Your job contains 1 sequence.
>043031
LSLVDIIRAAITRYLQFSLHGRPDLFCLDHFCGNSPTGFPEGGIKGVELVHLLLLSAEKI
GSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGRITSKGLKSEEVML
LLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKKIHIIDLATRTGSHCP
AIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDI
KDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEVESNDNLQTFED
RFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKIDGW
RDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTIDRNGECLIIGWKGIPHLSLSVWK
FHRE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043031
(424 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 443 8.4e-42 1
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 398 1.5e-39 2
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 414 9.9e-39 1
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 402 1.9e-37 1
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 395 1.0e-36 1
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 372 2.8e-34 1
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 230 7.1e-34 2
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 301 7.4e-31 2
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 326 3.0e-29 1
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 326 9.8e-29 1
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 323 2.3e-28 1
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 322 3.6e-28 1
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 314 3.9e-28 1
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 321 7.1e-28 1
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 318 1.3e-27 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 303 3.9e-25 1
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 301 1.0e-24 1
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 295 5.3e-24 1
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 278 1.1e-21 1
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 270 5.5e-21 1
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 268 6.3e-21 1
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 239 9.0e-18 1
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 238 3.6e-17 1
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 226 6.5e-16 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 140 1.1e-15 2
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 197 1.0e-12 1
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 183 3.3e-11 1
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 158 2.9e-08 1
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 154 9.4e-08 1
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 149 3.5e-07 1
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 132 1.3e-06 1
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 128 7.0e-05 1
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 113/383 (29%), Positives = 190/383 (49%)
Query: 46 GVELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLET 105
GV LVH L+ AE I + + A + V + + + ++ YF++AL R +
Sbjct: 177 GVRLVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFAQALARRIYRD- 235
Query: 106 GRITSKGLKSEEVMLLLHP--EEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSA 163
T++ +V ++P EEV+ + Y+ P+ + F QA++E V++A
Sbjct: 236 --YTAE----TDVCAAVNPSFEEVLE------MHFYESCPYLKFAHFTANQAILEAVTTA 283
Query: 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFA 223
+++H+IDL G PA+MQALA R G PP + T + +++ +LA FA
Sbjct: 284 RRVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGIGPPQTENSDSLQQLGWKLAQFA 343
Query: 224 ETINLPFPFN---ISFLTDIKD--FETN-EGEVVAVYSPVHLSHMIRKPNCLETFLTELR 277
+ + + F F L+D++ FET E E + V S L ++ + +E L ++
Sbjct: 344 QNMGVEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARSGSIEKLLNTVK 403
Query: 278 KINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQ 337
I P ++ V+E E+N N F DRF L ++ +LFD LE + +R+ E+Y G+
Sbjct: 404 AIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRV-MSEVYLGR 462
Query: 338 HIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTI 397
I N++A+EG +R+ H WR G L S + QA ++L +A G +
Sbjct: 463 QILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRV 522
Query: 398 DRNGECLIIGWKGIPHLSLSVWK 420
+ N CL+IGW+ P ++ S WK
Sbjct: 523 EENDGCLMIGWQTRPLITTSAWK 545
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 398 (145.2 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 96/311 (30%), Positives = 167/311 (53%)
Query: 122 LHPEE--VMASAKQAL-IACYQKVPFYQVTVFAGIQAVIENVSSAKKIHIIDLATRTGSH 178
++P + ++S L I Y+ P+ + F QA++E ++A+K+H+IDL G
Sbjct: 207 IYPRDDVALSSFSDTLQIHFYESCPYLKFAHFTANQAILEVFATAEKVHVIDLGLNHGLQ 266
Query: 179 CPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFN---IS 235
PA++QALA R PP+ ++T G S +E+ +L A TI + F F ++
Sbjct: 267 WPALIQALALRPNGPPDF-RLT---GIGYSLTDIQEVGWKLGQLASTIGVNFEFKSIALN 322
Query: 236 FLTDIKD--FETNEG-EVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEVESN 292
L+D+K + G E VAV S L ++ P ++ FL+ ++ I P +M V+E E+N
Sbjct: 323 NLSDLKPEMLDIRPGLESVAVNSVFELHRLLAHPGSIDKFLSTIKSIRPDIMTVVEQEAN 382
Query: 293 DNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIF 352
N F DRF +L ++ +LFD LE ++ +R+ E++ G+ I N++A EGE+R+
Sbjct: 383 HNGTVFLDRFTESLHYYSSLFDSLEGPPSQ---DRV-MSELFLGRQILNLVACEGEDRVE 438
Query: 353 GHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTIDRNGECLIIGWKGIP 412
H ++ WR+ F G + S + QA ++L +A ++ N CL++GW+ P
Sbjct: 439 RHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCLLLGWQTRP 498
Query: 413 HLSLSVWKFHR 423
++ S W+ +R
Sbjct: 499 LIATSAWRINR 509
Score = 261 (96.9 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 76/275 (27%), Positives = 129/275 (46%)
Query: 46 GVELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLET 105
GV LVH LL AE + A + HV +S+ ++++ YF++ L R
Sbjct: 149 GVRLVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGLARRIY--- 205
Query: 106 GRITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKK 165
RI + ++V L + + I Y+ P+ + F QA++E ++A+K
Sbjct: 206 -RIYPR----DDVALSSFSDTLQ-------IHFYESCPYLKFAHFTANQAILEVFATAEK 253
Query: 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAET 225
+H+IDL G PA++QALA R PP+ + T ++ ++ +
Sbjct: 254 VHVIDLGLNHGLQWPALIQALALRPNGPPDFRLTGIGYSLTDIQEVGWKLGQLASTIGVN 313
Query: 226 INLPFPFNISFLTDIKD--FETNEG-EVVAVYSPVHLSHMIRKPNCLETFLTELRKINPC 282
++ L+D+K + G E VAV S L ++ P ++ FL+ ++ I P
Sbjct: 314 FEFK-SIALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLLAHPGSIDKFLSTIKSIRPD 372
Query: 283 VMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLE 317
+M V+E E+N N F DRF +L ++ +LFD LE
Sbjct: 373 IMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLE 407
Score = 40 (19.1 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 107 RITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKV 142
RI S+ L S +++L +E AL+AC + V
Sbjct: 129 RIESE-LSSTRSVVVLDSQETGVRLVHALLACAEAV 163
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 108/383 (28%), Positives = 183/383 (47%)
Query: 46 GVELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLET 105
GV LVH L+ AE I A + + + + ++++ YF++AL R
Sbjct: 218 GVRLVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFAEALARRIY--- 274
Query: 106 GRITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKK 165
R++ ++ + ++ Q + Y+ P+ + F QA++E K+
Sbjct: 275 -RLSPP---QNQI------DHCLSDTLQ--MHFYETCPYLKFAHFTANQAILEAFEGKKR 322
Query: 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTP-SKQKFEEIENRLANFAE 224
+H+ID + G PA+MQALA R+G PP ++T + P + E+ +LA AE
Sbjct: 323 VHVIDFSMNQGLQWPALMQALALREGGPPTF-RLTGIGPPAPDNSDHLHEVGCKLAQLAE 381
Query: 225 TINLPFPFN---ISFLTDIK----DFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELR 277
I++ F + + L D+ + ++ E VAV S L ++ +P +E L ++
Sbjct: 382 AIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLGRPGGIEKVLGVVK 441
Query: 278 KINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQ 337
+I P + V+E ESN N F DRF +L ++ LFD LE N + E+Y G+
Sbjct: 442 QIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGVPN---SQDKVMSEVYLGK 498
Query: 338 HIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTI 397
I N++A EG +R+ H + W + F GL A L S + QA ++L F G +
Sbjct: 499 QICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRV 558
Query: 398 DRNGECLIIGWKGIPHLSLSVWK 420
+ + CL++GW P ++ S WK
Sbjct: 559 EESNGCLMLGWHTRPLITTSAWK 581
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 111/385 (28%), Positives = 185/385 (48%)
Query: 46 GVELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLET 105
GV LV L+ AE + + A + V +++ + ++ YF++AL R
Sbjct: 154 GVRLVQALVACAEAVQLENLSLADALVKRVGLLAASQAGAMGKVATYFAEALARRIY--- 210
Query: 106 GRITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKK 165
RI + EE++ + Y P+ + F QA++E V++++
Sbjct: 211 -RIHPSAAAIDPSF-----EEILQ------MNFYDSCPYLKFAHFTANQAILEAVTTSRV 258
Query: 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAET 225
+H+IDL G PA+MQALA R G PP ++T V G +++ +E+ +LA A+
Sbjct: 259 VHVIDLGLNQGMQWPALMQALALRPGGPPSF-RLTGV-GNPSNREGIQELGWKLAQLAQA 316
Query: 226 INLPFPFN---ISFLTDIKD--FETN-EGEVVAVYSPVHLSHMIRKPNCLETFLTELRKI 279
I + F FN L+D++ FET E E + V S L ++ +P +E L ++ +
Sbjct: 317 IGVEFKFNGLTTERLSDLEPDMFETRTESETLVVNSVFELHPVLSQPGSIEKLLATVKAV 376
Query: 280 NPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHI 339
P ++ V+E E+N N F DRF L ++ +LFD LE + +R+ E+Y G+ I
Sbjct: 377 KPGLVTVVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRV-MSEVYLGRQI 435
Query: 340 RNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTIDR 399
N++A+EG +RI H + WR G L S + QA L+L G ++
Sbjct: 436 LNLVATEGSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEE 495
Query: 400 NGECLIIGWKGIPHLSLSVWKFHRE 424
N L++ W+ P ++ S WK E
Sbjct: 496 NDGSLMLAWQTKPLIAASAWKLAAE 520
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 106/383 (27%), Positives = 184/383 (48%)
Query: 46 GVELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLET 105
GV LVH LL AE + + A + + + + ++++ YF++AL R
Sbjct: 166 GVRLVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIGAMRKVATYFAEALARRIY--- 222
Query: 106 GRITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKK 165
R++ S+ + + ++ Q + Y+ P+ + F QA++E K+
Sbjct: 223 -RLSP----SQSPI-----DHSLSDTLQ--MHFYETCPYLKFAHFTANQAILEAFQGKKR 270
Query: 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKF-EEIENRLANFAE 224
+H+ID + G PA+MQALA R G PP + ++T + P + E+ +LA+ AE
Sbjct: 271 VHVIDFSMSQGLQWPALMQALALRPGGPP-VFRLTGIGPPAPDNFDYLHEVGCKLAHLAE 329
Query: 225 TINLPFPFN---ISFLTDIK----DFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELR 277
I++ F + + L D+ + +E E VAV S L ++ +P ++ L +
Sbjct: 330 AIHVEFEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLLGRPGAIDKVLGVVN 389
Query: 278 KINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQ 337
+I P + V+E ESN N F DRF +L ++ LFD LE + E+Y G+
Sbjct: 390 QIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEGVPS---GQDKVMSEVYLGK 446
Query: 338 HIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTI 397
I N++A +G +R+ H + WR+ F G A + S + QA ++L F G +
Sbjct: 447 QICNVVACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGEGYRV 506
Query: 398 DRNGECLIIGWKGIPHLSLSVWK 420
+ + CL++GW P ++ S WK
Sbjct: 507 EESDGCLMLGWHTRPLIATSAWK 529
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 117/385 (30%), Positives = 180/385 (46%)
Query: 43 GIKGVELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFN 102
G ++L+ LLL AE + + AS L + + S G+ +R+V YF++AL+ R
Sbjct: 34 GAAAIKLLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRV- 92
Query: 103 LETGRITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKV-PFYQVTVFAGIQAVIENVS 161
+ + + SE+ + ++ +++ SA Q Y V P + + F QA+ + +
Sbjct: 93 ISSYLSGACSPLSEKPLTVVQSQKIF-SALQT----YNSVSPLIKFSHFTANQAIFQALD 147
Query: 162 SAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLAN 221
+HIIDL G PA+ LA+R P L+ + G S RLA+
Sbjct: 148 GEDSVHIIDLDVMQGLQWPALFHILASR----PRKLRSIRITGFGSSSDLLASTGRRLAD 203
Query: 222 FAETINLPFPFN-----ISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL 276
FA ++NLPF F+ I L D T +GE V V+ H + + N LET L L
Sbjct: 204 FASSLNLPFEFHPIEGIIGNLIDPSQLATRQGEAVVVHWMQHRLYDVTGNN-LET-LEIL 261
Query: 277 RKINPCVMVVIEVE-SNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYA 335
R++ P ++ V+E E S D+ +F RF L ++ ALFD L + R T E++
Sbjct: 262 RRLKPNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQIVL 321
Query: 336 GQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSC 395
G IRNI+A G R MK W++ +R G L QA L+L
Sbjct: 322 GTEIRNIVAHGGGRR--KRMK---WKEELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYT 376
Query: 396 TIDRNGECLIIGWKGIPHLSLSVWK 420
++ NG L +GWK + L+ S WK
Sbjct: 377 LVEENGT-LRLGWKDLSLLTASAWK 400
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 230 (86.0 bits), Expect = 7.1e-34, Sum P(2) = 7.1e-34
Identities = 52/152 (34%), Positives = 82/152 (53%)
Query: 270 ETFLTELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMT 329
++FL + ++P VMVV E +S+ N T +R +L+ + ALFDCLE + R +R+
Sbjct: 330 DSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIK 389
Query: 330 FEEMYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSF 389
E+M G+ I+NII+ EG ER H K++ W + G LS +++ QA +L+
Sbjct: 390 VEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQG- 448
Query: 390 ACG-SSCTIDRNGECLIIGWKGIPHLSLSVWK 420
CG I C +I W+ P S+S W+
Sbjct: 449 -CGFDGYRIKEESGCAVICWQDRPLYSVSAWR 479
Score = 206 (77.6 bits), Expect = 7.1e-34, Sum P(2) = 7.1e-34
Identities = 62/219 (28%), Positives = 109/219 (49%)
Query: 45 KGVELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLE 104
+G+ L+HLLL A + S A+ L+ + +S G+ +QR+ YF++AL R L+
Sbjct: 50 RGLYLIHLLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRI-LK 108
Query: 105 TGRITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAK 164
+ K L + + EE+ + L ++ P +V+ +A++E + K
Sbjct: 109 SWPGLYKALNATQTRTNNVSEEIHV---RRLF--FEMFPILKVSYLLTNRAILEAMEGEK 163
Query: 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAE 224
+H+IDL + A++QA +R PP L +IT G K+ E++ +RL AE
Sbjct: 164 MVHVIDLDASEPAQWLALLQAFNSRPEGPPHL-RIT---GVHHQKEVLEQMAHRLIEEAE 219
Query: 225 TINLPFPFN--ISFLT--DIKDFETNEGEVVAVYSPVHL 259
+++PF FN +S L +++ GE +AV S + L
Sbjct: 220 KLDIPFQFNPVVSRLDCLNVEQLRVKTGEALAVSSVLQL 258
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 301 (111.0 bits), Expect = 7.4e-31, Sum P(2) = 7.4e-31
Identities = 85/299 (28%), Positives = 141/299 (47%)
Query: 140 QKVPFYQVTVFAGIQAVIENVSSAKK--IHIIDLATRTGSHCPAIMQALATRQG---CPP 194
Q PF + QA+++ + +HI+DL G P +MQALA R PP
Sbjct: 151 QLTPFIRFGHLTANQAILDATETNDNGALHILDLDISQGLQWPPLMQALAERSSNPSSPP 210
Query: 195 ELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNI---------SFLTDIKDFET 245
L+IT G +RL FA+++ L F F+ L I+
Sbjct: 211 PSLRIT---GCGRDVTGLNRTGDRLTRFADSLGLQFQFHTLVIVEEDLAGLLLQIRLLAL 267
Query: 246 N--EGEVVAVYSPVHLSHMIRKPN--CLETFLTELRKINPCVMVVIEVESNDNLQTFEDR 301
+ +GE +AV + VH H I + + FL+ ++ +N ++ + E E+N +F +R
Sbjct: 268 SAVQGETIAV-NCVHFLHKIFNDDGDMIGHFLSAIKSLNSRIVTMAEREANHGDHSFLNR 326
Query: 302 FFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKIDGWR 361
F + H+ A+FD LE + R+T E+ + G+ I +++A+E ER H + + W
Sbjct: 327 FSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEILDVVAAEETERKQRHRRFEIWE 386
Query: 362 DLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTIDRNGECLIIGWKGIPHLSLSVWK 420
++ RFG V + S++L QA+L+LR + L +GW+ P S+S WK
Sbjct: 387 EMMKRFGFVNVPIGSFALSQAKLLLRLHYPSEGYNLQFLNNSLFLGWQNRPLFSVSSWK 445
Score = 77 (32.2 bits), Expect = 7.4e-31, Sum P(2) = 7.4e-31
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 49 LVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFN 102
L LL +A + F A L + SS G+ +RLVH F+KAL R N
Sbjct: 41 LRRLLFTAANFVSQSNFTAAQNLLSILSLNSSPHGDSTERLVHLFTKALSVRIN 94
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 326 (119.8 bits), Expect = 3.0e-29, P = 3.0e-29
Identities = 97/379 (25%), Positives = 170/379 (44%)
Query: 53 LLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGRITSKG 112
L+ A+ + A ++ + + S +G P+QRL Y + L ++ S G
Sbjct: 123 LVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGL-------VAQLASSG 175
Query: 113 LKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKKIHIIDLA 172
S L PE + Y+ P+++ + A+ E + ++HIID
Sbjct: 176 -SSIYKALNRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQ 234
Query: 173 TRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQK---FEEIENRLANFAETINLP 229
GS ++QA A R G PP + +IT + T + + + NRLA A+ N+P
Sbjct: 235 IGQGSQWVTLIQAFAARPGGPPRI-RITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVP 293
Query: 230 FPFN-ISF-LTDIK--DFETNEGEVVAVYSPVHLSHM----IRKPNCLETFLTELRKINP 281
F FN +S ++++K + GE +AV L HM + N + L ++ ++P
Sbjct: 294 FEFNSVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSP 353
Query: 282 CVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHIRN 341
V+ ++E ESN N F RF T+ ++ A+F+ ++V + R H R+ E+ + + N
Sbjct: 354 KVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVN 413
Query: 342 IIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTIDRNG 401
IIA EG +R+ H + WR F G LS + +LR+++ ++
Sbjct: 414 IIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYS--DKYRLEERD 471
Query: 402 ECLIIGWKGIPHLSLSVWK 420
L +GW ++ WK
Sbjct: 472 GALYLGWMHRDLVASCAWK 490
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 326 (119.8 bits), Expect = 9.8e-29, P = 9.8e-29
Identities = 103/390 (26%), Positives = 178/390 (45%)
Query: 42 GGIKGVELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERF 101
G +KGV L A+ + + + + + + S +G PVQRL Y + L R
Sbjct: 225 GDLKGV-----LYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARL 279
Query: 102 NLETGRITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVS 161
+G K L+ ++ PE + + L Y+ P+++ + A+ E V
Sbjct: 280 -ASSGSSIYKALRCKDPT---GPE--LLTYMHIL---YEACPYFKFGYESANGAIAEAVK 330
Query: 162 SAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQK---FEEIENR 218
+ +HIID G ++++AL R G PP + +IT + S + E + R
Sbjct: 331 NESFVHIIDFQISQGGQWVSLIRALGARPGGPPNV-RITGIDDPRSSFARQGGLELVGQR 389
Query: 219 LANFAETINLPFPFNISFL----TDIKDFETNEGEVVAVYSPVHLSHM----IRKPNCLE 270
L AE +PF F+ + L +I+ GE +AV P+ L HM + N +
Sbjct: 390 LGKLAEMCGVPFEFHGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRD 449
Query: 271 TFLTELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTF 330
L ++ ++P V+ ++E E+N N F RF T+ H+ A+F+ ++V + R H R+
Sbjct: 450 RLLRLVKHLSPNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINV 509
Query: 331 EEMYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFA 390
E+ + + N+IA EG ER H + WR F+ G LSS+ + +L S++
Sbjct: 510 EQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYS 569
Query: 391 CGSSCTIDRNGECLIIGWKGIPHLSLSVWK 420
T++ L +GWK P ++ W+
Sbjct: 570 --EKYTLEERDGALYLGWKNQPLITSCAWR 597
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 323 (118.8 bits), Expect = 2.3e-28, P = 2.3e-28
Identities = 108/388 (27%), Positives = 168/388 (43%)
Query: 47 VELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETG 106
V+L LL A+ + S RA+ L + +SS+ G+ QRL YF++AL R
Sbjct: 222 VDLRSLLTQCAQAVASFDQRRATDKLKEIRAHSSSNGDGTQRLAFYFAEALEARITGNIS 281
Query: 107 RITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKKI 166
S S ++ +++ + K + C P Y FA +++ E A K+
Sbjct: 282 PPVSNPFPSSTTSMV----DILKAYKLFVHTC----PIYVTDYFAANKSIYELAMKATKL 333
Query: 167 HIIDLATRTGSHCPAIMQALATRQGCPPELLKITMV----VGTTPSKQKFEEIENRLANF 222
HI+D G P +++AL+ R G PP +L++T + G PS + EE RL F
Sbjct: 334 HIVDFGVLYGFQWPCLLRALSKRPGGPP-MLRVTGIELPQAGFRPS-DRVEETGRRLKRF 391
Query: 223 AETINLPFPFNI---SFLT-DIKDFETNEGEVVAVYSPVHLSHMIRKPNCLE----TFLT 274
+ N+PF FN + T + + N GE V L + + L+ T L
Sbjct: 392 CDQFNVPFEFNFIAKKWETITLDELMINPGETTVVNCIHRLQYTPDETVSLDSPRDTVLK 451
Query: 275 ELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRC--HANRMTFEE 332
R INP + V E+ N F RF LFH+ +LFD + ++ + NR E
Sbjct: 452 LFRDINPDLFVFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNRSLLER 511
Query: 333 MYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACG 392
+ ++I+ EG ER WR R G A +S + +A+ I+R
Sbjct: 512 ELLVRDAMSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVRK-RYH 570
Query: 393 SSCTIDRNGECLIIGWKGIPHLSLSVWK 420
ID + ++ GWKG + S WK
Sbjct: 571 RDFVIDSDNNWMLQGWKGRVIYAFSCWK 598
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 322 (118.4 bits), Expect = 3.6e-28, P = 3.6e-28
Identities = 109/380 (28%), Positives = 172/380 (45%)
Query: 45 KGVELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLE 104
+G+ L+ LLL AE + + + A+ L + + S+ G QR+ YFS+A+ R L
Sbjct: 286 EGLHLLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMSARL-LN 344
Query: 105 TGRITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAK 164
+ L S M H + M SA Q V F T IQ E S
Sbjct: 345 SCLGIYAALPSRW-MPQTHSLK-MVSAFQVFNGISPLVKFSHFTANQAIQEAFEKEDS-- 400
Query: 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAE 224
+HIIDL G P + LA+R G PP + ++T + GT S + + RL++FA+
Sbjct: 401 -VHIIDLDIMQGLQWPGLFHILASRPGGPPHV-RLTGL-GT--SMEALQATGKRLSDFAD 455
Query: 225 TINLPFPF-----NISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKI 279
+ LPF F + L D + + E VAV+ H + + + +L L+++
Sbjct: 456 KLGLPFEFCPLAEKVGNL-DTERLNVRKREAVAVHWLQHSLYDVTGSDAHTLWL--LQRL 512
Query: 280 NPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHI 339
P V+ V+E + + + +F RF + ++ ALFD L R E+ + I
Sbjct: 513 APKVVTVVEQDLS-HAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSKEI 571
Query: 340 RNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTIDR 399
RN++A G R G +K + WR+ + G L+ + QA L+L F +D
Sbjct: 572 RNVLAVGGPSRS-GEVKFESWREKMQQCGFKGISLAGNAATQATLLLGMFPSDGYTLVDD 630
Query: 400 NGECLIIGWKGIPHLSLSVW 419
NG L +GWK + L+ S W
Sbjct: 631 NGT-LKLGWKDLSLLTASAW 649
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 97/349 (27%), Positives = 161/349 (46%)
Query: 80 STTGNPVQRLVHYFSKALRERFNLETGRITSKGLKSEEVMLLLHPEEVMASAKQALIACY 139
S +G P+QRL Y + L R +G K L+S E PE + +
Sbjct: 81 SISGEPIQRLGAYMLEGLVARL-AASGSSIYKSLQSRE------PESY--EFLSYVYVLH 131
Query: 140 QKVPFYQVTVFAGIQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKI 199
+ P+++ + A+ E + ++IHIID GS A++QA A R G P + +I
Sbjct: 132 EVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGSQWIALIQAFAARPGGAPNI-RI 190
Query: 200 TMVVGTTPSKQKFEEIENRLANFAETINLPFPFNI----SFLTDIKDFETNEGEVVAVYS 255
T V G ++ RL A+ ++PF FN S ++++ + +GE + V
Sbjct: 191 TGV-G---DGSVLVTVKKRLEKLAKKFDVPFRFNAVSRPSCEVEVENLDVRDGEALGVNF 246
Query: 256 PVHLSHM----IRKPNCLETFLTELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGA 311
L H+ + N + L ++ ++P V+ ++E E N N F RF TL ++ A
Sbjct: 247 AYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTA 306
Query: 312 LFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVE 371
+F+ ++V + R H R+ E+ + + NIIA EG ERI H + W+ F+ G
Sbjct: 307 MFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEP 366
Query: 372 AELSSWSLFQAELILRSFACGSSCTIDRNGECLIIGWKGIPHLSLSVWK 420
LSS +LR ++ G + +R+G L +GW +S WK
Sbjct: 367 YPLSSIISATIRALLRDYSNGYAIE-ERDG-ALYLGWMDRILVSSCAWK 413
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 321 (118.1 bits), Expect = 7.1e-28, P = 7.1e-28
Identities = 102/385 (26%), Positives = 181/385 (47%)
Query: 48 ELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGR 107
+L LL+L A+ + A+ L + ++SS GN +RL HYF+ +L R TG
Sbjct: 392 DLRTLLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSLEARL-AGTGT 450
Query: 108 ITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKKIH 167
L S++ +++ + + + C PF + + +++ ++A IH
Sbjct: 451 QIYTALSSKKTSAA----DMLKAYQTYMSVC----PFKKAAIIFANHSMMRFTANANTIH 502
Query: 168 IIDLATRTGSHCPAIMQALA-TRQGCPPELLKITMVV----GTTPSKQKFEEIENRLANF 222
IID G PA++ L+ +R G P+L +IT + G P+ + +E +RLA +
Sbjct: 503 IIDFGISYGFQWPALIHRLSLSRPGGSPKL-RITGIELPQRGFRPA-EGVQETGHRLARY 560
Query: 223 AETINLPFPFNI---SFLT-DIKDFETNEGEVVAVYSPVHLSHMIRKPNCL----ETFLT 274
+ N+PF +N + T ++D + +GE V V S +++ + + + L
Sbjct: 561 CQRHNVPFEYNAIAQKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDETVLVNSPRDAVLK 620
Query: 275 ELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMY 334
+RKINP V + + N N F RF LFH+ A+FD + + R R+ +E+ +
Sbjct: 621 LIRKINPNVFIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEF 680
Query: 335 AGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSS 394
G+ I N++A EG ER+ W+ R G + L + +L + + +
Sbjct: 681 YGREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIEN-GYDKN 739
Query: 395 CTIDRNGECLIIGWKGIPHLSLSVW 419
+D+NG L+ GWKG + S+W
Sbjct: 740 FDVDQNGNWLLQGWKGRIVYASSLW 764
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 318 (117.0 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 110/399 (27%), Positives = 175/399 (43%)
Query: 33 GNSPTGFPEGGIKGVELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHY 92
G G G + V+L LL+ A+ + + A L + +S+ G+ QRL H
Sbjct: 328 GRGGGGGQNGKKEVVDLRSLLIHCAQAVAADDRRCAGQLLKQIRLHSTPFGDGNQRLAHC 387
Query: 93 FSKALRERFNLETGRITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAG 152
F+ L R TG KG+ S+ + A Q +AC PF +++ F
Sbjct: 388 FANGLEARL-AGTGSQIYKGIVSKP-----RSAAAVLKAHQLFLAC---CPFRKLSYFIT 438
Query: 153 IQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPS---K 209
+ + + V +++++H+ID G P ++ + G P ++IT + P
Sbjct: 439 NKTIRDLVGNSQRVHVIDFGILYGFQWPTLIHRFSM-YGSPK--VRITGIEFPQPGFRPA 495
Query: 210 QKFEEIENRLANFAETINLPFPFN-ISFLTD---IKDFETNEGEVVAV---YSPVHL-SH 261
Q+ EE RLA +A+ +PF + I+ D ++D + + E+ V Y +L
Sbjct: 496 QRVEETGQRLAAYAKLFGVPFEYKAIAKKWDAIQLEDLDIDRDEITVVNCLYRAENLHDE 555
Query: 262 MIRKPNCLETFLTELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMN 321
++ +C +T L + KINP + V V N F RF LFHF ++FD LE +
Sbjct: 556 SVKVESCRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVP 615
Query: 322 RCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQ 381
R RM E G+ N+IA EG ER+ W R GLV+ S+ +
Sbjct: 616 REDEERMFLEMEVFGREALNVIACEGWERVERPETYKQWHVRAMRSGLVQVPFDP-SIMK 674
Query: 382 AELILRSFACGSSCTIDRNGECLIIGWKGIPHLSLSVWK 420
L ID++ L+ GWKG ++LSVWK
Sbjct: 675 TSLHKVHTFYHKDFVIDQDNRWLLQGWKGRTVMALSVWK 713
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 303 (111.7 bits), Expect = 3.9e-25, P = 3.9e-25
Identities = 102/375 (27%), Positives = 176/375 (46%)
Query: 59 KIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGRITSKGLKSEEV 118
+I + AS L + + S G+P +R+ YF++AL R + + +S +E++
Sbjct: 226 RISDSDPNEASKTLLQIRESVSELGDPTERVAFYFTEALSNRLSPNSPATSSSSSSTEDL 285
Query: 119 MLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKKIHIIDLATRTGSH 178
+L S K AC P+ + QA++E + KIHI+D G
Sbjct: 286 IL---------SYKTLNDAC----PYSKFAHLTANQAILEATEKSNKIHIVDFGIVQGIQ 332
Query: 179 CPAIMQALATRQGCPPELLKITMV----VGTTPSKQKFEEIENRLANFAETINLPFPFNI 234
PA++QALATR P ++++ + +G +P NRL +FA+ ++L F F I
Sbjct: 333 WPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSLIAT-GNRLRDFAKVLDLNFDF-I 390
Query: 235 SFLTDI-----KDFETNEGEVVAVYSPVHLSHMIRK-PNCLETFLTELRKINPCVMVVIE 288
LT I F + EV+AV + L ++ + P ++T L + +NP V+ + E
Sbjct: 391 PILTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLLDETPTIVDTALRLAKSLNPRVVTLGE 450
Query: 289 VESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASE-- 346
E + N F +R L + A+F+ LE + R R+ E G+ I +I E
Sbjct: 451 YEVSLNRVGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISGLIGPEKT 510
Query: 347 GEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTIDRNGECLI- 405
G R K + WR L G +LS++++ QA+++L ++ + +I + I
Sbjct: 511 GIHRERMEEK-EQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYSIVESKPGFIS 569
Query: 406 IGWKGIPHLSLSVWK 420
+ W +P L+LS W+
Sbjct: 570 LAWNDLPLLTLSSWR 584
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 301 (111.0 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 99/368 (26%), Positives = 166/368 (45%)
Query: 48 ELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGN-PVQRLVHYFSKALRERFNLETG 106
ELV+LL + I S+ + F+ +S G P+ RL+ Y+ +AL L
Sbjct: 273 ELVNLLTGCLDAIRSRNIAAINHFIARTGDLASPRGRTPMTRLIAYYIEALA----LRVA 328
Query: 107 RITSKGLKSEEVMLLLHPEE----VMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSS 162
R+ + + P E V + AL Q P + F + ++
Sbjct: 329 RMWP------HIFHIAPPREFDRTVEDESGNALRFLNQVTPIPKFIHFTANEMLLRAFEG 382
Query: 163 AKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANF 222
+++HIID + G P+ Q+LA+R PP ++IT G SK + E +RL F
Sbjct: 383 KERVHIIDFDIKQGLQWPSFFQSLASRIN-PPHHVRIT---GIGESKLELNETGDRLHGF 438
Query: 223 AETINLPFPFN--ISFLTDIKDF--ETNEGEVVAVYSPVHLSHMIRKPN--CLETFLTEL 276
AE +NL F F+ + L D++ + EGE VAV + + + + FL +
Sbjct: 439 AEAMNLQFEFHPVVDRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYDGTGAAIRDFLGLI 498
Query: 277 RKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAG 336
R NP +V+ E E+ N + E R +L ++ A+FD + + R+ EEM G
Sbjct: 499 RSTNPIALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFG 558
Query: 337 QHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSS-- 394
+ IRNI+A EG R H+ WR + + G +S + Q++++LR + +
Sbjct: 559 REIRNIVACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSEREVLQSKMLLRMYGSDNEGF 618
Query: 395 CTIDRNGE 402
++R+ E
Sbjct: 619 FNVERSDE 626
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 295 (108.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 115/410 (28%), Positives = 176/410 (42%)
Query: 30 HFCGNSPTGFPEGGIKGVELVHLLLLSAEKIGSQQFDRASIF--LDHVDKYSSTTGNPVQ 87
H G+S + + V++ +LL+ A+ + S FD+ F L + ++SS G+ Q
Sbjct: 190 HVKGSSNRYKQQKSDQPVDMRNLLMQCAQAVAS--FDQRRAFEKLKEIREHSSRHGDATQ 247
Query: 88 RLVHYFSKALRERFNLETGRITS--KGLKSEEVML-LLHPEEVMASAKQALIACYQKVPF 144
RL ++F++AL R TG +T+ S M+ +L + A LI CY
Sbjct: 248 RLGYHFAEALEARI---TGTMTTPISATSSRTSMVDILKAYKGFVQACPTLIMCY----- 299
Query: 145 YQVTVFAGIQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVV- 203
F + + E S A +HIID G P ++QAL+ R PP LL++T +
Sbjct: 300 -----FTANRTINELASKATTLHIIDFGILYGFQWPCLIQALSKRDIGPP-LLRVTGIEL 353
Query: 204 ---GTTPSKQKFEEIENRLANFAETINLPFPFNISFLTD------IKDFETNEGEVVAVY 254
G PS ++ EE RL F + N+PF + SF+ + D N GE V
Sbjct: 354 PQSGFRPS-ERVEETGRRLKRFCDKFNVPFEY--SFIAKNWENITLDDLVINSGETTVVN 410
Query: 255 SPVHLSHMIRKPNCL----ETFLTELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFG 310
+ L + + L +T L R INP + V E+ N F RF LFH
Sbjct: 411 CILRLQYTPDETVSLNSPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCS 470
Query: 311 ALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLV 370
+LFD E ++ R E + ++IA EG ER W+ R G
Sbjct: 471 SLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFR 530
Query: 371 EAELSSWSLFQAELILRSFACGSSCTIDRNGECLIIGWKGIPHLSLSVWK 420
A+LS + + I++ ID + + GWKG ++S WK
Sbjct: 531 PAKLSKQIVKDGKEIVKE-RYHKDFVIDNDNHWMFQGWKGRVLYAVSCWK 579
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 278 (102.9 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 100/395 (25%), Positives = 173/395 (43%)
Query: 45 KGVELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLE 104
+ V+ LL L A+ + + A L + K S G+ QRL H+F+ AL R
Sbjct: 311 RAVDFRTLLTLCAQSVSAGDKITADDLLRQIRKQCSPVGDASQRLAHFFANALEARLEGS 370
Query: 105 TGRITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAK 164
TG + S + + A ++ PF + F + +++ A
Sbjct: 371 TGTMIQSYYDS-----ISSKKRTAAQILKSYSVFLSASPFMTLIYFFSNKMILDAAKDAS 425
Query: 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPEL--LKITMVV----GTTPSKQKFEEIENR 218
+HI+D G P +Q L+ P L L+IT + G P+ ++ ++ R
Sbjct: 426 VLHIVDFGILYGFQWPMFIQHLSKSN---PGLRKLRITGIEIPQHGLRPT-ERIQDTGRR 481
Query: 219 LANFAETINLPFPFNI----SFLT-DIKDFETNEGEVVAVYSPV---HLSHMIR-KPNC- 268
L + + +PF +N ++ T +++F+ EV+AV + + +L +I + +C
Sbjct: 482 LTEYCKRFGVPFEYNAIASKNWETIKMEEFKIRPNEVLAVNAVLRFKNLRDVIPGEEDCP 541
Query: 269 LETFLTELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRM 328
+ FL +R +NP V + V + N F RF LFH+ ALFD +++ + R+
Sbjct: 542 RDGFLKLIRDMNPNVFLSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKENPERI 601
Query: 329 TFEEMYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGL----VEAELSSWSLFQAEL 384
FE + G+ + N+IA EG +R+ W+ R G VEAEL LF+ ++
Sbjct: 602 HFEGEFYGREVMNVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVEAELVQ--LFREKM 659
Query: 385 ILRSFACGSSCTIDRNGECLIIGWKGIPHLSLSVW 419
+ + +D + + GWKG S S W
Sbjct: 660 --KKWGYHKDFVLDEDSNWFLQGWKGRILFSSSCW 692
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 270 (100.1 bits), Expect = 5.5e-21, P = 5.5e-21
Identities = 94/357 (26%), Positives = 171/357 (47%)
Query: 80 STTGNPVQRLVHYFSKALRERFNLETGRITSKGLKSEEVMLLLHPEEVMASAKQALIACY 139
S +G+P+QR+ +YF++AL + ET +S S E +L S K AC
Sbjct: 203 SESGDPIQRVGYYFAEALSHK---ETESPSSSSSSSLEDFIL--------SYKTLNDAC- 250
Query: 140 QKVPFYQVTVFAGIQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKI 199
P+ + QA++E + + IHI+D G A++QALATR P ++I
Sbjct: 251 ---PYSKFAHLTANQAILEATNQSNNIHIVDFGIFQGIQWSALLQALATRSSGKPTRIRI 307
Query: 200 TMV----VGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIK-----DFETNEGEV 250
+ + +G +P NRL +FA ++L F F LT I+ F + EV
Sbjct: 308 SGIPAPSLGDSPGPSLIAT-GNRLRDFAAILDLNFEF-YPVLTPIQLLNGSSFRVDPDEV 365
Query: 251 VAVYSPVHLSHMIRKP-NCLETFLTELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHF 309
+ V + L ++ + + T L R +NP ++ + E E + N F +R +L +
Sbjct: 366 LVVNFMLELYKLLDETATTVGTALRLARSLNPRIVTLGEYEVSLNRVEFANRVKNSLRFY 425
Query: 310 GALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERI----FGHMKI-DGWRDLF 364
A+F+ LE ++R R+ E + G+ I +++ S+ + FG M+ + WR L
Sbjct: 426 SAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRFGLMEEKEQWRVLM 485
Query: 365 NRFGLVEAELSSWSLFQAELILRSFACGSSCTIDRNGECLI-IGWKGIPHLSLSVWK 420
+ G + S++++ QA+L+L ++ + ++ + I + W +P L++S W+
Sbjct: 486 EKAGFEPVKPSNYAVSQAKLLLWNYNYSTLYSLVESEPGFISLAWNNVPLLTVSSWR 542
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 268 (99.4 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 107/395 (27%), Positives = 177/395 (44%)
Query: 45 KGVELVHLLLLSAE-KIGSQQF-DRASIFLDHV-DKYSSTTGNPVQRLVHYFSKALRERF 101
KG+ LVHLL+ +A+ G+ + + + L + D S ++RL +F+ L +
Sbjct: 100 KGLRLVHLLVAAADASTGANKSRELTRVILARLKDLVSPGDRTNMERLAAHFTNGLSKL- 158
Query: 102 NLETGRITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVS 161
LE + ++V + + + SA + L P+ QA++E V
Sbjct: 159 -LERDSVLCPQQHRDDV----YDQADVISAFELL---QNMSPYVNFGYLTATQAILEAVK 210
Query: 162 SAKKIHIIDLATRTGSHCPAIMQALATRQGCPP-ELLKITMVVGTTPSKQKF---EEIEN 217
++IHI+D G ++MQAL +R P + L+IT + T K+ +E
Sbjct: 211 YERRIHIVDYDINEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGR 270
Query: 218 RLANFAETINLPFPFNISFLTDIKDFETNE-----GEVVAVYSPVHLSHMIRK-PNCLET 271
RL FA++I PF + L D F T+ GE V + +HL + P+ + +
Sbjct: 271 RLTAFADSIGQPFSYQHCKL-DTNAFSTSSLKLVRGEAVVINCMLHLPRFSHQTPSSVIS 329
Query: 272 FLTELRKINPCVMVVI--EVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMT 329
FL+E + +NP ++ ++ EV N Q F RF L F A+FD LE ++ + R
Sbjct: 330 FLSEAKTLNPKLVTLVHEEVGLMGN-QGFLYRFMDLLHQFSAIFDSLEAGLSIANPARGF 388
Query: 330 FEEMYAGQHIRN----IIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELI 385
E ++ G + N I A++ E F W G E+S + QA+L+
Sbjct: 389 VERVFIGPWVANWLTRITANDAEVESFA-----SWPQWLETNGFKPLEVSFTNRCQAKLL 443
Query: 386 LRSFACGSSCT-IDRNGECLIIGWKGIPHLSLSVW 419
L F G + +NG L++GWK +S S W
Sbjct: 444 LSLFNDGFRVEELGQNG--LVLGWKSRRLVSASFW 476
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 239 (89.2 bits), Expect = 9.0e-18, P = 9.0e-18
Identities = 97/410 (23%), Positives = 174/410 (42%)
Query: 35 SPTGFPEGG-IKGVE----LVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRL 89
+PT FP ++G + LLL A I S L ++ + G+ QRL
Sbjct: 8 NPTRFPSPKPLRGCGDANFMEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRL 67
Query: 90 VHYFSKALRERFNLETGRITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTV 149
F +AL R +T ++S + L +E+ + L A P+++
Sbjct: 68 TSAFLRALLSRAVSKTPTLSST------ISFLPQADELHRFSVVELAAFVDLTPWHRFGF 121
Query: 150 FAGIQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTT--P 207
A A++ V +HI+DL+ P ++ A+A+R PP LLK+T+V + P
Sbjct: 122 IAANAAILTAVEGYSTVHIVDLSLTHCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFP 181
Query: 208 S--KQKFEEIENRLANFAETINLPFPFNI----------SFLTDIKDFETNEGEVVAVYS 255
+EE+ ++L NFA T N+ F I S L ++ + ++ E + V
Sbjct: 182 PFINISYEELGSKLVNFATTRNITMEFTIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNC 241
Query: 256 PVHLSHMIRKP-----NCLET-FLTELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHF 309
+ L ++ +P + L T FL +LR +NP ++ +IE + + + +R +F
Sbjct: 242 HMMLRYIPEEPLTSSSSSLRTVFLKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYF 301
Query: 310 GALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGL 369
FD + M+ R +E + + I N++A EG ER+ W +
Sbjct: 302 WIPFDTTDTFMSE---QRRWYEAEISWK-IENVVAKEGAERVERTETKRRWIERMREAEF 357
Query: 370 VEAELSSWSLFQAELILRSFACGSSCTIDRNGECLIIGWKGIPHLSLSVW 419
+ ++ + +L A G + + E L++ WKG + +VW
Sbjct: 358 GGVRVKEDAVADVKAMLEEHAVGWGMKKEDDDESLVLTWKGHSVVFATVW 407
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 238 (88.8 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 90/381 (23%), Positives = 160/381 (41%)
Query: 52 LLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGRITSK 111
+L+ A + + + A ++ + + S G+P QR+ Y + L R +G+ +
Sbjct: 225 ILISCARALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARM-AASGKFIYR 283
Query: 112 GLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKKIHIIDL 171
LK +E P + +A Q L ++ P ++ A A++E + +++HIID
Sbjct: 284 ALKCKEP-----PSDERLAAMQVL---FEVCPCFKFGFLAANGAILEAIKGEEEVHIIDF 335
Query: 172 ATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQK----FEEIENRLANFAETIN 227
G+ +++++A G P L ++T + S Q+ I RL AE
Sbjct: 336 DINQGNQYMTLIRSIAELPGKRPRL-RLTGI-DDPESVQRSIGGLRIIGLRLEQLAEDNG 393
Query: 228 LPFPFN-ISFLTDIKDFET---NEGEVVAVYSPVHLSHM----IRKPNCLETFLTELRKI 279
+ F F + T I T GE + V L HM + N + L ++ +
Sbjct: 394 VSFKFKAMPSKTSIVSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRDELLHMVKSL 453
Query: 280 NPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHI 339
NP ++ V+E + N N F RF ++ A+F+ L++ + R RM E + I
Sbjct: 454 NPKLVTVVEQDVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDI 513
Query: 340 RNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTIDR 399
NI+A EGEERI + WR G +S+ + +++ C +
Sbjct: 514 VNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKEE 573
Query: 400 NGECLIIGWKGIPHLSLSVWK 420
GE L W+ + S W+
Sbjct: 574 MGE-LHFCWEEKSLIVASAWR 593
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 226 (84.6 bits), Expect = 6.5e-16, P = 6.5e-16
Identities = 88/330 (26%), Positives = 147/330 (44%)
Query: 9 AAITRYLQFSLHGRPDLFCLDHFCGNSPTGFP-EGGIKGVELVHLLLLSAEKIGSQQFDR 67
A + Y H P F + +P F K + V LL +A + R
Sbjct: 108 ALASPYSSSGHHNDPSAFSIPQ----TPPSFDFSANAKWADSV--LLEAARAFSDKDTAR 161
Query: 68 ASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGRITSKGLKSEEVMLLLHPEEV 127
A L +++ SS G+ Q+L YF +AL FN R+T G + M+ E
Sbjct: 162 AQQILWTLNELSSPYGDTEQKLASYFLQAL---FN----RMTGSGERCYRTMVTAAATEK 214
Query: 128 MAS--AKQALIACYQKV-PFYQVTVFAGIQAVIENVSSAKKIHIIDLATRTGSHCPAIMQ 184
S + + + +Q+V P+ A A++E V KIHI+D+++ + P +++
Sbjct: 215 TCSFESTRKTVLKFQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISSTFCTQWPTLLE 274
Query: 185 ALATRQGCPPELLKITMVVGT------TPSKQKFEEIENRLANFAETINLPFPFNI-SFL 237
ALATR P L T+VV T S + +EI NR+ FA + +PF FNI +
Sbjct: 275 ALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGVPFKFNIIHHV 334
Query: 238 TDIKDFETNE-----GEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEVESN 292
D+ +F+ NE EV+A+ + + + + + ++ R++ P ++ V+E E++
Sbjct: 335 GDLSEFDLNELDVKPDEVLAINCVGAMHGIASRGSPRDAVISSFRRLRPRIVTVVEEEAD 394
Query: 293 ---DNLQTFEDRFFGTLFHFGALFDCLEVC 319
+ F+D F L FG VC
Sbjct: 395 LVGEEEGGFDDEF---LRGFGECLRWFRVC 421
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 140 (54.3 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 79 SSTTGNPVQRLVHYFSKALRERFNLETGRITSKGLKSEEVMLLLHPEEVMASAKQALIAC 138
+S G+ RL ++F++AL R + + G G +++ ++ A +A
Sbjct: 81 ASPRGDAADRLAYHFARALALRVDAKAGH----G------HVVVGGGAARPASSGAYLAF 130
Query: 139 YQKVPFYQVTVFAGIQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGC---PPE 195
Q PF + QA++E V A+++HI+DL G P ++QA+A R PPE
Sbjct: 131 NQIAPFLRFAHLTANQAILEAVDGARRVHILDLDAVHGVQWPPLLQAIAERADPALGPPE 190
Query: 196 LLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPF 232
+ V G + NRL FA +I+LPF F
Sbjct: 191 V----RVTGAGADRDTLLRTGNRLRAFARSIHLPFHF 223
Score = 131 (51.2 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 45/184 (24%), Positives = 80/184 (43%)
Query: 244 ETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEVESN------DNLQT 297
E + E +AV + L H + + L FL ++ ++P V+ + E E+ D++
Sbjct: 259 EFHPDETLAVNCVMFL-HNLAGHDELAAFLKWVKAMSPAVVTIAEREAGGGGGGGDHIDD 317
Query: 298 FEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKI 357
R + H+ A+F+ LE + R+ E+ G+ I + G G I
Sbjct: 318 LPRRVGVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAVGPSGGRWWRG---I 374
Query: 358 DGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTI-DRNGECLIIGWKGIPHLSL 416
+ W G LS++++ QA L+LR + + G C + GW+ P LS+
Sbjct: 375 ERWGGAARAAGFAARPLSAFAVSQARLLLRLHYPSEGYLVQEARGACFL-GWQTRPLLSV 433
Query: 417 SVWK 420
S W+
Sbjct: 434 SAWQ 437
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 197 (74.4 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 83/389 (21%), Positives = 163/389 (41%)
Query: 46 GVELVHLLLLSAEKIGSQQFDRASIFLDHVD-KYSSTTGNPVQRLVHYFSKALRERFNLE 104
G + + L+ + + S + A + L ++ + S G P+QR YF +AL F
Sbjct: 119 GFDFIEDLIRVVDCVESDELQLAQVVLSRLNQRLRSPAGRPLQRAAFYFKEALGS-FLTG 177
Query: 105 TGRITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAK 164
+ R + E++ + + A + + I+ +P + + F QA+++++SS
Sbjct: 178 SNRNPIRLSSWSEIV-----QRIRAIKEYSGIS---PIPLF--SHFTANQAILDSLSSQS 227
Query: 165 K---IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLAN 221
+H++D G ++M+ + T + L++T VV + + ++ L
Sbjct: 228 SSPFVHVVDFEIGFGGQYASLMREI-TEKSVSGGFLRVTAVVAEECAVET-RLVKENLTQ 285
Query: 222 FAETINLPFPFNI----SF-LTDIKDFETNEGE-VVAVYSPVHLSHMIRKPNCLETFLTE 275
FA + + F +F + K EGE V + SP + R+ + + F+
Sbjct: 286 FAAEMKIRFQIEFVLMKTFEMLSFKAIRFVEGERTVVLISPA----IFRRLSGITDFVNN 341
Query: 276 LRKINPCVMVVIEVESNDNLQ---TFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEE 332
LR+++P V+V ++ E + +F F L + + + L+ + E
Sbjct: 342 LRRVSPKVVVFVDSEGWTEIAGSGSFRREFVSALEFYTMVLESLDAAAPPGDLVKKIVEA 401
Query: 333 MYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACG 392
I + + + R G M WR+ F G+ +LS ++ FQAE +L
Sbjct: 402 FVLRPKISAAVETAADRRHTGEMT---WREAFCAAGMRPIQLSQFADFQAECLLEKAQVR 458
Query: 393 SSCTIDRNGECLIIGWKGIPHLSLSVWKF 421
R GE L++ W G ++ S W+F
Sbjct: 459 GFHVAKRQGE-LVLCWHGRALVATSAWRF 486
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 183 (69.5 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 89/424 (20%), Positives = 177/424 (41%)
Query: 17 FSLHGRPDLFCLDHFCG-NSPTGFPEGGIK-----GVELVHLLLLSAEKIGSQQFDRASI 70
F+L PD+ D + G N TG+ + G + + L+ + I S + A +
Sbjct: 61 FNLPVFPDIDSSDVYPGPNQITGYGFNSLDSVDNGGFDYIEDLIRVVDCIESDELHLAHV 120
Query: 71 FLDHVDKYSSTT-GNPVQRLVHYFSKALRERFNLETGRITSKGLKSEEVMLLLHPEEVMA 129
L +++ T+ G P+QR YF +AL +L TG ++ +++ +++ A
Sbjct: 121 VLSQLNQRLQTSAGRPLQRAAFYFKEALG---SLLTGTNRNQLFSWSDIV-----QKIRA 172
Query: 130 SAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKK---IHIIDLATRTGSHCPAIMQAL 186
+ + I+ +P + + F QA+++++SS +H++D G ++M+ +
Sbjct: 173 IKEFSGIS---PIPLF--SHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASLMREI 227
Query: 187 ATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLT--DIKDFE 244
A + L++T VV + + ++ L FA + + F + +I F+
Sbjct: 228 AEKSA-NGGFLRVTAVVAEDCAVET-RLVKENLTQFAAEMKIRFQIEFVLMKTFEILSFK 285
Query: 245 TN---EGE-VVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEVESNDNLQ---T 297
+GE V + SP + R+ + F+ L +++P V+V ++ E +
Sbjct: 286 AIRFVDGERTVVLISPA----IFRRVIGIAEFVNNLGRVSPNVVVFVDSEGCTETAGSGS 341
Query: 298 FEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKI 357
F F + + + L+ + E I + + R G M
Sbjct: 342 FRREFVSAFEFYTMVLESLDAAAPPGDLVKKIVETFLLRPKISAAVETAANRRSAGQMT- 400
Query: 358 DGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTIDRNGECLIIGWKGIPHLSLS 417
WR++ G+ +LS ++ FQAE +L R GE L++ W G ++ S
Sbjct: 401 --WREMLCAAGMRPVQLSQFADFQAECLLEKAQVRGFHVAKRQGE-LVLCWHGRALVATS 457
Query: 418 VWKF 421
W+F
Sbjct: 458 AWRF 461
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 158 (60.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 90/381 (23%), Positives = 149/381 (39%)
Query: 47 VELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETG 106
V + L+ +AE I S I + SS G P++R YF +AL NL
Sbjct: 203 VGITEQLVKAAEVIESDTCLAQGILARLNQQLSSPVGKPLERAAFYFKEALN---NL--- 256
Query: 107 RITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKV-PFYQVTVFAGIQAVIENVSSAKK 165
V L+P ++ K A + ++ P Q F QA++E+ +
Sbjct: 257 --------LHNVSQTLNPYSLIF--KIAAYKSFSEISPVLQFANFTSNQALLESFHGFHR 306
Query: 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQ-KFEEIENRLANFAE 224
+HIID G ++MQ L R P LKIT+ Q + ++ L +FA
Sbjct: 307 LHIIDFDIGYGGQWASLMQELVLRDNAAPLSLKITVFASPANHDQLELGFTQDNLKHFAS 366
Query: 225 TINLPFPFNI---SFLTDIKDFETNEGEVVAV-YSPVHLSHMIRKPNCLETFLTELRKIN 280
IN+ + L I ++E E VAV S SH+ P L F+ L +
Sbjct: 367 EINISLDIQVLSLDLLGSISWPNSSEKEAVAVNISAASFSHL---PLVLR-FVKHL---S 419
Query: 281 PCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHIR 340
P ++V + F + +L ALF+ L+ A + E I
Sbjct: 420 PTIIVCSDRGCERTDLPFSQQLAHSLHSHTALFESLDAVNANLDAMQK-IERFLIQPEIE 478
Query: 341 NIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAE-LILRSFACGSSCTIDR 399
++ I M W+ +F + G S+++ QAE L+ R+ G +++
Sbjct: 479 KLVLDRSRP-IERPMMT--WQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGFH--VEK 533
Query: 400 NGECLIIGWKGIPHLSLSVWK 420
L++ W+ + +S W+
Sbjct: 534 KHNSLLLCWQRTELVGVSAWR 554
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 154 (59.3 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 78/316 (24%), Positives = 132/316 (41%)
Query: 122 LHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKKIHIIDLATRTGSHCPA 181
L P + + A A + PF Q F Q ++E+ +IHI+D G +
Sbjct: 317 LSPPQNLIFRIAAYRAFSETSPFLQFVNFTANQTILESFEGFDRIHIVDFDIGYGGQWAS 376
Query: 182 IMQALA---TRQGCPPELLKITMVVGTTPSKQKFEE--IENRLANFAETINLPFPF---N 233
++Q LA R P L KIT + +FE E L +FA + F N
Sbjct: 377 LIQELAGKRNRSSSAPSL-KITAFASPSTVSDEFELRFTEENLRSFAGETGVSFEIELLN 435
Query: 234 ISFLTD-----IKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIE 288
+ L + + F ++E E +AV P+ S M+ L L L++I+P V+V +
Sbjct: 436 MEILLNPTYWPLSLFRSSEKEAIAVNLPI--SSMVS--GYLPLILRFLKQISPNVVVCSD 491
Query: 289 VESNDNLQT-FEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQ-HIRNIIASE 346
+ N F + L ++ +L + L+ N +A T E + Q I+ ++ +
Sbjct: 492 RSCDRNNDAPFPNGVINALQYYTSLLESLD-SGNLNNAEAATSIERFCVQPSIQKLLTN- 549
Query: 347 GEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELIL-RSFACGSSCTIDRNGE-CL 404
R + WR LF + G LS + QAE +L R+ G ++ L
Sbjct: 550 ---RYRWMERSPPWRSLFGQCGFTPVTLSQTAETQAEYLLQRNPMRGFHLEKRQSSSPSL 606
Query: 405 IIGWKGIPHLSLSVWK 420
++ W+ +++S WK
Sbjct: 607 VLCWQRKELVTVSAWK 622
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 149 (57.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 88/367 (23%), Positives = 154/367 (41%)
Query: 72 LDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGRITSKGLKSEEVMLLLHPEEVMASA 131
L+H SS +P QR + ++AL +L + +E L+ PE ++
Sbjct: 300 LNHHLNTSSNHKSPFQRAASHIAEAL---LSL---------IHNESSPPLITPENLILRI 347
Query: 132 KQALIACYQKVPFYQVTVFAGIQAVIE--NVSSAKKIHIIDLATRTGSHCPAIMQALAT- 188
A + + PF Q F Q+++E N S +IHIID G ++MQ LA+
Sbjct: 348 A-AYRSFSETSPFLQFVNFTANQSILESCNESGFDRIHIIDFDVGYGGQWSSLMQELASG 406
Query: 189 ---RQGCPPELLKITMVVGTTPS--KQKFEE--IENRLANFAETINLPFPF---NISFLT 238
R+ LK+T V PS +FE E L FA + +PF ++ L
Sbjct: 407 VGGRRRNRASSLKLT-VFAPPPSTVSDEFELRFTEENLKTFAGEVKIPFEIELLSVELLL 465
Query: 239 DIK----DFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEVESNDN 294
+ ++E E +AV PV+ L L L++++P ++V + + N
Sbjct: 466 NPAYWPLSLRSSEKEAIAVNLPVNSV----ASGYLPLILRFLKQLSPNIVVCSDRGCDRN 521
Query: 295 LQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGH 354
F + +L + +L + L+ N+ + + E + I ++ R
Sbjct: 522 DAPFPNAVIHSLQYHTSLLESLDANQNQ---DDSSIERFWVQPSIEKLLMKR--HRWIE- 575
Query: 355 MKIDGWRDLFNRFGLVEAELSSWSLFQAELIL-RSFACGSSCTIDRNGECLIIGWKGIPH 413
+ WR LF + G A LS + QAE +L R+ G +++ L++ W+
Sbjct: 576 -RSPPWRILFTQCGFSPASLSQMAEAQAECLLQRNPVRGFH--VEKRQSSLVMCWQRKEL 632
Query: 414 LSLSVWK 420
+++S WK
Sbjct: 633 VTVSAWK 639
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 132 (51.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 44/153 (28%), Positives = 70/153 (45%)
Query: 212 FEEIENRLANFAETINLPFPFNI--SFLTD----------IKDFETNEGEVVAVYSPVH- 258
+EE+ ++L NFA T N+ F I S +D I F NE VV + +H
Sbjct: 43 YEELGSKLVNFATTRNVAMEFRIISSSYSDGLSSLIEQLRIDPFVFNEALVVNCHMMLHY 102
Query: 259 LSHMIRKPNCLETFLTELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEV 318
+ I N FL ELR +NP ++ +I+ +S+ F R + +D E+
Sbjct: 103 IPDEILTSNLRSVFLKELRDLNPTIVTLIDEDSDFTSTNFISRLRSLYNYMWIPYDTAEM 162
Query: 319 CMNRCHANRMTFEEMYAGQHIRNIIASEGEERI 351
+ R R +E + + I N++A EG ER+
Sbjct: 163 FLTRGSEQRQWYEADISWK-IDNVVAKEGAERV 194
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 128 (50.1 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 88/390 (22%), Positives = 154/390 (39%)
Query: 57 AEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGRITSKG-LKS 115
A I + + A+ L V + + N ++LV + ALR R + K L S
Sbjct: 273 ATAIAEGKTEIATEILARVSQTPNLERNSEEKLVDFMVAALRSRIASPVTELYGKEHLIS 332
Query: 116 EEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKKIHIIDLATRT 175
+++ L P C+ K+ F + A + A N H+ID
Sbjct: 333 TQLLYELSP-------------CF-KLGF-EAANLAILDAADNNDGGMMIPHVIDFDIGE 377
Query: 176 GSHCPAIMQALATRQGCPPE-----LLKITMVVGTT-------PSKQKFEEIENRLANFA 223
G +++ L+TR+ + ++KIT V +++ + + + L+
Sbjct: 378 GGQYVNLLRTLSTRRNGKSQSQNSPVVKITAVANNVYGCLVDDGGEERLKAVGDLLSQLG 437
Query: 224 ETINLPFPFNI--SF-LTDI--KDFETNEGEVVAVYSPVHLSHMIRKPNCLET----FLT 274
+ + + FN+ S L D+ + + E +AV L + + C E L
Sbjct: 438 DRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKLYRVPDESVCTENPRDELLR 497
Query: 275 ELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMY 334
++ + P V+ ++E E N N F R + +GAL + +E + +++R EE
Sbjct: 498 RVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLESVESTVPSTNSDRAKVEEGI 557
Query: 335 AGQHIRNIIASEGEERIFGHMKIDG-WRDLFNRFGLVEAELSSWSLFQAELIL-RSFACG 392
G+ + N +A EG +RI ++ G WR R + EL S AE + R
Sbjct: 558 -GRKLVNAVACEGIDRI-ERCEVFGKWR---MRMSMAGFELMPLSEKIAESMKSRGNRVH 612
Query: 393 SSCTI--DRNGECLIIGWKGIPHLSLSVWK 420
T+ D G C GW G S W+
Sbjct: 613 PGFTVKEDNGGVCF--GWMGRALTVASAWR 640
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.139 0.422 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 424 424 0.00084 118 3 11 22 0.47 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 623 (66 KB)
Total size of DFA: 273 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 37.33u 0.20s 37.53t Elapsed: 00:00:02
Total cpu time: 37.33u 0.20s 37.53t Elapsed: 00:00:02
Start: Sat May 11 15:31:20 2013 End: Sat May 11 15:31:22 2013