Query 043031
Match_columns 424
No_of_seqs 150 out of 711
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 21:21:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043031.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043031hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 97.7 0.00033 1.1E-08 67.0 13.3 109 165-291 71-181 (261)
2 2aot_A HMT, histamine N-methyl 96.5 0.052 1.8E-06 51.7 14.8 113 163-287 51-170 (292)
3 3dtn_A Putative methyltransfer 96.4 0.019 6.6E-07 52.3 10.9 177 154-374 33-211 (234)
4 1vl5_A Unknown conserved prote 96.1 0.11 3.7E-06 48.1 14.5 109 155-287 28-138 (260)
5 3dh0_A SAM dependent methyltra 95.9 0.42 1.4E-05 42.6 17.1 114 154-288 27-142 (219)
6 3dlc_A Putative S-adenosyl-L-m 95.7 0.059 2E-06 47.9 10.0 112 153-288 33-147 (219)
7 3htx_A HEN1; HEN1, small RNA m 95.5 0.083 2.8E-06 58.5 12.0 126 155-294 712-840 (950)
8 2r3s_A Uncharacterized protein 95.5 0.44 1.5E-05 45.7 16.2 117 154-292 153-275 (335)
9 3ujc_A Phosphoethanolamine N-m 95.2 0.16 5.4E-06 46.7 11.6 123 143-287 34-157 (266)
10 3mgg_A Methyltransferase; NYSG 95.1 0.44 1.5E-05 44.3 14.6 104 163-288 36-141 (276)
11 3dp7_A SAM-dependent methyltra 95.0 0.54 1.8E-05 46.3 15.4 113 156-291 171-290 (363)
12 1xxl_A YCGJ protein; structura 94.9 1.2 4E-05 40.7 16.6 111 156-290 13-126 (239)
13 4a6d_A Hydroxyindole O-methylt 94.7 0.22 7.6E-06 49.1 11.7 160 153-374 168-331 (353)
14 3f4k_A Putative methyltransfer 94.7 1 3.5E-05 41.1 15.6 126 139-288 20-149 (257)
15 3bkx_A SAM-dependent methyltra 94.5 2 6.9E-05 39.6 17.3 123 154-296 33-167 (275)
16 3bus_A REBM, methyltransferase 94.3 2 6.7E-05 39.6 16.7 114 154-290 51-168 (273)
17 4fsd_A Arsenic methyltransfera 94.3 0.58 2E-05 46.5 13.8 113 164-292 83-207 (383)
18 1x19_A CRTF-related protein; m 93.9 1.1 3.9E-05 43.6 14.9 115 154-291 180-298 (359)
19 3vc1_A Geranyl diphosphate 2-C 93.8 1.8 6.2E-05 41.2 15.9 110 154-287 106-219 (312)
20 3h2b_A SAM-dependent methyltra 93.5 0.41 1.4E-05 42.2 10.0 98 165-288 42-140 (203)
21 1xtp_A LMAJ004091AAA; SGPP, st 93.2 0.19 6.6E-06 45.9 7.5 115 154-290 83-198 (254)
22 3jwh_A HEN1; methyltransferase 93.1 0.71 2.4E-05 41.3 11.0 113 156-290 21-142 (217)
23 3jwg_A HEN1, methyltransferase 93.0 0.55 1.9E-05 42.0 10.1 119 154-294 19-146 (219)
24 3sm3_A SAM-dependent methyltra 92.8 1.3 4.5E-05 39.5 12.4 106 165-291 31-144 (235)
25 2ip2_A Probable phenazine-spec 92.8 0.99 3.4E-05 43.4 12.3 114 154-290 158-274 (334)
26 3hnr_A Probable methyltransfer 92.8 0.54 1.9E-05 41.9 9.7 108 154-288 35-144 (220)
27 3mcz_A O-methyltransferase; ad 92.7 2 6.9E-05 41.5 14.3 115 155-290 169-289 (352)
28 1qzz_A RDMB, aclacinomycin-10- 92.4 2.4 8.3E-05 41.2 14.7 113 154-289 172-288 (374)
29 3l8d_A Methyltransferase; stru 91.9 2.6 8.9E-05 37.8 13.3 99 165-289 54-153 (242)
30 3p9c_A Caffeic acid O-methyltr 91.8 1.3 4.5E-05 43.6 11.9 108 154-290 190-300 (364)
31 3m70_A Tellurite resistance pr 91.7 2 6.8E-05 40.1 12.6 112 155-291 111-225 (286)
32 3gwz_A MMCR; methyltransferase 91.2 1.2 4.1E-05 43.8 10.9 116 154-292 192-311 (369)
33 3ccf_A Cyclopropane-fatty-acyl 91.0 1.9 6.6E-05 40.1 11.6 107 155-290 48-155 (279)
34 3kkz_A Uncharacterized protein 90.9 3.6 0.00012 37.8 13.4 126 138-287 19-148 (267)
35 2qe6_A Uncharacterized protein 90.7 9.3 0.00032 35.9 16.3 102 166-288 79-195 (274)
36 3reo_A (ISO)eugenol O-methyltr 90.6 3.7 0.00013 40.3 13.9 108 154-290 192-302 (368)
37 3g5l_A Putative S-adenosylmeth 90.6 3.1 0.00011 37.8 12.5 112 152-288 32-144 (253)
38 3e23_A Uncharacterized protein 90.4 1.9 6.3E-05 38.2 10.5 96 165-288 44-140 (211)
39 3hem_A Cyclopropane-fatty-acyl 90.4 3.9 0.00013 38.5 13.4 113 154-288 62-182 (302)
40 3ocj_A Putative exported prote 90.2 4.2 0.00014 38.5 13.4 106 164-288 118-226 (305)
41 1tw3_A COMT, carminomycin 4-O- 90.2 5.2 0.00018 38.6 14.4 114 154-290 173-290 (360)
42 3gu3_A Methyltransferase; alph 90.0 12 0.00041 34.8 16.7 103 163-287 21-124 (284)
43 3ofk_A Nodulation protein S; N 90.0 2.6 8.9E-05 37.3 11.2 111 156-289 43-154 (216)
44 2xvm_A Tellurite resistance pr 89.2 5.4 0.00019 34.3 12.4 108 155-287 23-134 (199)
45 3i53_A O-methyltransferase; CO 89.0 5.5 0.00019 38.1 13.4 111 156-289 161-275 (332)
46 3giw_A Protein of unknown func 88.7 0.79 2.7E-05 44.2 6.9 142 137-290 47-202 (277)
47 3bgv_A MRNA CAP guanine-N7 met 88.5 5.1 0.00017 37.9 12.7 110 164-288 34-154 (313)
48 1y8c_A S-adenosylmethionine-de 88.5 2.9 9.8E-05 37.4 10.4 104 164-289 37-142 (246)
49 3dli_A Methyltransferase; PSI- 88.3 0.97 3.3E-05 41.1 7.1 93 165-288 42-139 (240)
50 1nkv_A Hypothetical protein YJ 88.1 4.1 0.00014 37.0 11.3 110 154-287 26-138 (256)
51 2fk8_A Methoxy mycolic acid sy 87.7 19 0.00063 33.9 17.5 110 154-287 80-192 (318)
52 2o57_A Putative sarcosine dime 87.5 5.4 0.00018 37.2 12.0 116 154-292 68-191 (297)
53 4e2x_A TCAB9; kijanose, tetron 87.3 0.54 1.8E-05 46.9 5.0 110 155-289 98-208 (416)
54 2yqz_A Hypothetical protein TT 86.9 9.6 0.00033 34.4 13.0 102 163-288 38-140 (263)
55 1kpg_A CFA synthase;, cyclopro 86.8 7 0.00024 36.2 12.3 112 154-287 54-166 (287)
56 3g5t_A Trans-aconitate 3-methy 86.7 5.4 0.00019 37.4 11.6 106 163-287 35-147 (299)
57 4dcm_A Ribosomal RNA large sub 86.4 5.4 0.00018 39.6 11.8 123 152-290 210-335 (375)
58 1ve3_A Hypothetical protein PH 86.3 11 0.00036 33.3 12.7 100 165-288 39-141 (227)
59 1wzn_A SAM-dependent methyltra 86.1 6.7 0.00023 35.4 11.5 112 156-290 33-146 (252)
60 3p9n_A Possible methyltransfer 86.0 6 0.00021 34.3 10.7 106 165-294 45-158 (189)
61 2vdw_A Vaccinia virus capping 85.1 10 0.00034 36.3 12.7 106 165-287 49-167 (302)
62 2p7i_A Hypothetical protein; p 84.6 4.2 0.00015 36.2 9.2 95 166-288 44-140 (250)
63 3ou2_A SAM-dependent methyltra 84.4 5.3 0.00018 35.0 9.6 109 153-288 34-145 (218)
64 3lst_A CALO1 methyltransferase 84.2 3.9 0.00013 39.6 9.4 110 154-289 174-287 (348)
65 1dus_A MJ0882; hypothetical pr 84.1 12 0.00042 31.6 11.7 114 154-292 42-160 (194)
66 2p35_A Trans-aconitate 2-methy 83.5 6.1 0.00021 35.7 9.9 108 155-289 24-132 (259)
67 3hm2_A Precorrin-6Y C5,15-meth 83.2 12 0.00041 31.5 11.2 108 155-288 16-126 (178)
68 3g2m_A PCZA361.24; SAM-depende 83.1 2.5 8.6E-05 39.8 7.3 116 154-289 73-190 (299)
69 3bkw_A MLL3908 protein, S-aden 83.1 8 0.00027 34.5 10.4 110 154-288 33-143 (243)
70 3cgg_A SAM-dependent methyltra 82.8 8.8 0.0003 32.6 10.2 107 155-289 38-147 (195)
71 3e8s_A Putative SAM dependent 82.6 7.2 0.00025 34.2 9.8 109 152-289 40-152 (227)
72 3d2l_A SAM-dependent methyltra 82.5 18 0.00063 32.0 12.6 109 156-289 27-137 (243)
73 4htf_A S-adenosylmethionine-de 82.1 13 0.00045 34.3 11.9 108 156-288 61-172 (285)
74 3thr_A Glycine N-methyltransfe 81.5 4.4 0.00015 37.7 8.3 118 155-288 48-174 (293)
75 1vlm_A SAM-dependent methyltra 81.4 19 0.00067 31.7 12.3 90 165-288 48-138 (219)
76 2yxd_A Probable cobalt-precorr 80.2 8.5 0.00029 32.4 9.1 103 156-289 27-131 (183)
77 3pfg_A N-methyltransferase; N, 79.9 5.8 0.0002 36.3 8.4 98 165-288 51-150 (263)
78 1ri5_A MRNA capping enzyme; me 79.6 20 0.00068 32.9 12.1 108 165-289 65-174 (298)
79 3mq2_A 16S rRNA methyltransfer 79.6 4.6 0.00016 35.8 7.4 113 160-290 23-141 (218)
80 1fp1_D Isoliquiritigenin 2'-O- 79.3 14 0.00047 36.0 11.4 108 154-290 198-308 (372)
81 2p8j_A S-adenosylmethionine-de 79.1 18 0.00061 31.4 11.1 104 165-289 24-128 (209)
82 1zg3_A Isoflavanone 4'-O-methy 79.0 12 0.00041 36.2 10.8 108 155-291 182-296 (358)
83 3ege_A Putative methyltransfer 78.6 5.7 0.0002 36.5 8.0 115 154-298 24-140 (261)
84 1fp2_A Isoflavone O-methyltran 78.4 16 0.00055 35.2 11.5 99 164-291 188-291 (352)
85 3eey_A Putative rRNA methylase 77.1 16 0.00056 31.5 10.1 108 166-288 24-138 (197)
86 3lcv_B Sisomicin-gentamicin re 77.1 21 0.00072 34.2 11.4 135 154-318 124-260 (281)
87 2pjd_A Ribosomal RNA small sub 76.9 4.3 0.00015 39.4 6.8 119 152-290 184-304 (343)
88 2ex4_A Adrenal gland protein A 76.6 11 0.00037 33.9 9.1 107 164-290 79-187 (241)
89 1yzh_A TRNA (guanine-N(7)-)-me 76.0 33 0.0011 30.1 12.1 106 165-290 42-157 (214)
90 3uwp_A Histone-lysine N-methyl 75.4 25 0.00085 35.9 12.0 119 151-287 160-286 (438)
91 3cc8_A Putative methyltransfer 75.1 15 0.00051 32.1 9.4 104 154-288 23-129 (230)
92 3lcc_A Putative methyl chlorid 74.6 22 0.00076 31.6 10.6 99 166-287 68-169 (235)
93 4hg2_A Methyltransferase type 74.3 18 0.00063 33.6 10.3 91 167-287 42-133 (257)
94 3fzg_A 16S rRNA methylase; met 74.2 7 0.00024 35.8 6.9 100 166-289 51-152 (200)
95 2avn_A Ubiquinone/menaquinone 74.0 39 0.0013 30.6 12.4 98 164-289 54-152 (260)
96 2a14_A Indolethylamine N-methy 73.8 7.4 0.00025 36.0 7.3 113 162-288 53-196 (263)
97 2gs9_A Hypothetical protein TT 73.0 19 0.00063 31.4 9.5 102 156-288 29-131 (211)
98 3e05_A Precorrin-6Y C5,15-meth 72.6 34 0.0012 29.6 11.1 107 155-288 31-141 (204)
99 3frh_A 16S rRNA methylase; met 71.0 16 0.00054 34.6 8.8 121 165-316 106-228 (253)
100 2ift_A Putative methylase HI07 70.4 28 0.00094 30.6 10.0 102 166-293 55-167 (201)
101 3ggd_A SAM-dependent methyltra 70.3 5.9 0.0002 35.7 5.6 100 165-290 57-165 (245)
102 3i9f_A Putative type 11 methyl 70.2 43 0.0015 27.8 10.9 102 156-288 9-111 (170)
103 3r0q_C Probable protein argini 70.0 38 0.0013 33.2 11.9 115 154-289 53-169 (376)
104 1pjz_A Thiopurine S-methyltran 68.6 26 0.00089 30.8 9.5 103 164-284 22-135 (203)
105 2zfu_A Nucleomethylin, cerebra 67.3 15 0.0005 32.3 7.5 18 356-373 158-175 (215)
106 3g07_A 7SK snRNA methylphospha 67.0 4.8 0.00016 38.0 4.4 57 155-222 35-93 (292)
107 2esr_A Methyltransferase; stru 65.8 35 0.0012 28.7 9.5 108 165-296 32-145 (177)
108 3m33_A Uncharacterized protein 65.6 18 0.00063 32.2 7.9 41 165-218 49-89 (226)
109 3bxo_A N,N-dimethyltransferase 63.6 72 0.0025 27.9 11.5 100 163-288 39-140 (239)
110 2gb4_A Thiopurine S-methyltran 63.5 61 0.0021 29.8 11.3 105 164-286 68-188 (252)
111 2kw5_A SLR1183 protein; struct 62.5 73 0.0025 27.2 12.2 98 167-290 32-132 (202)
112 4azs_A Methyltransferase WBDD; 62.2 9.5 0.00033 39.9 5.9 105 164-287 66-173 (569)
113 3mti_A RRNA methylase; SAM-dep 61.9 44 0.0015 28.3 9.4 102 166-288 24-134 (185)
114 2g72_A Phenylethanolamine N-me 61.9 16 0.00055 33.9 7.0 45 164-220 71-115 (289)
115 3dmg_A Probable ribosomal RNA 60.8 79 0.0027 31.1 12.2 105 164-290 233-341 (381)
116 2fpo_A Methylase YHHF; structu 60.4 18 0.00063 31.8 6.8 102 166-293 56-164 (202)
117 3u81_A Catechol O-methyltransf 60.4 20 0.0007 31.8 7.1 110 165-294 59-175 (221)
118 1g6q_1 HnRNP arginine N-methyl 58.3 81 0.0028 30.0 11.5 103 165-288 39-144 (328)
119 2pxx_A Uncharacterized protein 58.3 30 0.001 29.8 7.8 104 164-287 42-157 (215)
120 3q7e_A Protein arginine N-meth 58.0 48 0.0016 32.0 9.9 114 154-290 56-174 (349)
121 2i62_A Nicotinamide N-methyltr 57.4 28 0.00097 31.2 7.7 46 162-219 54-99 (265)
122 1nv8_A HEMK protein; class I a 56.1 77 0.0026 29.6 10.7 106 166-291 125-251 (284)
123 2fca_A TRNA (guanine-N(7)-)-me 54.9 1.1E+02 0.0038 26.8 11.5 108 164-289 38-153 (213)
124 2y1w_A Histone-arginine methyl 54.7 61 0.0021 31.2 10.0 115 153-288 39-154 (348)
125 3njr_A Precorrin-6Y methylase; 53.3 1.1E+02 0.0039 26.6 13.1 103 155-288 46-153 (204)
126 1dl5_A Protein-L-isoaspartate 52.8 1E+02 0.0035 29.0 11.1 107 154-288 65-174 (317)
127 1zx0_A Guanidinoacetate N-meth 52.0 54 0.0018 29.2 8.6 103 164-287 60-168 (236)
128 3iv6_A Putative Zn-dependent a 49.5 24 0.00083 33.2 5.9 112 154-288 35-147 (261)
129 3lbf_A Protein-L-isoaspartate 48.7 1.3E+02 0.0044 25.8 10.5 104 156-290 69-175 (210)
130 1xj5_A Spermidine synthase 1; 48.3 63 0.0022 31.2 8.9 114 165-294 121-240 (334)
131 3ckk_A TRNA (guanine-N(7)-)-me 47.9 1.1E+02 0.0037 27.7 10.0 114 162-290 44-169 (235)
132 1ws6_A Methyltransferase; stru 47.7 77 0.0026 25.9 8.4 101 166-294 43-152 (171)
133 1u2z_A Histone-lysine N-methyl 46.3 1.7E+02 0.0059 29.4 12.0 118 154-288 232-358 (433)
134 3b3j_A Histone-arginine methyl 45.5 52 0.0018 33.6 8.1 113 154-289 148-263 (480)
135 3q87_B N6 adenine specific DNA 45.3 1.2E+02 0.0041 25.5 9.4 34 167-214 26-59 (170)
136 3evz_A Methyltransferase; NYSG 45.2 97 0.0033 27.0 9.1 106 165-288 56-178 (230)
137 1in0_A YAJQ protein, HI1034; a 45.2 20 0.00069 31.6 4.2 33 196-235 129-161 (163)
138 2qn6_B Translation initiation 45.0 19 0.00065 28.7 3.7 40 192-233 50-91 (93)
139 2fyt_A Protein arginine N-meth 44.9 2.1E+02 0.0072 27.2 12.1 111 154-286 54-168 (340)
140 3dxy_A TRNA (guanine-N(7)-)-me 44.7 1E+02 0.0035 27.5 9.2 109 164-290 34-151 (218)
141 2pt6_A Spermidine synthase; tr 44.5 37 0.0013 32.6 6.5 108 166-291 118-232 (321)
142 1uwv_A 23S rRNA (uracil-5-)-me 44.2 2E+02 0.007 28.4 12.2 108 156-289 278-389 (433)
143 1af7_A Chemotaxis receptor met 42.5 49 0.0017 31.2 6.9 117 164-288 105-251 (274)
144 3adn_A Spermidine synthase; am 42.3 1.4E+02 0.0049 28.0 10.2 132 165-317 84-223 (294)
145 2o07_A Spermidine synthase; st 41.9 90 0.0031 29.6 8.8 131 166-315 97-232 (304)
146 1iy9_A Spermidine synthase; ro 41.4 1.8E+02 0.0061 26.9 10.6 132 165-315 76-212 (275)
147 3fut_A Dimethyladenosine trans 41.2 1.4E+02 0.0048 27.9 9.9 83 154-259 37-122 (271)
148 1o9g_A RRNA methyltransferase; 41.0 46 0.0016 30.0 6.3 56 156-220 43-98 (250)
149 3grz_A L11 mtase, ribosomal pr 40.8 60 0.0021 28.0 6.8 65 153-233 47-114 (205)
150 3p2e_A 16S rRNA methylase; met 38.4 1.1E+02 0.0039 27.3 8.5 106 164-287 24-137 (225)
151 4hc4_A Protein arginine N-meth 38.3 1.2E+02 0.0039 30.1 9.1 99 167-286 86-186 (376)
152 1inl_A Spermidine synthase; be 38.1 1.3E+02 0.0045 28.2 9.2 130 166-316 92-229 (296)
153 2yxe_A Protein-L-isoaspartate 38.1 1.9E+02 0.0065 24.7 10.5 106 155-288 68-176 (215)
154 2b3t_A Protein methyltransfera 37.2 2.2E+02 0.0074 25.9 10.4 108 164-288 109-237 (276)
155 1zq9_A Probable dimethyladenos 37.1 2.3E+02 0.0077 26.3 10.7 87 154-258 18-104 (285)
156 1wy7_A Hypothetical protein PH 36.5 2E+02 0.0068 24.5 11.5 92 165-280 50-141 (207)
157 2qm3_A Predicted methyltransfe 36.2 3E+02 0.01 26.4 13.6 94 165-283 173-271 (373)
158 2i7c_A Spermidine synthase; tr 36.1 62 0.0021 30.2 6.5 107 166-290 80-193 (283)
159 3lpm_A Putative methyltransfer 35.8 2.4E+02 0.0083 25.2 11.5 108 164-288 49-175 (259)
160 1uir_A Polyamine aminopropyltr 35.7 1E+02 0.0036 29.1 8.1 108 166-289 79-195 (314)
161 2jjq_A Uncharacterized RNA met 35.4 2.8E+02 0.0095 27.6 11.6 96 166-289 292-387 (425)
162 2fhp_A Methylase, putative; al 34.8 1.9E+02 0.0066 23.8 9.2 104 165-294 45-159 (187)
163 3tm4_A TRNA (guanine N2-)-meth 34.6 3.1E+02 0.011 26.4 11.6 106 163-287 216-329 (373)
164 3mb5_A SAM-dependent methyltra 34.3 1.4E+02 0.0049 26.4 8.5 57 155-221 84-140 (255)
165 3g89_A Ribosomal RNA small sub 34.1 79 0.0027 28.8 6.8 98 163-288 79-183 (249)
166 2ipx_A RRNA 2'-O-methyltransfe 33.9 2.2E+02 0.0077 24.8 9.7 99 165-289 78-182 (233)
167 3tfw_A Putative O-methyltransf 33.6 1.2E+02 0.004 27.4 7.8 101 166-289 65-170 (248)
168 1l3i_A Precorrin-6Y methyltran 33.0 1.1E+02 0.0038 25.3 7.1 52 156-220 25-76 (192)
169 3orh_A Guanidinoacetate N-meth 31.8 1.1E+02 0.0036 27.5 7.1 101 165-286 61-167 (236)
170 2b2c_A Spermidine synthase; be 31.5 52 0.0018 31.5 5.2 129 166-315 110-245 (314)
171 3bwc_A Spermidine synthase; SA 29.9 1.6E+02 0.0056 27.5 8.4 108 165-290 96-211 (304)
172 2frn_A Hypothetical protein PH 29.7 3.3E+02 0.011 24.9 11.1 96 167-289 128-225 (278)
173 3tma_A Methyltransferase; thum 29.4 2.1E+02 0.0072 27.2 9.2 110 156-283 195-311 (354)
174 1jsx_A Glucose-inhibited divis 29.2 76 0.0026 27.2 5.5 95 166-289 67-165 (207)
175 4dzr_A Protein-(glutamine-N5) 29.2 38 0.0013 29.0 3.4 53 156-219 21-74 (215)
176 1mjf_A Spermidine synthase; sp 29.2 1.1E+02 0.0038 28.4 6.9 106 166-291 77-195 (281)
177 2kl8_A OR15; structural genomi 28.0 73 0.0025 23.8 4.2 34 196-234 43-76 (85)
178 5nul_A Flavodoxin; electron tr 27.3 2.4E+02 0.0081 22.5 9.5 73 211-287 11-85 (138)
179 2ksn_A Ubiquitin domain-contai 27.2 54 0.0019 28.0 3.8 39 46-85 55-93 (137)
180 2pbf_A Protein-L-isoaspartate 26.4 1.7E+02 0.0057 25.4 7.4 50 164-221 80-131 (227)
181 3ghf_A Septum site-determining 26.3 73 0.0025 26.3 4.5 50 166-230 49-99 (120)
182 4a69_A Histone deacetylase 3,; 26.2 36 0.0012 34.0 3.0 24 156-179 154-179 (376)
183 1vbf_A 231AA long hypothetical 26.1 1.9E+02 0.0066 25.0 7.7 103 155-289 61-165 (231)
184 3kcq_A Phosphoribosylglycinami 26.1 1.8E+02 0.0062 26.4 7.6 46 270-315 72-131 (215)
185 1qam_A ERMC' methyltransferase 25.2 87 0.003 28.4 5.3 53 154-219 20-72 (244)
186 3max_A HD2, histone deacetylas 25.1 39 0.0013 33.6 3.0 24 156-179 154-179 (367)
187 3gru_A Dimethyladenosine trans 24.8 2.1E+02 0.0073 27.0 8.2 85 154-259 40-126 (295)
188 1o54_A SAM-dependent O-methylt 24.7 2E+02 0.0069 26.0 7.8 109 155-289 103-213 (277)
189 3duw_A OMT, O-methyltransferas 23.7 3.5E+02 0.012 23.2 10.0 102 166-290 60-168 (223)
190 2ozv_A Hypothetical protein AT 23.5 3.2E+02 0.011 24.7 8.9 113 163-290 35-171 (260)
191 3ew8_A HD8, histone deacetylas 23.2 44 0.0015 33.5 3.0 24 156-179 162-187 (388)
192 2b25_A Hypothetical protein; s 22.7 1.3E+02 0.0045 28.3 6.2 69 145-223 86-154 (336)
193 3tqs_A Ribosomal RNA small sub 22.6 1.3E+02 0.0044 27.8 6.0 54 154-220 19-72 (255)
194 2h00_A Methyltransferase 10 do 22.1 1.2E+02 0.0042 27.0 5.7 57 164-235 65-123 (254)
195 1ne2_A Hypothetical protein TA 22.1 2.9E+02 0.0098 23.4 7.9 87 165-279 52-138 (200)
196 1r18_A Protein-L-isoaspartate( 21.8 2.2E+02 0.0074 24.8 7.2 53 165-222 85-137 (227)
197 2f8l_A Hypothetical protein LM 21.6 5.1E+02 0.017 24.3 12.6 84 162-257 128-211 (344)
198 2pwy_A TRNA (adenine-N(1)-)-me 21.3 1.9E+02 0.0065 25.5 6.8 57 155-221 87-143 (258)
199 1i9g_A Hypothetical protein RV 20.6 2E+02 0.0069 25.8 6.9 59 154-222 89-147 (280)
200 1i1n_A Protein-L-isoaspartate 20.3 1.9E+02 0.0065 25.0 6.4 48 164-221 77-124 (226)
201 3b5i_A S-adenosyl-L-methionine 20.3 5.7E+02 0.02 25.0 10.5 97 164-266 52-167 (374)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.73 E-value=0.00033 Score=66.99 Aligned_cols=109 Identities=17% Similarity=0.234 Sum_probs=68.2
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcccc
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFE 244 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~ 244 (424)
.-+|+|+|.|.|. +...|+.+- ++|. .+||| |+. +...++.+.+++.++- .+.+.+|.. .++.++.
T Consensus 71 ~~~vLDlGcGtG~----~~~~la~~~-~~~~-~~v~g-vD~--s~~ml~~A~~~~~~~~--~~~~v~~~~---~D~~~~~ 136 (261)
T 4gek_A 71 GTQVYDLGCSLGA----ATLSVRRNI-HHDN-CKIIA-IDN--SPAMIERCRRHIDAYK--APTPVDVIE---GDIRDIA 136 (261)
T ss_dssp TCEEEEETCTTTH----HHHHHHHTC-CSSS-CEEEE-EES--CHHHHHHHHHHHHTSC--CSSCEEEEE---SCTTTCC
T ss_pred CCEEEEEeCCCCH----HHHHHHHhc-CCCC-CEEEE-EEC--CHHHHHHHHHHHHhhc--cCceEEEee---ccccccc
Confidence 3479999999884 556677664 3453 89999 985 7888888877765332 223344432 3555555
Q ss_pred cCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEE-EEeeeC
Q 043031 245 TNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMV-VIEVES 291 (424)
Q Consensus 245 ~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvv-l~E~ea 291 (424)
..+-.+++.| +.|||+.. ..+..+|+.| |.|+|.-.. +.|.-.
T Consensus 137 ~~~~d~v~~~--~~l~~~~~--~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 137 IENASMVVLN--FTLQFLEP--SERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp CCSEEEEEEE--SCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred ccccccceee--eeeeecCc--hhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 4444455545 45788753 3456788776 678997654 445543
No 2
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=96.51 E-value=0.052 Score=51.70 Aligned_cols=113 Identities=12% Similarity=0.155 Sum_probs=65.5
Q ss_pred CCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcc
Q 043031 163 AKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKD 242 (424)
Q Consensus 163 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~ 242 (424)
.+..+|+|+|.|.|.--..++..++.+. |...+.+|| |++ +...++.+.+++.+...--++.|+|... +.++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~--~~~~v~~~~-vD~--S~~ml~~a~~~~~~~~~~~~v~~~~~~~---~~~~ 122 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQY--PGVCINNEV-VEP--SAEQIAKYKELVAKTSNLENVKFAWHKE---TSSE 122 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHS--TTCEEEEEE-ECS--CHHHHHHHHHHHHTCSSCTTEEEEEECS---CHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhC--CCceeeEEE-EeC--CHHHHHHHHHHHHhccCCCcceEEEEec---chhh
Confidence 4567999999999954445777777652 211124499 885 7777877766643211111345554433 2222
Q ss_pred cc------cCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEE
Q 043031 243 FE------TNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVI 287 (424)
Q Consensus 243 l~------~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~ 287 (424)
+. ..++..=+|-|...|||+.+ .+.+|+.+ |-|+|.-.+++
T Consensus 123 ~~~~~~~~~~~~~fD~V~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~i 170 (292)
T 2aot_A 123 YQSRMLEKKELQKWDFIHMIQMLYYVKD----IPATLKFFHSLLGTNAKMLI 170 (292)
T ss_dssp HHHHHHTTTCCCCEEEEEEESCGGGCSC----HHHHHHHHHHTEEEEEEEEE
T ss_pred hhhhhccccCCCceeEEEEeeeeeecCC----HHHHHHHHHHHcCCCcEEEE
Confidence 21 22343445556677899864 45667666 55699755554
No 3
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=96.44 E-value=0.019 Score=52.32 Aligned_cols=177 Identities=12% Similarity=0.138 Sum_probs=92.7
Q ss_pred HHHHhhhc-CCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEE
Q 043031 154 QAVIENVS-SAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPF 232 (424)
Q Consensus 154 qaIleA~~-g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF 232 (424)
+.+++.+. ..+.-.|+|+|.|.|. +...|+.+. |. .++|| |+. +...++.+.+++ +..+ ..+|
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~---~~-~~v~~-vD~--s~~~~~~a~~~~----~~~~-~~~~ 96 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGL----LSAFLMEKY---PE-ATFTL-VDM--SEKMLEIAKNRF----RGNL-KVKY 96 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSH----HHHHHHHHC---TT-CEEEE-EES--CHHHHHHHHHHT----CSCT-TEEE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCH----HHHHHHHhC---CC-CeEEE-EEC--CHHHHHHHHHhh----ccCC-CEEE
Confidence 55666664 4556899999999884 455566552 32 68999 885 666666665553 2223 3344
Q ss_pred EEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEeeeCCCCCCchHHHHHHHHHHHHH
Q 043031 233 NISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGA 311 (424)
Q Consensus 233 ~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~ea~~ns~~F~~RF~eaL~~Ysa 311 (424)
..- +..++... +..=+|-|...|||+.+ .....+|+.+ +.|+|.-.+++-.....+.+.+.......+..
T Consensus 97 ~~~---d~~~~~~~-~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~--- 167 (234)
T 3dtn_A 97 IEA---DYSKYDFE-EKYDMVVSALSIHHLED--EDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQ--- 167 (234)
T ss_dssp EES---CTTTCCCC-SCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHH---
T ss_pred EeC---chhccCCC-CCceEEEEeCccccCCH--HHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHH---
Confidence 332 34333222 33333444466888842 2334566655 66899766665433333333333222221111
Q ss_pred HHHhhhhhcCCCchhHHHHHHHHHhHhHHHHHhhcccccccCCCChhhHHHHHhcCCCccccC
Q 043031 312 LFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAEL 374 (424)
Q Consensus 312 lFDsLda~~~~~s~~R~~iE~~~lg~eI~niVaceG~~R~ER~e~~~~W~~r~~~aGF~~~~l 374 (424)
.+.. ..+ +. . ++.+..... ...+.-+.+.|...|++|||+.+..
T Consensus 168 ~~~~--~~~---~~--~---------~~~~~~~~~---~~~~~~~~~~~~~ll~~aGF~~v~~ 211 (234)
T 3dtn_A 168 YVEN--SGL---TE--E---------EIAAGYERS---KLDKDIEMNQQLNWLKEAGFRDVSC 211 (234)
T ss_dssp HHHT--SSC---CH--H---------HHHTTC-------CCCCCBHHHHHHHHHHTTCEEEEE
T ss_pred HHHh--cCC---CH--H---------HHHHHHHhc---ccccccCHHHHHHHHHHcCCCceee
Confidence 1110 111 11 1 111111111 2345667889999999999987655
No 4
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=96.13 E-value=0.11 Score=48.14 Aligned_cols=109 Identities=13% Similarity=0.190 Sum_probs=64.7
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc-eEEE
Q 043031 155 AVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP-FPFN 233 (424)
Q Consensus 155 aIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp-FeF~ 233 (424)
.|++.+...+.-+|+|+|.|.|. +...|+.+. + ++|| |+. +...++.+.+++ +..|++ .+|.
T Consensus 28 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~---~v~g-vD~--s~~~l~~a~~~~----~~~~~~~v~~~ 90 (260)
T 1vl5_A 28 KLMQIAALKGNEEVLDVATGGGH----VANAFAPFV---K---KVVA-FDL--TEDILKVARAFI----EGNGHQQVEYV 90 (260)
T ss_dssp HHHHHHTCCSCCEEEEETCTTCH----HHHHHGGGS---S---EEEE-EES--CHHHHHHHHHHH----HHTTCCSEEEE
T ss_pred HHHHHhCCCCCCEEEEEeCCCCH----HHHHHHHhC---C---EEEE-EeC--CHHHHHHHHHHH----HhcCCCceEEE
Confidence 34444444455689999999885 556677662 2 7999 874 666676665554 344554 4443
Q ss_pred EEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHH-HHhcCCCeEEEE
Q 043031 234 ISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTE-LRKINPCVMVVI 287 (424)
Q Consensus 234 ~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvl~ 287 (424)
.- ++.++...++..=+|-|...|||+.+ ...+|+. .+.|+|.-.+++
T Consensus 91 ~~---d~~~l~~~~~~fD~V~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 91 QG---DAEQMPFTDERFHIVTCRIAAHHFPN----PASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp EC---CC-CCCSCTTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEE
T ss_pred Ee---cHHhCCCCCCCEEEEEEhhhhHhcCC----HHHHHHHHHHHcCCCCEEEE
Confidence 32 44444444443334445566889854 3355554 477899766555
No 5
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=95.94 E-value=0.42 Score=42.63 Aligned_cols=114 Identities=14% Similarity=0.218 Sum_probs=66.2
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc-eEE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP-FPF 232 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp-FeF 232 (424)
+.+++.+.-.+.-.|+|+|.|.|.- ...|+.+ ++|. .++|| |+. +...++.+.+++.+ .|++ ++|
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~----~~~l~~~--~~~~-~~v~~-vD~--s~~~~~~a~~~~~~----~~~~~~~~ 92 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFY----LPYLSKM--VGEK-GKVYA-IDV--QEEMVNYAWEKVNK----LGLKNVEV 92 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTT----HHHHHHH--HTTT-CEEEE-EES--CHHHHHHHHHHHHH----HTCTTEEE
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHH----HHHHHHH--hCCC-cEEEE-EEC--CHHHHHHHHHHHHH----cCCCcEEE
Confidence 4556666545556899999999863 3334443 2232 68999 874 67777766666543 3544 444
Q ss_pred EEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 233 NISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 233 ~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
... +..++...++..=+|-+...+||+.+ ...+|+.+ +.|+|.-.+++.
T Consensus 93 ~~~---d~~~~~~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~i~ 142 (219)
T 3dh0_A 93 LKS---EENKIPLPDNTVDFIFMAFTFHELSE----PLKFLEELKRVAKPFAYLAII 142 (219)
T ss_dssp EEC---BTTBCSSCSSCEEEEEEESCGGGCSS----HHHHHHHHHHHEEEEEEEEEE
T ss_pred Eec---ccccCCCCCCCeeEEEeehhhhhcCC----HHHHHHHHHHHhCCCeEEEEE
Confidence 333 33333343443333444456788743 34566554 678997655553
No 6
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=95.66 E-value=0.059 Score=47.92 Aligned_cols=112 Identities=18% Similarity=0.185 Sum_probs=68.0
Q ss_pred HHHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--e
Q 043031 153 IQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--F 230 (424)
Q Consensus 153 NqaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--F 230 (424)
.+.+++.+..... +|+|+|.|.|. +...|+.+ | ..++|| |+. +...++.+.+++. ..|+. .
T Consensus 33 ~~~~~~~~~~~~~-~vLdiG~G~G~----~~~~l~~~----~-~~~v~~-~D~--s~~~~~~a~~~~~----~~~~~~~~ 95 (219)
T 3dlc_A 33 AENIINRFGITAG-TCIDIGSGPGA----LSIALAKQ----S-DFSIRA-LDF--SKHMNEIALKNIA----DANLNDRI 95 (219)
T ss_dssp HHHHHHHHCCCEE-EEEEETCTTSH----HHHHHHHH----S-EEEEEE-EES--CHHHHHHHHHHHH----HTTCTTTE
T ss_pred HHHHHHhcCCCCC-EEEEECCCCCH----HHHHHHHc----C-CCeEEE-EEC--CHHHHHHHHHHHH----hccccCce
Confidence 3556666665555 99999999985 55566665 2 268999 874 6666766665543 44553 4
Q ss_pred EEEEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 231 PFNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 231 eF~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
+|... +..++...++..=+|-|...|||+.+ ...+|+.+ +.|+|.-.+++.
T Consensus 96 ~~~~~---d~~~~~~~~~~~D~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 96 QIVQG---DVHNIPIEDNYADLIVSRGSVFFWED----VATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp EEEEC---BTTBCSSCTTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEc---CHHHCCCCcccccEEEECchHhhccC----HHHHHHHHHHhCCCCCEEEEE
Confidence 44433 33334444443333444456788732 44566554 678998766664
No 7
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=95.47 E-value=0.083 Score=58.51 Aligned_cols=126 Identities=16% Similarity=0.182 Sum_probs=76.7
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHH--HHhCCCceEE
Q 043031 155 AVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANF--AETINLPFPF 232 (424)
Q Consensus 155 aIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~f--A~~lgvpFeF 232 (424)
.|++.+...+.-.|+|+|.|.| .+...|+.+ ++| .-+||| |+. +...++.+.++|... ++..|++ ..
T Consensus 712 ~LLelL~~~~g~rVLDVGCGTG----~lai~LAr~--g~p-~a~VtG-VDI--S~emLe~AReRLa~~lnAkr~gl~-nV 780 (950)
T 3htx_A 712 YALKHIRESSASTLVDFGCGSG----SLLDSLLDY--PTS-LQTIIG-VDI--SPKGLARAAKMLHVKLNKEACNVK-SA 780 (950)
T ss_dssp HHHHHHHHSCCSEEEEETCSSS----HHHHHHTSS--CCC-CCEEEE-EES--CHHHHHHHHHHHHHHTTTTCSSCS-EE
T ss_pred HHHHHhcccCCCEEEEECCCCC----HHHHHHHHh--CCC-CCeEEE-EEC--CHHHHHHHHHHhhhccchhhcCCC-ce
Confidence 3445554445567999999999 456667765 444 259999 985 788888888888765 2234554 22
Q ss_pred EEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHH-HHhcCCCeEEEEeeeCCCC
Q 043031 233 NISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTE-LRKINPCVMVVIEVESNDN 294 (424)
Q Consensus 233 ~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvl~E~ea~~n 294 (424)
+.+. .++.++....+..=+|-|...+||+.+ .....+++. .+.|+|.++++...+.++|
T Consensus 781 efiq-GDa~dLp~~d~sFDlVV~~eVLeHL~d--p~l~~~L~eI~RvLKPG~LIISTPN~eyN 840 (950)
T 3htx_A 781 TLYD-GSILEFDSRLHDVDIGTCLEVIEHMEE--DQACEFGEKVLSLFHPKLLIVSTPNYEFN 840 (950)
T ss_dssp EEEE-SCTTSCCTTSCSCCEEEEESCGGGSCH--HHHHHHHHHHHHTTCCSEEEEEECBGGGH
T ss_pred EEEE-CchHhCCcccCCeeEEEEeCchhhCCh--HHHHHHHHHHHHHcCCCEEEEEecCchhh
Confidence 2222 345444333332223333455789864 234456655 5888999777777765443
No 8
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=95.45 E-value=0.44 Score=45.69 Aligned_cols=117 Identities=15% Similarity=0.189 Sum_probs=69.3
Q ss_pred HHHHhhhcC--CCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--
Q 043031 154 QAVIENVSS--AKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP-- 229 (424)
Q Consensus 154 qaIleA~~g--~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp-- 229 (424)
..|++.+.. .+..+|+|+|.|.|. +...|+.+. |. .++|+ ++. + ..++.+.+++.+ .|++
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~-~~~~~-~D~--~-~~~~~a~~~~~~----~~~~~~ 216 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGL----FGIAVAQHN---PN-AEIFG-VDW--A-SVLEVAKENARI----QGVASR 216 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCH----HHHHHHHHC---TT-CEEEE-EEC--H-HHHHHHHHHHHH----HTCGGG
T ss_pred HHHHHhcccccCCCCEEEEECCCcCH----HHHHHHHHC---CC-CeEEE-Eec--H-HHHHHHHHHHHh----cCCCcc
Confidence 466776654 667899999999994 555666653 43 69999 875 5 667776666543 3443
Q ss_pred eEEEEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCe-EEEEeeeCC
Q 043031 230 FPFNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCV-MVVIEVESN 292 (424)
Q Consensus 230 FeF~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~v-vvl~E~ea~ 292 (424)
.+|... ++.+..+..+ .=+|-+...||++.+ .....+|+.+ +.|+|.- ++++|...+
T Consensus 217 v~~~~~---d~~~~~~~~~-~D~v~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 217 YHTIAG---SAFEVDYGND-YDLVLLPNFLHHFDV--ATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp EEEEES---CTTTSCCCSC-EEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred eEEEec---ccccCCCCCC-CcEEEEcchhccCCH--HHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 555443 3322222222 333334445788742 2244666665 6689976 555665443
No 9
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=95.20 E-value=0.16 Score=46.71 Aligned_cols=123 Identities=11% Similarity=0.176 Sum_probs=70.0
Q ss_pred ChhhhHHHHHHHHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHH
Q 043031 143 PFYQVTVFAGIQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANF 222 (424)
Q Consensus 143 P~~kfa~~tANqaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~f 222 (424)
.++.-+.......+++.+.-.+.-+|+|+|.|.|. +...|+.+.+ .++|| |+. +...++.+.+++...
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~~~-----~~v~~-vD~--s~~~~~~a~~~~~~~ 101 (266)
T 3ujc_A 34 NYISSGGLEATKKILSDIELNENSKVLDIGSGLGG----GCMYINEKYG-----AHTHG-IDI--CSNIVNMANERVSGN 101 (266)
T ss_dssp TCCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSH----HHHHHHHHHC-----CEEEE-EES--CHHHHHHHHHTCCSC
T ss_pred CccccchHHHHHHHHHhcCCCCCCEEEEECCCCCH----HHHHHHHHcC-----CEEEE-EeC--CHHHHHHHHHHhhcC
Confidence 34444444555777887766666799999999884 4555555531 38999 874 555555544433221
Q ss_pred HHhCCCceEEEEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEE
Q 043031 223 AETINLPFPFNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVI 287 (424)
Q Consensus 223 A~~lgvpFeF~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~ 287 (424)
-..+|... ++.++...++..=+|-+...+||+.. .....+|+.+ +.|+|.-.+++
T Consensus 102 -----~~~~~~~~---d~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~~ 157 (266)
T 3ujc_A 102 -----NKIIFEAN---DILTKEFPENNFDLIYSRDAILALSL--ENKNKLFQKCYKWLKPTGTLLI 157 (266)
T ss_dssp -----TTEEEEEC---CTTTCCCCTTCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred -----CCeEEEEC---ccccCCCCCCcEEEEeHHHHHHhcCh--HHHHHHHHHHHHHcCCCCEEEE
Confidence 23344332 33333333343334444556888832 3345666655 66899755544
No 10
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=95.14 E-value=0.44 Score=44.31 Aligned_cols=104 Identities=16% Similarity=0.245 Sum_probs=61.9
Q ss_pred CCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc-eEEEEEecCCCc
Q 043031 163 AKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP-FPFNISFLTDIK 241 (424)
Q Consensus 163 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp-FeF~~v~~~~l~ 241 (424)
.+.-+|+|+|.|.|. +...|+.+ +|. .++|| |+. +...++.+.+++ +..|++ .+|..- ++.
T Consensus 36 ~~~~~vLDiG~G~G~----~~~~l~~~--~~~--~~v~~-vD~--s~~~~~~a~~~~----~~~~~~~~~~~~~---d~~ 97 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGA----QTVILAKN--NPD--AEITS-IDI--SPESLEKARENT----EKNGIKNVKFLQA---NIF 97 (276)
T ss_dssp CTTCEEEETTCTTSH----HHHHHHHH--CTT--SEEEE-EES--CHHHHHHHHHHH----HHTTCCSEEEEEC---CGG
T ss_pred CCCCeEEEecCCCCH----HHHHHHHh--CCC--CEEEE-EEC--CHHHHHHHHHHH----HHcCCCCcEEEEc---ccc
Confidence 345689999999883 45566665 332 58999 874 666666555543 344554 334332 343
Q ss_pred ccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 242 DFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 242 ~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
++...++..=+|-+...|||+.+ .+.+|+.+ +.|+|.-++++.
T Consensus 98 ~~~~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~ 141 (276)
T 3mgg_A 98 SLPFEDSSFDHIFVCFVLEHLQS----PEEALKSLKKVLKPGGTITVI 141 (276)
T ss_dssp GCCSCTTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCCCCCeeEEEEechhhhcCC----HHHHHHHHHHHcCCCcEEEEE
Confidence 44444444444445556788854 34566655 668997665553
No 11
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=94.97 E-value=0.54 Score=46.28 Aligned_cols=113 Identities=16% Similarity=0.150 Sum_probs=63.3
Q ss_pred HHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCC--ceEEE
Q 043031 156 VIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINL--PFPFN 233 (424)
Q Consensus 156 IleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgv--pFeF~ 233 (424)
+++.+-..+.-+|+|+|.|.|. +...|+.+. | .+++|+ ++. ...++.+.++ ++..|+ ..+|.
T Consensus 171 ~l~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~-~D~---~~~~~~a~~~----~~~~~~~~~v~~~ 234 (363)
T 3dp7_A 171 ALEIVFSHHPKRLLDIGGNTGK----WATQCVQYN---K-EVEVTI-VDL---PQQLEMMRKQ----TAGLSGSERIHGH 234 (363)
T ss_dssp HHHHHGGGCCSEEEEESCTTCH----HHHHHHHHS---T-TCEEEE-EEC---HHHHHHHHHH----HTTCTTGGGEEEE
T ss_pred HHHHhcccCCCEEEEeCCCcCH----HHHHHHHhC---C-CCEEEE-EeC---HHHHHHHHHH----HHhcCcccceEEE
Confidence 4444433455799999999885 555666652 4 379999 863 4445555444 344555 35554
Q ss_pred EEecCCCccc--cc-CCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEE-EEeeeC
Q 043031 234 ISFLTDIKDF--ET-NEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMV-VIEVES 291 (424)
Q Consensus 234 ~v~~~~l~~l--~~-~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvv-l~E~ea 291 (424)
.- +..+. .+ ..-++++.+. .||++.+ .....+|+.+ +.|+|.-.+ ++|.-.
T Consensus 235 ~~---d~~~~~~~~p~~~D~v~~~~--vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (363)
T 3dp7_A 235 GA---NLLDRDVPFPTGFDAVWMSQ--FLDCFSE--EEVISILTRVAQSIGKDSKVYIMETLW 290 (363)
T ss_dssp EC---CCCSSSCCCCCCCSEEEEES--CSTTSCH--HHHHHHHHHHHHHCCTTCEEEEEECCT
T ss_pred Ec---cccccCCCCCCCcCEEEEec--hhhhCCH--HHHHHHHHHHHHhcCCCcEEEEEeecc
Confidence 43 22221 12 2234555444 4787753 2344677766 668997644 445433
No 12
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=94.92 E-value=1.2 Score=40.66 Aligned_cols=111 Identities=10% Similarity=0.138 Sum_probs=64.7
Q ss_pred HHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc-eEEEE
Q 043031 156 VIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP-FPFNI 234 (424)
Q Consensus 156 IleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp-FeF~~ 234 (424)
+++.+.-.+.-+|+|+|.|.|. +...|+.+ + + ++|| |+. +...++.+.+++.+ .|++ ++|..
T Consensus 13 ~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~--~-~---~v~~-vD~--s~~~~~~a~~~~~~----~~~~~v~~~~ 75 (239)
T 1xxl_A 13 MIKTAECRAEHRVLDIGAGAGH----TALAFSPY--V-Q---ECIG-VDA--TKEMVEVASSFAQE----KGVENVRFQQ 75 (239)
T ss_dssp HHHHHTCCTTCEEEEESCTTSH----HHHHHGGG--S-S---EEEE-EES--CHHHHHHHHHHHHH----HTCCSEEEEE
T ss_pred HHHHhCcCCCCEEEEEccCcCH----HHHHHHHh--C-C---EEEE-EEC--CHHHHHHHHHHHHH----cCCCCeEEEe
Confidence 3444554556689999999885 44566655 2 2 7999 874 66666666555433 3443 44433
Q ss_pred EecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEE-eee
Q 043031 235 SFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVI-EVE 290 (424)
Q Consensus 235 v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~-E~e 290 (424)
- +..++...++..=+|-|...+||+.+ ...+|+.+ +-|+|.-.+++ +..
T Consensus 76 ~---d~~~~~~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~~~ 126 (239)
T 1xxl_A 76 G---TAESLPFPDDSFDIITCRYAAHHFSD----VRKAVREVARVLKQDGRFLLVDHY 126 (239)
T ss_dssp C---BTTBCCSCTTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred c---ccccCCCCCCcEEEEEECCchhhccC----HHHHHHHHHHHcCCCcEEEEEEcC
Confidence 2 34444444443334444556888753 34555554 67899766555 443
No 13
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=94.70 E-value=0.22 Score=49.05 Aligned_cols=160 Identities=16% Similarity=0.210 Sum_probs=87.6
Q ss_pred HHHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEE
Q 043031 153 IQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPF 232 (424)
Q Consensus 153 NqaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF 232 (424)
.+.|++++.-.+.-+|+|+|-|.|. +..+|+++. | .+|+|. .+. .+.++.+.+++. .+ ..=..+|
T Consensus 168 ~~~~~~~~~~~~~~~v~DvGgG~G~----~~~~l~~~~---p-~~~~~~-~dl---p~v~~~a~~~~~-~~--~~~rv~~ 232 (353)
T 4a6d_A 168 GRSVLTAFDLSVFPLMCDLGGGAGA----LAKECMSLY---P-GCKITV-FDI---PEVVWTAKQHFS-FQ--EEEQIDF 232 (353)
T ss_dssp HHHHHHSSCGGGCSEEEEETCTTSH----HHHHHHHHC---S-SCEEEE-EEC---HHHHHHHHHHSC-C----CCSEEE
T ss_pred HHHHHHhcCcccCCeEEeeCCCCCH----HHHHHHHhC---C-CceeEe-ccC---HHHHHHHHHhhh-hc--ccCceee
Confidence 4577777654445589999999995 667777763 4 489988 653 334544444332 11 1112444
Q ss_pred EEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCe-EEEEeeeCCC--CCCchHHHHHHHHHH
Q 043031 233 NISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCV-MVVIEVESND--NLQTFEDRFFGTLFH 308 (424)
Q Consensus 233 ~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~v-vvl~E~ea~~--ns~~F~~RF~eaL~~ 308 (424)
.+- |..+-.....+++.... .||+..+ .....+|+.+ +.|+|.- ++++|.-.+. +.|.+
T Consensus 233 ~~g---D~~~~~~~~~D~~~~~~--vlh~~~d--~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~---------- 295 (353)
T 4a6d_A 233 QEG---DFFKDPLPEADLYILAR--VLHDWAD--GKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLL---------- 295 (353)
T ss_dssp EES---CTTTSCCCCCSEEEEES--SGGGSCH--HHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHH----------
T ss_pred ecC---ccccCCCCCceEEEeee--ecccCCH--HHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHH----------
Confidence 432 22211222344554443 4787654 2234567666 6799965 5555654332 22211
Q ss_pred HHHHHHhhhhhcCCCchhHHHHHHHHHhHhHHHHHhhcccccccCCCChhhHHHHHhcCCCccccC
Q 043031 309 FGALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAEL 374 (424)
Q Consensus 309 YsalFDsLda~~~~~s~~R~~iE~~~lg~eI~niVaceG~~R~ER~e~~~~W~~r~~~aGF~~~~l 374 (424)
.+++| +.=.+.+.|.+| +.++|+..+++|||+.+.+
T Consensus 296 -~~~~d------------------------l~ml~~~~g~er-----t~~e~~~ll~~AGf~~v~v 331 (353)
T 4a6d_A 296 -TQLYS------------------------LNMLVQTEGQER-----TPTHYHMLLSSAGFRDFQF 331 (353)
T ss_dssp -HHHHH------------------------HHHHHSSSCCCC-----CHHHHHHHHHHHTCEEEEE
T ss_pred -HHHHH------------------------HHHHHhCCCcCC-----CHHHHHHHHHHCCCceEEE
Confidence 11111 111223456555 4579999999999987655
No 14
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=94.68 E-value=1 Score=41.09 Aligned_cols=126 Identities=12% Similarity=0.101 Sum_probs=70.9
Q ss_pred HhcCChhhhHHHHHHHHHHhhhcC-CCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHH
Q 043031 139 YQKVPFYQVTVFAGIQAVIENVSS-AKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIEN 217 (424)
Q Consensus 139 ~e~~P~~kfa~~tANqaIleA~~g-~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~ 217 (424)
|+..+-..-.+......+++.+.+ .+.-+|+|+|.|.|. +...|+.+. | . ++|| |+. +...++.+.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~----~~~~l~~~~---~-~-~v~~-vD~--s~~~~~~a~~ 87 (257)
T 3f4k_A 20 FKLLKRQGPGSPEATRKAVSFINELTDDAKIADIGCGTGG----QTLFLADYV---K-G-QITG-IDL--FPDFIEIFNE 87 (257)
T ss_dssp HTTSSCSSSCCHHHHHHHHTTSCCCCTTCEEEEETCTTSH----HHHHHHHHC---C-S-EEEE-EES--CHHHHHHHHH
T ss_pred HcCccccCCCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCH----HHHHHHHhC---C-C-eEEE-EEC--CHHHHHHHHH
Confidence 333333333333444556666632 334589999999885 445566553 2 2 7999 875 6666665555
Q ss_pred HHHHHHHhCCCc--eEEEEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 218 RLANFAETINLP--FPFNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 218 rL~~fA~~lgvp--FeF~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
+ ++..|++ .+|..- ++.++...++..=+|-|...+||+ + .+.+|+.+ +.|+|.-.+++.
T Consensus 88 ~----~~~~~~~~~~~~~~~---d~~~~~~~~~~fD~v~~~~~l~~~-~----~~~~l~~~~~~L~pgG~l~~~ 149 (257)
T 3f4k_A 88 N----AVKANCADRVKGITG---SMDNLPFQNEELDLIWSEGAIYNI-G----FERGMNEWSKYLKKGGFIAVS 149 (257)
T ss_dssp H----HHHTTCTTTEEEEEC---CTTSCSSCTTCEEEEEEESCSCCC-C----HHHHHHHHHTTEEEEEEEEEE
T ss_pred H----HHHcCCCCceEEEEC---ChhhCCCCCCCEEEEEecChHhhc-C----HHHHHHHHHHHcCCCcEEEEE
Confidence 4 4556765 555433 344444444433344444557887 2 44566665 568997655553
No 15
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=94.46 E-value=2 Score=39.57 Aligned_cols=123 Identities=12% Similarity=0.073 Sum_probs=67.9
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCC----HHHHHHHHHHHHHHHHhCCCc
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPS----KQKFEEIENRLANFAETINLP 229 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~----~~~l~~tg~rL~~fA~~lgvp 229 (424)
..|++.+.-.+.-+|+|+|.|.|. +...|+.+. | | ..++|| |+..+. ...++.+.+++ +..|++
T Consensus 33 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~-g-~-~~~v~g-vD~s~~~~~~~~~~~~a~~~~----~~~~~~ 100 (275)
T 3bkx_A 33 LAIAEAWQVKPGEKILEIGCGQGD----LSAVLADQV-G-S-SGHVTG-IDIASPDYGAPLTLGQAWNHL----LAGPLG 100 (275)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSH----HHHHHHHHH-C-T-TCEEEE-ECSSCTTCCSSSCHHHHHHHH----HTSTTG
T ss_pred HHHHHHcCCCCCCEEEEeCCCCCH----HHHHHHHHh-C-C-CCEEEE-EECCccccccHHHHHHHHHHH----HhcCCC
Confidence 356666654455689999998884 444555552 3 3 258999 885221 12455555554 334442
Q ss_pred --eEEEEEecCCC--cccccCCC--cEEEEeccccccccCCCcchHHHHHHHHHhcCC--CeEEEEeeeCCCCCC
Q 043031 230 --FPFNISFLTDI--KDFETNEG--EVVAVYSPVHLSHMIRKPNCLETFLTELRKINP--CVMVVIEVESNDNLQ 296 (424)
Q Consensus 230 --FeF~~v~~~~l--~~l~~~~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P--~vvvl~E~ea~~ns~ 296 (424)
.+|... ++. .++...++ ++++.+ ..+||+.+ .+.+++.++.|.| ..+++.+.....+.+
T Consensus 101 ~~v~~~~~--d~~~~~~~~~~~~~fD~v~~~--~~l~~~~~----~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~ 167 (275)
T 3bkx_A 101 DRLTVHFN--TNLSDDLGPIADQHFDRVVLA--HSLWYFAS----ANALALLFKNMAAVCDHVDVAEWSMQPTAL 167 (275)
T ss_dssp GGEEEECS--CCTTTCCGGGTTCCCSEEEEE--SCGGGSSC----HHHHHHHHHHHTTTCSEEEEEEECSSCSSG
T ss_pred CceEEEEC--ChhhhccCCCCCCCEEEEEEc--cchhhCCC----HHHHHHHHHHHhCCCCEEEEEEecCCCCch
Confidence 444332 111 11222222 455544 44688754 2358888888887 566666766654433
No 16
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=94.30 E-value=2 Score=39.64 Aligned_cols=114 Identities=21% Similarity=0.304 Sum_probs=65.5
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--eE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--FP 231 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--Fe 231 (424)
..|++.+.-.+.-+|+|+|.|.|. +...|+.+.+ .++|| |+. +...++.+.+++ +..|++ .+
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~-----~~v~g-vD~--s~~~~~~a~~~~----~~~~~~~~~~ 114 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGK----PAVRLATARD-----VRVTG-ISI--SRPQVNQANARA----TAAGLANRVT 114 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSH----HHHHHHHHSC-----CEEEE-EES--CHHHHHHHHHHH----HHTTCTTTEE
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHhcC-----CEEEE-EeC--CHHHHHHHHHHH----HhcCCCcceE
Confidence 445555544455689999998875 4445665532 48999 874 666666555543 445554 44
Q ss_pred EEEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEE-eee
Q 043031 232 FNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVI-EVE 290 (424)
Q Consensus 232 F~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~-E~e 290 (424)
|... +..++...++..=+|-+...+||+.+ ...+|+.+ +-|+|.-.+++ +..
T Consensus 115 ~~~~---d~~~~~~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 115 FSYA---DAMDLPFEDASFDAVWALESLHHMPD----RGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp EEEC---CTTSCCSCTTCEEEEEEESCTTTSSC----HHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred EEEC---ccccCCCCCCCccEEEEechhhhCCC----HHHHHHHHHHHcCCCeEEEEEEee
Confidence 4433 33334333443333344455788753 35667665 56799755444 443
No 17
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=94.29 E-value=0.58 Score=46.45 Aligned_cols=113 Identities=13% Similarity=0.139 Sum_probs=66.6
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhC-C----CceEEEEEecC
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETI-N----LPFPFNISFLT 238 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~l-g----vpFeF~~v~~~ 238 (424)
+.-+|+|+|.|.|. +...|+.+. + |. .++|| |+. +...++.+.+++.+.+... | -..+|..-...
T Consensus 83 ~~~~VLDlGcG~G~----~~~~la~~~-~-~~-~~v~g-vD~--s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~ 152 (383)
T 4fsd_A 83 EGATVLDLGCGTGR----DVYLASKLV-G-EH-GKVIG-VDM--LDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIE 152 (383)
T ss_dssp TTCEEEEESCTTSH----HHHHHHHHH-T-TT-CEEEE-EEC--CHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTT
T ss_pred CCCEEEEecCccCH----HHHHHHHHh-C-CC-CEEEE-EEC--CHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHH
Confidence 34589999999984 334444442 2 22 58999 985 7788888888887776654 4 34455443222
Q ss_pred CCccc---ccCCC--cEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEE-eeeCC
Q 043031 239 DIKDF---ETNEG--EVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVI-EVESN 292 (424)
Q Consensus 239 ~l~~l---~~~~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~-E~ea~ 292 (424)
++.++ .+.++ +.|+.| ..|||+.+ ...+|+.+ +-|+|.-.+++ +...+
T Consensus 153 ~l~~~~~~~~~~~~fD~V~~~--~~l~~~~d----~~~~l~~~~r~LkpgG~l~i~~~~~~ 207 (383)
T 4fsd_A 153 NLATAEPEGVPDSSVDIVISN--CVCNLSTN----KLALFKEIHRVLRDGGELYFSDVYAD 207 (383)
T ss_dssp CGGGCBSCCCCTTCEEEEEEE--SCGGGCSC----HHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred HhhhcccCCCCCCCEEEEEEc--cchhcCCC----HHHHHHHHHHHcCCCCEEEEEEeccc
Confidence 22211 34344 344444 45677743 34566555 67899765554 44443
No 18
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=93.94 E-value=1.1 Score=43.63 Aligned_cols=115 Identities=14% Similarity=0.125 Sum_probs=67.9
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--eE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--FP 231 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--Fe 231 (424)
+.|++.+.-.+.-+|+|+|.|.|. +...|+.+. | .+++|+ ++. ...++.+.+++. ..|++ .+
T Consensus 180 ~~l~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---p-~~~~~~-~D~---~~~~~~a~~~~~----~~~~~~~v~ 243 (359)
T 1x19_A 180 QLLLEEAKLDGVKKMIDVGGGIGD----ISAAMLKHF---P-ELDSTI-LNL---PGAIDLVNENAA----EKGVADRMR 243 (359)
T ss_dssp HHHHHHCCCTTCCEEEEESCTTCH----HHHHHHHHC---T-TCEEEE-EEC---GGGHHHHHHHHH----HTTCTTTEE
T ss_pred HHHHHhcCCCCCCEEEEECCcccH----HHHHHHHHC---C-CCeEEE-Eec---HHHHHHHHHHHH----hcCCCCCEE
Confidence 567777655566799999999986 455566552 3 379999 874 444555555543 34543 55
Q ss_pred EEEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEE-EEeeeC
Q 043031 232 FNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMV-VIEVES 291 (424)
Q Consensus 232 F~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvv-l~E~ea 291 (424)
|..- +..+..+..+++++.+. .||++.+ .....+|+.+ +.|+|.-.+ ++|...
T Consensus 244 ~~~~---d~~~~~~~~~D~v~~~~--vlh~~~d--~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 244 GIAV---DIYKESYPEADAVLFCR--ILYSANE--QLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp EEEC---CTTTSCCCCCSEEEEES--CGGGSCH--HHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred EEeC---ccccCCCCCCCEEEEec--hhccCCH--HHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 5443 33333333445555544 4677743 2345677766 567996554 556543
No 19
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=93.82 E-value=1.8 Score=41.16 Aligned_cols=110 Identities=15% Similarity=0.196 Sum_probs=64.9
Q ss_pred HHHHhhhc-CCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--e
Q 043031 154 QAVIENVS-SAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--F 230 (424)
Q Consensus 154 qaIleA~~-g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--F 230 (424)
+.|++.+. -.+.-+|+|+|.|.|. +...|+.+.+ .++|| |+. +...++.+.++ ++..|++ .
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~----~~~~la~~~~-----~~v~g-vD~--s~~~~~~a~~~----~~~~~~~~~v 169 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGG----SMVMAHRRFG-----SRVEG-VTL--SAAQADFGNRR----ARELRIDDHV 169 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSH----HHHHHHHHHC-----CEEEE-EES--CHHHHHHHHHH----HHHTTCTTTE
T ss_pred HHHHHHhccCCCCCEEEEecCCCCH----HHHHHHHHcC-----CEEEE-EeC--CHHHHHHHHHH----HHHcCCCCce
Confidence 34666665 3445689999998883 4555666532 47999 874 66666665555 3455665 5
Q ss_pred EEEEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEE
Q 043031 231 PFNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVI 287 (424)
Q Consensus 231 eF~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~ 287 (424)
+|..- ++.++...++..=+|-+...+||+ + ...+|+.+ +.|+|.-.+++
T Consensus 170 ~~~~~---d~~~~~~~~~~fD~V~~~~~l~~~-~----~~~~l~~~~~~LkpgG~l~~ 219 (312)
T 3vc1_A 170 RSRVC---NMLDTPFDKGAVTASWNNESTMYV-D----LHDLFSEHSRFLKVGGRYVT 219 (312)
T ss_dssp EEEEC---CTTSCCCCTTCEEEEEEESCGGGS-C----HHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEC---ChhcCCCCCCCEeEEEECCchhhC-C----HHHHHHHHHHHcCCCcEEEE
Confidence 55443 333333333433333344557887 3 45566555 67899655554
No 20
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=93.52 E-value=0.41 Score=42.22 Aligned_cols=98 Identities=17% Similarity=0.143 Sum_probs=58.0
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcccc
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFE 244 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~ 244 (424)
.-.|+|+|.|.|. +...|+.+ | .++|| |+. +...++.+.++ .-..+|.. .++.++.
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~----~~v~g-vD~--s~~~~~~a~~~--------~~~~~~~~---~d~~~~~ 97 (203)
T 3h2b_A 42 DGVILDVGSGTGR----WTGHLASL--G----HQIEG-LEP--ATRLVELARQT--------HPSVTFHH---GTITDLS 97 (203)
T ss_dssp CSCEEEETCTTCH----HHHHHHHT--T----CCEEE-ECC--CHHHHHHHHHH--------CTTSEEEC---CCGGGGG
T ss_pred CCeEEEecCCCCH----HHHHHHhc--C----CeEEE-EeC--CHHHHHHHHHh--------CCCCeEEe---Ccccccc
Confidence 4579999999986 56667766 2 26999 875 66666555544 11233322 2444444
Q ss_pred cCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 245 TNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 245 ~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
..++..=+|-|...|||+.. .....+|+.+ +.|+|.-.+++.
T Consensus 98 ~~~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~i~ 140 (203)
T 3h2b_A 98 DSPKRWAGLLAWYSLIHMGP--GELPDALVALRMAVEDGGGLLMS 140 (203)
T ss_dssp GSCCCEEEEEEESSSTTCCT--TTHHHHHHHHHHTEEEEEEEEEE
T ss_pred cCCCCeEEEEehhhHhcCCH--HHHHHHHHHHHHHcCCCcEEEEE
Confidence 44443334444456888852 2355666655 668997666654
No 21
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=93.25 E-value=0.19 Score=45.94 Aligned_cols=115 Identities=12% Similarity=0.145 Sum_probs=65.7
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFN 233 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~ 233 (424)
..+++.+...+.-+|+|+|.|.|. +...|+.+. . .++|| |+. +...++.+.+++.+. -..+|.
T Consensus 83 ~~~l~~l~~~~~~~vLDiG~G~G~----~~~~l~~~~---~--~~v~~-vD~--s~~~~~~a~~~~~~~-----~~~~~~ 145 (254)
T 1xtp_A 83 RNFIASLPGHGTSRALDCGAGIGR----ITKNLLTKL---Y--ATTDL-LEP--VKHMLEEAKRELAGM-----PVGKFI 145 (254)
T ss_dssp HHHHHTSTTCCCSEEEEETCTTTH----HHHHTHHHH---C--SEEEE-EES--CHHHHHHHHHHTTTS-----SEEEEE
T ss_pred HHHHHhhcccCCCEEEEECCCcCH----HHHHHHHhh---c--CEEEE-EeC--CHHHHHHHHHHhccC-----CceEEE
Confidence 556666655566799999999886 444455442 2 37999 874 666666665554321 223333
Q ss_pred EEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEeee
Q 043031 234 ISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEVE 290 (424)
Q Consensus 234 ~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~e 290 (424)
. .++.++...++..=+|-|...|||+.+ .....+|+.+ +.|+|.-.+++...
T Consensus 146 ~---~d~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 146 L---ASMETATLPPNTYDLIVIQWTAIYLTD--ADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp E---SCGGGCCCCSSCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred E---ccHHHCCCCCCCeEEEEEcchhhhCCH--HHHHHHHHHHHHhcCCCeEEEEEec
Confidence 2 244444433343323334456888853 2345566554 77899766666443
No 22
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=93.13 E-value=0.71 Score=41.27 Aligned_cols=113 Identities=19% Similarity=0.274 Sum_probs=66.4
Q ss_pred HHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc------
Q 043031 156 VIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP------ 229 (424)
Q Consensus 156 IleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp------ 229 (424)
|++.+...+.-.|+|+|.|.|. +...|+.+ +|. .++|| |+. +...++.+.+++ +..|++
T Consensus 21 l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~--~~~--~~v~g-vD~--s~~~~~~a~~~~----~~~~~~~~~~~~ 85 (217)
T 3jwh_A 21 VVAALKQSNARRVIDLGCGQGN----LLKILLKD--SFF--EQITG-VDV--SYRSLEIAQERL----DRLRLPRNQWER 85 (217)
T ss_dssp HHHHHHHTTCCEEEEETCTTCH----HHHHHHHC--TTC--SEEEE-EES--CHHHHHHHHHHH----TTCCCCHHHHTT
T ss_pred HHHHHHhcCCCEEEEeCCCCCH----HHHHHHhh--CCC--CEEEE-EEC--CHHHHHHHHHHH----HHhcCCcccCcc
Confidence 3444433344589999999885 55667765 332 58999 885 666676666654 334443
Q ss_pred eEEEEEecCCCcccccC--CCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEeee
Q 043031 230 FPFNISFLTDIKDFETN--EGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEVE 290 (424)
Q Consensus 230 FeF~~v~~~~l~~l~~~--~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~e 290 (424)
.+|..- ++..+... .=++++.+ ..|||+.+ .....+|+.+ +.|+|.-++++..+
T Consensus 86 v~~~~~---d~~~~~~~~~~fD~v~~~--~~l~~~~~--~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 86 LQLIQG---ALTYQDKRFHGYDAATVI--EVIEHLDL--SRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp EEEEEC---CTTSCCGGGCSCSEEEEE--SCGGGCCH--HHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred eEEEeC---CcccccccCCCcCEEeeH--HHHHcCCH--HHHHHHHHHHHHHcCCCEEEEEccC
Confidence 444433 33222221 22344433 45788832 3356777766 56899987777665
No 23
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=93.04 E-value=0.55 Score=42.00 Aligned_cols=119 Identities=20% Similarity=0.202 Sum_probs=69.5
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCC-----
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINL----- 228 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgv----- 228 (424)
+.|++.+...+.-.|+|+|.|.|. +...|+.+ +|. .++|| |+. +...++.+.+++.. .++
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~--~~~--~~v~g-vD~--s~~~~~~a~~~~~~----~~~~~~~~ 83 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGN----LLSLLLKD--KSF--EQITG-VDV--SYSVLERAKDRLKI----DRLPEMQR 83 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCH----HHHHHHTS--TTC--CEEEE-EES--CHHHHHHHHHHHTG----GGSCHHHH
T ss_pred HHHHHHHhhcCCCEEEEecCCCCH----HHHHHHhc--CCC--CEEEE-EEC--CHHHHHHHHHHHHh----hccccccC
Confidence 334444443445589999999886 56667665 332 58999 985 67777766665432 222
Q ss_pred -ceEEEEEecCCCcccccCCC--cEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEeeeCCCC
Q 043031 229 -PFPFNISFLTDIKDFETNEG--EVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEVESNDN 294 (424)
Q Consensus 229 -pFeF~~v~~~~l~~l~~~~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~ea~~n 294 (424)
..+|..- ++.++...++ ++++ |...|||+.+ ..+..+|+.+ +.|+|.-++++..+..+|
T Consensus 84 ~~v~~~~~---d~~~~~~~~~~fD~V~--~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~~i~~~~~~~~ 146 (219)
T 3jwg_A 84 KRISLFQS---SLVYRDKRFSGYDAAT--VIEVIEHLDE--NRLQAFEKVLFEFTRPQTVIVSTPNKEYN 146 (219)
T ss_dssp TTEEEEEC---CSSSCCGGGTTCSEEE--EESCGGGCCH--HHHHHHHHHHHTTTCCSEEEEEEEBGGGG
T ss_pred cceEEEeC---cccccccccCCCCEEE--EHHHHHhCCH--HHHHHHHHHHHHhhCCCEEEEEccchhhh
Confidence 2344332 3333222222 3444 4455788842 2345677665 678999888877765444
No 24
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=92.83 E-value=1.3 Score=39.47 Aligned_cols=106 Identities=16% Similarity=0.267 Sum_probs=59.5
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCC------ceEEEEEecC
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINL------PFPFNISFLT 238 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgv------pFeF~~v~~~ 238 (424)
.-.|+|+|.|.|. +...|+.+ | .++|| |+. +...++.+.++ ++..++ ..+|...
T Consensus 31 ~~~vLdiG~G~G~----~~~~l~~~--~----~~v~~-vD~--s~~~~~~a~~~----~~~~~~~~~~~~~~~~~~~--- 90 (235)
T 3sm3_A 31 DDEILDIGCGSGK----ISLELASK--G----YSVTG-IDI--NSEAIRLAETA----ARSPGLNQKTGGKAEFKVE--- 90 (235)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT--T----CEEEE-EES--CHHHHHHHHHH----TTCCSCCSSSSCEEEEEEC---
T ss_pred CCeEEEECCCCCH----HHHHHHhC--C----CeEEE-EEC--CHHHHHHHHHH----HHhcCCccccCcceEEEEe---
Confidence 3479999999884 45556665 2 37999 874 55555544433 344555 2344333
Q ss_pred CCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEE-eeeC
Q 043031 239 DIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVI-EVES 291 (424)
Q Consensus 239 ~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~-E~ea 291 (424)
+..++...++..=+|-+...|||+.+ +..+..+|+.+ +.|+|.-.+++ +...
T Consensus 91 d~~~~~~~~~~~D~v~~~~~l~~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 91 NASSLSFHDSSFDFAVMQAFLTSVPD-PKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp CTTSCCSCTTCEEEEEEESCGGGCCC-HHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred cccccCCCCCceeEEEEcchhhcCCC-HHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 33333333343333334456788764 33344677665 66899765544 4433
No 25
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=92.82 E-value=0.99 Score=43.37 Aligned_cols=114 Identities=11% Similarity=0.150 Sum_probs=61.5
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFN 233 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~ 233 (424)
..|++.+.-.+ .+|+|+|.|.|. +...|+.+. | .+++|+ ++. ...++.+.+++.+.-- .-..+|.
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~-~D~---~~~~~~a~~~~~~~~~--~~~v~~~ 222 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGE----LTKAILQAE---P-SARGVM-LDR---EGSLGVARDNLSSLLA--GERVSLV 222 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCH----HHHHHHHHC---T-TCEEEE-EEC---TTCTHHHHHHTHHHHH--TTSEEEE
T ss_pred HHHHHhCCCCC-CEEEEeCCCchH----HHHHHHHHC---C-CCEEEE-eCc---HHHHHHHHHHHhhcCC--CCcEEEe
Confidence 55666654334 799999999994 555666653 3 269999 875 2334444444433211 1124444
Q ss_pred EEecCCCcc-cccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEE-EEeee
Q 043031 234 ISFLTDIKD-FETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMV-VIEVE 290 (424)
Q Consensus 234 ~v~~~~l~~-l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvv-l~E~e 290 (424)
.- ++.+ +. ..-++++.+ ..||+..+ .....+|+.+ +.|+|.-.+ ++|..
T Consensus 223 ~~---d~~~~~~-~~~D~v~~~--~vl~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 223 GG---DMLQEVP-SNGDIYLLS--RIIGDLDE--AASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp ES---CTTTCCC-SSCSEEEEE--SCGGGCCH--HHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred cC---CCCCCCC-CCCCEEEEc--hhccCCCH--HHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 33 2222 22 112444444 44777643 2334667666 668997544 44543
No 26
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=92.82 E-value=0.54 Score=41.92 Aligned_cols=108 Identities=12% Similarity=0.183 Sum_probs=60.8
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFN 233 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~ 233 (424)
..+++.+...+.-.|+|+|.|.|. +...|+.+ + .++|| |+. +...++.+.+++. -++. |.
T Consensus 35 ~~~l~~~~~~~~~~vLDiGcG~G~----~~~~l~~~--~----~~v~~-vD~--s~~~~~~a~~~~~-----~~~~--~~ 94 (220)
T 3hnr_A 35 EDILEDVVNKSFGNVLEFGVGTGN----LTNKLLLA--G----RTVYG-IEP--SREMRMIAKEKLP-----KEFS--IT 94 (220)
T ss_dssp HHHHHHHHHTCCSEEEEECCTTSH----HHHHHHHT--T----CEEEE-ECS--CHHHHHHHHHHSC-----TTCC--EE
T ss_pred HHHHHHhhccCCCeEEEeCCCCCH----HHHHHHhC--C----CeEEE-EeC--CHHHHHHHHHhCC-----CceE--EE
Confidence 355555554466789999999884 56666666 2 47999 874 6666655544432 1232 32
Q ss_pred EEecCCCccccc-CCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 234 ISFLTDIKDFET-NEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 234 ~v~~~~l~~l~~-~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
. .++.++.. ..=+.++.+ ..|||+.+ + ....+|+.+ +.|+|.-.+++.
T Consensus 95 ~---~d~~~~~~~~~fD~v~~~--~~l~~~~~-~-~~~~~l~~~~~~LkpgG~l~i~ 144 (220)
T 3hnr_A 95 E---GDFLSFEVPTSIDTIVST--YAFHHLTD-D-EKNVAIAKYSQLLNKGGKIVFA 144 (220)
T ss_dssp S---CCSSSCCCCSCCSEEEEE--SCGGGSCH-H-HHHHHHHHHHHHSCTTCEEEEE
T ss_pred e---CChhhcCCCCCeEEEEEC--cchhcCCh-H-HHHHHHHHHHHhcCCCCEEEEE
Confidence 2 23333222 222455544 45788753 1 122355554 678997665554
No 27
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=92.66 E-value=2 Score=41.49 Aligned_cols=115 Identities=14% Similarity=0.165 Sum_probs=65.5
Q ss_pred HHHhhhcCCC-eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--eE
Q 043031 155 AVIENVSSAK-KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--FP 231 (424)
Q Consensus 155 aIleA~~g~~-~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--Fe 231 (424)
.+++.+.-.+ ..+|+|+|.|.|. +...|+.+. | .+++|+ ++. ...++.+.+++ +..++. .+
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~-~D~---~~~~~~a~~~~----~~~~~~~~v~ 232 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGT----YLAQVLRRH---P-QLTGQI-WDL---PTTRDAARKTI----HAHDLGGRVE 232 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCH----HHHHHHHHC---T-TCEEEE-EEC---GGGHHHHHHHH----HHTTCGGGEE
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCH----HHHHHHHhC---C-CCeEEE-EEC---HHHHHHHHHHH----HhcCCCCceE
Confidence 5777765444 7899999999985 566666652 3 379999 874 23444444443 344553 55
Q ss_pred EEEEecCCCcccc-cCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEE-EEeee
Q 043031 232 FNISFLTDIKDFE-TNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMV-VIEVE 290 (424)
Q Consensus 232 F~~v~~~~l~~l~-~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvv-l~E~e 290 (424)
|..- ++.+.. ..++..=+|-+...||++.+ .....+|+.+ +.|+|.-.+ ++|.-
T Consensus 233 ~~~~---d~~~~~~~~~~~~D~v~~~~vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 233 FFEK---NLLDARNFEGGAADVVMLNDCLHYFDA--REAREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp EEEC---CTTCGGGGTTCCEEEEEEESCGGGSCH--HHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEeC---CcccCcccCCCCccEEEEecccccCCH--HHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 5443 332221 01222333444456788743 2345677766 678996554 44543
No 28
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=92.43 E-value=2.4 Score=41.21 Aligned_cols=113 Identities=20% Similarity=0.227 Sum_probs=64.2
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--eE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--FP 231 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--Fe 231 (424)
..|++.+.-.+..+|+|+|.|.| .+...|+.+. | .+++|+ ++. ...++.+.+++. ..|++ .+
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---~-~~~~~~-~D~---~~~~~~a~~~~~----~~~~~~~v~ 235 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNG----GMLAAIALRA---P-HLRGTL-VEL---AGPAERARRRFA----DAGLADRVT 235 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTS----HHHHHHHHHC---T-TCEEEE-EEC---HHHHHHHHHHHH----HTTCTTTEE
T ss_pred HHHHHhCCCCCCCEEEEECCCcC----HHHHHHHHHC---C-CCEEEE-EeC---HHHHHHHHHHHH----hcCCCCceE
Confidence 34566554455679999999999 4666666653 3 379999 863 455655555543 34553 55
Q ss_pred EEEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCe-EEEEee
Q 043031 232 FNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCV-MVVIEV 289 (424)
Q Consensus 232 F~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~v-vvl~E~ 289 (424)
|..- ++.+ .+ ++..=+|-+...|||+.+ .....+|+.+ +.|+|.- ++++|.
T Consensus 236 ~~~~---d~~~-~~-~~~~D~v~~~~vl~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 236 VAEG---DFFK-PL-PVTADVVLLSFVLLNWSD--EDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEC---CTTS-CC-SCCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEeC---CCCC-cC-CCCCCEEEEeccccCCCH--HHHHHHHHHHHHhcCCCcEEEEEec
Confidence 5443 2222 11 121223334445787643 1233566655 6689976 455565
No 29
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=91.90 E-value=2.6 Score=37.85 Aligned_cols=99 Identities=15% Similarity=0.111 Sum_probs=57.0
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcccc
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFE 244 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~ 244 (424)
.-+|+|+|.|.|. +...|+.+ | .++|| |+. +...++.+.++. .+-..+|... ++.++.
T Consensus 54 ~~~vLDiG~G~G~----~~~~l~~~--~----~~v~~-vD~--s~~~~~~a~~~~------~~~~~~~~~~---d~~~~~ 111 (242)
T 3l8d_A 54 EAEVLDVGCGDGY----GTYKLSRT--G----YKAVG-VDI--SEVMIQKGKERG------EGPDLSFIKG---DLSSLP 111 (242)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT--T----CEEEE-EES--CHHHHHHHHTTT------CBTTEEEEEC---BTTBCS
T ss_pred CCeEEEEcCCCCH----HHHHHHHc--C----CeEEE-EEC--CHHHHHHHHhhc------ccCCceEEEc---chhcCC
Confidence 3489999999885 55566666 2 37999 874 555555444331 1233444433 333344
Q ss_pred cCCCcEEEEeccccccccCCCcchHHHHHHH-HHhcCCCeEEEEee
Q 043031 245 TNEGEVVAVYSPVHLSHMIRKPNCLETFLTE-LRKINPCVMVVIEV 289 (424)
Q Consensus 245 ~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvl~E~ 289 (424)
..++..=+|-|...|||+.+ ...+|+. .+.|+|.-.+++..
T Consensus 112 ~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 112 FENEQFEAIMAINSLEWTEE----PLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp SCTTCEEEEEEESCTTSSSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCccEEEEcChHhhccC----HHHHHHHHHHHhCCCeEEEEEE
Confidence 43444444445566888743 3345554 47789976666544
No 30
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=91.80 E-value=1.3 Score=43.62 Aligned_cols=108 Identities=15% Similarity=0.140 Sum_probs=60.0
Q ss_pred HHHHhhhc-CCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEE
Q 043031 154 QAVIENVS-SAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPF 232 (424)
Q Consensus 154 qaIleA~~-g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF 232 (424)
..|++.+. -.+.-+|+|+|-|.|. +...|+.+. | .+++|+ ++. ...++. |+.. -..+|
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~-~D~---~~~~~~--------a~~~-~~v~~ 248 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGA----TVAAIAAHY---P-TIKGVN-FDL---PHVISE--------APQF-PGVTH 248 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSH----HHHHHHHHC---T-TCEEEE-EEC---HHHHTT--------CCCC-TTEEE
T ss_pred HHHHHhcccccCCCEEEEeCCCCCH----HHHHHHHHC---C-CCeEEE-ecC---HHHHHh--------hhhc-CCeEE
Confidence 44666665 3456799999999985 555666553 4 378999 764 222222 2221 12444
Q ss_pred EEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEE-EEeee
Q 043031 233 NISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMV-VIEVE 290 (424)
Q Consensus 233 ~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvv-l~E~e 290 (424)
..- ++.+ .+..+++++.. ..||++.+ .....+|+.+ +.|+|.-.+ ++|.-
T Consensus 249 ~~~---D~~~-~~p~~D~v~~~--~vlh~~~d--~~~~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 249 VGG---DMFK-EVPSGDTILMK--WILHDWSD--QHCATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp EEC---CTTT-CCCCCSEEEEE--SCGGGSCH--HHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EeC---CcCC-CCCCCCEEEeh--HHhccCCH--HHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 433 3322 12234555444 34788754 2345677776 668996544 44543
No 31
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=91.69 E-value=2 Score=40.10 Aligned_cols=112 Identities=13% Similarity=0.159 Sum_probs=67.0
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEE
Q 043031 155 AVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNI 234 (424)
Q Consensus 155 aIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~ 234 (424)
.+++.+...+.-+|+|+|.|.|. +...|+.+ | .++|| |+. +...++.+.+++ +..|+..+|..
T Consensus 111 ~~~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--g----~~v~~-vD~--s~~~~~~a~~~~----~~~~~~~~~~~ 173 (286)
T 3m70_A 111 DVVDAAKIISPCKVLDLGCGQGR----NSLYLSLL--G----YDVTS-WDH--NENSIAFLNETK----EKENLNISTAL 173 (286)
T ss_dssp HHHHHHHHSCSCEEEEESCTTCH----HHHHHHHT--T----CEEEE-EES--CHHHHHHHHHHH----HHTTCCEEEEE
T ss_pred HHHHHhhccCCCcEEEECCCCCH----HHHHHHHC--C----CeEEE-EEC--CHHHHHHHHHHH----HHcCCceEEEE
Confidence 45555544456789999999985 55556666 2 37999 885 666666665543 44566555544
Q ss_pred EecCCCcccccCCC--cEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEeeeC
Q 043031 235 SFLTDIKDFETNEG--EVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEVES 291 (424)
Q Consensus 235 v~~~~l~~l~~~~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~ea 291 (424)
- ++.++.. ++ +.++.| ..+||+.. ..+..+|+.+ +.|+|.-++++....
T Consensus 174 ~---d~~~~~~-~~~fD~i~~~--~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~ 225 (286)
T 3m70_A 174 Y---DINAANI-QENYDFIVST--VVFMFLNR--ERVPSIIKNMKEHTNVGGYNLIVAAM 225 (286)
T ss_dssp C---CGGGCCC-CSCEEEEEEC--SSGGGSCG--GGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred e---ccccccc-cCCccEEEEc--cchhhCCH--HHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 3 3333222 33 344444 45788742 3456677665 677998765554433
No 32
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=91.17 E-value=1.2 Score=43.82 Aligned_cols=116 Identities=16% Similarity=0.145 Sum_probs=65.7
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCC--ceE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINL--PFP 231 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgv--pFe 231 (424)
..|++.+.-.+..+|+|+|.|.|. +...|+.+ . | .+++|+ ++. ...++.+.+++. ..|+ ..+
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~--~-p-~~~~~~-~D~---~~~~~~a~~~~~----~~~l~~~v~ 255 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGS----LMAAVLDA--F-P-GLRGTL-LER---PPVAEEARELLT----GRGLADRCE 255 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHH--C-T-TCEEEE-EEC---HHHHHHHHHHHH----HTTCTTTEE
T ss_pred HHHHHhCCCccCcEEEEeCCCccH----HHHHHHHH--C-C-CCeEEE-EcC---HHHHHHHHHhhh----hcCcCCceE
Confidence 456666655567899999999995 55666665 2 4 379999 863 445555555543 3444 355
Q ss_pred EEEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEE-EEeeeCC
Q 043031 232 FNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMV-VIEVESN 292 (424)
Q Consensus 232 F~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvv-l~E~ea~ 292 (424)
|..-... +.+.. .-++++.+. .||+..+ .....+|+.+ +.|+|.-.+ ++|.-.+
T Consensus 256 ~~~~d~~--~~~p~-~~D~v~~~~--vlh~~~d--~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 256 ILPGDFF--ETIPD-GADVYLIKH--VLHDWDD--DDVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp EEECCTT--TCCCS-SCSEEEEES--CGGGSCH--HHHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred EeccCCC--CCCCC-CceEEEhhh--hhccCCH--HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 5554221 11222 224444443 4677643 2234677766 567996544 4454433
No 33
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=90.96 E-value=1.9 Score=40.09 Aligned_cols=107 Identities=17% Similarity=0.291 Sum_probs=60.0
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEE
Q 043031 155 AVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNI 234 (424)
Q Consensus 155 aIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~ 234 (424)
.+++.+...+.-.|+|+|.|.|. +...|+. |. .++|| |+. +...++.+.+++ -++ +|..
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~-----~~-~~v~g-vD~--s~~~~~~a~~~~------~~~--~~~~ 106 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQ----LTEKIAQ-----SG-AEVLG-TDN--AATMIEKARQNY------PHL--HFDV 106 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSH----HHHHHHH-----TT-CEEEE-EES--CHHHHHHHHHHC------TTS--CEEE
T ss_pred HHHHHhCCCCCCEEEEecCCCCH----HHHHHHh-----CC-CeEEE-EEC--CHHHHHHHHhhC------CCC--EEEE
Confidence 34555544455689999999885 3344444 22 48999 875 666666555443 233 3333
Q ss_pred EecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEeee
Q 043031 235 SFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEVE 290 (424)
Q Consensus 235 v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~e 290 (424)
. +..++.. ++..=+|-+...|||+.+ ...+|+.+ +.|+|.-.+++..-
T Consensus 107 ~---d~~~~~~-~~~fD~v~~~~~l~~~~d----~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 107 A---DARNFRV-DKPLDAVFSNAMLHWVKE----PEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp C---CTTTCCC-SSCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C---ChhhCCc-CCCcCEEEEcchhhhCcC----HHHHHHHHHHhcCCCcEEEEEec
Confidence 2 3333332 232323334456788753 34555544 77899876666543
No 34
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=90.95 E-value=3.6 Score=37.84 Aligned_cols=126 Identities=12% Similarity=0.082 Sum_probs=73.2
Q ss_pred HHhcCChhhhHHHHHHHHHHhhhc-CCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHH
Q 043031 138 CYQKVPFYQVTVFAGIQAVIENVS-SAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIE 216 (424)
Q Consensus 138 ~~e~~P~~kfa~~tANqaIleA~~-g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg 216 (424)
.|+..+...-.+......+++.+. -.+.-+|+|+|.|.|. +...|+.+ | ..++|| |+. +...++.+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~----~~~~la~~----~-~~~v~g-vD~--s~~~~~~a~ 86 (267)
T 3kkz_A 19 FFSNMERQGPGSPEVTLKALSFIDNLTEKSLIADIGCGTGG----QTMVLAGH----V-TGQVTG-LDF--LSGFIDIFN 86 (267)
T ss_dssp HHHTSSCSSSCCHHHHHHHHTTCCCCCTTCEEEEETCTTCH----HHHHHHTT----C-SSEEEE-EES--CHHHHHHHH
T ss_pred HHhhccccCCCCHHHHHHHHHhcccCCCCCEEEEeCCCCCH----HHHHHHhc----c-CCEEEE-EeC--CHHHHHHHH
Confidence 344444333333344455666655 2445689999998874 55667766 2 258999 875 666666665
Q ss_pred HHHHHHHHhCCCc--eEEEEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEE
Q 043031 217 NRLANFAETINLP--FPFNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVI 287 (424)
Q Consensus 217 ~rL~~fA~~lgvp--FeF~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~ 287 (424)
+++ +..|++ .+|... ++.++...++..=+|-|...+||+ + ...+|+.+ +.|+|.-.+++
T Consensus 87 ~~~----~~~~~~~~v~~~~~---d~~~~~~~~~~fD~i~~~~~~~~~-~----~~~~l~~~~~~LkpgG~l~~ 148 (267)
T 3kkz_A 87 RNA----RQSGLQNRVTGIVG---SMDDLPFRNEELDLIWSEGAIYNI-G----FERGLNEWRKYLKKGGYLAV 148 (267)
T ss_dssp HHH----HHTTCTTTEEEEEC---CTTSCCCCTTCEEEEEESSCGGGT-C----HHHHHHHHGGGEEEEEEEEE
T ss_pred HHH----HHcCCCcCcEEEEc---ChhhCCCCCCCEEEEEEcCCceec-C----HHHHHHHHHHHcCCCCEEEE
Confidence 554 455665 555443 344444444434444455567887 3 35566655 66799755554
No 35
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=90.72 E-value=9.3 Score=35.89 Aligned_cols=102 Identities=12% Similarity=0.155 Sum_probs=60.5
Q ss_pred eEEEeccCCC---CCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcc
Q 043031 166 IHIIDLATRT---GSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKD 242 (424)
Q Consensus 166 VHIIDf~i~~---G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~ 242 (424)
-+|+|+|.|. |. + .+.+..+ . |. .|+|+ |+. +...++.+.+++.. +-..+|..- ++.+
T Consensus 79 ~~vLDlGcG~pt~G~-~---~~~~~~~--~-p~-~~v~~-vD~--sp~~l~~Ar~~~~~-----~~~v~~~~~---D~~~ 139 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQN-T---HEVAQSV--N-PD-ARVVY-VDI--DPMVLTHGRALLAK-----DPNTAVFTA---DVRD 139 (274)
T ss_dssp CEEEEETCCSCCSSC-H---HHHHHHH--C-TT-CEEEE-EES--SHHHHHHHHHHHTT-----CTTEEEEEC---CTTC
T ss_pred CEEEEECCCCCCCCh-H---HHHHHHh--C-CC-CEEEE-EEC--ChHHHHHHHHhcCC-----CCCeEEEEe---eCCC
Confidence 4899999998 73 3 2333333 2 32 69999 884 66777777666621 112444433 3322
Q ss_pred c-----------ccCCCcEEEEeccccccccCCCcchHHHHHHHHHh-cCCCeEEEEe
Q 043031 243 F-----------ETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRK-INPCVMVVIE 288 (424)
Q Consensus 243 l-----------~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~-L~P~vvvl~E 288 (424)
. .+..+...+|-+...|||+.+. ....+|+.+++ |+|.-.+++.
T Consensus 140 ~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~--~~~~~l~~~~~~L~pGG~l~i~ 195 (274)
T 2qe6_A 140 PEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPD--VVDRVVGAYRDALAPGSYLFMT 195 (274)
T ss_dssp HHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTT--THHHHHHHHHHHSCTTCEEEEE
T ss_pred chhhhccchhhccCCCCCCEEEEEechhhhCCcH--HHHHHHHHHHHhCCCCcEEEEE
Confidence 1 1222345666677779999764 35677877755 9997554443
No 36
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=90.61 E-value=3.7 Score=40.33 Aligned_cols=108 Identities=12% Similarity=0.137 Sum_probs=59.8
Q ss_pred HHHHhhhc-CCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEE
Q 043031 154 QAVIENVS-SAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPF 232 (424)
Q Consensus 154 qaIleA~~-g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF 232 (424)
..|++.+. -.+.-+|+|+|.|.|. +...|+.+. | .+++|+ ++. ...++. |+.. -..+|
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~-~D~---~~~~~~--------a~~~-~~v~~ 250 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGA----VASMIVAKY---P-SINAIN-FDL---PHVIQD--------APAF-SGVEH 250 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSH----HHHHHHHHC---T-TCEEEE-EEC---HHHHTT--------CCCC-TTEEE
T ss_pred HHHHHhcccccCCCEEEEeCCCcCH----HHHHHHHhC---C-CCEEEE-Eeh---HHHHHh--------hhhc-CCCEE
Confidence 34666654 3445799999999885 556666653 4 378999 763 222222 2221 12344
Q ss_pred EEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCe-EEEEeee
Q 043031 233 NISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCV-MVVIEVE 290 (424)
Q Consensus 233 ~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~v-vvl~E~e 290 (424)
..- ++.+ ....+++++.+. .||++.+ .....+|+.+ +.|+|.- ++++|.-
T Consensus 251 ~~~---d~~~-~~p~~D~v~~~~--vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 251 LGG---DMFD-GVPKGDAIFIKW--ICHDWSD--EHCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp EEC---CTTT-CCCCCSEEEEES--CGGGBCH--HHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred Eec---CCCC-CCCCCCEEEEec--hhhcCCH--HHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 332 3322 122345555444 4788754 2344677766 6789975 4455544
No 37
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=90.60 E-value=3.1 Score=37.79 Aligned_cols=112 Identities=11% Similarity=0.140 Sum_probs=67.7
Q ss_pred HHHHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceE
Q 043031 152 GIQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFP 231 (424)
Q Consensus 152 ANqaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFe 231 (424)
.-+.|++.+...+.-.|+|+|.|.|. +...|+.+ | +. ++|| |+. +...++.+.+++. +-..+
T Consensus 32 ~~~~l~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--~-~~--~v~~-vD~--s~~~~~~a~~~~~------~~~~~ 93 (253)
T 3g5l_A 32 EWHELKKMLPDFNQKTVLDLGCGFGW----HCIYAAEH--G-AK--KVLG-IDL--SERMLTEAKRKTT------SPVVC 93 (253)
T ss_dssp HHHHHHTTCCCCTTCEEEEETCTTCH----HHHHHHHT--T-CS--EEEE-EES--CHHHHHHHHHHCC------CTTEE
T ss_pred hHHHHHHhhhccCCCEEEEECCCCCH----HHHHHHHc--C-CC--EEEE-EEC--CHHHHHHHHHhhc------cCCeE
Confidence 34566666665567789999999984 55666666 3 22 7999 874 6666665555433 23344
Q ss_pred EEEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 232 FNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 232 F~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
|... ++.++...++..=+|-|...|||+.+ ...+|+.+ +.|+|.-.+++.
T Consensus 94 ~~~~---d~~~~~~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 94 YEQK---AIEDIAIEPDAYNVVLSSLALHYIAS----FDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEC---CGGGCCCCTTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEc---chhhCCCCCCCeEEEEEchhhhhhhh----HHHHHHHHHHHcCCCcEEEEE
Confidence 4433 33344443443334444456888833 45667665 568998777764
No 38
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=90.44 E-value=1.9 Score=38.20 Aligned_cols=96 Identities=19% Similarity=0.248 Sum_probs=57.8
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcccc
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFE 244 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~ 244 (424)
.-.|+|+|.|.|. +...|+.+ | .++|| |+. +...++.+.+++ ++.+. .. ++.++.
T Consensus 44 ~~~vLDiGcG~G~----~~~~l~~~--~----~~v~~-vD~--s~~~~~~a~~~~-------~~~~~--~~---d~~~~~ 98 (211)
T 3e23_A 44 GAKILELGCGAGY----QAEAMLAA--G----FDVDA-TDG--SPELAAEASRRL-------GRPVR--TM---LFHQLD 98 (211)
T ss_dssp TCEEEESSCTTSH----HHHHHHHT--T----CEEEE-EES--CHHHHHHHHHHH-------TSCCE--EC---CGGGCC
T ss_pred CCcEEEECCCCCH----HHHHHHHc--C----CeEEE-ECC--CHHHHHHHHHhc-------CCceE--Ee---eeccCC
Confidence 3479999999886 55666665 2 37999 874 666676666654 44432 22 333333
Q ss_pred cCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 245 TNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 245 ~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
.++..=+|-|...|||+.. .....+|+.+ +.|+|.-++++.
T Consensus 99 -~~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 99 -AIDAYDAVWAHACLLHVPR--DELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp -CCSCEEEEEECSCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -CCCcEEEEEecCchhhcCH--HHHHHHHHHHHHhcCCCcEEEEE
Confidence 2332333445556788752 3355666655 668998777664
No 39
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=90.37 E-value=3.9 Score=38.47 Aligned_cols=113 Identities=10% Similarity=0.212 Sum_probs=67.4
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--eE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--FP 231 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--Fe 231 (424)
..|++.+.-.+.-+|+|+|.|.|. +...|+.+.| .++|| |+. +...++.+.+++ +..|++ .+
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~-----~~v~g-vD~--s~~~~~~a~~~~----~~~~~~~~v~ 125 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGS----TMRHAVAEYD-----VNVIG-LTL--SENQYAHDKAMF----DEVDSPRRKE 125 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSH----HHHHHHHHHC-----CEEEE-EEC--CHHHHHHHHHHH----HHSCCSSCEE
T ss_pred HHHHHHcCCCCcCEEEEeeccCcH----HHHHHHHhCC-----CEEEE-EEC--CHHHHHHHHHHH----HhcCCCCceE
Confidence 445666655556789999988774 5555666532 37999 875 676676666554 445665 44
Q ss_pred EEEEecCCCcccccCCCcEEEEeccccccccCCC-----cchHHHHHHHH-HhcCCCeEEEEe
Q 043031 232 FNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRK-----PNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 232 F~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~-----~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
|..- +..++ -..=++++.+ ..+||+.+. ......+|+.+ +-|+|.-.+++.
T Consensus 126 ~~~~---d~~~~-~~~fD~v~~~--~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 182 (302)
T 3hem_A 126 VRIQ---GWEEF-DEPVDRIVSL--GAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLH 182 (302)
T ss_dssp EEEC---CGGGC-CCCCSEEEEE--SCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEE
T ss_pred EEEC---CHHHc-CCCccEEEEc--chHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 4332 34334 1111345544 457888653 13456677655 678997666553
No 40
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=90.22 E-value=4.2 Score=38.47 Aligned_cols=106 Identities=9% Similarity=0.027 Sum_probs=61.1
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--eEEEEEecCCCc
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--FPFNISFLTDIK 241 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--FeF~~v~~~~l~ 241 (424)
+.-+|+|+|.|.|. +...||.+ ..|. .++|| |+. +...++.+.+++ +..|++ .+|..- ++.
T Consensus 118 ~~~~vLDiGcG~G~----~~~~la~~--~~~~-~~v~g-vD~--s~~~~~~a~~~~----~~~~~~~~v~~~~~---d~~ 180 (305)
T 3ocj_A 118 PGCVVASVPCGWMS----ELLALDYS--ACPG-VQLVG-IDY--DPEALDGATRLA----AGHALAGQITLHRQ---DAW 180 (305)
T ss_dssp TTCEEEETTCTTCH----HHHTSCCT--TCTT-CEEEE-EES--CHHHHHHHHHHH----TTSTTGGGEEEEEC---CGG
T ss_pred CCCEEEEecCCCCH----HHHHHHHh--cCCC-CeEEE-EEC--CHHHHHHHHHHH----HhcCCCCceEEEEC---chh
Confidence 34579999999884 34445422 2343 69999 884 666666665543 455665 555443 333
Q ss_pred ccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 242 DFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 242 ~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
++... +..=+|-|...+||+.+ +.....+|+.+ +.|+|.-.+++.
T Consensus 181 ~~~~~-~~fD~v~~~~~~~~~~~-~~~~~~~l~~~~~~LkpgG~l~i~ 226 (305)
T 3ocj_A 181 KLDTR-EGYDLLTSNGLNIYEPD-DARVTELYRRFWQALKPGGALVTS 226 (305)
T ss_dssp GCCCC-SCEEEEECCSSGGGCCC-HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCcc-CCeEEEEECChhhhcCC-HHHHHHHHHHHHHhcCCCeEEEEE
Confidence 33222 33333444455788764 23333466655 678998777763
No 41
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=90.21 E-value=5.2 Score=38.63 Aligned_cols=114 Identities=16% Similarity=0.181 Sum_probs=63.1
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--eE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--FP 231 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--Fe 231 (424)
+.|++.+.-.+.-+|+|+|.|.|. +...|+.+ + | .+++|+ ++. ...++.+.+++ +..|++ .+
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~--~-~-~~~~~~-~D~---~~~~~~a~~~~----~~~~~~~~v~ 236 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGG----FAAAIARR--A-P-HVSATV-LEM---AGTVDTARSYL----KDEGLSDRVD 236 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHH--C-T-TCEEEE-EEC---TTHHHHHHHHH----HHTTCTTTEE
T ss_pred HHHHHhCCCccCcEEEEeCCcCcH----HHHHHHHh--C-C-CCEEEE-ecC---HHHHHHHHHHH----HhcCCCCceE
Confidence 445666554556799999999994 45556655 2 3 378999 863 34455555544 334553 55
Q ss_pred EEEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCe-EEEEeee
Q 043031 232 FNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCV-MVVIEVE 290 (424)
Q Consensus 232 F~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~v-vvl~E~e 290 (424)
|..- ++.+ .+ ++..=+|-+...||++.+ .....+|+.+ +.|+|.- ++++|..
T Consensus 237 ~~~~---d~~~-~~-~~~~D~v~~~~vl~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 237 VVEG---DFFE-PL-PRKADAIILSFVLLNWPD--HDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEC---CTTS-CC-SSCEEEEEEESCGGGSCH--HHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEeC---CCCC-CC-CCCccEEEEcccccCCCH--HHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 5443 2222 11 121323334445787643 2234566665 5679976 4445654
No 42
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=90.02 E-value=12 Score=34.77 Aligned_cols=103 Identities=18% Similarity=0.231 Sum_probs=59.1
Q ss_pred CCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcc
Q 043031 163 AKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKD 242 (424)
Q Consensus 163 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~ 242 (424)
.+.-.|+|+|.|.|. +...|+.+. |+. .++|| |+. +...++.+.+++ +..+...+|..- ++.+
T Consensus 21 ~~~~~vLDiGcG~G~----~~~~l~~~~--~~~-~~v~g-vD~--s~~~~~~a~~~~----~~~~~~v~~~~~---d~~~ 83 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGY----LGLVLMPLL--PEG-SKYTG-IDS--GETLLAEARELF----RLLPYDSEFLEG---DATE 83 (284)
T ss_dssp CSCCEEEEETCTTTH----HHHHHTTTS--CTT-CEEEE-EES--CHHHHHHHHHHH----HSSSSEEEEEES---CTTT
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC--CCC-CEEEE-EEC--CHHHHHHHHHHH----HhcCCceEEEEc---chhh
Confidence 455789999999883 455566653 332 68999 875 566665555443 344554444433 3333
Q ss_pred cccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEE
Q 043031 243 FETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVI 287 (424)
Q Consensus 243 l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~ 287 (424)
+.. ++..=+|-+...+||+.+ .+.+|+.+ +.|+|.-.+++
T Consensus 84 ~~~-~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~ 124 (284)
T 3gu3_A 84 IEL-NDKYDIAICHAFLLHMTT----PETMLQKMIHSVKKGGKIIC 124 (284)
T ss_dssp CCC-SSCEEEEEEESCGGGCSS----HHHHHHHHHHTEEEEEEEEE
T ss_pred cCc-CCCeeEEEECChhhcCCC----HHHHHHHHHHHcCCCCEEEE
Confidence 322 232333333445788753 24555544 67899766554
No 43
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=90.02 E-value=2.6 Score=37.29 Aligned_cols=111 Identities=14% Similarity=0.202 Sum_probs=65.5
Q ss_pred HHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEE
Q 043031 156 VIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNIS 235 (424)
Q Consensus 156 IleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v 235 (424)
+.+.+...+.-+|+|+|.|.|. +...|+.+ + -++|| |+. +...++.+.+++.+ .+ ..+|...
T Consensus 43 l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~--~----~~v~~-vD~--s~~~~~~a~~~~~~----~~-~~~~~~~ 104 (216)
T 3ofk_A 43 LRLSLSSGAVSNGLEIGCAAGA----FTEKLAPH--C----KRLTV-IDV--MPRAIGRACQRTKR----WS-HISWAAT 104 (216)
T ss_dssp HHHHTTTSSEEEEEEECCTTSH----HHHHHGGG--E----EEEEE-EES--CHHHHHHHHHHTTT----CS-SEEEEEC
T ss_pred HHHHcccCCCCcEEEEcCCCCH----HHHHHHHc--C----CEEEE-EEC--CHHHHHHHHHhccc----CC-CeEEEEc
Confidence 3344555667899999999994 55666665 2 37999 885 66667666655432 22 3444433
Q ss_pred ecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEee
Q 043031 236 FLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEV 289 (424)
Q Consensus 236 ~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~ 289 (424)
++.++. .++..=+|-|...|||+.+ +..+..+|+.+ +.|+|.-++++..
T Consensus 105 ---d~~~~~-~~~~fD~v~~~~~l~~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 105 ---DILQFS-TAELFDLIVVAEVLYYLED-MTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp ---CTTTCC-CSCCEEEEEEESCGGGSSS-HHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ---chhhCC-CCCCccEEEEccHHHhCCC-HHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 333332 2232323334456788864 33344556555 6789987766643
No 44
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=89.24 E-value=5.4 Score=34.34 Aligned_cols=108 Identities=18% Similarity=0.242 Sum_probs=62.0
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCC-ceEEE
Q 043031 155 AVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINL-PFPFN 233 (424)
Q Consensus 155 aIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgv-pFeF~ 233 (424)
.+++.+...+.-+|+|+|.|.|. +...|+.+ + .++|| |+. +...++.+.+++.+ .++ ..+|.
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~-~-----~~v~~-vD~--s~~~~~~a~~~~~~----~~~~~~~~~ 85 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGR----NSLYLAAN-G-----YDVDA-WDK--NAMSIANVERIKSI----ENLDNLHTR 85 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSH----HHHHHHHT-T-----CEEEE-EES--CHHHHHHHHHHHHH----HTCTTEEEE
T ss_pred HHHHHhhccCCCeEEEEcCCCCH----HHHHHHHC-C-----CeEEE-EEC--CHHHHHHHHHHHHh----CCCCCcEEE
Confidence 45555554444599999999886 44556665 2 37999 874 66666666555433 344 34443
Q ss_pred EEecCCCcccccCCC--cEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEE
Q 043031 234 ISFLTDIKDFETNEG--EVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVI 287 (424)
Q Consensus 234 ~v~~~~l~~l~~~~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~ 287 (424)
.. ++.++.. ++ +.++.+ ..+||+. +.....+|+.+ +.|+|.-.+++
T Consensus 86 ~~---d~~~~~~-~~~~D~v~~~--~~l~~~~--~~~~~~~l~~~~~~L~~gG~l~~ 134 (199)
T 2xvm_A 86 VV---DLNNLTF-DRQYDFILST--VVLMFLE--AKTIPGLIANMQRCTKPGGYNLI 134 (199)
T ss_dssp EC---CGGGCCC-CCCEEEEEEE--SCGGGSC--GGGHHHHHHHHHHTEEEEEEEEE
T ss_pred Ec---chhhCCC-CCCceEEEEc--chhhhCC--HHHHHHHHHHHHHhcCCCeEEEE
Confidence 33 3333333 33 333333 4577874 23455677665 66799766444
No 45
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=89.02 E-value=5.5 Score=38.09 Aligned_cols=111 Identities=14% Similarity=0.118 Sum_probs=62.7
Q ss_pred HHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--eEEE
Q 043031 156 VIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--FPFN 233 (424)
Q Consensus 156 IleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--FeF~ 233 (424)
|++.+.-.+..+|+|+|.|.| .+...|+.+. | .+++|+ ++. ...++.+.+++. ..|+. .+|.
T Consensus 161 ~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---p-~~~~~~-~D~---~~~~~~a~~~~~----~~~~~~~v~~~ 224 (332)
T 3i53_A 161 IAAKYDWAALGHVVDVGGGSG----GLLSALLTAH---E-DLSGTV-LDL---QGPASAAHRRFL----DTGLSGRAQVV 224 (332)
T ss_dssp GGGSSCCGGGSEEEEETCTTS----HHHHHHHHHC---T-TCEEEE-EEC---HHHHHHHHHHHH----HTTCTTTEEEE
T ss_pred HHHhCCCCCCCEEEEeCCChh----HHHHHHHHHC---C-CCeEEE-ecC---HHHHHHHHHhhh----hcCcCcCeEEe
Confidence 334443344679999999999 5566676653 3 378999 763 455665555543 34442 5565
Q ss_pred EEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEE-Eee
Q 043031 234 ISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVV-IEV 289 (424)
Q Consensus 234 ~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl-~E~ 289 (424)
.-... +++.. .-+++..+ ..||++.+ .....+|+.+ +.|+|.-.++ +|.
T Consensus 225 ~~d~~--~~~p~-~~D~v~~~--~vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 225 VGSFF--DPLPA-GAGGYVLS--AVLHDWDD--LSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp ECCTT--SCCCC-SCSEEEEE--SCGGGSCH--HHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cCCCC--CCCCC-CCcEEEEe--hhhccCCH--HHHHHHHHHHHHhcCCCCEEEEEee
Confidence 54221 12222 22344433 45788753 2245677666 6679975544 444
No 46
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=88.68 E-value=0.79 Score=44.18 Aligned_cols=142 Identities=10% Similarity=0.066 Sum_probs=76.8
Q ss_pred HHHhcCChhhhHHHHHHHHHHhhh----cCC-CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHH
Q 043031 137 ACYQKVPFYQVTVFAGIQAVIENV----SSA-KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQK 211 (424)
Q Consensus 137 ~~~e~~P~~kfa~~tANqaIleA~----~g~-~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~ 211 (424)
.+.+..|-+. ...-+|.+.+.-+ .++ .-=+|+|+|.|-|.. ..+..++.+. -|. -|||+ |+. +...
T Consensus 47 ~~~~~~P~~~-~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~--~~~~~la~~~--~P~-arVv~-VD~--sp~m 117 (277)
T 3giw_A 47 AMSREWPALP-VHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTS--PNLHEIAQSV--APE-SRVVY-VDN--DPIV 117 (277)
T ss_dssp HHHHHCTTHH-HHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCS--SCHHHHHHHH--CTT-CEEEE-EEC--CHHH
T ss_pred HHHHhCCCHH-HHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcc--cHHHHHHHHH--CCC-CEEEE-EeC--ChHH
Confidence 4455667763 3345788877643 223 223799999987542 1234444432 233 69999 874 6777
Q ss_pred HHHHHHHHHHHHHhCCCceEEEEEecCCCcc-c-------ccCCCcEEEEeccccccccCCCcchHHHHHHHHHhcCCCe
Q 043031 212 FEEIENRLANFAETINLPFPFNISFLTDIKD-F-------ETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCV 283 (424)
Q Consensus 212 l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~-l-------~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~v 283 (424)
|+....+|.+. -.-..+|......++.. + .+..++.++|-+...||||.+...+...+=+..+.|+|.-
T Consensus 118 La~Ar~~l~~~---~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG 194 (277)
T 3giw_A 118 LTLSQGLLAST---PEGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGS 194 (277)
T ss_dssp HHTTHHHHCCC---SSSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTC
T ss_pred HHHHHHHhccC---CCCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCc
Confidence 77776666421 11134444443222210 0 1233554555566668999764333333335557789975
Q ss_pred EE-EEeee
Q 043031 284 MV-VIEVE 290 (424)
Q Consensus 284 vv-l~E~e 290 (424)
.+ +++--
T Consensus 195 ~Lvls~~~ 202 (277)
T 3giw_A 195 YLAMSIGT 202 (277)
T ss_dssp EEEEEEEC
T ss_pred EEEEEecc
Confidence 44 44443
No 47
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=88.51 E-value=5.1 Score=37.94 Aligned_cols=110 Identities=9% Similarity=0.087 Sum_probs=62.3
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHh----CCCceEEEEEecCC
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAET----INLPFPFNISFLTD 239 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~----lgvpFeF~~v~~~~ 239 (424)
+.-+|+|+|.|.|.- ...|+.++ . -++|| |+. +...++.+.++....... ..-..+|... +
T Consensus 34 ~~~~VLDlGcG~G~~----~~~l~~~~---~--~~v~g-vD~--s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~---D 98 (313)
T 3bgv_A 34 RDITVLDLGCGKGGD----LLKWKKGR---I--NKLVC-TDI--ADVSVKQCQQRYEDMKNRRDSEYIFSAEFITA---D 98 (313)
T ss_dssp -CCEEEEETCTTTTT----HHHHHHTT---C--SEEEE-EES--CHHHHHHHHHHHHHHHSSSCC-CCCEEEEEEC---C
T ss_pred CCCEEEEECCCCcHH----HHHHHhcC---C--CEEEE-EeC--CHHHHHHHHHHHHHhhhcccccccceEEEEEe---c
Confidence 456899999998873 34444432 2 48999 874 777787777776543211 1113344333 3
Q ss_pred Ccccc----c--CCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 240 IKDFE----T--NEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 240 l~~l~----~--~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
+.++. + .++..=+|-|.+.||++..+......+|+.+ +.|+|.-++++.
T Consensus 99 ~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (313)
T 3bgv_A 99 SSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGT 154 (313)
T ss_dssp TTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 33322 2 2222333344557888744334455677766 668998666654
No 48
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=88.48 E-value=2.9 Score=37.44 Aligned_cols=104 Identities=16% Similarity=0.243 Sum_probs=60.8
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCccc
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDF 243 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l 243 (424)
+.-+|+|+|.|.|.- ...|+.+ | .++|| |+. +...++.+.+++. ..|+..+|... ++.++
T Consensus 37 ~~~~vLdiG~G~G~~----~~~l~~~--~----~~~~~-~D~--s~~~~~~a~~~~~----~~~~~~~~~~~---d~~~~ 96 (246)
T 1y8c_A 37 VFDDYLDLACGTGNL----TENLCPK--F----KNTWA-VDL--SQEMLSEAENKFR----SQGLKPRLACQ---DISNL 96 (246)
T ss_dssp CTTEEEEETCTTSTT----HHHHGGG--S----SEEEE-ECS--CHHHHHHHHHHHH----HTTCCCEEECC---CGGGC
T ss_pred CCCeEEEeCCCCCHH----HHHHHHC--C----CcEEE-EEC--CHHHHHHHHHHHh----hcCCCeEEEec---ccccC
Confidence 456899999999873 4455555 2 37999 874 6677776666653 33444444332 33333
Q ss_pred ccCCCcEEEEeccc-cccccCCCcchHHHHHHHH-HhcCCCeEEEEee
Q 043031 244 ETNEGEVVAVYSPV-HLSHMIRKPNCLETFLTEL-RKINPCVMVVIEV 289 (424)
Q Consensus 244 ~~~~~E~laVN~~~-~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~ 289 (424)
... +..=+|-|.. .|||+.+. .....+|+.+ +.|+|.-+++++.
T Consensus 97 ~~~-~~fD~v~~~~~~l~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 97 NIN-RKFDLITCCLDSTNYIIDS-DDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp CCS-CCEEEEEECTTGGGGCCSH-HHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred Ccc-CCceEEEEcCccccccCCH-HHHHHHHHHHHHhcCCCcEEEEEe
Confidence 222 3222222344 68888542 3345666665 5679987777654
No 49
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=88.26 E-value=0.97 Score=41.09 Aligned_cols=93 Identities=15% Similarity=0.213 Sum_probs=51.8
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcc-c
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKD-F 243 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~-l 243 (424)
.-+|+|+|.|.|. +...|+.+ | .++|| |+. +...++.+.++ ++|.. .+..+ +
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~----~~v~g-vD~--s~~~~~~a~~~-----------~~~~~---~d~~~~~ 94 (240)
T 3dli_A 42 CRRVLDIGCGRGE----FLELCKEE--G----IESIG-VDI--NEDMIKFCEGK-----------FNVVK---SDAIEYL 94 (240)
T ss_dssp CSCEEEETCTTTH----HHHHHHHH--T----CCEEE-ECS--CHHHHHHHHTT-----------SEEEC---SCHHHHH
T ss_pred CCeEEEEeCCCCH----HHHHHHhC--C----CcEEE-EEC--CHHHHHHHHhh-----------cceee---ccHHHHh
Confidence 3589999998875 45566665 2 25899 874 55555544333 23322 22222 1
Q ss_pred -ccCCC--cEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 244 -ETNEG--EVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 244 -~~~~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
...++ +.|+. ...|||+.+ .....+|+.+ +.|+|.-.+++.
T Consensus 95 ~~~~~~~fD~i~~--~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~ 139 (240)
T 3dli_A 95 KSLPDKYLDGVMI--SHFVEHLDP--ERLFELLSLCYSKMKYSSYIVIE 139 (240)
T ss_dssp HTSCTTCBSEEEE--ESCGGGSCG--GGHHHHHHHHHHHBCTTCCEEEE
T ss_pred hhcCCCCeeEEEE--CCchhhCCc--HHHHHHHHHHHHHcCCCcEEEEE
Confidence 22223 34443 345788853 2355667655 678997555553
No 50
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=88.12 E-value=4.1 Score=36.96 Aligned_cols=110 Identities=14% Similarity=0.131 Sum_probs=63.4
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--eE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--FP 231 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--Fe 231 (424)
..|++.+.-.+.-+|+|+|.|.|. +...|+.+.+ .++|| |+. +...++.+.+++ +..|++ .+
T Consensus 26 ~~l~~~~~~~~~~~VLDiGcG~G~----~~~~la~~~~-----~~v~g-vD~--s~~~l~~a~~~~----~~~~~~~~v~ 89 (256)
T 1nkv_A 26 ATLGRVLRMKPGTRILDLGSGSGE----MLCTWARDHG-----ITGTG-IDM--SSLFTAQAKRRA----EELGVSERVH 89 (256)
T ss_dssp HHHHHHTCCCTTCEEEEETCTTCH----HHHHHHHHTC-----CEEEE-EES--CHHHHHHHHHHH----HHTTCTTTEE
T ss_pred HHHHHhcCCCCCCEEEEECCCCCH----HHHHHHHhcC-----CeEEE-EeC--CHHHHHHHHHHH----HhcCCCcceE
Confidence 445555544445589999999886 3445555532 26899 874 666666665543 445654 55
Q ss_pred EEEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEE
Q 043031 232 FNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVI 287 (424)
Q Consensus 232 F~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~ 287 (424)
|... ++.++.. ++..=+|-|...+||+.+ ...+|+.+ +-|+|.-.+++
T Consensus 90 ~~~~---d~~~~~~-~~~fD~V~~~~~~~~~~~----~~~~l~~~~r~LkpgG~l~~ 138 (256)
T 1nkv_A 90 FIHN---DAAGYVA-NEKCDVAACVGATWIAGG----FAGAEELLAQSLKPGGIMLI 138 (256)
T ss_dssp EEES---CCTTCCC-SSCEEEEEEESCGGGTSS----SHHHHHHHTTSEEEEEEEEE
T ss_pred EEEC---ChHhCCc-CCCCCEEEECCChHhcCC----HHHHHHHHHHHcCCCeEEEE
Confidence 5543 3333322 333323334555788753 34566655 56799765554
No 51
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=87.68 E-value=19 Score=33.91 Aligned_cols=110 Identities=12% Similarity=0.192 Sum_probs=63.0
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--eE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--FP 231 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--Fe 231 (424)
+.|++.+.-.+.-+|+|+|.|.|. +...|+.+.| .++|| |+. +...++.+.+++ +..|++ .+
T Consensus 80 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~-----~~v~g-vD~--s~~~~~~a~~~~----~~~~~~~~v~ 143 (318)
T 2fk8_A 80 DLNLDKLDLKPGMTLLDIGCGWGT----TMRRAVERFD-----VNVIG-LTL--SKNQHARCEQVL----ASIDTNRSRQ 143 (318)
T ss_dssp HHHHTTSCCCTTCEEEEESCTTSH----HHHHHHHHHC-----CEEEE-EES--CHHHHHHHHHHH----HTSCCSSCEE
T ss_pred HHHHHhcCCCCcCEEEEEcccchH----HHHHHHHHCC-----CEEEE-EEC--CHHHHHHHHHHH----HhcCCCCceE
Confidence 456666654555689999998874 4455665532 27999 874 666666655543 344654 34
Q ss_pred EEEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEE
Q 043031 232 FNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVI 287 (424)
Q Consensus 232 F~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~ 287 (424)
|... +..++. ..=++++.+ ..|||+.. .....+|+.+ +.|+|.-.+++
T Consensus 144 ~~~~---d~~~~~-~~fD~v~~~--~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 144 VLLQ---GWEDFA-EPVDRIVSI--EAFEHFGH--ENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp EEES---CGGGCC-CCCSEEEEE--SCGGGTCG--GGHHHHHHHHHHHSCTTCEEEE
T ss_pred EEEC---ChHHCC-CCcCEEEEe--ChHHhcCH--HHHHHHHHHHHHhcCCCcEEEE
Confidence 4322 333332 122344444 34788753 2345666655 67899755554
No 52
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=87.53 E-value=5.4 Score=37.21 Aligned_cols=116 Identities=11% Similarity=0.142 Sum_probs=66.3
Q ss_pred HHHHhhh----cCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc
Q 043031 154 QAVIENV----SSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP 229 (424)
Q Consensus 154 qaIleA~----~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp 229 (424)
..|++.+ .-.+.-+|+|+|.|.|.. ...|+.+.+ .++|| |+. +...++.+.+++. ..|++
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~----~~~l~~~~~-----~~v~g-vD~--s~~~~~~a~~~~~----~~~~~ 131 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGA----ARFLVRKFG-----VSIDC-LNI--APVQNKRNEEYNN----QAGLA 131 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHH----HHHHHHHHC-----CEEEE-EES--CHHHHHHHHHHHH----HHTCT
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHH----HHHHHHHhC-----CEEEE-EeC--CHHHHHHHHHHHH----hcCCC
Confidence 3445555 334456899999998864 334444432 27999 874 6666766665543 33443
Q ss_pred --eEEEEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEE-EeeeCC
Q 043031 230 --FPFNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVV-IEVESN 292 (424)
Q Consensus 230 --FeF~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl-~E~ea~ 292 (424)
.+|... +..++...++..=+|-+...|||+.+ ...+|+.+ +.|+|.-.++ ++....
T Consensus 132 ~~~~~~~~---d~~~~~~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~~~~~ 191 (297)
T 2o57_A 132 DNITVKYG---SFLEIPCEDNSYDFIWSQDAFLHSPD----KLKVFQECARVLKPRGVMAITDPMKE 191 (297)
T ss_dssp TTEEEEEC---CTTSCSSCTTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred cceEEEEc---CcccCCCCCCCEeEEEecchhhhcCC----HHHHHHHHHHHcCCCeEEEEEEeccC
Confidence 444433 44444444444444455566888854 45566555 6689965444 454433
No 53
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=87.31 E-value=0.54 Score=46.91 Aligned_cols=110 Identities=13% Similarity=0.177 Sum_probs=62.8
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEE
Q 043031 155 AVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNI 234 (424)
Q Consensus 155 aIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~ 234 (424)
.|++.+.-.+.-.|+|+|.|.|. ++..|+.+ | .++|| |+. +...++ .|+..|++..-..
T Consensus 98 ~l~~~~~~~~~~~VLDiGcG~G~----~~~~l~~~--g----~~v~g-vD~--s~~~~~--------~a~~~~~~~~~~~ 156 (416)
T 4e2x_A 98 DFLATELTGPDPFIVEIGCNDGI----MLRTIQEA--G----VRHLG-FEP--SSGVAA--------KAREKGIRVRTDF 156 (416)
T ss_dssp HHHHTTTCSSSCEEEEETCTTTT----THHHHHHT--T----CEEEE-ECC--CHHHHH--------HHHTTTCCEECSC
T ss_pred HHHHHhCCCCCCEEEEecCCCCH----HHHHHHHc--C----CcEEE-ECC--CHHHHH--------HHHHcCCCcceee
Confidence 45555544456689999999998 56666665 2 37999 985 554443 4455566543211
Q ss_pred EecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEee
Q 043031 235 SFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEV 289 (424)
Q Consensus 235 v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~ 289 (424)
+...+..++...++..=+|-+...|||+.+ ...+|+.+ +-|+|.-+++++.
T Consensus 157 ~~~~~~~~l~~~~~~fD~I~~~~vl~h~~d----~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 157 FEKATADDVRRTEGPANVIYAANTLCHIPY----VQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp CSHHHHHHHHHHHCCEEEEEEESCGGGCTT----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred echhhHhhcccCCCCEEEEEECChHHhcCC----HHHHHHHHHHHcCCCeEEEEEe
Confidence 111111112222333333444456889853 45667666 6679987777653
No 54
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=86.89 E-value=9.6 Score=34.42 Aligned_cols=102 Identities=13% Similarity=0.151 Sum_probs=58.4
Q ss_pred CCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcc
Q 043031 163 AKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKD 242 (424)
Q Consensus 163 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~ 242 (424)
.+.-+|+|+|.|.|.- ...|+.+ + .++|| |+. +...++.+.+++ +...-.++|... +..+
T Consensus 38 ~~~~~vLDiG~G~G~~----~~~l~~~--~----~~v~~-vD~--s~~~~~~a~~~~----~~~~~~~~~~~~---d~~~ 97 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRI----ALPLIAR--G----YRYIA-LDA--DAAMLEVFRQKI----AGVDRKVQVVQA---DARA 97 (263)
T ss_dssp SSCCEEEEETCTTSTT----HHHHHTT--T----CEEEE-EES--CHHHHHHHHHHT----TTSCTTEEEEES---CTTS
T ss_pred CCCCEEEEeCCcCCHH----HHHHHHC--C----CEEEE-EEC--CHHHHHHHHHHh----hccCCceEEEEc---cccc
Confidence 3446899999999863 3345544 2 37999 874 666666665554 222233444433 3334
Q ss_pred cccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 243 FETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 243 l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
+...++..=+|-+...+||+.+ ...+|+.+ +.|+|.-.+++.
T Consensus 98 ~~~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 98 IPLPDESVHGVIVVHLWHLVPD----WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CCSCTTCEEEEEEESCGGGCTT----HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCCCeeEEEECCchhhcCC----HHHHHHHHHHHCCCCcEEEEE
Confidence 4443443323334456788753 34566554 678997666654
No 55
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=86.81 E-value=7 Score=36.21 Aligned_cols=112 Identities=8% Similarity=0.155 Sum_probs=62.6
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFN 233 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~ 233 (424)
..|++.+.-.+.-+|+|+|.|.|. +...|+.+.| .++|| |+. +...++.+.+++ +..|++-...
T Consensus 54 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~-----~~v~g-vd~--s~~~~~~a~~~~----~~~~~~~~~~ 117 (287)
T 1kpg_A 54 DLALGKLGLQPGMTLLDVGCGWGA----TMMRAVEKYD-----VNVVG-LTL--SKNQANHVQQLV----ANSENLRSKR 117 (287)
T ss_dssp HHHHTTTTCCTTCEEEEETCTTSH----HHHHHHHHHC-----CEEEE-EES--CHHHHHHHHHHH----HTCCCCSCEE
T ss_pred HHHHHHcCCCCcCEEEEECCcccH----HHHHHHHHcC-----CEEEE-EEC--CHHHHHHHHHHH----HhcCCCCCeE
Confidence 345565554555689999988775 5556665432 27999 874 666666665554 3445432222
Q ss_pred EEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEE
Q 043031 234 ISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVI 287 (424)
Q Consensus 234 ~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~ 287 (424)
.+. .++.++. ..=+.|+.+ ..|||+.. .....+|+.+ +.|+|.-.+++
T Consensus 118 ~~~-~d~~~~~-~~fD~v~~~--~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 118 VLL-AGWEQFD-EPVDRIVSI--GAFEHFGH--ERYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp EEE-SCGGGCC-CCCSEEEEE--SCGGGTCT--TTHHHHHHHHHHHSCTTCEEEE
T ss_pred EEE-CChhhCC-CCeeEEEEe--CchhhcCh--HHHHHHHHHHHHhcCCCCEEEE
Confidence 222 2333333 222344433 35788853 2245566655 67899755554
No 56
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=86.73 E-value=5.4 Score=37.41 Aligned_cols=106 Identities=14% Similarity=0.148 Sum_probs=62.2
Q ss_pred CCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcc
Q 043031 163 AKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKD 242 (424)
Q Consensus 163 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~ 242 (424)
.+.-+|+|+|.|.|. +...|+.+- +| ..++|| |+. +...++.+.+++.+. ....-..+|... ++.+
T Consensus 35 ~~~~~vLDiGcG~G~----~~~~la~~~--~~-~~~v~g-vD~--s~~~~~~a~~~~~~~-~~~~~~v~~~~~---d~~~ 100 (299)
T 3g5t_A 35 GERKLLVDVGCGPGT----ATLQMAQEL--KP-FEQIIG-SDL--SATMIKTAEVIKEGS-PDTYKNVSFKIS---SSDD 100 (299)
T ss_dssp SCCSEEEEETCTTTH----HHHHHHHHS--SC-CSEEEE-EES--CHHHHHHHHHHHHHC-C-CCTTEEEEEC---CTTC
T ss_pred CCCCEEEEECCCCCH----HHHHHHHhC--CC-CCEEEE-EeC--CHHHHHHHHHHHHhc-cCCCCceEEEEc---CHHh
Confidence 356789999999883 555566532 12 258999 885 677777666665432 011234555544 3333
Q ss_pred cccCC------CcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEE
Q 043031 243 FETNE------GEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVI 287 (424)
Q Consensus 243 l~~~~------~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~ 287 (424)
+.... +..=+|-|...+||+ + ...+|+.+ +.|+|.-.+++
T Consensus 101 ~~~~~~~~~~~~~fD~V~~~~~l~~~-~----~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 101 FKFLGADSVDKQKIDMITAVECAHWF-D----FEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CGGGCTTTTTSSCEEEEEEESCGGGS-C----HHHHHHHHHHHEEEEEEEEE
T ss_pred CCccccccccCCCeeEEeHhhHHHHh-C----HHHHHHHHHHhcCCCcEEEE
Confidence 33222 444455555678998 3 44566555 66899766655
No 57
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=86.39 E-value=5.4 Score=39.58 Aligned_cols=123 Identities=15% Similarity=0.125 Sum_probs=69.1
Q ss_pred HHHHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceE
Q 043031 152 GIQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFP 231 (424)
Q Consensus 152 ANqaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFe 231 (424)
....+++.+.....-+|+|+|.|.|. +...++.+ + |. .++|| |+. +...++.+.+++...--.-.+.++
T Consensus 210 ~~~~ll~~l~~~~~~~VLDlGcG~G~----~s~~la~~--~-p~-~~V~g-vD~--s~~al~~Ar~n~~~ngl~~~~~v~ 278 (375)
T 4dcm_A 210 GARFFMQHLPENLEGEIVDLGCGNGV----IGLTLLDK--N-PQ-AKVVF-VDE--SPMAVASSRLNVETNMPEALDRCE 278 (375)
T ss_dssp HHHHHHHTCCCSCCSEEEEETCTTCH----HHHHHHHH--C-TT-CEEEE-EES--CHHHHHHHHHHHHHHCGGGGGGEE
T ss_pred HHHHHHHhCcccCCCeEEEEeCcchH----HHHHHHHH--C-CC-CEEEE-EEC--cHHHHHHHHHHHHHcCCCcCceEE
Confidence 44567888876655789999999994 55556665 2 32 68999 884 677777666665432111112344
Q ss_pred EEEEecCCCcc-cccCCCcEEEEeccccccccCCC-cchHHHHHHHH-HhcCCCeEEEEeee
Q 043031 232 FNISFLTDIKD-FETNEGEVVAVYSPVHLSHMIRK-PNCLETFLTEL-RKINPCVMVVIEVE 290 (424)
Q Consensus 232 F~~v~~~~l~~-l~~~~~E~laVN~~~~Lh~l~~~-~~~~~~~L~~i-r~L~P~vvvl~E~e 290 (424)
|..- +..+ +.-..=+.|+.|-+| |+.... ......+++.+ +.|+|.-.+++..+
T Consensus 279 ~~~~---D~~~~~~~~~fD~Ii~nppf--h~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 279 FMIN---NALSGVEPFRFNAVLCNPPF--HQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp EEEC---STTTTCCTTCEEEEEECCCC---------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEec---hhhccCCCCCeeEEEECCCc--ccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 4433 2222 221122577778775 432211 12234566666 55899877777543
No 58
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=86.33 E-value=11 Score=33.26 Aligned_cols=100 Identities=14% Similarity=0.194 Sum_probs=58.0
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcccc
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFE 244 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~ 244 (424)
.-+|+|+|.|.|. +...|+.+ +| ++|| |+. +...++.+.+++. ..+...+|... ++.++.
T Consensus 39 ~~~vLDlG~G~G~----~~~~l~~~--~~----~v~~-vD~--s~~~~~~a~~~~~----~~~~~~~~~~~---d~~~~~ 98 (227)
T 1ve3_A 39 RGKVLDLACGVGG----FSFLLEDY--GF----EVVG-VDI--SEDMIRKAREYAK----SRESNVEFIVG---DARKLS 98 (227)
T ss_dssp CCEEEEETCTTSH----HHHHHHHT--TC----EEEE-EES--CHHHHHHHHHHHH----HTTCCCEEEEC---CTTSCC
T ss_pred CCeEEEEeccCCH----HHHHHHHc--CC----EEEE-EEC--CHHHHHHHHHHHH----hcCCCceEEEC---chhcCC
Confidence 4589999999883 44566665 33 7999 874 6666666655543 33334444333 333333
Q ss_pred cCCC--cEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 245 TNEG--EVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 245 ~~~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
..++ +.++.|..+.+++.. ....+|+.+ +.|+|.-.+++.
T Consensus 99 ~~~~~~D~v~~~~~~~~~~~~----~~~~~l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 99 FEDKTFDYVIFIDSIVHFEPL----ELNQVFKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp SCTTCEEEEEEESCGGGCCHH----HHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCcEEEEEEcCchHhCCHH----HHHHHHHHHHHHcCCCcEEEEE
Confidence 3322 466666665555442 234566555 668997655543
No 59
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=86.09 E-value=6.7 Score=35.43 Aligned_cols=112 Identities=13% Similarity=0.247 Sum_probs=62.2
Q ss_pred HHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEE
Q 043031 156 VIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNIS 235 (424)
Q Consensus 156 IleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v 235 (424)
+++.....+.-+|+|+|.|.|. +...|+.+ | .++|| |+. +...++.+.+++. ..|+..+|...
T Consensus 33 ~~~~~~~~~~~~vLDlGcG~G~----~~~~l~~~--~----~~v~g-vD~--s~~~l~~a~~~~~----~~~~~v~~~~~ 95 (252)
T 1wzn_A 33 IFKEDAKREVRRVLDLACGTGI----PTLELAER--G----YEVVG-LDL--HEEMLRVARRKAK----ERNLKIEFLQG 95 (252)
T ss_dssp HHHHTCSSCCCEEEEETCTTCH----HHHHHHHT--T----CEEEE-EES--CHHHHHHHHHHHH----HTTCCCEEEES
T ss_pred HHHHhcccCCCEEEEeCCCCCH----HHHHHHHC--C----CeEEE-EEC--CHHHHHHHHHHHH----hcCCceEEEEC
Confidence 3343333445689999999984 44556655 2 37999 874 6777776666543 34555555433
Q ss_pred ecCCCcccccCCC-cEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEeee
Q 043031 236 FLTDIKDFETNEG-EVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEVE 290 (424)
Q Consensus 236 ~~~~l~~l~~~~~-E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~e 290 (424)
++.++..... ++++.++. .++++ . +.....+|+.+ +.|+|.-+++++..
T Consensus 96 ---d~~~~~~~~~fD~v~~~~~-~~~~~-~-~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 96 ---DVLEIAFKNEFDAVTMFFS-TIMYF-D-EEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp ---CGGGCCCCSCEEEEEECSS-GGGGS-C-HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---ChhhcccCCCccEEEEcCC-chhcC-C-HHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 3333322211 23322211 23333 2 23455666665 66899888887643
No 60
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=86.00 E-value=6 Score=34.28 Aligned_cols=106 Identities=13% Similarity=0.163 Sum_probs=62.3
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCC-ceEEEEEecCCCcc-
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINL-PFPFNISFLTDIKD- 242 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgv-pFeF~~v~~~~l~~- 242 (424)
.-+|+|+|.|.|.- ...++.+ + .-++|| |+. +...++.+.+++. ..|+ ..+|.. .+..+
T Consensus 45 ~~~vLDlgcG~G~~----~~~~~~~--~---~~~v~~-vD~--~~~~~~~a~~~~~----~~~~~~v~~~~---~d~~~~ 105 (189)
T 3p9n_A 45 GLAVLDLYAGSGAL----GLEALSR--G---AASVLF-VES--DQRSAAVIARNIE----ALGLSGATLRR---GAVAAV 105 (189)
T ss_dssp TCEEEEETCTTCHH----HHHHHHT--T---CSEEEE-EEC--CHHHHHHHHHHHH----HHTCSCEEEEE---SCHHHH
T ss_pred CCEEEEeCCCcCHH----HHHHHHC--C---CCeEEE-EEC--CHHHHHHHHHHHH----HcCCCceEEEE---ccHHHH
Confidence 34799999998842 2223444 1 147999 884 6667766666543 3354 233332 23322
Q ss_pred ---cccCCCcEEEEeccccccccCCCcchHHHHHHHHHh---cCCCeEEEEeeeCCCC
Q 043031 243 ---FETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRK---INPCVMVVIEVESNDN 294 (424)
Q Consensus 243 ---l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~---L~P~vvvl~E~ea~~n 294 (424)
+.-..=+.++.|.++ |+. ....+.++..+++ |+|.-+++++.+....
T Consensus 106 ~~~~~~~~fD~i~~~~p~--~~~---~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 106 VAAGTTSPVDLVLADPPY--NVD---SADVDAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp HHHCCSSCCSEEEECCCT--TSC---HHHHHHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred HhhccCCCccEEEECCCC--Ccc---hhhHHHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 111222577777764 332 1335677777765 9999999998876554
No 61
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=85.12 E-value=10 Score=36.29 Aligned_cols=106 Identities=10% Similarity=0.120 Sum_probs=63.8
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCC-------ceEEEEEec
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINL-------PFPFNISFL 237 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgv-------pFeF~~v~~ 237 (424)
.-+|+|+|.|.|.- +..++.+ ++ -++|| |+. +...++.+.++..+. ++ .++|.....
T Consensus 49 ~~~VLDlGCG~G~~----l~~~~~~-~~----~~v~G-iD~--S~~~l~~A~~~~~~~----~~~~~~~~~~~~f~~~d~ 112 (302)
T 2vdw_A 49 KRKVLAIDFGNGAD----LEKYFYG-EI----ALLVA-TDP--DADAIARGNERYNKL----NSGIKTKYYKFDYIQETI 112 (302)
T ss_dssp CCEEEETTCTTTTT----HHHHHHT-TC----SEEEE-EES--CHHHHHHHHHHHHHH----CC----CCCEEEEEECCT
T ss_pred CCeEEEEecCCcHh----HHHHHhc-CC----CeEEE-EEC--CHHHHHHHHHHHHhc----cccccccccccchhhhhc
Confidence 45899999999852 2223333 11 36999 985 888888887765432 32 245554322
Q ss_pred -CCC--cccc--cCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEE
Q 043031 238 -TDI--KDFE--TNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVI 287 (424)
Q Consensus 238 -~~l--~~l~--~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~ 287 (424)
.+. .+|. ..++..=+|.|++.||++.+... .+.+|+.+ +.|+|.-++++
T Consensus 113 ~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~-~~~~l~~~~r~LkpGG~~i~ 167 (302)
T 2vdw_A 113 RSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRH-YATVMNNLSELTASGGKVLI 167 (302)
T ss_dssp TSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTTT-HHHHHHHHHHHEEEEEEEEE
T ss_pred ccchhhhhhhccccCCCeeEEEECchHHHhCCHHH-HHHHHHHHHHHcCCCCEEEE
Confidence 111 1121 22344446678888998765443 46777766 67899766665
No 62
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=84.59 E-value=4.2 Score=36.23 Aligned_cols=95 Identities=15% Similarity=0.169 Sum_probs=54.9
Q ss_pred eEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCccccc
Q 043031 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFET 245 (424)
Q Consensus 166 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~~ 245 (424)
-+|+|+|.|.|. +...|+.+ ++ ++|| |+. +...++.+.+++.. ..+|... ++.++ .
T Consensus 44 ~~vLDiGcG~G~----~~~~l~~~--~~----~v~g-vD~--s~~~~~~a~~~~~~-------~v~~~~~---d~~~~-~ 99 (250)
T 2p7i_A 44 GNLLELGSFKGD----FTSRLQEH--FN----DITC-VEA--SEEAISHAQGRLKD-------GITYIHS---RFEDA-Q 99 (250)
T ss_dssp SCEEEESCTTSH----HHHHHTTT--CS----CEEE-EES--CHHHHHHHHHHSCS-------CEEEEES---CGGGC-C
T ss_pred CcEEEECCCCCH----HHHHHHHh--CC----cEEE-EeC--CHHHHHHHHHhhhC-------CeEEEEc---cHHHc-C
Confidence 469999999884 45566654 33 5899 875 66666555544322 3334332 33333 2
Q ss_pred CCCcEEEEeccccccccCCCcchHHHHHHHHH--hcCCCeEEEEe
Q 043031 246 NEGEVVAVYSPVHLSHMIRKPNCLETFLTELR--KINPCVMVVIE 288 (424)
Q Consensus 246 ~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir--~L~P~vvvl~E 288 (424)
.++..=+|-|...|||+.+ .+.+|+.++ -|+|.-.+++.
T Consensus 100 ~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~~LkpgG~l~i~ 140 (250)
T 2p7i_A 100 LPRRYDNIVLTHVLEHIDD----PVALLKRINDDWLAEGGRLFLV 140 (250)
T ss_dssp CSSCEEEEEEESCGGGCSS----HHHHHHHHHHTTEEEEEEEEEE
T ss_pred cCCcccEEEEhhHHHhhcC----HHHHHHHHHHHhcCCCCEEEEE
Confidence 2332333334456889853 356777765 67997655553
No 63
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=84.39 E-value=5.3 Score=34.98 Aligned_cols=109 Identities=20% Similarity=0.265 Sum_probs=60.9
Q ss_pred HHHHHhhhc-CCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCC-Cce
Q 043031 153 IQAVIENVS-SAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETIN-LPF 230 (424)
Q Consensus 153 NqaIleA~~-g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lg-vpF 230 (424)
...+++.+. -.+.-+|+|+|.|.|. +...|+.+ | .++|| |+. +...++.+. ..| -..
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~----~~~~l~~~--~----~~v~~-~D~--s~~~~~~a~--------~~~~~~~ 92 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGY----WTRHLSGL--A----DRVTA-LDG--SAEMIAEAG--------RHGLDNV 92 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSH----HHHHHHHH--S----SEEEE-EES--CHHHHHHHG--------GGCCTTE
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCH----HHHHHHhc--C----CeEEE-EeC--CHHHHHHHH--------hcCCCCe
Confidence 345666664 2333499999999885 55556655 2 37999 874 554444433 344 234
Q ss_pred EEEEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 231 PFNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 231 eF~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
+|... ++.++ ..++..=+|-|...|||+.+ ..+..+|+.+ +.|+|.-.+++.
T Consensus 93 ~~~~~---d~~~~-~~~~~~D~v~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~~~ 145 (218)
T 3ou2_A 93 EFRQQ---DLFDW-TPDRQWDAVFFAHWLAHVPD--DRFEAFWESVRSAVAPGGVVEFV 145 (218)
T ss_dssp EEEEC---CTTSC-CCSSCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEec---ccccC-CCCCceeEEEEechhhcCCH--HHHHHHHHHHHHHcCCCeEEEEE
Confidence 44333 33333 23333333444456888853 2245666655 678996555443
No 64
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=84.20 E-value=3.9 Score=39.63 Aligned_cols=110 Identities=11% Similarity=0.099 Sum_probs=60.0
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCC--ceE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINL--PFP 231 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgv--pFe 231 (424)
..|++.+.-.+.-+|+|+|.|.|. +...|+.+. | .+++|+ ++. ...+. .+.++..++ ..+
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---p-~~~~~~-~D~---~~~~~------~~~~~~~~~~~~v~ 235 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGG----FLLTVLREH---P-GLQGVL-LDR---AEVVA------RHRLDAPDVAGRWK 235 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSH----HHHHHHHHC---T-TEEEEE-EEC---HHHHT------TCCCCCGGGTTSEE
T ss_pred HHHHHhCCccCCceEEEECCccCH----HHHHHHHHC---C-CCEEEE-ecC---HHHhh------cccccccCCCCCeE
Confidence 356776655567899999999985 555666552 3 378999 864 12221 111122233 245
Q ss_pred EEEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEE-EEee
Q 043031 232 FNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMV-VIEV 289 (424)
Q Consensus 232 F~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvv-l~E~ 289 (424)
|..-.. .+++. .-++++.+ ..|||+.+ .....+|+.+ +.|+|.-.+ ++|.
T Consensus 236 ~~~~d~--~~~~p--~~D~v~~~--~vlh~~~d--~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 236 VVEGDF--LREVP--HADVHVLK--RILHNWGD--EDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp EEECCT--TTCCC--CCSEEEEE--SCGGGSCH--HHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred EEecCC--CCCCC--CCcEEEEe--hhccCCCH--HHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 544322 12233 23344444 34788753 2234677766 668996544 4454
No 65
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=84.14 E-value=12 Score=31.61 Aligned_cols=114 Identities=18% Similarity=0.222 Sum_probs=64.7
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc---e
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP---F 230 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp---F 230 (424)
+.+++.+.-.+.-+|+|+|.|.|. +...++.+ + .++|| ++. +...++.+.+++ +..|++ .
T Consensus 42 ~~l~~~~~~~~~~~vLdiG~G~G~----~~~~~~~~-~-----~~v~~-~D~--~~~~~~~a~~~~----~~~~~~~~~~ 104 (194)
T 1dus_A 42 KILVENVVVDKDDDILDLGCGYGV----IGIALADE-V-----KSTTM-ADI--NRRAIKLAKENI----KLNNLDNYDI 104 (194)
T ss_dssp HHHHHHCCCCTTCEEEEETCTTSH----HHHHHGGG-S-----SEEEE-EES--CHHHHHHHHHHH----HHTTCTTSCE
T ss_pred HHHHHHcccCCCCeEEEeCCCCCH----HHHHHHHc-C-----CeEEE-EEC--CHHHHHHHHHHH----HHcCCCccce
Confidence 455666654456689999999884 44556665 1 37999 874 666666555544 344655 5
Q ss_pred EEEEEecCCCcc-cccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEeeeCC
Q 043031 231 PFNISFLTDIKD-FETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEVESN 292 (424)
Q Consensus 231 eF~~v~~~~l~~-l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~ea~ 292 (424)
+|..- ++.+ +.-..=+.++.|.+ +|+- ......+|+.+ +.|+|.-.+++.....
T Consensus 105 ~~~~~---d~~~~~~~~~~D~v~~~~~--~~~~---~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 105 RVVHS---DLYENVKDRKYNKIITNPP--IRAG---KEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp EEEEC---STTTTCTTSCEEEEEECCC--STTC---HHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred EEEEC---chhcccccCCceEEEECCC--cccc---hhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 55433 3322 22111245555554 3431 12345566555 6689987776665433
No 66
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=83.55 E-value=6.1 Score=35.75 Aligned_cols=108 Identities=14% Similarity=0.216 Sum_probs=60.5
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEE
Q 043031 155 AVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNI 234 (424)
Q Consensus 155 aIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~ 234 (424)
.+++.+...+.-+|+|+|.|.|.--.. |+.+. |. .++|| |+. +...++.+.++ .-..+|..
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~----l~~~~--~~--~~v~~-~D~--s~~~~~~a~~~--------~~~~~~~~ 84 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTEL----LTDRY--GV--NVITG-IDS--DDDMLEKAADR--------LPNTNFGK 84 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHH----HHHHH--CT--TSEEE-EES--CHHHHHHHHHH--------STTSEEEE
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHH----HHHhC--CC--CEEEE-EEC--CHHHHHHHHHh--------CCCcEEEE
Confidence 455655444556899999998864433 44332 22 47999 874 66666555544 11234433
Q ss_pred EecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEee
Q 043031 235 SFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEV 289 (424)
Q Consensus 235 v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~ 289 (424)
. +..++. .++..=+|-|...+||+.+ ...+|+.+ +.|+|.-.+++..
T Consensus 85 ~---d~~~~~-~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 85 A---DLATWK-PAQKADLLYANAVFQWVPD----HLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp C---CTTTCC-CSSCEEEEEEESCGGGSTT----HHHHHHHHGGGEEEEEEEEEEE
T ss_pred C---ChhhcC-ccCCcCEEEEeCchhhCCC----HHHHHHHHHHhcCCCeEEEEEe
Confidence 3 333333 2332223334455788743 45667666 7789986665543
No 67
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=83.16 E-value=12 Score=31.49 Aligned_cols=108 Identities=11% Similarity=0.151 Sum_probs=60.6
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEE
Q 043031 155 AVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNI 234 (424)
Q Consensus 155 aIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~ 234 (424)
.+++.+.-.+.-+|+|+|.|.| .+...|+.+. |. .++|| ++. +...++.+.+++ +..|++-.+ .
T Consensus 16 ~~~~~~~~~~~~~vldiG~G~G----~~~~~l~~~~---~~-~~v~~-vD~--~~~~~~~a~~~~----~~~~~~~~~-~ 79 (178)
T 3hm2_A 16 LAISALAPKPHETLWDIGGGSG----SIAIEWLRST---PQ-TTAVC-FEI--SEERRERILSNA----INLGVSDRI-A 79 (178)
T ss_dssp HHHHHHCCCTTEEEEEESTTTT----HHHHHHHTTS---SS-EEEEE-ECS--CHHHHHHHHHHH----HTTTCTTSE-E
T ss_pred HHHHHhcccCCCeEEEeCCCCC----HHHHHHHHHC---CC-CeEEE-EeC--CHHHHHHHHHHH----HHhCCCCCE-E
Confidence 3445555455678999999987 3555566653 32 69999 885 666666665554 455665333 3
Q ss_pred EecCCCccccc--CCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 235 SFLTDIKDFET--NEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 235 v~~~~l~~l~~--~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
+..+..+.+.- ..=++++++.. +|+ ..+++.+ +.|+|.-.+++.
T Consensus 80 ~~~d~~~~~~~~~~~~D~i~~~~~--~~~--------~~~l~~~~~~L~~gG~l~~~ 126 (178)
T 3hm2_A 80 VQQGAPRAFDDVPDNPDVIFIGGG--LTA--------PGVFAAAWKRLPVGGRLVAN 126 (178)
T ss_dssp EECCTTGGGGGCCSCCSEEEECC---TTC--------TTHHHHHHHTCCTTCEEEEE
T ss_pred EecchHhhhhccCCCCCEEEECCc--ccH--------HHHHHHHHHhcCCCCEEEEE
Confidence 32222222322 22345555544 444 2355544 568997666653
No 68
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=83.08 E-value=2.5 Score=39.78 Aligned_cols=116 Identities=11% Similarity=0.182 Sum_probs=64.0
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFN 233 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~ 233 (424)
..+++.+..... .|+|+|.|.|. +...|+.+ | .++|| |+. +...++.+.+++.+....+.-..+|.
T Consensus 73 ~~~~~~~~~~~~-~vLDlGcG~G~----~~~~l~~~--~----~~v~g-vD~--s~~~~~~a~~~~~~~~~~~~~~v~~~ 138 (299)
T 3g2m_A 73 REFATRTGPVSG-PVLELAAGMGR----LTFPFLDL--G----WEVTA-LEL--STSVLAAFRKRLAEAPADVRDRCTLV 138 (299)
T ss_dssp HHHHHHHCCCCS-CEEEETCTTTT----THHHHHTT--T----CCEEE-EES--CHHHHHHHHHHHHTSCHHHHTTEEEE
T ss_pred HHHHHhhCCCCC-cEEEEeccCCH----HHHHHHHc--C----CeEEE-EEC--CHHHHHHHHHHHhhcccccccceEEE
Confidence 445555544334 89999999998 44555655 2 36999 885 66777766666443211100234444
Q ss_pred EEecCCCcccccCCCcE-EEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEee
Q 043031 234 ISFLTDIKDFETNEGEV-VAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEV 289 (424)
Q Consensus 234 ~v~~~~l~~l~~~~~E~-laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~ 289 (424)
.- ++.++.. ++.. +||.+...+|++. +..+..+|+.+ +.|+|.-.+++..
T Consensus 139 ~~---d~~~~~~-~~~fD~v~~~~~~~~~~~--~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 139 QG---DMSAFAL-DKRFGTVVISSGSINELD--EADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp EC---BTTBCCC-SCCEEEEEECHHHHTTSC--HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eC---chhcCCc-CCCcCEEEECCcccccCC--HHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 43 3333333 3322 3333333456542 23456777766 6789987666653
No 69
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=83.07 E-value=8 Score=34.49 Aligned_cols=110 Identities=11% Similarity=0.156 Sum_probs=60.5
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFN 233 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~ 233 (424)
..|.+.+...+.-+|+|+|.|.|. +...|+.+ |+ -++|| |+. +...++.+.+++.. . .++|.
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~~---~~v~~-vD~--s~~~~~~a~~~~~~----~--~~~~~ 94 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGW----FCRWAHEH--GA---SYVLG-LDL--SEKMLARARAAGPD----T--GITYE 94 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCH----HHHHHHHT--TC---SEEEE-EES--CHHHHHHHHHTSCS----S--SEEEE
T ss_pred HHHHHhccccCCCEEEEEcCcCCH----HHHHHHHC--CC---CeEEE-EcC--CHHHHHHHHHhccc----C--CceEE
Confidence 345565654455689999999885 44556665 22 27999 874 55555555443321 1 23333
Q ss_pred EEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 234 ISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 234 ~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
.. ++.++...++..=+|-+...|||+.+ ...+|+.+ +.|+|.-.+++.
T Consensus 95 ~~---d~~~~~~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~ 143 (243)
T 3bkw_A 95 RA---DLDKLHLPQDSFDLAYSSLALHYVED----VARLFRTVHQALSPGGHFVFS 143 (243)
T ss_dssp EC---CGGGCCCCTTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEE
T ss_pred Ec---ChhhccCCCCCceEEEEeccccccch----HHHHHHHHHHhcCcCcEEEEE
Confidence 32 33333333332222223346788743 44566555 678997665553
No 70
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=82.78 E-value=8.8 Score=32.59 Aligned_cols=107 Identities=12% Similarity=0.158 Sum_probs=57.5
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEE
Q 043031 155 AVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNI 234 (424)
Q Consensus 155 aIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~ 234 (424)
.+++.+-. +.-+|+|+|.|.|. +...|+.+ + .++|| |+. +...++.+.+++. + .+|..
T Consensus 38 ~~l~~~~~-~~~~vLdiG~G~G~----~~~~l~~~--~----~~v~~-~D~--~~~~~~~a~~~~~------~--~~~~~ 95 (195)
T 3cgg_A 38 RLIDAMAP-RGAKILDAGCGQGR----IGGYLSKQ--G----HDVLG-TDL--DPILIDYAKQDFP------E--ARWVV 95 (195)
T ss_dssp HHHHHHSC-TTCEEEEETCTTTH----HHHHHHHT--T----CEEEE-EES--CHHHHHHHHHHCT------T--SEEEE
T ss_pred HHHHHhcc-CCCeEEEECCCCCH----HHHHHHHC--C----CcEEE-EcC--CHHHHHHHHHhCC------C--CcEEE
Confidence 34444422 34589999999875 44456655 2 37999 874 5666665555431 2 33332
Q ss_pred EecCCCcccccCCC--cEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEee
Q 043031 235 SFLTDIKDFETNEG--EVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEV 289 (424)
Q Consensus 235 v~~~~l~~l~~~~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~ 289 (424)
. ++.++...++ +.++.+ ...+||+. +.....+|+.+ +.|+|.-.+++..
T Consensus 96 ~---d~~~~~~~~~~~D~i~~~-~~~~~~~~--~~~~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 96 G---DLSVDQISETDFDLIVSA-GNVMGFLA--EDGREPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp C---CTTTSCCCCCCEEEEEEC-CCCGGGSC--HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c---ccccCCCCCCceeEEEEC-CcHHhhcC--hHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 2 3333333333 333333 23356652 23345566555 6689987777653
No 71
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=82.59 E-value=7.2 Score=34.16 Aligned_cols=109 Identities=15% Similarity=0.226 Sum_probs=60.2
Q ss_pred HHHHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceE
Q 043031 152 GIQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFP 231 (424)
Q Consensus 152 ANqaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFe 231 (424)
..+.|++.+...+.-+|+|+|.|.|. +...|+.+ | .++|| |+. +...++.+.++ .++ +
T Consensus 40 ~~~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~----~~v~~-vD~--s~~~~~~a~~~-------~~~--~ 97 (227)
T 3e8s_A 40 TDQAILLAILGRQPERVLDLGCGEGW----LLRALADR--G----IEAVG-VDG--DRTLVDAARAA-------GAG--E 97 (227)
T ss_dssp HHHHHHHHHHHTCCSEEEEETCTTCH----HHHHHHTT--T----CEEEE-EES--CHHHHHHHHHT-------CSS--C
T ss_pred ccHHHHHHhhcCCCCEEEEeCCCCCH----HHHHHHHC--C----CEEEE-EcC--CHHHHHHHHHh-------ccc--c
Confidence 45667777765566899999999983 55667766 2 37999 875 55555544443 222 3
Q ss_pred EEEEecCCCcccccCCC---cEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEee
Q 043031 232 FNISFLTDIKDFETNEG---EVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEV 289 (424)
Q Consensus 232 F~~v~~~~l~~l~~~~~---E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~ 289 (424)
|......++......++ +.++.+. .|| . . + ...+|+.+ +.|+|.-.+++..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~fD~v~~~~--~l~-~-~--~-~~~~l~~~~~~L~pgG~l~~~~ 152 (227)
T 3e8s_A 98 VHLASYAQLAEAKVPVGKDYDLICANF--ALL-H-Q--D-IIELLSAMRTLLVPGGALVIQT 152 (227)
T ss_dssp EEECCHHHHHTTCSCCCCCEEEEEEES--CCC-S-S--C-CHHHHHHHHHTEEEEEEEEEEE
T ss_pred cchhhHHhhcccccccCCCccEEEECc--hhh-h-h--h-HHHHHHHHHHHhCCCeEEEEEe
Confidence 33332212211122233 2444443 344 2 2 2 33566555 6789976666643
No 72
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=82.49 E-value=18 Score=32.03 Aligned_cols=109 Identities=19% Similarity=0.292 Sum_probs=61.6
Q ss_pred HHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEE
Q 043031 156 VIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNIS 235 (424)
Q Consensus 156 IleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v 235 (424)
|++.+... -.|+|+|.|.|. +...|+.+ .++|| |+. +...++.+.+++.+ .+...+|...
T Consensus 27 ~~~~~~~~--~~vLdiG~G~G~----~~~~l~~~-------~~v~~-vD~--s~~~~~~a~~~~~~----~~~~~~~~~~ 86 (243)
T 3d2l_A 27 VLEQVEPG--KRIADIGCGTGT----ATLLLADH-------YEVTG-VDL--SEEMLEIAQEKAME----TNRHVDFWVQ 86 (243)
T ss_dssp HHHHSCTT--CEEEEESCTTCH----HHHHHTTT-------SEEEE-EES--CHHHHHHHHHHHHH----TTCCCEEEEC
T ss_pred HHHHcCCC--CeEEEecCCCCH----HHHHHhhC-------CeEEE-EEC--CHHHHHHHHHhhhh----cCCceEEEEc
Confidence 44444332 479999999885 44455554 37999 874 66677666655432 3444455433
Q ss_pred ecCCCcccccCCC-cEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEee
Q 043031 236 FLTDIKDFETNEG-EVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEV 289 (424)
Q Consensus 236 ~~~~l~~l~~~~~-E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~ 289 (424)
++.++..... ++++.++ -.+||+.+. .....+|+.+ +.|+|.-.++++.
T Consensus 87 ---d~~~~~~~~~fD~v~~~~-~~~~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 87 ---DMRELELPEPVDAITILC-DSLNYLQTE-ADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp ---CGGGCCCSSCEEEEEECT-TGGGGCCSH-HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---ChhhcCCCCCcCEEEEeC-CchhhcCCH-HHHHHHHHHHHHhcCCCeEEEEEc
Confidence 3333222211 2333322 257887542 3345566655 6689988777754
No 73
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=82.06 E-value=13 Score=34.28 Aligned_cols=108 Identities=16% Similarity=0.223 Sum_probs=62.7
Q ss_pred HHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--eEEE
Q 043031 156 VIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--FPFN 233 (424)
Q Consensus 156 IleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--FeF~ 233 (424)
+++.+... .-+|+|+|.|.|. +...|+.+ | .++|| |+. +...++.+.+++ +..|++ .+|.
T Consensus 61 ~l~~~~~~-~~~vLDiGcG~G~----~~~~l~~~--~----~~v~g-vD~--s~~~~~~a~~~~----~~~~~~~~v~~~ 122 (285)
T 4htf_A 61 VLAEMGPQ-KLRVLDAGGGEGQ----TAIKMAER--G----HQVIL-CDL--SAQMIDRAKQAA----EAKGVSDNMQFI 122 (285)
T ss_dssp HHHHTCSS-CCEEEEETCTTCH----HHHHHHHT--T----CEEEE-EES--CHHHHHHHHHHH----HC-CCGGGEEEE
T ss_pred HHHhcCCC-CCEEEEeCCcchH----HHHHHHHC--C----CEEEE-EEC--CHHHHHHHHHHH----HhcCCCcceEEE
Confidence 44444333 5689999999983 56667766 2 37999 875 666666665554 345664 3443
Q ss_pred EEecCCCcccc-cCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 234 ISFLTDIKDFE-TNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 234 ~v~~~~l~~l~-~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
.. +..++. ..++..=+|-|...|||+.+ ...+|+.+ +-|+|.-.+++.
T Consensus 123 ~~---d~~~~~~~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 123 HC---AAQDVASHLETPVDLILFHAVLEWVAD----PRSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp ES---CGGGTGGGCSSCEEEEEEESCGGGCSC----HHHHHHHHHHTEEEEEEEEEE
T ss_pred Ec---CHHHhhhhcCCCceEEEECchhhcccC----HHHHHHHHHHHcCCCeEEEEE
Confidence 33 333332 33343333334456788743 24566555 678998766664
No 74
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=81.52 E-value=4.4 Score=37.68 Aligned_cols=118 Identities=14% Similarity=0.108 Sum_probs=65.4
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCC-CceEEE
Q 043031 155 AVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETIN-LPFPFN 233 (424)
Q Consensus 155 aIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lg-vpFeF~ 233 (424)
.|++.+...+.-+|+|+|.|.|. +...|+.+ | .++|| |+. +...++.+.+++.+.....+ ..+.|.
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~--~----~~v~g-vD~--s~~~l~~a~~~~~~~~~~~~~~~~~~~ 114 (293)
T 3thr_A 48 WLLGLLRQHGCHRVLDVACGTGV----DSIMLVEE--G----FSVTS-VDA--SDKMLKYALKERWNRRKEPAFDKWVIE 114 (293)
T ss_dssp HHHHHHHHTTCCEEEETTCTTSH----HHHHHHHT--T----CEEEE-EES--CHHHHHHHHHHHHHTTTSHHHHTCEEE
T ss_pred HHHHHhcccCCCEEEEecCCCCH----HHHHHHHC--C----CeEEE-EEC--CHHHHHHHHHhhhhcccccccceeeEe
Confidence 34444443455689999999985 44555655 2 27999 885 77777777666533211111 122332
Q ss_pred EEecCCCcccc---cCCCcEEEEecc-ccccccCC---CcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 234 ISFLTDIKDFE---TNEGEVVAVYSP-VHLSHMIR---KPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 234 ~v~~~~l~~l~---~~~~E~laVN~~-~~Lh~l~~---~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
.- ++.++. ..++..=+|-|. ..+||+.+ +......+|+.+ +.|+|.-.++++
T Consensus 115 ~~---d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 115 EA---NWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp EC---CGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ec---ChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 22 332222 233433334444 56889875 223355677665 668997666654
No 75
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=81.36 E-value=19 Score=31.73 Aligned_cols=90 Identities=12% Similarity=0.088 Sum_probs=48.5
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcccc
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFE 244 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~ 244 (424)
.-.|+|+|.|.|.- ...|+.+ || ++. +...++.+.++ ++ +|... ++.++.
T Consensus 48 ~~~vLDiG~G~G~~----~~~l~~~----------~~-vD~--s~~~~~~a~~~--------~~--~~~~~---d~~~~~ 97 (219)
T 1vlm_A 48 EGRGVEIGVGTGRF----AVPLKIK----------IG-VEP--SERMAEIARKR--------GV--FVLKG---TAENLP 97 (219)
T ss_dssp SSCEEEETCTTSTT----HHHHTCC----------EE-EES--CHHHHHHHHHT--------TC--EEEEC---BTTBCC
T ss_pred CCcEEEeCCCCCHH----HHHHHHH----------hc-cCC--CHHHHHHHHhc--------CC--EEEEc---ccccCC
Confidence 34799999998863 3344433 88 874 55555544433 43 33322 333333
Q ss_pred cCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 245 TNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 245 ~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
..++..=+|-+...|||+.+ ...+|+.+ +.|+|.-.+++.
T Consensus 98 ~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~ 138 (219)
T 1vlm_A 98 LKDESFDFALMVTTICFVDD----PERALKEAYRILKKGGYLIVG 138 (219)
T ss_dssp SCTTCEEEEEEESCGGGSSC----HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCeeEEEEcchHhhccC----HHHHHHHHHHHcCCCcEEEEE
Confidence 33332222223345788743 34566555 678997655553
No 76
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=80.20 E-value=8.5 Score=32.39 Aligned_cols=103 Identities=14% Similarity=0.142 Sum_probs=58.5
Q ss_pred HHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc-eEEEE
Q 043031 156 VIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP-FPFNI 234 (424)
Q Consensus 156 IleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp-FeF~~ 234 (424)
|++.+.-.+.-+|+|+|.|.|. +...|+. + ..++|| |+. +...++.+.+++ +..|++ .+|..
T Consensus 27 ~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~-----~-~~~v~~-vD~--~~~~~~~a~~~~----~~~~~~~~~~~~ 89 (183)
T 2yxd_A 27 SIGKLNLNKDDVVVDVGCGSGG----MTVEIAK-----R-CKFVYA-IDY--LDGAIEVTKQNL----AKFNIKNCQIIK 89 (183)
T ss_dssp HHHHHCCCTTCEEEEESCCCSH----HHHHHHT-----T-SSEEEE-EEC--SHHHHHHHHHHH----HHTTCCSEEEEE
T ss_pred HHHHcCCCCCCEEEEeCCCCCH----HHHHHHh-----c-CCeEEE-EeC--CHHHHHHHHHHH----HHcCCCcEEEEE
Confidence 3444443444589999999886 4444554 2 258999 874 666666665554 345552 44432
Q ss_pred EecCCCcc-cccCCCcEEEEeccccccccCCCcchHHHHHHHHHhcCCCeEEEEee
Q 043031 235 SFLTDIKD-FETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEV 289 (424)
Q Consensus 235 v~~~~l~~-l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvl~E~ 289 (424)
- ++.+ +.-..=+.++.+.. .....+++.++++ |.-.+++..
T Consensus 90 ~---d~~~~~~~~~~D~i~~~~~----------~~~~~~l~~~~~~-~gG~l~~~~ 131 (183)
T 2yxd_A 90 G---RAEDVLDKLEFNKAFIGGT----------KNIEKIIEILDKK-KINHIVANT 131 (183)
T ss_dssp S---CHHHHGGGCCCSEEEECSC----------SCHHHHHHHHHHT-TCCEEEEEE
T ss_pred C---CccccccCCCCcEEEECCc----------ccHHHHHHHHhhC-CCCEEEEEe
Confidence 2 3322 22112245555544 2356789999988 875555543
No 77
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=79.90 E-value=5.8 Score=36.28 Aligned_cols=98 Identities=20% Similarity=0.258 Sum_probs=58.8
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcccc
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFE 244 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~ 244 (424)
.-.|+|+|.|.|. +...|+.+ + .++|| |+. +...++.+.+++. + .+|.. .++.++.
T Consensus 51 ~~~vLDiGcG~G~----~~~~l~~~--~----~~v~g-vD~--s~~~~~~a~~~~~------~--~~~~~---~d~~~~~ 106 (263)
T 3pfg_A 51 AASLLDVACGTGM----HLRHLADS--F----GTVEG-LEL--SADMLAIARRRNP------D--AVLHH---GDMRDFS 106 (263)
T ss_dssp CCEEEEETCTTSH----HHHHHTTT--S----SEEEE-EES--CHHHHHHHHHHCT------T--SEEEE---CCTTTCC
T ss_pred CCcEEEeCCcCCH----HHHHHHHc--C----CeEEE-EEC--CHHHHHHHHhhCC------C--CEEEE---CChHHCC
Confidence 3579999999884 55666665 2 26999 875 6666666555432 3 33332 2443333
Q ss_pred cCCCcEEEEeccc-cccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 245 TNEGEVVAVYSPV-HLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 245 ~~~~E~laVN~~~-~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
. ++..=+|-|.+ .|||+.+ +.....+|+.+ +.|+|.-+++++
T Consensus 107 ~-~~~fD~v~~~~~~l~~~~~-~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 107 L-GRRFSAVTCMFSSIGHLAG-QAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp C-SCCEEEEEECTTGGGGSCH-HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred c-cCCcCEEEEcCchhhhcCC-HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 3 33333333444 6888753 23355666655 667998888886
No 78
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=79.65 E-value=20 Score=32.92 Aligned_cols=108 Identities=12% Similarity=0.119 Sum_probs=59.9
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcccc
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFE 244 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~ 244 (424)
.-+|+|+|.|.|.--. .|+.+ + ..++|| |+. +...++.+.+++ +..|++-..+.+. .++.++.
T Consensus 65 ~~~vLDiGcG~G~~~~----~l~~~--~---~~~v~g-vD~--s~~~~~~a~~~~----~~~~~~~~v~~~~-~d~~~~~ 127 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLL----KYERA--G---IGEYYG-VDI--AEVSINDARVRA----RNMKRRFKVFFRA-QDSYGRH 127 (298)
T ss_dssp TCEEEEETCTTTTTHH----HHHHH--T---CSEEEE-EES--CHHHHHHHHHHH----HTSCCSSEEEEEE-SCTTTSC
T ss_pred CCeEEEECCCCCHHHH----HHHHC--C---CCEEEE-EEC--CHHHHHHHHHHH----HhcCCCccEEEEE-CCccccc
Confidence 3589999999986332 24444 1 148999 875 666666665554 3445533333332 2443333
Q ss_pred c-CCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEee
Q 043031 245 T-NEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEV 289 (424)
Q Consensus 245 ~-~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~ 289 (424)
. .++..=+|-|...+||+.........+|+.+ +.|+|.-.+++..
T Consensus 128 ~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 128 MDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp CCCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 3 2332222333345787644334455677665 6689976666543
No 79
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=79.63 E-value=4.6 Score=35.83 Aligned_cols=113 Identities=16% Similarity=0.225 Sum_probs=61.9
Q ss_pred hcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc-eEEEEEecC
Q 043031 160 VSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP-FPFNISFLT 238 (424)
Q Consensus 160 ~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp-FeF~~v~~~ 238 (424)
+...+.-+|+|+|.|.|. +...|+.+ + |. .++|| |+. +...++.+.++..+-++..+++ .+|...
T Consensus 23 l~~~~~~~vLDiGcG~G~----~~~~la~~--~-p~-~~v~g-vD~--s~~~l~~~~~~a~~~~~~~~~~~v~~~~~--- 88 (218)
T 3mq2_A 23 LRSQYDDVVLDVGTGDGK----HPYKVARQ--N-PS-RLVVA-LDA--DKSRMEKISAKAAAKPAKGGLPNLLYLWA--- 88 (218)
T ss_dssp HHTTSSEEEEEESCTTCH----HHHHHHHH--C-TT-EEEEE-EES--CGGGGHHHHHHHTSCGGGTCCTTEEEEEC---
T ss_pred hhccCCCEEEEecCCCCH----HHHHHHHH--C-CC-CEEEE-EEC--CHHHHHHHHHHHHHhhhhcCCCceEEEec---
Confidence 334456789999999885 44455555 2 32 69999 985 5655655544444444455653 455433
Q ss_pred CCcccccCCC-cEEEEeccc-cc--cccCCCcchHHHHHHHH-HhcCCCeEEEEeee
Q 043031 239 DIKDFETNEG-EVVAVYSPV-HL--SHMIRKPNCLETFLTEL-RKINPCVMVVIEVE 290 (424)
Q Consensus 239 ~l~~l~~~~~-E~laVN~~~-~L--h~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~e 290 (424)
+..++...++ +.+.++..+ .+ ||+.+. ..+|+.+ +.|+|.-.+++...
T Consensus 89 d~~~l~~~~~~d~v~~~~~~~~~~~~~~~~~----~~~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 89 TAERLPPLSGVGELHVLMPWGSLLRGVLGSS----PEMLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp CSTTCCSCCCEEEEEEESCCHHHHHHHHTSS----SHHHHHHHHTEEEEEEEEEEEE
T ss_pred chhhCCCCCCCCEEEEEccchhhhhhhhccH----HHHHHHHHHHcCCCcEEEEEec
Confidence 3333332221 334333322 22 244332 3455555 67899887777443
No 80
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=79.30 E-value=14 Score=36.00 Aligned_cols=108 Identities=15% Similarity=0.191 Sum_probs=57.6
Q ss_pred HHHHhhhc-CCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEE
Q 043031 154 QAVIENVS-SAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPF 232 (424)
Q Consensus 154 qaIleA~~-g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF 232 (424)
..|++.+. -.+.-+|+|+|.|.|. +...|+.+. | .+++|+ ++. ...++ .|+... ..+|
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---~-~~~~~~-~D~---~~~~~--------~a~~~~-~v~~ 256 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGR----NLELIISKY---P-LIKGIN-FDL---PQVIE--------NAPPLS-GIEH 256 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSH----HHHHHHHHC---T-TCEEEE-EEC---HHHHT--------TCCCCT-TEEE
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcH----HHHHHHHHC---C-CCeEEE-eCh---HHHHH--------hhhhcC-CCEE
Confidence 45666664 2345789999999885 556666662 3 378898 763 22232 222211 2344
Q ss_pred EEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEE-EEeee
Q 043031 233 NISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMV-VIEVE 290 (424)
Q Consensus 233 ~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvv-l~E~e 290 (424)
..- +..+ .+...++++ +...|||+.+ .....+|+.+ +.|+|.-.+ ++|..
T Consensus 257 ~~~---d~~~-~~~~~D~v~--~~~~lh~~~d--~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 257 VGG---DMFA-SVPQGDAMI--LKAVCHNWSD--EKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp EEC---CTTT-CCCCEEEEE--EESSGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EeC---Cccc-CCCCCCEEE--EecccccCCH--HHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 332 3322 111123333 4456788754 2233666665 667996544 44544
No 81
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=79.14 E-value=18 Score=31.36 Aligned_cols=104 Identities=19% Similarity=0.247 Sum_probs=58.6
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcccc
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFE 244 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~ 244 (424)
.-+|+|+|.|.|.-...++ +. ++ .++|| |+. +...++.+.+++.+ .+..++|... ++.++.
T Consensus 24 ~~~vLDiGcG~G~~~~~~~---~~-~~-----~~v~~-vD~--s~~~~~~a~~~~~~----~~~~~~~~~~---d~~~~~ 84 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIF---VE-DG-----YKTYG-IEI--SDLQLKKAENFSRE----NNFKLNISKG---DIRKLP 84 (209)
T ss_dssp CSEEEEESCCSSSCTHHHH---HH-TT-----CEEEE-EEC--CHHHHHHHHHHHHH----HTCCCCEEEC---CTTSCC
T ss_pred CCEEEEECCCCCHHHHHHH---Hh-CC-----CEEEE-EEC--CHHHHHHHHHHHHh----cCCceEEEEC---chhhCC
Confidence 3479999999886544333 22 22 48999 885 67777766665543 2333444332 333343
Q ss_pred cCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEee
Q 043031 245 TNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEV 289 (424)
Q Consensus 245 ~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~ 289 (424)
..++..=+|-+...+||+. +.....+|+.+ +.|+|.-++++..
T Consensus 85 ~~~~~fD~v~~~~~l~~~~--~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 85 FKDESMSFVYSYGTIFHMR--KNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp SCTTCEEEEEECSCGGGSC--HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCceeEEEEcChHHhCC--HHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 3334322333335578873 23355666655 6789976666543
No 82
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=78.99 E-value=12 Score=36.21 Aligned_cols=108 Identities=15% Similarity=0.127 Sum_probs=57.9
Q ss_pred HHHhhh--cCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEE
Q 043031 155 AVIENV--SSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPF 232 (424)
Q Consensus 155 aIleA~--~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF 232 (424)
.|++.+ .=.+.-+|+|+|.|.|. +...|+.+. | .+++|+ ++. ...++ .|+... ..+|
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~-~D~---~~~~~--------~a~~~~-~v~~ 240 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGG----VTKLIHEIF---P-HLKCTV-FDQ---PQVVG--------NLTGNE-NLNF 240 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSH----HHHHHHHHC---T-TSEEEE-EEC---HHHHS--------SCCCCS-SEEE
T ss_pred HHHHhcchhccCCCEEEEECCCcCH----HHHHHHHHC---C-CCeEEE-ecc---HHHHh--------hcccCC-CcEE
Confidence 466655 11233589999999885 566666663 4 378999 864 23332 222211 1444
Q ss_pred EEEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCC---C-eEEEEeeeC
Q 043031 233 NISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINP---C-VMVVIEVES 291 (424)
Q Consensus 233 ~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P---~-vvvl~E~ea 291 (424)
..- ++.+ .+..-++++.+. .||++.+ .....+|+.+ +.|+| . .++++|.-.
T Consensus 241 ~~~---d~~~-~~~~~D~v~~~~--vlh~~~d--~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 241 VGG---DMFK-SIPSADAVLLKW--VLHDWND--EQSLKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp EEC---CTTT-CCCCCSEEEEES--CGGGSCH--HHHHHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred EeC---ccCC-CCCCceEEEEcc--cccCCCH--HHHHHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 332 3322 121245555554 4788753 2233677666 56799 4 466666543
No 83
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=78.65 E-value=5.7 Score=36.51 Aligned_cols=115 Identities=20% Similarity=0.199 Sum_probs=61.2
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFN 233 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~ 233 (424)
+.|++.+...+.-+|+|+|.|.|. +...|+. |. .++|| |+. +...++.+ +... ..+|.
T Consensus 24 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~-----~~-~~v~g-vD~--s~~~~~~a--------~~~~-~~~~~ 81 (261)
T 3ege_A 24 NAIINLLNLPKGSVIADIGAGTGG----YSVALAN-----QG-LFVYA-VEP--SIVMRQQA--------VVHP-QVEWF 81 (261)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTSH----HHHHHHT-----TT-CEEEE-ECS--CHHHHHSS--------CCCT-TEEEE
T ss_pred HHHHHHhCCCCCCEEEEEcCcccH----HHHHHHh-----CC-CEEEE-EeC--CHHHHHHH--------Hhcc-CCEEE
Confidence 445555544555689999999886 3444553 22 58999 885 44444322 2221 33333
Q ss_pred EEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCC-eEEEEeeeCCCCCCch
Q 043031 234 ISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPC-VMVVIEVESNDNLQTF 298 (424)
Q Consensus 234 ~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~-vvvl~E~ea~~ns~~F 298 (424)
. .+..++...++..=+|-|...+||+.+ ...+|+.+ +.|+ . .+++++.+.+.....+
T Consensus 82 ~---~d~~~~~~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~ 140 (261)
T 3ege_A 82 T---GYAENLALPDKSVDGVISILAIHHFSH----LEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIW 140 (261)
T ss_dssp C---CCTTSCCSCTTCBSEEEEESCGGGCSS----HHHHHHHHHHHBC-SSCEEEEEECGGGCCCCG
T ss_pred E---CchhhCCCCCCCEeEEEEcchHhhccC----HHHHHHHHHHHhC-CcEEEEEEcCCchhHHHH
Confidence 2 244444433332222333344788843 34455544 6677 5 4777777655544333
No 84
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=78.39 E-value=16 Score=35.15 Aligned_cols=99 Identities=15% Similarity=0.161 Sum_probs=53.5
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCccc
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDF 243 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l 243 (424)
+.-+|+|+|.|.|. +...|+.+. | .+++|+ ++. ...++. |+... ..+|..- ++.+
T Consensus 188 ~~~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~-~D~---~~~~~~--------a~~~~-~v~~~~~---d~~~- 242 (352)
T 1fp2_A 188 GLESIVDVGGGTGT----TAKIICETF---P-KLKCIV-FDR---PQVVEN--------LSGSN-NLTYVGG---DMFT- 242 (352)
T ss_dssp TCSEEEEETCTTSH----HHHHHHHHC---T-TCEEEE-EEC---HHHHTT--------CCCBT-TEEEEEC---CTTT-
T ss_pred cCceEEEeCCCccH----HHHHHHHHC---C-CCeEEE-eeC---HHHHhh--------cccCC-CcEEEec---cccC-
Confidence 34689999999994 566677663 3 378999 873 222322 22221 1444332 2222
Q ss_pred ccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCC----CeEEEEeeeC
Q 043031 244 ETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINP----CVMVVIEVES 291 (424)
Q Consensus 244 ~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P----~vvvl~E~ea 291 (424)
.+..-++++.+ ..|||+.+ + ....+|+.+ +.|+| ..++++|...
T Consensus 243 ~~p~~D~v~~~--~~lh~~~d-~-~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 243 SIPNADAVLLK--YILHNWTD-K-DCLRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp CCCCCSEEEEE--SCGGGSCH-H-HHHHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred CCCCccEEEee--hhhccCCH-H-HHHHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 11123444444 45788753 1 233667665 56799 4566666544
No 85
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=77.10 E-value=16 Score=31.48 Aligned_cols=108 Identities=9% Similarity=0.069 Sum_probs=56.6
Q ss_pred eEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcccc-
Q 043031 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFE- 244 (424)
Q Consensus 166 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~- 244 (424)
-.|+|+|.|.|. +...|+.+- +|. -++|| |+. +...++.+.+++ +..|+.=.+..+. .+..++.
T Consensus 24 ~~vLDlGcG~G~----~~~~l~~~~-~~~--~~v~~-vD~--s~~~~~~a~~~~----~~~~~~~~v~~~~-~d~~~~~~ 88 (197)
T 3eey_A 24 DTVVDATCGNGN----DTAFLASLV-GEN--GRVFG-FDI--QDKAIANTTKKL----TDLNLIDRVTLIK-DGHQNMDK 88 (197)
T ss_dssp CEEEESCCTTSH----HHHHHHHHH-CTT--CEEEE-ECS--CHHHHHHHHHHH----HHTTCGGGEEEEC-SCGGGGGG
T ss_pred CEEEEcCCCCCH----HHHHHHHHh-CCC--CEEEE-EEC--CHHHHHHHHHHH----HHcCCCCCeEEEE-CCHHHHhh
Confidence 379999999883 444555553 222 38999 884 666676666554 3446522233332 2333321
Q ss_pred cCCC--cEEEEecccc---ccccCCCcchHHHHHHH-HHhcCCCeEEEEe
Q 043031 245 TNEG--EVVAVYSPVH---LSHMIRKPNCLETFLTE-LRKINPCVMVVIE 288 (424)
Q Consensus 245 ~~~~--E~laVN~~~~---Lh~l~~~~~~~~~~L~~-ir~L~P~vvvl~E 288 (424)
..++ +.++.|..+. -|+....+.....+|+. .+.|+|.-.+++.
T Consensus 89 ~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~ 138 (197)
T 3eey_A 89 YIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVV 138 (197)
T ss_dssp TCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEE
Confidence 1122 4666676551 12222222223345554 4668997655543
No 86
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=77.07 E-value=21 Score=34.24 Aligned_cols=135 Identities=12% Similarity=0.124 Sum_probs=76.9
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFN 233 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~ 233 (424)
..|++.+.. --.|+|+|.|.|. |--.++. .+|. .++++ ++- +...++-+.. ++..+|+++.|.
T Consensus 124 ~~i~~~i~~--p~~VLDLGCG~Gp----LAl~~~~---~~p~-a~y~a-~DI--d~~~le~a~~----~l~~~g~~~~~~ 186 (281)
T 3lcv_B 124 RELFRHLPR--PNTLRDLACGLNP----LAAPWMG---LPAE-TVYIA-SDI--DARLVGFVDE----ALTRLNVPHRTN 186 (281)
T ss_dssp HHHGGGSCC--CSEEEETTCTTGG----GCCTTTT---CCTT-CEEEE-EES--BHHHHHHHHH----HHHHTTCCEEEE
T ss_pred HHHHhccCC--CceeeeeccCccH----HHHHHHh---hCCC-CEEEE-EeC--CHHHHHHHHH----HHHhcCCCceEE
Confidence 456666633 3478999888663 2222222 2343 79999 874 5555655544 456779998775
Q ss_pred EEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHHHhcCCCeEEEEeee--CCCCCCchHHHHHHHHHHHHH
Q 043031 234 ISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEVE--SNDNLQTFEDRFFGTLFHFGA 311 (424)
Q Consensus 234 ~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvl~E~e--a~~ns~~F~~RF~eaL~~Ysa 311 (424)
.... ..+.--.+.+++.+|-. +|+|-+.. ....++.+..|+|..|++.=+- .+.-++-+. ..|+.
T Consensus 187 v~D~--~~~~p~~~~DvaL~lkt--i~~Le~q~--kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~-------~~Y~~ 253 (281)
T 3lcv_B 187 VADL--LEDRLDEPADVTLLLKT--LPCLETQQ--RGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGMF-------QNYSQ 253 (281)
T ss_dssp ECCT--TTSCCCSCCSEEEETTC--HHHHHHHS--TTHHHHHHHHSSCSEEEEEEECC-------CHH-------HHHHH
T ss_pred Eeee--cccCCCCCcchHHHHHH--HHHhhhhh--hHHHHHHHHHhCCCCEEEeccchhhcCCCcchh-------hHHHH
Confidence 5521 21122233455556644 67774322 2345599999999998887444 333344443 45777
Q ss_pred HHHhhhh
Q 043031 312 LFDCLEV 318 (424)
Q Consensus 312 lFDsLda 318 (424)
.|+..-.
T Consensus 254 ~~e~~~~ 260 (281)
T 3lcv_B 254 SFESQAR 260 (281)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777543
No 87
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=76.91 E-value=4.3 Score=39.41 Aligned_cols=119 Identities=15% Similarity=0.227 Sum_probs=68.2
Q ss_pred HHHHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceE
Q 043031 152 GIQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFP 231 (424)
Q Consensus 152 ANqaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFe 231 (424)
..+.+++.+.....-+|+|+|.|.|. +...|+.+ +| . .++|+ |+. +...++.+.+++. ..|+..+
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~----~~~~la~~--~~-~-~~v~~-vD~--s~~~l~~a~~~~~----~~~~~~~ 248 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGV----LSVAFARH--SP-K-IRLTL-CDV--SAPAVEASRATLA----ANGVEGE 248 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSH----HHHHHHHH--CT-T-CBCEE-EES--BHHHHHHHHHHHH----HTTCCCE
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCH----HHHHHHHH--CC-C-CEEEE-EEC--CHHHHHHHHHHHH----HhCCCCE
Confidence 35677777743333479999999886 34445554 33 2 58999 874 6767776666553 3566655
Q ss_pred EEEEecCCCcccccCCCcEEEEeccccccccCC-CcchHHHHHHHH-HhcCCCeEEEEeee
Q 043031 232 FNISFLTDIKDFETNEGEVVAVYSPVHLSHMIR-KPNCLETFLTEL-RKINPCVMVVIEVE 290 (424)
Q Consensus 232 F~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~-~~~~~~~~L~~i-r~L~P~vvvl~E~e 290 (424)
| +. .+..+..-..=+.++.|.+| |+-.. .......+++.+ +.|+|.-.+++..+
T Consensus 249 ~--~~-~d~~~~~~~~fD~Iv~~~~~--~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 249 V--FA-SNVFSEVKGRFDMIISNPPF--HDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp E--EE-CSTTTTCCSCEEEEEECCCC--CSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred E--EE-ccccccccCCeeEEEECCCc--ccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 5 22 23322111111456666654 43221 112345677666 66899877766543
No 88
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=76.60 E-value=11 Score=33.93 Aligned_cols=107 Identities=15% Similarity=0.209 Sum_probs=59.1
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCccc
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDF 243 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l 243 (424)
+.-.|+|+|.|.|. +...|+.+. . .++|| |+. +...++.+.+++...- +...+|... ++.++
T Consensus 79 ~~~~vLDiGcG~G~----~~~~l~~~~---~--~~v~~-vD~--s~~~~~~a~~~~~~~~---~~~~~~~~~---d~~~~ 140 (241)
T 2ex4_A 79 GTSCALDCGAGIGR----ITKRLLLPL---F--REVDM-VDI--TEDFLVQAKTYLGEEG---KRVRNYFCC---GLQDF 140 (241)
T ss_dssp CCSEEEEETCTTTH----HHHHTTTTT---C--SEEEE-EES--CHHHHHHHHHHTGGGG---GGEEEEEEC---CGGGC
T ss_pred CCCEEEEECCCCCH----HHHHHHHhc---C--CEEEE-EeC--CHHHHHHHHHHhhhcC---CceEEEEEc---Chhhc
Confidence 35689999999885 444555542 2 37999 874 6666666655543221 122344332 34443
Q ss_pred ccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEE-eee
Q 043031 244 ETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVI-EVE 290 (424)
Q Consensus 244 ~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~-E~e 290 (424)
...++..=+|-|...|||+.+ ..+..+|+.+ +.|+|.-.+++ +..
T Consensus 141 ~~~~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 141 TPEPDSYDVIWIQWVIGHLTD--QHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp CCCSSCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEcchhhhCCH--HHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 333332222223345788753 2244666655 66899765555 443
No 89
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=76.02 E-value=33 Score=30.09 Aligned_cols=106 Identities=10% Similarity=0.206 Sum_probs=59.4
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCC-ceEEEEEecCCCccc
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINL-PFPFNISFLTDIKDF 243 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgv-pFeF~~v~~~~l~~l 243 (424)
.-.|+|+|.|.|. +...||.+. |. .++|| |+. +...++.+.+++. ..|+ ..+|..- +..++
T Consensus 42 ~~~vLDiGcG~G~----~~~~la~~~---p~-~~v~g-vD~--s~~~l~~a~~~~~----~~~~~~v~~~~~---d~~~~ 103 (214)
T 1yzh_A 42 NPIHVEVGSGKGA----FVSGMAKQN---PD-INYIG-IDI--QKSVLSYALDKVL----EVGVPNIKLLWV---DGSDL 103 (214)
T ss_dssp CCEEEEESCTTSH----HHHHHHHHC---TT-SEEEE-EES--CHHHHHHHHHHHH----HHCCSSEEEEEC---CSSCG
T ss_pred CCeEEEEccCcCH----HHHHHHHHC---CC-CCEEE-EEc--CHHHHHHHHHHHH----HcCCCCEEEEeC---CHHHH
Confidence 3469999999884 445566552 32 58999 884 6677766666543 3354 2444332 33332
Q ss_pred c--cCCC--cEEEEeccccccccCCCcc----hHHHHHHHH-HhcCCCeEEEEeee
Q 043031 244 E--TNEG--EVVAVYSPVHLSHMIRKPN----CLETFLTEL-RKINPCVMVVIEVE 290 (424)
Q Consensus 244 ~--~~~~--E~laVN~~~~Lh~l~~~~~----~~~~~L~~i-r~L~P~vvvl~E~e 290 (424)
. +.++ +.+++|.... ....... ....+|+.+ +.|+|.-+++++.+
T Consensus 104 ~~~~~~~~~D~i~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 104 TDYFEDGEIDRLYLNFSDP--WPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp GGTSCTTCCSEEEEESCCC--CCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred HhhcCCCCCCEEEEECCCC--ccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 2 2232 4677775421 1110000 124677766 45899988777654
No 90
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=75.38 E-value=25 Score=35.89 Aligned_cols=119 Identities=11% Similarity=0.072 Sum_probs=68.8
Q ss_pred HHHHHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHH---HHHhCC
Q 043031 151 AGIQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLAN---FAETIN 227 (424)
Q Consensus 151 tANqaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~---fA~~lg 227 (424)
..-..|++.+.-.+.=+|+|+|.|.|. +.-.+|.+.+ .-+++| |+. +...++-+.++..+ .++..|
T Consensus 160 ~~i~~il~~l~l~~gd~VLDLGCGtG~----l~l~lA~~~g----~~kVvG-IDi--S~~~lelAr~n~e~frkr~~~~G 228 (438)
T 3uwp_A 160 DLVAQMIDEIKMTDDDLFVDLGSGVGQ----VVLQVAAATN----CKHHYG-VEK--ADIPAKYAETMDREFRKWMKWYG 228 (438)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCTTSH----HHHHHHHHCC----CSEEEE-EEC--CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHHCC----CCEEEE-EeC--CHHHHHHHHHHHHHHHHHHHHhC
Confidence 334556676654455579999998885 3444555432 137999 985 55555555444433 456667
Q ss_pred Cc-eEEEEEecCCCccccc----CCCcEEEEeccccccccCCCcchHHHHHHHHHhcCCCeEEEE
Q 043031 228 LP-FPFNISFLTDIKDFET----NEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVI 287 (424)
Q Consensus 228 vp-FeF~~v~~~~l~~l~~----~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvl~ 287 (424)
+. -.+..+. .++.++.. ..-.+|++|..+ + .++....+....|.|+|.-.+++
T Consensus 229 l~~~rVefi~-GD~~~lp~~d~~~~aDVVf~Nn~~--F----~pdl~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 229 KKHAEYTLER-GDFLSEEWRERIANTSVIFVNNFA--F----GPEVDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp BCCCEEEEEE-CCTTSHHHHHHHHTCSEEEECCTT--C----CHHHHHHHHHHHTTSCTTCEEEE
T ss_pred CCCCCeEEEE-CcccCCccccccCCccEEEEcccc--c----CchHHHHHHHHHHcCCCCcEEEE
Confidence 62 2333332 34444222 233577778653 2 23445556667789999777666
No 91
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=75.11 E-value=15 Score=32.12 Aligned_cols=104 Identities=13% Similarity=0.185 Sum_probs=57.4
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFN 233 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~ 233 (424)
..|++.+. .+.-+|+|+|.|.|. +...|+.+ + .++|| |+. +...++.+ +.... +|.
T Consensus 23 ~~l~~~~~-~~~~~vLdiG~G~G~----~~~~l~~~-~-----~~~~~-~D~--~~~~~~~~--------~~~~~--~~~ 78 (230)
T 3cc8_A 23 PNLLKHIK-KEWKEVLDIGCSSGA----LGAAIKEN-G-----TRVSG-IEA--FPEAAEQA--------KEKLD--HVV 78 (230)
T ss_dssp HHHHTTCC-TTCSEEEEETCTTSH----HHHHHHTT-T-----CEEEE-EES--SHHHHHHH--------HTTSS--EEE
T ss_pred HHHHHHhc-cCCCcEEEeCCCCCH----HHHHHHhc-C-----CeEEE-EeC--CHHHHHHH--------HHhCC--cEE
Confidence 45666655 456789999999883 55667766 1 37999 874 55444433 32222 222
Q ss_pred EEecCCCcc--cccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 234 ISFLTDIKD--FETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 234 ~v~~~~l~~--l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
..++.+ +...++..=+|-+...|||+.+ ...+|+.+ +.|+|.-.+++.
T Consensus 79 ---~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~~gG~l~~~ 129 (230)
T 3cc8_A 79 ---LGDIETMDMPYEEEQFDCVIFGDVLEHLFD----PWAVIEKVKPYIKQNGVILAS 129 (230)
T ss_dssp ---ESCTTTCCCCSCTTCEEEEEEESCGGGSSC----HHHHHHHTGGGEEEEEEEEEE
T ss_pred ---EcchhhcCCCCCCCccCEEEECChhhhcCC----HHHHHHHHHHHcCCCCEEEEE
Confidence 223333 2233332222223345788753 34677666 557997555553
No 92
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=74.60 E-value=22 Score=31.59 Aligned_cols=99 Identities=11% Similarity=0.133 Sum_probs=55.9
Q ss_pred eEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCC--ceEEEEEecCCCccc
Q 043031 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINL--PFPFNISFLTDIKDF 243 (424)
Q Consensus 166 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgv--pFeF~~v~~~~l~~l 243 (424)
-.|+|+|.|.|. +...|+. + ..++|| |+. +...++.+.+++.+ .+. ..+|... ++.++
T Consensus 68 ~~vLDiGcG~G~----~~~~l~~-----~-~~~v~g-vD~--s~~~~~~a~~~~~~----~~~~~~v~~~~~---d~~~~ 127 (235)
T 3lcc_A 68 GRALVPGCGGGH----DVVAMAS-----P-ERFVVG-LDI--SESALAKANETYGS----SPKAEYFSFVKE---DVFTW 127 (235)
T ss_dssp EEEEEETCTTCH----HHHHHCB-----T-TEEEEE-ECS--CHHHHHHHHHHHTT----SGGGGGEEEECC---CTTTC
T ss_pred CCEEEeCCCCCH----HHHHHHh-----C-CCeEEE-EEC--CHHHHHHHHHHhhc----cCCCcceEEEEC---chhcC
Confidence 499999999884 3345553 2 268999 885 66667766665432 222 2334332 33332
Q ss_pred ccCCCcEEEEeccccccccCCCcchHHHHHHHHH-hcCCCeEEEE
Q 043031 244 ETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELR-KINPCVMVVI 287 (424)
Q Consensus 244 ~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir-~L~P~vvvl~ 287 (424)
.. ++..=+|-+...|||+. +.....+|+.++ .|+|.-.+++
T Consensus 128 ~~-~~~fD~v~~~~~l~~~~--~~~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 128 RP-TELFDLIFDYVFFCAIE--PEMRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp CC-SSCEEEEEEESSTTTSC--GGGHHHHHHHHHHHEEEEEEEEE
T ss_pred CC-CCCeeEEEEChhhhcCC--HHHHHHHHHHHHHHCCCCcEEEE
Confidence 21 11122233344578874 234667777664 5899776665
No 93
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=74.34 E-value=18 Score=33.60 Aligned_cols=91 Identities=15% Similarity=0.216 Sum_probs=53.0
Q ss_pred EEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcccccC
Q 043031 167 HIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFETN 246 (424)
Q Consensus 167 HIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~~~ 246 (424)
.|+|+|.|.|. +...|+.+ + -++|| |+. +...++. |+.. -.++|..- +.+++.+.
T Consensus 42 ~vLDvGcGtG~----~~~~l~~~--~----~~v~g-vD~--s~~ml~~--------a~~~-~~v~~~~~---~~e~~~~~ 96 (257)
T 4hg2_A 42 DALDCGCGSGQ----ASLGLAEF--F----ERVHA-VDP--GEAQIRQ--------ALRH-PRVTYAVA---PAEDTGLP 96 (257)
T ss_dssp EEEEESCTTTT----THHHHHTT--C----SEEEE-EES--CHHHHHT--------CCCC-TTEEEEEC---CTTCCCCC
T ss_pred CEEEEcCCCCH----HHHHHHHh--C----CEEEE-EeC--cHHhhhh--------hhhc-CCceeehh---hhhhhccc
Confidence 58999999985 34556655 2 26899 885 5554443 2222 12333332 44455555
Q ss_pred CCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEE
Q 043031 247 EGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVI 287 (424)
Q Consensus 247 ~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~ 287 (424)
++..=+|-|...+|++ + .+.+|+.+ |-|+|.-++++
T Consensus 97 ~~sfD~v~~~~~~h~~-~----~~~~~~e~~rvLkpgG~l~~ 133 (257)
T 4hg2_A 97 PASVDVAIAAQAMHWF-D----LDRFWAELRRVARPGAVFAA 133 (257)
T ss_dssp SSCEEEEEECSCCTTC-C----HHHHHHHHHHHEEEEEEEEE
T ss_pred CCcccEEEEeeehhHh-h----HHHHHHHHHHHcCCCCEEEE
Confidence 6654455555667876 2 34566555 66899776544
No 94
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=74.23 E-value=7 Score=35.78 Aligned_cols=100 Identities=9% Similarity=0.115 Sum_probs=61.1
Q ss_pred eEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCccccc
Q 043031 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFET 245 (424)
Q Consensus 166 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~~ 245 (424)
=+|+|+|.|.| +|--.++.. .|. .+++| ++- +...++-+.++ |+..|+...+... +..+ ..
T Consensus 51 ~~VLDlGCG~G----plAl~l~~~---~p~-a~~~A-~Di--~~~~leiar~~----~~~~g~~~~v~~~---d~~~-~~ 111 (200)
T 3fzg_A 51 SSILDFGCGFN----PLALYQWNE---NEK-IIYHA-YDI--DRAEIAFLSSI----IGKLKTTIKYRFL---NKES-DV 111 (200)
T ss_dssp SEEEEETCTTH----HHHHHHHCS---SCC-CEEEE-ECS--CHHHHHHHHHH----HHHSCCSSEEEEE---CCHH-HH
T ss_pred CeEEEecCCCC----HHHHHHHhc---CCC-CEEEE-EeC--CHHHHHHHHHH----HHhcCCCccEEEe---cccc-cC
Confidence 37899977754 555555544 353 59999 874 66666666555 5677887555443 2211 12
Q ss_pred CCC--cEEEEeccccccccCCCcchHHHHHHHHHhcCCCeEEEEee
Q 043031 246 NEG--EVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEV 289 (424)
Q Consensus 246 ~~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvl~E~ 289 (424)
.++ +++..+- -||+| ++. .....+.++.|+|..+++.=+
T Consensus 112 ~~~~~DvVLa~k--~LHlL-~~~--~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 112 YKGTYDVVFLLK--MLPVL-KQQ--DVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp TTSEEEEEEEET--CHHHH-HHT--TCCHHHHHHTCEEEEEEEEEE
T ss_pred CCCCcChhhHhh--HHHhh-hhh--HHHHHHHHHHhCCCCEEEEeC
Confidence 222 3333333 36888 432 334568889999998888855
No 95
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=74.01 E-value=39 Score=30.61 Aligned_cols=98 Identities=18% Similarity=0.251 Sum_probs=54.5
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCccc
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDF 243 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l 243 (424)
+.-.|+|+|.|.|. +...|+.+ | .++|| |+. +...++.+.++.. +. |. ..++.++
T Consensus 54 ~~~~vLDiGcG~G~----~~~~l~~~--~----~~v~g-vD~--s~~~l~~a~~~~~------~~---~~---~~d~~~~ 108 (260)
T 2avn_A 54 NPCRVLDLGGGTGK----WSLFLQER--G----FEVVL-VDP--SKEMLEVAREKGV------KN---VV---EAKAEDL 108 (260)
T ss_dssp SCCEEEEETCTTCH----HHHHHHTT--T----CEEEE-EES--CHHHHHHHHHHTC------SC---EE---ECCTTSC
T ss_pred CCCeEEEeCCCcCH----HHHHHHHc--C----CeEEE-EeC--CHHHHHHHHhhcC------CC---EE---ECcHHHC
Confidence 44589999999885 44556655 2 37999 874 6666665554422 11 22 2344444
Q ss_pred ccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEee
Q 043031 244 ETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEV 289 (424)
Q Consensus 244 ~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~ 289 (424)
...++..=+|-+...++|+..+ ...+|+.+ +.|+|.-.+++..
T Consensus 109 ~~~~~~fD~v~~~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 109 PFPSGAFEAVLALGDVLSYVEN---KDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp CSCTTCEEEEEECSSHHHHCSC---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEcchhhhcccc---HHHHHHHHHHHcCCCeEEEEEe
Confidence 4433322222233334555432 45666655 6789986666543
No 96
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=73.79 E-value=7.4 Score=35.96 Aligned_cols=113 Identities=16% Similarity=0.157 Sum_probs=61.3
Q ss_pred CCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHH------------H------
Q 043031 162 SAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANF------------A------ 223 (424)
Q Consensus 162 g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~f------------A------ 223 (424)
..+.-+|+|+|.|.|.. ++ ++...+ .-+||| ++. +...++.+.+++.+. .
T Consensus 53 ~~~g~~vLDiGCG~G~~--~~---~~~~~~----~~~v~g-~D~--s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~ 120 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIY--QV---LAACDS----FQDITL-SDF--TDRNREELEKWLKKEPGAYDWTPAVKFACELEGN 120 (263)
T ss_dssp SCCEEEEEESSCTTCCG--GG---TTGGGT----EEEEEE-EES--CHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTC
T ss_pred CCCCceEEEeCCCccHH--HH---HHHHhh----hcceee-ccc--cHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCC
Confidence 34567899999999852 11 122221 237999 985 777787776665321 0
Q ss_pred --------HhCCCceEEEEEecCCCcc---cc-cCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 224 --------ETINLPFPFNISFLTDIKD---FE-TNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 224 --------~~lgvpFeF~~v~~~~l~~---l~-~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
+.+.-.+ ..+...++.+ +. ...+..=+|-+.+.|||+..+......+|+.| +-|+|.-..+.-
T Consensus 121 ~~~~~~~~~~~~~~i--~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~ 196 (263)
T 2a14_A 121 SGRWEEKEEKLRAAV--KRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTT 196 (263)
T ss_dssp GGGHHHHHHHHHHHE--EEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CcchhhHHHHHHhhh--heEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 0011111 1121223322 11 12334556666677899765444455677766 568997655553
No 97
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=72.96 E-value=19 Score=31.42 Aligned_cols=102 Identities=14% Similarity=0.077 Sum_probs=54.8
Q ss_pred HHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEE
Q 043031 156 VIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNIS 235 (424)
Q Consensus 156 IleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v 235 (424)
+++.+.. +.-.|+|+|.|.|. +...| +- -++|| |+. +...++.+.+++ -++ +|.
T Consensus 29 ~l~~~~~-~~~~vLdiG~G~G~----~~~~l-----~~---~~v~~-vD~--s~~~~~~a~~~~------~~~--~~~-- 82 (211)
T 2gs9_A 29 ALKGLLP-PGESLLEVGAGTGY----WLRRL-----PY---PQKVG-VEP--SEAMLAVGRRRA------PEA--TWV-- 82 (211)
T ss_dssp HHHTTCC-CCSEEEEETCTTCH----HHHHC-----CC---SEEEE-ECC--CHHHHHHHHHHC------TTS--EEE--
T ss_pred HHHHhcC-CCCeEEEECCCCCH----hHHhC-----CC---CeEEE-EeC--CHHHHHHHHHhC------CCc--EEE--
Confidence 4444433 45589999999884 22223 11 27999 875 666666555554 233 232
Q ss_pred ecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 236 FLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 236 ~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
..++.++...++..=+|-+...|||+.+ ...+|+.+ +.|+|.-.+++.
T Consensus 83 -~~d~~~~~~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~ 131 (211)
T 2gs9_A 83 -RAWGEALPFPGESFDVVLLFTTLEFVED----VERVLLEARRVLRPGGALVVG 131 (211)
T ss_dssp -CCCTTSCCSCSSCEEEEEEESCTTTCSC----HHHHHHHHHHHEEEEEEEEEE
T ss_pred -EcccccCCCCCCcEEEEEEcChhhhcCC----HHHHHHHHHHHcCCCCEEEEE
Confidence 1234444433332222233355788753 34566554 678997655543
No 98
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=72.61 E-value=34 Score=29.64 Aligned_cols=107 Identities=11% Similarity=0.171 Sum_probs=60.8
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc-eEEE
Q 043031 155 AVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP-FPFN 233 (424)
Q Consensus 155 aIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp-FeF~ 233 (424)
.+++.+.-.+.-+|+|+|.|.|. +...|+.+ +|. .++|| |+. +...++.+.+++.. .|++ ++|.
T Consensus 31 ~~l~~l~~~~~~~vLDiG~G~G~----~~~~la~~--~~~--~~v~~-vD~--s~~~~~~a~~~~~~----~~~~~v~~~ 95 (204)
T 3e05_A 31 VTLSKLRLQDDLVMWDIGAGSAS----VSIEASNL--MPN--GRIFA-LER--NPQYLGFIRDNLKK----FVARNVTLV 95 (204)
T ss_dssp HHHHHTTCCTTCEEEEETCTTCH----HHHHHHHH--CTT--SEEEE-EEC--CHHHHHHHHHHHHH----HTCTTEEEE
T ss_pred HHHHHcCCCCCCEEEEECCCCCH----HHHHHHHH--CCC--CEEEE-EeC--CHHHHHHHHHHHHH----hCCCcEEEE
Confidence 34555554555689999999886 34455555 332 58999 884 67777766665543 3542 3333
Q ss_pred EEecCCCcc-cc-cCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 234 ISFLTDIKD-FE-TNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 234 ~v~~~~l~~-l~-~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
.- +..+ +. ...=++++++..+ + ....+|+.+ +.|+|.-.+++.
T Consensus 96 ~~---d~~~~~~~~~~~D~i~~~~~~--~-------~~~~~l~~~~~~LkpgG~l~~~ 141 (204)
T 3e05_A 96 EA---FAPEGLDDLPDPDRVFIGGSG--G-------MLEEIIDAVDRRLKSEGVIVLN 141 (204)
T ss_dssp EC---CTTTTCTTSCCCSEEEESCCT--T-------CHHHHHHHHHHHCCTTCEEEEE
T ss_pred eC---ChhhhhhcCCCCCEEEECCCC--c-------CHHHHHHHHHHhcCCCeEEEEE
Confidence 22 2222 21 1222455555443 1 244566555 668998777764
No 99
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=71.04 E-value=16 Score=34.61 Aligned_cols=121 Identities=13% Similarity=0.140 Sum_probs=67.2
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcccc
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFE 244 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~ 244 (424)
--.|+|+|.|.|. |--.+ + |. .+++| ++- +...++ .+.+++...|+++.|..... ....-
T Consensus 106 p~~VLDlGCG~gp----Lal~~--~----~~-~~y~a-~DI--d~~~i~----~ar~~~~~~g~~~~~~v~D~--~~~~~ 165 (253)
T 3frh_A 106 PRRVLDIACGLNP----LALYE--R----GI-ASVWG-CDI--HQGLGD----VITPFAREKDWDFTFALQDV--LCAPP 165 (253)
T ss_dssp CSEEEEETCTTTH----HHHHH--T----TC-SEEEE-EES--BHHHHH----HHHHHHHHTTCEEEEEECCT--TTSCC
T ss_pred CCeEEEecCCccH----HHHHh--c----cC-CeEEE-EeC--CHHHHH----HHHHHHHhcCCCceEEEeec--ccCCC
Confidence 3489999998773 11111 2 32 68999 874 454444 44455677799988877632 11111
Q ss_pred cCCCcEEEEeccccccccCCCcchHHHHHHHHHhcCCCeEEEEee--eCCCCCCchHHHHHHHHHHHHHHHHhh
Q 043031 245 TNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEV--ESNDNLQTFEDRFFGTLFHFGALFDCL 316 (424)
Q Consensus 245 ~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvl~E~--ea~~ns~~F~~RF~eaL~~YsalFDsL 316 (424)
-.+.+++.++-. +|+|-+.. ....++.+..|+|..|++.=+ -.+.-++-+ -..|+..|+..
T Consensus 166 ~~~~DvvLllk~--lh~LE~q~--~~~~~~ll~aL~~~~vvVsfPtksl~Gr~~gm-------~~~Y~~~~e~~ 228 (253)
T 3frh_A 166 AEAGDLALIFKL--LPLLEREQ--AGSAMALLQSLNTPRMAVSFPTRSLGGRGKGM-------EANYAAWFEGG 228 (253)
T ss_dssp CCBCSEEEEESC--HHHHHHHS--TTHHHHHHHHCBCSEEEEEEECC------------------CHHHHHHHH
T ss_pred CCCcchHHHHHH--HHHhhhhc--hhhHHHHHHHhcCCCEEEEcChHHhcCCCcch-------hhHHHHHHHHH
Confidence 124556666644 57774322 235568888999998888766 333333322 23466666654
No 100
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=70.38 E-value=28 Score=30.58 Aligned_cols=102 Identities=19% Similarity=0.202 Sum_probs=59.4
Q ss_pred eEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCC---ceEEEEEecCCCcc
Q 043031 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINL---PFPFNISFLTDIKD 242 (424)
Q Consensus 166 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgv---pFeF~~v~~~~l~~ 242 (424)
-.|+|+|.|.|.- ...++.+ ++ -++|| |+. +...++.+.+++. ..|+ ..+|.. .+..+
T Consensus 55 ~~vLDlGcGtG~~----~~~~~~~--~~---~~v~g-vD~--s~~~l~~a~~~~~----~~~~~~~~v~~~~---~d~~~ 115 (201)
T 2ift_A 55 SECLDGFAGSGSL----GFEALSR--QA---KKVTF-LEL--DKTVANQLKKNLQ----TLKCSSEQAEVIN---QSSLD 115 (201)
T ss_dssp CEEEETTCTTCHH----HHHHHHT--TC---SEEEE-ECS--CHHHHHHHHHHHH----HTTCCTTTEEEEC---SCHHH
T ss_pred CeEEEcCCccCHH----HHHHHHc--cC---CEEEE-EEC--CHHHHHHHHHHHH----HhCCCccceEEEE---CCHHH
Confidence 3799999998842 2223334 22 37999 984 7777776666543 4555 334332 23222
Q ss_pred -cc-c--CC-CcEEEEeccccccccCCCcchHHHHHHHHHh---cCCCeEEEEeeeCCC
Q 043031 243 -FE-T--NE-GEVVAVYSPVHLSHMIRKPNCLETFLTELRK---INPCVMVVIEVESND 293 (424)
Q Consensus 243 -l~-~--~~-~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~---L~P~vvvl~E~ea~~ 293 (424)
+. . .. =++++.|.++ | ....+.+++.+.+ |+|.-+++++.....
T Consensus 116 ~~~~~~~~~~fD~I~~~~~~--~-----~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 116 FLKQPQNQPHFDVVFLDPPF--H-----FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp HTTSCCSSCCEEEEEECCCS--S-----SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred HHHhhccCCCCCEEEECCCC--C-----CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 11 1 12 2456666663 2 1335678888865 999988888766554
No 101
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=70.34 E-value=5.9 Score=35.72 Aligned_cols=100 Identities=16% Similarity=0.152 Sum_probs=55.6
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcccc
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFE 244 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~ 244 (424)
.-.|+|+|.|.|. +...|+.+ ++ ++|| |+. +...++.+.+++ .. -..+|... ++.++.
T Consensus 57 ~~~vLD~GcG~G~----~~~~la~~--~~----~v~g-vD~--s~~~~~~a~~~~----~~--~~~~~~~~---d~~~~~ 114 (245)
T 3ggd_A 57 ELPLIDFACGNGT----QTKFLSQF--FP----RVIG-LDV--SKSALEIAAKEN----TA--ANISYRLL---DGLVPE 114 (245)
T ss_dssp TSCEEEETCTTSH----HHHHHHHH--SS----CEEE-EES--CHHHHHHHHHHS----CC--TTEEEEEC---CTTCHH
T ss_pred CCeEEEEcCCCCH----HHHHHHHh--CC----CEEE-EEC--CHHHHHHHHHhC----cc--cCceEEEC---cccccc
Confidence 3469999999884 55566665 32 6899 875 666666665554 11 13444333 333311
Q ss_pred ----cC---CCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeE-EEEeee
Q 043031 245 ----TN---EGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVM-VVIEVE 290 (424)
Q Consensus 245 ----~~---~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vv-vl~E~e 290 (424)
.. ..++|+.+ ..+||+.. .....+|+.+ +.|+|.-. ++++..
T Consensus 115 ~~~~~~~~~~~d~v~~~--~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 115 QAAQIHSEIGDANIYMR--TGFHHIPV--EKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp HHHHHHHHHCSCEEEEE--SSSTTSCG--GGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred cccccccccCccEEEEc--chhhcCCH--HHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 11 12244333 44677742 3355666655 66899764 555653
No 102
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=70.16 E-value=43 Score=27.83 Aligned_cols=102 Identities=16% Similarity=0.108 Sum_probs=57.3
Q ss_pred HHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEE
Q 043031 156 VIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNIS 235 (424)
Q Consensus 156 IleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v 235 (424)
+++.+.-.+.-.|+|+|.|.|. +...|+.+. . ++|| |+. +...++.+.++ .-..+|..
T Consensus 9 ~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~-----~-~v~~-vD~--s~~~~~~a~~~--------~~~v~~~~- 66 (170)
T 3i9f_A 9 YLPNIFEGKKGVIVDYGCGNGF----YCKYLLEFA-----T-KLYC-IDI--NVIALKEVKEK--------FDSVITLS- 66 (170)
T ss_dssp THHHHHSSCCEEEEEETCTTCT----THHHHHTTE-----E-EEEE-ECS--CHHHHHHHHHH--------CTTSEEES-
T ss_pred HHHhcCcCCCCeEEEECCCCCH----HHHHHHhhc-----C-eEEE-EeC--CHHHHHHHHHh--------CCCcEEEe-
Confidence 4444544566789999999987 445565552 2 7999 875 66666665555 11222221
Q ss_pred ecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 236 FLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 236 ~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
.+ +...++..=+|-+...+||+.+ ...+|+.+ +.|+|.-.+++.
T Consensus 67 --~d---~~~~~~~~D~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~ 111 (170)
T 3i9f_A 67 --DP---KEIPDNSVDFILFANSFHDMDD----KQHVISEVKRILKDDGRVIII 111 (170)
T ss_dssp --SG---GGSCTTCEEEEEEESCSTTCSC----HHHHHHHHHHHEEEEEEEEEE
T ss_pred --CC---CCCCCCceEEEEEccchhcccC----HHHHHHHHHHhcCCCCEEEEE
Confidence 12 2233332323334455788743 34556544 778996655553
No 103
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=70.03 E-value=38 Score=33.17 Aligned_cols=115 Identities=13% Similarity=0.142 Sum_probs=64.8
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFN 233 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~ 233 (424)
++|++...-.+.-.|+|+|.|.| .+...++.+ |. -++|| |+. + ..++.+.+ .++..|++=...
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG----~ls~~la~~--g~---~~V~g-vD~--s-~~~~~a~~----~~~~~~~~~~v~ 115 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSG----ILAIWSAQA--GA---RKVYA-VEA--T-KMADHARA----LVKANNLDHIVE 115 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTT----HHHHHHHHT--TC---SEEEE-EES--S-TTHHHHHH----HHHHTTCTTTEE
T ss_pred HHHHhccccCCCCEEEEeccCcC----HHHHHHHhc--CC---CEEEE-Ecc--H-HHHHHHHH----HHHHcCCCCeEE
Confidence 44555444445568999999999 344556655 32 28999 985 4 44544433 345566652222
Q ss_pred EEecCCCcccccC-CCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEee
Q 043031 234 ISFLTDIKDFETN-EGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEV 289 (424)
Q Consensus 234 ~v~~~~l~~l~~~-~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~ 289 (424)
.+. .++.++... .=++|+.|.+ .|.+ .....++.+|+.+ +-|+|.-+++...
T Consensus 116 ~~~-~d~~~~~~~~~~D~Iv~~~~--~~~l-~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 116 VIE-GSVEDISLPEKVDVIISEWM--GYFL-LRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp EEE-SCGGGCCCSSCEEEEEECCC--BTTB-TTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred EEE-CchhhcCcCCcceEEEEcCh--hhcc-cchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 232 244443332 1234444442 2333 3334577888887 8899988776643
No 104
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=68.60 E-value=26 Score=30.80 Aligned_cols=103 Identities=10% Similarity=0.069 Sum_probs=55.3
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHH-----H----hCCCceEEEE
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFA-----E----TINLPFPFNI 234 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA-----~----~lgvpFeF~~ 234 (424)
+.-+|+|+|.|.|. +...||.+ | .++|| |+. +...++.+.++...-. . ..+-..+|..
T Consensus 22 ~~~~vLD~GCG~G~----~~~~la~~--g----~~V~g-vD~--S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 88 (203)
T 1pjz_A 22 PGARVLVPLCGKSQ----DMSWLSGQ--G----YHVVG-AEL--SEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWC 88 (203)
T ss_dssp TTCEEEETTTCCSH----HHHHHHHH--C----CEEEE-EEE--CHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEE
T ss_pred CCCEEEEeCCCCcH----hHHHHHHC--C----CeEEE-EeC--CHHHHHHHHHHccCCcccccccccccccCCccEEEE
Confidence 34579999998884 34457765 2 37999 985 7777776655431100 0 0012233433
Q ss_pred EecCCCcccccCC-CcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeE
Q 043031 235 SFLTDIKDFETNE-GEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVM 284 (424)
Q Consensus 235 v~~~~l~~l~~~~-~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vv 284 (424)
- ++.++...+ +..=+|.+...|||+.. ..+..+++.+ |-|+|.-.
T Consensus 89 ~---d~~~l~~~~~~~fD~v~~~~~l~~l~~--~~~~~~l~~~~r~LkpgG~ 135 (203)
T 1pjz_A 89 G---DFFALTARDIGHCAAFYDRAAMIALPA--DMRERYVQHLEALMPQACS 135 (203)
T ss_dssp E---CCSSSTHHHHHSEEEEEEESCGGGSCH--HHHHHHHHHHHHHSCSEEE
T ss_pred C---ccccCCcccCCCEEEEEECcchhhCCH--HHHHHHHHHHHHHcCCCcE
Confidence 2 333332221 22223334445788742 3456677766 56899854
No 105
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=67.28 E-value=15 Score=32.30 Aligned_cols=18 Identities=6% Similarity=0.222 Sum_probs=14.5
Q ss_pred ChhhHHHHHhcCCCcccc
Q 043031 356 KIDGWRDLFNRFGLVEAE 373 (424)
Q Consensus 356 ~~~~W~~r~~~aGF~~~~ 373 (424)
+.+.|...++++||..+.
T Consensus 158 ~~~~~~~~l~~~Gf~~~~ 175 (215)
T 2zfu_A 158 DVRTFLRAVTKLGFKIVS 175 (215)
T ss_dssp CHHHHHHHHHHTTEEEEE
T ss_pred CHHHHHHHHHHCCCEEEE
Confidence 557888999999998655
No 106
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=67.01 E-value=4.8 Score=38.01 Aligned_cols=57 Identities=9% Similarity=0.271 Sum_probs=35.8
Q ss_pred HHHhhhcCC--CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHH
Q 043031 155 AVIENVSSA--KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANF 222 (424)
Q Consensus 155 aIleA~~g~--~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~f 222 (424)
.+++.+... +.-.|+|+|.|.| .+...|+.+- |+ .+||| |+. +...++.+.+++...
T Consensus 35 ~~l~~l~~~~~~~~~VLDiGCG~G----~~~~~la~~~--~~--~~v~g-vDi--s~~~i~~A~~~~~~~ 93 (292)
T 3g07_A 35 GRLRVLKPEWFRGRDVLDLGCNVG----HLTLSIACKW--GP--SRMVG-LDI--DSRLIHSARQNIRHY 93 (292)
T ss_dssp GGGGTSCGGGTTTSEEEEESCTTC----HHHHHHHHHT--CC--SEEEE-EES--CHHHHHHHHHTC---
T ss_pred HHHHhhhhhhcCCCcEEEeCCCCC----HHHHHHHHHc--CC--CEEEE-ECC--CHHHHHHHHHHHHhh
Confidence 344444332 4458999999999 4555666663 22 48999 985 677777777766544
No 107
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=65.80 E-value=35 Score=28.68 Aligned_cols=108 Identities=16% Similarity=0.206 Sum_probs=62.0
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcc-c
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKD-F 243 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~-l 243 (424)
.-.|+|+|.|.|. +...++.+ + . -++|| |+. +...++.+.+++ +..|++=..+.+. .+..+ +
T Consensus 32 ~~~vLDlGcG~G~----~~~~l~~~--~-~--~~v~~-vD~--~~~~~~~a~~~~----~~~~~~~~~~~~~-~d~~~~~ 94 (177)
T 2esr_A 32 GGRVLDLFAGSGG----LAIEAVSR--G-M--SAAVL-VEK--NRKAQAIIQDNI----IMTKAENRFTLLK-MEAERAI 94 (177)
T ss_dssp SCEEEEETCTTCH----HHHHHHHT--T-C--CEEEE-ECC--CHHHHHHHHHHH----HTTTCGGGEEEEC-SCHHHHH
T ss_pred CCeEEEeCCCCCH----HHHHHHHc--C-C--CEEEE-EEC--CHHHHHHHHHHH----HHcCCCCceEEEE-CcHHHhH
Confidence 3479999999885 33445555 1 1 48999 884 666666665543 4556642223332 23322 2
Q ss_pred ccCCC--cEEEEeccccccccCCCcchHHHHHHHH---HhcCCCeEEEEeeeCCCCCC
Q 043031 244 ETNEG--EVVAVYSPVHLSHMIRKPNCLETFLTEL---RKINPCVMVVIEVESNDNLQ 296 (424)
Q Consensus 244 ~~~~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~i---r~L~P~vvvl~E~ea~~ns~ 296 (424)
...++ +.++.|.++.. ...+.+++.+ +.|+|.-+++++.......+
T Consensus 95 ~~~~~~fD~i~~~~~~~~-------~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~~~ 145 (177)
T 2esr_A 95 DCLTGRFDLVFLDPPYAK-------ETIVATIEALAAKNLLSEQVMVVCETDKTVLLP 145 (177)
T ss_dssp HHBCSCEEEEEECCSSHH-------HHHHHHHHHHHHTTCEEEEEEEEEEEETTCCCC
T ss_pred HhhcCCCCEEEECCCCCc-------chHHHHHHHHHhCCCcCCCcEEEEEECCccccc
Confidence 11112 46666765421 1234566666 67899988888877655433
No 108
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=65.60 E-value=18 Score=32.18 Aligned_cols=41 Identities=5% Similarity=0.096 Sum_probs=29.3
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHH
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENR 218 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~r 218 (424)
.-+|+|+|.|.|. +...|+.+ | .++|| |+. +...++.+.++
T Consensus 49 ~~~vLDiGcG~G~----~~~~l~~~--~----~~v~~-vD~--s~~~~~~a~~~ 89 (226)
T 3m33_A 49 QTRVLEAGCGHGP----DAARFGPQ--A----ARWAA-YDF--SPELLKLARAN 89 (226)
T ss_dssp TCEEEEESCTTSH----HHHHHGGG--S----SEEEE-EES--CHHHHHHHHHH
T ss_pred CCeEEEeCCCCCH----HHHHHHHc--C----CEEEE-EEC--CHHHHHHHHHh
Confidence 3579999999986 56667766 2 37999 885 66666665555
No 109
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=63.61 E-value=72 Score=27.88 Aligned_cols=100 Identities=16% Similarity=0.255 Sum_probs=57.2
Q ss_pred CCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcc
Q 043031 163 AKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKD 242 (424)
Q Consensus 163 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~ 242 (424)
.+.-.|+|+|.|.|. +...|+.+ ++ ++|| |+. +...++.+.+++ -+ .+|... ++.+
T Consensus 39 ~~~~~vLdiG~G~G~----~~~~l~~~--~~----~v~~-~D~--s~~~~~~a~~~~------~~--~~~~~~---d~~~ 94 (239)
T 3bxo_A 39 PEASSLLDVACGTGT----HLEHFTKE--FG----DTAG-LEL--SEDMLTHARKRL------PD--ATLHQG---DMRD 94 (239)
T ss_dssp TTCCEEEEETCTTSH----HHHHHHHH--HS----EEEE-EES--CHHHHHHHHHHC------TT--CEEEEC---CTTT
T ss_pred CCCCeEEEecccCCH----HHHHHHHh--CC----cEEE-EeC--CHHHHHHHHHhC------CC--CEEEEC---CHHH
Confidence 344689999999885 34455554 22 6999 874 666666555442 12 333332 3333
Q ss_pred cccCCCc-EEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 243 FETNEGE-VVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 243 l~~~~~E-~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
+.. ++. -+|+.+.-.+||+.+ +.....+|+.+ +.|+|.-.++++
T Consensus 95 ~~~-~~~~D~v~~~~~~~~~~~~-~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 95 FRL-GRKFSAVVSMFSSVGYLKT-TEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp CCC-SSCEEEEEECTTGGGGCCS-HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred ccc-CCCCcEEEEcCchHhhcCC-HHHHHHHHHHHHHhcCCCeEEEEE
Confidence 333 222 244433336788754 23345666665 677998877775
No 110
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=63.46 E-value=61 Score=29.81 Aligned_cols=105 Identities=10% Similarity=0.082 Sum_probs=58.7
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHH-H------H-H------hCCCc
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLAN-F------A-E------TINLP 229 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~-f------A-~------~lgvp 229 (424)
+.-.|+|+|.|.|. +...||.+ | .++|| |+. +...++.+.++... + + . ..+..
T Consensus 68 ~~~~vLD~GCG~G~----~~~~La~~--G----~~V~g-vD~--S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (252)
T 2gb4_A 68 SGLRVFFPLCGKAI----EMKWFADR--G----HTVVG-VEI--SEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGS 134 (252)
T ss_dssp CSCEEEETTCTTCT----HHHHHHHT--T----CEEEE-ECS--CHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSS
T ss_pred CCCeEEEeCCCCcH----HHHHHHHC--C----CeEEE-EEC--CHHHHHHHHHhcccccccccccccccccccccCCCc
Confidence 44689999999885 45567776 3 37999 985 66666655333210 0 0 0 01123
Q ss_pred eEEEEEecCCCcccccCC-CcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEE
Q 043031 230 FPFNISFLTDIKDFETNE-GEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVV 286 (424)
Q Consensus 230 FeF~~v~~~~l~~l~~~~-~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl 286 (424)
.+|.. .++.++.... +..=+|-+...||++. +..+..+++.+ +-|+|.-..+
T Consensus 135 i~~~~---~D~~~l~~~~~~~FD~V~~~~~l~~l~--~~~~~~~l~~~~~~LkpGG~l~ 188 (252)
T 2gb4_A 135 ISLYC---CSIFDLPRANIGKFDRIWDRGALVAIN--PGDHDRYADIILSLLRKEFQYL 188 (252)
T ss_dssp EEEEE---SCTTTGGGGCCCCEEEEEESSSTTTSC--GGGHHHHHHHHHHTEEEEEEEE
T ss_pred eEEEE---CccccCCcccCCCEEEEEEhhhhhhCC--HHHHHHHHHHHHHHcCCCeEEE
Confidence 33332 2444443322 4333444455678884 24466777766 5689976553
No 111
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=62.46 E-value=73 Score=27.18 Aligned_cols=98 Identities=16% Similarity=0.212 Sum_probs=55.8
Q ss_pred EEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcccccC
Q 043031 167 HIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFETN 246 (424)
Q Consensus 167 HIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~~~ 246 (424)
.|+|+|.|.|. +...|+.+ | .++|| |+. +...++.+.+++.. .|+..+|... ++.++...
T Consensus 32 ~vLdiGcG~G~----~~~~l~~~--~----~~v~~-vD~--s~~~~~~a~~~~~~----~~~~~~~~~~---d~~~~~~~ 91 (202)
T 2kw5_A 32 KILCLAEGEGR----NACFLASL--G----YEVTA-VDQ--SSVGLAKAKQLAQE----KGVKITTVQS---NLADFDIV 91 (202)
T ss_dssp EEEECCCSCTH----HHHHHHTT--T----CEEEE-ECS--SHHHHHHHHHHHHH----HTCCEEEECC---BTTTBSCC
T ss_pred CEEEECCCCCH----hHHHHHhC--C----CeEEE-EEC--CHHHHHHHHHHHHh----cCCceEEEEc---ChhhcCCC
Confidence 89999998875 34556655 2 38999 874 66667666655543 3444444433 33333322
Q ss_pred CC--cEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEeee
Q 043031 247 EG--EVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEVE 290 (424)
Q Consensus 247 ~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~e 290 (424)
++ +.++.+ +.|+ .......+|+.+ +.|+|.-.+++..-
T Consensus 92 ~~~fD~v~~~----~~~~--~~~~~~~~l~~~~~~L~pgG~l~~~~~ 132 (202)
T 2kw5_A 92 ADAWEGIVSI----FCHL--PSSLRQQLYPKVYQGLKPGGVFILEGF 132 (202)
T ss_dssp TTTCSEEEEE----CCCC--CHHHHHHHHHHHHTTCCSSEEEEEEEE
T ss_pred cCCccEEEEE----hhcC--CHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 22 344443 2333 223355666665 66799877666543
No 112
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=62.20 E-value=9.5 Score=39.85 Aligned_cols=105 Identities=13% Similarity=0.251 Sum_probs=61.6
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCC-CceEEEEEecCCCcc
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETIN-LPFPFNISFLTDIKD 242 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lg-vpFeF~~v~~~~l~~ 242 (424)
+.+.|+|+|.|-|. |-..||.+ | -++|| |+. +...++.+. ..|+.-| +..+|.....+++.+
T Consensus 66 ~~~~vLDvGCG~G~----~~~~la~~--g----a~V~g-iD~--~~~~i~~a~----~~a~~~~~~~~~~~~~~~~~~~~ 128 (569)
T 4azs_A 66 RPLNVLDLGCAQGF----FSLSLASK--G----ATIVG-IDF--QQENINVCR----ALAEENPDFAAEFRVGRIEEVIA 128 (569)
T ss_dssp SCCEEEEETCTTSH----HHHHHHHT--T----CEEEE-EES--CHHHHHHHH----HHHHTSTTSEEEEEECCHHHHHH
T ss_pred CCCeEEEECCCCcH----HHHHHHhC--C----CEEEE-ECC--CHHHHHHHH----HHHHhcCCCceEEEECCHHHHhh
Confidence 34789999999885 77788876 3 26999 985 666665553 3455555 677787664433211
Q ss_pred cccCCCcEEEEeccccccccCCCcchHHHHHHHHHhcC--CCeEEEE
Q 043031 243 FETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKIN--PCVMVVI 287 (424)
Q Consensus 243 l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~--P~vvvl~ 287 (424)
...++..=+|-|+--|||+.+ +.......+.++.+| |+.++++
T Consensus 129 -~~~~~~fD~v~~~e~~ehv~~-~~~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 129 -ALEEGEFDLAIGLSVFHHIVH-LHGIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp -HCCTTSCSEEEEESCHHHHHH-HHCHHHHHHHHHHHHHHSSEEEEE
T ss_pred -hccCCCccEEEECcchhcCCC-HHHHHHHHHHHHHhccccceeeEE
Confidence 123343435556667899865 333333334444443 3444444
No 113
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=61.91 E-value=44 Score=28.26 Aligned_cols=102 Identities=13% Similarity=0.171 Sum_probs=53.9
Q ss_pred eEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCC-ceEEEEEecCCCcccc
Q 043031 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINL-PFPFNISFLTDIKDFE 244 (424)
Q Consensus 166 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgv-pFeF~~v~~~~l~~l~ 244 (424)
-+|+|+|.|.|. +...|+.+ + -++|| |+. +...++.+.+++.+ .|+ ..+|.. .+..++.
T Consensus 24 ~~vLDiGcG~G~----~~~~la~~-~-----~~v~~-vD~--s~~~l~~a~~~~~~----~~~~~v~~~~---~~~~~l~ 83 (185)
T 3mti_A 24 SIVVDATMGNGN----DTAFLAGL-S-----KKVYA-FDV--QEQALGKTSQRLSD----LGIENTELIL---DGHENLD 83 (185)
T ss_dssp CEEEESCCTTSH----HHHHHHTT-S-----SEEEE-EES--CHHHHHHHHHHHHH----HTCCCEEEEE---SCGGGGG
T ss_pred CEEEEEcCCCCH----HHHHHHHh-C-----CEEEE-EEC--CHHHHHHHHHHHHH----cCCCcEEEEe---CcHHHHH
Confidence 368999999885 33446665 1 47999 984 77777777666543 344 244433 2333321
Q ss_pred -cCCC--cEEEEeccccccc----cCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 245 -TNEG--EVVAVYSPVHLSH----MIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 245 -~~~~--E~laVN~~~~Lh~----l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
..++ ++++.|..+ +++ +...+.....+|+.+ +.|+|.-.+++.
T Consensus 84 ~~~~~~fD~v~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 84 HYVREPIRAAIFNLGY-LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp GTCCSCEEEEEEEEC------------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhccCCcCEEEEeCCC-CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 1122 355555422 221 111223334455544 779997666554
No 114
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=61.87 E-value=16 Score=33.87 Aligned_cols=45 Identities=16% Similarity=0.126 Sum_probs=29.9
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHH
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLA 220 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~ 220 (424)
+.-+|+|+|.|.|. +..+ +.+. +. -+||| |+. +...++.+.+++.
T Consensus 71 ~~~~vLDiGcG~G~-~~~l----~~~~--~~--~~v~g-vD~--s~~~l~~a~~~~~ 115 (289)
T 2g72_A 71 SGRTLIDIGSGPTV-YQLL----SACS--HF--EDITM-TDF--LEVNRQELGRWLQ 115 (289)
T ss_dssp CCSEEEEETCTTCC-GGGT----TGGG--GC--SEEEE-ECS--CHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcCh-HHHH----hhcc--CC--CeEEE-eCC--CHHHHHHHHHHHh
Confidence 44689999999998 5432 2222 12 38999 985 7777777766553
No 115
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=60.80 E-value=79 Score=31.11 Aligned_cols=105 Identities=14% Similarity=0.159 Sum_probs=62.3
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCccc
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDF 243 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l 243 (424)
+.-+|+|+|.|.|.- ...|+.+ + .++|| |+. +...++.+.+++ +..|+..+|..- +..++
T Consensus 233 ~~~~VLDlGcG~G~~----~~~la~~--g----~~V~g-vDi--s~~al~~A~~n~----~~~~~~v~~~~~---D~~~~ 292 (381)
T 3dmg_A 233 RGRQVLDLGAGYGAL----TLPLARM--G----AEVVG-VED--DLASVLSLQKGL----EANALKAQALHS---DVDEA 292 (381)
T ss_dssp TTCEEEEETCTTSTT----HHHHHHT--T----CEEEE-EES--BHHHHHHHHHHH----HHTTCCCEEEEC---STTTT
T ss_pred CCCEEEEEeeeCCHH----HHHHHHc--C----CEEEE-EEC--CHHHHHHHHHHH----HHcCCCeEEEEc---chhhc
Confidence 445899999999963 3445555 2 38999 874 677777666654 345666555433 33332
Q ss_pred ccC--CCcEEEEeccccccccCCC-cchHHHHHH-HHHhcCCCeEEEEeee
Q 043031 244 ETN--EGEVVAVYSPVHLSHMIRK-PNCLETFLT-ELRKINPCVMVVIEVE 290 (424)
Q Consensus 244 ~~~--~~E~laVN~~~~Lh~l~~~-~~~~~~~L~-~ir~L~P~vvvl~E~e 290 (424)
... .=+.|+.|.+| |+-... ......+++ ..+.|+|.-.+++..+
T Consensus 293 ~~~~~~fD~Ii~npp~--~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n 341 (381)
T 3dmg_A 293 LTEEARFDIIVTNPPF--HVGGAVILDVAQAFVNVAAARLRPGGVFFLVSN 341 (381)
T ss_dssp SCTTCCEEEEEECCCC--CTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cccCCCeEEEEECCch--hhcccccHHHHHHHHHHHHHhcCcCcEEEEEEc
Confidence 111 22467777665 442221 233445665 4577899887777644
No 116
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=60.42 E-value=18 Score=31.78 Aligned_cols=102 Identities=14% Similarity=0.186 Sum_probs=58.7
Q ss_pred eEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCC-ceEEEEEecCCCcc-c
Q 043031 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINL-PFPFNISFLTDIKD-F 243 (424)
Q Consensus 166 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgv-pFeF~~v~~~~l~~-l 243 (424)
-+|+|+|.|.|.--. .++.+ +. -+||| |+. +...++.+.+++ +..|+ ..+|.. .+..+ +
T Consensus 56 ~~vLDlgcG~G~~~~----~l~~~--~~---~~V~~-vD~--s~~~l~~a~~~~----~~~~~~~v~~~~---~D~~~~~ 116 (202)
T 2fpo_A 56 AQCLDCFAGSGALGL----EALSR--YA---AGATL-IEM--DRAVSQQLIKNL----ATLKAGNARVVN---SNAMSFL 116 (202)
T ss_dssp CEEEETTCTTCHHHH----HHHHT--TC---SEEEE-ECS--CHHHHHHHHHHH----HHTTCCSEEEEC---SCHHHHH
T ss_pred CeEEEeCCCcCHHHH----HHHhc--CC---CEEEE-EEC--CHHHHHHHHHHH----HHcCCCcEEEEE---CCHHHHH
Confidence 479999999885322 23333 22 27999 984 677777666554 34455 333322 23322 2
Q ss_pred ccCCC--cEEEEeccccccccCCCcchHHHHHHHHHh---cCCCeEEEEeeeCCC
Q 043031 244 ETNEG--EVVAVYSPVHLSHMIRKPNCLETFLTELRK---INPCVMVVIEVESND 293 (424)
Q Consensus 244 ~~~~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~---L~P~vvvl~E~ea~~ 293 (424)
...++ +.|++|.+|. . .....+++.+++ |+|.-+++++.....
T Consensus 117 ~~~~~~fD~V~~~~p~~---~----~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~ 164 (202)
T 2fpo_A 117 AQKGTPHNIVFVDPPFR---R----GLLEETINLLEDNGWLADEALIYVESEVEN 164 (202)
T ss_dssp SSCCCCEEEEEECCSSS---T----TTHHHHHHHHHHTTCEEEEEEEEEEEEGGG
T ss_pred hhcCCCCCEEEECCCCC---C----CcHHHHHHHHHhcCccCCCcEEEEEECCCc
Confidence 21111 4666666642 1 234567887776 999988887766543
No 117
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=60.40 E-value=20 Score=31.76 Aligned_cols=110 Identities=9% Similarity=0.043 Sum_probs=58.8
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--eEEEEEecCC-Cc
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--FPFNISFLTD-IK 241 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--FeF~~v~~~~-l~ 241 (424)
.-+|+|+|.+.|.- -..||.+- +|. -++|+ |+. +...++.+.+++. ..|+. .+|..-...+ +.
T Consensus 59 ~~~vLdiG~G~G~~----~~~la~~~--~~~-~~v~~-vD~--~~~~~~~a~~~~~----~~~~~~~v~~~~~d~~~~l~ 124 (221)
T 3u81_A 59 PSLVLELGAYCGYS----AVRMARLL--QPG-ARLLT-MEI--NPDCAAITQQMLN----FAGLQDKVTILNGASQDLIP 124 (221)
T ss_dssp CSEEEEECCTTSHH----HHHHHTTS--CTT-CEEEE-EES--CHHHHHHHHHHHH----HHTCGGGEEEEESCHHHHGG
T ss_pred CCEEEEECCCCCHH----HHHHHHhC--CCC-CEEEE-EeC--ChHHHHHHHHHHH----HcCCCCceEEEECCHHHHHH
Confidence 34799999998852 33344432 232 58999 874 6666666655543 34553 4443321111 11
Q ss_pred cccc----CCCcEEEEeccccccccCCCcchHHHHHHHHHhcCCCeEEEEeeeCCCC
Q 043031 242 DFET----NEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEVESNDN 294 (424)
Q Consensus 242 ~l~~----~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvl~E~ea~~n 294 (424)
.+.- ..=+.|.++... ++.. ....++..++.|+|.-+++++.-...+
T Consensus 125 ~~~~~~~~~~fD~V~~d~~~--~~~~----~~~~~~~~~~~LkpgG~lv~~~~~~~~ 175 (221)
T 3u81_A 125 QLKKKYDVDTLDMVFLDHWK--DRYL----PDTLLLEKCGLLRKGTVLLADNVIVPG 175 (221)
T ss_dssp GTTTTSCCCCCSEEEECSCG--GGHH----HHHHHHHHTTCCCTTCEEEESCCCCCC
T ss_pred HHHHhcCCCceEEEEEcCCc--ccch----HHHHHHHhccccCCCeEEEEeCCCCcc
Confidence 1210 222466665432 2221 122456555899999988886544444
No 118
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=58.32 E-value=81 Score=30.03 Aligned_cols=103 Identities=11% Similarity=0.053 Sum_probs=55.5
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcccc
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFE 244 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~ 244 (424)
.-+|+|+|.|.|. +...++.+ | . -+++| |+. + ..++.+.++ ++..|++=....+. .++.++.
T Consensus 39 ~~~VLDiGcGtG~----ls~~la~~--g-~--~~v~~-vD~--s-~~~~~a~~~----~~~~~~~~~i~~~~-~d~~~~~ 100 (328)
T 1g6q_1 39 DKIVLDVGCGTGI----LSMFAAKH--G-A--KHVIG-VDM--S-SIIEMAKEL----VELNGFSDKITLLR-GKLEDVH 100 (328)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT--C-C--SEEEE-EES--S-THHHHHHHH----HHHTTCTTTEEEEE-SCTTTSC
T ss_pred CCEEEEecCccHH----HHHHHHHC--C-C--CEEEE-ECh--H-HHHHHHHHH----HHHcCCCCCEEEEE-Cchhhcc
Confidence 3489999999984 34455554 2 1 38999 885 3 344444333 34455542222232 2444433
Q ss_pred cCCC--cEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 245 TNEG--EVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 245 ~~~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
..++ ++++.+.+ .+.+.. ....+.+|+.+ +-|+|.-.++.+
T Consensus 101 ~~~~~~D~Ivs~~~--~~~l~~-~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 101 LPFPKVDIIISEWM--GYFLLY-ESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp CSSSCEEEEEECCC--BTTBST-TCCHHHHHHHHHHHEEEEEEEESC
T ss_pred CCCCcccEEEEeCc--hhhccc-HHHHHHHHHHHHhhcCCCeEEEEe
Confidence 3222 34444433 233332 23456777766 678998777643
No 119
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=58.27 E-value=30 Score=29.77 Aligned_cols=104 Identities=14% Similarity=0.178 Sum_probs=55.3
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCccc
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDF 243 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l 243 (424)
+.-+|+|+|.|.|. +...|+.+ |+. ++|| ++. +...++.+.+++.. .-.++|... +..++
T Consensus 42 ~~~~vLdiGcG~G~----~~~~l~~~--~~~---~v~~-~D~--s~~~~~~a~~~~~~-----~~~i~~~~~---d~~~~ 101 (215)
T 2pxx_A 42 PEDRILVLGCGNSA----LSYELFLG--GFP---NVTS-VDY--SSVVVAAMQACYAH-----VPQLRWETM---DVRKL 101 (215)
T ss_dssp TTCCEEEETCTTCS----HHHHHHHT--TCC---CEEE-EES--CHHHHHHHHHHTTT-----CTTCEEEEC---CTTSC
T ss_pred CCCeEEEECCCCcH----HHHHHHHc--CCC---cEEE-EeC--CHHHHHHHHHhccc-----CCCcEEEEc---chhcC
Confidence 34579999999885 34455555 332 6999 874 66667666665432 112333322 33334
Q ss_pred ccCCCcEEEEeccccccccCCC-----------cchHHHHHHHH-HhcCCCeEEEE
Q 043031 244 ETNEGEVVAVYSPVHLSHMIRK-----------PNCLETFLTEL-RKINPCVMVVI 287 (424)
Q Consensus 244 ~~~~~E~laVN~~~~Lh~l~~~-----------~~~~~~~L~~i-r~L~P~vvvl~ 287 (424)
...++..=+|-+...+|++... ......+|+.+ +.|+|.-.+++
T Consensus 102 ~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 157 (215)
T 2pxx_A 102 DFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFIS 157 (215)
T ss_dssp CSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEE
Confidence 3434433233333345665411 12234566554 67899765555
No 120
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=57.96 E-value=48 Score=32.00 Aligned_cols=114 Identities=12% Similarity=0.088 Sum_probs=64.0
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--eE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--FP 231 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--Fe 231 (424)
++|++...-.+.-.|+|+|.|.|. +...|+.+ | .-++|| |+. + ..++.+.++ ++..|++ .+
T Consensus 56 ~~i~~~~~~~~~~~VLDvGcG~G~----~~~~la~~--g---~~~v~g-vD~--s-~~l~~a~~~----~~~~~~~~~v~ 118 (349)
T 3q7e_A 56 NSMFHNRHLFKDKVVLDVGSGTGI----LCMFAAKA--G---ARKVIG-IEC--S-SISDYAVKI----VKANKLDHVVT 118 (349)
T ss_dssp HHHHTCHHHHTTCEEEEESCTTSH----HHHHHHHT--T---CSEEEE-EEC--S-THHHHHHHH----HHHTTCTTTEE
T ss_pred HHHHhccccCCCCEEEEEeccchH----HHHHHHHC--C---CCEEEE-ECc--H-HHHHHHHHH----HHHcCCCCcEE
Confidence 345443322233469999999994 45556665 2 248999 985 4 355444443 4455665 44
Q ss_pred EEEEecCCCcccccCCC--cEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEeee
Q 043031 232 FNISFLTDIKDFETNEG--EVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEVE 290 (424)
Q Consensus 232 F~~v~~~~l~~l~~~~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~e 290 (424)
|..- ++.++....+ ++|+.|.+. +.+.. ....+.+|+.+ |-|+|.-+++.+..
T Consensus 119 ~~~~---d~~~~~~~~~~fD~Iis~~~~--~~l~~-~~~~~~~l~~~~r~LkpgG~li~~~~ 174 (349)
T 3q7e_A 119 IIKG---KVEEVELPVEKVDIIISEWMG--YCLFY-ESMLNTVLHARDKWLAPDGLIFPDRA 174 (349)
T ss_dssp EEES---CTTTCCCSSSCEEEEEECCCB--BTBTB-TCCHHHHHHHHHHHEEEEEEEESCEE
T ss_pred EEEC---cHHHccCCCCceEEEEEcccc--ccccC-chhHHHHHHHHHHhCCCCCEEccccc
Confidence 4433 4444333223 345444432 22322 34467888877 77999988775443
No 121
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=57.36 E-value=28 Score=31.20 Aligned_cols=46 Identities=17% Similarity=0.125 Sum_probs=30.0
Q ss_pred CCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHH
Q 043031 162 SAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRL 219 (424)
Q Consensus 162 g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL 219 (424)
..+.-.|+|+|.|.|.-= ..|+.+ ++ -++|| |+. +...++.+.+++
T Consensus 54 ~~~~~~vLDlGcG~G~~~----~~l~~~--~~---~~v~g-vD~--s~~~l~~a~~~~ 99 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQ----LLSACE--SF---TEIIV-SDY--TDQNLWELQKWL 99 (265)
T ss_dssp SCCEEEEEEESCTTCCGG----GTTGGG--TE---EEEEE-EES--CHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCccHHH----HHHhhc--cc---CeEEE-ecC--CHHHHHHHHHHH
Confidence 355678999999988531 223333 22 48999 875 667777666655
No 122
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=56.10 E-value=77 Score=29.60 Aligned_cols=106 Identities=17% Similarity=0.218 Sum_probs=61.1
Q ss_pred eEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--eEEEEEecCCCcc-
Q 043031 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--FPFNISFLTDIKD- 242 (424)
Q Consensus 166 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--FeF~~v~~~~l~~- 242 (424)
-.|+|+|.|.|. +.-.|+.+ | ..++|| |+. +...++.+.+++ +..|+. .+|..- ++.+
T Consensus 125 ~~vLDlG~GsG~----~~~~la~~----~-~~~v~~-vDi--s~~al~~A~~n~----~~~~l~~~v~~~~~---D~~~~ 185 (284)
T 1nv8_A 125 KTVADIGTGSGA----IGVSVAKF----S-DAIVFA-TDV--SSKAVEIARKNA----ERHGVSDRFFVRKG---EFLEP 185 (284)
T ss_dssp CEEEEESCTTSH----HHHHHHHH----S-SCEEEE-EES--CHHHHHHHHHHH----HHTTCTTSEEEEES---STTGG
T ss_pred CEEEEEeCchhH----HHHHHHHC----C-CCEEEE-EEC--CHHHHHHHHHHH----HHcCCCCceEEEEC---cchhh
Confidence 479999999984 44455655 2 268999 884 777777666654 445764 555432 3332
Q ss_pred cccCCC---cEEEEecccccc--cc----CCC--------cchHHHHHHHH-HhcCCCeEEEEeeeC
Q 043031 243 FETNEG---EVVAVYSPVHLS--HM----IRK--------PNCLETFLTEL-RKINPCVMVVIEVES 291 (424)
Q Consensus 243 l~~~~~---E~laVN~~~~Lh--~l----~~~--------~~~~~~~L~~i-r~L~P~vvvl~E~ea 291 (424)
+. ..= +.++.|-++.-. ++ ... .+.++.+-+.+ +.++|.-.+++|...
T Consensus 186 ~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 186 FK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE 251 (284)
T ss_dssp GG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT
T ss_pred cc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 21 122 677888554311 11 001 12233344455 678999888887543
No 123
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=54.88 E-value=1.1e+02 Score=26.84 Aligned_cols=108 Identities=10% Similarity=0.128 Sum_probs=57.4
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc-eEEEEEecCCCcc
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP-FPFNISFLTDIKD 242 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp-FeF~~v~~~~l~~ 242 (424)
+.-.|+|+|.|.|. +...||.+. |. .++|| |+. +...++.+.+++ +..|++ .+|.. .+..+
T Consensus 38 ~~~~vLDiGcG~G~----~~~~la~~~---p~-~~v~g-iD~--s~~~l~~a~~~~----~~~~~~nv~~~~---~d~~~ 99 (213)
T 2fca_A 38 DNPIHIEVGTGKGQ----FISGMAKQN---PD-INYIG-IEL--FKSVIVTAVQKV----KDSEAQNVKLLN---IDADT 99 (213)
T ss_dssp CCCEEEEECCTTSH----HHHHHHHHC---TT-SEEEE-ECS--CHHHHHHHHHHH----HHSCCSSEEEEC---CCGGG
T ss_pred CCceEEEEecCCCH----HHHHHHHHC---CC-CCEEE-EEe--chHHHHHHHHHH----HHcCCCCEEEEe---CCHHH
Confidence 34569999999885 444566652 32 68999 984 677776665554 345653 44432 23333
Q ss_pred cc--cCCC--cEEEEeccccccccCCCcc--hHHHHHHHH-HhcCCCeEEEEee
Q 043031 243 FE--TNEG--EVVAVYSPVHLSHMIRKPN--CLETFLTEL-RKINPCVMVVIEV 289 (424)
Q Consensus 243 l~--~~~~--E~laVN~~~~Lh~l~~~~~--~~~~~L~~i-r~L~P~vvvl~E~ 289 (424)
+. +.++ +.+.+|+...-+.-..... ....+|+.+ +.|+|.-.+++.-
T Consensus 100 l~~~~~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 100 LTDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp HHHHCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred HHhhcCcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 21 2233 3555554321100000000 024567666 5689987777654
No 124
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=54.68 E-value=61 Score=31.17 Aligned_cols=115 Identities=17% Similarity=0.189 Sum_probs=62.8
Q ss_pred HHHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEE
Q 043031 153 IQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPF 232 (424)
Q Consensus 153 NqaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF 232 (424)
.++|++.+...+.-+|+|+|.|.|. +...++.+ + .-++|| |+. +. .++.+.+ .++..|++=..
T Consensus 39 ~~~i~~~l~~~~~~~VLDiGcGtG~----ls~~la~~-g----~~~V~~-vD~--s~-~~~~a~~----~~~~~~l~~~v 101 (348)
T 2y1w_A 39 QRAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQA-G----ARKIYA-VEA--ST-MAQHAEV----LVKSNNLTDRI 101 (348)
T ss_dssp HHHHHHTGGGTTTCEEEEETCTTSH----HHHHHHHT-T----CSEEEE-EEC--ST-HHHHHHH----HHHHTTCTTTE
T ss_pred HHHHHhccccCCcCEEEEcCCCccH----HHHHHHhC-C----CCEEEE-ECC--HH-HHHHHHH----HHHHcCCCCcE
Confidence 3677777765555689999999885 55556654 1 148999 885 32 3333333 33444553122
Q ss_pred EEEecCCCcccccCCC-cEEEEeccccccccCCCcchHHHHHHHHHhcCCCeEEEEe
Q 043031 233 NISFLTDIKDFETNEG-EVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIE 288 (424)
Q Consensus 233 ~~v~~~~l~~l~~~~~-E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvl~E 288 (424)
..+. .++.++..... +.|+.+.+ ++|+.. +...+.+...-+-|+|.-+++..
T Consensus 102 ~~~~-~d~~~~~~~~~~D~Ivs~~~--~~~~~~-~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 102 VVIP-GKVEEVSLPEQVDIIISEPM--GYMLFN-ERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EEEE-SCTTTCCCSSCEEEEEECCC--BTTBTT-TSHHHHHHHGGGGEEEEEEEESC
T ss_pred EEEE-cchhhCCCCCceeEEEEeCc--hhcCCh-HHHHHHHHHHHhhcCCCeEEEEe
Confidence 2232 23433322211 34444433 456543 23344555555788998877754
No 125
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=53.30 E-value=1.1e+02 Score=26.57 Aligned_cols=103 Identities=13% Similarity=0.157 Sum_probs=59.6
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--eEE
Q 043031 155 AVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--FPF 232 (424)
Q Consensus 155 aIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--FeF 232 (424)
.+++.+.-.+.-.|+|+|.|.|. +...||.+ + -++|| |+. +...++.+.++ ++..|++ ++|
T Consensus 46 ~~l~~l~~~~~~~vLDlGcG~G~----~~~~la~~-~-----~~v~~-vD~--s~~~~~~a~~~----~~~~g~~~~v~~ 108 (204)
T 3njr_A 46 LTLAALAPRRGELLWDIGGGSGS----VSVEWCLA-G-----GRAIT-IEP--RADRIENIQKN----IDTYGLSPRMRA 108 (204)
T ss_dssp HHHHHHCCCTTCEEEEETCTTCH----HHHHHHHT-T-----CEEEE-EES--CHHHHHHHHHH----HHHTTCTTTEEE
T ss_pred HHHHhcCCCCCCEEEEecCCCCH----HHHHHHHc-C-----CEEEE-EeC--CHHHHHHHHHH----HHHcCCCCCEEE
Confidence 35555554445579999999884 44556666 2 37999 874 66666666554 4556776 554
Q ss_pred EEEecCCCcc-cc-cCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 233 NISFLTDIKD-FE-TNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 233 ~~v~~~~l~~-l~-~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
..- +..+ +. ...=++++++..+ ..+ +++.+ +.|+|.-.+++.
T Consensus 109 ~~~---d~~~~~~~~~~~D~v~~~~~~----------~~~-~l~~~~~~LkpgG~lv~~ 153 (204)
T 3njr_A 109 VQG---TAPAALADLPLPEAVFIGGGG----------SQA-LYDRLWEWLAPGTRIVAN 153 (204)
T ss_dssp EES---CTTGGGTTSCCCSEEEECSCC----------CHH-HHHHHHHHSCTTCEEEEE
T ss_pred EeC---chhhhcccCCCCCEEEECCcc----------cHH-HHHHHHHhcCCCcEEEEE
Confidence 432 3322 21 1223466655422 134 66655 568997766664
No 126
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=52.75 E-value=1e+02 Score=28.98 Aligned_cols=107 Identities=15% Similarity=0.109 Sum_probs=60.2
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc-eEE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP-FPF 232 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp-FeF 232 (424)
..+++.+.-.+.-+|+|+|.|.|. +...|+.+ +++ .-++|| |+. +...++.+.+++ +..|++ .+|
T Consensus 65 ~~l~~~l~~~~~~~VLDiGcG~G~----~~~~la~~--~~~-~~~v~g-vD~--s~~~~~~a~~~~----~~~g~~~v~~ 130 (317)
T 1dl5_A 65 ALFMEWVGLDKGMRVLEIGGGTGY----NAAVMSRV--VGE-KGLVVS-VEY--SRKICEIAKRNV----ERLGIENVIF 130 (317)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSH----HHHHHHHH--HCT-TCEEEE-EES--CHHHHHHHHHHH----HHTTCCSEEE
T ss_pred HHHHHhcCCCCcCEEEEecCCchH----HHHHHHHh--cCC-CCEEEE-EEC--CHHHHHHHHHHH----HHcCCCCeEE
Confidence 455565554455689999998873 44556655 232 258999 874 666666665554 345554 444
Q ss_pred EEEecCCCcccccCCC--cEEEEeccccccccCCCcchHHHHHHHHHhcCCCeEEEEe
Q 043031 233 NISFLTDIKDFETNEG--EVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIE 288 (424)
Q Consensus 233 ~~v~~~~l~~l~~~~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvl~E 288 (424)
.. .+..+.....+ ++++++.+ +||+. + ...+.|+|.-.+++.
T Consensus 131 ~~---~d~~~~~~~~~~fD~Iv~~~~--~~~~~------~---~~~~~LkpgG~lvi~ 174 (317)
T 1dl5_A 131 VC---GDGYYGVPEFSPYDVIFVTVG--VDEVP------E---TWFTQLKEGGRVIVP 174 (317)
T ss_dssp EE---SCGGGCCGGGCCEEEEEECSB--BSCCC------H---HHHHHEEEEEEEEEE
T ss_pred EE---CChhhccccCCCeEEEEEcCC--HHHHH------H---HHHHhcCCCcEEEEE
Confidence 32 23322111122 45555544 56764 1 235678897666664
No 127
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=51.99 E-value=54 Score=29.17 Aligned_cols=103 Identities=9% Similarity=0.047 Sum_probs=55.1
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCccc
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDF 243 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l 243 (424)
+.-+|+|+|.|.|. +...|+.+ ++ -++|| |+. +...++.+.++ ++..+...+|..- ++.++
T Consensus 60 ~~~~vLDiGcGtG~----~~~~l~~~---~~--~~v~g-vD~--s~~~l~~a~~~----~~~~~~~v~~~~~---d~~~~ 120 (236)
T 1zx0_A 60 KGGRVLEVGFGMAI----AASKVQEA---PI--DEHWI-IEC--NDGVFQRLRDW----APRQTHKVIPLKG---LWEDV 120 (236)
T ss_dssp TCEEEEEECCTTSH----HHHHHHTS---CE--EEEEE-EEC--CHHHHHHHHHH----GGGCSSEEEEEES---CHHHH
T ss_pred CCCeEEEEeccCCH----HHHHHHhc---CC--CeEEE-EcC--CHHHHHHHHHH----HHhcCCCeEEEec---CHHHh
Confidence 45689999999883 44445543 23 28999 885 66666665553 3445544444332 33333
Q ss_pred --ccCCC--cEEEEeccccccccCC-CcchHHHHHHHH-HhcCCCeEEEE
Q 043031 244 --ETNEG--EVVAVYSPVHLSHMIR-KPNCLETFLTEL-RKINPCVMVVI 287 (424)
Q Consensus 244 --~~~~~--E~laVN~~~~Lh~l~~-~~~~~~~~L~~i-r~L~P~vvvl~ 287 (424)
...++ ++|+.+ .+.+ +... ....++.+|+.+ |-|+|.-+++.
T Consensus 121 ~~~~~~~~fD~V~~d-~~~~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~ 168 (236)
T 1zx0_A 121 APTLPDGHFDGILYD-TYPL-SEETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp GGGSCTTCEEEEEEC-CCCC-BGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred hcccCCCceEEEEEC-Cccc-chhhhhhhhHHHHHHHHHHhcCCCeEEEE
Confidence 33333 344441 2322 1111 122344666654 67899877664
No 128
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=49.52 E-value=24 Score=33.15 Aligned_cols=112 Identities=9% Similarity=-0.000 Sum_probs=58.8
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFN 233 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~ 233 (424)
..|++.+.-.+.-+|+|+|.|.|. +-..|+.+ | -++|| |+. +...++.+.+++... .+...+.
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~----~a~~La~~--g----~~V~g-vD~--S~~ml~~Ar~~~~~~----~v~~~~~ 97 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRF----LIEKALER--G----ASVTV-FDF--SQRMCDDLAEALADR----CVTIDLL 97 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHH----HHHHHHHT--T----CEEEE-EES--CHHHHHHHHHHTSSS----CCEEEEC
T ss_pred HHHHHhcCCCCcCEEEEEeCcchH----HHHHHHhc--C----CEEEE-EEC--CHHHHHHHHHHHHhc----cceeeee
Confidence 345566654555689999999885 55566665 2 27999 885 677776666554322 2222222
Q ss_pred EEecCCCcccccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 234 ISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 234 ~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
.+......++. .+=++|+.|. .+||+.. .....+|+.+ +.| |.-.+++-
T Consensus 98 ~~~~~~~~~~~-~~fD~Vv~~~--~l~~~~~--~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 98 DITAEIPKELA-GHFDFVLNDR--LINRFTT--EEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp CTTSCCCGGGT-TCCSEEEEES--CGGGSCH--HHHHHHHHHHHHHH-TTSEEEEE
T ss_pred ecccccccccC-CCccEEEEhh--hhHhCCH--HHHHHHHHHHHHhC-cCcEEEEE
Confidence 11000000111 1123555553 4678753 2234455544 556 87665553
No 129
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=48.68 E-value=1.3e+02 Score=25.79 Aligned_cols=104 Identities=13% Similarity=0.125 Sum_probs=58.6
Q ss_pred HHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc-eEEEE
Q 043031 156 VIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP-FPFNI 234 (424)
Q Consensus 156 IleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp-FeF~~ 234 (424)
+++.+.-.+.-+|+|+|.|.|.. ...|+.+ + -++|| |+. +...++.+.+++. ..|++ .+|..
T Consensus 69 ~~~~l~~~~~~~vLdiG~G~G~~----~~~la~~-~-----~~v~~-vD~--~~~~~~~a~~~~~----~~~~~~v~~~~ 131 (210)
T 3lbf_A 69 MTELLELTPQSRVLEIGTGSGYQ----TAILAHL-V-----QHVCS-VER--IKGLQWQARRRLK----NLDLHNVSTRH 131 (210)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHH----HHHHHHH-S-----SEEEE-EES--CHHHHHHHHHHHH----HTTCCSEEEEE
T ss_pred HHHhcCCCCCCEEEEEcCCCCHH----HHHHHHh-C-----CEEEE-Eec--CHHHHHHHHHHHH----HcCCCceEEEE
Confidence 45555545566899999998853 3345544 2 37999 874 6666766666554 34554 33332
Q ss_pred EecCCCcccccCCC--cEEEEeccccccccCCCcchHHHHHHHHHhcCCCeEEEEeee
Q 043031 235 SFLTDIKDFETNEG--EVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEVE 290 (424)
Q Consensus 235 v~~~~l~~l~~~~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvl~E~e 290 (424)
- +..+.....+ +.++++. .+||+.+ ...+.|+|.-.+++...
T Consensus 132 ~---d~~~~~~~~~~~D~i~~~~--~~~~~~~---------~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 132 G---DGWQGWQARAPFDAIIVTA--APPEIPT---------ALMTQLDEGGILVLPVG 175 (210)
T ss_dssp S---CGGGCCGGGCCEEEEEESS--BCSSCCT---------HHHHTEEEEEEEEEEEC
T ss_pred C---CcccCCccCCCccEEEEcc--chhhhhH---------HHHHhcccCcEEEEEEc
Confidence 2 2222111122 4555554 4577653 34678899766655443
No 130
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=48.26 E-value=63 Score=31.24 Aligned_cols=114 Identities=17% Similarity=0.199 Sum_probs=65.6
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCC-CceEEEEEecCCCcc-
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETIN-LPFPFNISFLTDIKD- 242 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lg-vpFeF~~v~~~~l~~- 242 (424)
.-+|+|+|.|.|. +...|+.+ +| .-+||+ |+. +...++.+.+++...+..++ -.++|.. .+..+
T Consensus 121 ~~~VLdIG~G~G~----~a~~la~~---~~-~~~V~~-VDi--s~~~l~~Ar~~~~~~~~gl~~~rv~~~~---~D~~~~ 186 (334)
T 1xj5_A 121 PKKVLVIGGGDGG----VLREVARH---AS-IEQIDM-CEI--DKMVVDVSKQFFPDVAIGYEDPRVNLVI---GDGVAF 186 (334)
T ss_dssp CCEEEEETCSSSH----HHHHHTTC---TT-CCEEEE-EES--CHHHHHHHHHHCHHHHGGGGSTTEEEEE---SCHHHH
T ss_pred CCEEEEECCCccH----HHHHHHHc---CC-CCEEEE-EEC--CHHHHHHHHHHHHhhccccCCCcEEEEE---CCHHHH
Confidence 3589999999885 55667665 23 368999 884 77778888777766544331 2344432 23222
Q ss_pred cc-cCCC--cEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEeeeCCCC
Q 043031 243 FE-TNEG--EVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEVESNDN 294 (424)
Q Consensus 243 l~-~~~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~ea~~n 294 (424)
+. ..++ +++++|+....+.. . .-....+++.+ +.|+|.-++++..+.-..
T Consensus 187 l~~~~~~~fDlIi~d~~~p~~~~-~-~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 240 (334)
T 1xj5_A 187 LKNAAEGSYDAVIVDSSDPIGPA-K-ELFEKPFFQSVARALRPGGVVCTQAESLWL 240 (334)
T ss_dssp HHTSCTTCEEEEEECCCCTTSGG-G-GGGSHHHHHHHHHHEEEEEEEEEECCCTTT
T ss_pred HHhccCCCccEEEECCCCccCcc-h-hhhHHHHHHHHHHhcCCCcEEEEecCCccc
Confidence 11 1122 56777765333211 1 00124566555 778999888887554433
No 131
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=47.89 E-value=1.1e+02 Score=27.67 Aligned_cols=114 Identities=12% Similarity=0.128 Sum_probs=59.7
Q ss_pred CCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHH--hCCCc-eEEEEEecC
Q 043031 162 SAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAE--TINLP-FPFNISFLT 238 (424)
Q Consensus 162 g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~--~lgvp-FeF~~v~~~ 238 (424)
..+...|+|+|.|.|. ++..||.+. |. ..++| |+. +...++.+.+++....+ ..+++ ++|..-
T Consensus 44 ~~~~~~vLDiGcG~G~----~~~~la~~~---p~-~~v~G-iDi--s~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~--- 109 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGG----LLVELSPLF---PD-TLILG-LEI--RVKVSDYVQDRIRALRAAPAGGFQNIACLRS--- 109 (235)
T ss_dssp --CCEEEEEETCTTCH----HHHHHGGGS---TT-SEEEE-EES--CHHHHHHHHHHHHHHHHSTTCCCTTEEEEEC---
T ss_pred cCCCCeEEEEccCCcH----HHHHHHHHC---CC-CeEEE-EEC--CHHHHHHHHHHHHHHHHHHhcCCCeEEEEEC---
Confidence 4456789999999885 555677663 32 58999 984 77778877777655432 12332 333322
Q ss_pred CCcc-cc--cCCCc--EEEEeccccccccCCCcch---HHHHHHHH-HhcCCCeEEEEeee
Q 043031 239 DIKD-FE--TNEGE--VVAVYSPVHLSHMIRKPNC---LETFLTEL-RKINPCVMVVIEVE 290 (424)
Q Consensus 239 ~l~~-l~--~~~~E--~laVN~~~~Lh~l~~~~~~---~~~~L~~i-r~L~P~vvvl~E~e 290 (424)
+..+ +. +.++. .+.+|+.---+... .... ...+|+.+ +.|+|.-.+++.-+
T Consensus 110 d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~-h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 110 NAMKHLPNFFYKGQLTKMFFLFPDPHFKRT-KHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp CTTTCHHHHCCTTCEEEEEEESCC------------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred cHHHhhhhhCCCcCeeEEEEeCCCchhhhh-hhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 3332 32 33443 44444322110000 0000 13566655 77899877766543
No 132
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=47.70 E-value=77 Score=25.95 Aligned_cols=101 Identities=10% Similarity=0.087 Sum_probs=56.7
Q ss_pred eEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcc-cc
Q 043031 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKD-FE 244 (424)
Q Consensus 166 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~-l~ 244 (424)
-+|+|+|.|.|. +...|+.+ + + ++|| |+. +...++.+.+++.. .|+..+|.. .+..+ +.
T Consensus 43 ~~vLD~GcG~G~----~~~~l~~~--~-~---~v~~-vD~--~~~~~~~a~~~~~~----~~~~~~~~~---~d~~~~~~ 102 (171)
T 1ws6_A 43 GRFLDPFAGSGA----VGLEAASE--G-W---EAVL-VEK--DPEAVRLLKENVRR----TGLGARVVA---LPVEVFLP 102 (171)
T ss_dssp CEEEEETCSSCH----HHHHHHHT--T-C---EEEE-ECC--CHHHHHHHHHHHHH----HTCCCEEEC---SCHHHHHH
T ss_pred CeEEEeCCCcCH----HHHHHHHC--C-C---eEEE-EeC--CHHHHHHHHHHHHH----cCCceEEEe---ccHHHHHH
Confidence 479999999984 44556655 3 2 2999 874 66667666665543 344333322 23322 11
Q ss_pred -c--C--CCcEEEEeccccccccCCCcchHHHHHHHH---HhcCCCeEEEEeeeCCCC
Q 043031 245 -T--N--EGEVVAVYSPVHLSHMIRKPNCLETFLTEL---RKINPCVMVVIEVESNDN 294 (424)
Q Consensus 245 -~--~--~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i---r~L~P~vvvl~E~ea~~n 294 (424)
. . .=+.++.|.++. ... +.+++.+ +-|+|.-+++++......
T Consensus 103 ~~~~~~~~~D~i~~~~~~~----~~~----~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 103 EAKAQGERFTVAFMAPPYA----MDL----AALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp HHHHTTCCEEEEEECCCTT----SCT----THHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred hhhccCCceEEEEECCCCc----hhH----HHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 1 1 124666676653 111 2344444 668999888887665544
No 133
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=46.26 E-value=1.7e+02 Score=29.44 Aligned_cols=118 Identities=11% Similarity=0.050 Sum_probs=63.2
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHH---HHHHHHHHHhCCCce
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEI---ENRLANFAETINLPF 230 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~t---g~rL~~fA~~lgvpF 230 (424)
..|++.+.-.+.-.|+|+|.|.|.+-.. ||.+.+ ..+++| |+. +...++.+ -+.+.+-++..|+.+
T Consensus 232 ~~ml~~l~l~~g~~VLDLGCGsG~la~~----LA~~~g----~~~V~G-VDi--s~~~l~~A~~Ml~~ar~~~~~~Gl~~ 300 (433)
T 1u2z_A 232 SDVYQQCQLKKGDTFMDLGSGVGNCVVQ----AALECG----CALSFG-CEI--MDDASDLTILQYEELKKRCKLYGMRL 300 (433)
T ss_dssp HHHHHHTTCCTTCEEEEESCTTSHHHHH----HHHHHC----CSEEEE-EEC--CHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHH----HHHHCC----CCEEEE-EeC--CHHHHHHHHHhHHHHHHHHHHcCCCC
Confidence 3566666544556799999998865443 444321 248999 875 55555544 233344455677531
Q ss_pred -EEEEEecCCCcc---cc--cCCCcEEEEeccccccccCCCcchHHHHHHHHHhcCCCeEEEEe
Q 043031 231 -PFNISFLTDIKD---FE--TNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIE 288 (424)
Q Consensus 231 -eF~~v~~~~l~~---l~--~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvl~E 288 (424)
.+..+...++.+ +. ..+=++|++|..+ + .++....+-...+.|+|.-.+++-
T Consensus 301 ~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l--~----~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 301 NNVEFSLKKSFVDNNRVAELIPQCDVILVNNFL--F----DEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp CCEEEEESSCSTTCHHHHHHGGGCSEEEECCTT--C----CHHHHHHHHHHHTTCCTTCEEEES
T ss_pred CceEEEEcCccccccccccccCCCCEEEEeCcc--c----cccHHHHHHHHHHhCCCCeEEEEe
Confidence 233332223321 21 2233577777543 1 122223344566889998776664
No 134
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=45.50 E-value=52 Score=33.56 Aligned_cols=113 Identities=16% Similarity=0.196 Sum_probs=62.7
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--eE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--FP 231 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--Fe 231 (424)
.+|++.+...+.-+|+|+|.|.|. +...++.+ | ..++|| |+. +. .++.+. +.++..|++ .+
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~----la~~la~~----~-~~~V~g-vD~--s~-~l~~A~----~~~~~~gl~~~v~ 210 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQA----G-ARKIYA-VEA--ST-MAQHAE----VLVKSNNLTDRIV 210 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTH----HHHHHHHT----T-CSEEEE-EEC--HH-HHHHHH----HHHHHTTCTTTEE
T ss_pred HHHHHhhhhcCCCEEEEecCcccH----HHHHHHHc----C-CCEEEE-EEc--HH-HHHHHH----HHHHHcCCCCcEE
Confidence 466666654455689999999885 44466654 2 258999 874 33 443333 334455663 44
Q ss_pred EEEEecCCCcccccCCC-cEEEEeccccccccCCCcchHHHHHHHHHhcCCCeEEEEee
Q 043031 232 FNISFLTDIKDFETNEG-EVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEV 289 (424)
Q Consensus 232 F~~v~~~~l~~l~~~~~-E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvl~E~ 289 (424)
|..- ++.++.+... +.++.|.+ ++|+.. .+..+.+...-+-|+|.-.++.+.
T Consensus 211 ~~~~---d~~~~~~~~~fD~Ivs~~~--~~~~~~-e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 211 VIPG---KVEEVSLPEQVDIIISEPM--GYMLFN-ERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp EEES---CTTTCCCSSCEEEEECCCC--HHHHTC-HHHHHHHHHGGGGEEEEEEEESCE
T ss_pred EEEC---chhhCccCCCeEEEEEeCc--hHhcCc-HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 4332 3433322211 34444433 355432 233445555557889988887544
No 135
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=45.28 E-value=1.2e+02 Score=25.48 Aligned_cols=34 Identities=26% Similarity=0.402 Sum_probs=24.3
Q ss_pred EEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHH
Q 043031 167 HIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEE 214 (424)
Q Consensus 167 HIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~ 214 (424)
.|+|+|.|.|. +...|+.+ + ++|| |+. +...++.
T Consensus 26 ~vLD~GcG~G~----~~~~l~~~--~-----~v~g-vD~--s~~~~~~ 59 (170)
T 3q87_B 26 IVLDLGTSTGV----ITEQLRKR--N-----TVVS-TDL--NIRALES 59 (170)
T ss_dssp EEEEETCTTCH----HHHHHTTT--S-----EEEE-EES--CHHHHHT
T ss_pred eEEEeccCccH----HHHHHHhc--C-----cEEE-EEC--CHHHHhc
Confidence 89999999984 55566655 2 8999 875 5555544
No 136
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=45.20 E-value=97 Score=27.05 Aligned_cols=106 Identities=17% Similarity=0.064 Sum_probs=55.8
Q ss_pred eeEEEeccCC-CCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCccc
Q 043031 165 KIHIIDLATR-TGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDF 243 (424)
Q Consensus 165 ~VHIIDf~i~-~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l 243 (424)
.-.|+|+|.| .|. +...|+.+. . .++|| |+. +...++.+.+++ +..|+..+|..-....+..+
T Consensus 56 ~~~vLDlG~G~~G~----~~~~la~~~---~--~~v~~-vD~--s~~~~~~a~~~~----~~~~~~v~~~~~d~~~~~~~ 119 (230)
T 3evz_A 56 GEVALEIGTGHTAM----MALMAEKFF---N--CKVTA-TEV--DEEFFEYARRNI----ERNNSNVRLVKSNGGIIKGV 119 (230)
T ss_dssp SCEEEEECCTTTCH----HHHHHHHHH---C--CEEEE-EEC--CHHHHHHHHHHH----HHTTCCCEEEECSSCSSTTT
T ss_pred CCEEEEcCCCHHHH----HHHHHHHhc---C--CEEEE-EEC--CHHHHHHHHHHH----HHhCCCcEEEeCCchhhhhc
Confidence 4579999999 885 334455553 1 47999 874 666676665553 44566555543321122222
Q ss_pred ccCCCcEEEEeccccccccCCC---------------cchHHHHHHHH-HhcCCCeEEEEe
Q 043031 244 ETNEGEVVAVYSPVHLSHMIRK---------------PNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 244 ~~~~~E~laVN~~~~Lh~l~~~---------------~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
.-..=+.++.|-++ ++..+. ......+|+.+ +-|+|.-.+++.
T Consensus 120 ~~~~fD~I~~npp~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 120 VEGTFDVIFSAPPY--YDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp CCSCEEEEEECCCC--C---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred ccCceeEEEECCCC--cCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence 21122466666554 222110 01124566655 457887666654
No 137
>1in0_A YAJQ protein, HI1034; alpha and beta sandwich, structural genomics, structure 2 function project, S2F, unknown function; 2.14A {Haemophilus influenzae} SCOP: d.58.49.1 d.58.49.1
Probab=45.17 E-value=20 Score=31.62 Aligned_cols=33 Identities=18% Similarity=0.372 Sum_probs=28.0
Q ss_pred ceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEE
Q 043031 196 LLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNIS 235 (424)
Q Consensus 196 ~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v 235 (424)
.+|+|| .+.+.|+++-..|.+ ..+++|++|.-.
T Consensus 129 ~vRVtg-----KkrDDLQ~viallk~--~d~~~plQF~Nf 161 (163)
T 1in0_A 129 QVRVTG-----KSRDDLQAVIQLVKS--AELGQPFQFNNF 161 (163)
T ss_dssp EEEEEE-----SCHHHHHHHHHHHHH--SCCSSCCEEEEE
T ss_pred EEEEec-----CCHHHHHHHHHHHHh--cCCCCCeeeccC
Confidence 599999 689999999988885 589999999753
No 138
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=44.97 E-value=19 Score=28.75 Aligned_cols=40 Identities=18% Similarity=0.346 Sum_probs=31.7
Q ss_pred CCCcceEEEEEeCCC--CCHHHHHHHHHHHHHHHHhCCCceEEE
Q 043031 192 CPPELLKITMVVGTT--PSKQKFEEIENRLANFAETINLPFPFN 233 (424)
Q Consensus 192 gpP~~LRIT~~i~~~--~~~~~l~~tg~rL~~fA~~lgvpFeF~ 233 (424)
||| .-|||. .++. .....|+++.+.+.+..+..|..|+|+
T Consensus 50 gaP-~Y~i~~-~~~D~k~ge~~L~~ai~~i~~~i~~~gG~~~v~ 91 (93)
T 2qn6_B 50 GAP-RYRVDV-VGTNPKEASEALNQIISNLIKIGKEENVDISVV 91 (93)
T ss_dssp STT-EEEEEE-EESCHHHHHHHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred cCC-eEEEEE-EecCHHHHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 788 489998 7642 123578899999999999999999885
No 139
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=44.94 E-value=2.1e+02 Score=27.24 Aligned_cols=111 Identities=14% Similarity=0.076 Sum_probs=61.2
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFN 233 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~ 233 (424)
++|.+.+.-.+.-.|+|+|.|.|. +...++.+ | . -+++| |+. +. .++.+.+++ +..|+.=...
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~----ls~~la~~--g-~--~~v~g-vD~--s~-~~~~a~~~~----~~~~~~~~i~ 116 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGI----LSMFAAKA--G-A--KKVLG-VDQ--SE-ILYQAMDII----RLNKLEDTIT 116 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSH----HHHHHHHT--T-C--SEEEE-EES--ST-HHHHHHHHH----HHTTCTTTEE
T ss_pred HHHHhhhhhcCCCEEEEeeccCcH----HHHHHHHc--C-C--CEEEE-ECh--HH-HHHHHHHHH----HHcCCCCcEE
Confidence 556665544444589999999984 44556655 2 1 48999 985 33 455554443 3445421222
Q ss_pred EEecCCCcccccCCC--cEEEEecc-ccccccCCCcchHHHHHHHH-HhcCCCeEEE
Q 043031 234 ISFLTDIKDFETNEG--EVVAVYSP-VHLSHMIRKPNCLETFLTEL-RKINPCVMVV 286 (424)
Q Consensus 234 ~v~~~~l~~l~~~~~--E~laVN~~-~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl 286 (424)
.+. .++.++.+.++ ++++.|.+ +.+++ ...++.+|+.+ +-|+|.-.++
T Consensus 117 ~~~-~d~~~~~~~~~~~D~Ivs~~~~~~l~~----~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 117 LIK-GKIEEVHLPVEKVDVIISEWMGYFLLF----ESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEE-SCTTTSCCSCSCEEEEEECCCBTTBTT----TCHHHHHHHHHHHHEEEEEEEE
T ss_pred EEE-eeHHHhcCCCCcEEEEEEcCchhhccC----HHHHHHHHHHHHhhcCCCcEEE
Confidence 232 24444433322 45555542 23333 23466777776 6789987776
No 140
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=44.74 E-value=1e+02 Score=27.45 Aligned_cols=109 Identities=11% Similarity=0.125 Sum_probs=60.6
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc-eEEEEEecCCCcc
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP-FPFNISFLTDIKD 242 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp-FeF~~v~~~~l~~ 242 (424)
+.-.|+|+|.|.|. +...||.+ . |. .+++| |+. +...++.+.++ ++..|++ ++| +. .+..+
T Consensus 34 ~~~~vLDiGcG~G~----~~~~lA~~--~-p~-~~v~g-iD~--s~~~l~~a~~~----~~~~~l~nv~~--~~-~Da~~ 95 (218)
T 3dxy_A 34 EAPVTLEIGFGMGA----SLVAMAKD--R-PE-QDFLG-IEV--HSPGVGACLAS----AHEEGLSNLRV--MC-HDAVE 95 (218)
T ss_dssp CCCEEEEESCTTCH----HHHHHHHH--C-TT-SEEEE-ECS--CHHHHHHHHHH----HHHTTCSSEEE--EC-SCHHH
T ss_pred CCCeEEEEeeeChH----HHHHHHHH--C-CC-CeEEE-EEe--cHHHHHHHHHH----HHHhCCCcEEE--EE-CCHHH
Confidence 44579999999885 44556655 2 32 58999 985 66666666554 3455653 333 32 23333
Q ss_pred -cc--cCCC--cEEEEeccccccccCCCc--chHHHHHHHH-HhcCCCeEEEEeee
Q 043031 243 -FE--TNEG--EVVAVYSPVHLSHMIRKP--NCLETFLTEL-RKINPCVMVVIEVE 290 (424)
Q Consensus 243 -l~--~~~~--E~laVN~~~~Lh~l~~~~--~~~~~~L~~i-r~L~P~vvvl~E~e 290 (424)
+. +.++ +.+.+|++...++..... -....+++.+ +.|+|.-++++.-+
T Consensus 96 ~l~~~~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 96 VLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp HHHHHSCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred HHHHHcCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 22 2333 356666544333221100 0013577777 55999988877654
No 141
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=44.45 E-value=37 Score=32.57 Aligned_cols=108 Identities=16% Similarity=0.222 Sum_probs=60.5
Q ss_pred eEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhC-CCceEEEEEecCCCcc-c
Q 043031 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETI-NLPFPFNISFLTDIKD-F 243 (424)
Q Consensus 166 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~l-gvpFeF~~v~~~~l~~-l 243 (424)
-+|+|+|.|.|. +...++.++ | ..++|+ |+. +...++.+.+++..++..+ +-.++| +. .+..+ +
T Consensus 118 ~~VLdiG~G~G~----~~~~l~~~~---~-~~~v~~-vDi--s~~~l~~ar~~~~~~~~~~~~~~v~~--~~-~D~~~~l 183 (321)
T 2pt6_A 118 KNVLVVGGGDGG----IIRELCKYK---S-VENIDI-CEI--DETVIEVSKIYFKNISCGYEDKRVNV--FI-EDASKFL 183 (321)
T ss_dssp CEEEEEECTTCH----HHHHHTTCT---T-CCEEEE-EES--CHHHHHHHHHHCTTTSGGGGSTTEEE--EE-SCHHHHH
T ss_pred CEEEEEcCCccH----HHHHHHHcC---C-CCEEEE-EEC--CHHHHHHHHHHHHhhccccCCCcEEE--EE-ccHHHHH
Confidence 579999999885 556666552 3 268999 874 6777777766654432222 112333 22 23222 2
Q ss_pred ccCC--CcEEEEeccccccccCCCcchH--HHHHHHH-HhcCCCeEEEEeeeC
Q 043031 244 ETNE--GEVVAVYSPVHLSHMIRKPNCL--ETFLTEL-RKINPCVMVVIEVES 291 (424)
Q Consensus 244 ~~~~--~E~laVN~~~~Lh~l~~~~~~~--~~~L~~i-r~L~P~vvvl~E~ea 291 (424)
...+ =+++++|.....+. +..+ ..+++.+ +.|+|.-+++++...
T Consensus 184 ~~~~~~fDvIi~d~~~p~~~----~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 184 ENVTNTYDVIIVDSSDPIGP----AETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp HHCCSCEEEEEEECCCSSSG----GGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred hhcCCCceEEEECCcCCCCc----chhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 1111 25777776422211 1111 4667665 678999998887653
No 142
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=44.16 E-value=2e+02 Score=28.41 Aligned_cols=108 Identities=15% Similarity=0.139 Sum_probs=63.0
Q ss_pred HHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc-eEEEE
Q 043031 156 VIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP-FPFNI 234 (424)
Q Consensus 156 IleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp-FeF~~ 234 (424)
+++.+...+.-.|+|+|.|.|.--. .||.+ + -+++| |+. +...++.+.+++ +..|++ .+|..
T Consensus 278 ~~~~l~~~~~~~VLDlgcG~G~~~~----~la~~-~-----~~V~g-vD~--s~~al~~A~~n~----~~~~~~~v~f~~ 340 (433)
T 1uwv_A 278 ALEWLDVQPEDRVLDLFCGMGNFTL----PLATQ-A-----ASVVG-VEG--VPALVEKGQQNA----RLNGLQNVTFYH 340 (433)
T ss_dssp HHHHHTCCTTCEEEEESCTTTTTHH----HHHTT-S-----SEEEE-EES--CHHHHHHHHHHH----HHTTCCSEEEEE
T ss_pred HHHhhcCCCCCEEEECCCCCCHHHH----HHHhh-C-----CEEEE-EeC--CHHHHHHHHHHH----HHcCCCceEEEE
Confidence 3344433333479999999997433 45554 1 37999 874 777777766554 445664 55543
Q ss_pred EecCC-CcccccC--CCcEEEEeccccccccCCCcchHHHHHHHHHhcCCCeEEEEee
Q 043031 235 SFLTD-IKDFETN--EGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEV 289 (424)
Q Consensus 235 v~~~~-l~~l~~~--~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvl~E~ 289 (424)
-...+ +.++... .=+++++|-+.. ..+.+++.+..++|+-++.+..
T Consensus 341 ~d~~~~l~~~~~~~~~fD~Vv~dPPr~---------g~~~~~~~l~~~~p~~ivyvsc 389 (433)
T 1uwv_A 341 ENLEEDVTKQPWAKNGFDKVLLDPARA---------GAAGVMQQIIKLEPIRIVYVSC 389 (433)
T ss_dssp CCTTSCCSSSGGGTTCCSEEEECCCTT---------CCHHHHHHHHHHCCSEEEEEES
T ss_pred CCHHHHhhhhhhhcCCCCEEEECCCCc---------cHHHHHHHHHhcCCCeEEEEEC
Confidence 32222 1111121 225677664421 1246889999999999887743
No 143
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=42.47 E-value=49 Score=31.16 Aligned_cols=117 Identities=15% Similarity=0.175 Sum_probs=64.6
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHH--------------HHHHH---h-
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRL--------------ANFAE---T- 225 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL--------------~~fA~---~- 225 (424)
+.+.|.|.|.+.|--=-++--.|++.-+..+...+||| ++. +...|+.+.+.. .+|-. .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~a-tDi--s~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~ 181 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFA-SDI--DTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGP 181 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEE-EES--CHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTT
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEE-EEC--CHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccC
Confidence 46999999999997544454455554222121269999 885 777787766543 22210 0
Q ss_pred -CC---C------ceEEEEEecCCCcccccC-CCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 226 -IN---L------PFPFNISFLTDIKDFETN-EGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 226 -lg---v------pFeF~~v~~~~l~~l~~~-~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
-| | ..+|... ++.+.... .+..=+|-|..-|+++. +.....+++.+ +.|+|.-+.+++
T Consensus 182 ~~~~~~v~~~lr~~V~F~~~---dl~~~~~~~~~~fDlI~crnvliyf~--~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 182 HEGLVRVRQELANYVEFSSV---NLLEKQYNVPGPFDAIFCRNVMIYFD--KTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp SCSEEEECHHHHTTEEEEEC---CTTCSSCCCCCCEEEEEECSSGGGSC--HHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred CCCceeechhhcccCeEEec---ccCCCCCCcCCCeeEEEECCchHhCC--HHHHHHHHHHHHHHhCCCcEEEEE
Confidence 00 0 1333332 23221111 24444444555677773 23345667665 678999888875
No 144
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=42.26 E-value=1.4e+02 Score=28.04 Aligned_cols=132 Identities=15% Similarity=0.140 Sum_probs=69.4
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHh-CCC-ceEEEEEecCCCcc
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAET-INL-PFPFNISFLTDIKD 242 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~-lgv-pFeF~~v~~~~l~~ 242 (424)
.-+|+|+|.|.|. +...|+.+ +| .-+||+ |+. +...++.+.+++...... ++- .+++.. .|..+
T Consensus 84 ~~~VLdiG~G~G~----~~~~l~~~---~~-~~~V~~-VDi--d~~vi~~ar~~~~~~~~~~~~~~rv~~~~---~D~~~ 149 (294)
T 3adn_A 84 AKHVLIIGGGDGA----MLREVTRH---KN-VESITM-VEI--DAGVVSFCRQYLPNHNAGSYDDPRFKLVI---DDGVN 149 (294)
T ss_dssp CCEEEEESCTTCH----HHHHHHTC---TT-CCEEEE-ECS--CTTHHHHHHHHCHHHHSSCTTCTTCCEEC---SCSCC
T ss_pred CCEEEEEeCChhH----HHHHHHhC---CC-CCEEEE-EEC--CHHHHHHHHHhhhhcccccccCCceEEEE---ChHHH
Confidence 3489999999885 55666665 23 358999 885 666777777776655421 211 222221 22222
Q ss_pred -cccCC--CcEEEEeccccccccCCCcchH--HHHHHHH-HhcCCCeEEEEeeeCCCCCCchHHHHHHHHHHHHHHHHhh
Q 043031 243 -FETNE--GEVVAVYSPVHLSHMIRKPNCL--ETFLTEL-RKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCL 316 (424)
Q Consensus 243 -l~~~~--~E~laVN~~~~Lh~l~~~~~~~--~~~L~~i-r~L~P~vvvl~E~ea~~ns~~F~~RF~eaL~~YsalFDsL 316 (424)
+.-.+ =+++++++.... -. +..+ ..|++.+ +.|+|.-++++..++....+ +.+.+.+.....+|...
T Consensus 150 ~l~~~~~~fDvIi~D~~~p~--~~--~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~---~~~~~~~~~l~~~F~~v 222 (294)
T 3adn_A 150 FVNQTSQTFDVIISDCTDPI--GP--GESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQ---EEAIDSHRKLSHYFSDV 222 (294)
T ss_dssp ---CCCCCEEEEEECC--------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCC---HHHHHHHHHHHHHCSEE
T ss_pred HHhhcCCCccEEEECCCCcc--Cc--chhccHHHHHHHHHHhcCCCCEEEEecCCcccch---HHHHHHHHHHHHHCCCe
Confidence 22112 256777665321 11 1111 4577655 67899988888665433333 33444444455556554
Q ss_pred h
Q 043031 317 E 317 (424)
Q Consensus 317 d 317 (424)
.
T Consensus 223 ~ 223 (294)
T 3adn_A 223 G 223 (294)
T ss_dssp E
T ss_pred E
Confidence 3
No 145
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=41.95 E-value=90 Score=29.58 Aligned_cols=131 Identities=9% Similarity=0.078 Sum_probs=69.5
Q ss_pred eEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhC-CCceEEEEEecCCCcc-c
Q 043031 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETI-NLPFPFNISFLTDIKD-F 243 (424)
Q Consensus 166 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~l-gvpFeF~~v~~~~l~~-l 243 (424)
-+|+|+|.|.|. +...|+.+. | .-+||+ |+. +...++.+.+++...+..+ +-.+++. . .+..+ +
T Consensus 97 ~~VLdiG~G~G~----~~~~l~~~~---~-~~~v~~-vDi--d~~~i~~ar~~~~~~~~~~~~~rv~v~--~-~Da~~~l 162 (304)
T 2o07_A 97 RKVLIIGGGDGG----VLREVVKHP---S-VESVVQ-CEI--DEDVIQVSKKFLPGMAIGYSSSKLTLH--V-GDGFEFM 162 (304)
T ss_dssp CEEEEEECTTSH----HHHHHTTCT---T-CCEEEE-EES--CHHHHHHHHHHCHHHHGGGGCTTEEEE--E-SCHHHHH
T ss_pred CEEEEECCCchH----HHHHHHHcC---C-CCEEEE-EEC--CHHHHHHHHHHhHHhhcccCCCcEEEE--E-CcHHHHH
Confidence 479999999885 555666652 3 258999 884 6777777777776654433 2223333 2 22222 2
Q ss_pred ccCC--CcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEeeeCCCCCCchHHHHHHHHHHHHHHHHh
Q 043031 244 ETNE--GEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDC 315 (424)
Q Consensus 244 ~~~~--~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~ea~~ns~~F~~RF~eaL~~YsalFDs 315 (424)
...+ =+++++++..... ....-....+++.+ +.|+|.-+++++.......+ +.+.+...+...+|..
T Consensus 163 ~~~~~~fD~Ii~d~~~~~~--~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~---~~~~~~~~~l~~~f~~ 232 (304)
T 2o07_A 163 KQNQDAFDVIITDSSDPMG--PAESLFKESYYQLMKTALKEDGVLCCQGECQWLHL---DLIKEMRQFCQSLFPV 232 (304)
T ss_dssp HTCSSCEEEEEEECC-------------CHHHHHHHHHEEEEEEEEEEEECTTTCH---HHHHHHHHHHHHHCSE
T ss_pred hhCCCCceEEEECCCCCCC--cchhhhHHHHHHHHHhccCCCeEEEEecCCcccch---HHHHHHHHHHHHhCCC
Confidence 1112 2577777653221 00000123566655 77899999888765433322 2233333444455543
No 146
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=41.36 E-value=1.8e+02 Score=26.90 Aligned_cols=132 Identities=14% Similarity=0.170 Sum_probs=71.5
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcc-c
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKD-F 243 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~-l 243 (424)
.-+|+|+|.|.|. +...++.++ | .-+||+ |+. +...++.+.+++.+.+..++-| .++.+. .+..+ +
T Consensus 76 ~~~VLdiG~G~G~----~~~~l~~~~---~-~~~v~~-vEi--d~~~v~~ar~~~~~~~~~~~~~-rv~v~~-~D~~~~l 142 (275)
T 1iy9_A 76 PEHVLVVGGGDGG----VIREILKHP---S-VKKATL-VDI--DGKVIEYSKKFLPSIAGKLDDP-RVDVQV-DDGFMHI 142 (275)
T ss_dssp CCEEEEESCTTCH----HHHHHTTCT---T-CSEEEE-EES--CHHHHHHHHHHCHHHHTTTTST-TEEEEE-SCSHHHH
T ss_pred CCEEEEECCchHH----HHHHHHhCC---C-CceEEE-EEC--CHHHHHHHHHHhHhhccccCCC-ceEEEE-CcHHHHH
Confidence 3579999999884 556666553 3 258999 874 6777777777776664433222 233332 23222 2
Q ss_pred cc--CCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEeeeCCCCCCch-HHHHHHHHHHHHHHHHh
Q 043031 244 ET--NEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEVESNDNLQTF-EDRFFGTLFHFGALFDC 315 (424)
Q Consensus 244 ~~--~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~ea~~ns~~F-~~RF~eaL~~YsalFDs 315 (424)
.- ..=++++++... +.-....-....+++.+ +.|+|.-++++.... |.+ .+.+.+.+.....+|..
T Consensus 143 ~~~~~~fD~Ii~d~~~--~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~----~~~~~~~~~~~~~~l~~~F~~ 212 (275)
T 1iy9_A 143 AKSENQYDVIMVDSTE--PVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN----PWFTPELITNVQRDVKEIFPI 212 (275)
T ss_dssp HTCCSCEEEEEESCSS--CCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC----TTTCHHHHHHHHHHHHTTCSE
T ss_pred hhCCCCeeEEEECCCC--CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC----ccccHHHHHHHHHHHHHhCCC
Confidence 11 122577776653 21111000013566544 778999888886432 221 34455555555555553
No 147
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=41.21 E-value=1.4e+02 Score=27.92 Aligned_cols=83 Identities=17% Similarity=0.338 Sum_probs=49.3
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFN 233 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~ 233 (424)
+.|++++.-.+. +|+|+|-|.|. |-..|+.+ + -++|| |+. +...++.+.+++. +-. ++
T Consensus 37 ~~Iv~~~~~~~~-~VLEIG~G~G~----lt~~L~~~--~----~~V~a-vEi--d~~~~~~l~~~~~------~~~--v~ 94 (271)
T 3fut_A 37 RRIVEAARPFTG-PVFEVGPGLGA----LTRALLEA--G----AEVTA-IEK--DLRLRPVLEETLS------GLP--VR 94 (271)
T ss_dssp HHHHHHHCCCCS-CEEEECCTTSH----HHHHHHHT--T----CCEEE-EES--CGGGHHHHHHHTT------TSS--EE
T ss_pred HHHHHhcCCCCC-eEEEEeCchHH----HHHHHHHc--C----CEEEE-EEC--CHHHHHHHHHhcC------CCC--EE
Confidence 456666665556 99999999885 67778776 2 26899 874 5555555555443 112 33
Q ss_pred EEecCCCcccccC---CCcEEEEeccccc
Q 043031 234 ISFLTDIKDFETN---EGEVVAVYSPVHL 259 (424)
Q Consensus 234 ~v~~~~l~~l~~~---~~E~laVN~~~~L 259 (424)
.+. .|..++... ....++-|.++..
T Consensus 95 vi~-~D~l~~~~~~~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 95 LVF-QDALLYPWEEVPQGSLLVANLPYHI 122 (271)
T ss_dssp EEE-SCGGGSCGGGSCTTEEEEEEECSSC
T ss_pred EEE-CChhhCChhhccCccEEEecCcccc
Confidence 343 233332221 3356777888754
No 148
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=41.03 E-value=46 Score=29.99 Aligned_cols=56 Identities=13% Similarity=0.197 Sum_probs=35.6
Q ss_pred HHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHH
Q 043031 156 VIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLA 220 (424)
Q Consensus 156 IleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~ 220 (424)
+++.+.+.+...|+|+|.|.| .+.-.|+.+-.. | ..+||| |+. +...++.+.+++.
T Consensus 43 ~l~~~~~~~~~~vLD~gcGsG----~~~~~la~~~~~-~-~~~v~g-vDi--s~~~l~~A~~~~~ 98 (250)
T 1o9g_A 43 ALARLPGDGPVTLWDPCCGSG----YLLTVLGLLHRR-S-LRQVIA-SDV--DPAPLELAAKNLA 98 (250)
T ss_dssp HHHTSSCCSCEEEEETTCTTS----HHHHHHHHHTGG-G-EEEEEE-EES--CHHHHHHHHHHHH
T ss_pred HHHhcccCCCCeEEECCCCCC----HHHHHHHHHhcc-C-CCeEEE-EEC--CHHHHHHHHHHHH
Confidence 344444456789999999999 344455544111 2 268999 885 6677766665544
No 149
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=40.84 E-value=60 Score=27.95 Aligned_cols=65 Identities=12% Similarity=0.148 Sum_probs=38.8
Q ss_pred HHHHHhhhc--CCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc-
Q 043031 153 IQAVIENVS--SAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP- 229 (424)
Q Consensus 153 NqaIleA~~--g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp- 229 (424)
.+.+++.+. -.+.-.|+|+|.|.|. +...|+.+ | ..++|| |+. +...++.+.+++ +..|++
T Consensus 47 ~~~~~~~l~~~~~~~~~vLDiG~G~G~----~~~~l~~~----~-~~~v~~-vD~--s~~~~~~a~~~~----~~~~~~~ 110 (205)
T 3grz_A 47 TQLAMLGIERAMVKPLTVADVGTGSGI----LAIAAHKL----G-AKSVLA-TDI--SDESMTAAEENA----ALNGIYD 110 (205)
T ss_dssp HHHHHHHHHHHCSSCCEEEEETCTTSH----HHHHHHHT----T-CSEEEE-EES--CHHHHHHHHHHH----HHTTCCC
T ss_pred HHHHHHHHHHhccCCCEEEEECCCCCH----HHHHHHHC----C-CCEEEE-EEC--CHHHHHHHHHHH----HHcCCCc
Confidence 344555443 2345689999999983 34446654 2 248999 874 666666655543 345654
Q ss_pred eEEE
Q 043031 230 FPFN 233 (424)
Q Consensus 230 FeF~ 233 (424)
++|.
T Consensus 111 v~~~ 114 (205)
T 3grz_A 111 IALQ 114 (205)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 4444
No 150
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=38.44 E-value=1.1e+02 Score=27.27 Aligned_cols=106 Identities=12% Similarity=0.073 Sum_probs=54.1
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCC-HHHHHHHHHHHHHHHHhCCCc-eEEEEEecCCCc
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPS-KQKFEEIENRLANFAETINLP-FPFNISFLTDIK 241 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~-~~~l~~tg~rL~~fA~~lgvp-FeF~~v~~~~l~ 241 (424)
..=+|+|+|.|.| .+...||.+. |. .++|| |+. + ...++.+ .+..+-++..|++ .+|..- +..
T Consensus 24 ~~~~vLDiGCG~G----~~~~~la~~~---~~-~~v~G-vD~--s~~~ml~~A-~~A~~~~~~~~~~~v~~~~~---d~~ 88 (225)
T 3p2e_A 24 FDRVHIDLGTGDG----RNIYKLAIND---QN-TFYIG-IDP--VKENLFDIS-KKIIKKPSKGGLSNVVFVIA---AAE 88 (225)
T ss_dssp CSEEEEEETCTTS----HHHHHHHHTC---TT-EEEEE-ECS--CCGGGHHHH-HHHTSCGGGTCCSSEEEECC---BTT
T ss_pred CCCEEEEEeccCc----HHHHHHHHhC---CC-CEEEE-EeC--CHHHHHHHH-HHHHHHHHHcCCCCeEEEEc---CHH
Confidence 3347999999988 4566677652 32 78999 985 4 3333322 1222223445664 555333 333
Q ss_pred cccc-CCCcEEEEeccccccc----cCCCcchHHHHHHHH-HhcCCCeEEEE
Q 043031 242 DFET-NEGEVVAVYSPVHLSH----MIRKPNCLETFLTEL-RKINPCVMVVI 287 (424)
Q Consensus 242 ~l~~-~~~E~laVN~~~~Lh~----l~~~~~~~~~~L~~i-r~L~P~vvvl~ 287 (424)
++.- ..|-+..|.+.+...+ ...+ ...+|+.+ |-|+|.-.+++
T Consensus 89 ~l~~~~~d~v~~i~~~~~~~~~~~~~~~~---~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 89 SLPFELKNIADSISILFPWGTLLEYVIKP---NRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp BCCGGGTTCEEEEEEESCCHHHHHHHHTT---CHHHHHHHHTTEEEEEEEEE
T ss_pred HhhhhccCeEEEEEEeCCCcHHhhhhhcc---hHHHHHHHHHhcCCCcEEEE
Confidence 3311 1244444444432222 1111 12455555 67899877666
No 151
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=38.35 E-value=1.2e+02 Score=30.08 Aligned_cols=99 Identities=13% Similarity=0.141 Sum_probs=53.5
Q ss_pred EEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcccccC
Q 043031 167 HIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFETN 246 (424)
Q Consensus 167 HIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~~~ 246 (424)
+|+|+|.|.| ++--+|.|.|. -+++| |+. +. .++ .. .+.++..|+.=....+. .+++++.+.
T Consensus 86 ~VLDvG~GtG-----iLs~~Aa~aGA----~~V~a-ve~--s~-~~~-~a---~~~~~~n~~~~~i~~i~-~~~~~~~lp 147 (376)
T 4hc4_A 86 TVLDVGAGTG-----ILSIFCAQAGA----RRVYA-VEA--SA-IWQ-QA---REVVRFNGLEDRVHVLP-GPVETVELP 147 (376)
T ss_dssp EEEEETCTTS-----HHHHHHHHTTC----SEEEE-EEC--ST-THH-HH---HHHHHHTTCTTTEEEEE-SCTTTCCCS
T ss_pred EEEEeCCCcc-----HHHHHHHHhCC----CEEEE-EeC--hH-HHH-HH---HHHHHHcCCCceEEEEe-eeeeeecCC
Confidence 5899988888 44456667653 27999 875 32 222 22 33455566654444453 344444433
Q ss_pred CCcEEEE-eccccccccCCCcchHHHHHHHH-HhcCCCeEEE
Q 043031 247 EGEVVAV-YSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVV 286 (424)
Q Consensus 247 ~~E~laV-N~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl 286 (424)
+.==++| +++ ...+-..+.++.++... |-|+|.-+++
T Consensus 148 e~~DvivsE~~---~~~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 148 EQVDAIVSEWM---GYGLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp SCEEEEECCCC---BTTBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred ccccEEEeecc---cccccccchhhhHHHHHHhhCCCCceEC
Confidence 2212333 232 22233345577888877 6678876554
No 152
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=38.13 E-value=1.3e+02 Score=28.15 Aligned_cols=130 Identities=9% Similarity=0.065 Sum_probs=69.9
Q ss_pred eEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCC-CceEEEEEecCCCcc-c
Q 043031 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETIN-LPFPFNISFLTDIKD-F 243 (424)
Q Consensus 166 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lg-vpFeF~~v~~~~l~~-l 243 (424)
-+|+|+|.|.|. +...++.+. | .-+||+ |+. +...++.+.+++.+++..++ -.+++ +. .+..+ +
T Consensus 92 ~~VLdiG~G~G~----~~~~l~~~~---~-~~~v~~-vDi--d~~~~~~a~~~~~~~~~~~~~~~v~~--~~-~D~~~~l 157 (296)
T 1inl_A 92 KKVLIIGGGDGG----TLREVLKHD---S-VEKAIL-CEV--DGLVIEAARKYLKQTSCGFDDPRAEI--VI-ANGAEYV 157 (296)
T ss_dssp CEEEEEECTTCH----HHHHHTTST---T-CSEEEE-EES--CHHHHHHHHHHCHHHHGGGGCTTEEE--EE-SCHHHHG
T ss_pred CEEEEEcCCcCH----HHHHHHhcC---C-CCEEEE-EEC--CHHHHHHHHHHhHhhccccCCCceEE--EE-CcHHHHH
Confidence 579999999885 556666653 3 258999 874 77778777777766654442 12333 22 22222 2
Q ss_pred ccCCC--cEEEEeccccccccCCCcc--hHHHHHHHH-HhcCCCeEEEEeeeCCCCCCch-HHHHHHHHHHHHHHHHhh
Q 043031 244 ETNEG--EVVAVYSPVHLSHMIRKPN--CLETFLTEL-RKINPCVMVVIEVESNDNLQTF-EDRFFGTLFHFGALFDCL 316 (424)
Q Consensus 244 ~~~~~--E~laVN~~~~Lh~l~~~~~--~~~~~L~~i-r~L~P~vvvl~E~ea~~ns~~F-~~RF~eaL~~YsalFDsL 316 (424)
...++ +++++|.... ... ... ....+++.+ +.|+|.-+++++.. +|.+ .+.+.+.+......|...
T Consensus 158 ~~~~~~fD~Ii~d~~~~--~~~-~~~~l~~~~~l~~~~~~LkpgG~lv~~~~----~~~~~~~~~~~~~~~l~~~F~~v 229 (296)
T 1inl_A 158 RKFKNEFDVIIIDSTDP--TAG-QGGHLFTEEFYQACYDALKEDGVFSAETE----DPFYDIGWFKLAYRRISKVFPIT 229 (296)
T ss_dssp GGCSSCEEEEEEEC-------------CCSHHHHHHHHHHEEEEEEEEEECC----CTTTTHHHHHHHHHHHHHHCSEE
T ss_pred hhCCCCceEEEEcCCCc--ccC-chhhhhHHHHHHHHHHhcCCCcEEEEEcc----CcccCHHHHHHHHHHHHHHCCce
Confidence 21122 5777775432 011 011 124566655 67899988888643 2222 344555555555555543
No 153
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=38.07 E-value=1.9e+02 Score=24.74 Aligned_cols=106 Identities=10% Similarity=0.103 Sum_probs=56.0
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc-eEEE
Q 043031 155 AVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP-FPFN 233 (424)
Q Consensus 155 aIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp-FeF~ 233 (424)
.+++.+.-.+.-+|+|+|.|.|.--.. |+.+. | |. -++|+ |+. +...++.+.+++.+ .|++ .+|.
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~----l~~~~-~-~~-~~v~~-vD~--~~~~~~~a~~~~~~----~~~~~v~~~ 133 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAV----TAEIV-G-ED-GLVVS-IER--IPELAEKAERTLRK----LGYDNVIVI 133 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHH----HHHHH-C-TT-SEEEE-EES--CHHHHHHHHHHHHH----HTCTTEEEE
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHH----HHHHh-C-CC-CEEEE-EeC--CHHHHHHHHHHHHH----cCCCCeEEE
Confidence 344444444455899999998754433 33332 3 32 58999 874 66667666665543 3433 3443
Q ss_pred EEecCCCcc-cc-cCCCcEEEEeccccccccCCCcchHHHHHHHHHhcCCCeEEEEe
Q 043031 234 ISFLTDIKD-FE-TNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIE 288 (424)
Q Consensus 234 ~v~~~~l~~-l~-~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvl~E 288 (424)
.- +..+ +. -.+=+.++++. .+||+.+ ...+.|+|.-.+++.
T Consensus 134 ~~---d~~~~~~~~~~fD~v~~~~--~~~~~~~---------~~~~~L~pgG~lv~~ 176 (215)
T 2yxe_A 134 VG---DGTLGYEPLAPYDRIYTTA--AGPKIPE---------PLIRQLKDGGKLLMP 176 (215)
T ss_dssp ES---CGGGCCGGGCCEEEEEESS--BBSSCCH---------HHHHTEEEEEEEEEE
T ss_pred EC---CcccCCCCCCCeeEEEECC--chHHHHH---------HHHHHcCCCcEEEEE
Confidence 22 2211 21 11113444443 4566641 445778887555443
No 154
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=37.18 E-value=2.2e+02 Score=25.87 Aligned_cols=108 Identities=18% Similarity=0.235 Sum_probs=58.8
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcc-
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKD- 242 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~- 242 (424)
+.-+|+|+|.|.|. +...|+.+. | ..++|| ++. +...++.+.++.. ..|++ ..+.+. .++.+
T Consensus 109 ~~~~vLDlG~GsG~----~~~~la~~~---~-~~~v~~-vD~--s~~~l~~a~~n~~----~~~~~-~v~~~~-~d~~~~ 171 (276)
T 2b3t_A 109 QPCRILDLGTGTGA----IALALASER---P-DCEIIA-VDR--MPDAVSLAQRNAQ----HLAIK-NIHILQ-SDWFSA 171 (276)
T ss_dssp SCCEEEEETCTTSH----HHHHHHHHC---T-TSEEEE-ECS--SHHHHHHHHHHHH----HHTCC-SEEEEC-CSTTGG
T ss_pred CCCEEEEecCCccH----HHHHHHHhC---C-CCEEEE-EEC--CHHHHHHHHHHHH----HcCCC-ceEEEE-cchhhh
Confidence 44689999999885 334455432 3 258999 874 7777776666544 34654 222232 23332
Q ss_pred cccCCCcEEEEecccccc---ccC-----CCc-----------chHHHHHHHH-HhcCCCeEEEEe
Q 043031 243 FETNEGEVVAVYSPVHLS---HMI-----RKP-----------NCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 243 l~~~~~E~laVN~~~~Lh---~l~-----~~~-----------~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
+.-..=+.++.|-++.-. |+. ..| .....+++.+ +-|+|.-.+++|
T Consensus 172 ~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 172 LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 211122567777554211 110 011 1234566655 567998888877
No 155
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=37.15 E-value=2.3e+02 Score=26.27 Aligned_cols=87 Identities=9% Similarity=0.167 Sum_probs=48.0
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFN 233 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~ 233 (424)
+.|++++.-.+.-+|+|+|.|.|.--..| +.+ + -++|| |+. +...++.+.+++ +..|+.=.++
T Consensus 18 ~~i~~~~~~~~~~~VLDiG~G~G~lt~~L----~~~--~----~~v~~-vD~--~~~~~~~a~~~~----~~~~~~~~v~ 80 (285)
T 1zq9_A 18 NSIIDKAALRPTDVVLEVGPGTGNMTVKL----LEK--A----KKVVA-CEL--DPRLVAELHKRV----QGTPVASKLQ 80 (285)
T ss_dssp HHHHHHTCCCTTCEEEEECCTTSTTHHHH----HHH--S----SEEEE-EES--CHHHHHHHHHHH----TTSTTGGGEE
T ss_pred HHHHHhcCCCCCCEEEEEcCcccHHHHHH----Hhh--C----CEEEE-EEC--CHHHHHHHHHHH----HhcCCCCceE
Confidence 45566665445568999999999855444 444 2 17999 874 565565555443 3334421233
Q ss_pred EEecCCCcccccCCCcEEEEecccc
Q 043031 234 ISFLTDIKDFETNEGEVVAVYSPVH 258 (424)
Q Consensus 234 ~v~~~~l~~l~~~~~E~laVN~~~~ 258 (424)
.+. .+..++....=+.++.|.++.
T Consensus 81 ~~~-~D~~~~~~~~fD~vv~nlpy~ 104 (285)
T 1zq9_A 81 VLV-GDVLKTDLPFFDTCVANLPYQ 104 (285)
T ss_dssp EEE-SCTTTSCCCCCSEEEEECCGG
T ss_pred EEE-cceecccchhhcEEEEecCcc
Confidence 332 233322222234777787764
No 156
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=36.54 E-value=2e+02 Score=24.47 Aligned_cols=92 Identities=17% Similarity=0.233 Sum_probs=51.6
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcccc
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFE 244 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~ 244 (424)
.-+|+|+|.|.|. +...|+.+ | + -++|| |+. +...++.+.+++ +..|+..+|.. .+..++.
T Consensus 50 ~~~vlD~g~G~G~----~~~~l~~~--~-~--~~v~~-vD~--~~~~~~~a~~~~----~~~~~~~~~~~---~d~~~~~ 110 (207)
T 1wy7_A 50 GKVVADLGAGTGV----LSYGALLL--G-A--KEVIC-VEV--DKEAVDVLIENL----GEFKGKFKVFI---GDVSEFN 110 (207)
T ss_dssp TCEEEEETCTTCH----HHHHHHHT--T-C--SEEEE-EES--CHHHHHHHHHHT----GGGTTSEEEEE---SCGGGCC
T ss_pred cCEEEEeeCCCCH----HHHHHHHc--C-C--CEEEE-EEC--CHHHHHHHHHHH----HHcCCCEEEEE---CchHHcC
Confidence 3579999999987 44556665 2 2 27999 874 666666555543 34455444432 2333332
Q ss_pred cCCCcEEEEeccccccccCCCcchHHHHHHHHHhcC
Q 043031 245 TNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKIN 280 (424)
Q Consensus 245 ~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~ 280 (424)
- .=+.++.|.++.. ... .....+|+.+.++-
T Consensus 111 ~-~~D~v~~~~p~~~--~~~--~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 111 S-RVDIVIMNPPFGS--QRK--HADRPFLLKAFEIS 141 (207)
T ss_dssp C-CCSEEEECCCCSS--SST--TTTHHHHHHHHHHC
T ss_pred C-CCCEEEEcCCCcc--ccC--CchHHHHHHHHHhc
Confidence 1 2357888887633 221 22335666555444
No 157
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=36.22 E-value=3e+02 Score=26.44 Aligned_cols=94 Identities=15% Similarity=0.136 Sum_probs=54.6
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcc-c
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKD-F 243 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~-l 243 (424)
.-.|+|+| |.|. +...|+.+ +|. .++|| |+. +...++.+.+++.+ .|+. ..+.+. .++.+ +
T Consensus 173 ~~~VLDlG-G~G~----~~~~la~~--~~~--~~v~~-vDi--~~~~l~~a~~~~~~----~g~~-~v~~~~-~D~~~~l 234 (373)
T 2qm3_A 173 NKDIFVLG-DDDL----TSIALMLS--GLP--KRIAV-LDI--DERLTKFIEKAANE----IGYE-DIEIFT-FDLRKPL 234 (373)
T ss_dssp TCEEEEES-CTTC----HHHHHHHH--TCC--SEEEE-ECS--CHHHHHHHHHHHHH----HTCC-CEEEEC-CCTTSCC
T ss_pred CCEEEEEC-CCCH----HHHHHHHh--CCC--CEEEE-EEC--CHHHHHHHHHHHHH----cCCC-CEEEEE-Chhhhhc
Confidence 35799999 8776 22344544 443 48999 874 67777777666443 4553 233332 24433 3
Q ss_pred cc--C-CCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCe
Q 043031 244 ET--N-EGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCV 283 (424)
Q Consensus 244 ~~--~-~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~v 283 (424)
.. . .=+++++|.++.... ...+|+.+ +.|+|.-
T Consensus 235 ~~~~~~~fD~Vi~~~p~~~~~-------~~~~l~~~~~~LkpgG 271 (373)
T 2qm3_A 235 PDYALHKFDTFITDPPETLEA-------IRAFVGRGIATLKGPR 271 (373)
T ss_dssp CTTTSSCBSEEEECCCSSHHH-------HHHHHHHHHHTBCSTT
T ss_pred hhhccCCccEEEECCCCchHH-------HHHHHHHHHHHcccCC
Confidence 22 1 226888888764321 35666655 7789944
No 158
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=36.10 E-value=62 Score=30.24 Aligned_cols=107 Identities=15% Similarity=0.206 Sum_probs=58.9
Q ss_pred eEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhC-CCceEEEEEecCCCcc-c
Q 043031 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETI-NLPFPFNISFLTDIKD-F 243 (424)
Q Consensus 166 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~l-gvpFeF~~v~~~~l~~-l 243 (424)
-+|+|+|.|.|. +...++.+ +| .-++|+ |+. +...++.+.+++...+..+ +-.+++ +. .+..+ +
T Consensus 80 ~~VLdiG~G~G~----~~~~l~~~---~~-~~~v~~-vDi--d~~~i~~a~~~~~~~~~~~~~~~v~~--~~-~D~~~~l 145 (283)
T 2i7c_A 80 KNVLVVGGGDGG----IIRELCKY---KS-VENIDI-CEI--DETVIEVSKIYFKNISCGYEDKRVNV--FI-EDASKFL 145 (283)
T ss_dssp CEEEEEECTTSH----HHHHHTTC---TT-CCEEEE-EES--CHHHHHHHHHHCTTTSGGGGSTTEEE--EE-SCHHHHH
T ss_pred CeEEEEeCCcCH----HHHHHHHc---CC-CCEEEE-EEC--CHHHHHHHHHHhHHhccccCCCcEEE--EE-CChHHHH
Confidence 589999999885 56666654 23 258999 874 6666666666554332212 112333 22 23222 2
Q ss_pred ccCC--CcEEEEeccccccccCCCcchH--HHHHHHH-HhcCCCeEEEEeee
Q 043031 244 ETNE--GEVVAVYSPVHLSHMIRKPNCL--ETFLTEL-RKINPCVMVVIEVE 290 (424)
Q Consensus 244 ~~~~--~E~laVN~~~~Lh~l~~~~~~~--~~~L~~i-r~L~P~vvvl~E~e 290 (424)
.-.+ =+++++++....+ . ...+ ..+++.+ +.|+|.-++++...
T Consensus 146 ~~~~~~fD~Ii~d~~~~~~--~--~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 146 ENVTNTYDVIIVDSSDPIG--P--AETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp HHCCSCEEEEEEECCCTTT--G--GGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred HhCCCCceEEEEcCCCCCC--c--chhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 1112 2577777643221 1 1122 5677766 67899988887644
No 159
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=35.82 E-value=2.4e+02 Score=25.25 Aligned_cols=108 Identities=19% Similarity=0.174 Sum_probs=58.6
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCccc
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDF 243 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l 243 (424)
+.-.|+|+|.|.|. +...|+.+. + . +||| |+. +...++.+.+++ +..|+.=....+. .++.++
T Consensus 49 ~~~~vLDlG~G~G~----~~~~la~~~---~-~-~v~g-vDi--~~~~~~~a~~n~----~~~~~~~~v~~~~-~D~~~~ 111 (259)
T 3lpm_A 49 RKGKIIDLCSGNGI----IPLLLSTRT---K-A-KIVG-VEI--QERLADMAKRSV----AYNQLEDQIEIIE-YDLKKI 111 (259)
T ss_dssp SCCEEEETTCTTTH----HHHHHHTTC---C-C-EEEE-ECC--SHHHHHHHHHHH----HHTTCTTTEEEEC-SCGGGG
T ss_pred CCCEEEEcCCchhH----HHHHHHHhc---C-C-cEEE-EEC--CHHHHHHHHHHH----HHCCCcccEEEEE-CcHHHh
Confidence 34579999999984 445677762 3 2 8999 885 666666665554 3455541223332 233332
Q ss_pred c--c--CCCcEEEEecccccc---ccCCC-----------cchHHHHHHHH-HhcCCCeEEEEe
Q 043031 244 E--T--NEGEVVAVYSPVHLS---HMIRK-----------PNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 244 ~--~--~~~E~laVN~~~~Lh---~l~~~-----------~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
. . ..=+.|+.|-++.-. ++... ....+.+++.+ +-|+|.-.+++.
T Consensus 112 ~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 112 TDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp GGTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 1 2 222578888776332 22111 01244566655 668997777764
No 160
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=35.73 E-value=1e+02 Score=29.13 Aligned_cols=108 Identities=13% Similarity=0.179 Sum_probs=60.4
Q ss_pred eEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHh-C-CCceEEEEEecCCCcc-
Q 043031 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAET-I-NLPFPFNISFLTDIKD- 242 (424)
Q Consensus 166 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~-l-gvpFeF~~v~~~~l~~- 242 (424)
-+|+|+|.|.|. +...|+.++ | .-+||+ |+. +...++.+.+++.+.... + +-.++|.. .+..+
T Consensus 79 ~~VLdiG~G~G~----~~~~l~~~~---~-~~~v~~-vDi--d~~~i~~ar~~~~~~~~~~~~~~~v~~~~---~D~~~~ 144 (314)
T 1uir_A 79 KRVLIVGGGEGA----TLREVLKHP---T-VEKAVM-VDI--DGELVEVAKRHMPEWHQGAFDDPRAVLVI---DDARAY 144 (314)
T ss_dssp CEEEEEECTTSH----HHHHHTTST---T-CCEEEE-EES--CHHHHHHHHHHCHHHHTTGGGCTTEEEEE---SCHHHH
T ss_pred CeEEEEcCCcCH----HHHHHHhcC---C-CCEEEE-EEC--CHHHHHHHHHHhHhhccccccCCceEEEE---chHHHH
Confidence 589999999885 566676653 3 258999 874 677777777766554332 2 12233322 23222
Q ss_pred cccCCC--cEEEEeccccccccCCC-cch--HHHHHHHH-HhcCCCeEEEEee
Q 043031 243 FETNEG--EVVAVYSPVHLSHMIRK-PNC--LETFLTEL-RKINPCVMVVIEV 289 (424)
Q Consensus 243 l~~~~~--E~laVN~~~~Lh~l~~~-~~~--~~~~L~~i-r~L~P~vvvl~E~ 289 (424)
+...++ ++++++... |.-.+. +.. ...+++.+ +.|+|.-++++..
T Consensus 145 l~~~~~~fD~Ii~d~~~--~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 145 LERTEERYDVVIIDLTD--PVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp HHHCCCCEEEEEEECCC--CBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHhcCCCccEEEECCCC--cccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 211122 577777543 220111 111 24667665 6789987777753
No 161
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=35.39 E-value=2.8e+02 Score=27.55 Aligned_cols=96 Identities=18% Similarity=0.264 Sum_probs=58.6
Q ss_pred eEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCccccc
Q 043031 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFET 245 (424)
Q Consensus 166 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~~ 245 (424)
-.|+|+|.|.|. +...||.+ + -+++| |+. +...++.+.+++ +..|++.+|..- +..++--
T Consensus 292 ~~VLDlgcG~G~----~sl~la~~--~----~~V~g-vD~--s~~ai~~A~~n~----~~ngl~v~~~~~---d~~~~~~ 351 (425)
T 2jjq_A 292 EKILDMYSGVGT----FGIYLAKR--G----FNVKG-FDS--NEFAIEMARRNV----EINNVDAEFEVA---SDREVSV 351 (425)
T ss_dssp SEEEEETCTTTH----HHHHHHHT--T----CEEEE-EES--CHHHHHHHHHHH----HHHTCCEEEEEC---CTTTCCC
T ss_pred CEEEEeeccchH----HHHHHHHc--C----CEEEE-EEC--CHHHHHHHHHHH----HHcCCcEEEEEC---ChHHcCc
Confidence 378999999885 33346654 2 27999 874 777777766654 344666444433 3333211
Q ss_pred CCCcEEEEeccccccccCCCcchHHHHHHHHHhcCCCeEEEEee
Q 043031 246 NEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEV 289 (424)
Q Consensus 246 ~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvl~E~ 289 (424)
..=+++++|-+. .+..+.+++.++.|+|+-++.+.-
T Consensus 352 ~~fD~Vv~dPPr--------~g~~~~~~~~l~~l~p~givyvsc 387 (425)
T 2jjq_A 352 KGFDTVIVDPPR--------AGLHPRLVKRLNREKPGVIVYVSC 387 (425)
T ss_dssp TTCSEEEECCCT--------TCSCHHHHHHHHHHCCSEEEEEES
T ss_pred cCCCEEEEcCCc--------cchHHHHHHHHHhcCCCcEEEEEC
Confidence 122467766442 122346889999999998888753
No 162
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=34.85 E-value=1.9e+02 Score=23.85 Aligned_cols=104 Identities=15% Similarity=0.180 Sum_probs=57.8
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--eEEEEEecCCCcc
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--FPFNISFLTDIKD 242 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--FeF~~v~~~~l~~ 242 (424)
.-+|+|+|.|.|.- ...++.++ .-++|| |+. +...++.+.+++.. .|++ .+|..- +..+
T Consensus 45 ~~~vLD~GcG~G~~----~~~~~~~~-----~~~v~~-vD~--~~~~~~~a~~~~~~----~~~~~~~~~~~~---d~~~ 105 (187)
T 2fhp_A 45 GGMALDLYSGSGGL----AIEAVSRG-----MDKSIC-IEK--NFAALKVIKENIAI----TKEPEKFEVRKM---DANR 105 (187)
T ss_dssp SCEEEETTCTTCHH----HHHHHHTT-----CSEEEE-EES--CHHHHHHHHHHHHH----HTCGGGEEEEES---CHHH
T ss_pred CCCEEEeCCccCHH----HHHHHHcC-----CCEEEE-EEC--CHHHHHHHHHHHHH----hCCCcceEEEEC---cHHH
Confidence 34899999998863 23344441 148999 884 66667666655543 3543 444332 3222
Q ss_pred -cc-----cCCCcEEEEeccccccccCCCcchHHHHHHHH---HhcCCCeEEEEeeeCCCC
Q 043031 243 -FE-----TNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL---RKINPCVMVVIEVESNDN 294 (424)
Q Consensus 243 -l~-----~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i---r~L~P~vvvl~E~ea~~n 294 (424)
+. -..=+.++.|.++..+ ..+.+++.+ +-|+|.-+++++......
T Consensus 106 ~~~~~~~~~~~fD~i~~~~~~~~~-------~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 106 ALEQFYEEKLQFDLVLLDPPYAKQ-------EIVSQLEKMLERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp HHHHHHHTTCCEEEEEECCCGGGC-------CHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred HHHHHHhcCCCCCEEEECCCCCch-------hHHHHHHHHHHhcccCCCCEEEEEeCCccc
Confidence 11 1111466667664311 123444444 558999888887666544
No 163
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=34.61 E-value=3.1e+02 Score=26.37 Aligned_cols=106 Identities=16% Similarity=0.175 Sum_probs=60.1
Q ss_pred CCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCC--ceEEEEEecCCC
Q 043031 163 AKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINL--PFPFNISFLTDI 240 (424)
Q Consensus 163 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgv--pFeF~~v~~~~l 240 (424)
.+.-.|+|.|.|.|. +.-.+|.+ ++. -+|+| ++. +...++.+.+++ +..|+ ..+|..- +.
T Consensus 216 ~~~~~vLD~gCGsG~----~~i~~a~~--~~~--~~v~g-~Di--s~~~l~~A~~n~----~~~gl~~~i~~~~~---D~ 277 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGT----ILIELALR--RYS--GEIIG-IEK--YRKHLIGAEMNA----LAAGVLDKIKFIQG---DA 277 (373)
T ss_dssp CCSCCEEETTCTTCH----HHHHHHHT--TCC--SCEEE-EES--CHHHHHHHHHHH----HHTTCGGGCEEEEC---CG
T ss_pred CCCCEEEEccCcCcH----HHHHHHHh--CCC--CeEEE-EeC--CHHHHHHHHHHH----HHcCCCCceEEEEC---Ch
Confidence 344579999999884 45556655 322 37999 874 677777776664 44566 4555443 33
Q ss_pred cccccC--CCcEEEEeccccccccCCCc---chHHHHHHHHHh-cCCCeEEEE
Q 043031 241 KDFETN--EGEVVAVYSPVHLSHMIRKP---NCLETFLTELRK-INPCVMVVI 287 (424)
Q Consensus 241 ~~l~~~--~~E~laVN~~~~Lh~l~~~~---~~~~~~L~~ir~-L~P~vvvl~ 287 (424)
.++... .=+.++.|-++..+ +.... .-...+++.+++ |++.+++++
T Consensus 278 ~~~~~~~~~fD~Ii~npPyg~r-~~~~~~~~~ly~~~~~~l~r~l~g~~~~i~ 329 (373)
T 3tm4_A 278 TQLSQYVDSVDFAISNLPYGLK-IGKKSMIPDLYMKFFNELAKVLEKRGVFIT 329 (373)
T ss_dssp GGGGGTCSCEEEEEEECCCC-------CCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhCCcccCCcCEEEECCCCCcc-cCcchhHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 333322 22578888887542 22111 112567777766 666666654
No 164
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=34.28 E-value=1.4e+02 Score=26.42 Aligned_cols=57 Identities=9% Similarity=0.039 Sum_probs=36.4
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHH
Q 043031 155 AVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLAN 221 (424)
Q Consensus 155 aIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~ 221 (424)
.|++.+.-.+.-+|+|+|.|.|. +...|+.+- + | ..++|+ ++. +...++.+.+++.+
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~-~-~-~~~v~~-~D~--~~~~~~~a~~~~~~ 140 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGA----LTLFLANIV-G-P-EGRVVS-YEI--REDFAKLAWENIKW 140 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSH----HHHHHHHHH-C-T-TSEEEE-ECS--CHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCEEEEecCCchH----HHHHHHHHh-C-C-CeEEEE-Eec--CHHHHHHHHHHHHH
Confidence 55555554555679999999884 444444442 2 2 258999 874 66677766666544
No 165
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=34.08 E-value=79 Score=28.85 Aligned_cols=98 Identities=15% Similarity=0.145 Sum_probs=53.6
Q ss_pred CCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc-eEEEEEecCCCc
Q 043031 163 AKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP-FPFNISFLTDIK 241 (424)
Q Consensus 163 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp-FeF~~v~~~~l~ 241 (424)
.+.-+|+|+|.|.|.--..| |... |. .+||+ |+. +...++.+.++ ++.+|+. .+|..- +.+
T Consensus 79 ~~~~~vLDiG~G~G~~~i~l----a~~~---~~-~~v~~-vD~--s~~~~~~a~~~----~~~~~l~~v~~~~~---d~~ 140 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPL----KIVR---PE-LELVL-VDA--TRKKVAFVERA----IEVLGLKGARALWG---RAE 140 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHH----HHHC---TT-CEEEE-EES--CHHHHHHHHHH----HHHHTCSSEEEEEC---CHH
T ss_pred CCCCEEEEEcCCCCHHHHHH----HHHC---CC-CEEEE-EEC--CHHHHHHHHHH----HHHhCCCceEEEEC---cHH
Confidence 34568999999999754333 3221 32 68999 985 66666655544 3445664 444332 333
Q ss_pred ccccC---CC--cEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEe
Q 043031 242 DFETN---EG--EVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIE 288 (424)
Q Consensus 242 ~l~~~---~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E 288 (424)
++... ++ ++++.+.. ...+.++..+ +-|+|.-..++-
T Consensus 141 ~~~~~~~~~~~fD~I~s~a~----------~~~~~ll~~~~~~LkpgG~l~~~ 183 (249)
T 3g89_A 141 VLAREAGHREAYARAVARAV----------APLCVLSELLLPFLEVGGAAVAM 183 (249)
T ss_dssp HHTTSTTTTTCEEEEEEESS----------CCHHHHHHHHGGGEEEEEEEEEE
T ss_pred HhhcccccCCCceEEEECCc----------CCHHHHHHHHHHHcCCCeEEEEE
Confidence 32211 11 34444322 1245677665 567887766553
No 166
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=33.95 E-value=2.2e+02 Score=24.85 Aligned_cols=99 Identities=13% Similarity=0.124 Sum_probs=52.5
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcc--
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKD-- 242 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~-- 242 (424)
.-+|+|+|.|.|. +...|+.+. ||- -+++| |+. +...++.+ .+.|+.. -..+|.. .+..+
T Consensus 78 ~~~vLDlG~G~G~----~~~~la~~~-g~~--~~v~g-vD~--s~~~i~~~----~~~a~~~-~~v~~~~---~d~~~~~ 139 (233)
T 2ipx_A 78 GAKVLYLGAASGT----TVSHVSDIV-GPD--GLVYA-VEF--SHRSGRDL----INLAKKR-TNIIPVI---EDARHPH 139 (233)
T ss_dssp TCEEEEECCTTSH----HHHHHHHHH-CTT--CEEEE-ECC--CHHHHHHH----HHHHHHC-TTEEEEC---SCTTCGG
T ss_pred CCEEEEEcccCCH----HHHHHHHHh-CCC--cEEEE-EEC--CHHHHHHH----HHHhhcc-CCeEEEE---cccCChh
Confidence 4479999999885 445555553 222 48999 875 44433332 3334432 2233322 23332
Q ss_pred -cccCCC--cEEEEeccccccccCCCcchHHHHHH-HHHhcCCCeEEEEee
Q 043031 243 -FETNEG--EVVAVYSPVHLSHMIRKPNCLETFLT-ELRKINPCVMVVIEV 289 (424)
Q Consensus 243 -l~~~~~--E~laVN~~~~Lh~l~~~~~~~~~~L~-~ir~L~P~vvvl~E~ 289 (424)
+...++ +.++.|.. .++....++. ..+.|+|.-.++++.
T Consensus 140 ~~~~~~~~~D~V~~~~~--------~~~~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 140 KYRMLIAMVDVIFADVA--------QPDQTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp GGGGGCCCEEEEEECCC--------CTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcccCCcEEEEEEcCC--------CccHHHHHHHHHHHHcCCCeEEEEEE
Confidence 221222 34444332 2334445565 778999988777753
No 167
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=33.56 E-value=1.2e+02 Score=27.39 Aligned_cols=101 Identities=9% Similarity=0.122 Sum_probs=54.9
Q ss_pred eEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--eEEEEEecCC-Ccc
Q 043031 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--FPFNISFLTD-IKD 242 (424)
Q Consensus 166 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--FeF~~v~~~~-l~~ 242 (424)
-.|+|+|.|.|.-- ..||.+- ||. -+||+ |+. +...++.+.++ ++..|++ .+|..-...+ +..
T Consensus 65 ~~VLdiG~G~G~~~----~~la~~~--~~~-~~v~~-vD~--s~~~~~~a~~~----~~~~g~~~~v~~~~~d~~~~l~~ 130 (248)
T 3tfw_A 65 KRILEIGTLGGYST----IWMAREL--PAD-GQLLT-LEA--DAHHAQVAREN----LQLAGVDQRVTLREGPALQSLES 130 (248)
T ss_dssp SEEEEECCTTSHHH----HHHHTTS--CTT-CEEEE-EEC--CHHHHHHHHHH----HHHTTCTTTEEEEESCHHHHHHT
T ss_pred CEEEEecCCchHHH----HHHHHhC--CCC-CEEEE-EEC--CHHHHHHHHHH----HHHcCCCCcEEEEEcCHHHHHHh
Confidence 47999999988533 3455442 333 68999 874 66666655544 3445665 4444321111 111
Q ss_pred cc-cCCCcEEEEeccccccccCCCcchHHHHHHH-HHhcCCCeEEEEee
Q 043031 243 FE-TNEGEVVAVYSPVHLSHMIRKPNCLETFLTE-LRKINPCVMVVIEV 289 (424)
Q Consensus 243 l~-~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvl~E~ 289 (424)
+. ...=+.|+++.. ......+|+. .+.|+|.-+++++.
T Consensus 131 ~~~~~~fD~V~~d~~---------~~~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 131 LGECPAFDLIFIDAD---------KPNNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp CCSCCCCSEEEECSC---------GGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred cCCCCCeEEEEECCc---------hHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 21 112245655442 1123345544 57789998888753
No 168
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=32.97 E-value=1.1e+02 Score=25.30 Aligned_cols=52 Identities=17% Similarity=0.241 Sum_probs=32.2
Q ss_pred HHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHH
Q 043031 156 VIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLA 220 (424)
Q Consensus 156 IleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~ 220 (424)
+++.+.-.+.-+|+|+|.|.|. +...++.+. .++|| ++. +...++.+.+++.
T Consensus 25 ~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~------~~v~~-~D~--~~~~~~~a~~~~~ 76 (192)
T 1l3i_A 25 IMCLAEPGKNDVAVDVGCGTGG----VTLELAGRV------RRVYA-IDR--NPEAISTTEMNLQ 76 (192)
T ss_dssp HHHHHCCCTTCEEEEESCTTSH----HHHHHHTTS------SEEEE-EES--CHHHHHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCCCH----HHHHHHHhc------CEEEE-EEC--CHHHHHHHHHHHH
Confidence 3333333444589999998874 444555542 37999 874 6666666655543
No 169
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=31.77 E-value=1.1e+02 Score=27.51 Aligned_cols=101 Identities=9% Similarity=0.107 Sum_probs=53.9
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcccc
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFE 244 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~ 244 (424)
.-+|+|+|.|.|. ....++++ .|. ++|| |+. +...++. ..+.++..+....|......++. ..
T Consensus 61 G~rVLdiG~G~G~----~~~~~~~~---~~~--~v~~-id~--~~~~~~~----a~~~~~~~~~~~~~~~~~a~~~~-~~ 123 (236)
T 3orh_A 61 GGRVLEVGFGMAI----AASKVQEA---PID--EHWI-IEC--NDGVFQR----LRDWAPRQTHKVIPLKGLWEDVA-PT 123 (236)
T ss_dssp CEEEEEECCTTSH----HHHHHTTS---CEE--EEEE-EEC--CHHHHHH----HHHHGGGCSSEEEEEESCHHHHG-GG
T ss_pred CCeEEEECCCccH----HHHHHHHh---CCc--EEEE-EeC--CHHHHHH----HHHHHhhCCCceEEEeehHHhhc-cc
Confidence 3579999998883 33445554 243 7899 885 5554443 34456667766555433211111 11
Q ss_pred cCCC--cEEEEe---ccccccccCCCcchHHHHHHH-HHhcCCCeEEE
Q 043031 245 TNEG--EVVAVY---SPVHLSHMIRKPNCLETFLTE-LRKINPCVMVV 286 (424)
Q Consensus 245 ~~~~--E~laVN---~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvl 286 (424)
..++ +.+... +...++|+.+ .+.+++. .|-|+|.-+.+
T Consensus 124 ~~~~~FD~i~~D~~~~~~~~~~~~~----~~~~~~e~~rvLkPGG~l~ 167 (236)
T 3orh_A 124 LPDGHFDGILYDTYPLSEETWHTHQ----FNFIKNHAFRLLKPGGVLT 167 (236)
T ss_dssp SCTTCEEEEEECCCCCBGGGTTTHH----HHHHHHTHHHHEEEEEEEE
T ss_pred ccccCCceEEEeeeecccchhhhcc----hhhhhhhhhheeCCCCEEE
Confidence 2222 234333 2334444432 4567764 47789987654
No 170
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=31.52 E-value=52 Score=31.52 Aligned_cols=129 Identities=11% Similarity=0.095 Sum_probs=65.7
Q ss_pred eEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhC-CCceEEEEEecCCCcc-c
Q 043031 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETI-NLPFPFNISFLTDIKD-F 243 (424)
Q Consensus 166 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~l-gvpFeF~~v~~~~l~~-l 243 (424)
-+|+|+|.|.|. +...|+.+ +| .-+||+ |+. +...++.+.+++.+.+..+ +-.++| +. .+..+ +
T Consensus 110 ~~VLdIG~G~G~----~~~~l~~~---~~-~~~v~~-vDi--d~~~i~~Ar~~~~~~~~~~~~~rv~~--~~-~D~~~~l 175 (314)
T 2b2c_A 110 KRVLIIGGGDGG----ILREVLKH---ES-VEKVTM-CEI--DEMVIDVAKKFLPGMSCGFSHPKLDL--FC-GDGFEFL 175 (314)
T ss_dssp CEEEEESCTTSH----HHHHHTTC---TT-CCEEEE-ECS--CHHHHHHHHHHCTTTSGGGGCTTEEE--EC-SCHHHHH
T ss_pred CEEEEEcCCcCH----HHHHHHHc---CC-CCEEEE-EEC--CHHHHHHHHHHHHHhccccCCCCEEE--EE-ChHHHHH
Confidence 479999999885 55566655 23 368999 874 6666766666554322211 112333 22 23222 2
Q ss_pred ccCCC--cEEEEeccccccccCCCcchH--HHHHHHH-HhcCCCeEEEEeeeCCCCCCchHHHHHHHHHHHHHHHHh
Q 043031 244 ETNEG--EVVAVYSPVHLSHMIRKPNCL--ETFLTEL-RKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDC 315 (424)
Q Consensus 244 ~~~~~--E~laVN~~~~Lh~l~~~~~~~--~~~L~~i-r~L~P~vvvl~E~ea~~ns~~F~~RF~eaL~~YsalFDs 315 (424)
.-.++ +++++|... ++.. +..+ ..+++.+ +.|+|.-+++++.+.-.. -.+.+.....+...+|..
T Consensus 176 ~~~~~~fD~Ii~d~~~---~~~~-~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~---~~~~~~~~~~~l~~vF~~ 245 (314)
T 2b2c_A 176 KNHKNEFDVIITDSSD---PVGP-AESLFGQSYYELLRDALKEDGILSSQGESVWL---HLPLIAHLVAFNRKIFPA 245 (314)
T ss_dssp HHCTTCEEEEEECCC-----------------HHHHHHHHEEEEEEEEEECCCTTT---CHHHHHHHHHHHHHHCSE
T ss_pred HhcCCCceEEEEcCCC---CCCc-chhhhHHHHHHHHHhhcCCCeEEEEECCCccc---CHHHHHHHHHHHHHHCCc
Confidence 21122 567776642 2211 1111 4566655 678999888887532211 123455555555566653
No 171
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=29.87 E-value=1.6e+02 Score=27.53 Aligned_cols=108 Identities=11% Similarity=0.185 Sum_probs=60.5
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCC-ceEEEEEecCCCcc-
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINL-PFPFNISFLTDIKD- 242 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgv-pFeF~~v~~~~l~~- 242 (424)
.-.|+|+|.|.|. +...|+.+ +| .-+||+ |+. +...++.+.+++...++.++- .++|.. .+..+
T Consensus 96 ~~~VLdiG~G~G~----~~~~l~~~---~~-~~~v~~-vDi--d~~~i~~a~~~~~~~~~~~~~~~v~~~~---~D~~~~ 161 (304)
T 3bwc_A 96 PERVLIIGGGDGG----VLREVLRH---GT-VEHCDL-VDI--DGEVMEQSKQHFPQISRSLADPRATVRV---GDGLAF 161 (304)
T ss_dssp CCEEEEEECTTSH----HHHHHHTC---TT-CCEEEE-EES--CHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHH
T ss_pred CCeEEEEcCCCCH----HHHHHHhC---CC-CCEEEE-EEC--CHHHHHHHHHHhHHhhcccCCCcEEEEE---CcHHHH
Confidence 3579999999885 55666655 23 358999 884 777777777777665554321 233322 23222
Q ss_pred ccc-CCC--cEEEEeccccccccCCCcchH--HHHHHHH-HhcCCCeEEEEeee
Q 043031 243 FET-NEG--EVVAVYSPVHLSHMIRKPNCL--ETFLTEL-RKINPCVMVVIEVE 290 (424)
Q Consensus 243 l~~-~~~--E~laVN~~~~Lh~l~~~~~~~--~~~L~~i-r~L~P~vvvl~E~e 290 (424)
+.- .++ +++++|+.. +... ...+ ..+++.+ +.|+|.-++++..+
T Consensus 162 ~~~~~~~~fDvIi~d~~~--~~~~--~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 162 VRQTPDNTYDVVIIDTTD--PAGP--ASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp HHSSCTTCEEEEEEECC-------------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHhccCCceeEEEECCCC--cccc--chhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 111 122 577777654 2211 1111 4667655 77899887777643
No 172
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=29.74 E-value=3.3e+02 Score=24.90 Aligned_cols=96 Identities=11% Similarity=0.123 Sum_probs=50.4
Q ss_pred EEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcccccC
Q 043031 167 HIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFETN 246 (424)
Q Consensus 167 HIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~~~ 246 (424)
.|+|+|.|.|.- -..+|.+ |+. ++|| |+. +...++.+.++ ++..|++=....+. .+..++...
T Consensus 128 ~VLDlgcG~G~~----~~~la~~--~~~---~V~~-vD~--s~~~~~~a~~n----~~~n~~~~~v~~~~-~D~~~~~~~ 190 (278)
T 2frn_A 128 LVVDMFAGIGHL----SLPIAVY--GKA---KVIA-IEK--DPYTFKFLVEN----IHLNKVEDRMSAYN-MDNRDFPGE 190 (278)
T ss_dssp EEEETTCTTTTT----HHHHHHH--TCC---EEEE-ECC--CHHHHHHHHHH----HHHTTCTTTEEEEC-SCTTTCCCC
T ss_pred EEEEecccCCHH----HHHHHHh--CCC---EEEE-EEC--CHHHHHHHHHH----HHHcCCCceEEEEE-CCHHHhccc
Confidence 689999999953 2334443 332 7999 885 66666666554 44556651122232 233332111
Q ss_pred -CCcEEEEeccccccccCCCcchHHHHH-HHHHhcCCCeEEEEee
Q 043031 247 -EGEVVAVYSPVHLSHMIRKPNCLETFL-TELRKINPCVMVVIEV 289 (424)
Q Consensus 247 -~~E~laVN~~~~Lh~l~~~~~~~~~~L-~~ir~L~P~vvvl~E~ 289 (424)
.=+.+++|.+.. ...++ ...+.|+|.-++++..
T Consensus 191 ~~fD~Vi~~~p~~----------~~~~l~~~~~~LkpgG~l~~~~ 225 (278)
T 2frn_A 191 NIADRILMGYVVR----------THEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp SCEEEEEECCCSS----------GGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCccEEEECCchh----------HHHHHHHHHHHCCCCeEEEEEE
Confidence 113555553321 12344 3567789976555533
No 173
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=29.41 E-value=2.1e+02 Score=27.19 Aligned_cols=110 Identities=15% Similarity=0.177 Sum_probs=59.4
Q ss_pred HHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc-eEEEE
Q 043031 156 VIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP-FPFNI 234 (424)
Q Consensus 156 IleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp-FeF~~ 234 (424)
++....-.+.-.|+|.+.|.|. +.-.+|.+. +|. .+|+| ++. +...++.+.+++ +..|++ .+|..
T Consensus 195 l~~~~~~~~~~~vLD~gcGsG~----~~ie~a~~~-~~~--~~v~g-~Di--~~~~i~~a~~n~----~~~g~~~i~~~~ 260 (354)
T 3tma_A 195 LLRLADARPGMRVLDPFTGSGT----IALEAASTL-GPT--SPVYA-GDL--DEKRLGLAREAA----LASGLSWIRFLR 260 (354)
T ss_dssp HHHHTTCCTTCCEEESSCTTSH----HHHHHHHHH-CTT--SCEEE-EES--CHHHHHHHHHHH----HHTTCTTCEEEE
T ss_pred HHHHhCCCCCCEEEeCCCCcCH----HHHHHHHhh-CCC--ceEEE-EEC--CHHHHHHHHHHH----HHcCCCceEEEe
Confidence 3443433344579999999985 444455542 232 58999 874 666676666553 455765 33333
Q ss_pred EecCCCccccc--CCCcEEEEeccccccccCCCcc---hHHHHHHHH-HhcCCCe
Q 043031 235 SFLTDIKDFET--NEGEVVAVYSPVHLSHMIRKPN---CLETFLTEL-RKINPCV 283 (424)
Q Consensus 235 v~~~~l~~l~~--~~~E~laVN~~~~Lh~l~~~~~---~~~~~L~~i-r~L~P~v 283 (424)
- +..++.. ..-++++.|-++..+ +.+... -...+++.+ +.|+|.-
T Consensus 261 ~---D~~~~~~~~~~~D~Ii~npPyg~r-~~~~~~~~~~~~~~~~~~~~~LkpgG 311 (354)
T 3tma_A 261 A---DARHLPRFFPEVDRILANPPHGLR-LGRKEGLFHLYWDFLRGALALLPPGG 311 (354)
T ss_dssp C---CGGGGGGTCCCCSEEEECCCSCC-----CHHHHHHHHHHHHHHHHTSCTTC
T ss_pred C---ChhhCccccCCCCEEEECCCCcCc-cCCcccHHHHHHHHHHHHHHhcCCCc
Confidence 2 3333222 222688889887543 221111 124566655 4567843
No 174
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=29.24 E-value=76 Score=27.20 Aligned_cols=95 Identities=14% Similarity=0.132 Sum_probs=53.1
Q ss_pred eEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc-eEEEEEecCCCcccc
Q 043031 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP-FPFNISFLTDIKDFE 244 (424)
Q Consensus 166 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp-FeF~~v~~~~l~~l~ 244 (424)
-+|+|+|.|.|.--..|. .+. |. .++|| |+. +...++.+.++ ++..|++ .+|..- ++.++.
T Consensus 67 ~~vLDiG~G~G~~~~~l~----~~~---~~-~~v~~-vD~--s~~~~~~a~~~----~~~~~~~~v~~~~~---d~~~~~ 128 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLS----IVR---PE-AHFTL-LDS--LGKRVRFLRQV----QHELKLENIEPVQS---RVEEFP 128 (207)
T ss_dssp SEEEEETCTTTTTHHHHH----HHC---TT-SEEEE-EES--CHHHHHHHHHH----HHHTTCSSEEEEEC---CTTTSC
T ss_pred CeEEEECCCCCHHHHHHH----HHC---CC-CEEEE-EeC--CHHHHHHHHHH----HHHcCCCCeEEEec---chhhCC
Confidence 489999999997544443 332 22 58999 874 56666555444 3445664 555433 333322
Q ss_pred cCCC--cEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEEee
Q 043031 245 TNEG--EVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVIEV 289 (424)
Q Consensus 245 ~~~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~E~ 289 (424)
.++ +.++.|. + .....+++.+ +.|+|.-.++++.
T Consensus 129 -~~~~~D~i~~~~---~-------~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 129 -SEPPFDGVISRA---F-------ASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp -CCSCEEEEECSC---S-------SSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred -ccCCcCEEEEec---c-------CCHHHHHHHHHHhcCCCcEEEEEe
Confidence 112 2333322 1 1245667666 5579987777763
No 175
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=29.23 E-value=38 Score=29.03 Aligned_cols=53 Identities=23% Similarity=0.357 Sum_probs=27.7
Q ss_pred HHhhhcC-CCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHH
Q 043031 156 VIENVSS-AKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRL 219 (424)
Q Consensus 156 IleA~~g-~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL 219 (424)
+++.+.. .+.-+|+|+|.|.|. +...|+.+ + | ..++|| |+. +...++.+.+++
T Consensus 21 ~~~~l~~~~~~~~vLDiG~G~G~----~~~~l~~~--~-~-~~~v~~-vD~--~~~~~~~a~~~~ 74 (215)
T 4dzr_A 21 AIRFLKRMPSGTRVIDVGTGSGC----IAVSIALA--C-P-GVSVTA-VDL--SMDALAVARRNA 74 (215)
T ss_dssp HHHHHTTCCTTEEEEEEESSBCH----HHHHHHHH--C-T-TEEEEE-EEC--C-----------
T ss_pred HHHHhhhcCCCCEEEEecCCHhH----HHHHHHHh--C-C-CCeEEE-EEC--CHHHHHHHHHHH
Confidence 3444443 566799999999995 44455554 2 3 268999 875 455555554443
No 176
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=29.15 E-value=1.1e+02 Score=28.39 Aligned_cols=106 Identities=10% Similarity=0.100 Sum_probs=57.3
Q ss_pred eEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhC--------CCceEEEEEec
Q 043031 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETI--------NLPFPFNISFL 237 (424)
Q Consensus 166 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~l--------gvpFeF~~v~~ 237 (424)
-+|+|+|.|.|. +...++.+ |. -+||+ |+. +...++.+.+++ +.+..+ +-.+++ +.
T Consensus 77 ~~VLdiG~G~G~----~~~~l~~~---~~--~~v~~-vDi--d~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~--~~- 140 (281)
T 1mjf_A 77 KRVLVIGGGDGG----TVREVLQH---DV--DEVIM-VEI--DEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKL--TI- 140 (281)
T ss_dssp CEEEEEECTTSH----HHHHHTTS---CC--SEEEE-EES--CHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEE--EE-
T ss_pred CeEEEEcCCcCH----HHHHHHhC---CC--CEEEE-EEC--CHHHHHHHHHHH-hhccccccccccCCCCcEEE--EE-
Confidence 479999999883 55666665 22 48999 874 666777666665 332111 112333 32
Q ss_pred CCCcc-ccc-CCCcEEEEeccccccccCCCcch--HHHHHHHH-HhcCCCeEEEEeeeC
Q 043031 238 TDIKD-FET-NEGEVVAVYSPVHLSHMIRKPNC--LETFLTEL-RKINPCVMVVIEVES 291 (424)
Q Consensus 238 ~~l~~-l~~-~~~E~laVN~~~~Lh~l~~~~~~--~~~~L~~i-r~L~P~vvvl~E~ea 291 (424)
.+..+ +.- ..=++++++..... . .+.. ...+++.+ +.|+|.-++++....
T Consensus 141 ~D~~~~l~~~~~fD~Ii~d~~~~~---~-~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 141 GDGFEFIKNNRGFDVIIADSTDPV---G-PAKVLFSEEFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp SCHHHHHHHCCCEEEEEEECCCCC---------TTSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CchHHHhcccCCeeEEEECCCCCC---C-cchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 22222 211 11256777765321 1 1111 24566655 678999888887543
No 177
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=28.05 E-value=73 Score=23.78 Aligned_cols=34 Identities=24% Similarity=0.387 Sum_probs=21.7
Q ss_pred ceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEE
Q 043031 196 LLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNI 234 (424)
Q Consensus 196 ~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~ 234 (424)
-+|||| | +.+.-.+..+.-...|+.+||...|..
T Consensus 43 eiritg-v----peqvrkelakeaerlakefnitvtyti 76 (85)
T 2kl8_A 43 EIRITG-V----PEQVRKELAKEAERLAKEFNITVTYTI 76 (85)
T ss_dssp EEEEES-C----CHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred EEEEec-C----hHHHHHHHHHHHHHHHHhcCeEEEEEE
Confidence 489999 5 344444444555556778888777653
No 178
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=27.29 E-value=2.4e+02 Score=22.51 Aligned_cols=73 Identities=11% Similarity=0.083 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHhCCCceEEEEEecCCCcccccCCCcEEEEeccccccccCCCcc-hHHHHHHHHHh-cCCCeEEEE
Q 043031 211 KFEEIENRLANFAETINLPFPFNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPN-CLETFLTELRK-INPCVMVVI 287 (424)
Q Consensus 211 ~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~~~~~E~laVN~~~~Lh~l~~~~~-~~~~~L~~ir~-L~P~vvvl~ 287 (424)
.-+.+.+.+.+-++..|+..+...+...+.. .+...+.|++=++-.-.... |+ ....|++.+.. ++-+.+.+.
T Consensus 11 nT~~iA~~ia~~l~~~g~~v~~~~~~~~~~~--~l~~~d~iiig~pty~~g~~--p~~~~~~fl~~l~~~l~~k~~~~f 85 (138)
T 5nul_A 11 NTEKMAELIAKGIIESGKDVNTINVSDVNID--ELLNEDILILGCSAMTDEVL--EESEFEPFIEEISTKISGKKVALF 85 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEGGGCCHH--HHTTCSEEEEEECCBTTTBC--CTTTHHHHHHHHGGGCTTCEEEEE
T ss_pred hHHHHHHHHHHHHHHCCCeEEEEEhhhCCHH--HHhhCCEEEEEcCccCCCCC--ChHHHHHHHHHHHhhcCCCEEEEE
Confidence 3566777888888888887665554322222 23455677776665433322 33 57889998876 554444443
No 179
>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}
Probab=27.19 E-value=54 Score=27.98 Aligned_cols=39 Identities=18% Similarity=0.195 Sum_probs=31.4
Q ss_pred cccHHHHHHHHHHHHhcCCHHHHHHHHHHhcccCCCCCCh
Q 043031 46 GVELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNP 85 (424)
Q Consensus 46 ~~~L~~LLl~cA~Av~~g~~~~A~~lL~~l~~las~~G~~ 85 (424)
.-++.+-|-+|++++++||.+.|+.||..-. +.-|+||-
T Consensus 55 r~EIW~ALraA~~~~e~~Dl~tAQ~IldaAg-Itvp~gdL 93 (137)
T 2ksn_A 55 RKEIWDALKAAAHAFESNDHELAQAIIDGAN-ITLPHGAL 93 (137)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHS-CBCSSCCS
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHcC-CcccCCcH
Confidence 3458899999999999999999999997654 34467764
No 180
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=26.35 E-value=1.7e+02 Score=25.44 Aligned_cols=50 Identities=10% Similarity=0.021 Sum_probs=31.3
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCC--CCCcceEEEEEeCCCCCHHHHHHHHHHHHH
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQG--CPPELLKITMVVGTTPSKQKFEEIENRLAN 221 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~g--gpP~~LRIT~~i~~~~~~~~l~~tg~rL~~ 221 (424)
+.-+|+|+|.|.|..- ..|+.+.+ ..| ..++|| |+. +...++.+.+++.+
T Consensus 80 ~~~~VLdiG~G~G~~~----~~la~~~~~~~~~-~~~v~~-vD~--~~~~~~~a~~~~~~ 131 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLT----VCMAIKMNVLENK-NSYVIG-LER--VKDLVNFSLENIKR 131 (227)
T ss_dssp TTCEEEEESCTTSHHH----HHHHHHTTTTTCT-TCEEEE-EES--CHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHH----HHHHHHhcccCCC-CCEEEE-EeC--CHHHHHHHHHHHHH
Confidence 3458999999988533 33444321 114 268999 874 67777777666554
No 181
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=26.27 E-value=73 Score=26.26 Aligned_cols=50 Identities=18% Similarity=0.291 Sum_probs=33.6
Q ss_pred eEEEeccCC-CCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCce
Q 043031 166 IHIIDLATR-TGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPF 230 (424)
Q Consensus 166 VHIIDf~i~-~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpF 230 (424)
-=|||++-- ...+|..|++.|..+ -|++-||.+. +.. ++.+.|+..|+|+
T Consensus 49 PVVlDl~~l~~~~dl~~L~~~l~~~------gl~~vGV~g~--~~~-------~~~~~a~~~GLp~ 99 (120)
T 3ghf_A 49 PVVINVSGLESPVNWPELHKIVTST------GLRIIGVSGC--KDA-------SLKVEIDRMGLPL 99 (120)
T ss_dssp EEEEEEEECCSSCCHHHHHHHHHTT------TCEEEEEESC--CCH-------HHHHHHHHHTCCE
T ss_pred cEEEEccccCChHHHHHHHHHHHHc------CCEEEEEeCC--CcH-------HHHHHHHHCCCCc
Confidence 347888743 468999999999877 2788884442 211 2345677779884
No 182
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens}
Probab=26.16 E-value=36 Score=33.98 Aligned_cols=24 Identities=17% Similarity=0.321 Sum_probs=18.0
Q ss_pred HHhhhcCCCeeEEEeccCCCC--CCh
Q 043031 156 VIENVSSAKKIHIIDLATRTG--SHC 179 (424)
Q Consensus 156 IleA~~g~~~VHIIDf~i~~G--~QW 179 (424)
|..+.+..+||=|||+|+.|| .|+
T Consensus 154 a~~l~~~~~RV~ivD~DvHHGnGtq~ 179 (376)
T 4a69_A 154 ILELLKYHPRVLYIDIDIHHGDGVQE 179 (376)
T ss_dssp HHHHTTTCSCEEEEECSSSCCHHHHH
T ss_pred HHHHHHhCCcEEEEeccCCCCcchhh
Confidence 444555568999999999876 665
No 183
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=26.09 E-value=1.9e+02 Score=25.05 Aligned_cols=103 Identities=12% Similarity=0.212 Sum_probs=55.6
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEE
Q 043031 155 AVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNI 234 (424)
Q Consensus 155 aIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~ 234 (424)
.+++.+.-.+.-+|+|+|.|.|. +...|+.+ + -++|| |+. +...++.+.+++ +..| ..+|..
T Consensus 61 ~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~----~~v~~-vD~--~~~~~~~a~~~~----~~~~-~v~~~~ 122 (231)
T 1vbf_A 61 FMLDELDLHKGQKVLEIGTGIGY----YTALIAEI--V----DKVVS-VEI--NEKMYNYASKLL----SYYN-NIKLIL 122 (231)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSH----HHHHHHHH--S----SEEEE-EES--CHHHHHHHHHHH----TTCS-SEEEEE
T ss_pred HHHHhcCCCCCCEEEEEcCCCCH----HHHHHHHH--c----CEEEE-EeC--CHHHHHHHHHHH----hhcC-CeEEEE
Confidence 34444443444589999999876 33345544 2 27999 874 666666655554 3334 333332
Q ss_pred EecCCCcc-ccc-CCCcEEEEeccccccccCCCcchHHHHHHHHHhcCCCeEEEEee
Q 043031 235 SFLTDIKD-FET-NEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEV 289 (424)
Q Consensus 235 v~~~~l~~-l~~-~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvl~E~ 289 (424)
. +..+ +.. .+=+.++++. .+||+.+ ...+.|+|.-.+++..
T Consensus 123 ~---d~~~~~~~~~~fD~v~~~~--~~~~~~~---------~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 123 G---DGTLGYEEEKPYDRVVVWA--TAPTLLC---------KPYEQLKEGGIMILPI 165 (231)
T ss_dssp S---CGGGCCGGGCCEEEEEESS--BBSSCCH---------HHHHTEEEEEEEEEEE
T ss_pred C---CcccccccCCCccEEEECC--cHHHHHH---------HHHHHcCCCcEEEEEE
Confidence 2 3222 211 1113454444 4577652 3557889976665543
No 184
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=26.08 E-value=1.8e+02 Score=26.39 Aligned_cols=46 Identities=20% Similarity=0.026 Sum_probs=27.9
Q ss_pred HHHHHHHHhcCCCeEEEEeeeC-------------CCC-CCchHHHHHHHHHHHHHHHHh
Q 043031 270 ETFLTELRKINPCVMVVIEVES-------------NDN-LQTFEDRFFGTLFHFGALFDC 315 (424)
Q Consensus 270 ~~~L~~ir~L~P~vvvl~E~ea-------------~~n-s~~F~~RF~eaL~~YsalFDs 315 (424)
+.+++.+++++|++++++---- --| .|+++.+|..+--+.+|+.+-
T Consensus 72 ~~~~~~L~~~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G 131 (215)
T 3kcq_A 72 EHISTVLREHDVDLVCLAGFMSILPEKFVTDWHHKIINIHPSLLPSFKGLNAQEQAYKAG 131 (215)
T ss_dssp HHHHHHHHHTTCSEEEESSCCSCCCHHHHHHTTTSEEEEESSCTTTTCSSCHHHHHHHHT
T ss_pred HHHHHHHHHhCCCEEEEeCCceEeCHHHHhhccCCeEEECcccccCCCCccHHHHHHHcC
Confidence 4677788888888888764310 011 356666666666666666544
No 185
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=25.24 E-value=87 Score=28.45 Aligned_cols=53 Identities=17% Similarity=0.299 Sum_probs=35.1
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHH
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRL 219 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL 219 (424)
+.|++++.-.+.-+|+|+|.|.|. +...|+.+. -++|| |+. +...++.+.+++
T Consensus 20 ~~i~~~~~~~~~~~VLDiG~G~G~----lt~~l~~~~------~~v~~-vD~--~~~~~~~a~~~~ 72 (244)
T 1qam_A 20 DKIMTNIRLNEHDNIFEIGSGKGH----FTLELVQRC------NFVTA-IEI--DHKLCKTTENKL 72 (244)
T ss_dssp HHHHTTCCCCTTCEEEEECCTTSH----HHHHHHHHS------SEEEE-ECS--CHHHHHHHHHHT
T ss_pred HHHHHhCCCCCCCEEEEEeCCchH----HHHHHHHcC------CeEEE-EEC--CHHHHHHHHHhh
Confidence 456666654445689999999886 555666652 37999 874 666665555544
No 186
>3max_A HD2, histone deacetylase 2; class 2, HDAC, foot pocket, hydrolase; HET: LLX NHE; 2.05A {Homo sapiens}
Probab=25.10 E-value=39 Score=33.64 Aligned_cols=24 Identities=17% Similarity=0.339 Sum_probs=17.6
Q ss_pred HHhhhcCCCeeEEEeccCCCC--CCh
Q 043031 156 VIENVSSAKKIHIIDLATRTG--SHC 179 (424)
Q Consensus 156 IleA~~g~~~VHIIDf~i~~G--~QW 179 (424)
|..+.+..+||=|||+|+.|| .|+
T Consensus 154 a~~l~~~~~RV~ivD~DvHHGnGtq~ 179 (367)
T 3max_A 154 ILELLKYHQRVLYIDIDIHHGDGVEE 179 (367)
T ss_dssp HHHHTTTCSCEEEEECSSSCCHHHHH
T ss_pred HHHHHHcCCcEEEEecCCCCCchhhH
Confidence 344455568999999999876 554
No 187
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=24.79 E-value=2.1e+02 Score=27.00 Aligned_cols=85 Identities=15% Similarity=0.200 Sum_probs=48.8
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEE
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFN 233 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~ 233 (424)
..|++++.-.+.-+|+|+|.|.|. |-..|+.+ + -++|| |+. +...++.+.+++. ..+ . ++
T Consensus 40 ~~Iv~~l~~~~~~~VLEIG~G~G~----lT~~La~~-~-----~~V~a-VEi--d~~li~~a~~~~~----~~~-~--v~ 99 (295)
T 3gru_A 40 NKAVESANLTKDDVVLEIGLGKGI----LTEELAKN-A-----KKVYV-IEI--DKSLEPYANKLKE----LYN-N--IE 99 (295)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSH----HHHHHHHH-S-----SEEEE-EES--CGGGHHHHHHHHH----HCS-S--EE
T ss_pred HHHHHhcCCCCcCEEEEECCCchH----HHHHHHhc-C-----CEEEE-EEC--CHHHHHHHHHHhc----cCC-C--eE
Confidence 456666655555689999999986 44555555 1 27999 874 5555655555544 111 2 23
Q ss_pred EEecCCCcccccC--CCcEEEEeccccc
Q 043031 234 ISFLTDIKDFETN--EGEVVAVYSPVHL 259 (424)
Q Consensus 234 ~v~~~~l~~l~~~--~~E~laVN~~~~L 259 (424)
.+. .|..++... +-++++.|.++..
T Consensus 100 vi~-gD~l~~~~~~~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 100 IIW-GDALKVDLNKLDFNKVVANLPYQI 126 (295)
T ss_dssp EEE-SCTTTSCGGGSCCSEEEEECCGGG
T ss_pred EEE-CchhhCCcccCCccEEEEeCcccc
Confidence 332 244332222 2357888887643
No 188
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=24.74 E-value=2e+02 Score=26.03 Aligned_cols=109 Identities=14% Similarity=0.061 Sum_probs=56.8
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEE
Q 043031 155 AVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNI 234 (424)
Q Consensus 155 aIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~ 234 (424)
.|++.+.-.+.-.|+|+|.|.|. +...|+.+- + |. .++|+ ++. +...++.+.+++. ..|++=....
T Consensus 103 ~i~~~~~~~~~~~VLDiG~G~G~----~~~~la~~~-~-~~-~~v~~-vD~--s~~~~~~a~~~~~----~~~~~~~v~~ 168 (277)
T 1o54_A 103 FIAMMLDVKEGDRIIDTGVGSGA----MCAVLARAV-G-SS-GKVFA-YEK--REEFAKLAESNLT----KWGLIERVTI 168 (277)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSH----HHHHHHHHT-T-TT-CEEEE-ECC--CHHHHHHHHHHHH----HTTCGGGEEE
T ss_pred HHHHHhCCCCCCEEEEECCcCCH----HHHHHHHHh-C-CC-cEEEE-EEC--CHHHHHHHHHHHH----HcCCCCCEEE
Confidence 45555543444589999999884 444555542 2 22 58999 874 6666666655543 3455212222
Q ss_pred EecCCCcccccCCC--cEEEEeccccccccCCCcchHHHHHHHHHhcCCCeEEEEee
Q 043031 235 SFLTDIKDFETNEG--EVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEV 289 (424)
Q Consensus 235 v~~~~l~~l~~~~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvl~E~ 289 (424)
+. .++.+. +.++ ++++.|. +++...+-...+.|+|.-.+++..
T Consensus 169 ~~-~d~~~~-~~~~~~D~V~~~~----------~~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 169 KV-RDISEG-FDEKDVDALFLDV----------PDPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp EC-CCGGGC-CSCCSEEEEEECC----------SCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred EE-CCHHHc-ccCCccCEEEECC----------cCHHHHHHHHHHHcCCCCEEEEEe
Confidence 22 233332 2222 3444332 222222333456789987776654
No 189
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=23.70 E-value=3.5e+02 Score=23.20 Aligned_cols=102 Identities=13% Similarity=0.175 Sum_probs=54.7
Q ss_pred eEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--eEEEEEecCC-Ccc
Q 043031 166 IHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--FPFNISFLTD-IKD 242 (424)
Q Consensus 166 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--FeF~~v~~~~-l~~ 242 (424)
-+|+|+|.|.|.- ...|+.+- ||. -++|+ |+. +...++.+.+++ +..|++ .+|..-...+ +.+
T Consensus 60 ~~vLdiG~G~G~~----~~~la~~~--~~~-~~v~~-vD~--~~~~~~~a~~~~----~~~~~~~~v~~~~~d~~~~~~~ 125 (223)
T 3duw_A 60 RNILEIGTLGGYS----TIWLARGL--SSG-GRVVT-LEA--SEKHADIARSNI----ERANLNDRVEVRTGLALDSLQQ 125 (223)
T ss_dssp SEEEEECCTTSHH----HHHHHTTC--CSS-CEEEE-EES--CHHHHHHHHHHH----HHTTCTTTEEEEESCHHHHHHH
T ss_pred CEEEEecCCccHH----HHHHHHhC--CCC-CEEEE-EEC--CHHHHHHHHHHH----HHcCCCCcEEEEEcCHHHHHHH
Confidence 4799999988842 33455542 333 58999 874 566666555544 445663 4443321111 111
Q ss_pred ccc---CCCcEEEEeccccccccCCCcchHHHHHHH-HHhcCCCeEEEEeee
Q 043031 243 FET---NEGEVVAVYSPVHLSHMIRKPNCLETFLTE-LRKINPCVMVVIEVE 290 (424)
Q Consensus 243 l~~---~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvl~E~e 290 (424)
+.- .+=+.++++... .....+|+. .+.|+|.-+++++.-
T Consensus 126 ~~~~~~~~fD~v~~d~~~---------~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 126 IENEKYEPFDFIFIDADK---------QNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp HHHTTCCCCSEEEECSCG---------GGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred HHhcCCCCcCEEEEcCCc---------HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 110 122455555431 123345554 478899998887643
No 190
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=23.48 E-value=3.2e+02 Score=24.66 Aligned_cols=113 Identities=13% Similarity=0.080 Sum_probs=60.7
Q ss_pred CCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--eEEEEEecCCC
Q 043031 163 AKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--FPFNISFLTDI 240 (424)
Q Consensus 163 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--FeF~~v~~~~l 240 (424)
.+.-+|+|+|.|.|. +...|+.+. | ..+||| |+. +...++.+.+++...+. .|++ .+|..- ++
T Consensus 35 ~~~~~VLDlG~G~G~----~~l~la~~~---~-~~~v~g-vDi--~~~~~~~a~~n~~~~~~-~~l~~~v~~~~~---D~ 99 (260)
T 2ozv_A 35 DRACRIADLGAGAGA----AGMAVAARL---E-KAEVTL-YER--SQEMAEFARRSLELPDN-AAFSARIEVLEA---DV 99 (260)
T ss_dssp CSCEEEEECCSSSSH----HHHHHHHHC---T-TEEEEE-EES--SHHHHHHHHHHTTSGGG-TTTGGGEEEEEC---CT
T ss_pred cCCCEEEEeCChHhH----HHHHHHHhC---C-CCeEEE-EEC--CHHHHHHHHHHHHhhhh-CCCcceEEEEeC---CH
Confidence 345689999999885 344566652 3 279999 874 66666666555432110 4454 444322 33
Q ss_pred ccc-------ccCCC--cEEEEeccccccc-cC-----------CCcchHHHHHHHH-HhcCCCeEEEEeee
Q 043031 241 KDF-------ETNEG--EVVAVYSPVHLSH-MI-----------RKPNCLETFLTEL-RKINPCVMVVIEVE 290 (424)
Q Consensus 241 ~~l-------~~~~~--E~laVN~~~~Lh~-l~-----------~~~~~~~~~L~~i-r~L~P~vvvl~E~e 290 (424)
.++ .+.++ +.|+.|-++.... .. ......+.+++.+ +-|+|.-.++++..
T Consensus 100 ~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 100 TLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp TCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 332 12222 5777786664321 00 0112255677655 67899877776543
No 191
>3ew8_A HD8, histone deacetylase 8; hydrolase, HDAC, metalloenzyme, arginase fold, HDAC8, histon deacetylase, hydroxamate inhibitor, unliganded; HET: B3N; 1.80A {Homo sapiens} SCOP: c.42.1.2 PDB: 3f06_A* 3ezp_A* 3ezt_A* 3f0r_A* 3f07_A* 2v5w_A* 2v5x_A* 3ewf_A* 3mz4_A* 3mz6_A* 3mz7_A* 3rqd_A* 3mz3_A* 1t64_A* 1t67_A* 1t69_A* 1vkg_A* 1w22_A* 3sff_A* 3sfh_A*
Probab=23.17 E-value=44 Score=33.50 Aligned_cols=24 Identities=17% Similarity=0.245 Sum_probs=18.0
Q ss_pred HHhhhcCCCeeEEEeccCCCC--CCh
Q 043031 156 VIENVSSAKKIHIIDLATRTG--SHC 179 (424)
Q Consensus 156 IleA~~g~~~VHIIDf~i~~G--~QW 179 (424)
|..+.++.+||=|||+|+.|| .|+
T Consensus 162 a~~l~~~~~RV~ivD~DvHHGnGtq~ 187 (388)
T 3ew8_A 162 ILRLRRKFERILYVDLDLHHGDGVED 187 (388)
T ss_dssp HHHHTTTCSCEEEEECSSSCCHHHHH
T ss_pred HHHHHhcCCeEEEEecCCCCChhHHH
Confidence 344455678999999999876 554
No 192
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=22.67 E-value=1.3e+02 Score=28.34 Aligned_cols=69 Identities=7% Similarity=0.124 Sum_probs=44.9
Q ss_pred hhhHHHHHHHHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHH
Q 043031 145 YQVTVFAGIQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFA 223 (424)
Q Consensus 145 ~kfa~~tANqaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA 223 (424)
.++.|-+....|++.+.-.+.-.|+|+|.|.|. +...|+.+. ||. -+++| |+. +...++.+.+++.++-
T Consensus 86 ~~~~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~----~~~~la~~~-g~~--~~v~~-vD~--~~~~~~~a~~~~~~~~ 154 (336)
T 2b25_A 86 TAITFPKDINMILSMMDINPGDTVLEAGSGSGG----MSLFLSKAV-GSQ--GRVIS-FEV--RKDHHDLAKKNYKHWR 154 (336)
T ss_dssp SCCCCHHHHHHHHHHHTCCTTCEEEEECCTTSH----HHHHHHHHH-CTT--CEEEE-EES--SHHHHHHHHHHHHHHH
T ss_pred CcccCHHHHHHHHHhcCCCCCCEEEEeCCCcCH----HHHHHHHHh-CCC--ceEEE-EeC--CHHHHHHHHHHHHHhh
Confidence 344555555667776654445589999999885 333444432 332 58999 874 7777888877777654
No 193
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=22.64 E-value=1.3e+02 Score=27.82 Aligned_cols=54 Identities=13% Similarity=0.361 Sum_probs=37.1
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHH
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLA 220 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~ 220 (424)
+.|++++.-.+.-+|+|+|.|.|. |-..|+.+ + -++|| |+. +...++.+.+++.
T Consensus 19 ~~iv~~~~~~~~~~VLEIG~G~G~----lt~~La~~--~----~~V~a-vEi--d~~~~~~~~~~~~ 72 (255)
T 3tqs_A 19 QKIVSAIHPQKTDTLVEIGPGRGA----LTDYLLTE--C----DNLAL-VEI--DRDLVAFLQKKYN 72 (255)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTTT----THHHHTTT--S----SEEEE-EEC--CHHHHHHHHHHHT
T ss_pred HHHHHhcCCCCcCEEEEEcccccH----HHHHHHHh--C----CEEEE-EEC--CHHHHHHHHHHHh
Confidence 346677665555689999999997 56667766 2 27999 874 6666666655543
No 194
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=22.14 E-value=1.2e+02 Score=27.00 Aligned_cols=57 Identities=14% Similarity=0.082 Sum_probs=36.4
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCc--eEEEEE
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLP--FPFNIS 235 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvp--FeF~~v 235 (424)
+.-+|+|+|.|.|.--..|.+.. |. .++|| |+. +...++.+.+++. ..|++ .+|..-
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-------~~-~~v~g-vD~--s~~~~~~a~~~~~----~~~~~~~v~~~~~ 123 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-------NG-WYFLA-TEV--DDMCFNYAKKNVE----QNNLSDLIKVVKV 123 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-------HC-CEEEE-EES--CHHHHHHHHHHHH----HTTCTTTEEEEEC
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-------CC-CeEEE-EEC--CHHHHHHHHHHHH----HcCCCccEEEEEc
Confidence 44689999999997555444332 11 58999 874 6677776666543 45664 555543
No 195
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=22.07 E-value=2.9e+02 Score=23.35 Aligned_cols=87 Identities=11% Similarity=0.192 Sum_probs=44.8
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcccc
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFE 244 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~ 244 (424)
.-+|+|+|.|.|. +...|+.+ | . -++|| |+. +...++.+.+++. + .+|..- +..++.
T Consensus 52 ~~~vlD~gcG~G~----~~~~l~~~--~-~--~~v~~-vD~--~~~~~~~a~~~~~------~--~~~~~~---d~~~~~ 108 (200)
T 1ne2_A 52 GRSVIDAGTGNGI----LACGSYLL--G-A--ESVTA-FDI--DPDAIETAKRNCG------G--VNFMVA---DVSEIS 108 (200)
T ss_dssp TSEEEEETCTTCH----HHHHHHHT--T-B--SEEEE-EES--CHHHHHHHHHHCT------T--SEEEEC---CGGGCC
T ss_pred CCEEEEEeCCccH----HHHHHHHc--C-C--CEEEE-EEC--CHHHHHHHHHhcC------C--CEEEEC---cHHHCC
Confidence 3479999999887 44556655 2 1 37999 884 6666666655543 3 333322 333332
Q ss_pred cCCCcEEEEeccccccccCCCcchHHHHHHHHHhc
Q 043031 245 TNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKI 279 (424)
Q Consensus 245 ~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L 279 (424)
..=++++.|.++ |++... ....+++.+.+.
T Consensus 109 -~~~D~v~~~~p~--~~~~~~--~~~~~l~~~~~~ 138 (200)
T 1ne2_A 109 -GKYDTWIMNPPF--GSVVKH--SDRAFIDKAFET 138 (200)
T ss_dssp -CCEEEEEECCCC-----------CHHHHHHHHHH
T ss_pred -CCeeEEEECCCc--hhccCc--hhHHHHHHHHHh
Confidence 122466767664 555331 122455555443
No 196
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=21.83 E-value=2.2e+02 Score=24.82 Aligned_cols=53 Identities=11% Similarity=0.184 Sum_probs=34.3
Q ss_pred eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHH
Q 043031 165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANF 222 (424)
Q Consensus 165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~f 222 (424)
.-+|+|+|.|.|..=..|.+.+... +..| .-++|+ |+. +...++.+.+++.+.
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~-~~~~-~~~v~~-vD~--~~~~~~~a~~~~~~~ 137 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAK-GVDA-DTRIVG-IEH--QAELVRRSKANLNTD 137 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHS-CCCT-TCEEEE-EES--CHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHHHhcccc-cCCc-cCEEEE-EEc--CHHHHHHHHHHHHhc
Confidence 3489999999887555444443321 2233 258999 874 677777777776654
No 197
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=21.56 E-value=5.1e+02 Score=24.31 Aligned_cols=84 Identities=13% Similarity=0.081 Sum_probs=48.8
Q ss_pred CCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCc
Q 043031 162 SAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIK 241 (424)
Q Consensus 162 g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~ 241 (424)
..+..+|+|.+.|.|.--..+.+.+.... + + ..+++| ++. +...++.+..++.. .|+..+ .+..+.+.
T Consensus 128 ~~~~~~VlDp~cGsG~~l~~~~~~~~~~~-~-~-~~~v~G-iDi--~~~~~~~a~~n~~~----~g~~~~--i~~~D~l~ 195 (344)
T 2f8l_A 128 KKKNVSILDPACGTANLLTTVINQLELKG-D-V-DVHASG-VDV--DDLLISLALVGADL----QRQKMT--LLHQDGLA 195 (344)
T ss_dssp TCSEEEEEETTCTTSHHHHHHHHHHHTTS-S-C-EEEEEE-EES--CHHHHHHHHHHHHH----HTCCCE--EEESCTTS
T ss_pred CCCCCEEEeCCCCccHHHHHHHHHHHHhc-C-C-CceEEE-EEC--CHHHHHHHHHHHHh----CCCCce--EEECCCCC
Confidence 34678999999999986666666664321 1 2 378999 874 55566655555432 255433 33222222
Q ss_pred ccccCCCcEEEEeccc
Q 043031 242 DFETNEGEVVAVYSPV 257 (424)
Q Consensus 242 ~l~~~~~E~laVN~~~ 257 (424)
......=+.++.|-+|
T Consensus 196 ~~~~~~fD~Ii~NPPf 211 (344)
T 2f8l_A 196 NLLVDPVDVVISDLPV 211 (344)
T ss_dssp CCCCCCEEEEEEECCC
T ss_pred ccccCCccEEEECCCC
Confidence 2211122577778886
No 198
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=21.35 E-value=1.9e+02 Score=25.47 Aligned_cols=57 Identities=12% Similarity=0.157 Sum_probs=35.6
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHH
Q 043031 155 AVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLAN 221 (424)
Q Consensus 155 aIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~ 221 (424)
.|++.+.-.+.-+|+|+|.|.|. +...|+.+- +| .-++|+ ++. +...++.+.+++..
T Consensus 87 ~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~~-~~--~~~v~~-~D~--~~~~~~~a~~~~~~ 143 (258)
T 2pwy_A 87 AMVTLLDLAPGMRVLEAGTGSGG----LTLFLARAV-GE--KGLVES-YEA--RPHHLAQAERNVRA 143 (258)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSH----HHHHHHHHH-CT--TSEEEE-EES--CHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEECCCcCH----HHHHHHHHh-CC--CCEEEE-EeC--CHHHHHHHHHHHHH
Confidence 45555544445589999999884 334444442 22 248999 874 66677766666544
No 199
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=20.63 E-value=2e+02 Score=25.82 Aligned_cols=59 Identities=7% Similarity=0.142 Sum_probs=37.6
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHH
Q 043031 154 QAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANF 222 (424)
Q Consensus 154 qaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~f 222 (424)
..|++.+.-...-.|+|+|.|.|. +...|+.+- +|. .++|+ ++. +...++.+.+++..+
T Consensus 89 ~~i~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~~-~~~--~~v~~-vD~--~~~~~~~a~~~~~~~ 147 (280)
T 1i9g_A 89 AQIVHEGDIFPGARVLEAGAGSGA----LTLSLLRAV-GPA--GQVIS-YEQ--RADHAEHARRNVSGC 147 (280)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSH----HHHHHHHHH-CTT--SEEEE-ECS--CHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEEcccccH----HHHHHHHHh-CCC--CEEEE-EeC--CHHHHHHHHHHHHHh
Confidence 355565544444579999999885 444555442 222 58999 874 677777777666544
No 200
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=20.35 E-value=1.9e+02 Score=25.04 Aligned_cols=48 Identities=13% Similarity=0.129 Sum_probs=30.8
Q ss_pred CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHH
Q 043031 164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLAN 221 (424)
Q Consensus 164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~ 221 (424)
+.-+|+|+|.|.|..-. .|+.+. | | ..++|+ |+. +...++.+.+++.+
T Consensus 77 ~~~~vLDiG~G~G~~~~----~la~~~-~-~-~~~v~~-vD~--s~~~~~~a~~~~~~ 124 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTA----CFARMV-G-C-TGKVIG-IDH--IKELVDDSVNNVRK 124 (226)
T ss_dssp TTCEEEEETCTTSHHHH----HHHHHH-C-T-TCEEEE-EES--CHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCcCHHHH----HHHHHh-C-C-CcEEEE-EeC--CHHHHHHHHHHHHh
Confidence 44589999999886433 344332 2 3 258999 874 66777766666544
No 201
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=20.29 E-value=5.7e+02 Score=24.96 Aligned_cols=97 Identities=14% Similarity=0.149 Sum_probs=50.2
Q ss_pred CeeEEEeccCCCCC----ChHHHHHHHHhcC---C-CCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhC---------
Q 043031 164 KKIHIIDLATRTGS----HCPAIMQALATRQ---G-CPPELLKITMVVGTTPSKQKFEEIENRLANFAETI--------- 226 (424)
Q Consensus 164 ~~VHIIDf~i~~G~----QWp~LiqaLa~R~---g-gpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~l--------- 226 (424)
+.+.|.|+|.+.|- -+-.+|+++..+. + .|| .++|.. -+.|.+ + ....-+.|..+-+++
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~p-e~~v~~-nDLp~N-D-Fn~lF~~L~~~~~~~~~~~~~~~~ 127 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPP-EFTAFF-SDLPSN-D-FNTLFQLLPPLVSNTCMEECLAAD 127 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCC-CEEEEE-EECTTS-C-HHHHHHHSCCBCCCC--CCC---C
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCC-ceeEEe-cCCCcc-c-hHHHHhhhhhhhhhcchhhhcccc
Confidence 36999999999994 4445555554432 2 256 488887 665322 2 233333444332211
Q ss_pred CCceEE-EEEecCCCccccc-CCCcEEEEeccccccccCCCc
Q 043031 227 NLPFPF-NISFLTDIKDFET-NEGEVVAVYSPVHLSHMIRKP 266 (424)
Q Consensus 227 gvpFeF-~~v~~~~l~~l~~-~~~E~laVN~~~~Lh~l~~~~ 266 (424)
+.+=-| ..|. .+.- .++ -++..=+|.+.+.||-|.+.|
T Consensus 128 ~~~~~f~~gvp-gSFy-~rlfP~~S~d~v~Ss~aLHWls~~p 167 (374)
T 3b5i_A 128 GNRSYFVAGVP-GSFY-RRLFPARTIDFFHSAFSLHWLSQVP 167 (374)
T ss_dssp CCBCSEEEEEE-SCTT-SCCSCTTCEEEEEEESCTTBCSSCC
T ss_pred CCCceEEEecC-hhhh-cccCCCcceEEEEecceeeeeccCc
Confidence 111112 2221 2221 122 234556778888899887544
Done!