Query 043014
Match_columns 173
No_of_seqs 19 out of 21
Neff 1.9
Searched_HMMs 13730
Date Mon Mar 25 21:00:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043014.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/043014hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2axtz1 f.17.5.1 (Z:1-62) Phot 12.2 92 0.0067 19.9 3.2 20 87-106 8-27 (62)
2 d2ejna2 a.101.1.1 (A:75-144) A 11.0 64 0.0047 21.0 2.1 25 41-65 5-29 (70)
3 d1mb3a_ c.23.1.1 (A:) Cell div 10.6 65 0.0047 20.1 2.0 21 122-142 1-21 (123)
4 d2axtl1 f.23.31.1 (L:1-37) Pho 10.0 96 0.007 18.2 2.5 15 38-52 19-33 (37)
5 d1u9pa1 a.43.1.1 (A:72-107) Ar 9.3 75 0.0055 18.5 1.8 28 123-150 8-35 (36)
6 d1i3ca_ c.23.1.1 (A:) Response 9.2 73 0.0053 20.7 1.9 19 121-139 2-20 (144)
7 d2b4aa1 c.23.1.1 (A:2-119) Hyp 9.0 86 0.0062 19.8 2.2 22 121-142 1-22 (118)
8 d1qrea_ b.81.1.5 (A:) gamma-ca 7.9 63 0.0046 22.4 1.2 21 2-22 3-23 (210)
9 d1qled_ f.23.8.1 (D:) Bacteria 7.9 1.3E+02 0.0094 18.0 2.5 14 37-50 25-38 (43)
10 d1cola_ f.1.1.1 (A:) Colicin A 7.9 1.6E+02 0.012 22.1 3.6 32 81-112 142-173 (197)
No 1
>d2axtz1 f.17.5.1 (Z:1-62) Photosystem II reaction center protein Z, PsbZ {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=12.20 E-value=92 Score=19.91 Aligned_cols=20 Identities=20% Similarity=0.404 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHhhhhHH
Q 043014 87 AVFGLLSMVAALAVAVPATL 106 (173)
Q Consensus 87 aVfG~Lsm~aal~vAvpA~m 106 (173)
+||.+..++-+|++++|.+.
T Consensus 8 ~v~ALi~~SF~lVVgVPV~~ 27 (62)
T d2axtz1 8 ALAALVILSFVMVIGVPVAY 27 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHheeceEEE
Confidence 68888899999999999653
No 2
>d2ejna2 a.101.1.1 (A:75-144) Allergen Fel d I-B chain {Cat (Felis catus) [TaxId: 9685]}
Probab=10.98 E-value=64 Score=21.03 Aligned_cols=25 Identities=20% Similarity=0.189 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHh
Q 043014 41 LFVVVYAILLSSSWNFLKSILSWYN 65 (173)
Q Consensus 41 LF~~VYa~Ll~sswn~l~svl~Wy~ 65 (173)
-|.-+|+.+++.|.-+|.+-++=+|
T Consensus 5 ~Ff~~y~~vlsG~r~~L~~~L~~fn 29 (70)
T d2ejna2 5 IFYDVFFAVANGNELLLDLSLTKVN 29 (70)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred hHHHHHHHHHhhhHHHHHHHHHHhc
Confidence 4788888888888888877666544
No 3
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}
Probab=10.62 E-value=65 Score=20.10 Aligned_cols=21 Identities=10% Similarity=0.352 Sum_probs=16.2
Q ss_pred CcceehhhhhhHHHHHHHHHH
Q 043014 122 PRTSLVIEGRKITKEIIGFVF 142 (173)
Q Consensus 122 ~Rr~LV~eGrkIT~dI~~~v~ 142 (173)
.||+|++|......++..-.+
T Consensus 1 tkrILiVDD~~~~~~~l~~~L 21 (123)
T d1mb3a_ 1 TKKVLIVEDNELNMKLFHDLL 21 (123)
T ss_dssp CCEEEEECSCHHHHHHHHHHH
T ss_pred CceEEEEECCHHHHHHHHHHH
Confidence 489999999988887655443
No 4
>d2axtl1 f.23.31.1 (L:1-37) Photosystem II reaction center protein L, PsbL {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=9.97 E-value=96 Score=18.21 Aligned_cols=15 Identities=40% Similarity=0.543 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHh
Q 043014 38 WVCLFVVVYAILLSS 52 (173)
Q Consensus 38 WvcLF~~VYa~Ll~s 52 (173)
|-.|++.|-++|++|
T Consensus 19 ~GlLlifvl~vLFss 33 (37)
T d2axtl1 19 LGLLLILVLALLFSS 33 (37)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 778888999998876
No 5
>d1u9pa1 a.43.1.1 (A:72-107) Arc repressor {Salmonella bacteriophage P22 [TaxId: 10754]}
Probab=9.33 E-value=75 Score=18.54 Aligned_cols=28 Identities=32% Similarity=0.414 Sum_probs=24.1
Q ss_pred cceehhhhhhHHHHHHHHHHHHHHhcCc
Q 043014 123 RTSLVIEGRKITKEIIGFVFKILLKEGN 150 (173)
Q Consensus 123 Rr~LV~eGrkIT~dI~~~v~kvLlkEgN 150 (173)
|++--..||....+|-.-++.-+-|||.
T Consensus 8 rkvaeeng~s~ns~iy~~vmes~kkegr 35 (36)
T d1u9pa1 8 RKVAEENGRSVNSEIYQRVMESFKKEGR 35 (36)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCcchhHHHHHHHHHHHHHccC
Confidence 5555667999999999999999999996
No 6
>d1i3ca_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]}
Probab=9.18 E-value=73 Score=20.67 Aligned_cols=19 Identities=21% Similarity=0.494 Sum_probs=14.1
Q ss_pred CCcceehhhhhhHHHHHHH
Q 043014 121 KPRTSLVIEGRKITKEIIG 139 (173)
Q Consensus 121 K~Rr~LV~eGrkIT~dI~~ 139 (173)
.|||+|++|--....++..
T Consensus 2 ppk~ILiVdD~~~~~~~l~ 20 (144)
T d1i3ca_ 2 PPKVILLVEDSKADSRLVQ 20 (144)
T ss_dssp CCEEEEEECCCHHHHHHHH
T ss_pred CCCEEEEEECCHHHHHHHH
Confidence 4899999998776655543
No 7
>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}
Probab=9.01 E-value=86 Score=19.83 Aligned_cols=22 Identities=14% Similarity=0.306 Sum_probs=16.5
Q ss_pred CCcceehhhhhhHHHHHHHHHH
Q 043014 121 KPRTSLVIEGRKITKEIIGFVF 142 (173)
Q Consensus 121 K~Rr~LV~eGrkIT~dI~~~v~ 142 (173)
+|.|+||+|-.....+.....+
T Consensus 1 qp~rILvVdDd~~~~~~l~~~L 22 (118)
T d2b4aa1 1 QPFRVTLVEDEPSHATLIQYHL 22 (118)
T ss_dssp CCCEEEEECSCHHHHHHHHHHH
T ss_pred CCCEEEEEECCHHHHHHHHHHH
Confidence 6889999999887776654433
No 8
>d1qrea_ b.81.1.5 (A:) gamma-carbonic anhydrase {Archaeon Methanosarcina thermophila [TaxId: 2210]}
Probab=7.95 E-value=63 Score=22.44 Aligned_cols=21 Identities=29% Similarity=0.474 Sum_probs=14.5
Q ss_pred hhcccccCCCCCCCCCCCCCC
Q 043014 2 EEQQQGEQEPTTPTSPTSSSS 22 (173)
Q Consensus 2 ~~q~~~~q~~~~~~~~~~~~p 22 (173)
||-++.-.+|.+||.+....|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~p 23 (210)
T d1qrea_ 3 DEFSNIRENPVTPWNPEPSAP 23 (210)
T ss_dssp CCCCSEECCCCBTTBSSCCCC
T ss_pred ccccccccCCCCCCCCCCCCC
Confidence 566666667788887766655
No 9
>d1qled_ f.23.8.1 (D:) Bacterial aa3 type cytochrome c oxidase subunit IV {Paracoccus denitrificans [TaxId: 266]}
Probab=7.89 E-value=1.3e+02 Score=18.04 Aligned_cols=14 Identities=29% Similarity=0.809 Sum_probs=7.3
Q ss_pred hHHHHHHHHHHHHH
Q 043014 37 TWVCLFVVVYAILL 50 (173)
Q Consensus 37 TWvcLF~~VYa~Ll 50 (173)
||.|..+++..++|
T Consensus 25 t~~~i~~i~~lifl 38 (43)
T d1qled_ 25 TWVSILSIAVLVFL 38 (43)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 45555555555444
No 10
>d1cola_ f.1.1.1 (A:) Colicin A {Escherichia coli [TaxId: 562]}
Probab=7.85 E-value=1.6e+02 Score=22.14 Aligned_cols=32 Identities=28% Similarity=0.213 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 043014 81 ASVLLGAVFGLLSMVAALAVAVPATLVIWITV 112 (173)
Q Consensus 81 ASvllGaVfG~Lsm~aal~vAvpA~mVtWITV 112 (173)
||.+...+|++..-.-++.+..|++.+.-+.+
T Consensus 142 At~va~~~fs~~~~~~~~~~g~~~~~iGI~g~ 173 (197)
T d1cola_ 142 ASSVALGIFSATLGAYALSLGVPAIAVGIAGI 173 (197)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHccccccHHHHHHH
Confidence 34444456666665666777778777654444
Done!