Your job contains 1 sequence.
>043016
MKEANRKKKKKRSRAAKPAPNNSSRDSNKPTATDGEEVQNDTKNQIIHSLTEAFGSVSLE
EATSAFCEANGDVNKAEELLTALTEGNSEDPLTSSSVSGGSSSLDSGSSSGSWLGFGETS
CVQNPVDYGNKKGGSRQKRVVAVSGMVANMLGKDYVRASPRKSGRFKGVGDDQSGFDKEE
MEQFLYSMLGDECQFSMAVVRDVLCQCGYNVEKAMDVLLDLSAPSNERSMNDDDDFTFKE
DRRFITEHTDNFTDRASDCTSYSSESDLYDSIWSTGYNYRNNSKVLIGSEVPSPLKASDQ
SDLPQKVLESLFNISKSPQHEPTTMNWRNVVKKLQALGPRFDVSHSSSTEHQQELCAKGD
EYQVFRKDAKQHWNSMKSCYQKASAAYSKGEWGYAAHLSEQGKSLTKLAQKADEKASHDI
FKARNKSFENVITIDLHGQHVKPAMKLLKLHLVMVSYAQSVQTLRVITGCGSHGVGKSKL
KQSVIELVENEGLHWSEENRGTVLIKLDGFR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043016
(511 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2178878 - symbol:AT5G58720 "AT5G58720" species... 1051 3.1e-106 1
TAIR|locus:2090181 - symbol:SDE5 "AT3G15390" species:3702... 257 3.7e-25 3
DICTYBASE|DDB_G0288821 - symbol:DDB_G0288821 "K homology ... 191 1.6e-12 1
CGD|CAL0006270 - symbol:orf19.2246 species:5476 "Candida ... 175 2.7e-11 1
UNIPROTKB|Q59Z54 - symbol:CaO19.2246 "Putative uncharacte... 175 2.7e-11 1
UNIPROTKB|E2R8V6 - symbol:N4BP2 "Uncharacterized protein"... 156 8.4e-11 2
DICTYBASE|DDB_G0268232 - symbol:DDB_G0268232 "ubiquitin s... 175 9.7e-11 3
UNIPROTKB|Q86UW6 - symbol:N4BP2 "NEDD4-binding protein 2"... 153 7.7e-10 3
SGD|S000006120 - symbol:YPL199C "Putative protein of unkn... 161 1.0e-09 1
UNIPROTKB|E1BIJ5 - symbol:N4BP2 "Uncharacterized protein"... 159 1.4e-09 3
RGD|1565738 - symbol:N4bp2 "NEDD4 binding protein 2" spec... 164 1.9e-09 2
UNIPROTKB|F1S4H4 - symbol:N4BP2 "Uncharacterized protein"... 157 2.4e-08 2
POMBASE|SPAC11H11.03c - symbol:SPAC11H11.03c "SMR and DUF... 145 2.4e-08 1
ZFIN|ZDB-GENE-061103-451 - symbol:n4bp2 "NEDD4 binding pr... 156 3.6e-08 2
FB|FBgn0027532 - symbol:CG7139 species:7227 "Drosophila m... 159 4.2e-07 2
TAIR|locus:2057775 - symbol:CID7 "AT2G26280" species:3702... 145 9.8e-07 1
DICTYBASE|DDB_G0286103 - symbol:DDB_G0286103 "small MutS ... 111 9.9e-05 1
>TAIR|locus:2178878 [details] [associations]
symbol:AT5G58720 "AT5G58720" species:3702 "Arabidopsis
thaliana" [GO:0003684 "damaged DNA binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0006298
"mismatch repair" evidence=ISS] [GO:0000956 "nuclear-transcribed
mRNA catabolic process" evidence=RCA] Pfam:PF01713
INTERPRO:IPR002625 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AB020755 UniGene:At.49190 UniGene:At.7874 SMART:SM00463
PROSITE:PS50828 InterPro:IPR013899 Pfam:PF08590 EMBL:AY062752
EMBL:AY114674 EMBL:AJ006021 IPI:IPI00540523 PIR:T51367
RefSeq:NP_200680.1 ProteinModelPortal:O65573 SMR:O65573
IntAct:O65573 PRIDE:O65573 EnsemblPlants:AT5G58720.1 GeneID:835986
KEGG:ath:AT5G58720 TAIR:At5g58720 HOGENOM:HOG000064626
InParanoid:O65573 OMA:DCELSMA PhylomeDB:O65573
ProtClustDB:CLSN2686279 ArrayExpress:O65573 Genevestigator:O65573
Uniprot:O65573
Length = 519
Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
Identities = 237/506 (46%), Positives = 322/506 (63%)
Query: 18 PAPNNSSRDSNKPTAT----DGE---EVQNDTKNQIIHSLTEAFGSVSLEEATSAFCEAN 70
P+ + ++ D NK DGE E++N KN I SL EAF SVS+EEA +A+ EA
Sbjct: 19 PSGDGTTSDGNKKDVEEERKDGEGKREIENVGKN-FIESLMEAFCSVSMEEAMAAYKEAG 77
Query: 71 GDVNKAEELLTALTEGNSEDPLTXXXXXXXXXXXXXXXXXXXWLGFGETSCVQNPVDYGN 130
GD+NKA E+L+ L E + +DP T G G +S +
Sbjct: 78 GDLNKAAEILSDLVE-SGDDPSTSSVASGSSGQETASTSEY---GAGSSSSCSEDLTRDR 133
Query: 131 KKGGSRQKRVVAVSGMVANMLGKDYVRASP-RKS----GRFKGV-GDDQSGFDKEEMEQF 184
GS+Q RV+A +GMV++++ KDY++ +P RK R K + G+ + D+E+ EQF
Sbjct: 134 WFKGSKQSRVIAATGMVSSVIAKDYLKPNPVRKEFPMMERSKELCGNGKKAADREKAEQF 193
Query: 185 LYSMLGDECQFSMAVVRDVLCQCGYNVEKAMDVLLDLSAPSNERSMNDDDDFTFKEDRRF 244
L SMLGD+C+ SMAVVRDVLCQCGY+V+ A++VLLD+S+ S + S++ + F
Sbjct: 194 LSSMLGDDCELSMAVVRDVLCQCGYDVDMALNVLLDMSSSSTDDSLSG---------KCF 244
Query: 245 ITEHTDNFTDRASDCTSYSSESDLYDSIWSTGYNYRNNSKVLIGSEVP-SPLKASDQSDL 303
+D+ + + D + S+ +L+ W Y+ R+ +K L+ S+ P + + D+ L
Sbjct: 245 GIGVSDSLAESSFDTDT--SDCELF---WGGDYSQRDYAKALMSSQDPFATTQGIDELGL 299
Query: 304 PQKVLESLFNISKSPQHEPTTMNWRNVVKKLQALGPRFDVSHSSSTEHQQELCAKGDEYQ 363
PQKVLESLFNI ++P+HE T +WRNV KK+Q+LG D S SS E K D Y
Sbjct: 300 PQKVLESLFNIRQNPKHESKTTSWRNVAKKMQSLG--IDASSSSGEEPHPNTFVKDDSYH 357
Query: 364 VFRKDAKQHWNSMKSCYQKASAAYSKGEWGYAAHLSEQGKSLTKLAQKADEKASHDIFKA 423
RK A WN KS YQKA+ AYSKG +AA+LS++G+ +K AQ+ADE+AS DIF A
Sbjct: 358 ELRKGANDQWNVTKSYYQKAAEAYSKGGRAHAAYLSDKGRVASKQAQRADERASQDIFVA 417
Query: 424 RNKSFENVITIDLHGQHVKPAMKLLKLHLVMVSYAQSVQTLRVITGCGSHGVGKSKLKQS 483
RNK ENV+TIDLHGQHVKPAMKLLKLHL+ SY S+QTLRVITGCG+ G GKSK+KQS
Sbjct: 418 RNKGIENVVTIDLHGQHVKPAMKLLKLHLLFGSYVPSIQTLRVITGCGASGFGKSKVKQS 477
Query: 484 VIELVENEGLHWSEENRGTVLIKLDG 509
V++L+E EG+ + EENRGT+LIKLDG
Sbjct: 478 VVKLLEREGVRYCEENRGTLLIKLDG 503
>TAIR|locus:2090181 [details] [associations]
symbol:SDE5 "AT3G15390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=TAS] EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0010267
EMBL:AB022218 InterPro:IPR013899 Pfam:PF08590 UniGene:At.11972
UniGene:At.49625 IPI:IPI00944282 RefSeq:NP_188158.4
ProteinModelPortal:Q9LUQ3 STRING:Q9LUQ3 EnsemblPlants:AT3G15390.1
GeneID:820778 KEGG:ath:AT3G15390 TAIR:At3g15390 eggNOG:NOG267526
HOGENOM:HOG000093041 OMA:ETEIWSE PhylomeDB:Q9LUQ3
ProtClustDB:CLSN2692979 Genevestigator:Q9LUQ3 Uniprot:Q9LUQ3
Length = 490
Score = 257 (95.5 bits), Expect = 3.7e-25, Sum P(3) = 3.7e-25
Identities = 93/340 (27%), Positives = 163/340 (47%)
Query: 180 EMEQFLYSMLGDECQFSMAVVRDVLCQCGYNVEKAMDVLLDLSAPSNERSMNDDDDFTFK 239
++E+F+ MLG+ Q S V+ VL CGY+V+K+ + LLD S + ++ K
Sbjct: 161 DVEEFIVKMLGEGFQASQEVIHQVLGVCGYDVKKSTEKLLDFSDTKKYADVGISNEVMSK 220
Query: 240 EDRRFITEHTDNFTDRASDCTSYSSESDLYDSIWS---TGYNYRNNSKVLIGSEVPSPLK 296
D + +++ C + + S+ + TG N+K + EV L
Sbjct: 221 VDPQ----------RQSTSCNQMELQK-ISQSVGARTFTGSQEGRNAKNGLEKEVLEALF 269
Query: 297 ASDQSDLPQKVLESLFNISKSPQHEPTTMNWRNVVKKLQ-ALGPRF-DVSHSSSTEHQQE 354
+ + + + + F + P R V K L+ R V SS+T + +
Sbjct: 270 SGAERYVDKPKVTRHFG-----ERRPGVAG-RPVFKPLEDPFQERVVAVKQSSNTSKEDD 323
Query: 355 LCAKGDEYQVFRKDAKQHWNSMKSCYQKASAAYSKGEWGYAAHLSEQGKSLTKLAQKADE 414
+E++ RK ++H N MK Y A+ A+SKGE A L E+G + A++AD+
Sbjct: 324 ---DENEFKAHRKAVREHLNQMKEYYGAAAEAFSKGETERAHRLVEKGHFFGQKAREADD 380
Query: 415 KASH---DIFKARNKSFEN--VITIDLHGQHVKPAMKLLKLHLVMVSYAQSVQTLRVITG 469
K+ D+ + + ++E V+T++++ K A++LLK L+ S S + LRV G
Sbjct: 381 KSVAKMIDVNQEDDSTYEEDEVVTVNMNEHEAKEALRLLKRQLIYFSGISSFKYLRVQLG 440
Query: 470 CGSHGVGKSKLKQSVIELVENEGLHWSEENRGTVL-IKLD 508
KSK K +++L+E E + W+EE+ G V+ I++D
Sbjct: 441 EKKEDF-KSKRKH-IVKLLEGESIPWTEEDGGLVIMIRVD 478
Score = 78 (32.5 bits), Expect = 3.7e-25, Sum P(3) = 3.7e-25
Identities = 16/47 (34%), Positives = 32/47 (68%)
Query: 40 NDTKNQIIHSLTEAFGS-VSLEEATSAFCEANGDVNKAEELLTALTE 85
+D ++ + L + FGS SL++ +A+C+A+ +V+ A E+L+A+ E
Sbjct: 10 SDPDSRSLQVLLDTFGSRFSLDDIAAAYCQASQNVDVAGEILSAMAE 56
Score = 52 (23.4 bits), Expect = 3.7e-25, Sum P(3) = 3.7e-25
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 136 RQKRVVAVSGMVANMLGKDYVRASP 160
R KR +G V++++GK+Y R P
Sbjct: 94 RPKRNSISNGTVSSVIGKEYARTRP 118
>DICTYBASE|DDB_G0288821 [details] [associations]
symbol:DDB_G0288821 "K homology (KH), type 1 domain
containing-protein" species:44689 "Dictyostelium discoideum"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF13014 PROSITE:PS50084
SMART:SM00322 dictyBase:DDB_G0288821 Pfam:PF01713
INTERPRO:IPR002625 GO:GO:0003723 EMBL:AAFI02000125 PROSITE:PS50828
InterPro:IPR013899 Pfam:PF08590 eggNOG:NOG266962 RefSeq:XP_636542.1
ProteinModelPortal:Q54ID5 PRIDE:Q54ID5 EnsemblProtists:DDB0232945
GeneID:8626827 KEGG:ddi:DDB_G0288821 InParanoid:Q54ID5 OMA:YFDMHGL
ProtClustDB:CLSZ2728827 Uniprot:Q54ID5
Length = 316
Score = 191 (72.3 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 54/169 (31%), Positives = 88/169 (52%)
Query: 342 DVSHSSSTEHQ--QELCAKGDEYQVFRKDAKQHWNSMKSCYQKASAAYSKGEWGYAAHLS 399
D+ EHQ +EL KG E +V R AK+ +++A A+ G+ L
Sbjct: 156 DMKDDHEKEHQRTEELYKKGQE-KVDRI-AKER----DDLHKQADKAFESGDKSLGHQLR 209
Query: 400 EQGKSLTKLAQKADEKASHDIFKARNKSFENVITIDLHGQHVKPAMKLLKLHLVMVSYAQ 459
EQ K+ T+ +KA ++AS +F A+N + T+DLHG H A++LL HL + +
Sbjct: 210 EQAKAKTQELEKASKEASKSVFIAKNAKNDK-FTVDLHGLHANDAIELLVEHLDGIK-SN 267
Query: 460 SVQTLRVITGCGSHGVGKS-KLKQSVIELVENEGLHWSEENRGTVLIKL 507
+ +ITG G+H K+K V +L++ +G +SE N G+++ L
Sbjct: 268 KGKEFTIITGAGNHSDANGPKIKPMVHKLMKEKGYTYSEVNNGSIVCTL 316
>CGD|CAL0006270 [details] [associations]
symbol:orf19.2246 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] CGD:CAL0006270 Pfam:PF01713
INTERPRO:IPR002625 EMBL:AACQ01000095 EMBL:AACQ01000096
SMART:SM00463 PROSITE:PS50828 InterPro:IPR013899 Pfam:PF08590
eggNOG:NOG255699 RefSeq:XP_714774.1 RefSeq:XP_714836.1
ProteinModelPortal:Q59Z54 STRING:Q59Z54 GeneID:3643524
GeneID:3643573 KEGG:cal:CaO19.2246 KEGG:cal:CaO19.9786
Uniprot:Q59Z54
Length = 256
Score = 175 (66.7 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 50/157 (31%), Positives = 82/157 (52%)
Query: 357 AKGDEYQVFRKDAKQHWNSMKSCYQKASAAYSKGEWGYAAH-LSEQGKSLTKLAQKADEK 415
A EY+ R +A + + + Q++ AY +G+ G AH LSE+ K + A++ + K
Sbjct: 23 ATDSEYKRLRSEADRLFQKRQQLSQQSQNAYKQGD-GQKAHELSEESKRVLAQAEECNRK 81
Query: 416 ASHDIFKARNKSFENVITIDLHGQHVKPAMKLLKLHLVMVSYAQSVQTLRVITGCGSHGV 475
A+ +F+ N+ IDLHG +VK A +L+ + + L VI G G H
Sbjct: 82 AAEYVFRENNED-SGPDEIDLHGLYVKEAEWILERRIYYAVKTNQLH-LNVIVGKGLHSA 139
Query: 476 -GKSKLKQSVIELVENEGL-HW-SEENRGTVLIKLDG 509
G +K+K +V EL + GL H+ ++N G ++I L G
Sbjct: 140 NGVAKIKPAVDELCDQVGLNHYIDKKNSGVLVIDLKG 176
>UNIPROTKB|Q59Z54 [details] [associations]
symbol:CaO19.2246 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] CGD:CAL0006270 Pfam:PF01713 INTERPRO:IPR002625
EMBL:AACQ01000095 EMBL:AACQ01000096 SMART:SM00463 PROSITE:PS50828
InterPro:IPR013899 Pfam:PF08590 eggNOG:NOG255699 RefSeq:XP_714774.1
RefSeq:XP_714836.1 ProteinModelPortal:Q59Z54 STRING:Q59Z54
GeneID:3643524 GeneID:3643573 KEGG:cal:CaO19.2246
KEGG:cal:CaO19.9786 Uniprot:Q59Z54
Length = 256
Score = 175 (66.7 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 50/157 (31%), Positives = 82/157 (52%)
Query: 357 AKGDEYQVFRKDAKQHWNSMKSCYQKASAAYSKGEWGYAAH-LSEQGKSLTKLAQKADEK 415
A EY+ R +A + + + Q++ AY +G+ G AH LSE+ K + A++ + K
Sbjct: 23 ATDSEYKRLRSEADRLFQKRQQLSQQSQNAYKQGD-GQKAHELSEESKRVLAQAEECNRK 81
Query: 416 ASHDIFKARNKSFENVITIDLHGQHVKPAMKLLKLHLVMVSYAQSVQTLRVITGCGSHGV 475
A+ +F+ N+ IDLHG +VK A +L+ + + L VI G G H
Sbjct: 82 AAEYVFRENNED-SGPDEIDLHGLYVKEAEWILERRIYYAVKTNQLH-LNVIVGKGLHSA 139
Query: 476 -GKSKLKQSVIELVENEGL-HW-SEENRGTVLIKLDG 509
G +K+K +V EL + GL H+ ++N G ++I L G
Sbjct: 140 NGVAKIKPAVDELCDQVGLNHYIDKKNSGVLVIDLKG 176
>UNIPROTKB|E2R8V6 [details] [associations]
symbol:N4BP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046404 "ATP-dependent
polydeoxyribonucleotide 5'-hydroxyl-kinase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF02845 PROSITE:PS51140
Pfam:PF01713 INTERPRO:IPR002625 GO:GO:0005524 GO:GO:0004519
SUPFAM:SSF46934 GO:GO:0046404 PROSITE:PS50828
GeneTree:ENSGT00510000047015 OMA:FEKDCAT InterPro:IPR013899
Pfam:PF08590 EMBL:AAEX03002531 ProteinModelPortal:E2R8V6
Ensembl:ENSCAFT00000025237 Uniprot:E2R8V6
Length = 1773
Score = 156 (60.0 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 46/152 (30%), Positives = 75/152 (49%)
Query: 361 EYQVFRKDAKQHWNSMKSCYQKASAAYSKGEWGYAAHLSEQGKSLTKLAQKADEKASHDI 420
EY +R +A H CY KA AY G+ A ++QG + ++A+ A+ +I
Sbjct: 1621 EYNDYRAEAFLHQQKRMECYSKAKEAYRMGKKHVATFYAQQGSLHEQKMKEANHLAAVEI 1680
Query: 421 FKARNKSFENVITIDLHGQHVKPAMKLLKLHLVMVS--YAQS--VQTLRVITGCGSHGVG 476
F+ N S +DLHG HV A++ L L + + Q+ L VITG G+H G
Sbjct: 1681 FEKVNASLLPQNVLDLHGLHVDEAIEHLMTVLQQKTEEFKQNGGKSYLSVITGRGNHSQG 1740
Query: 477 K-SKLKQSVIELVENEGLHWSEENRGTVLIKL 507
+++K +VI+ + + +SE G + + L
Sbjct: 1741 GVARIKPAVIKYLISHSFRFSEIKPGCLKVML 1772
Score = 84 (34.6 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 46/186 (24%), Positives = 74/186 (39%)
Query: 177 DKEEMEQFLYSMLGDECQFSMAVVRDVLCQCGYNVEKAMDVLLDLSAPSNERSMNDDDDF 236
D+EE+ + M D VV +L +C + VE AMD LL+LSA + + F
Sbjct: 45 DREELFTSISEMFSD---LDPDVVYLMLSECDFKVENAMDCLLELSATDAKVEESSSKSF 101
Query: 237 TFKED------RRFITEHTDNFTDRASDCTSYSS---ESDLYDSIWSTGYNYRNNSKVLI 287
E+ R + ++T S S+ DL DS+ + N+S
Sbjct: 102 VASENQVSAVGREIMEKYTPEEEREDSKMDSFLDMQLTEDL-DSLIQNAFEKLNSSP--- 157
Query: 288 GSEVPS--PLKASDQSDLPQKVLES-LFNISKSPQHEPTTMNWRNVVKKLQALGPRFDVS 344
+V S PL+ + P + S N++ + ++ N+ AL +S
Sbjct: 158 DDQVYSFLPLQGVNSFSDPSAFINSDSSNMTPILSTQNMDLDSENLENSASALSSNTLIS 217
Query: 345 HSSSTE 350
HS S E
Sbjct: 218 HSVSDE 223
Score = 57 (25.1 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 28 NKPTATDGEEVQNDTKNQIIHSLTEAFGSVSLEEATSAFCEANGDVNKAEELL 80
+K T + E+ + +++ ++ L + FGS SLE + N D+ A LL
Sbjct: 1074 DKSTYVEESELTSADESENLNILCKLFGSFSLEALKDLYERCNKDIIWATSLL 1126
Score = 46 (21.3 bits), Expect = 5.1e-06, Sum P(4) = 5.1e-06
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 177 DKEEMEQFLYSMLGDECQFSMAVVRDVLCQCGYNVEKAMDVLLDLSAPSNERSMNDDDDF 236
D+ E L + G FS+ ++D+ +C ++ A +LLD +E + +D +F
Sbjct: 1088 DESENLNILCKLFGS---FSLEALKDLYERCNKDIIWATSLLLD-----SETKLCEDTEF 1139
Score = 45 (20.9 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 21/92 (22%), Positives = 39/92 (42%)
Query: 219 LDLSAPSNERSMNDDDDFTFKEDRRFITEHTDNFTDRASDCTSYSSES--DLY-----DS 271
LD+ R M D + +E + ++N S+S E+ DLY D
Sbjct: 1061 LDVQETIPYRVMYDKSTYV-EESELTSADESENLNILCKLFGSFSLEALKDLYERCNKDI 1119
Query: 272 IWSTGYNYRNNSKVLIGSEVPSPLKASDQSDL 303
IW+T + +K+ +E + K+ D++ +
Sbjct: 1120 IWATSLLLDSETKLCEDTEFENIQKSYDEAQI 1151
Score = 39 (18.8 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 18/77 (23%), Positives = 36/77 (46%)
Query: 280 RNNSKVLIGSEVPSPLKASDQSDLPQKVLESLF-NISKSPQHEPTTMNWRNVVKKLQALG 338
+NN++VL S+V P + + P + +L ++S+ ++ T ++ L
Sbjct: 1229 KNNNEVLPSSQVELPGLYNIKQSFPGTLKPTLAKDMSEMEKNLEATEIGDSIHSSLNLSD 1288
Query: 339 PRFDVSHSSSTEHQQEL 355
VS +S+ E +EL
Sbjct: 1289 ILNSVSSTSNLELNEEL 1305
Score = 37 (18.1 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 19 APNNSSRDSNKPTATDGEEVQN 40
+PN S+ D K D E N
Sbjct: 844 SPNESTEDDKKSQYDDASESFN 865
>DICTYBASE|DDB_G0268232 [details] [associations]
symbol:DDB_G0268232 "ubiquitin system component Cue
domain containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR003892 PROSITE:PS51140
dictyBase:DDB_G0268232 Pfam:PF01713 INTERPRO:IPR002625
EMBL:AAFI02000003 PROSITE:PS50828 InterPro:IPR013899 Pfam:PF08590
eggNOG:NOG286210 RefSeq:XP_647661.1 ProteinModelPortal:Q55F72
EnsemblProtists:DDB0232946 GeneID:8616478 KEGG:ddi:DDB_G0268232
InParanoid:Q55F72 Uniprot:Q55F72
Length = 1025
Score = 175 (66.7 bits), Expect = 9.7e-11, Sum P(3) = 9.7e-11
Identities = 47/166 (28%), Positives = 86/166 (51%)
Query: 338 GPRFDVSHSSSTEHQQELCAKGDEYQVFRKDAKQHWNSMKSCYQKASAAYSKGEWGYAAH 397
G F S SS H++ Y R +A+++ +C++ A+ AY K + A
Sbjct: 855 GSSFSSSSSSRNNHKKNQ----KSYTDHRMEAERYIKMRNACFKSAAEAYMKNKPADARS 910
Query: 398 LSEQGKSLTKLAQKADEKASHDIFKARNKSFENVITIDLHGQHVKPAMKLLKLHLVMVSY 457
LSEQGK +LA++A+ AS+ IF N + + IDLHG HV A+ +++ L + S
Sbjct: 911 LSEQGKRYDELAKEANLCASNQIFMECNSRIGDTLRIDLHGLHVNEALDMVQQALDIHSQ 970
Query: 458 AQ----SVQTLRVITGCGSHGVGK-SKLKQSVIELVENEGLHWSEE 498
+ + + ITG G+H G +++K +++ ++ + +S++
Sbjct: 971 GEYDGKKPKYINFITGQGNHSQGGIARIKPALLSFLKECNIKYSDK 1016
Score = 54 (24.1 bits), Expect = 9.7e-11, Sum P(3) = 9.7e-11
Identities = 33/158 (20%), Positives = 62/158 (39%)
Query: 153 KDYVRASPRKSGRFKGVGDDQSGFDKEEMEQFLYSMLGDECQFSMAVVRDVLCQCGYNVE 212
K+ ++ K KG ++ D E+ L + ++S + L + Y+V
Sbjct: 482 KEKQKSEKDKKRNSKGHSQNRLLMDFNEIIAHLSDLFP---KYSKRDLTGYLDKHSYDVN 538
Query: 213 KAMDVLLDLSAP---SNERSMNDDDDFTFKEDRRFITEHTDNFTDRASDCTSYSSESDLY 269
+D LL L S + + ND+D+ + K T T T++ ++ S +
Sbjct: 539 ATIDTLLSLQTIDEFSGDDNNNDNDNDS-KVTTTTTTTTTSTNTNKNNN-ESQKPTTPTK 596
Query: 270 DSIWSTGYNYRNNSKVLIGSEVPSPLKASDQSDLPQKV 307
+ + N NN+ G+ PS D+ D K+
Sbjct: 597 KMVNNNNNNSNNNNSNSGGNNSPSFKSIIDEQDFISKI 634
Score = 47 (21.6 bits), Expect = 9.9e-10, Sum P(3) = 9.9e-10
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 265 ESDLYDSIW-STGYNYRNNSKVLIGSEVPSPLKASDQSDLPQKVLES-----LFNISKSP 318
E +L +S++ TGY++++ + S A S+ KV ES L N +P
Sbjct: 707 EEELLESLFLQTGYHFKDTMSYIYEVFPESKHNAKSVSNFANKVRESSNQYYLKNNIYNP 766
Query: 319 QHEPTTMNWRNVVKKLQ 335
Q E ++ +++Q
Sbjct: 767 QAERDKLSQLQAQQEIQ 783
Score = 46 (21.3 bits), Expect = 9.7e-11, Sum P(3) = 9.7e-11
Identities = 13/52 (25%), Positives = 28/52 (53%)
Query: 21 NNSSRDSNKPTATDGEE--VQNDTKNQIIHSLTEAFGSVSLEEATSAFCEAN 70
NN++ ++N T D + +Q +T N +S E F + +++ + F +A+
Sbjct: 171 NNNNNNNNNNTDNDSKMKGLQYNTSNS--NSSYEPFRDIEVQKNKNQFFDAS 220
Score = 43 (20.2 bits), Expect = 9.9e-10, Sum P(3) = 9.9e-10
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 21 NNSSRDSNKPTATDGEEVQNDTKN 44
N ++ +S KPT + V N+ N
Sbjct: 582 NKNNNESQKPTTPTKKMVNNNNNN 605
Score = 43 (20.2 bits), Expect = 1.3e-09, Sum P(4) = 1.3e-09
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 44 NQIIHSLTEAFGSVSLEEATSAFCEANGDVNKAEELLTAL 83
N+II L++ F S + T + + DVN + L +L
Sbjct: 508 NEIIAHLSDLFPKYSKRDLTGYLDKHSYDVNATIDTLLSL 547
Score = 37 (18.1 bits), Expect = 1.3e-09, Sum P(4) = 1.3e-09
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 21 NNSSRDSNKPTATDGEEVQNDTK 43
NN++ ++N + ND+K
Sbjct: 164 NNNNNNNNNNNNNNNNNTDNDSK 186
Score = 37 (18.1 bits), Expect = 5.0e-09, Sum P(4) = 5.0e-09
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 211 VEKAMDVLLDLSAPSNERSMNDDDD 235
V+K + D S E S NDDD+
Sbjct: 209 VQKNKNQFFDASTEDPELS-NDDDE 232
>UNIPROTKB|Q86UW6 [details] [associations]
symbol:N4BP2 "NEDD4-binding protein 2" species:9606 "Homo
sapiens" [GO:0005829 "cytosol" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0004519 "endonuclease activity"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0046404
"ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity"
evidence=IDA] InterPro:IPR003892 InterPro:IPR009060 PROSITE:PS51140
Pfam:PF01713 INTERPRO:IPR002625 GO:GO:0005524 GO:GO:0005737
PDB:3BHB PDBsum:3BHB GO:GO:0004519 SUPFAM:SSF46934 GO:GO:0046404
PROSITE:PS50828 eggNOG:NOG80242 EMBL:AY267013 EMBL:BC126466
EMBL:AK001542 EMBL:AB037834 IPI:IPI00328825 IPI:IPI00409742
RefSeq:NP_060647.2 UniGene:Hs.391463 PDB:2D9I PDB:2VKC PDB:3FAU
PDBsum:2D9I PDBsum:2VKC PDBsum:3FAU ProteinModelPortal:Q86UW6
SMR:Q86UW6 IntAct:Q86UW6 STRING:Q86UW6 PhosphoSite:Q86UW6
DMDM:145559498 PaxDb:Q86UW6 PRIDE:Q86UW6 Ensembl:ENST00000261435
GeneID:55728 KEGG:hsa:55728 UCSC:uc003guy.4 UCSC:uc010ifr.3
CTD:55728 GeneCards:GC04P040058 H-InvDB:HIX0004169 HGNC:HGNC:29851
HPA:HPA036770 neXtProt:NX_Q86UW6 PharmGKB:PA162396580
HOGENOM:HOG000113717 HOVERGEN:HBG101251 InParanoid:Q86UW6 KO:K15720
OMA:FEKDCAT OrthoDB:EOG46WZ7M PhylomeDB:Q86UW6
EvolutionaryTrace:Q86UW6 GenomeRNAi:55728 NextBio:60645
ArrayExpress:Q86UW6 Bgee:Q86UW6 CleanEx:HS_N4BP2
Genevestigator:Q86UW6 GermOnline:ENSG00000078177 InterPro:IPR013899
Pfam:PF08590 Uniprot:Q86UW6
Length = 1770
Score = 153 (58.9 bits), Expect = 7.7e-10, Sum P(3) = 7.7e-10
Identities = 45/152 (29%), Positives = 76/152 (50%)
Query: 361 EYQVFRKDAKQHWNSMKSCYQKASAAYSKGEWGYAAHLSEQGKSLTKLAQKADEKASHDI 420
+Y +R +A H CY KA AY G+ A ++QG + ++A+ A+ +I
Sbjct: 1618 DYDDYRAEAFLHQQKRMECYSKAKEAYRIGKKNVATFYAQQGTLHEQKMKEANHLAAIEI 1677
Query: 421 FKARNKSFENVITIDLHGQHVKPAMK-LLK-LHLVMVSYAQS--VQTLRVITGCGSHGVG 476
F+ N S +DLHG HV A++ L++ L + Q+ L VITG G+H G
Sbjct: 1678 FEKVNASLLPQNVLDLHGLHVDEALEHLMRVLEKKTEEFKQNGGKPYLSVITGRGNHSQG 1737
Query: 477 K-SKLKQSVIELVENEGLHWSEENRGTVLIKL 507
+++K +VI+ + + +SE G + + L
Sbjct: 1738 GVARIKPAVIKYLISHSFRFSEIKPGCLKVML 1769
Score = 74 (31.1 bits), Expect = 7.7e-10, Sum P(3) = 7.7e-10
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 177 DKEEMEQFLYSMLGDECQFSMAVVRDVLCQCGYNVEKAMDVLLDLSAPSNERSMNDDDDF 236
D+EE+ + + D VV +L +C + VE AMD LL+LSA + + F
Sbjct: 46 DQEELFTSISEIFSD---LDPDVVYLMLSECDFKVENAMDCLLELSATDTKIEESSSQSF 102
Query: 237 TFKEDR 242
E++
Sbjct: 103 VASENQ 108
Score = 57 (25.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 28 NKPTATDGEEVQNDTKNQIIHSLTEAFGSVSLEEATSAFCEANGDVNKAEELL 80
+K T + E+ + +++ ++ L + FGS SLE + N D+ A LL
Sbjct: 1073 DKSTFVEESELTSADESENLNILCKLFGSFSLEALKDLYERCNKDIIWATSLL 1125
Score = 49 (22.3 bits), Expect = 7.7e-10, Sum P(3) = 7.7e-10
Identities = 19/81 (23%), Positives = 36/81 (44%)
Query: 245 ITEHTDNFTDRASDCTSYSSESDLYDSIWSTGYNYRNNSKVLIG--SEVPSPLKASDQSD 302
+TE D+ A + + S + +Y + S N N+S I S +P+ ++ +
Sbjct: 138 LTEDLDSLIQNAFEKLNSSPDDQVYSFLPSQDVNSFNDSSEFINPDSSNMTPIFSTQNMN 197
Query: 303 LPQKVLE---SLFNISKSPQH 320
L + LE S +++ P H
Sbjct: 198 LNGENLENSGSTLSLNPLPSH 218
Score = 48 (22.0 bits), Expect = 9.7e-10, Sum P(3) = 9.7e-10
Identities = 37/162 (22%), Positives = 61/162 (37%)
Query: 234 DDFTFKEDRRFIT-EHTDNFTDRASDCTSYSSES--DLY-----DSIWSTGYNYRNNSKV 285
D TF E+ + + ++N S+S E+ DLY D IW+T + +K+
Sbjct: 1073 DKSTFVEESELTSADESENLNILCKLFGSFSLEALKDLYERCNKDIIWATSLLLDSETKL 1132
Query: 286 LIGSEVPSPLKASDQSDLPQKVLESLFNISKSPQHEPTTMNWRNVVKKLQALGPRFDVSH 345
+E + K+ D S + L N+ + T N + V P F
Sbjct: 1133 CEDTEFENFQKSCDGSQIGPFSLG--LNLKEIISQRGTLENSNSPV-------PEFSHGI 1183
Query: 346 SSSTEHQQELC--AKGDEYQV-FRKDAKQHWNSMKSCYQKAS 384
S Q C +G+ Q R ++ SM S + A+
Sbjct: 1184 GISNADSQSTCDAERGNSEQAEMRAVTPENHESMTSIFPSAA 1225
Score = 46 (21.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 177 DKEEMEQFLYSMLGDECQFSMAVVRDVLCQCGYNVEKAMDVLLDLSAPSNERSMNDDDDF 236
D+ E L + G FS+ ++D+ +C ++ A +LLD +E + +D +F
Sbjct: 1087 DESENLNILCKLFGS---FSLEALKDLYERCNKDIIWATSLLLD-----SETKLCEDTEF 1138
>SGD|S000006120 [details] [associations]
symbol:YPL199C "Putative protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0008150 "biological_process" evidence=ND]
SGD:S000006120 Pfam:PF01713 INTERPRO:IPR002625 GO:GO:0005737
EMBL:BK006949 SMART:SM00463 PROSITE:PS50828 InterPro:IPR013899
Pfam:PF08590 HOGENOM:HOG000205925 OrthoDB:EOG4N07QM EMBL:Z73555
PIR:S65218 RefSeq:NP_015125.1 ProteinModelPortal:Q08954 SMR:Q08954
IntAct:Q08954 MINT:MINT-2494044 STRING:Q08954 PaxDb:Q08954
PeptideAtlas:Q08954 PRIDE:Q08954 EnsemblFungi:YPL199C GeneID:855902
KEGG:sce:YPL199C CYGD:YPL199c eggNOG:NOG255699 OMA:RTEANEG
NextBio:980595 Genevestigator:Q08954 GermOnline:YPL199C
Uniprot:Q08954
Length = 240
Score = 161 (61.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 46/153 (30%), Positives = 76/153 (49%)
Query: 360 DEYQVFRKDAKQHWNSMKSCYQKASAAYSKGEWGYAAHLSEQGKSLTKLAQKADEKASHD 419
+EYQ R+ A + + ++ AY +G+ A LSE+ K+ K A+ + +A+
Sbjct: 24 EEYQRLRRLADEAYKKRDQLSHESQTAYQQGDKKLAHELSEKSKAQLKTAEDFNMQAAEY 83
Query: 420 IFKARNKSFENVITIDLHGQHVKPAMKLLKLHLVMVSYAQSVQTLRVITGCGSHGV-GKS 478
+F N + + IDLHG +VK A+ +L+ + Q L VI G G H G +
Sbjct: 84 VF-VENNADSSSNEIDLHGLYVKEALFILQKRIKFAIDHNEPQ-LNVIVGKGLHSQNGIA 141
Query: 479 KLKQSVIELVENEGL--HWSEENRGTVLIKLDG 509
KLK S+ E G+ H + N G ++++L G
Sbjct: 142 KLKPSIEEFCAKHGIRNHLEKGNSGVLVLELQG 174
>UNIPROTKB|E1BIJ5 [details] [associations]
symbol:N4BP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046404 "ATP-dependent polydeoxyribonucleotide
5'-hydroxyl-kinase activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] InterPro:IPR003892
InterPro:IPR009060 Pfam:PF02845 PROSITE:PS51140 Pfam:PF01713
INTERPRO:IPR002625 GO:GO:0005524 GO:GO:0004519 SUPFAM:SSF46934
GO:GO:0046404 PROSITE:PS50828 GeneTree:ENSGT00510000047015
OMA:FEKDCAT InterPro:IPR013899 Pfam:PF08590 EMBL:DAAA02017484
IPI:IPI00704237 Ensembl:ENSBTAT00000000200 Uniprot:E1BIJ5
Length = 1768
Score = 159 (61.0 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 46/152 (30%), Positives = 75/152 (49%)
Query: 361 EYQVFRKDAKQHWNSMKSCYQKASAAYSKGEWGYAAHLSEQGKSLTKLAQKADEKASHDI 420
EY +R +A H CY KA AY G+ A ++QG + ++A+ A+ +I
Sbjct: 1616 EYDDYRAEAFLHQQKRMECYSKAKEAYRMGKKNVATFYAQQGSLHEQKMKEANHLAAVEI 1675
Query: 421 FKARNKSFENVITIDLHGQHVKPAMKLLKLHLVMVS--YAQS--VQTLRVITGCGSHGVG 476
F+ N S +DLHG HV A++ L L + + Q+ L VITG G+H G
Sbjct: 1676 FEKVNASLLPQNVLDLHGLHVDEAIEHLTTVLQQKTEEFKQNGGKPYLSVITGRGNHSQG 1735
Query: 477 K-SKLKQSVIELVENEGLHWSEENRGTVLIKL 507
+++K +VI+ + + +SE G + + L
Sbjct: 1736 GVARIKPAVIKYLTSHNFRFSEIKPGCLKVML 1767
Score = 72 (30.4 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 177 DKEEMEQFLYSMLGDECQFSMAVVRDVLCQCGYNVEKAMDVLLDLSAPSNERSMNDDDDF 236
D+EE+ + M D VV +L +C + VE AMD LL+LSA + + +F
Sbjct: 45 DQEELFTSVSEMFSD---LDPDVVYLMLSECDFKVENAMDCLLELSATDAKIEESSSTNF 101
Query: 237 TFKE 240
E
Sbjct: 102 IASE 105
Score = 62 (26.9 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 28 NKPTATDGEEVQNDTKNQIIHSLTEAFGSVSLEEATSAFCEANGDVNKAEELL 80
+K T + E+ N +++ ++ L + FGS SLE + N D+ A LL
Sbjct: 1070 DKSTYVEESELTNADESENLNILCKLFGSFSLEALKDLYERCNKDIIWATSLL 1122
Score = 46 (21.3 bits), Expect = 5.6e-07, Sum P(3) = 5.6e-07
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 177 DKEEMEQFLYSMLGDECQFSMAVVRDVLCQCGYNVEKAMDVLLDLSAPSNERSMNDDDDF 236
D+ E L + G FS+ ++D+ +C ++ A +LLD +E + +D +F
Sbjct: 1084 DESENLNILCKLFGS---FSLEALKDLYERCNKDIIWATSLLLD-----SETKLCEDTEF 1135
Score = 44 (20.5 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 21/92 (22%), Positives = 39/92 (42%)
Query: 219 LDLSAPSNERSMNDDDDFTFKEDRRFITEHTDNFTDRASDCTSYSSES--DLY-----DS 271
LD+ R M D + +E + ++N S+S E+ DLY D
Sbjct: 1057 LDVQEAIPYRVMYDKSTYV-EESELTNADESENLNILCKLFGSFSLEALKDLYERCNKDI 1115
Query: 272 IWSTGYNYRNNSKVLIGSEVPSPLKASDQSDL 303
IW+T + +K+ +E + K+ D++ +
Sbjct: 1116 IWATSLLLDSETKLCEDTEFENIKKSYDEAQI 1147
Score = 42 (19.8 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 21/78 (26%), Positives = 32/78 (41%)
Query: 282 NSKVL-IGSEVPSPLKASDQSDLPQKVLESLFNISKSPQHEPTTMNWRNVVKKLQALGP- 339
NS+V G +PS L SD +L S+ + S HE T + K + L
Sbjct: 1265 NSEVAETGGNIPSSLNLSD-------ILNSVSSTSNLELHEETYFTNSFEINKNENLPKD 1317
Query: 340 --RFDVSHSSSTEHQQEL 355
+F + E +QE+
Sbjct: 1318 YVKFPNTEEFMIEEEQEM 1335
>RGD|1565738 [details] [associations]
symbol:N4bp2 "NEDD4 binding protein 2" species:10116 "Rattus
norvegicus" [GO:0004519 "endonuclease activity" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0046404 "ATP-dependent
polydeoxyribonucleotide 5'-hydroxyl-kinase activity"
evidence=IEA;ISO] Pfam:PF01713 RGD:1565738 INTERPRO:IPR002625
GO:GO:0005524 GO:GO:0004519 GO:GO:0046404 SMART:SM00463
PROSITE:PS50828 GeneTree:ENSGT00510000047015 OrthoDB:EOG46WZ7M
InterPro:IPR013899 Pfam:PF08590 IPI:IPI00364487
ProteinModelPortal:D3ZLS6 Ensembl:ENSRNOT00000031792
UCSC:RGD:1565738 Uniprot:D3ZLS6
Length = 1677
Score = 164 (62.8 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 54/194 (27%), Positives = 92/194 (47%)
Query: 319 QHEPTTMNWRNVVKKLQALGPRFDVSHSSSTEHQQELCAKGDEYQVFRKDAKQHWNSMKS 378
Q+E T + K+ +A P+ + ++ Q+ + EY +R +A H
Sbjct: 1486 QNESNTSHSAQKSKEKKAKKPK-EADDTAGDPSFQDF--EYPEYDDYRAEAFLHQQKRME 1542
Query: 379 CYQKASAAYSKGEWGYAAHLSEQGKSLTKLAQKADEKASHDIFKARNKSFENVITIDLHG 438
CY KA AY G+ A ++QG + ++A+ A+ +IF+ N S +DLHG
Sbjct: 1543 CYSKAKEAYRMGKKNVATFYAQQGSLHEQKMREANHLAAVEIFEKVNASLLPQNVLDLHG 1602
Query: 439 QHVKPAMKLLKLHLVMVS--YAQS--VQTLRVITGCGSHGVGK-SKLKQSVIELVENEGL 493
HV A++ L L + + QS L VITG G+H G +++K +VI+ + +
Sbjct: 1603 LHVDEAIEHLTAVLQQKTEEFKQSGGKPYLSVITGRGNHSQGGVARIKPAVIKYLTSHSF 1662
Query: 494 HWSEENRGTVLIKL 507
+SE G + + L
Sbjct: 1663 RFSEIKPGCLKVML 1676
Score = 62 (26.9 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 28 NKPTATDGEEVQNDTKNQIIHSLTEAFGSVSLEEATSAFCEANGDVNKAEELL 80
+K T + E+ N +++ ++ L + FGS SLE + N D+ A LL
Sbjct: 985 DKSTFVEESELTNADESENLNILCKLFGSFSLEALKDLYERCNKDIIWATSLL 1037
Score = 52 (23.4 bits), Expect = 4.8e-08, Sum P(4) = 4.8e-08
Identities = 21/83 (25%), Positives = 38/83 (45%)
Query: 228 RSMNDDDDFTFKEDRRFITEHTDNFTDRASDCTSYSSES--DLY-----DSIWSTGYNYR 280
R M+D F +E + ++N S+S E+ DLY D IW+T
Sbjct: 981 RVMHDKSTFV-EESELTNADESENLNILCKLFGSFSLEALKDLYERCNKDIIWATSLLLD 1039
Query: 281 NNSKVLIGSEVPSPLKASDQSDL 303
+ +K+ +EV +P ++ +S +
Sbjct: 1040 SETKLCEDAEVVNPPESYSESQV 1062
Score = 44 (20.5 bits), Expect = 4.8e-08, Sum P(4) = 4.8e-08
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 19 APNNSSRDSNKPTATDGEEVQNDTKNQIIHSLTEAFGSVSLEEATSA 65
A +S RDS T+T E V + + + LTE +LE AT A
Sbjct: 526 ACEDSPRDSEAVTSTKEENVSSASPKHL--DLTE---EKTLEVATQA 567
Score = 44 (20.5 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 177 DKEEMEQFLYSMLGDECQFSMAVVRDVLCQCGYNVEKAMDVLLD 220
D+ E L + G FS+ ++D+ +C ++ A +LLD
Sbjct: 999 DESENLNILCKLFGS---FSLEALKDLYERCNKDIIWATSLLLD 1039
Score = 37 (18.1 bits), Expect = 4.8e-08, Sum P(4) = 4.8e-08
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 161 RKSGRFKGVGDDQSGFDKEEMEQFLYSMLGD 191
R +G+ K +G +S E+ + L + +GD
Sbjct: 681 RTAGKKKTIGKQKSKSSLEKPKPELSNFVGD 711
>UNIPROTKB|F1S4H4 [details] [associations]
symbol:N4BP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046404 "ATP-dependent polydeoxyribonucleotide
5'-hydroxyl-kinase activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] Pfam:PF01713
INTERPRO:IPR002625 GO:GO:0005524 GO:GO:0004519 GO:GO:0046404
PROSITE:PS50828 GeneTree:ENSGT00510000047015 OMA:FEKDCAT
InterPro:IPR013899 Pfam:PF08590 EMBL:CU407133 EMBL:CU694865
Ensembl:ENSSSCT00000009619 Uniprot:F1S4H4
Length = 1406
Score = 157 (60.3 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 46/152 (30%), Positives = 75/152 (49%)
Query: 361 EYQVFRKDAKQHWNSMKSCYQKASAAYSKGEWGYAAHLSEQGKSLTKLAQKADEKASHDI 420
EY +R +A H CY KA AY G+ A ++QG + ++A+ A+ +I
Sbjct: 1254 EYDDYRAEAFLHQQKRIECYSKAKEAYRMGKKNVATFYAQQGSLHEQKMKEANHLAAVEI 1313
Query: 421 FKARNKSFENVITIDLHGQHVKPAMKLLKLHLVMVS--YAQS--VQTLRVITGCGSHGVG 476
F+ N S +DLHG HV A++ L L + + Q+ L VITG G+H G
Sbjct: 1314 FEKVNASLLPQNVLDLHGLHVDEAIEHLTTVLQQKTEEFKQNGGKPYLSVITGRGNHSQG 1373
Query: 477 K-SKLKQSVIELVENEGLHWSEENRGTVLIKL 507
+++K +VI+ + + +SE G + + L
Sbjct: 1374 GVARIKPAVIKYLTSHNFRFSEIKPGCLKVML 1405
Score = 57 (25.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 28 NKPTATDGEEVQNDTKNQIIHSLTEAFGSVSLEEATSAFCEANGDVNKAEELL 80
+K T + E+ + +++ ++ L + FGS SLE + N D+ A LL
Sbjct: 707 DKSTYVEESELTSADESENLNILCKLFGSFSLEALKDLYERCNKDIIWATSLL 759
Score = 46 (21.3 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 177 DKEEMEQFLYSMLGDECQFSMAVVRDVLCQCGYNVEKAMDVLLDLSAPSNERSMNDDDDF 236
D+ E L + G FS+ ++D+ +C ++ A +LLD +E + +D +F
Sbjct: 721 DESENLNILCKLFGS---FSLEALKDLYERCNKDIIWATSLLLD-----SETKLCEDTEF 772
Score = 45 (20.9 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 21/92 (22%), Positives = 39/92 (42%)
Query: 219 LDLSAPSNERSMNDDDDFTFKEDRRFITEHTDNFTDRASDCTSYSSES--DLY-----DS 271
LD+ R M D + +E + ++N S+S E+ DLY D
Sbjct: 694 LDVQETIPYRVMYDKSTYV-EESELTSADESENLNILCKLFGSFSLEALKDLYERCNKDI 752
Query: 272 IWSTGYNYRNNSKVLIGSEVPSPLKASDQSDL 303
IW+T + +K+ +E + K+ D++ +
Sbjct: 753 IWATSLLLDSETKLCEDTEFENIKKSYDEAQI 784
>POMBASE|SPAC11H11.03c [details] [associations]
symbol:SPAC11H11.03c "SMR and DUF1771 domain protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004519
"endonuclease activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA
repair" evidence=ISM] [GO:0046404 "ATP-dependent
polydeoxyribonucleotide 5'-hydroxyl-kinase activity" evidence=ISS]
PomBase:SPAC11H11.03c Pfam:PF01713 INTERPRO:IPR002625 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0006281 GO:GO:0004519
GO:GO:0046404 SMART:SM00463 PROSITE:PS50828 InterPro:IPR013899
Pfam:PF08590 PIR:T37552 RefSeq:NP_594721.1
EnsemblFungi:SPAC11H11.03c.1 GeneID:2541436 KEGG:spo:SPAC11H11.03c
eggNOG:NOG266962 HOGENOM:HOG000205925 OMA:ARILENT OrthoDB:EOG4N07QM
NextBio:20802538 Uniprot:Q9UTP4
Length = 206
Score = 145 (56.1 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 39/150 (26%), Positives = 74/150 (49%)
Query: 360 DEYQVFRKDAKQHWNSMKSCYQKASAAYSKGEWGYAAHLSEQGKSLTKLAQKADEKASHD 419
+EY+ FR A + +Q+A AYS G A LS++GK + + + +A+
Sbjct: 2 EEYEKFRALASKEAEKRGYLFQEAQHAYSAGNKAKAHELSQEGKLCGERMENYNRQAASA 61
Query: 420 IFKARNKSFENVITIDLHGQHVKPAMKLLKLHLVMVSYAQSVQTLRVITGCGSHGVGK-S 478
I+ +N N IDLHG ++ A++ ++ + + L +I G G+H
Sbjct: 62 IYLYKNSQC-NPDEIDLHGLYIDEAVQAVQQRIENC-IRRGDNHLHIIVGRGNHSANHVE 119
Query: 479 KLKQSVIELVENEGLHW-SEENRGTVLIKL 507
KL+ +++ ++E + + + SE N G + + L
Sbjct: 120 KLRPAIVRMLEQQSIKYNSEVNEGRIYVYL 149
>ZFIN|ZDB-GENE-061103-451 [details] [associations]
symbol:n4bp2 "NEDD4 binding protein 2" species:7955
"Danio rerio" [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF02845 PROSITE:PS51140
SMART:SM00546 Pfam:PF01713 INTERPRO:IPR002625
ZFIN:ZDB-GENE-061103-451 SUPFAM:SSF46934 SMART:SM00463
PROSITE:PS50828 eggNOG:NOG80242 CTD:55728 KO:K15720
OrthoDB:EOG46WZ7M InterPro:IPR013899 Pfam:PF08590 EMBL:BC125868
IPI:IPI00829210 RefSeq:NP_001073436.1 UniGene:Dr.83718
ProteinModelPortal:A0JMG4 SMR:A0JMG4 STRING:A0JMG4 GeneID:558048
KEGG:dre:558048 HOGENOM:HOG000170116 HOVERGEN:HBG095726
InParanoid:A0JMG4 NextBio:20882284 ArrayExpress:A0JMG4
Uniprot:A0JMG4
Length = 1692
Score = 156 (60.0 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 44/152 (28%), Positives = 78/152 (51%)
Query: 361 EYQVFRKDAKQHWNSMKSCYQKASAAYSKGEWGYAAHLSEQGKSLTKLAQKADEKASHDI 420
EY FR +A C+ KA+ A+ +G A+ ++QG + ++A+ +A+ I
Sbjct: 1540 EYDDFRTEATLQRRQQIECFNKAAEAHRQGRKDVASFYAQQGHMHGEKMREANHRAAMQI 1599
Query: 421 FKARNKSFENVITIDLHGQHVKPAMKLLKLHLV--MVSYAQSV--QTLRVITGCGSHGVG 476
F+ N S +DLHG HV A+ L L+ + + Q V L VITG G+ G
Sbjct: 1600 FQQVNASLLPQNILDLHGLHVDEAIHHLSQVLLDKCLEFHQGVCPPQLSVITGRGNRSQG 1659
Query: 477 K-SKLKQSVIELVENEGLHWSEENRGTVLIKL 507
++++ +V++ ++N+ ++E G VL+ L
Sbjct: 1660 GVARIRPAVLDYLKNQHYSYTEPKIGLVLVTL 1691
Score = 58 (25.5 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 23/91 (25%), Positives = 41/91 (45%)
Query: 133 GGSRQKRVVAVSGMVANMLGKDYVRASPR-KSGRFKGVGDDQSGFDKEEMEQFLYSMLGD 191
G + R +G G ++ +S SGR + D+ + M++ ++S L
Sbjct: 22 GSGSESRAYGTNGSFVTRAGATHLGSSTHYSSGRVESQSRDEI---IQRMQE-MFSHLDP 77
Query: 192 ECQFSMAVVRDVLCQCGYNVEKAMDVLLDLS 222
E V+ VL + + V+ AMD LL++S
Sbjct: 78 E------VICMVLSEVDFKVDNAMDSLLEMS 102
Score = 55 (24.4 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 48/199 (24%), Positives = 78/199 (39%)
Query: 167 KGVGDDQSGF-DKEEMEQFLYSMLGDECQFSMAVVRDVLCQCGYNVEKAMDVLLD----L 221
KG + + F + +Q L + G S+ ++ D+ +C ++E ++LLD L
Sbjct: 1034 KGSQVEDNDFRESNSKQQNLEILSGHFRHVSVDILEDLYEKCHQDIEWTTNLLLDSGERL 1093
Query: 222 SAPSNERS------MNDDDDFTFKEDRRFITEHTDNFTDRASDCTSYSSESDLYDSIWST 275
NE M + + + K + +D SD +S SS S + T
Sbjct: 1094 YKEDNEVDLGSLVPMQESCELSIKPTETVVCSQSDQARALLSDDSSNSSLSSISPKSQET 1153
Query: 276 GYNYRNNSKVLIGSEVPSPLKASDQSDLPQKVLESLFN-ISKS-PQHEPTTMNWRNVVKK 333
N S+V S+ SP ++S SD ES+ I +S P HE T+ K
Sbjct: 1154 -----NPSEVSPASDDWSPGQSS-LSDAEGYDEESMTEEICESEPSHE--TVKQLKEDTK 1205
Query: 334 LQALGPRFDVSHSSSTEHQ 352
+Q P + T Q
Sbjct: 1206 IQLAVPAIKEELAEKTGEQ 1224
Score = 38 (18.4 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 176 FDKEEMEQFLYSMLGD 191
+ E+ EQFL ++L D
Sbjct: 1478 YSLEQTEQFLQTLLDD 1493
>FB|FBgn0027532 [details] [associations]
symbol:CG7139 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] Pfam:PF01713 INTERPRO:IPR002625 EMBL:AE014296
SMART:SM00463 PROSITE:PS50828 GeneTree:ENSGT00510000047015
InterPro:IPR013899 Pfam:PF08590 FlyBase:FBgn0027532 UniGene:Dm.3205
GeneID:40448 KEGG:dme:Dmel_CG7139 GenomeRNAi:40448 NextBio:818835
EMBL:AF132164 RefSeq:NP_649378.1 SMR:Q9XZ11 IntAct:Q9XZ11
MINT:MINT-796871 STRING:Q9XZ11 EnsemblMetazoa:FBtr0078486
UCSC:CG7139-RA InParanoid:Q9XZ11 OMA:LDLHYLH Uniprot:Q9XZ11
Length = 969
Score = 159 (61.0 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 80/344 (23%), Positives = 144/344 (41%)
Query: 180 EMEQFLYSMLGDECQFSMAVVRDVLCQCGY---NVEKAMDVLLDLSAPSNER-SMNDDDD 235
++E+ + D+ QF+ + C NV + +D+ L S ++E+ + +
Sbjct: 623 QLEEIRQQTMRDDEQFARLLKHPGYADCSESPSNVAELLDMELAWSIYNSEQLAAKKAAE 682
Query: 236 FTFKEDRRFITEHTDNFTDRASDCTSYSS-ESDLYDSIWS-TGYNYRNNSKVLIGSEVPS 293
T ++ T+ + T + C ++ +D +++ TG NY +VL S V S
Sbjct: 683 LTARKQTP--TDIATHLT-KMKLCETFPDVPTDTVLEVFAATGSNYVQTVEVL-DSNVKS 738
Query: 294 PLKASDQSDLPQKVLESLFNISKSPQHEPTTMNWRNVVKKLQALGPRFDVS-HSS--STE 350
L +++L K L +S+ E + G R S ++S S +
Sbjct: 739 MLS---KAELYDKALREGEKLSEQMALEERRQQQQQKQHNSSGQGQRSSSSSYASGRSPQ 795
Query: 351 HQQEL-CAKGDEYQVFRKDAKQHWNSMKSCYQKASAAYSKGEWGYAAHLSEQGKSLTKLA 409
Q+E+ CA +++ R A H CY KA A +G A + SE K +
Sbjct: 796 LQEEVKCAALRDFEETRNMAAHHSQLKAECYLKAKQAVQRGNSSVALYYSEIAKLHKQKI 855
Query: 410 QKADEKASHDIFKARNKSFENVITIDLHGQHVKPAMKLLKL----HLVMVSYAQSV-QTL 464
+++A++ I + + N +DLH H A+ L L H+ ++ V + +
Sbjct: 856 DVFNQRAANCIMEVHRHTQNNPDLLDLHYLHTVEAISCLDLFLDRHITVLRNTTRVYKHV 915
Query: 465 RVITGCGSHGV-GKSKLKQSVIELVENEGLHWSEENRGTVLIKL 507
+ITG G H G S +K V + L W E N G + +K+
Sbjct: 916 FIITGRGLHSANGVSTIKNRVKARLGERRLRWQEVNPGLLRVKV 959
Score = 39 (18.8 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 14/45 (31%), Positives = 19/45 (42%)
Query: 18 PAPNNSSRDSNKPTATDGEEVQNDTKNQIIHSLTEAFGSVSLEEA 62
PA N +S SNK + + Q K II G +L E+
Sbjct: 78 PASNLNSNQSNKQFNSICQRAQAGHKLMIIMRGPSGSGKSTLAES 122
>TAIR|locus:2057775 [details] [associations]
symbol:CID7 "AT2G26280" species:3702 "Arabidopsis
thaliana" [GO:0003684 "damaged DNA binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] Pfam:PF01713
INTERPRO:IPR002625 EMBL:CP002685 GenomeReviews:CT485783_GR
SMART:SM00463 PROSITE:PS50828 EMBL:AC004484 InterPro:IPR013899
Pfam:PF08590 eggNOG:NOG286210 EMBL:BT030338 IPI:IPI00523347
PIR:E84658 RefSeq:NP_180196.1 UniGene:At.24275 UniGene:At.49354
ProteinModelPortal:O64843 SMR:O64843 STRING:O64843 PaxDb:O64843
GeneID:817168 KEGG:ath:AT2G26280 HOGENOM:HOG000241737
InParanoid:O64843 PhylomeDB:O64843 ProtClustDB:CLSN2683294
ArrayExpress:O64843 Genevestigator:O64843 Uniprot:O64843
Length = 567
Score = 145 (56.1 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 50/162 (30%), Positives = 78/162 (48%)
Query: 357 AKGDEYQVFRKDAKQHWNSMKSCYQKASAAYSKGEWGYAAHLSEQGKSLTKLAQKADEKA 416
A G+ Y R++A+ + +++A AY G A LS +G+ + A KA
Sbjct: 403 AVGNMYSELREEARDYARLRNVYFEQARQAYLVGNKALAKELSVKGQLHNMQMKAAHGKA 462
Query: 417 SHDIFKARN-----KSFENVITIDLHGQHVKPAMKLLKLHL-VMVSYAQSVQT---LRVI 467
I++ RN S N IDLHG HV A+++LK L V+ S A++ Q + +
Sbjct: 463 QEAIYRQRNPVGQGNSRGNERMIDLHGLHVSEALQVLKHELSVLRSTARATQERLQIYIC 522
Query: 468 TGCGSHGVGK---SKLKQSVIE-LVENEGLHWSEENRGTVLI 505
G G H G ++L +V L+E EGL +SE G + +
Sbjct: 523 VGTGHHTRGSRTPARLPVAVQRYLLEEEGLDYSEPQAGLLRV 564
>DICTYBASE|DDB_G0286103 [details] [associations]
symbol:DDB_G0286103 "small MutS related (smr) family
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0286103 Pfam:PF01713 INTERPRO:IPR002625
EMBL:AAFI02000085 SMART:SM00463 PROSITE:PS50828 RefSeq:XP_637898.1
ProteinModelPortal:Q54MD6 EnsemblProtists:DDB0220504 GeneID:8625408
KEGG:ddi:DDB_G0286103 eggNOG:euNOG30121 InParanoid:Q54MD6
OMA:ENSKGGA Uniprot:Q54MD6
Length = 159
Score = 111 (44.1 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 30/86 (34%), Positives = 45/86 (52%)
Query: 420 IFKARNKSFENVITIDLHGQHVKPAMKLLKLHLVMVSYAQSVQTLRVITGCGSHGVGKSK 479
IF+ NK + TIDLHG + A+ LK + + + L VITG GSH VG++K
Sbjct: 64 IFQLSNKDRDKY-TIDLHGLYSDHAILELKNRINQLIKEKYKGKLLVITGRGSHSVGEAK 122
Query: 480 LKQSVIELVENEGLHWSEENRGTVLI 505
+K V ++ L + E ++G I
Sbjct: 123 IKPRVNSFLKENSLLFEENSKGGAFI 148
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.128 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 511 476 0.00078 119 3 11 23 0.46 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 619 (66 KB)
Total size of DFA: 304 KB (2158 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 46.35u 0.12s 46.47t Elapsed: 00:00:02
Total cpu time: 46.35u 0.12s 46.47t Elapsed: 00:00:02
Start: Sat May 11 14:18:41 2013 End: Sat May 11 14:18:43 2013