BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043004
(295 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q86JM5|Y2012_DICDI Putative elongation of fatty acids protein DDB_G0272012
OS=Dictyostelium discoideum GN=DDB_G0272012 PE=3 SV=1
Length = 296
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 16/213 (7%)
Query: 10 SEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRR-IPLGPIPA 68
SE VNF++ + S + L + IS Y+V +F L RNR+ L +
Sbjct: 31 SELFDPVNFKFKFGTTPFSQFQILPSVISLYLVI-----IFSIKFLMRNRKPFSLKYVSI 85
Query: 69 IHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGRVFFWS 128
+H+ + + S+V VGIL +R + +C + G ++WS
Sbjct: 86 LHNAILCIWSLVMCVGILYEVI----------KRITAEGPLFTVCETVSGFDKGPAYYWS 135
Query: 129 YVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLTTLL 188
Y+FY+S+F LL T +LK + L F +++ +++ + + ++ + Q+ + L T +
Sbjct: 136 YIFYISKFYELLDTVIIVLKKKPLIFLHVYHHCIVVWLCWYFMYSGWNLQLWVVFLNTFV 195
Query: 189 YSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVC 221
+ +Y + F T G ++ Q++ +C
Sbjct: 196 HVFMYYFYFQTGRGKTVWWKKYITMIQIIQFIC 228
>sp|Q9UTF7|ELOH1_SCHPO Putative elongation of fatty acids protein 1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC1B2.03c PE=1 SV=1
Length = 334
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 14/168 (8%)
Query: 129 YVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLTTLL 188
Y+ YL+++L L+ T F LK + L F ++ + + F L S Q I L +
Sbjct: 138 YLNYLTKYLELMDTVFLFLKKKPLAFLHCYHHGITALLCFTQLLGRTSVQWGVIGLNLYV 197
Query: 189 YSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLI-CHFGVL----------LLHVLKG 237
+ ++Y Y F A G +V Q++ V +LI C+FG L HV G
Sbjct: 198 HVIMYSYYFLAACGRRVWWKQWVTRVQIIQFVLDLILCYFGTYSHIAFRYFPWLPHV--G 255
Query: 238 GCNG-IGAWTFNSVLNAVILLLFMNFYVKMYLRNKKIGDASSAAEQSN 284
C+G + A F + + L LF+ FY+ Y++ + AA +++
Sbjct: 256 DCSGSLFAAFFGCGVLSSYLFLFIGFYINTYIKRGAKKNQRKAAGKAD 303
>sp|P25358|ELO2_YEAST Elongation of fatty acids protein 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=FEN1 PE=1 SV=1
Length = 347
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 129 YVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLTTLL 188
Y+ Y+ +F+ + TFF +LKH+KLTF ++ + + L + S V I L +
Sbjct: 151 YMNYIVKFIEFIDTFFLVLKHKKLTFLHTYHHGATALLCYTQLMGTTSISWVPISLNLGV 210
Query: 189 YSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNL-ICHFGV------LLLHVLK--GGC 239
+ V+Y Y F A G+ +V Q++ V ++ +F V L +L G C
Sbjct: 211 HVVMYWYYFLAARGIRVWWKEWVTRFQIIQFVLDIGFIYFAVYQKAVHLYFPILPHCGDC 270
Query: 240 NGIGAWTF-NSVLNAVILLLFMNFYVKMYLRNKKIGDASSAAEQSNGG 286
G TF + + L+LF++FY+ +Y R K S ++++GG
Sbjct: 271 VGSTTATFAGCAIISSYLVLFISFYINVYKR--KGTKTSRVVKRAHGG 316
>sp|Q54CJ4|ELOA_DICDI Elongation of fatty acids protein A OS=Dictyostelium discoideum
GN=eloA PE=2 SV=1
Length = 271
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 119/267 (44%), Gaps = 26/267 (9%)
Query: 9 LSEHP--TVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRRIPLGPI 66
S+ P T+ FRW N + S + LF + ++ A L L + + + I L
Sbjct: 12 FSKDPIGTIDRFRWKNEVTPFS--NILFPIVCSFGYLA--LIYGLQIFMKNKKEIKLHGF 67
Query: 67 PAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGRVFF 126
H+L + L+S++ F+GI++ A + + ++C P+ SG V F
Sbjct: 68 AMFHNLFLCLLSLLMFLGIVIPMA----------KYSFPHGLYNIICKPID---SGLVQF 114
Query: 127 WSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLTT 186
Y+FYLS+ + T +L+ + L F +++ + + + + L++ Q V I
Sbjct: 115 SYYIFYLSKVYEFIDTIIQVLRKKSLLFLHVWHHFITLWLVWANLKYDTGCQWVDISANC 174
Query: 187 LLYSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLICHFGVLLLHVLKGGCNG---IG 243
++ V+Y Y F T G+ + CQ++ + ++ H + +G N G
Sbjct: 175 FVHIVMYFYYFQTERGINPWWKKHITTCQIIQFIVDMSSHLA-WHFYDTQGNHNSNYCSG 233
Query: 244 AWTFNSVLNAVILL---LFMNFYVKMY 267
W ++ + VIL LF+ F+VK Y
Sbjct: 234 TWATSAFSDFVILSFLGLFIQFFVKAY 260
>sp|Q54TC9|SRE1_DICDI Elongation of fatty acids protein sre1 OS=Dictyostelium discoideum
GN=sre1 PE=2 SV=1
Length = 268
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 119/271 (43%), Gaps = 25/271 (9%)
Query: 17 NFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVF-LNLVLPRNRRIPLGPIPAIHSLAIT 75
NFRW + + S++ F F+ YV L +F L ++ + + L IH++ +
Sbjct: 17 NFRWESGVTPLSSYVFPFSTSVIYV-----LVIFALQAIMKNKKGMVLKGFSIIHNINLI 71
Query: 76 LISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGRVFFWSYVFYLSR 135
++S G++ + + E AF L+C GR+ FW Y+FYLS+
Sbjct: 72 ILSFSMMSGVMYAAYQQYLEQG---------AFS-LVCEQSSQSVQGRIGFWIYIFYLSK 121
Query: 136 FLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVA---ILLTTLLYSVV 192
+ L+ T LK + + F +F+ ++ +++ WL + V + L+ + ++ ++
Sbjct: 122 YYELVDTVILALKKKPIIFLHIFHHMAMVPVTWQWLH--DQWLVGSWWCTLVNSFIHVLM 179
Query: 193 YGYRFWTAIGLPSACFPFVVNCQVV-LLVCNLICHFGVLLLHVLKGGCNG-IGAWTFNSV 250
Y Y T +G P ++ Q+V L + + ++ K C + ++
Sbjct: 180 YYYYLQTTLGNPCWFKKYITKAQIVQFLTGTAMVSYWFVIRDSEK--CQAPLSPAIVSNT 237
Query: 251 LNAVILLLFMNFYVKMYLRNKKIGDASSAAE 281
+N+ ++LF FY Y N + + + E
Sbjct: 238 INSFFIILFGKFYYDSYKSNSRRQEKLNKVE 268
>sp|Q9JLJ4|ELOV2_MOUSE Elongation of very long chain fatty acids protein 2 OS=Mus musculus
GN=Elovl2 PE=2 SV=1
Length = 292
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 129/301 (42%), Gaps = 44/301 (14%)
Query: 2 MQNIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFL-HVFLNLVLPRNR- 59
M+ +K + +E ++ + S W L + + T+++ T+L ++L +NR
Sbjct: 1 MEQLKAFDNEVNAFLDNMFGPRDSRVRGWFLLDSYLPTFILTITYLLSIWLGNKYMKNRP 60
Query: 60 RIPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTR 119
+ L I +++LAITL+S V ++LS SW + Q L G
Sbjct: 61 ALSLRGILTLYNLAITLLSAYMLVELILS----------SWEGGYNLQCQNLDSAGEGDV 110
Query: 120 PSGRVFFWSYVFYLSRFLHLLRTFFSILKHR--KLTFFQLFNQSMLICM---SFLWLEFS 174
+V +W +Y S+ + L T F +L+ + ++TF +++ + + + W+
Sbjct: 111 RVAKVLWW---YYFSKLVEFLDTIFFVLRKKTNQITFLHVYHHASMFNIWWCVLNWIPCG 167
Query: 175 QSFQVVAILLTTLLYSVVYGYRFWTAIGLPSACFP----------FVVNCQVVLLVCNLI 224
QSF L + ++ ++Y Y GL + FP ++ Q+V V I
Sbjct: 168 QSF--FGPTLNSFIHILMYSY-----YGL--SVFPSMHKYLWWKKYLTQAQLVQFVLT-I 217
Query: 225 CHFGVLLLHVLKGGCNGIGAWTFNSVLNAVILLLFMNFYVKMYLRNKKIGDASSAAEQSN 284
H L V+K G F S +++LF+NFY++ Y R K + E N
Sbjct: 218 TH---TLSAVVKPCGFPFGCLIFQSSYMMTLVILFLNFYIQTY-RKKPVKKELQEKEVKN 273
Query: 285 G 285
G
Sbjct: 274 G 274
>sp|P39540|ELO1_YEAST Elongation of fatty acids protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ELO1 PE=1 SV=1
Length = 310
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 129 YVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLTTLL 188
Y+ Y+++F+ T +LKHRKLTF ++ + + L + V + L +
Sbjct: 145 YLNYMTKFVEFADTVLMVLKHRKLTFLHTYHHGATALLCYNQLVGYTAVTWVPVTLNLAV 204
Query: 189 YSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLICHFGVLLLHVL----KGGC----- 239
+ ++Y Y F +A G+ +V Q+V + +LI + VL ++ K C
Sbjct: 205 HVLMYWYYFLSASGIRVWWKAWVTRLQIVQFMLDLIVVYYVLYQKIVAAYFKNACTPQCE 264
Query: 240 NGIGAWTFNSVLNAVI---LLLFMNFYVKMYLRNKKIGDAS 277
+ +G+ T + A++ L LF++FY+++Y R G
Sbjct: 265 DCLGSMTAIAAGAAILTSYLFLFISFYIEVYKRGSASGKKK 305
>sp|Q555E8|Y4669_DICDI Putative elongation of fatty acids protein DDB_G0274669
OS=Dictyostelium discoideum GN=DDB_G0274669 PE=3 SV=1
Length = 251
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 16 VNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRR-IPLGPIPAIHSLAI 74
VN+++N + S + + + Y+V +F L +NR+ L I +H+ +
Sbjct: 37 VNYKFNFGVTPFSQFQIIPIVLVIYLVT-----IFSIKFLMKNRKPFSLKFISILHNAIL 91
Query: 75 TLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLC-FPLGTRPSGRVFFWSYVFYL 133
+ S++ VG+L +R + +C P G G ++WSY+FY+
Sbjct: 92 CIWSLIMCVGVLYEII----------KRVSNEGPLFTVCEDPNGGFDKGVTYYWSYIFYI 141
Query: 134 SRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVV 180
S+F LL T +LK + L F +++ C + W ++ Q++
Sbjct: 142 SKFYELLDTVIIVLKKKPLIFLHVYHH----CKTVWWKKYITMIQIL 184
>sp|P40319|ELO3_YEAST Elongation of fatty acids protein 3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SUR4 PE=1 SV=1
Length = 345
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 110 WLLCFPLGTRPSGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFL 169
W +C P + Y+ YL++F+ L+ T F +L+ +KL F ++ + +
Sbjct: 141 WSICSKEAFAPKLVTLY--YLNYLTKFVELIDTVFLVLRRKKLLFLHTYHHGATALLCYT 198
Query: 170 WLEFSQSFQVVAILLTTLLYSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLI-CHFG 228
L S + V ILL ++ ++Y Y F ++ G+ +V Q++ + +L+ +F
Sbjct: 199 QLIGRTSVEWVVILLNLGVHVIMYWYYFLSSCGIRVWWKQWVTRFQIIQFLIDLVFVYFA 258
Query: 229 VLLLHVL---------KGGCNGI-GAWTFNSVLNAVILLLFMNFYVKMY 267
+ KG C G A + ++ LLLF++FY++ Y
Sbjct: 259 TYTFYAHKYLDGILPNKGTCYGTQAAAAYGYLILTSYLLLFISFYIQSY 307
>sp|O35949|ELOV3_MOUSE Elongation of very long chain fatty acids protein 3 OS=Mus musculus
GN=Elovl3 PE=1 SV=1
Length = 271
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 105 TTAFQWLLCFPLGTRPSGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLI 164
T + +CF + T V FWS++F LS+ + L T F IL+ R L F ++ S ++
Sbjct: 96 TVGLKQTVCFAIYT-DDAVVRFWSFLFLLSKVVELGDTAFIILRKRPLIFVHWYHHSTVL 154
Query: 165 CMSFLWLEFSQSFQVVA----ILLTTLLYSVVYGYRFWTAIGL--PSACFPFVVNCQVVL 218
L+ F +V + + + ++SV+Y Y A L P+ + + Q++
Sbjct: 155 ----LFTSFGYKNKVPSGGWFMTMNFGVHSVMYTYYTMKAAKLKHPNLLPMVITSLQILQ 210
Query: 219 LVCNLICHFGVL-LLHVLKGGCNGIGA---WTFNSVLNAVILLLFMNFYVKMYLRNKKIG 274
+V I FG+L + + GC+ W+F +L +LF +F+ + YLR K G
Sbjct: 211 MVLGTI--FGILNYIWRQEKGCHTTTEHFFWSF--MLYGTYFILFAHFFHRAYLRPK--G 264
Query: 275 DASSAAE 281
+S ++
Sbjct: 265 KVASKSQ 271
>sp|Q9NXB9|ELOV2_HUMAN Elongation of very long chain fatty acids protein 2 OS=Homo sapiens
GN=ELOVL2 PE=2 SV=2
Length = 296
Score = 38.1 bits (87), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 126/304 (41%), Gaps = 46/304 (15%)
Query: 2 MQNIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFL-HVFLNLVLPRNR- 59
M+++K + E ++ + S W L + + T+ + +L ++L +NR
Sbjct: 1 MEHLKAFDDEINAFLDNMFGPRDSRVRGWFMLDSYLPTFFLTVMYLLSIWLGNKYMKNRP 60
Query: 60 RIPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTR 119
+ L I +++L ITL+S ++LST W + Q L
Sbjct: 61 ALSLRGILTLYNLGITLLSAYMLAELILST----------WEGGYNLQCQDLTSAGEADI 110
Query: 120 PSGRVFFWSYVFYLSRFLHLLRTFFSILKHR--KLTFFQLFNQSMLICM---SFLWLEFS 174
+V +W +Y S+ + L T F +L+ + ++TF +++ + + + W+
Sbjct: 111 RVAKVLWW---YYFSKSVEFLDTIFFVLRKKTSQITFLHVYHHASMFNIWWCVLNWIPCG 167
Query: 175 QSFQVVAILLTTLLYSVVYGYRFWTAIGLPSACFP----------FVVNCQVVLLVCNLI 224
QSF L + ++ ++Y Y GL + FP ++ Q+V V I
Sbjct: 168 QSF--FGPTLNSFIHILMYSY-----YGL--SVFPSMHKYLWWKKYLTQAQLVQFVLT-I 217
Query: 225 CHFGVLLLHVLKGGCNGIGAWTFNSVLNAVILLLFMNFYVKMYLR---NKKIGDASSAAE 281
H + V+K G F S +++LF+NFYV+ Y + K + + + E
Sbjct: 218 TH---TMSAVVKPCGFPFGCLIFQSSYMLTLVILFLNFYVQTYRKKPMKKDMQEPPAGKE 274
Query: 282 QSNG 285
NG
Sbjct: 275 VKNG 278
>sp|Q20303|ELO6_CAEEL Elongation of very long chain fatty acids protein 6
OS=Caenorhabditis elegans GN=elo-6 PE=1 SV=1
Length = 274
Score = 35.8 bits (81), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 4/172 (2%)
Query: 116 LGTRPSGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQ 175
+G +G ++++F LS+ T F IL+ + L F ++ + + +F+ E +
Sbjct: 101 IGDFYNGLSGMFTWLFVLSKVAEFGDTLFIILRKKPLMFLHWYHHVLTMNYAFMSFEANL 160
Query: 176 SFQVVAILLTTLLYSVVYGYRFWTAIG--LPSACFPFVVNCQVVLLVCNLICHFGVLLLH 233
F + ++S++YGY + G +P+ + Q++ V F V L
Sbjct: 161 GFNTWITWMNFSVHSIMYGYYMLRSFGVKVPAWIAKNITTMQILQFVITHFILFHVGYLA 220
Query: 234 VLKGGCNGI-GAWTFNSVLNAVILLLFMNFYVKMYLR-NKKIGDASSAAEQS 283
V + G + F ++ ++LF NFY + Y++ K +A E+
Sbjct: 221 VTGQSVDSTPGYYWFCLLMEISYVVLFGNFYYQSYIKGGGKKFNAEKKTEKK 272
>sp|Q03574|ELO4_CAEEL Putative fatty acid elongation protein 4 OS=Caenorhabditis elegans
GN=elo-4 PE=3 SV=1
Length = 291
Score = 35.8 bits (81), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Query: 88 STAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGRVFFWSYVFYLSRFLHLLRTFFSIL 147
S A +R + R + F LC+ P+ FWS+ F LS+ + L T F IL
Sbjct: 96 SIIATLRFSIDPLRSLYAEGFYKTLCY--SCNPTDVAAFWSFAFALSKIVELGDTMFIIL 153
Query: 148 KHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLTTLLYSVVYGYRFWTAIG 202
+ R L F ++ + ++ + + IL+ +S++Y Y +A+G
Sbjct: 154 RKRPLIFLHYYHHAAVLIYTVHSGAEHTAAGRFYILMNYFAHSLMYTYYTVSAMG 208
>sp|Q6PC64|ELOV6_DANRE Elongation of very long chain fatty acids protein 6 OS=Danio rerio
GN=elovl6 PE=2 SV=1
Length = 266
Score = 35.0 bits (79), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 126 FWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLT 185
FW+Y F LS+ L T F +L+ +KL F ++ ++ S W + +T
Sbjct: 109 FWAYAFVLSKAPELGDTLFIVLRKQKLIFLHWYHHITVLLYS--WYSYKDMVAGGGWFMT 166
Query: 186 T--LLYSVVYGYRFWTAIGLP-SACFP-FVVNCQVVLLVCNLICHFGVLLLHVLKGGC-N 240
L+++V+Y Y A G S F F+ Q+ +V + ++ V L C +
Sbjct: 167 MNYLVHAVMYSYYALRAAGFKISRKFAMFITLTQITQMVMGCVVNYLVYLWMQQGQECPS 226
Query: 241 GIGAWTFNSVLNAVILLLFMNFYVKMYLRNKKIGDASSAAEQSN 284
+ ++S++ +LF F+ + Y+ +K S+AA++S
Sbjct: 227 HVQNIVWSSLMYLSYFVLFCQFFFEAYITKRK----SNAAKKSQ 266
>sp|Q7LKX0|ELOH2_SCHPO Putative elongation of fatty acids protein 2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC1639.01c PE=3
SV=3
Length = 365
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%)
Query: 126 FWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLT 185
F Y Y+S+FL L TFF +L+ + L F ++ + + + S + I +
Sbjct: 152 FLYYCAYISKFLELTDTFFLVLRKKPLQFLHCYHHGATAVLVYTQIVGRTSISWLIIEIN 211
Query: 186 TLLYSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNL 223
L++ +Y Y + A G+ +V Q+V +L
Sbjct: 212 LLVHVTMYYYYYLVAKGIRVPWKKWVTRFQIVQFFADL 249
>sp|P49191|ELO3_CAEEL Putative fatty acid elongation protein 3 OS=Caenorhabditis elegans
GN=elo-3 PE=1 SV=2
Length = 320
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 82/203 (40%), Gaps = 18/203 (8%)
Query: 75 TLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGRVFFWSYVFYLS 134
+ +++ + +G L T E WSW +F++ +C + G FW+ F +S
Sbjct: 76 SFLAIFSILGFLRMTP----EFVWSWS-AEGNSFKYSICH--SSYAQGVTGFWTEQFAMS 128
Query: 135 RFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVA--ILLTTLLYSVV 192
+ L+ T F +L+ R L F ++ + M + W + I + +++++
Sbjct: 129 KLFELIDTIFIVLRKRPLIFLHWYHH--VTVMIYTWHAYKDHTASGRWFIWMNYGVHALM 186
Query: 193 YGYRFWTAIG--LPSACFPFVVNCQVVLLVCNLICHFGVLLLHVLKGGCNGIGAWTFNSV 250
Y Y ++ LP V Q+ +V +I GV + + G W +
Sbjct: 187 YSYYALRSLKFRLPKQMAMVVTTLQLAQMVMGVII--GVTVYRIKSSGEYCQQTWDNLGL 244
Query: 251 LNAV---ILLLFMNFYVKMYLRN 270
V LLF NF+ Y++
Sbjct: 245 CFGVYFTYFLLFANFFYHAYVKK 267
>sp|Q9HB03|ELOV3_HUMAN Elongation of very long chain fatty acids protein 3 OS=Homo sapiens
GN=ELOVL3 PE=1 SV=2
Length = 270
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 20/166 (12%)
Query: 124 VFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVA-- 181
V FWS+VF LS+ + L T F IL+ R L F ++ S ++ ++ F +V A
Sbjct: 113 VKFWSWVFLLSKVIELGDTAFIILRKRPLIFIHWYHHSTVL----VYTSFGYKNKVPAGG 168
Query: 182 --ILLTTLLYSVVYGYRFWTAIGL-PSACFPFVV-NCQVVLLVCNLICHFGVLLLHVLK- 236
+ + +++++Y Y A + P P ++ + Q++ + I +L ++ +
Sbjct: 169 WFVTMNFGVHAIMYTYYTLKAANVKPPKMLPMLITSLQILQMFVGAIVS---ILTYIWRQ 225
Query: 237 -GGCNGIGA---WTFNSVLNAVILLLFMNFYVKMYLRNKKIGDASS 278
GC+ W+F +L +LF +F+ + Y+R K S
Sbjct: 226 DQGCHTTMEHLFWSF--ILYMTYFILFAHFFCQTYIRPKVKAKTKS 269
>sp|Q32NI8|ELOV5_XENLA Elongation of very long chain fatty acids protein 5 OS=Xenopus
laevis GN=elovl5 PE=2 SV=1
Length = 295
Score = 32.0 bits (71), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 31/176 (17%)
Query: 123 RVFFWSYVFYLSRFLHLLRTFFSILK--HRKLTFFQLFNQ-SMLICMSFL--WLEFSQSF 177
RV +W +Y S+ + + TFF IL+ + ++T +++ SML F+ W+ SF
Sbjct: 111 RVLWW---YYFSKLIEFMDTFFFILRKNNHQITVLHVYHHASMLNIWWFVMNWVPCGHSF 167
Query: 178 QVVAILLTTLLYSVVYGYRFWTAIGLPSACFPF------VVNCQVVLLVCNLICHFGVLL 231
L + ++ ++Y Y +AI A P+ + CQ+ V + ++
Sbjct: 168 --FGATLNSFIHVLMYSYYGLSAI---PAIRPYLWWKKYITQCQLTQFVLTMTQTTCAMI 222
Query: 232 LHVLKGGCNGIGAWTF--NSVLNAVILLLFMNFYVKMYLRNKKIGDASSAAEQSNG 285
C W + NS + ++I+L F NFY+K Y NKK +S E NG
Sbjct: 223 W-----PCKFPMGWLYFQNSYMISLIIL-FTNFYLKTY--NKKT--SSRRKEYQNG 268
>sp|Q5M8U1|ELOV5_XENTR Elongation of very long chain fatty acids protein 5 OS=Xenopus
tropicalis GN=elovl5 PE=2 SV=1
Length = 295
Score = 31.6 bits (70), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 45/183 (24%)
Query: 123 RVFFWSYVFYLSRFLHLLRTFFSILK--HRKLTFFQLFNQ-SMLICMSFL--WLEFSQSF 177
RV +W +Y S+ + + TFF IL+ + ++T +++ SML F+ W+ S+
Sbjct: 111 RVLWW---YYFSKLIEFMDTFFFILRKNNHQITVLHVYHHASMLNIWWFVMNWVPCGHSY 167
Query: 178 QVVAILLTTLLYSVVYGYRFWTAIGLPSACFPF------VVNCQVVLLV-------CNLI 224
L + ++ ++Y Y +AI A P+ + CQ+ V C +I
Sbjct: 168 --FGATLNSFIHVLMYSYYGLSAI---PAMRPYLWWKKYITQCQLTQFVLTMTQTTCAMI 222
Query: 225 --CHFGVLLLHVLKGGCNGIGAWTFNSVLNAVILLLFMNFYVKMYLRNKKIGDASSAAEQ 282
C F + L+ F + +++LF NFY+K Y NKK +S E
Sbjct: 223 WPCKFPMGWLY-------------FQNCYMISLIILFGNFYIKTY--NKKT--SSRRKEY 265
Query: 283 SNG 285
NG
Sbjct: 266 QNG 268
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.140 0.464
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,710,611
Number of Sequences: 539616
Number of extensions: 3967800
Number of successful extensions: 10425
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 10371
Number of HSP's gapped (non-prelim): 61
length of query: 295
length of database: 191,569,459
effective HSP length: 117
effective length of query: 178
effective length of database: 128,434,387
effective search space: 22861320886
effective search space used: 22861320886
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 61 (28.1 bits)