK----ADNIAGLHANTHIPLVCGVQNRYELTGDEQSMAMGTFFMDIINSSHSYAT-G 378 (855)
Q Consensus 308 yL~LA~~F~~~---~~~~~-la~~----~d~l~g~HanthiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~~~Y~T-G 378 (855)
||++|+...+. .++++ ...+ .+......+-+..+.+..++++|++|||+.|++.|+..|+.+.+ +++-. |
T Consensus 113 yL~~A~~l~~~l~~~~wd~~~gGGi~W~~~~~~~knaisN~~~~~~la~l~~~tgd~~Yl~~A~~~~~w~~~-~l~d~~g 191 (349)
T 3k7x_A 113 YLEDAQLVWQDLVDTGWNDIMGGGFAWRRPQMYYKNTPVNAPFIILSCWLYNELNETKYLEWAMKTYEWQTK-VLVREDG 191 (349)
T ss_dssp HHHHHHHHHHHHHHHTBCSGGGSCBEEETTEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-HHBCTTS
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCceEecCCCccccchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh-cCCCCCC
Confidence 99999865321 11222 1111 10000011112344557788999999999999999999998865 33311 1
Q ss_pred CCCCCCCCCCCccccccCCcCccccchhh---HHHHHHHHHHccCCcchHHHHHHHHH
Q 043003 379 GTSHQEFWTDPKRIATALSAETEESCTTY---NMLKVSRYLFKWTKQVTYADYYERAL 433 (855)
Q Consensus 379 G~g~~E~f~~~~~l~~~l~~~~~ETCat~---nmlkl~~~Lf~~tgd~~YaD~~ERaL 433 (855)
.+-.+. .... + .....+..=+| -+|.-+-.|++.|+|.+|.+..++.+
T Consensus 192 ~v~Dg~--~~~~---~--g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a~~l~ 242 (349)
T 3k7x_A 192 FVEDGI--NRLE---D--GTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTANKTA 242 (349)
T ss_dssp CBCCEE--CTTS---S--SCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred eEecCC--ccCC---C--CccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Confidence 111110 0000 0 00001122223 25666788999999999999998865
No 12
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=98.65 E-value=1.4e-07 Score=105.42 Aligned_cols=231 Identities=13% Similarity=0.052 Sum_probs=137.3
Q ss_pred hHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhCCCcccccCCchhhhhhhccccccccchhhHHHHHHHHHHHHHh
Q 043003 170 GHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYTLA 249 (855)
Q Consensus 170 Gh~LsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~~~~~~r~~~l~~~w~pyy~~HkI~aGLld~Y~~T 249 (855)
|.|+.++..+|..|+|+++++.++.+++.+.. + +|-+. + +..++.+ .+|+..|+.|
T Consensus 71 G~~~~gl~~~ye~Tgd~~y~~~a~~~~~~~~~--~---~~~~~-----------n----~D~~~~~----~~l~~lY~~T 126 (382)
T 3pmm_A 71 GVGLYGIYQYYQQTGDIEMRDIIDRWFADRFA--E---GATTK-----------N----VNTMAPF----LTLAYRFEET 126 (382)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH--H---CCCCC-----------C----TTTTTTH----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHc--C---CCCcC-----------c----ccchHHH----HHHHHHHHHh
Confidence 99999999999999999999999999987653 2 22111 1 1112222 2467999999
Q ss_pred CChhHHHHHHHHHHHHHHHhhhhhhc-cc--------hhhhcccccccccchH-HHHHHHHHhcCCHHHHHHHHh-cc--
Q 043003 250 NNGQALNITIWMADYFNTRVQNLIAR-SS--------LERHYQTLNDESGGMN-DVLYKLYGITKDPKHLKLAEL-FD-- 316 (855)
Q Consensus 250 G~~kaL~ia~r~AD~~~~r~~~~~~~-~~--------~~~~~~~l~~E~GGmn-eaL~~LY~~TGd~ryL~LA~~-F~-- 316 (855)
|+++.+++|.+++|++.+++.+...+ .. ..+.| +..- -|+ ..|+++|++|||++|++.|.+ |.
T Consensus 127 gd~~Yl~~a~~~ad~L~~~~~r~~~Ggf~~~~~~~~~~~~~W--iDgl--~M~~p~La~~~~~tgd~~y~d~A~~q~~~~ 202 (382)
T 3pmm_A 127 GRMAYLPWLESWAEWAMHEMPRTEQGGMQHMTLAEENHQQMW--DDTL--MMTVLPLAKIGKLLNRPQYVEEATYQFLLH 202 (382)
T ss_dssp CCGGGHHHHHHHHHHHHHTSCBCGGGCBCCCCSSCCCTTEEE--TTHH--HHTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhCCCCcCCCeeeecCCCCCCCcEE--ecch--hhhHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 99999999999999998765321111 00 01112 1110 144 467999999999999998854 32
Q ss_pred cccccccccc----ccCCC------CCCcccCcchHhHHHHHHHHH-------hCChHHHHHHHHHHHHhcccCeEeecC
Q 043003 317 KPCFLGLLAV----KADNI------AGLHANTHIPLVCGVQNRYEL-------TGDEQSMAMGTFFMDIINSSHSYATGG 379 (855)
Q Consensus 317 ~~~~~~~la~----~~d~l------~g~HanthiP~~~G~a~~Y~~-------TGD~~y~~aa~~fwd~V~~~~~Y~TGG 379 (855)
...++|+... +.+.. ....+-.+-..+.|+++.|+. ++++.|++..+..-+.+.++.- .+|
T Consensus 203 ~~~l~D~~tGl~~h~~~~~~~~~~~~~~WaRG~gW~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a~~~~~~q~-~~G- 280 (382)
T 3pmm_A 203 VQNLMDRETGLWFHGWNYEGRHNFARARWARGNSWLTMVIPDFLELVDLPEGNAVRRYLITVLDAQIAALAECQD-DSG- 280 (382)
T ss_dssp HHHHBCTTTSCBCSEEETTTTBCTTCCCBHHHHHHHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHCC-TTS-
T ss_pred HHHccCCCCCCeeeeccCCCCCCCCcceecccccHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHcCC-CCC-
Confidence 1223332100 00000 001111223335789999987 5566777776666666655442 222
Q ss_pred CCCCCCCCCCccccccCCcCcccc----chhhHHHHHHHHHHccCCcchHHHHHHHHHhhhhcccCCC
Q 043003 380 TSHQEFWTDPKRIATALSAETEES----CTTYNMLKVSRYLFKWTKQVTYADYYERALTNGVLGIQRG 443 (855)
Q Consensus 380 ~g~~E~f~~~~~l~~~l~~~~~ET----Cat~nmlkl~~~Lf~~tgd~~YaD~~ERaLyN~iLa~q~~ 443 (855)
.|..--+-+ ..+.|| +.+|+|++..+.=+ - +.+|.+..|| .+++++..+++
T Consensus 281 -----~W~~~~d~~----~~y~EsSatA~~ay~ll~~~~~g~--l-~~~Y~~~a~k-a~~~l~~~i~~ 335 (382)
T 3pmm_A 281 -----LWHTLLDDP----HSYLEASATAGFAYGILKAVRKRY--V-GQHYAGVAEK-AIRGIVQNISP 335 (382)
T ss_dssp -----CEESBTTCT----TSCEEHHHHHHHHHHHHHHHHTTS--S-CGGGHHHHHH-HHHHHHHTBCT
T ss_pred -----ChhhccCCC----CCCccccHHHHHHHHHHHHHHcCC--C-cHHHHHHHHH-HHHHHHhhCCC
Confidence 232100111 234444 44678888776311 1 4689999999 46777776654
No 13
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=98.48 E-value=2.6e-06 Score=95.53 Aligned_cols=268 Identities=11% Similarity=0.046 Sum_probs=156.4
Q ss_pred hhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhCC-CcccccCCchhhhhhhccccccccchhhHHHHHHHHHHHH
Q 043003 169 LGHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKIG-TGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYT 247 (855)
Q Consensus 169 ~Gh~LsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~-DGYL~a~~~~~~~r~~~l~~~w~pyy~~HkI~aGLld~Y~ 247 (855)
-|..|.++|.+|..++++++++.++..++.|.+.-.... .||...+.+. +.... =...|..-.++.|+.+ |.
T Consensus 54 n~r~i~~~a~a~~~~g~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~dG-----~~~~~-~~~lyd~Af~i~al~~-~~ 126 (402)
T 3gt5_A 54 STRFVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCDD-----RVEDD-TNHCYGLAFVMLAYSC-GL 126 (402)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTBCTTTSCBCSEEETT-----EEEEC-CEEHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHhCccCCCCcEEEEeeCC-----CCCcC-CcchHHHHHHHHHHHH-HH
Confidence 588999999999999999999999999999987422102 4555544110 00000 0122333334456777 77
Q ss_pred HhCChhHHHHHHHHHHHHHHHhhhhhhc-cc--hhhhcccccccccc------hHHHHHHHHHhcCCHHHHHHHHhccc-
Q 043003 248 LANNGQALNITIWMADYFNTRVQNLIAR-SS--LERHYQTLNDESGG------MNDVLYKLYGITKDPKHLKLAELFDK- 317 (855)
Q Consensus 248 ~TG~~kaL~ia~r~AD~~~~r~~~~~~~-~~--~~~~~~~l~~E~GG------mneaL~~LY~~TGd~ryL~LA~~F~~- 317 (855)
.||++++|+.|.++.+.+.+++.....+ +. ....|. +.. .-+ +.+++.+||++|||++|++.|+...+
T Consensus 127 ~tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~-~~~-~~~~n~~m~l~eall~L~~~tgd~~~~~~a~~l~~~ 204 (402)
T 3gt5_A 127 KVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQWN-FTR-YRGQNANMHMCEAMLAAYEASGEQRYLERALVLADR 204 (402)
T ss_dssp HTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTCC-BCS-CEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HhCChhHHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCC-CCC-CCCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 7999999999999999999987431111 10 011121 111 111 34689999999999999999986542
Q ss_pred --cccccccc----cccC-CCC-CCcccCcch--------HhHHH--------HHHHHHhCChHHHHHHHHHHHHhcccC
Q 043003 318 --PCFLGLLA----VKAD-NIA-GLHANTHIP--------LVCGV--------QNRYELTGDEQSMAMGTFFMDIINSSH 373 (855)
Q Consensus 318 --~~~~~~la----~~~d-~l~-g~HanthiP--------~~~G~--------a~~Y~~TGD~~y~~aa~~fwd~V~~~~ 373 (855)
..|.++.. ..-+ +.. ....|..-| +-.|+ .+.+++++|+.|++.+...++.+.+ +
T Consensus 205 ~~~~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~~~~~~~A~~l~~~~~~-~ 283 (402)
T 3gt5_A 205 ITRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLFDVAVA-R 283 (402)
T ss_dssp HHTHHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCCTTHHHHHHHHHHHHHH-H
T ss_pred HHHHhhCccCCeeEEEECCCCCCccccccCCcccccCcCCCCCChHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH-h
Confidence 12222100 0000 000 000000001 11243 4557889999999999888887653 2
Q ss_pred eEe--ecCCCCCCCCCCCccccccCCcCccccchhhHHHHHHHHHHccCCcchHHHHHHHHH---hhhhcccCCCCCCCe
Q 043003 374 SYA--TGGTSHQEFWTDPKRIATALSAETEESCTTYNMLKVSRYLFKWTKQVTYADYYERAL---TNGVLGIQRGTEPGV 448 (855)
Q Consensus 374 ~Y~--TGG~g~~E~f~~~~~l~~~l~~~~~ETCat~nmlkl~~~Lf~~tgd~~YaD~~ERaL---yN~iLa~q~~~d~g~ 448 (855)
.+- .||+-. +.+.+.-+ .......+...+.|.-.-.|++.|||.+|.+.++++. ..+++-.. .+.-
T Consensus 284 gwd~~~Gg~~~---~~d~~g~~---~~~~k~~W~qaEal~a~l~ly~~tgd~~yl~~a~~~~~~~~~~~~D~~---~G~W 354 (402)
T 3gt5_A 284 SWDAVRGGLCY---GFAPDGTI---CDDDKYFWVQAESLAAAALLATRSGDERYWQWYDRLWAYAWQHMVDHR---YGAW 354 (402)
T ss_dssp HBCTTTCSBCS---EECTTSCE---EECCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCTT---TCSB
T ss_pred cccCCCCcEEE---EEcCCCCe---eeCCcceeHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcCCC---CCeE
Confidence 221 344421 01111111 1245566777778888888999999999999998875 34444332 3344
Q ss_pred EEEecCC
Q 043003 449 MIYMLPL 455 (855)
Q Consensus 449 ~~Y~~PL 455 (855)
|.+.++-
T Consensus 355 ~~~l~~d 361 (402)
T 3gt5_A 355 YRLLDGD 361 (402)
T ss_dssp CSEECTT
T ss_pred EEEECCC
Confidence 5555543
No 14
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=98.35 E-value=2.3e-06 Score=94.77 Aligned_cols=193 Identities=10% Similarity=-0.056 Sum_probs=114.6
Q ss_pred hhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhCCCcccccCCchhhhhhhccccccccchhhHHHHHHHHHHHHH
Q 043003 169 LGHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYTL 248 (855)
Q Consensus 169 ~Gh~LsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~~~~~~r~~~l~~~w~pyy~~HkI~aGLld~Y~~ 248 (855)
-+.++.|++.+|..|+|++.++.+.++.+.|.+.... ++||+...... ++..+. +=-..|.+.+ |++.|++
T Consensus 117 ~af~i~al~~~y~~tg~~~~l~~A~~~~~~i~~~~~d-~~g~~~~~~~~----~~~~~~---~~~~~~~~~a-ll~l~~~ 187 (388)
T 2gz6_A 117 DCFAAMAFSQYALASGEEWAKDVAMQAYNNVLRRKDN-PKGKYTKTYPG----TRPMKA---LAVPMILANL-TLEMEWL 187 (388)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTC-------------------CCCCEE---THHHHHHHHH-HHHTGGG
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcC-CCcccCcccCC----CCCCCC---CCHHHHHHHH-HHHHHHH
Confidence 3679999999999999999999999999999876631 45765442211 111121 2223465554 7799999
Q ss_pred hCChhHHHHHHHHHHHHHHHhhhhhhc-c--chhhhccccc------ccccchH---HHHHHHHHhcCCHHHHHHHHhcc
Q 043003 249 ANNGQALNITIWMADYFNTRVQNLIAR-S--SLERHYQTLN------DESGGMN---DVLYKLYGITKDPKHLKLAELFD 316 (855)
Q Consensus 249 TG~~kaL~ia~r~AD~~~~r~~~~~~~-~--~~~~~~~~l~------~E~GGmn---eaL~~LY~~TGd~ryL~LA~~F~ 316 (855)
||+++.++.|.++++.+.+++...-.+ + .....|..+. .+.|+.. ..|.+++++|||++|++.|+...
T Consensus 188 t~d~~~~~~A~~~~~~~~~~~~~~~~g~~~e~~~~~w~~~~~~~~~~~~pgh~~e~a~lL~~~~~~tgd~~~~~~A~~~~ 267 (388)
T 2gz6_A 188 LPQETLENVLAATVQEVMGDFLDQEQGLMYENVAPDGSHIDCFEGRLINPGHGIEAMWFIMDIARRKNDSKTINQAVDVV 267 (388)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTEETTTTEECSEECTTSCCCCSTTTTEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999999999999999999876421111 0 0011122111 1222222 36899999999999999997653
Q ss_pred ccc---cccc--------cccccCCCCCC-ccc----CcchHhHHHHHHHHHhCChHHHHHHHHHHHHhc
Q 043003 317 KPC---FLGL--------LAVKADNIAGL-HAN----THIPLVCGVQNRYELTGDEQSMAMGTFFMDIIN 370 (855)
Q Consensus 317 ~~~---~~~~--------la~~~d~l~g~-Han----thiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~ 370 (855)
+.. .+++ +.....+..+. +.+ .|...++|++.+|++|||++|++.++..|+.+.
T Consensus 268 ~~~~~~g~d~~~Gg~~~~~~~~g~~~~~~~~~~~~~W~qae~i~a~~~ly~~tgd~~yl~~a~~~~~~~~ 337 (388)
T 2gz6_A 268 LNILNFAWDNEYGGLYYFMDAAGHPPQQLEWDQKLWWVHLESLVALAMGYRLTGRDACWAWYQKMHDYSW 337 (388)
T ss_dssp HHHHHHHBCTTTCSBCSCEETTSCCCSCTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 311 1111 00000000000 011 133446889999999999999998888777654
No 15
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=98.34 E-value=1.6e-06 Score=96.39 Aligned_cols=234 Identities=14% Similarity=0.106 Sum_probs=141.9
Q ss_pred hHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhCCCcccccCCchhhhhhhccccccccchhhHHHHHHHHHHHHHh
Q 043003 170 GHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYTLA 249 (855)
Q Consensus 170 Gh~LsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~~~~~~r~~~l~~~w~pyy~~HkI~aGLld~Y~~T 249 (855)
|-|+.|++.+|..|+|+++++.+...++.+. + .+|.|. +.... +.+ + ..+ .++++.|+.|
T Consensus 44 G~~~~gl~~~y~~tgd~~y~~~a~~~~~~~~---~--~~g~l~-~~~~~------lDd-~---~~g----~~ll~lY~~T 103 (373)
T 1nc5_A 44 GVFLCGVLRLWEATGEKRYFEYAKAYADLLI---D--DNGNLL-FRRDE------LDA-I---QAG----LILFPLYEQT 103 (373)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHB---C--TTCCBC-CCTTC------GGG-T---GGG----GGHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh---C--CCCccc-CCCCC------cch-H---HHH----HHHHHHHHHh
Confidence 9999999999999999999999999998874 3 467665 43211 111 1 122 3577999999
Q ss_pred CChhHHHHHHHHHHHHHHHhhhhhhccchhhhccc-cccc---ccc--h-HHHHHHHHHhcCCHHHHHHHHhccc---cc
Q 043003 250 NNGQALNITIWMADYFNTRVQNLIARSSLERHYQT-LNDE---SGG--M-NDVLYKLYGITKDPKHLKLAELFDK---PC 319 (855)
Q Consensus 250 G~~kaL~ia~r~AD~~~~r~~~~~~~~~~~~~~~~-l~~E---~GG--m-neaL~~LY~~TGd~ryL~LA~~F~~---~~ 319 (855)
|+++.+++|..+++++..++... . ...|.. ..++ .=| | ...|+++|++|||++|++.|.+..+ ..
T Consensus 104 gd~~yl~~a~~la~~l~~~~r~~-~----G~fw~~~~~~~~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~~~~~~~~~ 178 (373)
T 1nc5_A 104 KDERYVKAAKRLRSLYGTLNRTS-E----GGFWHKDGYPYQMWLDGLYMGGPFALKYANLKQETELFDQVVLQESLMRKH 178 (373)
T ss_dssp CCHHHHHHHHHHHGGGGTSCBCT-T----SCBCSCTTSTTEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhccCCC-C----CCeeccCCCCCeEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999997654210 0 111210 0000 001 3 3577999999999999999976321 22
Q ss_pred cccccc----cccCC---------CCC----CcccCcchHhHHHHHHHHH-----hCChHHHHHHHHHHHHhcccCeEee
Q 043003 320 FLGLLA----VKADN---------IAG----LHANTHIPLVCGVQNRYEL-----TGDEQSMAMGTFFMDIINSSHSYAT 377 (855)
Q Consensus 320 ~~~~la----~~~d~---------l~g----~HanthiP~~~G~a~~Y~~-----TGD~~y~~aa~~fwd~V~~~~~Y~T 377 (855)
++|+.. .+.+. ..| ..+-.+-..+.|+++.|+. ++++.|++.++..-+.+.++..=.+
T Consensus 179 l~D~~tGl~~h~~~~~~~~~w~d~~tg~~~~~WaRg~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~a~~l~~~q~~~d 258 (373)
T 1nc5_A 179 TKDAKTGLFYHAWDEAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQDKET 258 (373)
T ss_dssp HBCTTTSCBCSEEETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTTSCTTT
T ss_pred hcCCCCCCEEeecCCccccccccccCCCCCCcccchHhHHHHHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHhcCCCC
Confidence 222210 00000 000 0011112245788889988 6888899998888888876542012
Q ss_pred cCCCCCCCCCCCccccccCCcCccc----cchhhHHHHHHHHHHccCCcchHHHHHHHHHhhhhcc
Q 043003 378 GGTSHQEFWTDPKRIATALSAETEE----SCTTYNMLKVSRYLFKWTKQVTYADYYERALTNGVLG 439 (855)
Q Consensus 378 GG~g~~E~f~~~~~l~~~l~~~~~E----TCat~nmlkl~~~Lf~~tgd~~YaD~~ERaLyN~iLa 439 (855)
| .|..--+-++ .+..+-| .+.+|.|++..+.-+. |.+|.+..||++ +++..
T Consensus 259 G------~W~~~ld~~~-~~~~~~EsSatA~~ay~l~~g~~~g~l---~~~Y~~~a~k~~-~~l~~ 313 (373)
T 1nc5_A 259 G------LWYQIVDKGD-RSDNWLESSGSCLYMYAIAKGINKGYL---DRAYETTLLKAY-QGLIQ 313 (373)
T ss_dssp S------CCBSBTTCTT-STTCCBCHHHHHHHHHHHHHHHHHTSS---CGGGHHHHHHHH-HHHHH
T ss_pred C------ceeeecCCCC-CCCCCccccHHHHHHHHHHHHHHCCCC---cHHHHHHHHHHH-HHHHH
Confidence 2 2321000010 1133455 4556888887755322 468999999987 66655
No 16
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=98.27 E-value=8.1e-06 Score=91.56 Aligned_cols=194 Identities=10% Similarity=-0.012 Sum_probs=119.0
Q ss_pred hHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHH-hhCCCcccccCCchhhhhhhccccccccchhhHHHHHHHHHHHHH
Q 043003 170 GHYLSATAMAWASTRNETVKQKMDAVMSVLSECQ-KKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYTL 248 (855)
Q Consensus 170 Gh~LsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q-~~~~DGYL~a~~~~~~~r~~~l~~~w~pyy~~HkI~aGLld~Y~~ 248 (855)
...+-|++. |..|+|++.++++.++.+.|.+.- +..+.||..++... |+ +...=.+.-.+|++++ ++..|++
T Consensus 116 Af~i~al~~-~~~tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~----~~-~~~~~~~n~~m~l~ea-ll~L~~~ 188 (402)
T 3gt5_A 116 AFVMLAYSC-GLKVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQ----WN-FTRYRGQNANMHMCEA-MLAAYEA 188 (402)
T ss_dssp HHHHHHHHH-HHHTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTT----CC-BCSCEEHHHHHHHHHH-HHHHHHH
T ss_pred HHHHHHHHH-HHHhCChhHHHHHHHHHHHHHHHhcCCcCCCchhhhCCC----CC-CCCCCCCCHHHHHHHH-HHHHHHh
Confidence 567778887 667999999999999999998763 31134555443321 21 1111012224677776 6699999
Q ss_pred hCChhHHHHHHHHHHHHHHHhhhhhhcc---chhhhcccc---------------cccccchHH---HHHHHHHhcCCHH
Q 043003 249 ANNGQALNITIWMADYFNTRVQNLIARS---SLERHYQTL---------------NDESGGMND---VLYKLYGITKDPK 307 (855)
Q Consensus 249 TG~~kaL~ia~r~AD~~~~r~~~~~~~~---~~~~~~~~l---------------~~E~GGmne---aL~~LY~~TGd~r 307 (855)
||+++.++.|.++++.+.+++...-.+. ....-|... ..+.|-+.| .|.+++++||+++
T Consensus 189 tgd~~~~~~a~~l~~~~~~~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~~~ 268 (402)
T 3gt5_A 189 SGEQRYLERALVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEW 268 (402)
T ss_dssp HCCHHHHHHHHHHHHHHHTHHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCCTT
T ss_pred hCCHHHHHHHHHHHHHHHHHhhCccCCeeEEEECCCCCCccccccCCcccccCcCCCCCChHHHHHHHHHHHHHhhCcHH
Confidence 9999999999999999988764311000 000112111 012343334 4788999999999
Q ss_pred HHHHHHhcccc---ccccccccc----cCCC-----CCCcccCcchHhHHHHHHHHHhCChHHHHHHHHHHHHhc
Q 043003 308 HLKLAELFDKP---CFLGLLAVK----ADNI-----AGLHANTHIPLVCGVQNRYELTGDEQSMAMGTFFMDIIN 370 (855)
Q Consensus 308 yL~LA~~F~~~---~~~~~la~~----~d~l-----~g~HanthiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~ 370 (855)
|++.|+.+.+. ..+++...+ .|.- .....-.|...+++++.+|++|||+.|++.++..|+.+.
T Consensus 269 ~~~~A~~l~~~~~~~gwd~~~Gg~~~~~d~~g~~~~~~k~~W~qaEal~a~l~ly~~tgd~~yl~~a~~~~~~~~ 343 (402)
T 3gt5_A 269 LVPVARSLFDVAVARSWDAVRGGLCYGFAPDGTICDDDKYFWVQAESLAAAALLATRSGDERYWQWYDRLWAYAW 343 (402)
T ss_dssp HHHHHHHHHHHHHHHHBCTTTCSBCSEECTTSCEEECCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCCCcEEEEEcCCCCeeeCCcceeHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99999876431 122211000 0000 001111223345788999999999999999998888764
No 17
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=98.26 E-value=2.3e-05 Score=88.41 Aligned_cols=272 Identities=9% Similarity=0.025 Sum_probs=154.4
Q ss_pred hhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhh-CCCcccccCCchhhhhhhccccccccchhhHHHHHHHHHHHH
Q 043003 169 LGHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKK-IGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYT 247 (855)
Q Consensus 169 ~Gh~LsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~-~~DGYL~a~~~~~~~r~~~l~~~w~pyy~~HkI~aGLld~Y~ 247 (855)
-|.-+.++|.++. +++++..+.++..++.|.+.-.. .+.||...... .|..... ...|..=.++.|+.+ |+
T Consensus 53 nar~i~~~a~a~~-~g~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d~----dg~~~~~--k~lyd~Af~i~al~~-~~ 124 (421)
T 2zbl_A 53 TARMLHVYSVAAS-MGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVND----QGVVDAS--KQGYQHFFALLGAAS-AV 124 (421)
T ss_dssp HHHHHHHHHHHHH-TTCTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEET----TEEEECC--EEHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHH-cCChhHHHHHHHHHHHHHHhccCcCCCeEEEEeCC----CCCcCCc--hhHHHHHHHHHHHHH-HH
Confidence 5778888999987 99999999999999999876321 12466643311 1111110 123333345556777 99
Q ss_pred HhCChhHHHHHHHHHHHHHHHhhhhhhc-cc--hhhhcccccc--cccc---hHHHHHHHHHhcCCHHHHHHHHhccc--
Q 043003 248 LANNGQALNITIWMADYFNTRVQNLIAR-SS--LERHYQTLND--ESGG---MNDVLYKLYGITKDPKHLKLAELFDK-- 317 (855)
Q Consensus 248 ~TG~~kaL~ia~r~AD~~~~r~~~~~~~-~~--~~~~~~~l~~--E~GG---mneaL~~LY~~TGd~ryL~LA~~F~~-- 317 (855)
+||++++++.|.+..+++.+.+.....+ +- ....+..... ...+ +.++|.+||++|||++|++.|+...+
T Consensus 125 ~tg~~~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~~~~~~~~~n~~m~~~~al~~l~~~tgd~~~~~~A~~~~~~~ 204 (421)
T 2zbl_A 125 TTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVI 204 (421)
T ss_dssp TTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTSCSBCSCEEHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHH
T ss_pred HhCCccHHHHHHHHHHHHHHHhccCCCCCeeeeecCCCCcccccCCCcHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 9999999999999999999887431111 10 0011111100 0001 36799999999999999988876432
Q ss_pred -cccccc----cc----cccCCCCCCc----ccCc-----chH-----hHHHHHHHHHh---CC--h-HHHHHHHHHHHH
Q 043003 318 -PCFLGL----LA----VKADNIAGLH----ANTH-----IPL-----VCGVQNRYELT---GD--E-QSMAMGTFFMDI 368 (855)
Q Consensus 318 -~~~~~~----la----~~~d~l~g~H----anth-----iP~-----~~G~a~~Y~~T---GD--~-~y~~aa~~fwd~ 368 (855)
..+.++ +. .+...+.+.. .+.. -|- .-++.+.|+++ || + .|++.|...++.
T Consensus 205 ~~~~~~~~~~~l~~~f~~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~~ 284 (421)
T 2zbl_A 205 IHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHA 284 (421)
T ss_dssp CCCCCGGGTTCCCCEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHH
T ss_pred HHHhccCCCCchhhhcCCccccchhccCCCcccccccCCCCCChHHHHHHHHHHHHHHcccccccchHHHHHHHHHHHHH
Confidence 111110 00 0000010100 0001 122 12456778998 66 5 899999988888
Q ss_pred hcccCeEe-e--cCCCCCCCCCCCccccccCCcCccccchhhHHHHHHHHHHccCCcchHHHHHHHHHhhhhccc-CCCC
Q 043003 369 INSSHSYA-T--GGTSHQEFWTDPKRIATALSAETEESCTTYNMLKVSRYLFKWTKQVTYADYYERALTNGVLGI-QRGT 444 (855)
Q Consensus 369 V~~~~~Y~-T--GG~g~~E~f~~~~~l~~~l~~~~~ETCat~nmlkl~~~Lf~~tgd~~YaD~~ERaLyN~iLa~-q~~~ 444 (855)
+.+ +.+- . ||.=-. ..+.. .+.....+.+....++.-.-.|++.|||.+|.+.+++++ +.+... .++.
T Consensus 285 ~~~-~g~d~~~~GG~~~~---~~~~g---~~~~~~k~~w~~aea~~all~l~~~tgd~~yl~~a~~~~-~~~~~~~~d~~ 356 (421)
T 2zbl_A 285 TIR-DAWAPDGADGFVYS---VDWDG---KPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWW-DYCIKYLMDYE 356 (421)
T ss_dssp HHH-HHBSCSSSSSBCSC---BCTTS---CBSCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHHHHHTBCTT
T ss_pred HHH-HhcCCCCCCcEEEe---ecCCC---CccCCCcccHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHHHHhCCCCC
Confidence 764 3432 2 342211 11111 111234455666667777778889999999999999864 333332 2221
Q ss_pred CCCeEEEecCCC
Q 043003 445 EPGVMIYMLPLS 456 (855)
Q Consensus 445 d~g~~~Y~~PL~ 456 (855)
.++-|.+..+.+
T Consensus 357 ~G~w~~~l~~~g 368 (421)
T 2zbl_A 357 NGSWWQELDADN 368 (421)
T ss_dssp TSSBCSEECTTS
T ss_pred CCeeEeeECcCc
Confidence 334455555443
No 18
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.16 E-value=1.2e-05 Score=91.33 Aligned_cols=305 Identities=12% Similarity=0.052 Sum_probs=170.4
Q ss_pred ccccCCCeEecCCCccHHHHHHHHhhhhccccchhhHhHHHhcCCCCCCCCCCCcccCC----cccc-cch-hhHHHHHH
Q 043003 103 KEVSLHDVRLLPNSMHWRAQQTNLEYLVMLDVDRLVWSFRKTAGLPTPGAPYGGWEDQK----MELR-GHF-LGHYLSAT 176 (855)
Q Consensus 103 ~p~~l~~VrL~~~~~~~~~~~~~~~yll~ld~drLL~nFR~~AGl~~~g~~~gGWe~~d----sdlr-GH~-~Gh~LsA~ 176 (855)
-++|...++-. --.+..++..+||....+.|++.. ..|... ..+..|.... .+.+ -|+ .|..++|+
T Consensus 20 ~~~~~~~~~~~---~i~~~~d~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~y~~Gv~l~gl 91 (445)
T 3k11_A 20 YQGTYGDLTPE---QVKKDIDRVFAYIDKETPARVVDK---NTGKVI--TDYTAMGDEAQLERGAFRLASYEWGVTYSAL 91 (445)
T ss_dssp CSSCCSCCCHH---HHHHHHHHHHHHHHHTSCCCEEET---TTCCEE--CCTTTCCTTEEECCCSSCTTSHHHHHHHHHH
T ss_pred CCCCCCcCCHH---HHHHHHHHHHHHHhccCcceeecC---CCCcee--ccccccccccccccCCcccCccCHHHHHHHH
Confidence 44677766542 345677888888888777665542 112100 0111222100 0000 011 49999999
Q ss_pred HHHHHhCCChHHHHHHHHHHHHHHHH------HhhCCCccccc-CCchhhhhhhccccccccchhhHHHHHHHHHHHHHh
Q 043003 177 AMAWASTRNETVKQKMDAVMSVLSEC------QKKIGTGYLSA-FPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYTLA 249 (855)
Q Consensus 177 A~~~a~t~D~~L~~k~d~~Vd~L~~~------Q~~~~DGYL~a-~~~~~~~r~~~l~~~w~pyy~~HkI~aGLld~Y~~T 249 (855)
+.+|..|+|+++.+.++..++.|.+. |.. .+|.+.. +... .. -..+.+ .+.++ .+|+..|+.|
T Consensus 92 ~~ay~~Tgd~kY~~ya~~~~dfi~~~~p~~~~~~~-~~G~l~~~~r~~-~~-~~~LDD------~g~~~-~~Li~lY~~T 161 (445)
T 3k11_A 92 IAAAETTGDKRYTDYVQNRFRFLAEVAPHFKRVYE-EKGKTDSQLLQI-LT-PHALDD------AGAVC-TAMIKLRLKD 161 (445)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHSCCCHHHHHH-HS-CCSGGG------THHHH-HHHHHHHHHC
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHhccchhhhhhh-ccCCeecccccc-cC-CCcchh------HHHHH-HHHHHHHHhc
Confidence 99999999999999999999887753 110 3555432 1000 00 000111 14444 4588999999
Q ss_pred CChhHHHHHHHHHHHHHHHhhhhhhc-cc-----hhhhcccccccccchH-HHHHHHHHhcCCHH--HHHHHHh-cc--c
Q 043003 250 NNGQALNITIWMADYFNTRVQNLIAR-SS-----LERHYQTLNDESGGMN-DVLYKLYGITKDPK--HLKLAEL-FD--K 317 (855)
Q Consensus 250 G~~kaL~ia~r~AD~~~~r~~~~~~~-~~-----~~~~~~~l~~E~GGmn-eaL~~LY~~TGd~r--yL~LA~~-F~--~ 317 (855)
++++++++|..++||+.+++.+...+ +. ..++|. .+- -|+ ..|++++++|||++ |++.|.. |. .
T Consensus 162 ~d~~yl~~a~~~ad~L~~~~pRt~~Ggf~h~~~~~~q~Wi--D~l--yM~~pfla~~~~~tgd~~~~y~d~A~~q~~~~~ 237 (445)
T 3k11_A 162 ESLPVDGLIQNYFDFIINKEYRLADGTFARNRPQRNTLWL--DDM--FMGIPAVAQMSRYDKEAKNKYLAEAVKQFLQFA 237 (445)
T ss_dssp TTCCCHHHHHHHHHHHHHTSCBCTTCCBCBCSSSTTEEET--HHH--HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCCCCCCceeecCCCCCceEe--cch--hhHHHHHHHHHHHHCCcchHHHHHHHHHHHHHH
Confidence 99999999999999999987432111 00 012221 111 145 36789999999999 9998865 32 1
Q ss_pred ccccccccc----ccCCC----C-CCcccCcchHhHHHHHHHHH-----hCChHHHHHHHHHHHHhcccCeEeecCCCCC
Q 043003 318 PCFLGLLAV----KADNI----A-GLHANTHIPLVCGVQNRYEL-----TGDEQSMAMGTFFMDIINSSHSYATGGTSHQ 383 (855)
Q Consensus 318 ~~~~~~la~----~~d~l----~-g~HanthiP~~~G~a~~Y~~-----TGD~~y~~aa~~fwd~V~~~~~Y~TGG~g~~ 383 (855)
..++|+... +-+.- . ..++-.+-..+.|+++.++. ++.+.+++..+..-+.+.+..- .+|
T Consensus 238 ~~l~D~~tGL~~Hg~~~~~~~~~~~~WaRGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q~-~~G----- 311 (445)
T 3k11_A 238 DRMFIPEKGLYRHGWVESSTDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQS-GEG----- 311 (445)
T ss_dssp HHHEETTTTEECSEEETTCSSCCCCCBHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTTCC-TTS-----
T ss_pred HhcccCCCCCEeeeecCCCCCCCcceecccchHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHhCC-CCC-----
Confidence 223332100 00000 0 01122233345788999986 5566777777777777765442 122
Q ss_pred CCCCCCccccccCCcCcccc----chhhHHHHHHHHHHccCCcchHHHHHHHHHhhhhcccCCC
Q 043003 384 EFWTDPKRIATALSAETEES----CTTYNMLKVSRYLFKWTKQVTYADYYERALTNGVLGIQRG 443 (855)
Q Consensus 384 E~f~~~~~l~~~l~~~~~ET----Cat~nmlkl~~~Lf~~tgd~~YaD~~ERaLyN~iLa~q~~ 443 (855)
.|.. +.+. +..+.|| +.+|+|++..+.-+ -....|.+..+|++ ++++...++
T Consensus 312 -~W~~---vld~-~~~y~EsSaTAmfaygllkgvr~G~--Ld~~~Y~~~A~ka~-~~L~~~i~~ 367 (445)
T 3k11_A 312 -FWHQ---LLDC-NDSYLETSATAIYVYCLAHAINKGW--IDAIAYGPVAQLGW-HAVAGKINE 367 (445)
T ss_dssp -CEES---BTTC-TTSCEEHHHHHHHHHHHHHHHHHTS--SCHHHHHHHHHHHH-HHHHTTBCT
T ss_pred -chhh---ccCC-CCCCCCccHHHHHHHHHHHHHHcCC--CCHHHHHHHHHHHH-HHHHHhCCC
Confidence 3321 1110 1344454 44577888776532 22346999988864 566665543
No 19
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=98.05 E-value=0.00012 Score=81.55 Aligned_cols=243 Identities=10% Similarity=0.018 Sum_probs=139.0
Q ss_pred chhhHHH-HHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhCCCcccccCCchhhhhhhccccccccchhhHHHHHHHHHH
Q 043003 167 HFLGHYL-SATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQ 245 (855)
Q Consensus 167 H~~Gh~L-sA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~~~~~~r~~~l~~~w~pyy~~HkI~aGLld~ 245 (855)
|=+|..+ -.++..|..|+|++.++.+....+.|...=. -..|+|-.+.......+ -..+|--- + +.+.+|..+
T Consensus 87 HD~Gf~~~~s~~~~y~ltg~~~~~~~~~~aA~~L~~r~~-~~~g~i~sw~~~~~~~~--~~~~iID~--m-mni~~L~~A 160 (377)
T 2ahf_A 87 HNIGFLYSLSAKAQWIVEKDESARKLALDAADVLMRRWR-ADAGIIQAWGPKGDPEN--GGRIIIDC--L-LNLPLLLWA 160 (377)
T ss_dssp STHHHHHHTTHHHHHHHHCCHHHHHHHHHHHHHHHTTEE-TTTTEECCBSSTTCTTT--TTEEEGGG--G-GGHHHHHHH
T ss_pred CCchHhhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC-CCCCeEEeccCCCCCCC--CceEEech--H-HHHHHHHHH
Confidence 3357633 4677788999999999999988888775322 13477766532000000 00111111 1 123568889
Q ss_pred HHHhCChhHHHHHHHHHHHHHHHhhh----hhhccc-----hhh-h--c-ccccccc------cchHHHHHHHHHhcCCH
Q 043003 246 YTLANNGQALNITIWMADYFNTRVQN----LIARSS-----LER-H--Y-QTLNDES------GGMNDVLYKLYGITKDP 306 (855)
Q Consensus 246 Y~~TG~~kaL~ia~r~AD~~~~r~~~----~~~~~~-----~~~-~--~-~~l~~E~------GGmneaL~~LY~~TGd~ 306 (855)
++.+|+++.+++|++.++.+.+.+-+ +.+... .+- + . +...+.+ +-+..++..+|+.|+|+
T Consensus 161 ~~~~gd~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~ 240 (377)
T 2ahf_A 161 GEQTGDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNA 240 (377)
T ss_dssp HHHHCCTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHCCh
Confidence 99999999999999999999987622 111000 000 0 0 0011111 12457999999999999
Q ss_pred HHHHHHHhccccccccccccccCCCCCCc-------ccCcchH-----hHHHHHHHHHhC-----ChHHHHHHHHHHHHh
Q 043003 307 KHLKLAELFDKPCFLGLLAVKADNIAGLH-------ANTHIPL-----VCGVQNRYELTG-----DEQSMAMGTFFMDII 369 (855)
Q Consensus 307 ryL~LA~~F~~~~~~~~la~~~d~l~g~H-------anthiP~-----~~G~a~~Y~~TG-----D~~y~~aa~~fwd~V 369 (855)
+||+.|+.+.+- ++..+. .|.....+ .+...|. +.|+.+++++++ +++|+++|+...+.+
T Consensus 241 ~yL~~A~~la~~-~l~~~~--~d~~pywd~~~~~~~~~~~d~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~l 317 (377)
T 2ahf_A 241 DLLETAKRMARH-FLARVP--EDGVVYWDFEVPQEPSSYRDSSASAITACGLLEIASQLDESDPERQRFIDAAKTTVTAL 317 (377)
T ss_dssp HHHHHHHHHHHH-HHTTCC--TTSSCBSBTTSCCCTTSCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHhhH--HhCCcccccCCCccCCCccCCCHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHH
Confidence 999999876431 001110 01000001 0111232 257788899996 688999999999988
Q ss_pred cccCeEeecCCCCCCCCCCCccccccCCcCccccchhhHHHHHHHHHHccCC
Q 043003 370 NSSHSYATGGTSHQEFWTDPKRIATALSAETEESCTTYNMLKVSRYLFKWTK 421 (855)
Q Consensus 370 ~~~~~Y~TGG~g~~E~f~~~~~l~~~l~~~~~ETCat~nmlkl~~~Lf~~tg 421 (855)
.+...-..|..+.+...+.-+..+. .....+|..|+--++.+-|.++.+
T Consensus 318 ~~~y~~~~~~~~~g~L~h~~~~~~~---~~~~d~~~~ygDy~~~Eal~r~~~ 366 (377)
T 2ahf_A 318 RDGYAERDDGEAEGFIRRGSYHVRG---GISPDDYTIWGDYYYLEALLRLER 366 (377)
T ss_dssp HHHTBCCCCSSCCCSBSCBCSBTTT---TBSSSBCBHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCeEEecccccCCC---CCCCCcCccHHHHHHHHHHHHHHc
Confidence 7532222233333433333333333 224667777777777777766654
No 20
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=97.97 E-value=6.3e-05 Score=83.84 Aligned_cols=275 Identities=7% Similarity=-0.075 Sum_probs=149.5
Q ss_pred hhHHHHHHHHHHHhC---CChHHHHHHHHHHHHHHHHH-hhCCC-cccccCCchhhhhhhccccccccchhhHHHHHHHH
Q 043003 169 LGHYLSATAMAWAST---RNETVKQKMDAVMSVLSECQ-KKIGT-GYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLL 243 (855)
Q Consensus 169 ~Gh~LsA~A~~~a~t---~D~~L~~k~d~~Vd~L~~~Q-~~~~D-GYL~a~~~~~~~r~~~l~~~w~pyy~~HkI~aGLl 243 (855)
-|.-|.++|.+|..+ ++++.++.++..++.|.+.- ...+. |+......+ ++.... -...|..=.+..|++
T Consensus 58 nar~l~~~a~a~~~~~~~~~~~~l~~A~~~~~fl~~~~~d~~gg~g~~~s~d~d----g~~~~~-~~~lyd~af~~~a~~ 132 (402)
T 1fp3_A 58 QGRQVWMYCRLYRKLERFHRPELLDAAKAGGEFLLRHARVAPPEKKCAFVLTRD----GRPVKV-QRSIFSECFYTMAMN 132 (402)
T ss_dssp HHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTBSSTTSCCBCSEECTT----SCEEEC-CSSSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhccCcCCCCceEEEECCC----CCcccc-ccchHHHHHHHHHHH
Confidence 355578888888876 99999999999999999873 31122 666543211 111000 011222223445688
Q ss_pred HHHHHhCChhHHHHHHHHHHHHHHHhh-hhhhccchh-hhcccccccccc-h--HHHHHH---HHHhcCCHHHHHHHHhc
Q 043003 244 DQYTLANNGQALNITIWMADYFNTRVQ-NLIARSSLE-RHYQTLNDESGG-M--NDVLYK---LYGITKDPKHLKLAELF 315 (855)
Q Consensus 244 d~Y~~TG~~kaL~ia~r~AD~~~~r~~-~~~~~~~~~-~~~~~l~~E~GG-m--neaL~~---LY~~TGd~ryL~LA~~F 315 (855)
++|++||+++.++.|.++.+++.+.+. ..-..+... ..+.... ...+ | .+++.. ||.+|+++ |++.|+..
T Consensus 133 ~~~~atgd~~~~~~A~~l~~~~~~~~~d~~~G~f~~~~~~~~~~~-~~~~~m~~~~~~l~l~~l~~~~~~~-~~~~a~~~ 210 (402)
T 1fp3_A 133 ELWRVTAEARYQSEAVDMMDQIVHWVREDPSGLGRPQLPGAVASE-SMAVPMMLLCLVEQLGEEDEELAGR-YAQLGHWC 210 (402)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHHHTCGGGGCCCCCTTSCCEE-ETHHHHHHHHHHHHHHTTCHHHHHH-THHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHhccCCCcccCccccCccCCC-CcchHHHHHHHHHHHHHHHHhcCcH-HHHHHHHH
Confidence 999999999999999999999998874 211111100 0011000 0011 1 235666 77888655 88777663
Q ss_pred cc---ccccccccc----ccC-CCC------CCccc-C-cchHhHHHHHHHHHhCChHHHHHHHHHHHHh-cccCeEe--
Q 043003 316 DK---PCFLGLLAV----KAD-NIA------GLHAN-T-HIPLVCGVQNRYELTGDEQSMAMGTFFMDII-NSSHSYA-- 376 (855)
Q Consensus 316 ~~---~~~~~~la~----~~d-~l~------g~Han-t-hiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V-~~~~~Y~-- 376 (855)
.+ .. +++-.. ..| ... +.+.+ . .|...-.+++.++++||+.|+++|+...+.+ .+ +++-
T Consensus 211 ~~~~~~~-~~~~~~~~~e~~d~dw~~~~~~~g~~~~pgh~ie~~wlL~~a~~~~~~~~~l~~A~~~~~~~~~~-~~~d~~ 288 (402)
T 1fp3_A 211 ARRILQH-VQRDGQAVLENVSEDGEELSGCLGRHQNPGHALEAGWFLLRHSSRSGDAKLRAHVIDTFLLLPFR-SGWDAD 288 (402)
T ss_dssp HHHHHTT-EETTTTEECSEEETTSCBCCHHHHHEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTHHHHH-HHBCTT
T ss_pred HHHHHHH-hCcCCCeEEEEECCCCCccCCCCCCCCCCCcHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH-HhccCC
Confidence 22 11 221000 000 000 00000 0 0111113556689999999999998888877 53 3332
Q ss_pred ecCCCCCCCCCCCccccccCCcCccccchhhHHHHHHHHHHccCCcchHHHHHHHHHhhhhccc-CCCCCCCeEEEecCC
Q 043003 377 TGGTSHQEFWTDPKRIATALSAETEESCTTYNMLKVSRYLFKWTKQVTYADYYERALTNGVLGI-QRGTEPGVMIYMLPL 455 (855)
Q Consensus 377 TGG~g~~E~f~~~~~l~~~l~~~~~ETCat~nmlkl~~~Lf~~tgd~~YaD~~ERaLyN~iLa~-q~~~d~g~~~Y~~PL 455 (855)
+||.-..-.+. ......+.......+....++.-.-.|++.|+|.+|.+.+++. .+-+... .++.+++-|.+..+-
T Consensus 289 ~gg~~~~~~~~--g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tgd~~yl~~a~~~-~~~~~~~f~D~~~G~w~~~~~~~ 365 (402)
T 1fp3_A 289 HGGLFYFQDAD--GLCPTQLEWAMKLWWPHSEAMIAFLMGYSESGDPALLRLFYQV-AEYTFRQFRDPEYGEWFGYLNRE 365 (402)
T ss_dssp TCSBCSCEETT--SCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH-HHHHHHHTBCTTTSSBCCEECTT
T ss_pred CCCEEEeecCC--CCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHhCcCCCCCceEeeECCC
Confidence 14432110110 1111122233444566677788888899999999999988874 4444443 233233444555443
No 21
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=97.91 E-value=7.7e-05 Score=83.38 Aligned_cols=165 Identities=10% Similarity=-0.017 Sum_probs=96.4
Q ss_pred CChHHHHHHHHHHHHHHHHHhhCCCcccc-cCCchhhhhhhccccccccchhhHHHHHHHHHHHHHhCChhHHHHHHHHH
Q 043003 184 RNETVKQKMDAVMSVLSECQKKIGTGYLS-AFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYTLANNGQALNITIWMA 262 (855)
Q Consensus 184 ~D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~-a~~~~~~~r~~~l~~~w~pyy~~HkI~aGLld~Y~~TG~~kaL~ia~r~A 262 (855)
..++++++++.+++.|...++ .+|.+. .+++..... ......| -|..+..+ .||..+|++||+++.++.|.+.+
T Consensus 23 ~~~~~~~~l~~~~~~l~~~~~--~~~~f~~~~~~~~~~d-~k~~~~W-~Wt~G~~~-~gl~~~ye~Tgd~~y~~~a~~~~ 97 (382)
T 3pmm_A 23 ARSELQALIRNVTQNLVNIKD--ESGQFLLRLDDGRVID-TKGWAGW-EWTHGVGL-YGIYQYYQQTGDIEMRDIIDRWF 97 (382)
T ss_dssp CHHHHHHHHHHHHHHHHHCCC--TTCTTCEECTTSCEEC-SSSTTSC-SHHHHHHH-HHHHHHHHHHCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhccC--ccccccccCCcccccc-CCCCcCc-cccHHHHH-HHHHHHHHHHCCHHHHHHHHHHH
Confidence 356899999999999988777 544432 232111000 0111223 24556554 56889999999999999999988
Q ss_pred HHHHHHhhhhhhccchhhhcccccccccchHHHHHHHHHhcCCHHHHHHHHhcccc---ccccccccccCCCCCCcc---
Q 043003 263 DYFNTRVQNLIARSSLERHYQTLNDESGGMNDVLYKLYGITKDPKHLKLAELFDKP---CFLGLLAVKADNIAGLHA--- 336 (855)
Q Consensus 263 D~~~~r~~~~~~~~~~~~~~~~l~~E~GGmneaL~~LY~~TGd~ryL~LA~~F~~~---~~~~~la~~~d~l~g~Ha--- 336 (855)
+.+.+. +.... +-..+.+-.+|.+||++|||++|++.|....+. .+......+ + .|.
T Consensus 98 ~~~~~~------~~~~~------n~D~~~~~~~l~~lY~~Tgd~~Yl~~a~~~ad~L~~~~~r~~~Gg---f--~~~~~~ 160 (382)
T 3pmm_A 98 ADRFAE------GATTK------NVNTMAPFLTLAYRFEETGRMAYLPWLESWAEWAMHEMPRTEQGG---M--QHMTLA 160 (382)
T ss_dssp HHHHHH------CCCCC------CTTTTTTHHHHHHHHHHHCCGGGHHHHHHHHHHHHHTSCBCGGGC---B--CCCCSS
T ss_pred HHHHcC------CCCcC------cccchHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCcCCC---e--eeecCC
Confidence 855432 11110 111122335889999999999999999765431 111110110 0 111
Q ss_pred ---cCcc------hHhHHHHHHHHHhCChHHHHHHHHHHHHhc
Q 043003 337 ---NTHI------PLVCGVQNRYELTGDEQSMAMGTFFMDIIN 370 (855)
Q Consensus 337 ---nthi------P~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~ 370 (855)
+.++ -...-+++.|++|||++|.+.+..-++...
T Consensus 161 ~~~~~~~WiDgl~M~~p~La~~~~~tgd~~y~d~A~~q~~~~~ 203 (382)
T 3pmm_A 161 EENHQQMWDDTLMMTVLPLAKIGKLLNRPQYVEEATYQFLLHV 203 (382)
T ss_dssp CCCTTEEETTHHHHTHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCcEEecchhhhHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 0011 011245778999999999987665444443
No 22
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=97.85 E-value=0.00019 Score=80.47 Aligned_cols=241 Identities=12% Similarity=0.035 Sum_probs=141.0
Q ss_pred hhHHHH-HHHHHHHhCCChHHHHHHHHHHHHHHHHHhhCCCcccccCCchhhhhhhccccccccchhhHHHHHHHHHHHH
Q 043003 169 LGHYLS-ATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYT 247 (855)
Q Consensus 169 ~Gh~Ls-A~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~~~~~~r~~~l~~~w~pyy~~HkI~aGLld~Y~ 247 (855)
+|..+. .++..|..|+|++.++.+....+.|...=. -..|++-+.... .+.+. ..+|- =+.+ -+.+|..+++
T Consensus 115 ~GF~~~~s~~~~y~ltg~~~~~~~~~~aA~~L~~r~~-~~~g~iqsw~~~-~~~~~--~~~iI-D~~m--ni~~L~~A~~ 187 (397)
T 2zzr_A 115 LGFLYTPSCTAEYRINGDVKALEATIKAADKLMERYQ-EKGGFIQAWGEL-GYKEH--YRLII-DCLL--NIQLLFFAYE 187 (397)
T ss_dssp HHHHHTTTHHHHHHHHCCHHHHHHHHHHHHHHHTTEE-TTTTEECCSSST-TCGGG--CEEET-THHH--HTHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhC-cCCCEEEecccC-CCCCC--Cceee-chHh--HHHHHHHHHH
Confidence 465443 367788899999999999999998864321 155777765421 00010 11221 1112 1245778899
Q ss_pred HhCChhHHHHHHHHHHHHHHHhhh----hhhccc-----hhh-h---cccccccc------cchHHHHHHHHHhcCCHHH
Q 043003 248 LANNGQALNITIWMADYFNTRVQN----LIARSS-----LER-H---YQTLNDES------GGMNDVLYKLYGITKDPKH 308 (855)
Q Consensus 248 ~TG~~kaL~ia~r~AD~~~~r~~~----~~~~~~-----~~~-~---~~~l~~E~------GGmneaL~~LY~~TGd~ry 308 (855)
.+|+++.+++|++.|+.+.+.+-+ +.+... ++- + .+...+++ .-+..++..||+.|||++|
T Consensus 188 ~~gd~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~y 267 (397)
T 2zzr_A 188 QTGDEKYRQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQ 267 (397)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHH
T ss_pred HhCCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHH
Confidence 999999999999999999987621 111000 000 0 00111111 1246799999999999999
Q ss_pred HHHHHhccccccccccccccCCCCCCccc-Ccc------hH-----hHHHHHHHHHhCC---hH--HHHHHHHHHHHhcc
Q 043003 309 LKLAELFDKPCFLGLLAVKADNIAGLHAN-THI------PL-----VCGVQNRYELTGD---EQ--SMAMGTFFMDIINS 371 (855)
Q Consensus 309 L~LA~~F~~~~~~~~la~~~d~l~g~Han-thi------P~-----~~G~a~~Y~~TGD---~~--y~~aa~~fwd~V~~ 371 (855)
|++|+.+.+- ++..+. .|.....+.. ..+ |. +.|+.+++++|++ ++ |+++|+...+.+..
T Consensus 268 L~~A~~la~~-~l~~~~--~d~~pywdt~~~~~~~~~~D~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~l~~ 344 (397)
T 2zzr_A 268 IILFKGMTNY-FLNRLP--EDKVSYWDLIFTDGSGQPRDTSATATAVCGIHEMLKYLPEVDPDKETYKYAMHTMLRSLIE 344 (397)
T ss_dssp HHHHHHHHHH-HHHTCC--TTSCCBSBTTCCTTSCCCBCHHHHHHHHHHHHHHHTTSCTTCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHhhH--HhCCccccCCCCCCCCCcCCCCHHHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHH
Confidence 9999876431 000010 0100000100 001 22 2577888999987 77 99999999998875
Q ss_pred cCeEeecCCCCCCCCCCCccccccCCcCccccchhhHHHHHHHHHHccCCc
Q 043003 372 SHSYATGGTSHQEFWTDPKRIATALSAETEESCTTYNMLKVSRYLFKWTKQ 422 (855)
Q Consensus 372 ~~~Y~TGG~g~~E~f~~~~~l~~~l~~~~~ETCat~nmlkl~~~Lf~~tgd 422 (855)
...-..|..+.+.-.+.-+..+. ......|..|+--++.+-|.++.++
T Consensus 345 ~y~~~~~~~~~glL~h~~~~~~~---~~~~d~~~~~gDYy~~Eal~r~~~~ 392 (397)
T 2zzr_A 345 QYSNNELIAGRPLLLHGVYSWHS---GKGVDEGNIWGDYYYLEALIRFYKD 392 (397)
T ss_dssp HTBCCCCCTTCCSBCCEEEETTT---TEEEEECBHHHHHHHHHHHHHHHSC
T ss_pred HHhccCCCCCCceeeeceeeCCC---CCCCCCCcchHHHHHHHHHHHHhcC
Confidence 42222233333333333344443 3466778888888888888777654
No 23
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=97.82 E-value=0.00012 Score=81.33 Aligned_cols=171 Identities=11% Similarity=0.025 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhhccchhhhcccccccccchHHHHHHHHHhcCCHHHHHHHHhccccccccccccccCCCC-
Q 043003 254 ALNITIWMADYFNTRVQNLIARSSLERHYQTLNDESGGMNDVLYKLYGITKDPKHLKLAELFDKPCFLGLLAVKADNIA- 332 (855)
Q Consensus 254 aL~ia~r~AD~~~~r~~~~~~~~~~~~~~~~l~~E~GGmneaL~~LY~~TGd~ryL~LA~~F~~~~~~~~la~~~d~l~- 332 (855)
....+.+++|++.++..+..... ...|.. +.|-|..+|.++|++|||++|++.|+...+..+ ++ .+ .+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~--~~~W~w---~~G~~~~gl~~~y~~tgd~~y~~~a~~~~~~~~-~~--~g--~l~~ 82 (373)
T 1nc5_A 13 PLTYAEALANTIMNTYTVEELPP--ANRWHY---HQGVFLCGVLRLWEATGEKRYFEYAKAYADLLI-DD--NG--NLLF 82 (373)
T ss_dssp HHHHHHHHHHHHHHHCCTTTSSS--TTCCCH---HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHB-CT--TC--CBCC
T ss_pred hHHHHHHHHHHHHHhCCCcccCC--CCCcch---hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh-CC--CC--cccC
Confidence 56788999999998764321100 111211 234567899999999999999999987654211 11 01 110
Q ss_pred -CCcccCcchHhHHHHHHHHHhCChHHHHHHHHHHHHhcccCeEeecCCCCCCCCCCCccccccCCcCccccchh-hHHH
Q 043003 333 -GLHANTHIPLVCGVQNRYELTGDEQSMAMGTFFMDIINSSHSYATGGTSHQEFWTDPKRIATALSAETEESCTT-YNML 410 (855)
Q Consensus 333 -g~HanthiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~~~Y~TGG~g~~E~f~~~~~l~~~l~~~~~ETCat-~nml 410 (855)
..+.+++ ....++..+|++|||++|++++...++.+.. +- -++. +-+|..+. .....-|-. +-.+
T Consensus 83 ~~~~lDd~-~~g~~ll~lY~~Tgd~~yl~~a~~la~~l~~-~~-r~~~---G~fw~~~~-------~~~~~w~D~l~m~~ 149 (373)
T 1nc5_A 83 RRDELDAI-QAGLILFPLYEQTKDERYVKAAKRLRSLYGT-LN-RTSE---GGFWHKDG-------YPYQMWLDGLYMGG 149 (373)
T ss_dssp CTTCGGGT-GGGGGHHHHHHHHCCHHHHHHHHHHHGGGGT-SC-BCTT---SCBCSCTT-------STTEEETHHHHHHH
T ss_pred CCCCcchH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh-cc-CCCC---CCeeccCC-------CCCeEEeCcHHHHH
Confidence 0012222 2456788999999999999999999999853 22 2221 12243211 111222222 2123
Q ss_pred HHHHHHHccCCcchHHHHHHHHHhhhhcccCCCCCCCe
Q 043003 411 KVSRYLFKWTKQVTYADYYERALTNGVLGIQRGTEPGV 448 (855)
Q Consensus 411 kl~~~Lf~~tgd~~YaD~~ERaLyN~iLa~q~~~d~g~ 448 (855)
-+.-++.++|||.+|.|.+++.+-...--..++ +.|.
T Consensus 150 p~L~~l~~~tgd~~y~d~A~~~~~~~~~~l~D~-~tGl 186 (373)
T 1nc5_A 150 PFALKYANLKQETELFDQVVLQESLMRKHTKDA-KTGL 186 (373)
T ss_dssp HHHHHHHHHHTCTHHHHHHHHHHHHHHHHHBCT-TTSC
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHhcCC-CCCC
Confidence 445667899999999999999776655444555 4443
No 24
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=97.76 E-value=0.00012 Score=82.39 Aligned_cols=193 Identities=15% Similarity=0.070 Sum_probs=115.0
Q ss_pred hHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhC-CCcccccCCchhhhhhhccccccccchhhHHHHHHHHHHHHH
Q 043003 170 GHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKI-GTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYTL 248 (855)
Q Consensus 170 Gh~LsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~-~DGYL~a~~~~~~~r~~~l~~~w~pyy~~HkI~aGLld~Y~~ 248 (855)
...+.|++. |..|+|++.++.+.++++.+.+.=... ..||..+.... ++...+.-.+.-.+|.+++ ++..|++
T Consensus 114 Af~i~al~~-~~~tg~~~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d----~~~~~~~~~~n~~m~~~~a-l~~l~~~ 187 (421)
T 2zbl_A 114 FFALLGAAS-AVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEA----FSQTEDYRGGNANMHAVEA-FLIVYDV 187 (421)
T ss_dssp HHHHHHHHH-HHTTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTT----SCSBCSCEEHHHHHHHHHH-HHHHHHT
T ss_pred HHHHHHHHH-HHHhCCccHHHHHHHHHHHHHHHhccCCCCCeeeeecCC----CCcccccCCCcHHHHHHHH-HHHHHHh
Confidence 466678888 889999999999999998887643211 34666665421 1111111011222455655 7799999
Q ss_pred hCChhHHHHHHHHHHHHHHHhhhh-----hhccchhhhcccccc---------------cccch---HHHHHHHHHhc--
Q 043003 249 ANNGQALNITIWMADYFNTRVQNL-----IARSSLERHYQTLND---------------ESGGM---NDVLYKLYGIT-- 303 (855)
Q Consensus 249 TG~~kaL~ia~r~AD~~~~r~~~~-----~~~~~~~~~~~~l~~---------------E~GGm---neaL~~LY~~T-- 303 (855)
||+++.++.|.++++.+..++... .+.+. .-|..+.+ ++|=. .-.|.++|++|
T Consensus 188 tgd~~~~~~A~~~~~~~~~~~~~~~~~~l~~~f~--~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~ 265 (421)
T 2zbl_A 188 THDKKWLDRALRIASVIIHDVARNGDYRVNEHFD--SQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEA 265 (421)
T ss_dssp TCCTHHHHHHHHHHHHHCCCCCGGGTTCCCCEEC--TTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHHhccCCCCchhhhcC--CccccchhccCCCcccccccCCCCCChHHHHHHHHHHHHHHccc
Confidence 999999999999999988765321 00011 11221110 22211 23678999999
Q ss_pred -CC--H-HHHHHHHhcccc---cccccc-ccc----cCC----C-CCCcccCcchHhHHHHHHHHHhCChHHHHHHHHHH
Q 043003 304 -KD--P-KHLKLAELFDKP---CFLGLL-AVK----ADN----I-AGLHANTHIPLVCGVQNRYELTGDEQSMAMGTFFM 366 (855)
Q Consensus 304 -Gd--~-ryL~LA~~F~~~---~~~~~l-a~~----~d~----l-~g~HanthiP~~~G~a~~Y~~TGD~~y~~aa~~fw 366 (855)
|| + +|++.|+.+.+. .++++- ..+ .+. . .......+.-.+.+++.+|++|||++|++.++.+|
T Consensus 266 ~~~~~~~~~l~~A~~l~~~~~~~g~d~~~~GG~~~~~~~~g~~~~~~k~~w~~aea~~all~l~~~tgd~~yl~~a~~~~ 345 (421)
T 2zbl_A 266 RFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWW 345 (421)
T ss_dssp TTCCCCTHHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCTTSCBSCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHhcCCCCCCcEEEeecCCCCccCCCcccHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 66 5 899999765431 122211 000 000 0 00011112223578899999999999999988888
Q ss_pred HHhc
Q 043003 367 DIIN 370 (855)
Q Consensus 367 d~V~ 370 (855)
+.+.
T Consensus 346 ~~~~ 349 (421)
T 2zbl_A 346 DYCI 349 (421)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8774
No 25
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=97.58 E-value=0.00034 Score=77.95 Aligned_cols=189 Identities=11% Similarity=-0.003 Sum_probs=111.1
Q ss_pred hhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhCCCcccccCCchhhhhhhccccccccch-hhHHHHHHHHH---
Q 043003 169 LGHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYY-TIHKIMAGLLD--- 244 (855)
Q Consensus 169 ~Gh~LsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~~~~~~r~~~l~~~w~pyy-~~HkI~aGLld--- 244 (855)
-..++.|++..|..|+|++.++.+.++++.+.+.-...+.|++.+... .|...+. +. .+|.+.+ ++.
T Consensus 124 ~af~~~a~~~~~~atgd~~~~~~A~~l~~~~~~~~~d~~~G~f~~~~~----~~~~~~~----~~~~m~~~~~-~l~l~~ 194 (402)
T 1fp3_A 124 ECFYTMAMNELWRVTAEARYQSEAVDMMDQIVHWVREDPSGLGRPQLP----GAVASES----MAVPMMLLCL-VEQLGE 194 (402)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTCGGGGCCCCCT----TSCCEEE----THHHHHHHHH-HHHHHT
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhccCCCcccCcccc----CccCCCC----cchHHHHHHH-HHHHHH
Confidence 357899999999999999999999999998887653125677643221 1222221 11 1355544 345
Q ss_pred HHHHhCChhHHHHHHHHHHHHHHHhhhh---hhccchhhhccccc------ccccchHH---HHHHHHHhcCCHHHHHHH
Q 043003 245 QYTLANNGQALNITIWMADYFNTRVQNL---IARSSLERHYQTLN------DESGGMND---VLYKLYGITKDPKHLKLA 312 (855)
Q Consensus 245 ~Y~~TG~~kaL~ia~r~AD~~~~r~~~~---~~~~~~~~~~~~l~------~E~GGmne---aL~~LY~~TGd~ryL~LA 312 (855)
.|..++++ .++.+.++++.+.+++..- +...- ..-|.... .+.|=+.+ .|++++++|||++|++.|
T Consensus 195 l~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~e~~-d~dw~~~~~~~g~~~~pgh~ie~~wlL~~a~~~~~~~~~l~~A 272 (402)
T 1fp3_A 195 EDEELAGR-YAQLGHWCARRILQHVQRDGQAVLENV-SEDGEELSGCLGRHQNPGHALEAGWFLLRHSSRSGDAKLRAHV 272 (402)
T ss_dssp TCHHHHHH-THHHHHHHHHHHHTTEETTTTEECSEE-ETTSCBCCHHHHHEECHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHhcCcH-HHHHHHHHHHHHHHHhCcCCCeEEEEE-CCCCCccCCCCCCCCCCCcHHHHHHHHHHHHHHcCChHHHHHH
Confidence 56667544 7888888888776652110 00000 01121110 12221233 588999999999999999
Q ss_pred Hhccccc----cccccccccCCCCC-CcccC---------------cchHhHHHHHHHHHhCChHHHHHHHHHHHHhcc
Q 043003 313 ELFDKPC----FLGLLAVKADNIAG-LHANT---------------HIPLVCGVQNRYELTGDEQSMAMGTFFMDIINS 371 (855)
Q Consensus 313 ~~F~~~~----~~~~la~~~d~l~g-~Hant---------------hiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~ 371 (855)
+...+.. .+++- .+.+.. ...+. |...+.|++.+|++|||++|++.++..|+.+.+
T Consensus 273 ~~~~~~~~~~~~~d~~---~gg~~~~~~~~g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tgd~~yl~~a~~~~~~~~~ 348 (402)
T 1fp3_A 273 IDTFLLLPFRSGWDAD---HGGLFYFQDADGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESGDPALLRLFYQVAEYTFR 348 (402)
T ss_dssp HHHHTHHHHHHHBCTT---TCSBCSCEETTSCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCC---CCCEEEeecCCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 7654321 11110 000000 00011 112367899999999999999999988888754
No 26
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=97.45 E-value=0.0014 Score=76.62 Aligned_cols=253 Identities=12% Similarity=0.041 Sum_probs=134.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhCCCcccccCCchhhhhhhc---cccc---------cccch-------hhHHHHHHHHHHH
Q 043003 186 ETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLEN---LVYV---------WAPYY-------TIHKIMAGLLDQY 246 (855)
Q Consensus 186 ~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~~~~~~r~~~---l~~~---------w~pyy-------~~HkI~aGLld~Y 246 (855)
+.+++.+..-+|.|.+||. ++|++-.- ..+.|.. .|.+ ..+-| ++ ++.|+|..++
T Consensus 190 ~~lldE~rWg~D~llkm~~--~~g~~y~q---Vgd~W~~d~~~R~~~~~~~~~~~~~~~y~~~~~~~ag-l~aAALA~As 263 (586)
T 3h7l_A 190 TRLIEEALFGADFLVRMQN--EKGFFYMT---VFDKWSKDTAQREICAYETQLGHKFDDYQAGFRQGGG-VAIAALAAAS 263 (586)
T ss_dssp HHHHHHHHHHHHHHHHTBC--TTSCBBCE---EECTTCCCGGGCEEEEEETTTTEEESCCBCCGGGTHH-HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhccc--CCCeEEEE---ecCCCCCCCCccccccccCCCCCCCcceecCCCCcHH-HHHHHHHHHh
Confidence 4788888888999999999 88886421 1122321 0100 00111 12 3557776677
Q ss_pred HH-----hCChhHHHHHHHHHHHHHHHhhhhhhccchhhhcccccccccchHHHHHHHHHhcCCHHHHHHHHhccc---c
Q 043003 247 TL-----ANNGQALNITIWMADYFNTRVQNLIARSSLERHYQTLNDESGGMNDVLYKLYGITKDPKHLKLAELFDK---P 318 (855)
Q Consensus 247 ~~-----TG~~kaL~ia~r~AD~~~~r~~~~~~~~~~~~~~~~l~~E~GGmneaL~~LY~~TGd~ryL~LA~~F~~---~ 318 (855)
++ .+.++.|+.|+++.+|+.+....+.... ...+..|+ -+.-+.++||+.|||++||+.|..+.+ .
T Consensus 264 rvf~d~~~~a~~~L~aA~~a~~fa~~~~~~y~~~g-----~~~~~De~-~~~WAA~eLy~ATgd~~YL~~a~~~a~~l~~ 337 (586)
T 3h7l_A 264 RLGVHGEYDQQKYRNAAENGYWHLKEHNTQYLNDG-----EENIIDEY-CALLASVELFKATKETRYLEESRLWAQRLVA 337 (586)
T ss_dssp TSSSCSSSCHHHHHHHHHHHHHHHHHHHHHHSTTS-----CCCHHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHT
T ss_pred cccCCCCcChHHHHHHHHHHHHHHHhcCccccCCC-----CccchhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 76 5567999999999999988654321110 01112343 235688999999999999999986432 1
Q ss_pred ccccc----cccc--cC-CCCCCcccCcchHhHHHHHHHHHhCChHHH----HHHHHHHH---Hhccc--------CeEe
Q 043003 319 CFLGL----LAVK--AD-NIAGLHANTHIPLVCGVQNRYELTGDEQSM----AMGTFFMD---IINSS--------HSYA 376 (855)
Q Consensus 319 ~~~~~----la~~--~d-~l~g~HanthiP~~~G~a~~Y~~TGD~~y~----~aa~~fwd---~V~~~--------~~Y~ 376 (855)
.+.+. .... .+ .-...|....---++.++++.++++|+.++ +..+...+ .++++ +.|+
T Consensus 338 ~~~~~~~~g~~w~~~d~~~r~~~d~a~~gl~~iaLl~l~~~~~d~~~~~~a~~~i~~~~d~~l~~~~~~~npfg~~~~~~ 417 (586)
T 3h7l_A 338 RQMSDEQIQHFWSANQDGSRPYFHAAEAGLPTIALCEYLAIEDDSVQTESVKCIVNRACEFEIKISNKVTNPFGYPRQYV 417 (586)
T ss_dssp TEECCSSCSSEEBSSSSSSSBCCCTTTTTHHHHHHHHHHHHCCSTTTTHHHHHHHHHHHHHHHHHHHSSCCSSCCCCEEE
T ss_pred hccCCccCCCcCCCcccCCcccccccccHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhhhhhhcccccCccccHHHHh
Confidence 11111 0011 11 011233222111135567778999976443 33333333 22211 2455
Q ss_pred ecCCC-CCCCCCCCccccccCCcCc-cccchhhHHHHHHHHHHccCCc----chHHHHHHHHHhhhhcccCCCCCCCeEE
Q 043003 377 TGGTS-HQEFWTDPKRIATALSAET-EESCTTYNMLKVSRYLFKWTKQ----VTYADYYERALTNGVLGIQRGTEPGVMI 450 (855)
Q Consensus 377 TGG~g-~~E~f~~~~~l~~~l~~~~-~ETCat~nmlkl~~~Lf~~tgd----~~YaD~~ERaLyN~iLa~q~~~d~g~~~ 450 (855)
.+..+ ....|+-|..... .... .+.=...|...++-.-+.+++| .+|.|.....+ |=||+. +| -.+.
T Consensus 418 ~~~~~~~~~~y~~p~~~~~--~y~WqGsN~~~an~a~~~~~a~~~~~~~~~~~~y~~~a~~ql-dyiLG~-Np---~~~s 490 (586)
T 3h7l_A 418 KGVNESKRDAFFVAHNNES--GYWWQGENARLGSLATMAYLAQPHIASQEIQQQLSVFAQDAL-NWIVGL-NP---YDMC 490 (586)
T ss_dssp CCTTSCCEEESSCCSSSTT--SSCCCCCHHHHHHHHHHHHHSGGGCCCHHHHHHHHHHHHHHH-HHHBTC-ST---TCCB
T ss_pred hhhccccccccccccCCCC--CCeeeChHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHhh-hhhccC-CC---CCCc
Confidence 43322 1223433322100 1122 3333344555666666678888 77888776654 667775 24 2456
Q ss_pred EecCCCC
Q 043003 451 YMLPLSP 457 (855)
Q Consensus 451 Y~~PL~~ 457 (855)
|+.-.+.
T Consensus 491 ~v~G~G~ 497 (586)
T 3h7l_A 491 MLDGHGR 497 (586)
T ss_dssp CBTTSSS
T ss_pred cEEeeCC
Confidence 6665543
No 27
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.53 E-value=0.0081 Score=68.32 Aligned_cols=174 Identities=11% Similarity=0.030 Sum_probs=95.0
Q ss_pred ChHHHHHHHHHHHHHHHH-----Hhh-CCCccccc--CCchhhhhhhccc-cccccchhhHHHHHHHHHHHHHhCChhHH
Q 043003 185 NETVKQKMDAVMSVLSEC-----QKK-IGTGYLSA--FPSEFFDRLENLV-YVWAPYYTIHKIMAGLLDQYTLANNGQAL 255 (855)
Q Consensus 185 D~~L~~k~d~~Vd~L~~~-----Q~~-~~DGYL~a--~~~~~~~r~~~l~-~~w~pyy~~HkI~aGLld~Y~~TG~~kaL 255 (855)
.+++++.+|.+++.|.+. -.+ .+.=+++- .+... .+.... ..|. |-.+ .++.||..+|+.||+++.+
T Consensus 29 ~~~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-y~~G-v~l~gl~~ay~~Tgd~kY~ 104 (445)
T 3k11_A 29 PEQVKKDIDRVFAYIDKETPARVVDKNTGKVITDYTAMGDEA--QLERGAFRLAS-YEWG-VTYSALIAAAETTGDKRYT 104 (445)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCCEEETTTCCEECCTTTCCTTE--EECCCSSCTTS-HHHH-HHHHHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHHHHHHHHhccCcceeecCCCCceecccccccccc--ccccCCcccCc-cCHH-HHHHHHHHHHHHHCCHHHH
Confidence 467888999999988871 110 01112221 11100 000000 1221 3334 4567899999999999999
Q ss_pred HHHHHHHHHHHHHhhh---hhh-ccch-h----hhc-ccccccccchHHHHHHHHHhcCCHHHHHHHHhcccc---cccc
Q 043003 256 NITIWMADYFNTRVQN---LIA-RSSL-E----RHY-QTLNDESGGMNDVLYKLYGITKDPKHLKLAELFDKP---CFLG 322 (855)
Q Consensus 256 ~ia~r~AD~~~~r~~~---~~~-~~~~-~----~~~-~~l~~E~GGmneaL~~LY~~TGd~ryL~LA~~F~~~---~~~~ 322 (855)
+.+.+.+|++.+.+.. +.. .... . ... ..++ .+|.|..+|+++|+.|+|++|++.|....+. .+..
T Consensus 105 ~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~~r~~~~~~~LD-D~g~~~~~Li~lY~~T~d~~yl~~a~~~ad~L~~~~pR 183 (445)
T 3k11_A 105 DYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLLQILTPHALD-DAGAVCTAMIKLRLKDESLPVDGLIQNYFDFIINKEYR 183 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHSCCSGG-GTHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHTSCB
T ss_pred HHHHHHHHHHHhccchhhhhhhccCCeecccccccCCCcch-hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHcCCC
Confidence 9999999988764321 110 0000 0 000 1122 3466778999999999999999999765331 1110
Q ss_pred ccccccCCCCC-CcccC---cch--Hh-HH---HHHHHHHhCChH--HHHHHHHHHHHh
Q 043003 323 LLAVKADNIAG-LHANT---HIP--LV-CG---VQNRYELTGDEQ--SMAMGTFFMDII 369 (855)
Q Consensus 323 ~la~~~d~l~g-~Hant---hiP--~~-~G---~a~~Y~~TGD~~--y~~aa~~fwd~V 369 (855)
..-.+ .|... ++. .+ ++ +++.+++|||++ |.+.+.+-+...
T Consensus 184 ------t~~Ggf~h~~~~~~q~WiD~lyM~~pfla~~~~~tgd~~~~y~d~A~~q~~~~ 236 (445)
T 3k11_A 184 ------LADGTFARNRPQRNTLWLDDMFMGIPAVAQMSRYDKEAKNKYLAEAVKQFLQF 236 (445)
T ss_dssp ------CTTCCBCBCSSSTTEEETHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHH
T ss_pred ------CCCCceeecCCCCCceEecchhhHHHHHHHHHHHHCCcchHHHHHHHHHHHHH
Confidence 00011 23211 111 11 22 356689999999 876665544443
No 28
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=96.47 E-value=0.014 Score=66.85 Aligned_cols=199 Identities=12% Similarity=0.061 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHhCChhHHHHHHHHHHHHHHHhhhhhhccc-----------hhhhcc----cccccccchHHHHHHHHHh
Q 043003 238 IMAGLLDQYTLANNGQALNITIWMADYFNTRVQNLIARSS-----------LERHYQ----TLNDESGGMNDVLYKLYGI 302 (855)
Q Consensus 238 I~aGLld~Y~~TG~~kaL~ia~r~AD~~~~r~~~~~~~~~-----------~~~~~~----~l~~E~GGmneaL~~LY~~ 302 (855)
++-||+.+|.++|++.+|+.|+.+||.+..-|... .+.+ ....|. ..-.|.|.+..=+.+|.++
T Consensus 110 ~LGGLLSAy~Lsgd~~lL~kA~dLad~LlpAFdTp-tgiP~~~vnl~~g~~~~~~~~~~~~s~lAe~gsl~LEF~~LS~l 188 (478)
T 1nxc_A 110 FVGGLLSAYYLSGEEIFRKKAVELGVKLLPAFHTP-SGIPWALLNMKSGIGRNWPWASGGSSILAEFGTLHLEFMHLSHL 188 (478)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCSS-SSCCCSEEETTTCCEECCTTSGGGCEEHHHHTTCHHHHHHHHHH
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHhhcCC-CCCCcceeecccccCCCCcccCCCCcccccccchhhhHHHHHHH
Confidence 46799999999999999999999999998877521 1110 000111 1123556677778999999
Q ss_pred cCCHHHHHHHHhcccc-----ccccccccccCCCCCCcccCcchH-------hHHHHHHHHHhC--ChHHHHHHHHHHHH
Q 043003 303 TKDPKHLKLAELFDKP-----CFLGLLAVKADNIAGLHANTHIPL-------VCGVQNRYELTG--DEQSMAMGTFFMDI 368 (855)
Q Consensus 303 TGd~ryL~LA~~F~~~-----~~~~~la~~~d~l~g~HanthiP~-------~~G~a~~Y~~TG--D~~y~~aa~~fwd~ 368 (855)
|||++|.+.|++..+. ...+.+....|...|...+.++-+ -.-+.+.|.++| |+.|++.-....+.
T Consensus 189 TGd~~Y~~~a~~~~~~l~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~d~~~~~m~~~a~~~ 268 (478)
T 1nxc_A 189 SGDPVFAEKVMKIRTVLNKLDKPEGLYPNYLNPSSGQWGQHHVSVGGLGDSFYEYLLKAWLMSDKTDLEAKKMYFDAVQA 268 (478)
T ss_dssp HCCTHHHHHHHHHHHHHHHSCCGGGCCCSEECTTTCCBCSCEECSSTTTHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred HCChHHHHHHHHHHHHHHhcCCCCCccccccCCCCCCccCceeeecCCCchHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Confidence 9999999999886431 000000000111112212222211 133567788887 67787776666666
Q ss_pred hcccCeEeecCCCCCCCCCCC---ccccccCCcCccccchhhHHHHHHHHHHccCCcchHHHHHHHH------Hhhhhcc
Q 043003 369 INSSHSYATGGTSHQEFWTDP---KRIATALSAETEESCTTYNMLKVSRYLFKWTKQVTYADYYERA------LTNGVLG 439 (855)
Q Consensus 369 V~~~~~Y~TGG~g~~E~f~~~---~~l~~~l~~~~~ETCat~nmlkl~~~Lf~~tgd~~YaD~~ERa------LyN~iLa 439 (855)
|.+ |+.-.. ..+-.|... ..+. .....=+|=.-+|+-|.-.++......+|++..+.. .|+....
T Consensus 269 i~~-~l~~~~--~~~~~~v~~~~~~~~~---~~~~hL~cF~gG~~aLg~~~~~~~~~~~~l~~a~~l~~tC~~~y~~~~t 342 (478)
T 1nxc_A 269 IET-HLIRKS--SGGLTYIAEWKGGLLE---HKMGHLTCFAGGMFALGADGAPEARAQHYLELGAEIARTCHESYNRTYV 342 (478)
T ss_dssp HHH-HTEEEC--TTSCEEECEEETTEEE---CEEETGGGGHHHHHHHTSTTSCTTCHHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred HHH-HhcccC--CCCcEEEEeccCCccc---ccccchhhhhHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHhccc
Confidence 653 332210 001111110 0111 123456898999988887766544456777777654 4666555
Q ss_pred cCCC
Q 043003 440 IQRG 443 (855)
Q Consensus 440 ~q~~ 443 (855)
+..|
T Consensus 343 gl~P 346 (478)
T 1nxc_A 343 KLGP 346 (478)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 5544
No 29
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=96.08 E-value=0.22 Score=56.42 Aligned_cols=237 Identities=13% Similarity=0.065 Sum_probs=122.9
Q ss_pred ChHHHHHHHHHHHHHHHHHhhCCCcccccCC-chhh--hhhhc------cccccc-----cch-hhHHHHHHHHHHHHHh
Q 043003 185 NETVKQKMDAVMSVLSECQKKIGTGYLSAFP-SEFF--DRLEN------LVYVWA-----PYY-TIHKIMAGLLDQYTLA 249 (855)
Q Consensus 185 D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~-~~~~--~r~~~------l~~~w~-----pyy-~~HkI~aGLld~Y~~T 249 (855)
-+.+++.++.-.|.|.+||. ++|.+-.-- .... ..|.. -|.++. |=- ..-.+-|+|..++++-
T Consensus 89 ~~d~ldeikwg~D~llk~~~--~~g~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~a~~~AAalA~as~vf 166 (433)
T 1ks8_A 89 LDDGRKAVKWATDYFIKAHT--SQNEFYGQVGQGDADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVF 166 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHCC--BTTBEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHhcc--CCCcEEEEeCCCCcCCcccCCHhhCCCCCceeeccCCCCccHHHHHHHHHHHHHHHhc
Confidence 37888999999999999998 555432110 1000 01111 112111 211 1112345565566665
Q ss_pred CC------hhHHHHHHHHHHHHHHHhhhhhhccchhhhcccccccccc---hHHHHHHHHHhcCCHHHHHHHHhcccccc
Q 043003 250 NN------GQALNITIWMADYFNTRVQNLIARSSLERHYQTLNDESGG---MNDVLYKLYGITKDPKHLKLAELFDKPCF 320 (855)
Q Consensus 250 G~------~kaL~ia~r~AD~~~~r~~~~~~~~~~~~~~~~l~~E~GG---mneaL~~LY~~TGd~ryL~LA~~F~~~~~ 320 (855)
.+ ++.|+.|+++-+|..+.-+.......... ... +..+- +.-+-+|||+.|||++||+.|+.+... +
T Consensus 167 k~~D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~~~~--~~Y-~ss~~~DE~~WAAa~Ly~aTgd~~Yl~~~~~~~~~-~ 242 (433)
T 1ks8_A 167 RNVDGTYSNNLLTHARQLFDFANNYRGKYSDSITDAR--NFY-ASADYRDELVWAAAWLYRATNDNTYLNTAESLYDE-F 242 (433)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSGGGG--GTS-CCCCTHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH-T
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcCC--CCC-CCCCcccHHHHHHHHHHHHhCCHHHHHHHHHHHHh-c
Confidence 43 47999999999998865321100000000 000 01111 334778999999999999999875431 1
Q ss_pred ccccccccCCCCCCcccCcchHhHHHH-HHHHHhCChHHHHHHHHHHHHhcccCeEeecCCCCCCCCCCCccccccCCcC
Q 043003 321 LGLLAVKADNIAGLHANTHIPLVCGVQ-NRYELTGDEQSMAMGTFFMDIINSSHSYATGGTSHQEFWTDPKRIATALSAE 399 (855)
Q Consensus 321 ~~~la~~~d~l~g~HanthiP~~~G~a-~~Y~~TGD~~y~~aa~~fwd~V~~~~~Y~TGG~g~~E~f~~~~~l~~~l~~~ 399 (855)
. .. +.. ..+.-.. +..|.. .+.++++++.|++.++.+.+.+...-.+--||..-...|
T Consensus 243 -~---~~-~~~-~~~~Wd~--~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~W------------- 301 (433)
T 1ks8_A 243 -G---LQ-NWG-GGLNWDS--KVSGVQVLLAKLTNKQAYKDTVQSYVNYLINNQQKTPKGLLYIDMW------------- 301 (433)
T ss_dssp -T---GG-GSC-CCCCSSC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTSCBCTTSCBCCCST-------------
T ss_pred -C---cC-cCc-CCcCccc--hhhHHHHHHhhccChHHHHHHHHHHHHHHHhcCCcCCCCceeecCC-------------
Confidence 0 00 000 1111111 123333 345778999999999998888764322222222211111
Q ss_pred ccccchhhHHHHHHHHHHcc-CCcchHHHHHHHHHhhhhcccCCCCCCCeEEEecCCC
Q 043003 400 TEESCTTYNMLKVSRYLFKW-TKQVTYADYYERALTNGVLGIQRGTEPGVMIYMLPLS 456 (855)
Q Consensus 400 ~~ETCat~nmlkl~~~Lf~~-tgd~~YaD~~ERaLyN~iLa~q~~~d~g~~~Y~~PL~ 456 (855)
...=-+.|+.+++-....+ +++.+|.+...+. .|=||+. ++ ..|+.-.+
T Consensus 302 -Gs~~~~~n~a~l~~~~~~~~~~~~~y~~~A~~q-ldYiLG~-n~-----~SyvvG~G 351 (433)
T 1ks8_A 302 -GTLRHAANAAFIMLEAAELGLSASSYRQFAQTQ-IDYALGD-GG-----RSFVCGFG 351 (433)
T ss_dssp -THHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHH-HHHHHTT-TS-----SCCBTTSS
T ss_pred -chhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHh-HhhccCC-CC-----cceEeccC
Confidence 1111122333444444455 7889999988664 6788886 22 25665443
No 30
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=95.83 E-value=0.067 Score=61.76 Aligned_cols=237 Identities=15% Similarity=0.124 Sum_probs=126.6
Q ss_pred HHHHHHHHHhCCC--hHHHHHHHHHHHHHHHHHhhCCCcccccCCchhhhhhhccccccccchhhHHHHHHHHHHHHHh-
Q 043003 173 LSATAMAWASTRN--ETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYTLA- 249 (855)
Q Consensus 173 LsA~A~~~a~t~D--~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~~~~~~r~~~l~~~w~pyy~~HkI~aGLld~Y~~T- 249 (855)
|+-+..|+....+ ..+++..++.++.|.+.-.=..|+-++. |+. ++ -++-||+.+|.++
T Consensus 55 LDTL~IM~~~~~~~~~gl~~Ef~~A~~~V~~~l~F~~d~~Vsv-----FET------------tI-R~LGGLLSAy~Ls~ 116 (511)
T 1dl2_A 55 VDTLMLMYNSSTLYKSEFEAEIQRSEHWINDVLDFDIDAEVNV-----FET------------TI-RMLGGLLSAYHLSD 116 (511)
T ss_dssp HHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHTCCCCCSSEEEH-----HHH------------HH-HHHHHHHHHHHHHH
T ss_pred ccceEEeccccccccCCcHHHHHHHHHHHHHhcCCCCCceech-----hhe------------eh-hhhhhhhhHHHhcc
Confidence 4445555322211 3677777777777765222001222221 211 12 1467999999999
Q ss_pred -----CChhHHHHHHHHHHHHHHHhh-hhhhccch-----------hhhcc---cccccccchHHHHHHHHHhcCCHHHH
Q 043003 250 -----NNGQALNITIWMADYFNTRVQ-NLIARSSL-----------ERHYQ---TLNDESGGMNDVLYKLYGITKDPKHL 309 (855)
Q Consensus 250 -----G~~kaL~ia~r~AD~~~~r~~-~~~~~~~~-----------~~~~~---~l~~E~GGmneaL~~LY~~TGd~ryL 309 (855)
|++.+|+.|+.+||.+..-|. .. .+.+. ..+|. ..-.|.|.+..=+.+|.++|||++|.
T Consensus 117 ~~~~~~d~~lL~kA~dLadrLlpAFd~Tp-tgiP~~~vnl~~g~~~~~~~~~~~s~~Ae~gSl~LEF~~LS~LTGd~~Y~ 195 (511)
T 1dl2_A 117 VLEVGNKTVYLNKAIDLGDRLALAFLSTQ-TGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKYLAYLTGNRTYW 195 (511)
T ss_dssp HHTCSCHHHHHHHHHHHHHHHHGGGGSSS-SSCCCSEEETTTCCEECCSSGGGCEEHHHHSSCHHHHHHHHHHHTCHHHH
T ss_pred cccCCCcHHHHHHHHHHHHHHHHhhcCCC-CCCCCceeecccCCCCCCCCCCcccccccccceeeeHHHHHHHHCChHHH
Confidence 999999999999999998776 21 11110 01111 11235666777889999999999999
Q ss_pred HHHHhcccc---------ccccccccccCCCCCCcccCcchH-------hHHHHHHHHHhCChHHHHHHHHHHHHhcccC
Q 043003 310 KLAELFDKP---------CFLGLLAVKADNIAGLHANTHIPL-------VCGVQNRYELTGDEQSMAMGTFFMDIINSSH 373 (855)
Q Consensus 310 ~LA~~F~~~---------~~~~~la~~~d~l~g~HanthiP~-------~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~~ 373 (855)
+.|++..+. ...+.+...-|...|...+.++-+ ..-+.+.|.+++|+.|++.-....+.|.+ |
T Consensus 196 ~~a~r~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~lGa~~DS~YEYLlK~~il~~d~~y~~m~~~a~~~i~~-~ 274 (511)
T 1dl2_A 196 ELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSRGDSFYEYLLKQYLLTHETLYYDLYRKSMEGMKK-H 274 (511)
T ss_dssp HHHHTTHHHHHHHHTHHHHHTTCCBSEECTTTCCBCSCCBCSSTTTHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHhcccccCCCCCCcceEEcCCCCCccCCeeeecCCCCcHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-H
Confidence 999876431 010100011111112211122111 13467788888999888776666666653 3
Q ss_pred eEeecCCC----CCCCCCC-CccccccCCcCccccchhhHHHHHHHHHHccC---------CcchHHHHHHHHH
Q 043003 374 SYATGGTS----HQEFWTD-PKRIATALSAETEESCTTYNMLKVSRYLFKWT---------KQVTYADYYERAL 433 (855)
Q Consensus 374 ~Y~TGG~g----~~E~f~~-~~~l~~~l~~~~~ETCat~nmlkl~~~Lf~~t---------gd~~YaD~~ERaL 433 (855)
+.-....+ .+|.-.. ...+. .....=+|=.-+|+-|.-. ..+. .+.+|.+..++..
T Consensus 275 L~~~~~~~~~~~~~~~~~~~~g~~~---~~~~hL~cF~gG~~aLg~~-~~~~~~~a~~~~~~~~~~~~~a~~l~ 344 (511)
T 1dl2_A 275 LLAQSKPSSLWYIGEREQGLHGQLS---PKMDHLVCFMGGLLASGST-EGLSIHEARRRPFFSKSDWDLAKGIT 344 (511)
T ss_dssp TEEECTTTCCEEECBBTTCTTSCCB---CEEEGGGGGHHHHHHHHHH-TTCCHHHHTTSTTCCHHHHHHHHHHH
T ss_pred hccCCCCCCcEEEEEeecCCCCccc---cccchhhhchhHHHHhccc-cCCChhhhhhcccccHHHHHHHHHHH
Confidence 33111000 0111000 01111 1334568999999888762 1221 1235777776654
No 31
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=95.82 E-value=0.029 Score=63.02 Aligned_cols=191 Identities=13% Similarity=0.034 Sum_probs=103.9
Q ss_pred hHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHHHHhhC----CCcccccCCchhhhhhhc-cccccccchhhHHHHHHHH
Q 043003 170 GHYLSATAMAWASTRNETVKQK-MDAVMSVLSECQKKI----GTGYLSAFPSEFFDRLEN-LVYVWAPYYTIHKIMAGLL 243 (855)
Q Consensus 170 Gh~LsA~A~~~a~t~D~~L~~k-~d~~Vd~L~~~Q~~~----~DGYL~a~~~~~~~r~~~-l~~~w~pyy~~HkI~aGLl 243 (855)
.=++-++..++..++|+++.+. +.++++.|.+.-+.. .... ..|- .+ .|.. ..-.|+-=.+| |+..|+
T Consensus 168 AG~l~aLl~L~~~~~~~~~~~~~i~~i~~~ii~~g~~~~~~~~~~~--~~pl-~~-~w~~~~~~G~aHG~aG--I~~~Ll 241 (411)
T 3e6u_A 168 IGYIYALLFVNKNFGVEKIPQSHIQQICETILTSGENLARKRNFTA--KSPL-MY-EWYQEYYVGAAHGLAG--IYYYLM 241 (411)
T ss_dssp HHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHHHHHTTTTT--TCSC-CC-CBTTBCBCSTTTSHHH--HHHHHT
T ss_pred HHHHHHHHHHHHHcCCccchHHHHHHHHHHHHHHHHHHHHhccccC--CCCc-ce-eecCccCCcccccHHH--HHHHHH
Confidence 4466677777788888765443 566666666543210 0000 0000 00 1111 00111111112 445566
Q ss_pred HHHHHhCChhHHHHHHHHHHHHHHHhhhhhhccchh--hhcc-ccccccc--chHHHHHHHHHhcCCHHHHHHHHhcccc
Q 043003 244 DQYTLANNGQALNITIWMADYFNTRVQNLIARSSLE--RHYQ-TLNDESG--GMNDVLYKLYGITKDPKHLKLAELFDKP 318 (855)
Q Consensus 244 d~Y~~TG~~kaL~ia~r~AD~~~~r~~~~~~~~~~~--~~~~-~l~~E~G--GmneaL~~LY~~TGd~ryL~LA~~F~~~ 318 (855)
..++.+++++.++.+.+..+|+.+...+- ..++.. .... ..+==+| |+..++..+++.++|++|++.|+...+.
T Consensus 242 ~~~~~~~~~~~~~~i~~~l~~l~~~~~~~-g~wp~~~~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~ 320 (411)
T 3e6u_A 242 QPSLQVSQGKLHSLVKPSVDYVCQLKFPS-GNYPPCIGDNRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLCDAYQCADV 320 (411)
T ss_dssp CGGGCCCHHHHHHTHHHHHHHHHHTCCTT-SCCCSBTTCCCCCCCSSSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHhhcChHHHHHHHHHHHHHHHHhhccC-CCCCCCCCcccCccccccCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 67788999999999999999998764320 111110 0000 0000134 7889999999999999999999865431
Q ss_pred ccccccccccCCCCCCcccCcchHhHHHHHHHHHhCChHHHHHHHHHHHHhcc
Q 043003 319 CFLGLLAVKADNIAGLHANTHIPLVCGVQNRYELTGDEQSMAMGTFFMDIINS 371 (855)
Q Consensus 319 ~~~~~la~~~d~l~g~HanthiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~ 371 (855)
.+-..+. .....-.|-... +...+.++|+.|+|++|++.+..+.+.+.+
T Consensus 321 ~~~~g~~--~~~~~lChG~aG--~~~~ll~~~~~t~~~~~~~~A~~~~~~~~~ 369 (411)
T 3e6u_A 321 IWQYGLL--KKGYGLCHGSAG--NAYAFLTLYNLTQDMKYLYRACKFAEWCLE 369 (411)
T ss_dssp HHHHCSB--TTCSCSTTSHHH--HHHHHHHHHHHHCCHHHHHHHHHHHHHHTT
T ss_pred HHhcCcc--CCCCceecChHH--HHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 1100000 000011121000 112346779999999999999999998875
No 32
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=95.39 E-value=0.67 Score=52.54 Aligned_cols=239 Identities=13% Similarity=0.059 Sum_probs=120.7
Q ss_pred hHHHHHHHHHHHHHHHHHhhCCCccccc-CCchhh--hhhh---c---cccc-cc-----cchh-hHHHHHHHHHHHHHh
Q 043003 186 ETVKQKMDAVMSVLSECQKKIGTGYLSA-FPSEFF--DRLE---N---LVYV-WA-----PYYT-IHKIMAGLLDQYTLA 249 (855)
Q Consensus 186 ~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a-~~~~~~--~r~~---~---l~~~-w~-----pyy~-~HkI~aGLld~Y~~T 249 (855)
+.+++.+..-.|.|.+|+. .+|.+-. ...... ..|. . .|.. |. |=-. .-.+-|+|..++++-
T Consensus 92 ~d~ldeikwg~D~llk~~~--~~~~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~~y~~~~~~p~sd~a~~~AAalAaas~vf 169 (441)
T 1ia6_A 92 TKMLQQLKYFTDYFLKSHP--NSTTFYYQVGEGNADHTYWGAPEEQTGQRPSLYKADPSSPASDILSETSAALTLMYLNY 169 (441)
T ss_dssp HHHHHHHHHHHHHHHHTCC--STTCEEEEESCHHHHTTCCSCGGGCCSCCCCCEEEBTTBCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcc--CCCcEEEEeCCCCccccccCChhhCCCCCceeeEeCCCCCccHHHHHHHHHHHHHHHhc
Confidence 7888899999999999965 3332211 111000 0111 1 1111 10 1011 112345566666665
Q ss_pred CC------hhHHHHHHHHHHHHHHHhhhhhhccchhhhcc--cccccccchHHHHHHHHHhcCCHHHHHHHHhccccccc
Q 043003 250 NN------GQALNITIWMADYFNTRVQNLIARSSLERHYQ--TLNDESGGMNDVLYKLYGITKDPKHLKLAELFDKPCFL 321 (855)
Q Consensus 250 G~------~kaL~ia~r~AD~~~~r~~~~~~~~~~~~~~~--~l~~E~GGmneaL~~LY~~TGd~ryL~LA~~F~~~~~~ 321 (855)
.+ ++.|+.|+++-+|..+.-+. ........ ....| +.-+-+|||+.|||++||+.|+.+....
T Consensus 170 k~~D~~yA~~~L~~A~~~~~fa~~~~g~----~~~~~~Y~ss~~~DE---~~WAAa~Ly~aTgd~~Yl~~a~~~~~~~-- 240 (441)
T 1ia6_A 170 KNIDSAYATKCLNAAKELYAMGKANQGV----GNGQSFYQATSFGDD---LAWAATWLYTATNDSTYITDAEQFITLG-- 240 (441)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHSCSC----CCCTTTSCCCCSHHH---HHHHHHHHHHHHCCTHHHHHHHHHTTC---
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHcCCC----CCCCCCCCCCCchhH---HHHHHHHHHHHhCCHHHHHHHHHHHhhh--
Confidence 54 57899999999998764211 00000000 01112 3457789999999999999998764321
Q ss_pred cccccccCCCCCCcccCcchHhHHHHH-HHHHhCChHHHHHHHHHHHHhcccCeEeecCCCCCCCCCCCccccccCCcCc
Q 043003 322 GLLAVKADNIAGLHANTHIPLVCGVQN-RYELTGDEQSMAMGTFFMDIINSSHSYATGGTSHQEFWTDPKRIATALSAET 400 (855)
Q Consensus 322 ~~la~~~d~l~g~HanthiP~~~G~a~-~Y~~TGD~~y~~aa~~fwd~V~~~~~Y~TGG~g~~E~f~~~~~l~~~l~~~~ 400 (855)
.............|.-.. +..|+.. +.++++++.|++.++.+.+.....-.+--||..-.-.|+. .++
T Consensus 241 ~~~~~~~~~~~~~~~Wd~--~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~WGs---------~~~ 309 (441)
T 1ia6_A 241 NTMNENKMQDKWTMCWDD--MYVPAALRLAQITGKQIYKDAIEFNFNYWKTQVTTTPGGLKWLSNWGV---------LRY 309 (441)
T ss_dssp -----CGGGCSSCSSSSC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTSCBCTTSCBCCCSTTH---------HHH
T ss_pred hhcccccccCCCcCCccc--hHHHHHHHHHhccCcHHHHHHHHHHHHHHHhhcccCCCCceecCCcch---------HHH
Confidence 000000000011111111 1234433 4677899999998888766554221222244331111210 011
Q ss_pred cccchhhHHHHHHHHHHccCCcchHHHHHHHHHhhhhcccCCCCCCCeEEEecCCC
Q 043003 401 EESCTTYNMLKVSRYLFKWTKQVTYADYYERALTNGVLGIQRGTEPGVMIYMLPLS 456 (855)
Q Consensus 401 ~ETCat~nmlkl~~~Lf~~tgd~~YaD~~ERaLyN~iLa~q~~~d~g~~~Y~~PL~ 456 (855)
+.|+.+++..-..++++.+|.+...+ -.|=||+. +| ..+.|+.-.+
T Consensus 310 -----~~~~a~l~~~~~~~~~~~~y~~~A~~-qldYiLG~-NP---~~~SyvvG~G 355 (441)
T 1ia6_A 310 -----AAAESMVMLVYCKQNPDQSLLDLAKK-QVDYILGD-NP---ANMSYIIGYG 355 (441)
T ss_dssp -----HHHHHHHHHHHHHHSCCHHHHHHHHH-HHHHHHTC-ST---TCCCSBTTSS
T ss_pred -----HHHHHHHHHHHHhhcCHHHHHHHHHH-HHHHhcCC-CC---CCceeEEecC
Confidence 12334444444456788899998866 46788885 34 2346665443
No 33
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=95.10 E-value=0.15 Score=59.00 Aligned_cols=197 Identities=13% Similarity=0.111 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHhCChhHHHHHHHHHHHHHHHhhhhhhccch-----------hhhcc--cccccccchHHHHHHHHHhcC
Q 043003 238 IMAGLLDQYTLANNGQALNITIWMADYFNTRVQNLIARSSL-----------ERHYQ--TLNDESGGMNDVLYKLYGITK 304 (855)
Q Consensus 238 I~aGLld~Y~~TG~~kaL~ia~r~AD~~~~r~~~~~~~~~~-----------~~~~~--~l~~E~GGmneaL~~LY~~TG 304 (855)
++-||+.+|.++|++.+|+.|+.+||.+..-|... .+.+. ...|. ..-.|.|.+..-+.+|.++||
T Consensus 174 ~LGGLLSAy~Lsgd~~lL~kA~dLadrLlpAFdTp-tgiP~~~vnl~~g~~~~~~~~~~s~lAe~GSl~LEF~~LS~LTG 252 (538)
T 1x9d_A 174 ILGGLLSAYHLSGDSLFLRKAEDFGNRLMPAFRTP-SKIPYSDVNIGTGVAHPPRWTSDSTVAEVTSIQLEFRELSRLTG 252 (538)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCST-TSCCCSEEETTTCCEECCTTCSEEEHHHHHSSHHHHHHHHHHHC
T ss_pred hhhhhhhHHHhcCCHHHHHHHHHHHHHHHHhhcCC-CCCCcceeeecccccCCCCcCCCceeccccceeeeHHHHHHHhC
Confidence 46799999999999999999999999998777421 11110 00111 111255667778899999999
Q ss_pred CHHHHHHHHhcccc------ccccccccccCCCCCCcccC-cchH-------hHHHHHHHHHhC--ChHHHHHHHHHHHH
Q 043003 305 DPKHLKLAELFDKP------CFLGLLAVKADNIAGLHANT-HIPL-------VCGVQNRYELTG--DEQSMAMGTFFMDI 368 (855)
Q Consensus 305 d~ryL~LA~~F~~~------~~~~~la~~~d~l~g~Hant-hiP~-------~~G~a~~Y~~TG--D~~y~~aa~~fwd~ 368 (855)
|++|.+.|++..+. ...+.+...-|...|...+. ++-+ ..-+.+.|.++| |+.|++.-....+.
T Consensus 253 d~~Y~~~a~r~~~~l~~~~~~~~GL~p~~i~~~tG~~~~~~~~~lGa~~DS~YEYLlK~~il~g~~d~~y~~my~~a~~~ 332 (538)
T 1x9d_A 253 DKKFQEAVEKVTQHIHGLSGKKDGLVPMFINTHSGLFTHLGVFTLGARADSYYEYLLKQWIQGGKQETQLLEDYVEAIEG 332 (538)
T ss_dssp CTHHHHHHHHHHHHHHTCSCCBTTBCCSEEETTTCCEESTTEECSSTTTHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhcccCCCCCcceEEeCCCCCccCCcceeecCCccHHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Confidence 99999999876431 01000000011111211111 1111 134577889999 78887766666666
Q ss_pred hcccCeEeecCCCCCCCCCCC---ccccccCCcCccccchhhHHHHHHHHHHccCCcchHHHHHHHH------Hhhhhcc
Q 043003 369 INSSHSYATGGTSHQEFWTDP---KRIATALSAETEESCTTYNMLKVSRYLFKWTKQVTYADYYERA------LTNGVLG 439 (855)
Q Consensus 369 V~~~~~Y~TGG~g~~E~f~~~---~~l~~~l~~~~~ETCat~nmlkl~~~Lf~~tgd~~YaD~~ERa------LyN~iLa 439 (855)
|.+ |++-... ..+-.|... ..+. .....=+|=.-+|+-|.-.++ ...+|++..++. +|+....
T Consensus 333 i~~-~L~~~~~-~~~~~~v~~~~~g~~~---~~~~hL~cF~gG~~aLgg~~~---~~~~~l~~a~~L~~tC~~~Y~~~~t 404 (538)
T 1x9d_A 333 VRT-HLLRHSE-PSKLTFVGELAHGRFS---AKMDHLVCFLPGTLALGVYHG---LPASHMELAQELMETCYQMNRQMET 404 (538)
T ss_dssp HHH-HTEEECT-TTCCEEECEEETTEEE---CEEEGGGGHHHHHHHHHHHTT---CCHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred HHH-HhccCCC-CCCceEEEeccCCccC---cccchHhhhhhhHHHhcCccc---CcHHHHHHHHHHHHHHHHHHHhccc
Confidence 653 3322110 000001100 0111 134557899999999998774 345566666544 3555444
Q ss_pred cCCC
Q 043003 440 IQRG 443 (855)
Q Consensus 440 ~q~~ 443 (855)
+..|
T Consensus 405 Gl~P 408 (538)
T 1x9d_A 405 GLSP 408 (538)
T ss_dssp SCCC
T ss_pred CCCc
Confidence 4434
No 34
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=94.53 E-value=0.92 Score=53.48 Aligned_cols=178 Identities=12% Similarity=-0.010 Sum_probs=92.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhhCCCcccccC-Cc--hhhhhhh---c---cccccc-----cch-hhHHHHHHHHHHHHHh
Q 043003 185 NETVKQKMDAVMSVLSECQKKIGTGYLSAF-PS--EFFDRLE---N---LVYVWA-----PYY-TIHKIMAGLLDQYTLA 249 (855)
Q Consensus 185 D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~-~~--~~~~r~~---~---l~~~w~-----pyy-~~HkI~aGLld~Y~~T 249 (855)
-+.+++.++.-.|.|.+||. .+|.+-.- .. ..-..|. . .+..+. |=- ..-..-|+|.+++++-
T Consensus 90 ~~d~ldeikwg~Dyllk~~~--~~~~~y~qVGdg~~DH~~w~~pe~m~~~r~~y~~~~~~pgsd~a~~~AAAlAaAS~vf 167 (605)
T 1tf4_A 90 MPYLKDNLRWVNDYFIKAHP--SPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVF 167 (605)
T ss_dssp HHHHHHHHHHHHHHHHHTCS--BTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhcc--CCCeEEEEeCCCCcCccccCChhhCCCCCceeEecCCCCcchHHHHHHHHHHHHHhhc
Confidence 37788999999999999997 44322211 00 0001111 1 111111 100 1112446666666666
Q ss_pred CC------hhHHHHHHHHHHHHHHHhhhhhhccchhhhc---ccccccccchHHHHHHHHHhcCCHHHHHHHHhcccccc
Q 043003 250 NN------GQALNITIWMADYFNTRVQNLIARSSLERHY---QTLNDESGGMNDVLYKLYGITKDPKHLKLAELFDKPCF 320 (855)
Q Consensus 250 G~------~kaL~ia~r~AD~~~~r~~~~~~~~~~~~~~---~~l~~E~GGmneaL~~LY~~TGd~ryL~LA~~F~~~~~ 320 (855)
.+ ++.|+.|+++-+|..+.-+............ .....| +.-+-+|||+.|||++||+.|+.+....-
T Consensus 168 k~~D~~yA~~~L~~Ak~~~~fA~~~~g~y~~~~~~~~~Y~s~s~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~~~~~~ 244 (605)
T 1tf4_A 168 ADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAFYNSWSGYQDE---LVWGAYWLYKATGDDSYLAKAEYEYDFLS 244 (605)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTTHHHHCCSSCSHHH---HHHHHHHHHHHHCCHHHHHHHHHHGGGSC
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCCccccccCCCCCchH---HHHHHHHHHHHhCCHHHHHHHHHHHHhcc
Confidence 53 4799999999999876422110000000000 001112 34577899999999999999987543210
Q ss_pred ccccccccCCCCCCcccCcchHhHHHHH-HHHHhCChHHHHHHHHHHHHhc
Q 043003 321 LGLLAVKADNIAGLHANTHIPLVCGVQN-RYELTGDEQSMAMGTFFMDIIN 370 (855)
Q Consensus 321 ~~~la~~~d~l~g~HanthiP~~~G~a~-~Y~~TGD~~y~~aa~~fwd~V~ 370 (855)
... ........+.|.-.. +..|+.. +.++++++.|++.++.+.+...
T Consensus 245 ~~~-~~~~~~~~~~~~Wd~--~~~g~~~lla~~~~~~~y~~~a~~~~~~~~ 292 (605)
T 1tf4_A 245 TEQ-QTDLRSYRWTIAWDD--KSYGTYVLLAKETGKQKYIDDANRWLDYWT 292 (605)
T ss_dssp BCT-TSSCBCCSSCCSSSC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHTT
T ss_pred ccc-ccccccccccccccc--hHHHHHHHHHhccChHHHHHHHHHHHHHHh
Confidence 000 000000001111111 1345443 3678999999999999888664
No 35
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=94.25 E-value=0.22 Score=55.92 Aligned_cols=133 Identities=14% Similarity=0.081 Sum_probs=86.4
Q ss_pred hhHHHHHHHHHH----HhCCChHHHHHHHHHHHHHHHHHhhCCCcccccCCchhhhhhhccccccccchhhHH-HHHHHH
Q 043003 169 LGHYLSATAMAW----ASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHK-IMAGLL 243 (855)
Q Consensus 169 ~Gh~LsA~A~~~----a~t~D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~~~~~~r~~~l~~~w~pyy~~Hk-I~aGLl 243 (855)
+.|=+++.++++ ..++|+++++.+...++.+.+.|. ++|. +|....+ .++.-.-||.|=- |...++
T Consensus 229 ~aHG~aGI~~~Ll~~~~~~~~~~~~~~i~~~l~~l~~~~~--~~g~---wp~~~~~----~~~~~~~wChG~~Gi~~~l~ 299 (411)
T 3e6u_A 229 AAHGLAGIYYYLMQPSLQVSQGKLHSLVKPSVDYVCQLKF--PSGN---YPPCIGD----NRDLLVHWCHGAPGVIYMLI 299 (411)
T ss_dssp TTTSHHHHHHHHTCGGGCCCHHHHHHTHHHHHHHHHHTCC--TTSC---CCSBTTC----CCCCCCSSSSSHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHhhc--cCCC---CCCCCCc----ccCccccccCCcHHHHHHHH
Confidence 355566655554 467899999999999999999887 6664 3321111 1111112443221 444577
Q ss_pred HHHHHhCChhHHHHHHHHHHHHHHHhhhhhhccchhhhcccccccccchHHHHHHHHHhcCCHHHHHHHHhcccc
Q 043003 244 DQYTLANNGQALNITIWMADYFNTRVQNLIARSSLERHYQTLNDESGGMNDVLYKLYGITKDPKHLKLAELFDKP 318 (855)
Q Consensus 244 d~Y~~TG~~kaL~ia~r~AD~~~~r~~~~~~~~~~~~~~~~l~~E~GGmneaL~~LY~~TGd~ryL~LA~~F~~~ 318 (855)
.+++++++++.++.|.+.++.+.++- ...... ..-|.- .|+-+.|.++|+.|||++|++.|..|.+.
T Consensus 300 ~~~~~~~~~~~~~~a~~~~~~~~~~g------~~~~~~-~lChG~-aG~~~~ll~~~~~t~~~~~~~~A~~~~~~ 366 (411)
T 3e6u_A 300 QAYKVFREEKYLCDAYQCADVIWQYG------LLKKGY-GLCHGS-AGNAYAFLTLYNLTQDMKYLYRACKFAEW 366 (411)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHC------SBTTCS-CSTTSH-HHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHhcC------ccCCCC-ceecCh-HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 89999999999999999887665431 000000 011221 26778999999999999999999988653
No 36
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=94.10 E-value=2.2 Score=48.74 Aligned_cols=174 Identities=12% Similarity=0.081 Sum_probs=91.4
Q ss_pred ChHHHHHHHHHHHHHHHHHhhCCCccccc-CCch--hhhhhhc------cccccc-----cchhh-HHHHHHHHHHHHHh
Q 043003 185 NETVKQKMDAVMSVLSECQKKIGTGYLSA-FPSE--FFDRLEN------LVYVWA-----PYYTI-HKIMAGLLDQYTLA 249 (855)
Q Consensus 185 D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a-~~~~--~~~r~~~------l~~~w~-----pyy~~-HkI~aGLld~Y~~T 249 (855)
-+.+++.+..-.|.|.+|+. .+|-+-. .... --..|.. .|..|. |=-.. -.+-|+|..++++-
T Consensus 111 ~~d~ldeikwg~D~llk~~~--~~~~~y~qVgd~~~Dh~~W~~pe~~~~~R~~y~i~~~~pgsd~a~e~AAAlAaAS~vf 188 (466)
T 2xfg_A 111 YNHILNNIKWACDYFIKCHP--EKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVAETSAALAIASIIF 188 (466)
T ss_dssp HHHHHHHHHHHHHHHHHTCS--BTTEEEEEESCHHHHHTCCSCGGGCCSCCCEEEEESSSCCHHHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHhcc--CCCcEEEEeCCCCccccccCCcccCCCCCceeEecCCCCccHHHHHHHHHHHHHHHhc
Confidence 37889999999999999965 3332211 1110 0001211 111110 11111 12345565666666
Q ss_pred CC------hhHHHHHHHHHHHHHHHhhhhhhccchh-hhc---ccccccccchHHHHHHHHHhcCCHHHHHHHHhccccc
Q 043003 250 NN------GQALNITIWMADYFNTRVQNLIARSSLE-RHY---QTLNDESGGMNDVLYKLYGITKDPKHLKLAELFDKPC 319 (855)
Q Consensus 250 G~------~kaL~ia~r~AD~~~~r~~~~~~~~~~~-~~~---~~l~~E~GGmneaL~~LY~~TGd~ryL~LA~~F~~~~ 319 (855)
.+ ++.|+.|+++-+|..+.-... ..... ... .....| +.-+-+|||+.|||++||+.|+.+...
T Consensus 189 k~~D~~yA~~~L~~Ak~l~~fA~~~~~~~--~~~~~~~~Y~s~s~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~~~~- 262 (466)
T 2xfg_A 189 KKVDGEYSKECLKHAKELFEFADTTKSDD--GYTAANGFYNSWSGFYDE---LSWAAVWLYLATNDSSYLDKAESYSDK- 262 (466)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHHCCCT--TCCTTTTTSCCSSCSHHH---HHHHHHHHHHHHCCHHHHHHHHHTTTT-
T ss_pred cccCHHHHHHHHHHHHHHHHHHHhcCCcC--CCCccccccCCCCCCchH---HHHHHHHHHHHhCCHHHHHHHHHHHHH-
Confidence 54 579999999999988754321 00000 000 001112 344778999999999999999876432
Q ss_pred cccccccccC--CCCCCcccCcchHhHHHHH-HHHHhCCh-HHHHHHHHHHHHhc
Q 043003 320 FLGLLAVKAD--NIAGLHANTHIPLVCGVQN-RYELTGDE-QSMAMGTFFMDIIN 370 (855)
Q Consensus 320 ~~~~la~~~d--~l~g~HanthiP~~~G~a~-~Y~~TGD~-~y~~aa~~fwd~V~ 370 (855)
+ .. ..+.. ...+.+.-.. +..|+.. +.++++++ .|++.++.+.+...
T Consensus 263 ~-~~-~~~~~~~~~~~~~~Wd~--~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~ 313 (466)
T 2xfg_A 263 W-GY-EPQTNIPKYKWAQCWDD--VTYGTYLLLARIKNDNGKYKEAIERHLDWWT 313 (466)
T ss_dssp S-CB-STTSSSBCCSSCCBTTB--CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHT
T ss_pred h-cc-ccccccccccCcCCcch--hHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Confidence 1 10 00000 0001111111 2345554 46778877 89888888777654
No 37
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=94.01 E-value=2.3 Score=50.18 Aligned_cols=174 Identities=12% Similarity=0.050 Sum_probs=92.4
Q ss_pred ChHHHHHHHHHHHHHHHHHhhCCCccccc-CCc-----hhhhhhhc---cccccc-----cchh-hHHHHHHHHHHHHHh
Q 043003 185 NETVKQKMDAVMSVLSECQKKIGTGYLSA-FPS-----EFFDRLEN---LVYVWA-----PYYT-IHKIMAGLLDQYTLA 249 (855)
Q Consensus 185 D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a-~~~-----~~~~r~~~---l~~~w~-----pyy~-~HkI~aGLld~Y~~T 249 (855)
-+.+++.++.-.|.|.+|+. .+|-+-. ... ..+.+-|. .+..|. |=-. .-.+-|+|..++++-
T Consensus 90 ~~d~ldeikwg~Dyllk~~~--~~~~~y~qVGdg~~DH~~w~~pe~~~~~r~~y~v~~~~pgsd~a~e~AAAlAaAS~vf 167 (614)
T 1g87_A 90 TKYIMDGIKWANDYFIKCNP--TPGVYYYQVGDGGKDHSWWGPAEVMQMERPSFKVDASKPGSAVCASTAASLASAAVVF 167 (614)
T ss_dssp HHHHHHHHHHHHHHHHHTCC--STTCEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcc--CCCcEEEEecCCCcCccccCCcccCCCCCcceEecCCCCccHHHHHHHHHHHHHHHhc
Confidence 46888999999999999965 3332211 000 00111111 111110 1111 112345566666665
Q ss_pred CC------hhHHHHHHHHHHHHHHHhhhhhhccchhhhcccccccccc---hHHHHHHHHHhcCCHHHHHHHHhcccccc
Q 043003 250 NN------GQALNITIWMADYFNTRVQNLIARSSLERHYQTLNDESGG---MNDVLYKLYGITKDPKHLKLAELFDKPCF 320 (855)
Q Consensus 250 G~------~kaL~ia~r~AD~~~~r~~~~~~~~~~~~~~~~l~~E~GG---mneaL~~LY~~TGd~ryL~LA~~F~~~~~ 320 (855)
.+ ++.|+.|+++-+|..+.-... ......... +..|- +.-+-+|||+.|||++||+.|+.+....
T Consensus 168 k~~D~~yA~~~L~~Ak~l~~fA~~~~~~~----~~~~~~~~Y-~ss~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~- 241 (614)
T 1g87_A 168 KSSDPTYAEKCISHAKNLFDMADKAKSDA----GYTAASGYY-SSSSFYDDLSWAAVWLYLATNDSTYLDKAESYVPNW- 241 (614)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHHCCCT----TCCTTTTTS-CCSCSHHHHHHHHHHHHHHHCCHHHHHHHHHTGGGS-
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHcCCCC----CCCcCcCCc-CCCCchhHHHHHHHHHHHHhCCHHHHHHHHHHHHhh-
Confidence 54 579999999999988753221 100000000 11111 3447789999999999999998765321
Q ss_pred ccccccccC--CCCCCcccCcchHhHHHHH-HHHHhCChHHHHHHHHHHHHhc
Q 043003 321 LGLLAVKAD--NIAGLHANTHIPLVCGVQN-RYELTGDEQSMAMGTFFMDIIN 370 (855)
Q Consensus 321 ~~~la~~~d--~l~g~HanthiP~~~G~a~-~Y~~TGD~~y~~aa~~fwd~V~ 370 (855)
.. ..+.. ...+.+.-.. +..|+.. +.++++++.|++.++.+.+...
T Consensus 242 -~~-~~~~~~~~~~~~~~Wd~--~~~g~~~lla~~~~~~~~~~~~~~~~~~~~ 290 (614)
T 1g87_A 242 -GK-EQQTDIIAYKWGQCWDD--VHYGAELLLAKLTNKQLYKDSIEMNLDFWT 290 (614)
T ss_dssp -CB-CTTSSSBCCSSCCBTTB--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHT
T ss_pred -cc-ccccccccccCCcCccc--hHHHHHHHHHhccCcHHHHHHHHHHHHHhh
Confidence 10 00000 0011111111 1345544 4778999999999998887654
No 38
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=93.76 E-value=0.12 Score=59.07 Aligned_cols=197 Identities=16% Similarity=0.120 Sum_probs=109.8
Q ss_pred HHHHHhCCChHHHHHHHHHHHHHHHHHhhCCCcccccCCchhhhhhhcc----ccccccchhhHHHHHHHHHHHHHhC--
Q 043003 177 AMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENL----VYVWAPYYTIHKIMAGLLDQYTLAN-- 250 (855)
Q Consensus 177 A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~~~~~~r~~~l----~~~w~pyy~~HkI~aGLld~Y~~TG-- 250 (855)
.++...|+|+++.++++.+.+.|.+.|. .+|-+..+-...-..|... ...-..||-. |+.+|.++|
T Consensus 183 ~~LS~lTGd~~Y~~~a~~~~~~l~~~~~--~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEY------LlK~~il~g~~ 254 (478)
T 1nxc_A 183 MHLSHLSGDPVFAEKVMKIRTVLNKLDK--PEGLYPNYLNPSSGQWGQHHVSVGGLGDSFYEY------LLKAWLMSDKT 254 (478)
T ss_dssp HHHHHHHCCTHHHHHHHHHHHHHHHSCC--GGGCCCSEECTTTCCBCSCEECSSTTTHHHHHH------HHHHHHHTTTC
T ss_pred HHHHHHHCChHHHHHHHHHHHHHHhcCC--CCCccccccCCCCCCccCceeeecCCCchHHHH------HHHHHHHcCCc
Confidence 3445679999999999999999988776 6676554321111112210 0111135432 568888998
Q ss_pred ChhHHHHHHHHHHHHHHHhhhhhh-c------cchhh--hc-ccccccccchHHHHHHHHHhcCCHHHHHHHHhcccccc
Q 043003 251 NGQALNITIWMADYFNTRVQNLIA-R------SSLER--HY-QTLNDESGGMNDVLYKLYGITKDPKHLKLAELFDKPCF 320 (855)
Q Consensus 251 ~~kaL~ia~r~AD~~~~r~~~~~~-~------~~~~~--~~-~~l~~E~GGmneaL~~LY~~TGd~ryL~LA~~F~~~~~ 320 (855)
+++.+++-.+..+-+.+.+-...+ + ..... ++ .-+.|-.|||--.-.++......++|+++|+.+.+.|+
T Consensus 255 d~~~~~m~~~a~~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~gG~~aLg~~~~~~~~~~~~l~~a~~l~~tC~ 334 (478)
T 1nxc_A 255 DLEAKKMYFDAVQAIETHLIRKSSGGLTYIAEWKGGLLEHKMGHLTCFAGGMFALGADGAPEARAQHYLELGAEIARTCH 334 (478)
T ss_dssp CHHHHHHHHHHHHHHHHHTEEECTTSCEEECEEETTEEECEEETGGGGHHHHHHHTSTTSCTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCcEEEEeccCCcccccccchhhhhHHHHHhccccccccchHHHHHHHHHHHHHHH
Confidence 467888888888888776521000 0 00000 11 12344456653211222222234789999988754331
Q ss_pred ---------ccccccccCCC---CCCc-c---cCcchH-hHHHHHHHHHhCChHHHHHHHHHHHHhcccCeEeecCCCC
Q 043003 321 ---------LGLLAVKADNI---AGLH-A---NTHIPL-VCGVQNRYELTGDEQSMAMGTFFMDIINSSHSYATGGTSH 382 (855)
Q Consensus 321 ---------~~~la~~~d~l---~g~H-a---nthiP~-~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~~~Y~TGG~g~ 382 (855)
+.|....-+.- .... . +---|- +...--+|++|||+.|++.+...++.+.+ +.-+-+|.++
T Consensus 335 ~~y~~~~tgl~PE~~~~~~~~~~~~~~~~~~~y~LRPE~iES~fylyR~TgD~~yre~gw~~f~ai~k-~~r~~~G~a~ 412 (478)
T 1nxc_A 335 ESYNRTYVKLGPEAFRFDGGVEAIATRQNEKYYILRPEVIETYMYMWRLTHDPKYRTWAWEAVEALES-HCRVNGGYSG 412 (478)
T ss_dssp HHHHTSSSSSCCSEEESSTTCSSBCCSGGGCCBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-HTEETTEECC
T ss_pred HHHHhcccCCCCeEEEeccCcccccccccccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-Hhhccccccc
Confidence 11211100000 0000 0 111122 46778889999999999999999999974 6666666654
No 39
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=93.67 E-value=0.35 Score=55.77 Aligned_cols=188 Identities=13% Similarity=0.073 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHhCCh------------hHHHHHHHHHHHHHHHhhhhhhccch--------hhhcc---cccccccchHH
Q 043003 238 IMAGLLDQYTLANNG------------QALNITIWMADYFNTRVQNLIARSSL--------ERHYQ---TLNDESGGMND 294 (855)
Q Consensus 238 I~aGLld~Y~~TG~~------------kaL~ia~r~AD~~~~r~~~~~~~~~~--------~~~~~---~l~~E~GGmne 294 (855)
++-||+.+|.++|++ .+|+.|+.+||.+..-|... .+.+. ...+. ..-.|.|.+..
T Consensus 105 ~LGGLLSAy~Ls~~~~~~~~~~~~~~~~lL~kA~dLadrLlpAFdTp-tgiP~~~vnl~~~~~~~~~~~~~~Ae~gsl~L 183 (503)
T 1hcu_A 105 YLGGLLSAYDLLRGPFSSLATNQTLVNSLLRQAQTLANGLKVAFTTP-SGVPDPTVFFNPTVRRSGASSNNVAEIGSLVL 183 (503)
T ss_dssp HHHHHHHHHHHHHTTTGGGCCCHHHHHHHHHHHHHHHHHHGGGGCSS-SSCCCSEEECSSSCEECCCSEEEHHHHTTSHH
T ss_pred hHhHHHHHHHHccCccccccccccchHHHHHHHHHHHHHHHHhhcCC-CCCCcceeecccCCCCCCCCccccccccceee
Confidence 568999999999994 89999999999998777421 11110 01111 11235566777
Q ss_pred HHHHHHHhcCCHHHHHHHHhcccc----c-----cccccccccCCCCCCcccCcchH-------hHHHHHHHHHhCCh--
Q 043003 295 VLYKLYGITKDPKHLKLAELFDKP----C-----FLGLLAVKADNIAGLHANTHIPL-------VCGVQNRYELTGDE-- 356 (855)
Q Consensus 295 aL~~LY~~TGd~ryL~LA~~F~~~----~-----~~~~la~~~d~l~g~HanthiP~-------~~G~a~~Y~~TGD~-- 356 (855)
=+.+|.++|||++|.+.|++..+. . ..+.+...-|...|...+.++-+ -.-+.+.|.++|+.
T Consensus 184 EF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~~~ 263 (503)
T 1hcu_A 184 EWTRLSDLTGNPQYAQLAQKGESYLLNPKGSPEAWPGLIGTFVSTSNGTFQDSSGSWSGLMDSFYEYLIKMYLYDPVAFA 263 (503)
T ss_dssp HHHHHHHHHSCTHHHHHHHHHHHHHHSCCBSCCSBTTBCCSEEETTTCCBCCCEECSSTTTHHHHHHHHHHHHHCTTTTH
T ss_pred ehHHHHHHhCChHHHHHHHHHHHHHHhhhcccCCCCCceeeEEeCCCCcccCCeeeecCCCccHHHHHHHHHHHcCCchH
Confidence 889999999999999999886431 0 00000000111111111111111 13467788999875
Q ss_pred HHHHHHHHHHHHhcccCeEeecCCCCCCCCCCC---ccccccCCcCccccchhhHHHHHHHHHHccCCcchHHHHHHHHH
Q 043003 357 QSMAMGTFFMDIINSSHSYATGGTSHQEFWTDP---KRIATALSAETEESCTTYNMLKVSRYLFKWTKQVTYADYYERAL 433 (855)
Q Consensus 357 ~y~~aa~~fwd~V~~~~~Y~TGG~g~~E~f~~~---~~l~~~l~~~~~ETCat~nmlkl~~~Lf~~tgd~~YaD~~ERaL 433 (855)
.|++.-....+.|.+ |+.-.-....+=.|... ..+. .....=+|=.-+|+-|.-.++. ..+|++..++..
T Consensus 264 ~y~~m~~~a~~~i~~-~l~~~~~~~~~~~~v~~~~~~~~~---~~~~hL~cF~~G~~aLgg~~~~---~~~~~~~a~~L~ 336 (503)
T 1hcu_A 264 HYKDRWVLGADSTIG-HLGSHPSTRKDLTFLSSYNGQSTS---PNSGHLASFGGGNFILGGILLN---EQKYIDFGIKLA 336 (503)
T ss_dssp HHHHHHHHHHHHHHH-HTEECBTTCTTCCEECEEETTEEE---SEEEGGGGGHHHHHHHHHHHHT---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HhccCCCCCCCceEEEeccCCccc---cccchhhhhhhHHHHhcCcccc---cHHHHHHHHHHH
Confidence 566554444444432 22211000000011110 0111 1344568999999999987764 456777766543
No 40
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=93.10 E-value=0.7 Score=52.88 Aligned_cols=188 Identities=12% Similarity=0.107 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHh-CC-----------hhHHHHHHHHHHHHHHHhhhhhhccch-------hhhcc---cccccccchHHH
Q 043003 238 IMAGLLDQYTLA-NN-----------GQALNITIWMADYFNTRVQNLIARSSL-------ERHYQ---TLNDESGGMNDV 295 (855)
Q Consensus 238 I~aGLld~Y~~T-G~-----------~kaL~ia~r~AD~~~~r~~~~~~~~~~-------~~~~~---~l~~E~GGmnea 295 (855)
++-||+.+|.++ |+ +.+|+.|+.+||.+..-|... .+.+. ...+. ..-.|.|.+..=
T Consensus 92 ~LGGLLSAy~Ls~g~~~~~~~~~~~~~~lL~kA~dLadrLlpAF~Tp-tgiP~~~vnl~~~~~~~~~~~~~Ae~gsl~LE 170 (475)
T 2ri9_A 92 YLAGMLSGYDLLQGPAKNLVDNQDLIDGLLDQSRNLADVLKFAFDTP-SGVPYNNINITSHGNDGATTNGLAVTGTLVLE 170 (475)
T ss_dssp HHHHHHHHHHHHHTTTTTSCCCHHHHHHHHHHHHHHHHHHGGGGCSS-SSCCCSEECTTTCCBCCCSEEEHHHHHSCHHH
T ss_pred hHhHHhHHHHhccCccccccccccchHHHHHHHHHHHHHHHHhhcCC-CCCCCceeecccCCCcCCCccchhccccceee
Confidence 567999999999 87 689999999999998776421 11110 01111 111255667777
Q ss_pred HHHHHHhcCCHHHHHHHHhcccc----c------cccccccccCCCCCCcccCcchH-------hHHHHHHHHHhCCh--
Q 043003 296 LYKLYGITKDPKHLKLAELFDKP----C------FLGLLAVKADNIAGLHANTHIPL-------VCGVQNRYELTGDE-- 356 (855)
Q Consensus 296 L~~LY~~TGd~ryL~LA~~F~~~----~------~~~~la~~~d~l~g~HanthiP~-------~~G~a~~Y~~TGD~-- 356 (855)
+.+|.++|||++|.+.|++..+. . ..+.+...-|...|...+.++-+ -.-+.+.|.++|+.
T Consensus 171 F~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~~~ 250 (475)
T 2ri9_A 171 WTRLSDLTGDEEYAKLSQKAESYLLKPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGDDSFYEYLIKMYVYDPKRFE 250 (475)
T ss_dssp HHHHHHHHSCTHHHHHHHHHHHHHHSCSSGGGCSBTTBCCSEEETTTCCBCCCCBCSSTTTHHHHHHHHHHHHHCTTTTH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHhhccccccCCCCCcceEEeCCCCcccCCceeecCCcchHHHHHHHHHHHcCCchH
Confidence 88999999999999999876431 0 00000000111111111111111 13467788999875
Q ss_pred HHHHHHHHHHHHhcccCeEeecCCCCCCCCCCC---ccccccCCcCccccchhhHHHHHHHHHHccCCcchHHHHHHHHH
Q 043003 357 QSMAMGTFFMDIINSSHSYATGGTSHQEFWTDP---KRIATALSAETEESCTTYNMLKVSRYLFKWTKQVTYADYYERAL 433 (855)
Q Consensus 357 ~y~~aa~~fwd~V~~~~~Y~TGG~g~~E~f~~~---~~l~~~l~~~~~ETCat~nmlkl~~~Lf~~tgd~~YaD~~ERaL 433 (855)
.|++.-....+.|.+ |+.-.--...+=.|... ..+. .....=+|=.-+|+-|.-+++. ..+|.+..++..
T Consensus 251 ~~~~m~~~a~~~i~~-~l~~~~~~~~~~~~v~~~~~~~~~---~~~~hL~cF~~G~~aLgg~~~~---~~~~~~~a~~l~ 323 (475)
T 2ri9_A 251 TYKDRWVLAAESTIK-HLKSHPKSRPDLTFLSSYSNRNYD---LSSQHLTCFDGGSFLLGGTVLD---RQDFIDFGLELV 323 (475)
T ss_dssp HHHHHHHHHHHHHHH-HTEECCSSCTTCCEECEEETTEEE---CEEETGGGGHHHHHHHHHHHHT---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HhccCCCCCCCceEEEeccCCccc---cccchHHHhHHHHHHhcccccc---cHHHHHHHHHHH
Confidence 566554444444432 22211000000011110 0111 1334568999999999988764 456777766543
No 41
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=92.15 E-value=0.7 Score=53.59 Aligned_cols=194 Identities=19% Similarity=0.166 Sum_probs=106.8
Q ss_pred HHHHhCCChHHHHHHHHHHHHHHHHH-hhCCCcccccCCchhhhhhhcc-----ccccccchhhHHHHHHHHHHHHHhC-
Q 043003 178 MAWASTRNETVKQKMDAVMSVLSECQ-KKIGTGYLSAFPSEFFDRLENL-----VYVWAPYYTIHKIMAGLLDQYTLAN- 250 (855)
Q Consensus 178 ~~~a~t~D~~L~~k~d~~Vd~L~~~Q-~~~~DGYL~a~~~~~~~r~~~l-----~~~w~pyy~~HkI~aGLld~Y~~TG- 250 (855)
++...|+|+.+.++++.+.+.|.+.| . .+|-+..+-...-..|... -..-..||-. |+.+|.++|
T Consensus 246 ~LS~LTGd~~Y~~~a~r~~~~l~~~~~~--~~GL~p~~i~~~tG~~~~~~~~~lGa~~DS~YEY------LlK~~il~g~ 317 (538)
T 1x9d_A 246 ELSRLTGDKKFQEAVEKVTQHIHGLSGK--KDGLVPMFINTHSGLFTHLGVFTLGARADSYYEY------LLKQWIQGGK 317 (538)
T ss_dssp HHHHHHCCTHHHHHHHHHHHHHHTCSCC--BTTBCCSEEETTTCCEESTTEECSSTTTHHHHHH------HHHHHHHTTS
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHhcccC--CCCCcceEEeCCCCCccCCcceeecCCccHHHHH------HHHHHHHcCC
Confidence 34457999999999999999999887 4 5665554321101112111 0111135432 668899999
Q ss_pred -ChhHHHHHHHHHHHHHHHhhhhh--hc------cchhh--hc-ccccccccchHHHHHHHHHhcCCHHHHHHHHhcccc
Q 043003 251 -NGQALNITIWMADYFNTRVQNLI--AR------SSLER--HY-QTLNDESGGMNDVLYKLYGITKDPKHLKLAELFDKP 318 (855)
Q Consensus 251 -~~kaL~ia~r~AD~~~~r~~~~~--~~------~~~~~--~~-~~l~~E~GGmneaL~~LY~~TGd~ryL~LA~~F~~~ 318 (855)
+++++++-....+-+.+.+-... .+ ..... ++ .-+.|-.|||- +|. -.+-.+++|+++|+.+.+.
T Consensus 318 ~d~~y~~my~~a~~~i~~~L~~~~~~~~~~~v~~~~~g~~~~~~~hL~cF~gG~~-aLg--g~~~~~~~~l~~a~~L~~t 394 (538)
T 1x9d_A 318 QETQLLEDYVEAIEGVRTHLLRHSEPSKLTFVGELAHGRFSAKMDHLVCFLPGTL-ALG--VYHGLPASHMELAQELMET 394 (538)
T ss_dssp CCHHHHHHHHHHHHHHHHHTEEECTTTCCEEECEEETTEEECEEEGGGGHHHHHH-HHH--HHTTCCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHhccCCCCCCceEEEeccCCccCcccchHhhhhhhHH-Hhc--CcccCcHHHHHHHHHHHHH
Confidence 67888888888877776652100 00 00000 01 12344456652 221 2234578899999877542
Q ss_pred cc---------ccccccccCC--------CCCCcccCc---chH-hHHHHHHHHHhCChHHHHHHHHHHHHhcccCeEee
Q 043003 319 CF---------LGLLAVKADN--------IAGLHANTH---IPL-VCGVQNRYELTGDEQSMAMGTFFMDIINSSHSYAT 377 (855)
Q Consensus 319 ~~---------~~~la~~~d~--------l~g~Hanth---iP~-~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~~~Y~T 377 (855)
|+ +.|....-+. ..-.....+ -|- +...--+|++|||+.|++.+...++.+.++=-...
T Consensus 395 C~~~Y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~d~~y~LRPE~IES~fylyR~TgD~~yre~gw~~f~ai~k~~rt~~ 474 (538)
T 1x9d_A 395 CYQMNRQMETGLSPEIVHFNLYPQPGRRDVEVKPADRHNLLRPETVESLFYLYRVTGDRKYQDWGWEILQSFSRFTRVPS 474 (538)
T ss_dssp HHHHHHTSTTSCCCSEEECCSSCCTTCCSCBCCGGGCCBCCCCHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHTBCTT
T ss_pred HHHHHHhcccCCCceEEEeccCCCccccceeeeccCcccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccccc
Confidence 21 1121110000 000001111 122 46778899999999999999999999875333333
Q ss_pred cCCCC
Q 043003 378 GGTSH 382 (855)
Q Consensus 378 GG~g~ 382 (855)
||.++
T Consensus 475 Ggya~ 479 (538)
T 1x9d_A 475 GGYSS 479 (538)
T ss_dssp SCBCC
T ss_pred CCccc
Confidence 43654
No 42
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=91.03 E-value=0.91 Score=52.39 Aligned_cols=194 Identities=14% Similarity=0.096 Sum_probs=106.6
Q ss_pred HHHHhCCChHHHHHHHHHHHHHHHHHhh--CCCcccccCCchhhhhhhc----cccccccchhhHHHHHHHHHHHHHhCC
Q 043003 178 MAWASTRNETVKQKMDAVMSVLSECQKK--IGTGYLSAFPSEFFDRLEN----LVYVWAPYYTIHKIMAGLLDQYTLANN 251 (855)
Q Consensus 178 ~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~--~~DGYL~a~~~~~~~r~~~----l~~~w~pyy~~HkI~aGLld~Y~~TG~ 251 (855)
++...|+|+.+.++++.+.+.|.+.|.. ..+|-+..+-...-..|.. +-..-..||-. |+.+|.++++
T Consensus 184 ~LS~LTGd~~Y~~~a~r~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~lGa~~DS~YEY------LlK~~il~~d 257 (511)
T 1dl2_A 184 YLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSRGDSFYEY------LLKQYLLTHE 257 (511)
T ss_dssp HHHHHHTCHHHHHHHHTTHHHHHHHHTHHHHHTTCCBSEECTTTCCBCSCCBCSSTTTHHHHHH------HHHHHHHHCC
T ss_pred HHHHHHCChHHHHHHHHHHHHHHhcccccCCCCCCcceEEcCCCCCccCCeeeecCCCCcHHHH------HHHHHHhcCC
Confidence 3445699999999999999999998821 1566555432111111211 00111135432 5678888899
Q ss_pred hhHHHHHHHHHHHHHHHhhhhh--------hccc---hh--hhc-ccccccccchHHHHHHHHHh---------cCCHHH
Q 043003 252 GQALNITIWMADYFNTRVQNLI--------ARSS---LE--RHY-QTLNDESGGMNDVLYKLYGI---------TKDPKH 308 (855)
Q Consensus 252 ~kaL~ia~r~AD~~~~r~~~~~--------~~~~---~~--~~~-~~l~~E~GGmneaL~~LY~~---------TGd~ry 308 (855)
++.+++-....+=+.+.+-... .... .. .++ .-+.|-.||| .+|.-...+ ..+++|
T Consensus 258 ~~y~~m~~~a~~~i~~~L~~~~~~~~~~~~~~~~~~~~g~~~~~~~hL~cF~gG~-~aLg~~~~~~~~~a~~~~~~~~~~ 336 (511)
T 1dl2_A 258 TLYYDLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHGQLSPKMDHLVCFMGGL-LASGSTEGLSIHEARRRPFFSKSD 336 (511)
T ss_dssp HHHHHHHHHHHHHHHHHTEEECTTTCCEEECBBTTCTTSCCBCEEEGGGGGHHHH-HHHHHHTTCCHHHHTTSTTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCcEEEEEeecCCCCccccccchhhhchhHH-HHhccccCCChhhhhhcccccHHH
Confidence 9999998888888777653110 0000 00 000 1233445565 233211111 224589
Q ss_pred HHHHHhcccccc---------ccccccccCCC------------CC--Cc-c---cCcch-HhHHHHHHHHHhCChHHHH
Q 043003 309 LKLAELFDKPCF---------LGLLAVKADNI------------AG--LH-A---NTHIP-LVCGVQNRYELTGDEQSMA 360 (855)
Q Consensus 309 L~LA~~F~~~~~---------~~~la~~~d~l------------~g--~H-a---nthiP-~~~G~a~~Y~~TGD~~y~~ 360 (855)
+++|+.+.+.|+ +.|....-+.- .. .+ . +-.-| .|...--+|++|||+.|++
T Consensus 337 ~~~a~~l~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~d~~~~~~d~~y~LRPE~iES~fylyR~TgD~~yre 416 (511)
T 1dl2_A 337 WDLAKGITDTCYQMYKQSSSGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKYRE 416 (511)
T ss_dssp HHHHHHHHHHHHHHHHTSTTSCCCSEEEECCSCCC-CCCEECSSSSEEECGGGCCBCCCCHHHHHHHHHHHHHCCTHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccCCCceEEEeecCCccccccccccccceeeccCCcccCcCHHHHHHHHHHHHHcCCHHHHH
Confidence 999988754322 11211100000 00 00 0 11122 2467788999999999999
Q ss_pred HHHHHHHHhcccCeEeecC
Q 043003 361 MGTFFMDIINSSHSYATGG 379 (855)
Q Consensus 361 aa~~fwd~V~~~~~Y~TGG 379 (855)
.+...++.+.+ +.-+-.|
T Consensus 417 ~gw~~f~ai~k-~~rt~~G 434 (511)
T 1dl2_A 417 WGAEIATSFFE-NTCVDCN 434 (511)
T ss_dssp HHHHHHHHHHH-HHEESTT
T ss_pred HHHHHHHHHHH-HhccccC
Confidence 99999999874 5555545
No 43
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=90.84 E-value=0.9 Score=51.98 Aligned_cols=195 Identities=15% Similarity=0.019 Sum_probs=107.0
Q ss_pred HHHHhCCChHHHHHHHHHHHHHHHHH--h-hCCCcccccCCchhhhhhhccc----cccccchhhHHHHHHHHHHHHHhC
Q 043003 178 MAWASTRNETVKQKMDAVMSVLSECQ--K-KIGTGYLSAFPSEFFDRLENLV----YVWAPYYTIHKIMAGLLDQYTLAN 250 (855)
Q Consensus 178 ~~~a~t~D~~L~~k~d~~Vd~L~~~Q--~-~~~DGYL~a~~~~~~~r~~~l~----~~w~pyy~~HkI~aGLld~Y~~TG 250 (855)
++...|+|+++.++++.+.+.|.+.| . ...+|-++.+-...-..|.... ..-..||=. |+.+|.++|
T Consensus 173 ~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEY------LlK~~il~g 246 (475)
T 2ri9_A 173 RLSDLTGDEEYAKLSQKAESYLLKPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGDDSFYEY------LIKMYVYDP 246 (475)
T ss_dssp HHHHHHSCTHHHHHHHHHHHHHHSCSSGGGCSBTTBCCSEEETTTCCBCCCCBCSSTTTHHHHHH------HHHHHHHCT
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHhhccccccCCCCCcceEEeCCCCcccCCceeecCCcchHHHH------HHHHHHHcC
Confidence 34457999999999999999999877 1 0134544443211111121110 111135432 678999999
Q ss_pred Ch--hHHHHHHHHHHHHHHHhhhhh---hcc------chh--hhc-ccccccccchHHHHHHHHHhcCCHHHHHHHHhcc
Q 043003 251 NG--QALNITIWMADYFNTRVQNLI---ARS------SLE--RHY-QTLNDESGGMNDVLYKLYGITKDPKHLKLAELFD 316 (855)
Q Consensus 251 ~~--kaL~ia~r~AD~~~~r~~~~~---~~~------~~~--~~~-~~l~~E~GGmneaL~~LY~~TGd~ryL~LA~~F~ 316 (855)
+. +.+++-.+..+=+.+.+.... .++ ... .++ .-+.|-.|||- +|. -++-++++|+++|+.+.
T Consensus 247 ~~~~~~~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~-aLg--g~~~~~~~~~~~a~~l~ 323 (475)
T 2ri9_A 247 KRFETYKDRWVLAAESTIKHLKSHPKSRPDLTFLSSYSNRNYDLSSQHLTCFDGGSF-LLG--GTVLDRQDFIDFGLELV 323 (475)
T ss_dssp TTTHHHHHHHHHHHHHHHHHTEECCSSCTTCCEECEEETTEEECEEETGGGGHHHHH-HHH--HHHHTCHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchHHHhHHHHH-Hhc--ccccccHHHHHHHHHHH
Confidence 86 678877777777766543110 000 000 001 12345556663 232 12345789999998875
Q ss_pred cccc---------ccccccccCC---C---------CCCc-c---cCcchH-hHHHHHHHHHhCChHHHHHHHHHHHHhc
Q 043003 317 KPCF---------LGLLAVKADN---I---------AGLH-A---NTHIPL-VCGVQNRYELTGDEQSMAMGTFFMDIIN 370 (855)
Q Consensus 317 ~~~~---------~~~la~~~d~---l---------~g~H-a---nthiP~-~~G~a~~Y~~TGD~~y~~aa~~fwd~V~ 370 (855)
+.|+ +.|....-+. . .+.. . +-.-|- |...--+|++|||+.|++.+...++.+.
T Consensus 324 ~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~LRPE~iES~fylyR~TgD~~yr~~gw~~f~ai~ 403 (475)
T 2ri9_A 324 DGCEATYNSTLTKIGPDSWGWDPKKVPSDQKEFYEKAGFYISSGSYVLRPEVIESFYYAHRVTGKEIYRDWVWNAFVAIN 403 (475)
T ss_dssp HHHHHHHHTSSSSCCCSEEECCTTCCCGGGHHHHHHHSCEEEECCBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCcEEEeecCcccccccccccCCCceecccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 4331 1121110000 0 0110 0 111222 3677788999999999999999999986
Q ss_pred ccCeEeecCCCC
Q 043003 371 SSHSYATGGTSH 382 (855)
Q Consensus 371 ~~~~Y~TGG~g~ 382 (855)
+ +.-+-.|.++
T Consensus 404 k-~~rt~~G~a~ 414 (475)
T 2ri9_A 404 S-TCRTDSGFAA 414 (475)
T ss_dssp H-HTBCSSSBCC
T ss_pred H-HHccccCCcc
Confidence 4 5555556554
No 44
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=90.58 E-value=1.2 Score=51.81 Aligned_cols=125 Identities=10% Similarity=-0.004 Sum_probs=73.1
Q ss_pred hHHHHHHHHHHHHHHHHHhhCCCcccccCCchhhhhh-------hc---cccccccc-hhhHHHHHHHHHHHHHhCC---
Q 043003 186 ETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRL-------EN---LVYVWAPY-YTIHKIMAGLLDQYTLANN--- 251 (855)
Q Consensus 186 ~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~~~~~~r~-------~~---l~~~w~py-y~~HkI~aGLld~Y~~TG~--- 251 (855)
+.+++.+..-+|.|.+||.. .+|.+-. +-....| +. -|.++..= ..--.+-|+|..++++.++
T Consensus 188 ~d~ldeikwg~D~llk~~~~-~~g~~y~--~v~~~~w~g~~~~Pe~~~~~R~~~~~~t~~~~~~AAalA~as~vf~~~D~ 264 (537)
T 3gzk_A 188 PPALEVAREEIAWLLTMQDP-ATGGVYH--KVTTPSFPPLDTRPEDDDAPLVLSPISYAATATFCAAMAHAALVYRPFDP 264 (537)
T ss_dssp CHHHHHHHHHHHHHHHTBCT-TTCCBBS--EEECSSCCCTTCCGGGCCSCEEECCBCHHHHHHHHHHHHHHHHHHTTTCH
T ss_pred HHHHHHHHHHHHHHHhcccC-CCCeEEE--EecCCCcCCCCcCcccCCCcceEeecCCcHHHHHHHHHHHHHHhhcccCH
Confidence 57899999999999999972 1233321 0000112 11 11111110 0112345777788888888
Q ss_pred ---hhHHHHHHHHHHHHHHHhhhhhhccchhhhcc-----cccccccchHHHHHHHHHhcCCHHHHHHHHhccc
Q 043003 252 ---GQALNITIWMADYFNTRVQNLIARSSLERHYQ-----TLNDESGGMNDVLYKLYGITKDPKHLKLAELFDK 317 (855)
Q Consensus 252 ---~kaL~ia~r~AD~~~~r~~~~~~~~~~~~~~~-----~l~~E~GGmneaL~~LY~~TGd~ryL~LA~~F~~ 317 (855)
++.|+.|+++.+|+.+........ +...... ....| +.-+.+|||+.|||++||+.|+.+..
T Consensus 265 ~yA~~~L~~A~~~~~fa~~~~~~~~~~-~~~~~~~~Y~~~~~~De---l~wAA~~Ly~aTgd~~Yl~~a~~~~~ 334 (537)
T 3gzk_A 265 ALSSCCADAARRAYAWLGAHEMQPFHN-PDGILTGEYGDAELRDE---LLWASCALLRMTGDSAWARVCEPLLD 334 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCCCCC-CTTCCSCCCCCSCCHHH---HHHHHHHHHHHHCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccC-CcccccCCcCCCccchH---HHHHHHHHHHHhCCHHHHHHHHHhhh
Confidence 899999999999998653321100 0000000 01112 45588999999999999999987654
No 45
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=89.03 E-value=6.3 Score=43.40 Aligned_cols=184 Identities=11% Similarity=-0.113 Sum_probs=94.3
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhCCC---cccccCCc---hh-hhhhhc--cccccccchhhHHHHHHHH
Q 043003 173 LSATAMAWASTRNETVKQKMDAVMSVLSECQKKIGT---GYLSAFPS---EF-FDRLEN--LVYVWAPYYTIHKIMAGLL 243 (855)
Q Consensus 173 LsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~D---GYL~a~~~---~~-~~r~~~--l~~~w~pyy~~HkI~aGLl 243 (855)
+.++..++....|+...+.+..+++.|.+.++ .+. +|...... +. ...+.. ..-.++-=.+| |...|.
T Consensus 140 ~aGi~~~Ll~l~~~~~~~~~~~~~~~l~~~~~-~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aG--i~~~L~ 216 (409)
T 2g0d_A 140 LSGILSYLLLINDEQYDDLKILIINFLSNLTK-ENNGLISLYIKSENQMSQSESEMYPLGCLNMGLAHGLAG--VGCILA 216 (409)
T ss_dssp HHHHHHHHTTCCCGGGHHHHHHHHHHHHHTTS-CCSSSCTTCBCGGGSSSHHHHHHCTTCBEECCTTTSHHH--HHHHHH
T ss_pred HHHHHHHHHHccCchhHHHHHHHHHHHHHHHh-cCCCCCceeecCCccccchhhhcCCCCCccCCchhhHHH--HHHHHH
Confidence 55555555555577788888888998888654 122 22221100 00 001110 00011100112 334344
Q ss_pred HHHHHhC--ChhHHHHHHHHHHHHHHHhhh-hhhc-cch-----hh--------hc-cccccccc--chHHHHHHHHHhc
Q 043003 244 DQYTLAN--NGQALNITIWMADYFNTRVQN-LIAR-SSL-----ER--------HY-QTLNDESG--GMNDVLYKLYGIT 303 (855)
Q Consensus 244 d~Y~~TG--~~kaL~ia~r~AD~~~~r~~~-~~~~-~~~-----~~--------~~-~~l~~E~G--GmneaL~~LY~~T 303 (855)
.+| .+| +++.++.+.+.++|+.+.... .-.. ++. +. .. ...+=-+| |+..++..+|+.+
T Consensus 217 ~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~wp~g~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~ 295 (409)
T 2g0d_A 217 YAH-IKGYSNEASLSALQKIIFIYEKFELERKKQFLWKDGLVADELKKEKVIREASFIRDAWCYGGPGISLLYLYGGLAL 295 (409)
T ss_dssp HHH-HHTCCCHHHHHHHHHHHHHHHHHCCCGGGTTCCCSEECHHHHHHTSCCSCCSCCCCCSSSSHHHHHHHHHHHHHHT
T ss_pred HHH-HhCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCCCccccHhhhcccccccCCCCCCcCCCCCHHHHHHHHHHHHHc
Confidence 445 455 889999999999999764321 0000 100 00 00 00000134 7889999999999
Q ss_pred CCHHHHHHHHhccccccccccccccCCCCCCcccCcchHhHHHHHHHHHhCChHHHHHHHH
Q 043003 304 KDPKHLKLAELFDKPCFLGLLAVKADNIAGLHANTHIPLVCGVQNRYELTGDEQSMAMGTF 364 (855)
Q Consensus 304 Gd~ryL~LA~~F~~~~~~~~la~~~d~l~g~HanthiP~~~G~a~~Y~~TGD~~y~~aa~~ 364 (855)
+|++|++.|+...+..+-.. .......-.|=.. =++.-+.++|+.|+|++|++.+..
T Consensus 296 ~d~~~~~~a~~~~~~~~~~~--~~~~~~~LCHG~a--G~~~~l~~l~~~~~~~~~~~~a~~ 352 (409)
T 2g0d_A 296 DNDYFVDKAEKILESAMQRK--LGIDSYMICHGYS--GLIEICSLFKRLLNTKKFDSYMEE 352 (409)
T ss_dssp TCHHHHHHHHHHHHHHHHHC--TTCCSCCTTTSHH--HHHHHHHHHHHHHCCCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhc--cCCCCCCCCChHH--HHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999999987654221000 0000001112100 001224567899999999887776
No 46
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=88.68 E-value=1.4 Score=50.69 Aligned_cols=195 Identities=15% Similarity=0.082 Sum_probs=107.4
Q ss_pred HHHHhCCChHHHHHHHHHHHHHHHHHh--hCCCcccccCCchhhhhhhccc----cccccchhhHHHHHHHHHHHHHhCC
Q 043003 178 MAWASTRNETVKQKMDAVMSVLSECQK--KIGTGYLSAFPSEFFDRLENLV----YVWAPYYTIHKIMAGLLDQYTLANN 251 (855)
Q Consensus 178 ~~~a~t~D~~L~~k~d~~Vd~L~~~Q~--~~~DGYL~a~~~~~~~r~~~l~----~~w~pyy~~HkI~aGLld~Y~~TG~ 251 (855)
++...|+|+.+.++++.+.+.|.+.|. ...+|-++.+-...-..|.... ..-..||=. |+.+|.++|+
T Consensus 187 ~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEY------LlK~~il~g~ 260 (503)
T 1hcu_A 187 RLSDLTGNPQYAQLAQKGESYLLNPKGSPEAWPGLIGTFVSTSNGTFQDSSGSWSGLMDSFYEY------LIKMYLYDPV 260 (503)
T ss_dssp HHHHHHSCTHHHHHHHHHHHHHHSCCBSCCSBTTBCCSEEETTTCCBCCCEECSSTTTHHHHHH------HHHHHHHCTT
T ss_pred HHHHHhCChHHHHHHHHHHHHHHhhhcccCCCCCceeeEEeCCCCcccCCeeeecCCCccHHHH------HHHHHHHcCC
Confidence 344679999999999999999998763 1135544433211011121100 111135432 6789999998
Q ss_pred h--hHHHHHHHHHHHHHHHhhhhh---hcc------chh--hhc-ccccccccchHHHHHHHHHhcCCHHHHHHHHhccc
Q 043003 252 G--QALNITIWMADYFNTRVQNLI---ARS------SLE--RHY-QTLNDESGGMNDVLYKLYGITKDPKHLKLAELFDK 317 (855)
Q Consensus 252 ~--kaL~ia~r~AD~~~~r~~~~~---~~~------~~~--~~~-~~l~~E~GGmneaL~~LY~~TGd~ryL~LA~~F~~ 317 (855)
. +.+++-.+..+=+.+.+.... .++ ... .++ .-+.|-.|||- +|. -.+-++++|+++|+.+.+
T Consensus 261 ~~~~y~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~-aLg--g~~~~~~~~~~~a~~L~~ 337 (503)
T 1hcu_A 261 AFAHYKDRWVLGADSTIGHLGSHPSTRKDLTFLSSYNGQSTSPNSGHLASFGGGNF-ILG--GILLNEQKYIDFGIKLAS 337 (503)
T ss_dssp TTHHHHHHHHHHHHHHHHHTEECBTTCTTCCEECEEETTEEESEEEGGGGGHHHHH-HHH--HHHHTCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchhhhhhhHHH-Hhc--CcccccHHHHHHHHHHHH
Confidence 6 678887777777766543110 000 000 011 12345556663 232 123457899999988754
Q ss_pred ccc---------ccccccccCC---------C---------CCCc-c---cCcchH-hHHHHHHHHHhCChHHHHHHHHH
Q 043003 318 PCF---------LGLLAVKADN---------I---------AGLH-A---NTHIPL-VCGVQNRYELTGDEQSMAMGTFF 365 (855)
Q Consensus 318 ~~~---------~~~la~~~d~---------l---------~g~H-a---nthiP~-~~G~a~~Y~~TGD~~y~~aa~~f 365 (855)
.|+ +.|....-+. . .+.. . +-.-|- |...--+|++|||+.|++.+...
T Consensus 338 tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~LRPE~iES~fylyR~TgD~~yre~gw~i 417 (503)
T 1hcu_A 338 SYFGTYTQTASGIGPEGFAWVDSVTGAGGSPPSSQSGFYSSAGFWVTAPYYILRPETLESLYYAYRVTGDSKWQDLAWEA 417 (503)
T ss_dssp HHHHHHHTSSSSCCCSEEECCBTTTCCSCCCCGGGHHHHHHHSCEEEECCBCCCCHHHHHHHHHHHHHCBHHHHHHHHHH
T ss_pred HHHHHHHhCccCCCceEEEeecCccccccCCcccccccccCCCceeccccccCChHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 331 1121110000 0 0110 0 111122 36777889999999999999999
Q ss_pred HHHhcccCeEeecCCCC
Q 043003 366 MDIINSSHSYATGGTSH 382 (855)
Q Consensus 366 wd~V~~~~~Y~TGG~g~ 382 (855)
++.+. ++.-+-.|.++
T Consensus 418 f~ai~-k~~r~~~Gya~ 433 (503)
T 1hcu_A 418 LSAIE-DACRAGSAYSS 433 (503)
T ss_dssp HHHHH-HHHEETTEECC
T ss_pred HHHHH-HHHhhccCCcc
Confidence 99986 46656666554
No 47
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=86.07 E-value=1.8 Score=51.40 Aligned_cols=201 Identities=10% Similarity=0.056 Sum_probs=100.1
Q ss_pred EecCCCccHHHHHHHHhhhhccccc-hh-----hHhHHHhcCCCCCC------------CCCCCcccCCccc--ccchhh
Q 043003 111 RLLPNSMHWRAQQTNLEYLVMLDVD-RL-----VWSFRKTAGLPTPG------------APYGGWEDQKMEL--RGHFLG 170 (855)
Q Consensus 111 rL~~~~~~~~~~~~~~~yll~ld~d-rL-----L~nFR~~AGl~~~g------------~~~gGWe~~dsdl--rGH~~G 170 (855)
+|.+ ..+.+.++.-+.|.-..-.. .| ...+|..+++...+ .-.|||...+ |. .|--.+
T Consensus 123 ~I~~-~~Y~~al~~sl~ff~~QRsG~~lp~~~~~~~Wr~~s~h~D~~~~~~~~~~~~~vDl~GGwyDAG-D~~Kf~~p~a 200 (639)
T 1clc_A 123 KIAM-NVYEDAFKTAMLGMYLLRCGTSVSATYNGIHYSHGPCHTNDAYLDYINGQHTKKDSTKGWHDAG-DYNKYVVNAG 200 (639)
T ss_dssp EECT-TTTHHHHHHHHHHHHHTBCSSCEEEEETTEEEEECCCCTTCCBCTTTTSCCCBCCCCCSBCCSS-SCCEEHHHHH
T ss_pred eech-hhhhHHHHHHHHHHHHhcCCCcCccccccCccCCCccccCCccccccCCCCccccCCCcceeCC-CCCEeCccHH
Confidence 5543 35677777666665432111 21 22266676664321 1358896553 32 011123
Q ss_pred HHHHHHHHHHHhC----------------CChHHHHHHHHHHHHHHHHHhhCCCccccc-CCchhhhhh---h---cccc
Q 043003 171 HYLSATAMAWAST----------------RNETVKQKMDAVMSVLSECQKKIGTGYLSA-FPSEFFDRL---E---NLVY 227 (855)
Q Consensus 171 h~LsA~A~~~a~t----------------~D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a-~~~~~~~r~---~---~l~~ 227 (855)
.-+..+++.|..- +-+.+++.+..-.|.|.+||...++|.+-. .....++-+ + .-|.
T Consensus 201 ~t~~~L~w~~~~~~~~~~~~~~~ipes~~~~~d~ldeikwg~Dyllk~q~~~~~g~~y~~vgd~~~~~~~~Pe~~~~~R~ 280 (639)
T 1clc_A 201 ITVGSMFLAWEHFKDQLEPVALEIPEKNNSIPDFLDELKYEIDWILTMQYPDGSGRVAHKVSTRNFGGFIMPENEHDERF 280 (639)
T ss_dssp HHHHHHHHHHHHSHHHHTTCCCSSGGGGSSSCHHHHHHHHHHHHHHTTBCTTSSCCBEEEEECSSCCCSCCGGGCCSCCE
T ss_pred HHHHHHHHHHHHhhhhhhccccCCccCCCcHHHHHHHHHHHHHHHHHhccccCCCeEEEEecCCCCCCCCCchhcCCCce
Confidence 3344444444432 126789999999999999997322043321 100000000 0 0111
Q ss_pred ccccch-hhHHHHHHHHHHHHHhCC------hhHHHHHHHHHHHHHHHhhhhhhccchh-hhccccccccc---chHHHH
Q 043003 228 VWAPYY-TIHKIMAGLLDQYTLANN------GQALNITIWMADYFNTRVQNLIARSSLE-RHYQTLNDESG---GMNDVL 296 (855)
Q Consensus 228 ~w~pyy-~~HkI~aGLld~Y~~TG~------~kaL~ia~r~AD~~~~r~~~~~~~~~~~-~~~~~l~~E~G---GmneaL 296 (855)
.+.+=- .--..-|+|.+++++-.+ ++.|+.|+++-+|..+.-... ++.. ......=++.+ -+.-+-
T Consensus 281 ~~~~~s~~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~---y~~~~~~~~g~Y~ss~~~DEl~WAA 357 (639)
T 1clc_A 281 FVPWSSAATADFVAMTAMAARIFRPYDPQYAEKCINAAKVSYEFLKNNPANV---FANQSGFSTGEYATVSDADDRLWAA 357 (639)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHCCSCC---CCCCTTCCSCCCCCSCSHHHHHHHH
T ss_pred EecCCcHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCc---cCCCccccccccCCCCcchHHHHHH
Confidence 111100 001133556666666543 478999999999987643211 1100 00000000111 034477
Q ss_pred HHHHHhcCCHHHHHHHHhcc
Q 043003 297 YKLYGITKDPKHLKLAELFD 316 (855)
Q Consensus 297 ~~LY~~TGd~ryL~LA~~F~ 316 (855)
+|||+.|||++||+.|+.+.
T Consensus 358 awLy~ATgd~~Yl~~a~~~~ 377 (639)
T 1clc_A 358 AEMWETLGDEEYLRDFENRA 377 (639)
T ss_dssp HHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHH
Confidence 89999999999999998764
No 48
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=86.02 E-value=2.8 Score=49.35 Aligned_cols=126 Identities=10% Similarity=-0.045 Sum_probs=69.9
Q ss_pred hHHHHHHHHHHHHHHHHHhhCCCcccccC-----Cchhhhhhhc----------cccccccchhhH-HHHHHHHHHHHHh
Q 043003 186 ETVKQKMDAVMSVLSECQKKIGTGYLSAF-----PSEFFDRLEN----------LVYVWAPYYTIH-KIMAGLLDQYTLA 249 (855)
Q Consensus 186 ~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~-----~~~~~~r~~~----------l~~~w~pyy~~H-kI~aGLld~Y~~T 249 (855)
+.+++.++.-.|.|.+||. ++|+-..+ .......|.. -|.+..|=...- -+-|+|..++++-
T Consensus 227 ~d~ldeikwg~D~llk~q~--~~g~~~~~~g~v~~~~~D~~w~g~~~~Pe~~~~~R~~~~p~t~~~~~~AAalAaas~vf 304 (609)
T 1ut9_A 227 PDILDEARWEIEFFKKMQV--TEKEDPSIAGMVHHKIHDFRWTALGMLPHEDPQPRYLRPVSTAATLNFAATLAQSARLW 304 (609)
T ss_dssp CHHHHHHHHHHHHHHHHBC--CTTTCGGGTTCEECEEEESSCCCSSCCGGGCCSBEEECCEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcc--CCCCcceEEEEecCCCCCcccCCCCCChhhCCCceeecCCCcHHHHHHHHHHHHHHHhc
Confidence 6899999999999999998 77751111 0000111210 111211211111 1234465666665
Q ss_pred CC------hhHHHHHHHHHHHHHHHhhhhhhccc-h----hhhcc--cccccccchHHHHHHHHHhcCCHHHHHHHHhcc
Q 043003 250 NN------GQALNITIWMADYFNTRVQNLIARSS-L----ERHYQ--TLNDESGGMNDVLYKLYGITKDPKHLKLAELFD 316 (855)
Q Consensus 250 G~------~kaL~ia~r~AD~~~~r~~~~~~~~~-~----~~~~~--~l~~E~GGmneaL~~LY~~TGd~ryL~LA~~F~ 316 (855)
.+ ++.|+.|+++-+|..+.-........ . ..... ....| +.-+-+|||+.|||+.||+.|+...
T Consensus 305 k~~d~~ya~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~~~~~Y~ss~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~~ 381 (609)
T 1ut9_A 305 KDYDPTFAADCLEKAEIAWQAALKHPDIYAEYTPGSGGPGGGPYNDDYVGDE---FYWAACELYVTTGKDEYKNYLMNSP 381 (609)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHCTTCCBCCCCSSSSCBSCCCCBSCCHHH---HHHHHHHHHHHHCCHHHHHHHHTST
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHhCcccccccccccCccCCCCCCCCCcccH---HHHHHHHHHHHhCCHHHHHHHHHhh
Confidence 44 57999999999998875322100000 0 00000 00112 3447789999999999999998754
No 49
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=85.59 E-value=2.7 Score=49.52 Aligned_cols=128 Identities=14% Similarity=0.091 Sum_probs=68.6
Q ss_pred ChHHHHHHHHHHHHHHHHH----hh--------CCCccccc-CCchhhhhhhccccccc-----cchh-hHHHHHHHHHH
Q 043003 185 NETVKQKMDAVMSVLSECQ----KK--------IGTGYLSA-FPSEFFDRLENLVYVWA-----PYYT-IHKIMAGLLDQ 245 (855)
Q Consensus 185 D~~L~~k~d~~Vd~L~~~Q----~~--------~~DGYL~a-~~~~~~~r~~~l~~~w~-----pyy~-~HkI~aGLld~ 245 (855)
-+.+++.++.-.|.|.+|| .. .+||...- +...+.+ ...-|..|. |=-. .--.-|+|..+
T Consensus 151 ~~d~ldeikwg~Dyllkmq~~~~~~~~g~~y~qVgdg~~Dh~~w~~Pe~-~~~~R~~y~v~~~~pgsd~a~~~AAAlAaA 229 (611)
T 2yik_A 151 AVHAEVILRYFNDYFMRCTFRDASGNVVAFCHQVGDGDIDHAFWGAPEN-DTMFRRGWFITKEKPGTDIISATAASLAIN 229 (611)
T ss_dssp HHHHHHHHHHHHHHHHHTEEECTTSCEEEEEEEESCHHHHTTCCSCGGG-CCSCCCEEEEBTTBCCHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHcccccccCCCCcEEEEeCCCCccccCCCChhh-CCCCCcceeecCCCCccHHHHHHHHHHHHH
Confidence 3788999999999999996 42 13331111 0000000 000122110 1100 11234566666
Q ss_pred HHHhCC------hhHHHHHHHHHHHHHHHhhhhhhccchhhhcccccccccc---hHHHHHHHHHhcCCHHHHHHHHhcc
Q 043003 246 YTLANN------GQALNITIWMADYFNTRVQNLIARSSLERHYQTLNDESGG---MNDVLYKLYGITKDPKHLKLAELFD 316 (855)
Q Consensus 246 Y~~TG~------~kaL~ia~r~AD~~~~r~~~~~~~~~~~~~~~~l~~E~GG---mneaL~~LY~~TGd~ryL~LA~~F~ 316 (855)
+++-.+ ++.|+.|+++-+|..+.-.....+.. .... +=++.+- +.-+-+|||+.|||++||+.|+.+.
T Consensus 230 S~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~~~y~~~~~--~~~~-~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~ 306 (611)
T 2yik_A 230 YMNFKDTDPQYAAKSLDYAKALFDFAEKNPKGVVQGED--GPKG-YYGSSKWQDDYCWAAAWLYLATQNEHYLDEAFKYY 306 (611)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCCCCGGG--TTTT-TSCCCCSHHHHHHHHHHHHHHHCCHHHHHHHHHHC
T ss_pred HHhccccCHHHHHHHHHHHHHHHHHHHHcCCcccCCCc--ccCc-CCCCCCcccHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 666554 57999999999998875322100000 0000 0011111 3347789999999999999998764
No 50
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=84.96 E-value=7.6 Score=42.76 Aligned_cols=135 Identities=10% Similarity=0.049 Sum_probs=79.2
Q ss_pred hHHHHHHHHHHH---hC--CChHHHHHHHHHHHHHHHHHhhCCCcccccCCc-hh-hhhh-----hccccccccchhhHH
Q 043003 170 GHYLSATAMAWA---ST--RNETVKQKMDAVMSVLSECQKKIGTGYLSAFPS-EF-FDRL-----ENLVYVWAPYYTIHK 237 (855)
Q Consensus 170 Gh~LsA~A~~~a---~t--~D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~~-~~-~~r~-----~~l~~~w~pyy~~Hk 237 (855)
.|=+++.++++. .+ .|+.+++.+...++.+.+.+...++|-. +|. .. .+.. ......-.-||-|=-
T Consensus 205 aHG~aGi~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~--wp~g~~~~~~~~~~~~~~~~~~~~~WChG~~ 282 (409)
T 2g0d_A 205 AHGLAGVGCILAYAHIKGYSNEASLSALQKIIFIYEKFELERKKQFL--WKDGLVADELKKEKVIREASFIRDAWCYGGP 282 (409)
T ss_dssp TTSHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCCCGGGTTC--CCSEECHHHHHHTSCCSCCSCCCCCSSSSHH
T ss_pred hhhHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHhcCCCCCc--CCCccccHhhhcccccccCCCCCCcCCCCCH
Confidence 344555444433 23 3899999999999999765431123320 111 00 0000 000001112343211
Q ss_pred -HHHHHHHHHHHhCChhHHHHHHHHHHHHHHHhhhhhhccchhhhcccc-cccccchHHHHHHHHHhcCCHHHHHHHHhc
Q 043003 238 -IMAGLLDQYTLANNGQALNITIWMADYFNTRVQNLIARSSLERHYQTL-NDESGGMNDVLYKLYGITKDPKHLKLAELF 315 (855)
Q Consensus 238 -I~aGLld~Y~~TG~~kaL~ia~r~AD~~~~r~~~~~~~~~~~~~~~~l-~~E~GGmneaL~~LY~~TGd~ryL~LA~~F 315 (855)
|...++.+|+.+++++.++.+.+.++.+.++-.. .....+ |.. .|+...|.++|+.|+|++|++.|+.|
T Consensus 283 Gi~~~l~~~~~~~~d~~~~~~a~~~~~~~~~~~~~--------~~~~~LCHG~-aG~~~~l~~l~~~~~~~~~~~~a~~~ 353 (409)
T 2g0d_A 283 GISLLYLYGGLALDNDYFVDKAEKILESAMQRKLG--------IDSYMICHGY-SGLIEICSLFKRLLNTKKFDSYMEEF 353 (409)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCTT--------CCSCCTTTSH-HHHHHHHHHHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhccC--------CCCCCCCChH-HHHHHHHHHHHHHhCCHHHHHHHHHc
Confidence 4445678899999999999999999988765100 000111 221 26888999999999999999999875
No 51
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=81.49 E-value=2.9 Score=47.21 Aligned_cols=70 Identities=16% Similarity=0.108 Sum_probs=45.1
Q ss_pred HHHHHHHHhCChhHHHHHHHHHHHHHHHhhhhhhc--cchhh--hcccccccccchHHHHHHHHHhcCCHHHHHHHHhc
Q 043003 241 GLLDQYTLANNGQALNITIWMADYFNTRVQNLIAR--SSLER--HYQTLNDESGGMNDVLYKLYGITKDPKHLKLAELF 315 (855)
Q Consensus 241 GLld~Y~~TG~~kaL~ia~r~AD~~~~r~~~~~~~--~~~~~--~~~~l~~E~GGmneaL~~LY~~TGd~ryL~LA~~F 315 (855)
.++-+|+.++++.+.++++.|+..+.- +.+ .. ..... +..... +. =+..+|.+||+.|++++||++|...
T Consensus 381 ~~vra~~~s~D~~Lw~~~~~ma~~~~l--gdi-~~~~~~~~~~~~~~~~~-sp-~lL~allEL~~atq~~~~l~lA~~~ 454 (543)
T 2v8i_A 381 SYARAYAIDNDPLLWKVARGIANDQGL--GDI-GTAPGKEVKVNMDTTNS-DP-YALFALLDLYHASQVADYRKLAEKI 454 (543)
T ss_dssp HHHHHHHHSCCHHHHHHHHHHHHHTTC--EEC-TTBTTBSCEECTTCCCC-CH-HHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhhCCc--ccc-CCCcCcccccccCCCCc-CH-HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 477899999999999999998775421 110 00 00000 000000 00 1346999999999999999999875
No 52
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=81.19 E-value=5.7 Score=46.52 Aligned_cols=120 Identities=14% Similarity=0.198 Sum_probs=69.0
Q ss_pred HHHHHHHHHhC-------CChHHHHHHHHHHHHHHHHHhhCCCcccccCCchhhhhhhccccccccchhhHHHHHHHHHH
Q 043003 173 LSATAMAWAST-------RNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQ 245 (855)
Q Consensus 173 LsA~A~~~a~t-------~D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~~~~~~r~~~l~~~w~pyy~~HkI~aGLld~ 245 (855)
|-|+|++.++. ..+++.+.++...+.+.+.... |...-.... ..=| .++.+ ++..
T Consensus 254 l~aAALA~Asrvf~d~~~~a~~~L~aA~~a~~fa~~~~~~----y~~~g~~~~----------~De~---~~~WA-A~eL 315 (586)
T 3h7l_A 254 VAIAALAAASRLGVHGEYDQQKYRNAAENGYWHLKEHNTQ----YLNDGEENI----------IDEY---CALLA-SVEL 315 (586)
T ss_dssp HHHHHHHHHTTSSSCSSSCHHHHHHHHHHHHHHHHHHHHH----HSTTSCCCH----------HHHH---HHHHH-HHHH
T ss_pred HHHHHHHHHhcccCCCCcChHHHHHHHHHHHHHHHhcCcc----ccCCCCccc----------hhHH---HHHHH-HHHH
Confidence 44555555542 2467788888888877766441 221111111 1112 12445 4599
Q ss_pred HHHhCChhHHHHHHHHHHHHHHHhhhhhhccchhhhcc--------cccccccch-HHHHHHHHHhcCCHHHHHHHH
Q 043003 246 YTLANNGQALNITIWMADYFNTRVQNLIARSSLERHYQ--------TLNDESGGM-NDVLYKLYGITKDPKHLKLAE 313 (855)
Q Consensus 246 Y~~TG~~kaL~ia~r~AD~~~~r~~~~~~~~~~~~~~~--------~l~~E~GGm-neaL~~LY~~TGd~ryL~LA~ 313 (855)
|++||+++.|+.|...++.+.+++..-.. ..-.|. ..+....|+ ..+|++|.++|+++++.+.|+
T Consensus 316 y~ATgd~~YL~~a~~~a~~l~~~~~~~~~---~g~~w~~~d~~~r~~~d~a~~gl~~iaLl~l~~~~~d~~~~~~a~ 389 (586)
T 3h7l_A 316 FKATKETRYLEESRLWAQRLVARQMSDEQ---IQHFWSANQDGSRPYFHAAEAGLPTIALCEYLAIEDDSVQTESVK 389 (586)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHTTEECCSS---CSSEEBSSSSSSSBCCCTTTTTHHHHHHHHHHHHCCSTTTTHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhccCCcc---CCCcCCCcccCCcccccccccHHHHHHHHHhhhhcCChHHHHHHH
Confidence 99999999999999999999887642100 001121 112222333 468999999999875554443
No 53
>2kll_A Interleukin-33; beta-trefoil, cytokine, polymorphism, secreted; NMR {Homo sapiens}
Probab=73.97 E-value=60 Score=30.54 Aligned_cols=88 Identities=14% Similarity=0.116 Sum_probs=54.8
Q ss_pred CCCCcceEEEEEEcCCCCCcccccccccCCcceecCCCCCCCcceecccCCcceEEe---cCCCCceEEEeecCCCCCCe
Q 043003 693 GTGGDANATFRLIGNDQRPINFTTVKNVISKQVMFEPFDFPGKLLMQQGNNDSLVIA---NNPGNSVFQVNAGLDGKPDT 769 (855)
Q Consensus 693 g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~lepfd~Pg~~v~~~~~~~~l~v~---~~~~~s~f~~vpgl~g~~~~ 769 (855)
+.+.--...||.+.....| -.+..+.+|+.+|...=..+.-.+--...++++.+. +..+++.|.+.--.. ...
T Consensus 43 kdqekDkVLlryY~Sq~ps--~etgdgvdg~~LmVnlSP~KDf~LHANnkehSVELqkce~~lPdQaFFvlH~~s--s~c 118 (161)
T 2kll_A 43 KDEKKDKVLLSYYESQHPS--NESGDGVDGKMLMVTLSPTKDFWLHANNKEHSVELHKCEKPLPDQAFFVLHNMH--SNC 118 (161)
T ss_dssp SCCCCCCEEEEEEECCCCT--TTSCCCCSCCCEEEEEESSSSEEEEEETTTTEEEEEECCSSCCTTTCEEEEECS--SSC
T ss_pred cchhcceEEEEeccCCCCc--cccCCCccccEEEEEcccccceeEecCCccceeEeecccCCCCcceEEEEecCC--Cce
Confidence 3344556778866433222 133445677776544333345555444566667763 446888888875443 479
Q ss_pred EEEeecCCCCeEEEe
Q 043003 770 VSLESVSRKGCFVFS 784 (855)
Q Consensus 770 vsles~~~pg~~~~~ 784 (855)
||||-.+.||.|+-+
T Consensus 119 VSFEck~~PGvfiGV 133 (161)
T 2kll_A 119 VSFECKTDPGVFIGV 133 (161)
T ss_dssp EEEEESSSTTEEEEE
T ss_pred EEEEecCCCceEEEe
Confidence 999999999999965
No 54
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=72.14 E-value=11 Score=42.58 Aligned_cols=86 Identities=16% Similarity=0.199 Sum_probs=60.2
Q ss_pred hHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhCCCcccccCCchhhhhhhccccccccchhhHHHHHHHHHHHHHh
Q 043003 170 GHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYTLA 249 (855)
Q Consensus 170 Gh~LsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~~~~~~r~~~l~~~w~pyy~~HkI~aGLld~Y~~T 249 (855)
.+||=+++.+|+.++|++|-+.+..|...+ +=|=|++.... ...++.-...-.|| +++ ||++.|++|
T Consensus 376 ~~yll~~vra~~~s~D~~Lw~~~~~ma~~~-------~lgdi~~~~~~-~~~~~~~~~~~sp~----lL~-allEL~~at 442 (543)
T 2v8i_A 376 NEFLISYARAYAIDNDPLLWKVARGIANDQ-------GLGDIGTAPGK-EVKVNMDTTNSDPY----ALF-ALLDLYHAS 442 (543)
T ss_dssp HHHHHHHHHHHHHSCCHHHHHHHHHHHHHT-------TCEECTTBTTB-SCEECTTCCCCCHH----HHH-HHHHHHHHH
T ss_pred chhhHHHHHHHHcCCCHHHHHHHHHHHhhC-------CccccCCCcCc-ccccccCCCCcCHH----HHH-HHHHHHHHh
Confidence 689999999999999999988777655543 34555543211 11122122344455 244 578999999
Q ss_pred CChhHHHHHHHHHHHHHHH
Q 043003 250 NNGQALNITIWMADYFNTR 268 (855)
Q Consensus 250 G~~kaL~ia~r~AD~~~~r 268 (855)
++++.++.|.++++-+.++
T Consensus 443 q~~~~l~lA~~~g~nl~~~ 461 (543)
T 2v8i_A 443 QVADYRKLAEKIGDNIIKI 461 (543)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 9999999999999988864
No 55
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=53.49 E-value=32 Score=38.72 Aligned_cols=123 Identities=11% Similarity=0.122 Sum_probs=64.3
Q ss_pred hHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhCCCc-ccccCCchhhhhhhccccccccchhhHHHHHHHHHHHHH
Q 043003 170 GHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTG-YLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYTL 248 (855)
Q Consensus 170 Gh~LsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~DG-YL~a~~~~~~~r~~~l~~~w~pyy~~HkI~aGLld~Y~~ 248 (855)
-..+=|++.+|..|+|+..++.+........++|. .+. +... -.|.--..+..+ |+ .+.
T Consensus 211 DE~~WAAa~Ly~aTgd~~Yl~~a~~~~~~~~~~~~--~~~~~~~~-------------~~Wd~~~~g~~~---ll--a~~ 270 (441)
T 1ia6_A 211 DDLAWAATWLYTATNDSTYITDAEQFITLGNTMNE--NKMQDKWT-------------MCWDDMYVPAAL---RL--AQI 270 (441)
T ss_dssp HHHHHHHHHHHHHHCCTHHHHHHHHHTTC--------CGGGCSSC-------------SSSSCCHHHHHH---HH--HHH
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhccc--ccccCCCc-------------CCccchHHHHHH---HH--Hhc
Confidence 35567999999999999999998876654444443 110 1000 123322233222 22 234
Q ss_pred hCChhHHHHHHHHHHHHHHHhhhhhhccchhhhcccccccccchHHHH--HHHHHhcCCHHHHHHHHhc
Q 043003 249 ANNGQALNITIWMADYFNTRVQNLIARSSLERHYQTLNDESGGMNDVL--YKLYGITKDPKHLKLAELF 315 (855)
Q Consensus 249 TG~~kaL~ia~r~AD~~~~r~~~~~~~~~~~~~~~~l~~E~GGmneaL--~~LY~~TGd~ryL~LA~~F 315 (855)
+++++..+.+.+.++++...+.....++.-...|... .+ -.+.++ .-.++.+++++|+++|+.=
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~WGs~--~~-~~~~a~l~~~~~~~~~~~~y~~~A~~q 336 (441)
T 1ia6_A 271 TGKQIYKDAIEFNFNYWKTQVTTTPGGLKWLSNWGVL--RY-AAAESMVMLVYCKQNPDQSLLDLAKKQ 336 (441)
T ss_dssp HCCHHHHHHHHHHHHHHHHTSCBCTTSCBCCCSTTHH--HH-HHHHHHHHHHHHHHSCCHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHhhcccCCCCceecCCcchH--HH-HHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 7888888888888887764332110111101112111 00 023332 2236789999999999854
No 56
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=50.28 E-value=36 Score=38.18 Aligned_cols=121 Identities=10% Similarity=0.048 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhCCCcccccCCchhhhhhhccccccccchhhHHHHHHHHHHHHHhC
Q 043003 171 HYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYTLAN 250 (855)
Q Consensus 171 h~LsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~~~~~~r~~~l~~~w~pyy~~HkI~aGLld~Y~~TG 250 (855)
-.+=|++.+|..|+|+..++.+....+.+... .+.. .-.|.--..+-.+ ...+.++
T Consensus 214 E~~WAAa~Ly~aTgd~~Yl~~~~~~~~~~~~~------~~~~-------------~~~Wd~~~~g~~~-----lla~~~~ 269 (433)
T 1ks8_A 214 ELVWAAAWLYRATNDNTYLNTAESLYDEFGLQ------NWGG-------------GLNWDSKVSGVQV-----LLAKLTN 269 (433)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHTTGG------GSCC-------------CCCSSCCHHHHHH-----HHHHHHC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCcC------cCcC-------------CcCccchhhHHHH-----HHhhccC
Confidence 45679999999999999999988765443110 0000 0123322222111 1224578
Q ss_pred ChhHHHHHHHHHHHHHHHhhhhhhccchhhhcccccccccchHHHHHHHHHh-cCCHHHHHHHHhcc
Q 043003 251 NGQALNITIWMADYFNTRVQNLIARSSLERHYQTLNDESGGMNDVLYKLYGI-TKDPKHLKLAELFD 316 (855)
Q Consensus 251 ~~kaL~ia~r~AD~~~~r~~~~~~~~~~~~~~~~l~~E~GGmneaL~~LY~~-TGd~ryL~LA~~F~ 316 (855)
++++.+.++++++++.........++.....|....- ...+...+...++. +++.+|+++|+.-.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~~-~~n~a~l~~~~~~~~~~~~~y~~~A~~ql 335 (433)
T 1ks8_A 270 KQAYKDTVQSYVNYLINNQQKTPKGLLYIDMWGTLRH-AANAAFIMLEAAELGLSASSYRQFAQTQI 335 (433)
T ss_dssp CHHHHHHHHHHHHHHHHTSCBCTTSCBCCCSTTHHHH-HHHHHHHHHHHHHTTSSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcCCcCCCCceeecCCchhHH-HHHHHHHHHHHHhcCCCHHHHHHHHHHhH
Confidence 8999999999999988654321111111112211100 00011233444566 89999999997543
No 57
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=43.98 E-value=1e+02 Score=36.21 Aligned_cols=131 Identities=15% Similarity=0.135 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHhhhhhhcc--c--hhhhcccccccccchHHHHHHHHHhcCCHHHHHHH
Q 043003 237 KIMAGLLDQYTLANNGQALNITIWMADYFNTRVQNLIARS--S--LERHYQTLNDESGGMNDVLYKLYGITKDPKHLKLA 312 (855)
Q Consensus 237 kI~aGLld~Y~~TG~~kaL~ia~r~AD~~~~r~~~~~~~~--~--~~~~~~~l~~E~GGmneaL~~LY~~TGd~ryL~LA 312 (855)
++.||+ -.|++||+++.|+.+.+.++- +....... . -.-.|. .-..|. .+-|.++|++++|.+-|
T Consensus 216 l~WAAa-wLy~ATgd~~Yl~~a~~~~~~----~~~~~~~~~~~~~~~~~Wd---~~~~g~---~~lla~~~~~~~y~~~a 284 (605)
T 1tf4_A 216 LVWGAY-WLYKATGDDSYLAKAEYEYDF----LSTEQQTDLRSYRWTIAWD---DKSYGT---YVLLAKETGKQKYIDDA 284 (605)
T ss_dssp HHHHHH-HHHHHHCCHHHHHHHHHHGGG----SCBCTTSSCBCCSSCCSSS---CCHHHH---HHHHHHHHCCHHHHHHH
T ss_pred HHHHHH-HHHHHhCCHHHHHHHHHHHHh----ccccccccccccccccccc---chHHHH---HHHHHhccChHHHHHHH
Confidence 445654 899999999999988874321 11000000 0 000121 111122 23345679999999999
Q ss_pred HhccccccccccccccC-CCCCC-cccCcchH--h--HHH-HHHH-HHhC----ChHHHHHHHHHHHHhcccC----eEe
Q 043003 313 ELFDKPCFLGLLAVKAD-NIAGL-HANTHIPL--V--CGV-QNRY-ELTG----DEQSMAMGTFFMDIINSSH----SYA 376 (855)
Q Consensus 313 ~~F~~~~~~~~la~~~d-~l~g~-HanthiP~--~--~G~-a~~Y-~~TG----D~~y~~aa~~fwd~V~~~~----~Y~ 376 (855)
+.+.+...-+.-..+.. ...|+ +.+.--+. + .++ +.+| ...+ +++|++.++.-.|-|.... +|+
T Consensus 285 ~~~~~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~~~~n~a~l~~~~a~~~~~~~~~~~y~~~A~~qidYiLG~Np~~~Syv 364 (605)
T 1tf4_A 285 NRWLDYWTVGVNGQRVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVIDDPVRKQRYHDFAVRQINYALGDNPRNSSYV 364 (605)
T ss_dssp HHHHHHTTTCBTTBCCCBCTTSCBCCCSSSHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTCSTTCCCSB
T ss_pred HHHHHHHhcccCCCccccCCCcceecCCccHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHhcCCCCCCcceE
Confidence 88754221000000000 00010 00000111 1 111 2223 3333 4789999999999887653 888
Q ss_pred ec
Q 043003 377 TG 378 (855)
Q Consensus 377 TG 378 (855)
+|
T Consensus 365 vG 366 (605)
T 1tf4_A 365 VG 366 (605)
T ss_dssp TT
T ss_pred ec
Confidence 86
No 58
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=42.35 E-value=1.2e+02 Score=35.64 Aligned_cols=132 Identities=14% Similarity=0.048 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHhCChhHHHHHHHHHHHHHHHhhhhhhccchhhhcc-cccccccchHHHHHHHHHhcCCHHHHHHHHhcc
Q 043003 238 IMAGLLDQYTLANNGQALNITIWMADYFNTRVQNLIARSSLERHYQ-TLNDESGGMNDVLYKLYGITKDPKHLKLAELFD 316 (855)
Q Consensus 238 I~aGLld~Y~~TG~~kaL~ia~r~AD~~~~r~~~~~~~~~~~~~~~-~l~~E~GGmneaL~~LY~~TGd~ryL~LA~~F~ 316 (855)
+.||+ -.|++||+++.|+.+.+..+.+ ............|. ....-..| +.+-|.++|+++.|.+.++.+.
T Consensus 215 ~WAAa-wLy~ATgd~~Yl~~a~~~~~~~----~~~~~~~~~~~~~~~~Wd~~~~g---~~~lla~~~~~~~~~~~~~~~~ 286 (614)
T 1g87_A 215 SWAAV-WLYLATNDSTYLDKAESYVPNW----GKEQQTDIIAYKWGQCWDDVHYG---AELLLAKLTNKQLYKDSIEMNL 286 (614)
T ss_dssp HHHHH-HHHHHHCCHHHHHHHHHTGGGS----CBCTTSSSBCCSSCCBTTBCHHH---HHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHH-HHHHHhCCHHHHHHHHHHHHhh----ccccccccccccCCcCccchHHH---HHHHHHhccCcHHHHHHHHHHH
Confidence 44554 8999999999999888643321 10000000000010 01111112 3334566799999999888765
Q ss_pred ccccccccccccC-CCCCC------cccCcchHhHHH--HHHHHHhC-----ChHHHHHHHHHHHHhccc--CeEeec
Q 043003 317 KPCFLGLLAVKAD-NIAGL------HANTHIPLVCGV--QNRYELTG-----DEQSMAMGTFFMDIINSS--HSYATG 378 (855)
Q Consensus 317 ~~~~~~~la~~~d-~l~g~------HanthiP~~~G~--a~~Y~~TG-----D~~y~~aa~~fwd~V~~~--~~Y~TG 378 (855)
+...-+.-..+.. ...|+ -.+.++- -.++ +..+++++ +++|++.++.-.|-|..+ ++|++|
T Consensus 287 ~~~~~~~~~~~~~~tp~Gl~~~~~Wgs~~~~~-n~afl~~~y~~~~~~~~~~~~~y~~~A~~qidYiLG~n~~SyvvG 363 (614)
T 1g87_A 287 DFWTTGVNGTRVSYTPKGLAWLFQWGSLRHAT-TQAFLAGVYAEWEGCTPSKVSVYKDFLKSQIDYALGSTGRSFVVG 363 (614)
T ss_dssp HHHTTCBTTBCCEECTTSCEECCSSSHHHHHH-HHHHHHHHHHHSTTSCHHHHHHHHHHHHHHHHHHHTTTSSCCBTT
T ss_pred HHhhhccCCCccccCCCCceeccCCCcHHHHH-HHHHHHHHHHHhhCCCccCHHHHHHHHHHHHHHhcCCCCcceEec
Confidence 3111000000000 00011 0111111 1121 23357777 789999999888887653 577776
No 59
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=41.62 E-value=4.1e+02 Score=29.58 Aligned_cols=92 Identities=12% Similarity=-0.078 Sum_probs=59.2
Q ss_pred hhHHHHHHHHHHHh-C--CChHHHHHHHHHHHHHHHHHhhCCCcccccCCchhhhhhhccccccccch---hhHHHHHHH
Q 043003 169 LGHYLSATAMAWAS-T--RNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYY---TIHKIMAGL 242 (855)
Q Consensus 169 ~Gh~LsA~A~~~a~-t--~D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~~~~~~r~~~l~~~w~pyy---~~HkI~aGL 242 (855)
+.-=|-+++.++.. + +++..++-+++-|+.|...|- +||=..+|.... ..+ -.+-||+ ++|.|+. |
T Consensus 151 Ta~vl~aL~rv~~~~t~~~~~~y~~Ai~Rgl~wlL~mQ~--~nGGWpqFdpdn-~~y----~~~IpFnDDvt~rvle~-L 222 (408)
T 1r76_A 151 TVTEIRFLAQVVSQLAPEEAAPYRDAALKGIEYLLASQF--PNGGWPQVWPLE-GGY----HDAITYNDDALVHVAEL-L 222 (408)
T ss_dssp THHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHSC--TTSCCBSBSSCC-CGG----GGSEECGGGHHHHHHHH-H
T ss_pred HHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHHHccC--CCCCCcCcCccc-ccc----ccCCCcCcHHHHHHHHH-H
Confidence 45668888888887 7 899999999999999999999 776444443211 001 1122333 3444442 3
Q ss_pred HHHHHHhC---------ChhHHHHHHHHHHHHHHH
Q 043003 243 LDQYTLAN---------NGQALNITIWMADYFNTR 268 (855)
Q Consensus 243 ld~Y~~TG---------~~kaL~ia~r~AD~~~~r 268 (855)
.+...-.+ .+++.+.+.|..+||.+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~av~Rgi~~Ll~~ 257 (408)
T 1r76_A 223 SDIAAGRDGFGFVPPAIRTRALEATNAAIHCIVET 257 (408)
T ss_dssp HHHHHTCTTCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccCcccccchhhhhhHHHHHHHHHHHHHHh
Confidence 22222111 237889999999999864
No 60
>2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=40.60 E-value=2e+02 Score=27.47 Aligned_cols=88 Identities=15% Similarity=0.193 Sum_probs=48.4
Q ss_pred ceEEEe-eCCceEEeecCCC--CCCCcceEEEEEEcCCCCCcccccccccCCcceecCCCCCCCcceecccCCcceEEe-
Q 043003 674 SSLVLM-KNQSVTIEPWPAA--GTGGDANATFRLIGNDQRPINFTTVKNVISKQVMFEPFDFPGKLLMQQGNNDSLVIA- 749 (855)
Q Consensus 674 ~~~~~~-~~~~~~~~~~~~~--g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~lepfd~Pg~~v~~~~~~~~l~v~- 749 (855)
..|... .||.+++. .|.. +....-.-+|.+..-+. ..|+|.... |.|++-. .+..|+-.
T Consensus 34 ~~y~~A~~~G~~t~~-~~~~~~~~~~~~~E~f~l~~~~~-------------~~v~LRs~~--GkYLs~~-~~G~v~a~a 96 (155)
T 2yug_A 34 GAYIHALDNGLFTLG-APHREVDEGPSPPEQFTAVKLSD-------------SRIALKSGY--GKYLGIN-SDGLVVGRS 96 (155)
T ss_dssp SCBEEECTTSCEEEC-CCCSSSSCCCCTTTCEEEEECSS-------------SCEEEEETT--SCBEEEC-SSSBEEECC
T ss_pred CCEEEEEcCCcEEEc-cccccccCCCCCcceEEEEECCC-------------CEEEEEeCC--CCEEEec-CCCcEEecc
Confidence 345555 56655553 2322 33444555787663211 134443322 6666652 12222221
Q ss_pred -cCCCCceEEEeecCCCCCCeEEEeecCCCCeEEEe
Q 043003 750 -NNPGNSVFQVNAGLDGKPDTVSLESVSRKGCFVFS 784 (855)
Q Consensus 750 -~~~~~s~f~~vpgl~g~~~~vsles~~~pg~~~~~ 784 (855)
.-++..+|.+++- + |.++|.+. -|+||.+
T Consensus 97 ~~~g~~E~F~l~~~-~---G~~aLra~--nG~yl~~ 126 (155)
T 2yug_A 97 DAIGPREQWEPVFQ-D---GKMALLAS--NSCFIRC 126 (155)
T ss_dssp SSCCTTTBEEEECS-T---TCCEEEET--TSCBEEE
T ss_pred CCCCCCCEEEEEEE-C---CEEEEEeC--CCCEEEE
Confidence 1148899999987 3 57999993 4999986
No 61
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=38.06 E-value=98 Score=33.62 Aligned_cols=92 Identities=14% Similarity=-0.017 Sum_probs=60.4
Q ss_pred hhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhCCCcccccCCchhhhhhhccccccccch---hhHHHHHHHHHH
Q 043003 169 LGHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYY---TIHKIMAGLLDQ 245 (855)
Q Consensus 169 ~Gh~LsA~A~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~~~~~~r~~~l~~~w~pyy---~~HkI~aGLld~ 245 (855)
+..=|-+++.++..++++..++-+++-|+.|...|- ++|=..+|.... ..--.+-||+ ++|.|+. |.+.
T Consensus 76 Ta~vl~~Larv~~~~~~~~y~~Ai~Rgl~wlL~mQ~--~nGGWpqFdpd~-----~~Yl~~IpFnDDvtarvLel-L~~~ 147 (332)
T 1gxm_A 76 TITEMVFLAEVYKSGGNTKYRDAVRKAANFLVNSQY--STGALPQFYPLK-----GGYSDHATFNDNGMAYALTV-LDFA 147 (332)
T ss_dssp THHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC--TTSCCBSEESCC-----SGGGGSEECGGGHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHhccccchHHHHHHHHHHHHHHhccC--CCCCccccCCCc-----ccccccCCcchHHHHHHHHH-HHHH
Confidence 567788889999889999999999999999999999 776555553210 0011223444 3444432 2222
Q ss_pred HHHh-CC----------hhHHHHHHHHHHHHHHH
Q 043003 246 YTLA-NN----------GQALNITIWMADYFNTR 268 (855)
Q Consensus 246 Y~~T-G~----------~kaL~ia~r~AD~~~~r 268 (855)
.+.. +- .++.+.+.|..+||.+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~av~Rgid~Llk~ 181 (332)
T 1gxm_A 148 ANKRAPFDTDVFSDNDRTRFKTAVTKGTDYILKA 181 (332)
T ss_dssp HTTCTTSCSTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhccCCccccccccchhhhhHHHHHHHHHHHHHh
Confidence 1100 11 57888999999999875
No 62
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=35.07 E-value=1.2e+02 Score=34.48 Aligned_cols=132 Identities=14% Similarity=0.045 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHhCChhHHHHHHHHHHHHHHHhhhhhhccchhhhcc-cccccccchHHHHHHHHHhcCCH-HHHHHHHhc
Q 043003 238 IMAGLLDQYTLANNGQALNITIWMADYFNTRVQNLIARSSLERHYQ-TLNDESGGMNDVLYKLYGITKDP-KHLKLAELF 315 (855)
Q Consensus 238 I~aGLld~Y~~TG~~kaL~ia~r~AD~~~~r~~~~~~~~~~~~~~~-~l~~E~GGmneaL~~LY~~TGd~-ryL~LA~~F 315 (855)
+.|++ -.|++||+++.|+.++..++.+. ...........|. ....-..| +.+-|.++|+++ +|++.++.+
T Consensus 237 ~WAAa-wLy~ATgd~~Yl~~a~~~~~~~~----~~~~~~~~~~~~~~~Wd~~~~g---~~~lla~~~~~~~~~~~~~~~~ 308 (466)
T 2xfg_A 237 SWAAV-WLYLATNDSSYLDKAESYSDKWG----YEPQTNIPKYKWAQCWDDVTYG---TYLLLARIKNDNGKYKEAIERH 308 (466)
T ss_dssp HHHHH-HHHHHHCCHHHHHHHHHTTTTSC----BSTTSSSBCCSSCCBTTBCHHH---HHHHHHHHHCSSCHHHHHHHHH
T ss_pred HHHHH-HHHHHhCCHHHHHHHHHHHHHhc----cccccccccccCcCCcchhHHH---HHHHHHHhcCCcHHHHHHHHHH
Confidence 44554 89999999999998877433211 0000000000010 00111112 233356668877 888887775
Q ss_pred cccccccccccccC-CCCC------CcccCcchHhHHH--HHHHHHhC-----ChHHHHHHHHHHHHhccc--CeEeec
Q 043003 316 DKPCFLGLLAVKAD-NIAG------LHANTHIPLVCGV--QNRYELTG-----DEQSMAMGTFFMDIINSS--HSYATG 378 (855)
Q Consensus 316 ~~~~~~~~la~~~d-~l~g------~HanthiP~~~G~--a~~Y~~TG-----D~~y~~aa~~fwd~V~~~--~~Y~TG 378 (855)
.+...-+.-..+.. ...| .-.+.++- -.++ ...+++++ +++|++.++.-.|-|..+ ++|++|
T Consensus 309 ~~~~~~~~~~~~~~~tp~Gl~~~~~Wgs~~~~~-n~afl~~~y~~~~~~~~~~~~~y~~~A~~qidYiLG~N~~SyvvG 386 (466)
T 2xfg_A 309 LDWWTTGYNGERITYTPKGLAWLDQWGSLRYAT-TTAFLACVYSDWENGDKEKAKTYLEFARSQADYALGSTGRSFVVG 386 (466)
T ss_dssp HHHHTTCBTTBCCCBCTTSCBCCCSSSHHHHHH-HHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHTTTSSCCBTT
T ss_pred HHHHHhccCCCccccCCccccccCCCCchHHHH-HHHHHHHHHHHhcCCCcccHHHHHHHHHHhHHhhcCCCCcceEec
Confidence 43211000000000 0001 01111111 1122 22346677 789999999999987664 577776
No 63
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=34.36 E-value=77 Score=37.99 Aligned_cols=112 Identities=12% Similarity=0.065 Sum_probs=63.9
Q ss_pred CCcccCCccc-ccc--hhhHHHHHHHHHHHhC---CChHHHHHHHHHHHHHHHHHhhCCCcccccCCchhhhhh-hccc-
Q 043003 155 GGWEDQKMEL-RGH--FLGHYLSATAMAWAST---RNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRL-ENLV- 226 (855)
Q Consensus 155 gGWe~~dsdl-rGH--~~Gh~LsA~A~~~a~t---~D~~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~~~~~~r~-~~l~- 226 (855)
|||-+.+.+- ..+ .++.-|.|++.+.... +++...+.++..|+.|..+|. +||=.++|.......| +.+.
T Consensus 440 GGW~f~~~~~~~pd~d~TA~vl~aL~~~~~~~~~~g~~~~~~~i~~av~wLls~Q~--~DGgw~a~~~~~~~~~l~~i~~ 517 (732)
T 1w6k_A 440 GGFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPRERLCDAVAVLLNMRN--PDGGFATYETKRGGHLLELLNP 517 (732)
T ss_dssp TCCBSSCTTTCCBCHHHHHHHHHHHHHHHHHCTTCCSCCCHHHHHHHHHHHHTTCC--TTSCBCSSSCCCSCGGGGGGCC
T ss_pred CeecCCCCCCCCCccccHHHHHHHHHHHhcccccccchhhHHHHHHHHHHHHHhcC--CCCCEEeecCCCchHHHhhCcc
Confidence 7887754320 011 2466777777765543 345667889999999999999 8987776643211111 1110
Q ss_pred -----c-ccc---cchhhHHHHHHHHHHHHH-hCC--hhHHHHHHHHHHHHHHHh
Q 043003 227 -----Y-VWA---PYYTIHKIMAGLLDQYTL-ANN--GQALNITIWMADYFNTRV 269 (855)
Q Consensus 227 -----~-~w~---pyy~~HkI~aGLld~Y~~-TG~--~kaL~ia~r~AD~~~~r~ 269 (855)
+ ... +++|.+-|++ |...-.. .+. ++.-..+.|.++|+.+..
T Consensus 518 ~e~fg~~~~d~s~v~~Ta~vL~a-L~~~~~~~~~~~~~~~~~~i~rAv~yL~~~Q 571 (732)
T 1w6k_A 518 SEVFGDIMIDYTYVECTSAVMQA-LKYFHKRFPEHRAAEIRETLTQGLEFCRRQQ 571 (732)
T ss_dssp CSSCSSCSSCCCBHHHHHHHHHH-HHHHHHHCTTSSHHHHHHHHHHHHHHHHHHS
T ss_pred hhcccccccCCCcchHHHHHHHH-HHHhccccccccchhhHHHHHHHHHHHHhhc
Confidence 0 111 3466665544 5333222 122 345667888999998653
No 64
>2wry_A IL-1 beta, interleukin-1BETA; immune system, pyrogen, mitogen, inflammatory response; 1.58A {Gallus gallus} PDB: 3nj5_A
Probab=33.60 E-value=27 Score=34.14 Aligned_cols=39 Identities=18% Similarity=0.371 Sum_probs=27.8
Q ss_pred eEEEeecCCCCCCeEEEeecCCCCeEEEeccccCCCceEEEeec
Q 043003 756 VFQVNAGLDGKPDTVSLESVSRKGCFVFSDVNLKAGTALKLNCQ 799 (855)
Q Consensus 756 ~f~~vpgl~g~~~~vsles~~~pg~~~~~~~~~~~g~~~~~~~~ 799 (855)
-|+-..|. ..+.+|||+.+||||+-. ....++-|.+...
T Consensus 110 Fyr~~~G~---~~~~tfESaa~PgWFI~T--s~~~~qPV~Lt~~ 148 (162)
T 2wry_A 110 FYRLDSPT---EGTTRFESAAFPGWFICT--SLQPRQPVGITNQ 148 (162)
T ss_dssp EEEEEETT---TTEEEEEESSSTTCEEEB--CSSSSEECEEESS
T ss_pred EEEecCCC---CCceEEEeccCCCcEEEc--CCCCCeEEEeecC
Confidence 45555664 258999999999999974 2234677888653
No 65
>1md6_A Interleukin 1 family, member 5 (delta); beta triple, alpha helix, immune system; 1.60A {Mus musculus} SCOP: b.42.1.2
Probab=32.95 E-value=26 Score=33.97 Aligned_cols=29 Identities=28% Similarity=0.377 Sum_probs=22.7
Q ss_pred eEEEeecCCCCeEEEeccccCCCceEEEeec
Q 043003 769 TVSLESVSRKGCFVFSDVNLKAGTALKLNCQ 799 (855)
Q Consensus 769 ~vsles~~~pg~~~~~~~~~~~g~~~~~~~~ 799 (855)
+.+|||+.+||||+-. ....++-|.+...
T Consensus 107 ~~tfESaa~PgWFI~T--s~~~~qPV~Lt~~ 135 (154)
T 1md6_A 107 TSSFESAAYPGWFLCT--SPEADQPVRLTQI 135 (154)
T ss_dssp CEEEEESSSTTCEEEB--CSSSSEECEEECC
T ss_pred eEEEEeccCCCcEEec--CCCCCeEEEeecC
Confidence 8999999999999974 2334677888653
No 66
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=28.99 E-value=1.4e+02 Score=27.65 Aligned_cols=38 Identities=11% Similarity=0.128 Sum_probs=26.5
Q ss_pred eEEEEEEeCCCCCeeeEEEEeecC-CcCCCCceEEECCccc
Q 043003 538 RMALTFTSNKGPGVSSVLNLRIPF-WANPNGGKATLNKDNL 577 (855)
Q Consensus 538 ~V~ltV~~~~~~~~~ftL~LRIP~-Wa~~~~~~i~VNG~~~ 577 (855)
.|+++|+.. +....+|.+|.-. ........|.|||+.+
T Consensus 40 ~v~~~V~v~--~aG~Y~l~~ryang~~~~r~~~l~VNG~~~ 78 (139)
T 2w87_A 40 AVVWAIDAT--SSGRRTLTIRYANGGTANRNGSLVINGGSN 78 (139)
T ss_dssp EEEEEEEES--SCEEEEEEEEEECCSSSCCCEEEEETTTTT
T ss_pred EEEEEEECC--CCcEEEEEEEEECCCCCCceEEEEECCEEc
Confidence 577777763 3567889999864 4322258999999876
No 67
>1ilt_A Interleukin-1 receptor antagonist; cytokine; 2.00A {Homo sapiens} SCOP: b.42.1.2 PDB: 1ilr_1 1ira_X* 2irt_A 1irp_A
Probab=28.12 E-value=35 Score=32.98 Aligned_cols=30 Identities=27% Similarity=0.400 Sum_probs=22.5
Q ss_pred eEEEeecCCCCeEEEeccccCCCceEEEeecC
Q 043003 769 TVSLESVSRKGCFVFSDVNLKAGTALKLNCQQ 800 (855)
Q Consensus 769 ~vsles~~~pg~~~~~~~~~~~g~~~~~~~~~ 800 (855)
+.+|||+.+||||+-.. ...++-|.+....
T Consensus 108 ~~~fESaa~PgWFI~Ts--~~~~~PV~Lt~~~ 137 (152)
T 1ilt_A 108 TTSFESAACPGWFLCTA--MEADQPVSLTNMP 137 (152)
T ss_pred ceEEEeccCCCcEEEcC--CcCCeEEEeecCC
Confidence 89999999999999742 2246678776533
No 68
>2nvh_A IL-1 beta, interleukin-1 beta, catabolin; water, hydration, protein folding, cytokine; 1.53A {Homo sapiens} SCOP: b.42.1.2 PDB: 1iob_A 1itb_A 2i1b_A 2kh2_A 1i1b_A 4i1b_A 5i1b_A 6i1b_A 7i1b_A 9ilb_A 4dep_A* 3o4o_A* 1twm_A 1twe_A 1s0l_A 1too_A 1t4q_A 41bi_A 21bi_A 1hib_A ...
Probab=26.63 E-value=29 Score=33.63 Aligned_cols=30 Identities=10% Similarity=0.162 Sum_probs=23.2
Q ss_pred CeEEEeecCCCCeEEEeccccCCCceEEEeec
Q 043003 768 DTVSLESVSRKGCFVFSDVNLKAGTALKLNCQ 799 (855)
Q Consensus 768 ~~vsles~~~pg~~~~~~~~~~~g~~~~~~~~ 799 (855)
.+.+|||+.+||||+-.. ...++-|.+...
T Consensus 108 ~~~~fESaa~PgWFI~Ts--~~~~qPV~Lt~~ 137 (153)
T 2nvh_A 108 NKLEFESAQFPNWYISTS--QAENMPVFLGGT 137 (153)
T ss_dssp TEEEEEESSSTTCEEEBC--SSTTEECEEESC
T ss_pred CeeEEEeccCCCcEEecC--CCCCeEEEeecC
Confidence 699999999999999742 234667888654
No 69
>2ila_A Interleukin-1 alpha; cytokine; 2.30A {Homo sapiens} SCOP: b.42.1.2 PDB: 2kki_A 2l5x_A
Probab=25.84 E-value=28 Score=33.82 Aligned_cols=27 Identities=15% Similarity=0.079 Sum_probs=21.4
Q ss_pred CeEEEeecCCCCeEEEeccccCCCceEEEee
Q 043003 768 DTVSLESVSRKGCFVFSDVNLKAGTALKLNC 798 (855)
Q Consensus 768 ~~vsles~~~pg~~~~~~~~~~~g~~~~~~~ 798 (855)
.+.+|||+.+||||+-. . .++.|.+..
T Consensus 114 ~~~~FESaa~PgWFI~T-s---~~qPV~Lt~ 140 (155)
T 2ila_A 114 TKNYFTSVAHPNLFIAT-K---QDYWVCLAG 140 (155)
T ss_pred CeeEEEeccCCCcEEEc-C---CCCCeEeec
Confidence 58999999999999975 2 166777764
No 70
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=24.88 E-value=1.2e+02 Score=33.83 Aligned_cols=97 Identities=14% Similarity=0.048 Sum_probs=55.7
Q ss_pred hhhHHHHHHHHHHHhCC---------ChHHHHHHHHHHHHHHHHHhhCC-CcccccCCch-hhhhhh-cccccccc-chh
Q 043003 168 FLGHYLSATAMAWASTR---------NETVKQKMDAVMSVLSECQKKIG-TGYLSAFPSE-FFDRLE-NLVYVWAP-YYT 234 (855)
Q Consensus 168 ~~Gh~LsA~A~~~a~t~---------D~~L~~k~d~~Vd~L~~~Q~~~~-DGYL~a~~~~-~~~r~~-~l~~~w~p-yy~ 234 (855)
.+++-|+.++.+..... +.+....+++-|+.|.++|+ + ||-+-..-.. ....|. .....++| -.+
T Consensus 214 vt~rvle~L~~~~~~~~~~~~~~~~~~~~~~~av~Rgi~~Ll~~Qe--~~dGsw~rWg~qY~ygT~~Pa~aRsYE~psLs 291 (408)
T 1r76_A 214 ALVHVAELLSDIAAGRDGFGFVPPAIRTRALEATNAAIHCIVETQV--VQDGKRLGWGQQHDALTLRPTSARNFEPAALS 291 (408)
T ss_dssp HHHHHHHHHHHHHHTCTTCTTSCHHHHHHHHHHHHHHHHHHHHHSC--EETTEECCCCSEECTTTCSBCCCSTTCCSCEE
T ss_pred HHHHHHHHHHHHHhccCcccccchhhhhhHHHHHHHHHHHHHHhhc--ccCCcccchhcccccccCcchhhhccCCcccc
Confidence 37999999999977434 24667788899999999999 6 6644321100 000010 00011111 112
Q ss_pred hHH---HHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Q 043003 235 IHK---IMAGLLDQYTLANNGQALNITIWMADYFNTR 268 (855)
Q Consensus 235 ~Hk---I~aGLld~Y~~TG~~kaL~ia~r~AD~~~~r 268 (855)
++- |+.+|++.+ .++++.++.+.+.++|+.+.
T Consensus 292 ~~esa~il~~LM~~~--~~~~~~~~aI~~Av~WL~s~ 326 (408)
T 1r76_A 292 STESARILLFLMEIE--APSDAVKQAIRGGVAWLNTS 326 (408)
T ss_dssp HHHHHHHHHHHTTSS--SCCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHccCC--CCCHHHHHHHHHHHHHHHHh
Confidence 211 222233332 36678999999999999863
No 71
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=24.49 E-value=1.8e+02 Score=27.27 Aligned_cols=38 Identities=5% Similarity=0.137 Sum_probs=26.5
Q ss_pred eEEEEEEeCCCCCeeeEEEEeec-CCcCCCCceEEECCccc
Q 043003 538 RMALTFTSNKGPGVSSVLNLRIP-FWANPNGGKATLNKDNL 577 (855)
Q Consensus 538 ~V~ltV~~~~~~~~~ftL~LRIP-~Wa~~~~~~i~VNG~~~ 577 (855)
.|+++|+.. ++...+|.+|+- +........|.|||+.+
T Consensus 40 ~v~~~V~v~--~aG~Y~l~~ryang~~~~r~~~l~VNG~~~ 78 (145)
T 2w3j_A 40 SIVWSLSAA--SAKTYTAQIRFGNGGTSARRATVVVNDSQI 78 (145)
T ss_dssp EEEEEEEES--SCEEEEEEEEEECCSSSCCCEEEEETTEEE
T ss_pred EEEEEEECC--CCeEEEEEEEEECCCCCCeEEEEEECCeEe
Confidence 577777763 356788888886 34322357999999875
No 72
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=23.90 E-value=1.5e+02 Score=34.26 Aligned_cols=76 Identities=13% Similarity=0.107 Sum_probs=49.2
Q ss_pred HHHHHHHHhCC------hHHHHHHHHHHHHhcccCeEeecCCCCCCCCCCCccccccCCcCccccchhhHHHHHHHHHHc
Q 043003 345 GVQNRYELTGD------EQSMAMGTFFMDIINSSHSYATGGTSHQEFWTDPKRIATALSAETEESCTTYNMLKVSRYLFK 418 (855)
Q Consensus 345 G~a~~Y~~TGD------~~y~~aa~~fwd~V~~~~~Y~TGG~g~~E~f~~~~~l~~~l~~~~~ETCat~nmlkl~~~Lf~ 418 (855)
.+|..+++-++ ++++++|+..|+...++..-. +..+... ....|+.+.-.=+++.-+-.||+
T Consensus 251 alA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~~~~~~---------~~~~~~~---~~~~Y~~~~~~Del~wAA~~Ly~ 318 (537)
T 3gzk_A 251 AMAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQP---------FHNPDGI---LTGEYGDAELRDELLWASCALLR 318 (537)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTSCCCC---------CCCCTTC---CSCCCCCSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhccccc---------ccCCccc---ccCCcCCCccchHHHHHHHHHHH
Confidence 45566777776 688999999999987654311 1111000 01223334444456777888999
Q ss_pred cCCcchHHHHHHHH
Q 043003 419 WTKQVTYADYYERA 432 (855)
Q Consensus 419 ~tgd~~YaD~~ERa 432 (855)
.|+|.+|.++++..
T Consensus 319 aTgd~~Yl~~a~~~ 332 (537)
T 3gzk_A 319 MTGDSAWARVCEPL 332 (537)
T ss_dssp HHCCGGGHHHHHHH
T ss_pred HhCCHHHHHHHHHh
Confidence 99999999999874
No 73
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=23.58 E-value=2.3e+02 Score=26.13 Aligned_cols=38 Identities=13% Similarity=0.045 Sum_probs=23.4
Q ss_pred eEEEEEEeCCCCCeeeEEEEeecC-CcCCCCceEEECCccc
Q 043003 538 RMALTFTSNKGPGVSSVLNLRIPF-WANPNGGKATLNKDNL 577 (855)
Q Consensus 538 ~V~ltV~~~~~~~~~ftL~LRIP~-Wa~~~~~~i~VNG~~~ 577 (855)
.|+++|+.. ++...+|.+|.=. -.......|.|||+.+
T Consensus 41 ~v~~~V~v~--~aG~Y~l~~ryan~~~~~~~~~l~VNG~~~ 79 (144)
T 2w47_A 41 YIEWNVNAP--SSGSYALIFRYANGTTANRPMRITVNGNIV 79 (144)
T ss_dssp EEEEEEEES--SSEEEEEEEEEECCSSSCCCEEEEETTEEE
T ss_pred EEEEEEECC--CCcEEEEEEEEECCCCCCeEEEEEECCeEe
Confidence 566777653 3556777777622 1111257899999863
No 74
>3ltq_A Interleukin-1 beta; lanthanide binding TAG, LBT, terbium, IL1B, cytokine, inflam response, mitogen, pyrogen, secreted; 2.10A {Homo sapiens} SCOP: b.42.1.2
Probab=22.35 E-value=56 Score=32.20 Aligned_cols=29 Identities=10% Similarity=0.172 Sum_probs=22.3
Q ss_pred CeEEEeecCCCCeEEEeccccCCCceEEEee
Q 043003 768 DTVSLESVSRKGCFVFSDVNLKAGTALKLNC 798 (855)
Q Consensus 768 ~~vsles~~~pg~~~~~~~~~~~g~~~~~~~ 798 (855)
.+.+|||+.+||+|+-. ....++.|.+..
T Consensus 126 s~stFESaa~PGWFI~T--s~~~~qPV~Lt~ 154 (171)
T 3ltq_A 126 NKLEFESAQFPNWYIST--SQAENMPVFLGG 154 (171)
T ss_dssp TEEEEEESSSTTCEEEB--CSSTTEECEEEC
T ss_pred CceEEEecCCCCCEEee--cCCCCeeEEeeC
Confidence 47899999999999974 233566777765
Done!