BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>043014
MEEQQQGEQEPTTPTSPTSSSSSSYKWFIRIMSKRRTWVCLFVVVYAILLSSSWNFLKSI
LSWYNLQSHQNPSSGWPALYASVLLGAVFGLLSMVAALAVAVPATLVIWITVLVLLAFFG
KPRTSLVIEGRKITKEIIGFVFKILLKEGNAVAAVCAVLGYFALVRRNCGDLE

High Scoring Gene Products

Symbol, full name Information P value
AT1G03730 protein from Arabidopsis thaliana 2.8e-41
AT4G03600 protein from Arabidopsis thaliana 4.3e-38
AT4G28330 protein from Arabidopsis thaliana 1.3e-36
AT4G28340 protein from Arabidopsis thaliana 1.7e-34

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  043014
        (173 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2020728 - symbol:AT1G03730 "AT1G03730" species...   438  2.8e-41   1
TAIR|locus:2140685 - symbol:AT4G03600 "AT4G03600" species...   408  4.3e-38   1
TAIR|locus:2121397 - symbol:AT4G28330 "AT4G28330" species...   394  1.3e-36   1
TAIR|locus:2121402 - symbol:AT4G28340 "AT4G28340" species...   374  1.7e-34   1


>TAIR|locus:2020728 [details] [associations]
            symbol:AT1G03730 "AT1G03730" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0009693 "ethylene biosynthetic process"
            evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR
            HOGENOM:HOG000070910 ProtClustDB:CLSN2685729 EMBL:BT025734
            IPI:IPI00542950 RefSeq:NP_563690.1 UniGene:At.42527
            UniGene:At.72752 EnsemblPlants:AT1G03730.1 GeneID:839106
            KEGG:ath:AT1G03730 TAIR:At1g03730 eggNOG:NOG278477
            InParanoid:Q1ECK0 OMA:ASVMYGA PhylomeDB:Q1ECK0
            Genevestigator:Q1ECK0 Uniprot:Q1ECK0
        Length = 167

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 89/145 (61%), Positives = 102/145 (70%)

Query:    25 YKWFIRIMSKRRTWVCLFVVVYAILLSSSWNFLKSILSWYNLQSHQNPS-SGWPALYASV 83
             Y  F+RIMSKRRTWVCLFV VYAILL+SSWNFL S+LSWY LQ   +PS S  PA+YASV
Sbjct:    19 YLIFMRIMSKRRTWVCLFVAVYAILLASSWNFLTSVLSWYKLQYTSSPSPSRLPAVYASV 78

Query:    84 LLGAVFGXXXXXXXXXXXXXXXXXXXXXXXXXXAFFGKPRTSLVIEGRKITKEIIGFVFK 143
             +LGAVFG                          AFFGK R  LV+E RKIT+E+ GFVFK
Sbjct:    79 VLGAVFGAMSMVAAAAVAVPAVMVIWISVVVLLAFFGKSRRVLVVEARKITREVFGFVFK 138

Query:   144 ILLKEGNAVAAVCAVLGYFALVRRN 168
             +LLKEGNAVAAVCAVLGYF L+R++
Sbjct:   139 VLLKEGNAVAAVCAVLGYFILIRKD 163


>TAIR|locus:2140685 [details] [associations]
            symbol:AT4G03600 "AT4G03600" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] [GO:0006661 "phosphatidylinositol biosynthetic
            process" evidence=RCA] EMBL:CP002687 EMBL:AC005142 EMBL:AL161497
            ProtClustDB:CLSN2685729 EMBL:DQ446797 IPI:IPI00519296 PIR:F85045
            RefSeq:NP_567259.1 UniGene:At.34150 PRIDE:Q9SY38
            EnsemblPlants:AT4G03600.1 GeneID:825660 KEGG:ath:AT4G03600
            TAIR:At4g03600 InParanoid:Q9SY38 OMA:ITREVVG PhylomeDB:Q9SY38
            ArrayExpress:Q9SY38 Genevestigator:Q9SY38 Uniprot:Q9SY38
        Length = 162

 Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
 Identities = 84/148 (56%), Positives = 101/148 (68%)

Query:    25 YKWFIRIMSKRRTWVCLFVVVYAILLSSSWNFLKSILSWYNLQ---SHQNPS-SGWPALY 80
             Y  FI IMSKRRTWVCLF+ VYAIL+SSSWN L+S+L+WY LQ   S+ + S S  PA+Y
Sbjct:    11 YHIFITIMSKRRTWVCLFIAVYAILVSSSWNLLRSVLNWYKLQYTSSNSDYSPSRLPAVY 70

Query:    81 ASVLLGAVFGXXXXXXXXXXXXXXXXXXXXXXXXXXAFFGKPRTSLVIEGRKITKEIIGF 140
             ASV+LGA+FG                          AFFGK R  LV+EGRKIT+E++GF
Sbjct:    71 ASVVLGAMFGAMSMVAAMTVAVPAVMVIWISVVVLLAFFGKSRRVLVVEGRKITREVVGF 130

Query:   141 VFKILLKEGNAVAAVCAVLGYFALVRRN 168
             VFK+LLKEGN VAA CAVL YF L+RR+
Sbjct:   131 VFKVLLKEGNVVAAFCAVLAYFLLIRRD 158


>TAIR|locus:2121397 [details] [associations]
            symbol:AT4G28330 "AT4G28330" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002687 HOGENOM:HOG000070910
            ProtClustDB:CLSN2685729 EMBL:BT010919 EMBL:BT011781 IPI:IPI00518372
            RefSeq:NP_194562.2 UniGene:At.32026 EnsemblPlants:AT4G28330.1
            GeneID:828948 KEGG:ath:AT4G28330 TAIR:At4g28330 InParanoid:Q6NM81
            OMA:RRTWACL PhylomeDB:Q6NM81 Genevestigator:Q6NM81 Uniprot:Q6NM81
        Length = 158

 Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 80/138 (57%), Positives = 95/138 (68%)

Query:    25 YKWFIRIMSKRRTWVCLFVVVYAILLSSSWNFLKSILSWYNLQSHQNPSSGWPALYASVL 84
             YK F+R++SKRRTW CLF+VVYAILLSSSWN L SI++WY  ++HQ  SSG PA+YASVL
Sbjct:    13 YKLFLRVISKRRTWACLFLVVYAILLSSSWNSLNSIVNWYG-ENHQT-SSGLPAIYASVL 70

Query:    85 LGAVFGXXXXXXXXXXXXXXXXXXXXXXXXXXAFFGKPRTSLVIEGRKITKEIIGFVFKI 144
             LGAVFG                          AF GK R  +VIEGRK+TKEI GFVF++
Sbjct:    71 LGAVFGVLSMAAALFIAVPAIVVIWISVVVTMAFAGKSRKRVVIEGRKVTKEIAGFVFRV 130

Query:   145 LLKEGNAVAAVCAVLGYF 162
             LLKEGN VA +CA+L YF
Sbjct:   131 LLKEGNFVALLCALLAYF 148


>TAIR|locus:2121402 [details] [associations]
            symbol:AT4G28340 "AT4G28340" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL021749
            EMBL:AL161572 EMBL:AY800637 EMBL:AY954861 IPI:IPI00540710
            PIR:A85330 RefSeq:NP_194563.1 UniGene:At.64199 UniGene:At.72776
            EnsemblPlants:AT4G28340.1 GeneID:828949 KEGG:ath:AT4G28340
            TAIR:At4g28340 eggNOG:NOG312703 HOGENOM:HOG000070910
            InParanoid:O49443 PhylomeDB:O49443 ProtClustDB:CLSN2685729
            Genevestigator:O49443 Uniprot:O49443
        Length = 159

 Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
 Identities = 78/138 (56%), Positives = 94/138 (68%)

Query:    25 YKWFIRIMSKRRTWVCLFVVVYAILLSSSWNFLKSILSWYNLQSHQNPSSGWPALYASVL 84
             YK F+R++SKRRTWVCLF+VVYA+LLSSS N L SI++WY  ++HQ  SSG PA+YASVL
Sbjct:    13 YKLFLRVISKRRTWVCLFLVVYAVLLSSSRNSLNSIVNWYG-ENHQT-SSGLPAIYASVL 70

Query:    85 LGAVFGXXXXXXXXXXXXXXXXXXXXXXXXXXAFFGKPRTSLVIEGRKITKEIIGFVFKI 144
             LGAVFG                          AF  K R  +VIEGRK+TKEI G+VFK+
Sbjct:    71 LGAVFGVLSMAAALFIAVPAIVVIWISVVVTIAFPVKSRKKVVIEGRKVTKEIAGYVFKV 130

Query:   145 LLKEGNAVAAVCAVLGYF 162
             LLKEGN VA +CAV+ YF
Sbjct:   131 LLKEGNFVALLCAVIAYF 148


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.329   0.141   0.456    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      173       124   0.00091  102 3  11 22  0.42    30
                                                     29  0.39    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  143 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.74u 0.16s 10.90t   Elapsed:  00:00:01
  Total cpu time:  10.74u 0.16s 10.90t   Elapsed:  00:00:01
  Start:  Sat May 11 14:17:24 2013   End:  Sat May 11 14:17:25 2013

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