BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043044
(132 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 43.1 bits (100), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 23 FVDEEYLPRLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFVNMYVEN 82
++D E L RLQ+L V+KE++R P A R E+ +I+G +P TP+ + YV
Sbjct: 293 YLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVP-GNTPLLFSTYVMG 351
Query: 83 KKGHTQVWDLNKFPRDFMNPSSNVELGRQNFELIPFGARRRIC 125
+ T D F D P + + F PF R C
Sbjct: 352 RM-DTYFEDPLTFNPDRFGPGAP----KPRFTYFPFSLGHRSC 389
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 39.3 bits (90), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 27 EYLPRLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFVNMYVENKKGH 86
E + +L+H V+ E MR +P +++R + + GY IPA ++ ++
Sbjct: 316 EDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDP-- 373
Query: 87 TQVWDLN-KFPRDFMNPSSNVELGRQNFELIPFGARRRICP 126
+ +D N +F D P + + + + PF A +R CP
Sbjct: 374 -KSYDDNLEFDPDRWLPERAANVPK--YAMKPFSAGKRKCP 411
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 38.1 bits (87), Expect = 0.001, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 35 LKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFVNMYVENKKGHTQVWDLNK 94
L+A +KET+R P+ + R + ++ Y IPA T V V +Y +
Sbjct: 339 LRAALKETLRLYPVGLFLERVVSSDLVLQNYHIPAG-TLVQVFLYSLGRNAAL------- 390
Query: 95 FPR-DFMNPSSNVEL---GRQNFELIPFGARRRIC 125
FPR + NP +++ GR NF +PFG R C
Sbjct: 391 FPRPERYNPQRWLDIRGSGR-NFHHVPFGFGMRQC 424
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Query: 27 EYLPRLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFVNMYVENKKGH 86
+ L L L +KET+R +P I+ R + GY IP V V+ V +
Sbjct: 307 DQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQ-VCVSPTVNQRLKD 365
Query: 87 TQVWDLNKFPRDFM--NPSSNVELGRQNFELIPFGARRRIC 125
+ V L+ P ++ NP+S + F +PFGA R C
Sbjct: 366 SWVERLDFNPDRYLQDNPASG-----EKFAYVPFGAGRHRC 401
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 33.9 bits (76), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
Query: 27 EYLPRLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFVNMYVENKKGH 86
E L + +LKA +KE+MR P +R + ++ Y +P + + + +
Sbjct: 337 EDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDN 396
Query: 87 TQVWDLNKF-PRDFMNPSSNVELGRQNFELIPFGARRRIC 125
+ D +KF P ++ + F +PFG +R+C
Sbjct: 397 FE--DSHKFRPERWLQKEKKI----NPFAHLPFGIGKRMC 430
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 35 LKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFVNMYVENKKGHTQVWDLNK 94
LKA +KET+R P++ + R ++ Y IP A+T V V +Y ++ T +D
Sbjct: 334 LKASIKETLRLHPISVTLQRYLVNDLVLRDYMIP-AKTLVQVAIYALGREP-TFFFDPEN 391
Query: 95 F-PRDFMNPSSNVELGRQNFELIPFGARRRIC 125
F P +++ N+ R + FG R C
Sbjct: 392 FDPTRWLSKDKNITYFRN----LGFGWGVRQC 419
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 35 LKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFVNMYVENKKGHTQVWDLNK 94
LKA +KET+R P++ + R ++ Y IP A+T V V +Y ++ T +D
Sbjct: 337 LKASIKETLRLHPISVTLQRYLVNDLVLRDYMIP-AKTLVQVAIYALGREP-TFFFDPEN 394
Query: 95 F-PRDFMNPSSNVELGRQNFELIPFGARRRIC 125
F P +++ N+ R + FG R C
Sbjct: 395 FDPTRWLSKDKNITYFRN----LGFGWGVRQC 422
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 33.1 bits (74), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 23/104 (22%)
Query: 29 LPRLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFVNMYVENKKGHTQ 88
+ +L+ ++ + E+MR+QP+ +++ R+ E +I+GY + KKG
Sbjct: 350 IQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPV---------------KKGTNI 394
Query: 89 VWDLNKFPRDFMNPSSNVELGRQNFE-------LIPFGARRRIC 125
+ ++ + R P N E +NF PFG R C
Sbjct: 395 ILNIGRMHRLEFFPKPN-EFTLENFAKNVPYRYFQPFGFGPRGC 437
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 32.7 bits (73), Expect = 0.056, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 37 AVVKETMRFQPMAEIISRETTEKCIINGYEIPAAET 72
AV++ETMR+ P +++SR + I + +P +T
Sbjct: 291 AVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDT 326
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 35 LKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFVNMYV 80
LKA +KET+R P++ + R ++ Y IP A+T V V +Y
Sbjct: 338 LKASIKETLRLHPISVTLQRYPESDLVLQDYLIP-AKTLVQVAIYA 382
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 32.3 bits (72), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 31 RLQHLKAVVKETMRFQPMAEI-ISRETTEKCIINGYEIPAAETPVFVNMYVENKKGHTQV 89
++ + +AV+ E +RF + + I T+E ++ GY IP T V N+Y + +
Sbjct: 331 KMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTT-VITNLY--SVHFDEKY 387
Query: 90 W-DLNKF-PRDFMNPSSNVELGRQNFELIPFGARRRIC 125
W D F P F++ S + L+PF RR C
Sbjct: 388 WRDPEVFHPERFLDSSGYFA---KKEALVPFSLGRRHC 422
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 32.3 bits (72), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 31 RLQHLKAVVKETMRFQPMAEI-ISRETTEKCIINGYEIPAAETPVFVNMYVENKKGHTQV 89
++ + +AV+ E +RF + + I T+E ++ GY IP T V N+Y + +
Sbjct: 331 KMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTT-VITNLY--SVHFDEKY 387
Query: 90 W-DLNKF-PRDFMNPSSNVELGRQNFELIPFGARRRIC 125
W D F P F++ S + L+PF RR C
Sbjct: 388 WRDPEVFHPERFLDSSGYFA---KKEALVPFSLGRRHC 422
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 31.6 bits (70), Expect = 0.12, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 23 FVDEEYLPRLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFVNMYVEN 82
D +PR + ET+R++P ++I R+ ++ ++ G EI +T VF + N
Sbjct: 296 LADRSLVPR------AIAETLRYKPPVQLIPRQLSQDTVVGGMEI-KKDTIVFCMIGAAN 348
Query: 83 K 83
+
Sbjct: 349 R 349
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 31.2 bits (69), Expect = 0.18, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 29/110 (26%)
Query: 29 LPRLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIP----AAETPVFVNMYVENKK 84
L ++ L+ V+KET+R P I+ R + + G+ I A +P
Sbjct: 301 LRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAIS-------- 352
Query: 85 GHTQVWDLNKFPRDFMNPSSNV----ELGRQN-----FELIPFGARRRIC 125
N+ P DF +P V E RQ + IPFGA R C
Sbjct: 353 --------NRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRC 394
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 31.2 bits (69), Expect = 0.18, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 29/110 (26%)
Query: 29 LPRLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIP----AAETPVFVNMYVENKK 84
L ++ L+ V+KET+R P I+ R + + G+ I A +P
Sbjct: 301 LRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAIS-------- 352
Query: 85 GHTQVWDLNKFPRDFMNPSSNV----ELGRQN-----FELIPFGARRRIC 125
N+ P DF +P V E RQ + IPFGA R C
Sbjct: 353 --------NRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRC 394
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 31.2 bits (69), Expect = 0.18, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 29/110 (26%)
Query: 29 LPRLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIP----AAETPVFVNMYVENKK 84
L ++ L+ V+KET+R P I+ R + + G+ I A +P
Sbjct: 301 LRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAIS-------- 352
Query: 85 GHTQVWDLNKFPRDFMNPSSNV----ELGRQN-----FELIPFGARRRIC 125
N+ P DF +P V E RQ + IPFGA R C
Sbjct: 353 --------NRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRC 394
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 31.2 bits (69), Expect = 0.19, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 29/110 (26%)
Query: 29 LPRLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIP----AAETPVFVNMYVENKK 84
L ++ L+ V+KET+R P I+ R + + G+ I A +P
Sbjct: 301 LRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAIS-------- 352
Query: 85 GHTQVWDLNKFPRDFMNPSSNV----ELGRQN-----FELIPFGARRRIC 125
N+ P DF +P V E RQ + IPFGA R C
Sbjct: 353 --------NRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRC 394
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 30.0 bits (66), Expect = 0.36, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 35 LKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFVNMYV 80
+ A+V+E +R++P + R TT+ + G IPA V VN +V
Sbjct: 294 IPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPA---DVMVNTWV 336
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 30.0 bits (66), Expect = 0.36, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 35 LKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFVNMYV 80
+ A+V+E +R++P + R TT+ + G IPA V VN +V
Sbjct: 274 IPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPA---DVMVNTWV 316
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 30.0 bits (66), Expect = 0.40, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 13/85 (15%)
Query: 35 LKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFVNMYVENKKGHTQVWDLNK 94
+ VV+E +R+ A + R TT ING ++P+ TPV + N+
Sbjct: 287 VDTVVEEVLRWTSPAMHVLRVTTADVTINGRDLPSG-TPVVAWLPAANRD---------- 335
Query: 95 FPRDFMNPSSNVELGRQNFELIPFG 119
P +F +P + + GR+ I FG
Sbjct: 336 -PAEFDDPDTFLP-GRKPNRHITFG 358
>pdb|1TQD|A Chain A, Crystal Structure Of Iigp1: A Paradigm For Interferon
Inducible P47 Resistance Gtpases
pdb|1TQD|B Chain B, Crystal Structure Of Iigp1: A Paradigm For Interferon
Inducible P47 Resistance Gtpases
Length = 413
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 13/58 (22%)
Query: 24 VDEEYLPRL--------QHLKAVVKETMRFQP-----MAEIISRETTEKCIINGYEIP 68
VDE L RL ++A++K F+P + E +SR E C+ NGY +P
Sbjct: 322 VDETSLQRLARDWEIEVDQVEAMIKSPAVFKPTDEETIQERLSRYIQEFCLANGYLLP 379
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 31 RLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAA 70
++++L VV ET+R P+A + R + ING IP
Sbjct: 330 QMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKG 369
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 31 RLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAA 70
++++L VV ET+R P+A + R + ING IP
Sbjct: 331 QMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKG 370
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 31 RLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAA 70
++++L VV ET+R P+A + R + ING IP
Sbjct: 332 QMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKG 371
>pdb|1TQ6|A Chain A, Crystal Structure Of Iigp1: A Paradigm For Interferon
Inducible P47 Resistance Gtpases
Length = 413
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 13/58 (22%)
Query: 24 VDEEYLPRL--------QHLKAVVKETMRFQP-----MAEIISRETTEKCIINGYEIP 68
VDE L RL ++A++K F+P + E +SR E C+ NGY +P
Sbjct: 322 VDETSLQRLARDWEIEVDQVEAMIKSPAVFKPTDEETIQERLSRYIQEFCLANGYLLP 379
>pdb|1TQ4|A Chain A, Crystal Structure Of Iigp1: A Paradigm For Interferon
Inducible P47 Resistance Gtpases
Length = 413
Score = 27.7 bits (60), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 13/58 (22%)
Query: 24 VDEEYLPRL--------QHLKAVVKETMRFQP-----MAEIISRETTEKCIINGYEIP 68
VDE L RL ++A++K F+P + E +SR E C+ NGY +P
Sbjct: 322 VDETSLQRLARDWEIEVDQVEAMIKSPAVFKPTDEETIQERLSRYIQEFCLANGYLLP 379
>pdb|1TPZ|A Chain A, Crystal Structure Of Iigp1: A Paradigm For Interferon
Inducible P47 Resistance Gtpases
pdb|1TPZ|B Chain B, Crystal Structure Of Iigp1: A Paradigm For Interferon
Inducible P47 Resistance Gtpases
pdb|1TQ2|A Chain A, Crystal Structure Of Iigp1: A Paradigm For Interferon
Inducible P47 Resistance Gtpases
pdb|1TQ2|B Chain B, Crystal Structure Of Iigp1: A Paradigm For Interferon
Inducible P47 Resistance Gtpases
Length = 422
Score = 27.7 bits (60), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 13/58 (22%)
Query: 24 VDEEYLPRL--------QHLKAVVKETMRFQP-----MAEIISRETTEKCIINGYEIP 68
VDE L RL ++A++K F+P + E +SR E C+ NGY +P
Sbjct: 322 VDETSLQRLARDWEIEVDQVEAMIKSPAVFKPTDEETIQERLSRYIQEFCLANGYLLP 379
>pdb|2WOI|A Chain A, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|B Chain B, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|C Chain C, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|D Chain D, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOV|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOW|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WP5|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP6|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WPC|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPE|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPF|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
Length = 495
Score = 26.6 bits (57), Expect = 4.6, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 16/82 (19%)
Query: 50 EIISRETTEKCIINGYEIPAAETPVFVNMYVENKK------GHTQVWD-----LNKFPRD 98
E I E T++ NG EI E P V++ + K G T D + + PR
Sbjct: 235 ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPR- 293
Query: 99 FMNPSSNVELGRQNFELIPFGA 120
+++++LG +L P G
Sbjct: 294 ----TNDLQLGNVGVKLTPKGG 311
>pdb|2WBA|A Chain A, Properties Of Trypanothione Reductase From T. Brucei
pdb|2WBA|B Chain B, Properties Of Trypanothione Reductase From T. Brucei
Length = 492
Score = 26.6 bits (57), Expect = 4.6, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 16/82 (19%)
Query: 50 EIISRETTEKCIINGYEIPAAETPVFVNMYVENKK------GHTQVWD-----LNKFPRD 98
E I E T++ NG EI E P V++ + K G T D + + PR
Sbjct: 232 ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPR- 290
Query: 99 FMNPSSNVELGRQNFELIPFGA 120
+++++LG +L P G
Sbjct: 291 ----TNDLQLGNVGVKLTPKGG 308
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,440,742
Number of Sequences: 62578
Number of extensions: 126019
Number of successful extensions: 303
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 286
Number of HSP's gapped (non-prelim): 30
length of query: 132
length of database: 14,973,337
effective HSP length: 88
effective length of query: 44
effective length of database: 9,466,473
effective search space: 416524812
effective search space used: 416524812
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 46 (22.3 bits)