Your job contains 1 sequence.
>043011
MGAPSNSRFRRPKAGEDERSPNLFVANCGPAVGVSYEAIGSVFSAFGDVKGIYAADDSGA
RVIVSYFDEGSAQAAFNSLHSRPCPDLANRFLHISYSVLEDSPATRHITSSVPVSLVASE
LNIPGLHSCFMTL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043011
(133 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2028631 - symbol:TRM9 "tRNA methyltransferase ... 337 1.4e-30 1
TAIR|locus:2182885 - symbol:ML4 "MEI2-like 4" species:370... 121 2.5e-06 1
TAIR|locus:2013583 - symbol:ML5 "MEI2-like protein 5" spe... 110 3.2e-05 1
TAIR|locus:2045605 - symbol:ML2 "MEI2-like 2" species:370... 105 0.00012 1
POMBASE|SPBC56F2.08c - symbol:SPBC56F2.08c "RNA-binding p... 100 0.00029 1
GENEDB_PFALCIPARUM|PF14_0194 - symbol:PF14_0194 "spliceos... 97 0.00041 1
UNIPROTKB|Q8ILQ0 - symbol:PF14_0194 "Spliceosome-associat... 97 0.00041 1
>TAIR|locus:2028631 [details] [associations]
symbol:TRM9 "tRNA methyltransferase 9" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0002098
"tRNA wobble uridine modification" evidence=IMP] InterPro:IPR000504
InterPro:IPR005123 InterPro:IPR012677 PROSITE:PS50102
PROSITE:PS51471 SMART:SM00360 EMBL:CP002684 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0016706 Pfam:PF13532
KO:K10770 GO:GO:0002098 EMBL:AY091033 EMBL:AY133725 IPI:IPI00522081
RefSeq:NP_174442.2 RefSeq:NP_973946.1 UniGene:At.18910
ProteinModelPortal:Q8RWY1 SMR:Q8RWY1 STRING:Q8RWY1
EnsemblPlants:AT1G31600.1 EnsemblPlants:AT1G31600.3 GeneID:840048
KEGG:ath:AT1G31600 TAIR:At1g31600 InParanoid:Q8RWY1 OMA:EFCYGTR
PhylomeDB:Q8RWY1 ProtClustDB:CLSN2680343 Genevestigator:Q8RWY1
Uniprot:Q8RWY1
Length = 431
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 68/113 (60%), Positives = 84/113 (74%)
Query: 14 AGEDERSPNLFVANCGPAVGVSYEAIGSVFSAFGDVKGIYAADDSGARVIVSYFDEGSAQ 73
+GE S NL+VANCGPAVG+++ AI +VF+ FG+V G+YAADDSG RVIVS+ D SA+
Sbjct: 103 SGEPNSS-NLYVANCGPAVGLTHNAIAAVFAEFGEVNGVYAADDSGVRVIVSFADPFSAK 161
Query: 74 AAFNSLHSRPCPDLANRFLHISYSVLEDSPATRHITSSVPVSLVASELNIPGL 126
AA +L RPCPDL R LHI YSVL+ P+ + VPVSL+ SELNIPGL
Sbjct: 162 AALEALSGRPCPDLKGRSLHIRYSVLQ-LPSETQVNDCVPVSLIDSELNIPGL 213
>TAIR|locus:2182885 [details] [associations]
symbol:ML4 "MEI2-like 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0045836 "positive regulation of meiosis" evidence=IMP]
[GO:0045927 "positive regulation of growth" evidence=IMP]
[GO:0048507 "meristem development" evidence=IGI] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0007126 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045927
GO:GO:0000166 Gene3D:3.30.70.330 EMBL:AL163652 GO:GO:0003723
eggNOG:NOG262869 HOGENOM:HOG000030212 ProtClustDB:CLSN2687061
GO:GO:0048507 GO:GO:0045836 InterPro:IPR007201 Pfam:PF04059
EMBL:AK226960 IPI:IPI00536095 PIR:T48500 RefSeq:NP_196346.1
UniGene:At.5054 ProteinModelPortal:Q9LYN7 SMR:Q9LYN7 PaxDb:Q9LYN7
PRIDE:Q9LYN7 EnsemblPlants:AT5G07290.1 GeneID:830620
KEGG:ath:AT5G07290 TAIR:At5g07290 InParanoid:Q9LYN7 OMA:HEDIRIT
PhylomeDB:Q9LYN7 Genevestigator:Q9LYN7 Uniprot:Q9LYN7
Length = 907
Score = 121 (47.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 34/108 (31%), Positives = 57/108 (52%)
Query: 23 LFVANCGPAVGVSYEAIGSVFSAFGDVKGIYAADDSGARVIVSYFDEGSAQAAFNSLHSR 82
LFV N ++ E +G +F FGDV+ ++ A + ++VSY+D +AQ A +LH R
Sbjct: 213 LFVRNVDSSIE-DCE-LGVLFKQFGDVRALHTAGKNRGFIMVSYYDIRAAQKAARALHGR 270
Query: 83 PCPDLANRFLHISYSVLEDSPATRHITSSVPVSLVASELNIPGLHSCF 130
L R L I YS+ +++P ++ V+ + S ++ LH F
Sbjct: 271 L---LRGRKLDIRYSIPKENPKENSSEGALWVNNLDSSISNEELHGIF 315
>TAIR|locus:2013583 [details] [associations]
symbol:ML5 "MEI2-like protein 5" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0045836 "positive regulation of meiosis"
evidence=IMP] [GO:0045927 "positive regulation of growth"
evidence=IMP] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:CP002684 GO:GO:0007126 GO:GO:0045927
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:NOG262869
HOGENOM:HOG000030212 GO:GO:0045836 InterPro:IPR007201 Pfam:PF04059
EMBL:AC068667 EMBL:AY062613 EMBL:AY070368 EMBL:AY091327
EMBL:AK230306 IPI:IPI00540335 PIR:F86416 RefSeq:NP_174233.2
RefSeq:NP_849727.1 UniGene:At.27439 HSSP:P19339
ProteinModelPortal:Q8VWF5 SMR:Q8VWF5 PaxDb:Q8VWF5 PRIDE:Q8VWF5
EnsemblPlants:AT1G29400.1 EnsemblPlants:AT1G29400.2 GeneID:839816
KEGG:ath:AT1G29400 TAIR:At1g29400 InParanoid:Q8VWF5 OMA:SPMANSP
PhylomeDB:Q8VWF5 ProtClustDB:CLSN2680301 Genevestigator:Q8VWF5
Uniprot:Q8VWF5
Length = 800
Score = 110 (43.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 32/112 (28%), Positives = 55/112 (49%)
Query: 20 SPNLFVANCGPAVGVSYEAIGSVFSAFGDVKGIYAADDSGARVIVSYFDEGSAQAAFNSL 79
S LFV N V S + ++F +GD++ +Y V++SY+D SA+ A SL
Sbjct: 167 SRTLFVRNINSNVEDS--ELTALFEQYGDIRTLYTTCKHRGFVMISYYDIRSARMAMRSL 224
Query: 80 HSRPCPDLANRFLHISYSVLEDSPATRHITSSVPVSL-VASELNIPGLHSCF 130
++P L R L I +S+ +D+P+ + + V + ++ LH F
Sbjct: 225 QNKP---LRRRKLDIHFSIPKDNPSEKDMNQGTLVVFNLDPSISNDDLHGIF 273
>TAIR|locus:2045605 [details] [associations]
symbol:ML2 "MEI2-like 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0045836 "positive regulation of meiosis" evidence=IMP]
[GO:0045927 "positive regulation of growth" evidence=IMP]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0007126 GO:GO:0045927 EMBL:CP002685
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 HOGENOM:HOG000030212
GO:GO:0045836 InterPro:IPR007201 Pfam:PF04059 EMBL:AF101056
EMBL:AC006580 EMBL:AC006931 EMBL:AF367316 EMBL:AY143940
IPI:IPI00546291 PIR:E84859 RefSeq:NP_565990.1 UniGene:At.25505
ProteinModelPortal:Q9SJG8 SMR:Q9SJG8 STRING:Q9SJG8 PaxDb:Q9SJG8
PRIDE:Q9SJG8 EnsemblPlants:AT2G42890.1 GeneID:818890
KEGG:ath:AT2G42890 TAIR:At2g42890 eggNOG:NOG266727
InParanoid:Q9ASS1 OMA:DANDHEQ PhylomeDB:Q9SJG8
ProtClustDB:CLSN2688901 Genevestigator:Q9SJG8 Uniprot:Q9SJG8
Length = 843
Score = 105 (42.0 bits), Expect = 0.00012, P = 0.00012
Identities = 28/95 (29%), Positives = 50/95 (52%)
Query: 20 SPNLFVANCGPAVGVSYEAIGSVFSAFGDVKGIYAADDSGARVIVSYFDEGSAQAAFNSL 79
S LFV N +V S + ++F FG+++ +Y A S V++SY+D +A AA +L
Sbjct: 197 SRTLFVRNINSSVEDS--ELSALFEPFGEIRSLYTACKSRGFVMISYYDIRAAHAAMRAL 254
Query: 80 HSRPCPDLANRFLHISYSVLEDSPATRHITSSVPV 114
+ L R L I +S+ +++P+ + + V
Sbjct: 255 QNTL---LRKRTLDIHFSIPKENPSEKDMNQGTLV 286
>POMBASE|SPBC56F2.08c [details] [associations]
symbol:SPBC56F2.08c "RNA-binding protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISO] [GO:0003729 "mRNA
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000504 InterPro:IPR001313 InterPro:IPR012677
InterPro:IPR016024 Pfam:PF00076 Pfam:PF00806 PROSITE:PS50102
PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025 SMART:SM00360
PomBase:SPBC56F2.08c GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000166 EMBL:CU329671
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0000288 eggNOG:COG5099
OrthoDB:EOG4MWCFG PIR:T40536 RefSeq:NP_596709.1
ProteinModelPortal:O60059 EnsemblFungi:SPBC56F2.08c.1
GeneID:2540913 KEGG:spo:SPBC56F2.08c NextBio:20802028
Uniprot:O60059
Length = 661
Score = 100 (40.3 bits), Expect = 0.00029, P = 0.00029
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 23 LFVANCGPAVGVSYEAIGSVFSAFGDVKGIYA-ADDSGARVIVSYFDEGSAQAAFNSLHS 81
L+V+N P VG S AI ++FSA+G+VK I+ + D+ A IVSY SA A ++LH+
Sbjct: 2 LYVSNL-P-VGTSSSAIHALFSAYGNVKDIWMLSPDNSA--IVSYESLSSAIVARDALHN 57
Query: 82 RP 83
RP
Sbjct: 58 RP 59
>GENEDB_PFALCIPARUM|PF14_0194 [details] [associations]
symbol:PF14_0194 "spliceosome-associated
protein, putative" species:5833 "Plasmodium falciparum" [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0008380 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003676 EMBL:AE014187
HSSP:P11940 KO:K12831 RefSeq:XP_001348367.1
ProteinModelPortal:Q8ILQ0 IntAct:Q8ILQ0 MINT:MINT-1577513
EnsemblProtists:PF14_0194:mRNA GeneID:811775 KEGG:pfa:PF14_0194
EuPathDB:PlasmoDB:PF3D7_1420000 ProtClustDB:CLSZ2501032
Uniprot:Q8ILQ0
Length = 484
Score = 97 (39.2 bits), Expect = 0.00041, P = 0.00041
Identities = 35/119 (29%), Positives = 59/119 (49%)
Query: 13 KAGEDERS----PNLFVANCGPAVGVSYEAIGSVFSAFGD---VKGIYAADD-SGARVIV 64
KA +D+RS NLF+ N V + + +FS+FG VK + DD S +
Sbjct: 95 KATQDKRSFDVGANLFIGNLDDEV--DEKMLFDIFSSFGQIMTVKVMRNEDDTSKGHGFI 152
Query: 65 SYFDEGSAQAAFNSLHSRPCPDLANRFLHISYSVLEDSPATRHITSSVPVSLVASELNI 123
SY + S+ A +++++ + N+ +HISY+ +DS RH T++ LN+
Sbjct: 153 SYDNFESSDLAIENMNNQ---FICNKKVHISYAFKKDSKGERHGTAAERFIAANKALNL 208
>UNIPROTKB|Q8ILQ0 [details] [associations]
symbol:PF14_0194 "Spliceosome-associated protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0008380 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0003676 EMBL:AE014187 HSSP:P11940 KO:K12831
RefSeq:XP_001348367.1 ProteinModelPortal:Q8ILQ0 IntAct:Q8ILQ0
MINT:MINT-1577513 EnsemblProtists:PF14_0194:mRNA GeneID:811775
KEGG:pfa:PF14_0194 EuPathDB:PlasmoDB:PF3D7_1420000
ProtClustDB:CLSZ2501032 Uniprot:Q8ILQ0
Length = 484
Score = 97 (39.2 bits), Expect = 0.00041, P = 0.00041
Identities = 35/119 (29%), Positives = 59/119 (49%)
Query: 13 KAGEDERS----PNLFVANCGPAVGVSYEAIGSVFSAFGD---VKGIYAADD-SGARVIV 64
KA +D+RS NLF+ N V + + +FS+FG VK + DD S +
Sbjct: 95 KATQDKRSFDVGANLFIGNLDDEV--DEKMLFDIFSSFGQIMTVKVMRNEDDTSKGHGFI 152
Query: 65 SYFDEGSAQAAFNSLHSRPCPDLANRFLHISYSVLEDSPATRHITSSVPVSLVASELNI 123
SY + S+ A +++++ + N+ +HISY+ +DS RH T++ LN+
Sbjct: 153 SYDNFESSDLAIENMNNQ---FICNKKVHISYAFKKDSKGERHGTAAERFIAANKALNL 208
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 133 133 0.00091 102 3 11 22 0.41 31
30 0.43 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 531 (57 KB)
Total size of DFA: 117 KB (2078 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.34u 0.14s 13.48t Elapsed: 00:00:00
Total cpu time: 13.34u 0.14s 13.48t Elapsed: 00:00:00
Start: Sat May 11 14:16:33 2013 End: Sat May 11 14:16:33 2013