Query 043044
Match_columns 132
No_of_seqs 106 out of 1650
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 12:15:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043044.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043044hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 100.0 9.6E-41 2.1E-45 248.8 9.5 126 1-132 314-442 (489)
2 KOG0158 Cytochrome P450 CYP3/C 100.0 4.5E-40 9.7E-45 244.0 7.9 126 1-132 322-450 (499)
3 PLN02971 tryptophan N-hydroxyl 100.0 3.8E-38 8.3E-43 238.7 9.4 129 1-132 355-486 (543)
4 PLN02394 trans-cinnamate 4-mon 100.0 1.7E-37 3.7E-42 233.2 9.0 129 1-132 321-452 (503)
5 PLN02183 ferulate 5-hydroxylas 100.0 3.3E-37 7.2E-42 232.4 9.7 128 1-132 332-461 (516)
6 PLN02500 cytochrome P450 90B1 100.0 3.4E-37 7.4E-42 231.0 9.3 129 1-132 307-446 (490)
7 PLN03234 cytochrome P450 83B1; 100.0 7.6E-37 1.7E-41 229.5 9.8 128 1-131 316-447 (499)
8 PTZ00404 cytochrome P450; Prov 100.0 1.3E-36 2.8E-41 227.4 8.9 122 1-132 311-436 (482)
9 KOG0159 Cytochrome P450 CYP11/ 100.0 1.5E-36 3.3E-41 222.9 6.8 125 1-131 344-471 (519)
10 PLN02290 cytokinin trans-hydro 100.0 3E-36 6.5E-41 227.1 8.4 123 1-132 344-469 (516)
11 PLN02966 cytochrome P450 83A1 100.0 1E-35 2.2E-40 223.7 9.6 127 1-132 317-449 (502)
12 PF00067 p450: Cytochrome P450 100.0 1.8E-36 3.8E-41 222.3 4.7 126 1-131 290-418 (463)
13 PLN02738 carotene beta-ring hy 100.0 1E-35 2.2E-40 228.3 8.9 128 1-132 419-548 (633)
14 PLN00168 Cytochrome P450; Prov 100.0 1.4E-35 3E-40 223.7 9.2 129 1-132 334-469 (519)
15 PLN02774 brassinosteroid-6-oxi 100.0 1.7E-35 3.6E-40 220.6 8.8 124 1-132 292-420 (463)
16 PLN00110 flavonoid 3',5'-hydro 100.0 2.9E-35 6.2E-40 221.4 9.5 129 1-132 317-449 (504)
17 PLN03112 cytochrome P450 famil 100.0 3.7E-35 7.9E-40 221.1 9.3 129 1-132 324-457 (514)
18 PLN03018 homomethionine N-hydr 100.0 4.7E-35 1E-39 221.5 9.8 129 1-132 342-476 (534)
19 PLN02687 flavonoid 3'-monooxyg 100.0 4.7E-35 1E-39 220.8 9.8 129 1-132 325-458 (517)
20 PLN03195 fatty acid omega-hydr 100.0 2.6E-35 5.7E-40 222.0 8.0 127 1-132 320-470 (516)
21 KOG0157 Cytochrome P450 CYP4/C 100.0 3.5E-35 7.7E-40 220.5 8.2 127 1-132 319-450 (497)
22 PLN02169 fatty acid (omega-1)- 100.0 3.2E-35 6.8E-40 221.0 7.9 122 1-132 329-454 (500)
23 PLN03141 3-epi-6-deoxocathaste 100.0 6.3E-35 1.4E-39 217.0 8.1 123 1-132 279-407 (452)
24 PLN02655 ent-kaurene oxidase 100.0 1E-34 2.3E-39 216.5 8.4 125 1-132 290-417 (466)
25 PLN02426 cytochrome P450, fami 100.0 9.8E-35 2.1E-39 218.4 8.0 126 1-131 321-451 (502)
26 PLN02936 epsilon-ring hydroxyl 100.0 8.1E-34 1.8E-38 212.9 8.6 128 1-132 306-436 (489)
27 PLN02196 abscisic acid 8'-hydr 100.0 6.5E-34 1.4E-38 212.2 6.5 122 1-132 292-418 (463)
28 PLN02302 ent-kaurenoic acid ox 100.0 1.6E-33 3.4E-38 210.9 8.1 123 1-132 315-443 (490)
29 PLN02987 Cytochrome P450, fami 100.0 1.8E-32 3.9E-37 204.9 9.2 126 1-132 295-425 (472)
30 KOG0684 Cytochrome P450 [Secon 100.0 2.2E-31 4.9E-36 192.5 8.1 128 1-131 301-437 (486)
31 PLN02648 allene oxide synthase 100.0 4.1E-29 8.9E-34 186.9 7.6 124 1-132 300-440 (480)
32 COG2124 CypX Cytochrome P450 [ 99.9 1.6E-26 3.5E-31 170.3 4.9 101 1-132 264-366 (411)
33 COG2101 SPT15 TATA-box binding 77.3 0.89 1.9E-05 30.1 0.3 35 93-129 36-70 (185)
34 PF14459 Prok-E2_C: Prokaryoti 71.7 1.4 2.9E-05 26.9 0.1 19 110-128 102-120 (131)
35 PF11138 DUF2911: Protein of u 68.4 10 0.00022 24.4 3.6 42 55-97 51-98 (145)
36 PF08492 SRP72: SRP72 RNA-bind 64.4 2.9 6.2E-05 22.6 0.5 10 93-102 42-51 (59)
37 cd04518 TBP_archaea archaeal T 64.1 1.9 4.2E-05 28.6 -0.3 34 93-128 30-63 (174)
38 PRK00394 transcription factor; 55.0 4.1 8.8E-05 27.2 0.0 34 93-128 29-62 (179)
39 PRK06789 flagellar motor switc 53.1 24 0.00053 20.0 3.0 40 37-77 20-62 (74)
40 cd00652 TBP_TLF TATA box bindi 49.2 5 0.00011 26.6 -0.3 34 93-128 30-63 (174)
41 PLN00062 TATA-box-binding prot 48.5 4.7 0.0001 26.9 -0.5 34 93-128 30-63 (179)
42 TIGR03779 Bac_Flav_CT_M Bacter 47.6 4.2 9.1E-05 30.8 -0.9 40 34-75 257-296 (410)
43 PRK13989 cell division topolog 45.3 22 0.00048 20.6 2.1 19 3-21 36-54 (84)
44 COG0851 MinE Septum formation 45.1 17 0.00036 21.3 1.5 19 3-21 35-53 (88)
45 PF12508 DUF3714: Protein of u 44.3 23 0.00051 24.1 2.4 43 32-76 52-94 (200)
46 PRK13990 cell division topolog 44.0 28 0.0006 20.5 2.4 20 3-22 41-60 (90)
47 PF15300 INT_SG_DDX_CT_C: INTS 43.6 11 0.00025 20.7 0.7 16 31-46 39-54 (65)
48 cd04516 TBP_eukaryotes eukaryo 42.8 6.6 0.00014 26.1 -0.4 34 93-128 30-63 (174)
49 PF07886 BA14K: BA14K-like pro 41.5 27 0.00059 16.2 1.7 16 111-126 16-31 (31)
50 PF15054 DUF4535: Domain of un 40.8 7.7 0.00017 19.8 -0.3 16 115-132 3-18 (46)
51 PRK13987 cell division topolog 38.9 34 0.00074 20.2 2.2 18 3-20 33-50 (91)
52 KOG3302 TATA-box binding prote 38.3 11 0.00024 25.5 0.1 34 93-128 51-84 (200)
53 PRK13991 cell division topolog 38.0 40 0.00087 19.7 2.4 18 3-20 35-52 (87)
54 PHA01346 hypothetical protein 36.6 36 0.00079 17.0 1.8 15 6-20 33-47 (53)
55 PRK13988 cell division topolog 35.1 40 0.00087 20.2 2.1 19 3-21 37-55 (97)
56 KOG3506 40S ribosomal protein 35.0 18 0.00038 19.2 0.5 11 116-126 12-22 (56)
57 PRK14759 potassium-transportin 33.9 18 0.00039 16.5 0.4 6 94-99 24-29 (29)
58 PF00352 TBP: Transcription fa 33.8 4.4 9.5E-05 23.4 -2.1 36 91-128 29-65 (86)
59 PRK05933 type III secretion sy 31.4 68 0.0015 23.8 3.1 43 34-77 316-362 (372)
60 PF10965 DUF2767: Protein of u 29.4 77 0.0017 17.7 2.5 20 1-20 1-20 (69)
61 TIGR01215 minE cell division t 28.9 50 0.0011 19.0 1.8 17 4-20 35-51 (81)
62 PRK00296 minE cell division to 26.9 63 0.0014 18.8 2.0 16 4-19 36-51 (86)
63 PF09388 SpoOE-like: Spo0E lik 26.3 52 0.0011 16.3 1.4 39 7-45 6-44 (45)
64 PLN03044 GTP cyclohydrolase I; 24.7 73 0.0016 21.5 2.2 19 1-19 112-130 (188)
65 PF15442 DUF4629: Domain of un 24.4 24 0.00051 22.9 -0.1 9 122-130 128-136 (150)
66 PRK10292 hypothetical protein; 23.6 1.1E+02 0.0024 16.8 2.4 20 1-20 1-20 (69)
67 PF14824 Sirohm_synth_M: Siroh 23.5 94 0.002 14.3 2.5 15 3-17 15-29 (30)
68 PF07055 Eno-Rase_FAD_bd: Enoy 23.2 39 0.00085 18.6 0.6 39 3-48 16-54 (65)
69 cd00642 GTP_cyclohydro1 GTP cy 23.0 80 0.0017 21.3 2.2 19 1-19 111-129 (185)
70 TIGR02115 potass_kdpF K+-trans 22.6 20 0.00043 15.9 -0.5 7 94-100 19-25 (26)
71 COG1886 FliN Flagellar motor s 22.3 1.2E+02 0.0027 19.1 2.9 42 35-77 82-126 (136)
72 cd04517 TLF TBP-like factors ( 22.2 23 0.0005 23.5 -0.5 33 93-128 31-63 (174)
73 TIGR00063 folE GTP cyclohydrol 21.9 87 0.0019 21.0 2.2 19 1-19 106-124 (180)
74 PF11998 DUF3493: Protein of u 20.6 85 0.0018 17.8 1.6 14 3-16 2-15 (75)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.6e-41 Score=248.85 Aligned_cols=126 Identities=40% Similarity=0.680 Sum_probs=117.5
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCcCccCcChhHHHHHHhhhcCCCCcc-ccccccccceeEcCEeeCCCCCcEEEeee
Q 043044 1 MKNLKAKKKAEEEVKSVVKKKGFVDEEYLPRLQHLKAVVKETMRFQPMAE-IISRETTEKCIINGYEIPAAETPVFVNMY 79 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~-~~~r~~~~~~~i~~~~ip~~g~~v~~~~~ 79 (132)
++||++|+|+++||++++|.+..++.+|+.++||++|+|+|++|++|+.| .++|.+++|+.|+||.||+ ||.|++++|
T Consensus 314 l~~Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPk-gT~v~vn~~ 392 (489)
T KOG0156|consen 314 LNNPEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPK-GTTVLVNLW 392 (489)
T ss_pred HhCHHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCC-CCEEEEeeh
Confidence 47999999999999999999988999999999999999999999999999 8899999999999999999 999999999
Q ss_pred ecccCCCCCCCCC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCcccC
Q 043044 80 VENKKGHTQVWDL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 80 ~~~~~~~~~~~~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
++|+| |++|++ +|+||||++++ +.+.....++|||+|+|+|||+.+|.
T Consensus 393 ai~rD--p~vw~dP~eF~PERFl~~~---d~~~~~~~~iPFG~GRR~CpG~~La~ 442 (489)
T KOG0156|consen 393 AIHRD--PKVWEDPEEFKPERFLDSN---DGKGLDFKLIPFGSGRRICPGEGLAR 442 (489)
T ss_pred hhhcC--CccCCCccccChhhhcCCc---cccCCceEecCCCCCcCCCCcHHHHH
Confidence 99999 999999 99999999873 22335677999999999999999873
No 2
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.5e-40 Score=243.95 Aligned_cols=126 Identities=29% Similarity=0.461 Sum_probs=116.4
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCcCccCcChhHHHHHHhhhcCCCCccccccccccceeEc-CEeeCCCCCcEEEeee
Q 043044 1 MKNLKAKKKAEEEVKSVVKKKGFVDEEYLPRLQHLKAVVKETMRFQPMAEIISRETTEKCIIN-GYEIPAAETPVFVNMY 79 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~~~~r~~~~~~~i~-~~~ip~~g~~v~~~~~ 79 (132)
++||++|+||++||++++.....++++.+.+|+||++||+||||+||+.+.+.|.+.+|+++. ++.|++ |+.|.++.|
T Consensus 322 A~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~k-G~~V~Ip~~ 400 (499)
T KOG0158|consen 322 AKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPK-GTPVMIPTY 400 (499)
T ss_pred hcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCC-CCEEEeecc
Confidence 589999999999999997766559999999999999999999999999998899999999999 999999 999999999
Q ss_pred ecccCCCCCCCCC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCcccC
Q 043044 80 VENKKGHTQVWDL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 80 ~~~~~~~~~~~~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
++||| |++|++ +|+||||+++.. . ...+.+|+|||.|||+|+|++||+
T Consensus 401 alH~D--p~~~p~Pe~F~PERF~~~~~--~-~~~~~~ylPFG~GPR~CIGmRfa~ 450 (499)
T KOG0158|consen 401 ALHHD--PEYWPEPEKFKPERFEEENN--K-SRHPGAYLPFGVGPRNCIGMRFAL 450 (499)
T ss_pred cccCC--cccCCCcccCCCccCCCCcc--c-ccCCccccCCCCCccccHHHHHHH
Confidence 99999 999999 999999997632 1 456788999999999999999984
No 3
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=3.8e-38 Score=238.72 Aligned_cols=129 Identities=27% Similarity=0.495 Sum_probs=115.2
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCcCccCcChhHHHHHHhhhcCCCCcc-ccccccccceeEcCEeeCCCCCcEEEeee
Q 043044 1 MKNLKAKKKAEEEVKSVVKKKGFVDEEYLPRLQHLKAVVKETMRFQPMAE-IISRETTEKCIINGYEIPAAETPVFVNMY 79 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~-~~~r~~~~~~~i~~~~ip~~g~~v~~~~~ 79 (132)
++||++|+|+++||+++++.+..++.+++.++||+++||+|++|++|+++ .++|.+.+|++++|+.||+ |+.|.++.|
T Consensus 355 a~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~Ipk-Gt~v~~~~~ 433 (543)
T PLN02971 355 INKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPK-GSQVLLSRY 433 (543)
T ss_pred HhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECC-CCEEEECcH
Confidence 47999999999999999988777899999999999999999999999999 5889999999999999999 999999999
Q ss_pred ecccCCCCCCCCC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCcccC
Q 043044 80 VENKKGHTQVWDL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 80 ~~~~~~~~~~~~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
++||| +++|++ +|+||||+++.+.......++.|+|||.|+|+|+|++||.
T Consensus 434 ~~~~d--~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~ 486 (543)
T PLN02971 434 GLGRN--PKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGT 486 (543)
T ss_pred HhcCC--hhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHH
Confidence 99999 999999 9999999965321111234567999999999999999883
No 4
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=1.7e-37 Score=233.21 Aligned_cols=129 Identities=29% Similarity=0.527 Sum_probs=114.2
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCcCccCcChhHHHHHHhhhcCCCCcc-ccccccccceeEcCEeeCCCCCcEEEeee
Q 043044 1 MKNLKAKKKAEEEVKSVVKKKGFVDEEYLPRLQHLKAVVKETMRFQPMAE-IISRETTEKCIINGYEIPAAETPVFVNMY 79 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~-~~~r~~~~~~~i~~~~ip~~g~~v~~~~~ 79 (132)
++||++|+||++||+++++.+..++++++.++||++|||+|+||++|+++ .++|.+.+|++++|+.||+ |+.|.++.|
T Consensus 321 ~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~-Gt~V~~~~~ 399 (503)
T PLN02394 321 VNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPA-ESKILVNAW 399 (503)
T ss_pred HcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCC-CCEEEEchH
Confidence 47999999999999999987666788899999999999999999999999 5689889999999999999 999999999
Q ss_pred ecccCCCCCCCCC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCcccC
Q 043044 80 VENKKGHTQVWDL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 80 ~~~~~~~~~~~~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
++|+| +++|++ +|+||||+++++..........|+|||.|+|+|+|++||.
T Consensus 400 ~~~rd--~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~ 452 (503)
T PLN02394 400 WLANN--PELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILAL 452 (503)
T ss_pred HHhCC--cccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHH
Confidence 99999 999999 9999999975322122234567999999999999999983
No 5
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=3.3e-37 Score=232.39 Aligned_cols=128 Identities=31% Similarity=0.549 Sum_probs=114.2
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCcCccCcChhHHHHHHhhhcCCCCccccccccccceeEcCEeeCCCCCcEEEeeee
Q 043044 1 MKNLKAKKKAEEEVKSVVKKKGFVDEEYLPRLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFVNMYV 80 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~~~~r~~~~~~~i~~~~ip~~g~~v~~~~~~ 80 (132)
++||++|+|+++||+++++....++.+++.+++|+++||+|+||++|+++...|.+.+|++++|+.||+ |+.|.++.|+
T Consensus 332 a~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPk-Gt~V~~~~~~ 410 (516)
T PLN02183 332 MKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPK-RSRVMINAWA 410 (516)
T ss_pred HhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECC-CCEEEEehhh
Confidence 479999999999999999866667899999999999999999999999996679999999999999999 9999999999
Q ss_pred cccCCCCCCCCC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCcccC
Q 043044 81 ENKKGHTQVWDL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 81 ~~~~~~~~~~~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
+||| +++|++ +|+|+||+++++ .......+.|+|||.|+|+|+|++||.
T Consensus 411 ~hrd--~~~~~dP~~F~PeRfl~~~~-~~~~~~~~~~lpFG~G~R~CiG~~lA~ 461 (516)
T PLN02183 411 IGRD--KNSWEDPDTFKPSRFLKPGV-PDFKGSHFEFIPFGSGRRSCPGMQLGL 461 (516)
T ss_pred hcCC--ccccCCccccCchhhCCCCC-ccccCCcceecCCCCCCCCCCChHHHH
Confidence 9999 999999 999999996532 112234567999999999999999983
No 6
>PLN02500 cytochrome P450 90B1
Probab=100.00 E-value=3.4e-37 Score=231.05 Aligned_cols=129 Identities=17% Similarity=0.275 Sum_probs=112.1
Q ss_pred CCCHHHHHHHHHHHHHHHhc-----CCCCCcCccCcChhHHHHHHhhhcCCCCccccccccccceeEcCEeeCCCCCcEE
Q 043044 1 MKNLKAKKKAEEEVKSVVKK-----KGFVDEEYLPRLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVF 75 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~-----~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~~~~r~~~~~~~i~~~~ip~~g~~v~ 75 (132)
++||++|+|+++||+++++. +..++.+++.++||+++||+|++|++|+++.++|.+.+|++++|+.||+ |+.|+
T Consensus 307 ~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPk-Gt~V~ 385 (490)
T PLN02500 307 QGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPS-GWKVL 385 (490)
T ss_pred hhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECC-CCEEE
Confidence 47999999999999998742 2347889999999999999999999999997789999999999999999 99999
Q ss_pred EeeeecccCCCCCCCCC--CCCCCCCCCCCCCccc----CCCccceeeccCCCCCCCCCcccC
Q 043044 76 VNMYVENKKGHTQVWDL--NKFPRDFMNPSSNVEL----GRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 76 ~~~~~~~~~~~~~~~~~--~f~p~Rf~~~~~~~~~----~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
++.|++||| +++|++ +|+|+||+++++.... ...+..|+|||.|+|+|+|+++|.
T Consensus 386 ~~~~~~hrd--p~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~ 446 (490)
T PLN02500 386 PVIAAVHLD--SSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAK 446 (490)
T ss_pred echhhcccC--cccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHH
Confidence 999999999 999999 9999999965321110 124567999999999999999984
No 7
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=7.6e-37 Score=229.48 Aligned_cols=128 Identities=41% Similarity=0.747 Sum_probs=114.3
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCcCccCcChhHHHHHHhhhcCCCCcc-ccccccccceeEcCEeeCCCCCcEEEeee
Q 043044 1 MKNLKAKKKAEEEVKSVVKKKGFVDEEYLPRLQHLKAVVKETMRFQPMAE-IISRETTEKCIINGYEIPAAETPVFVNMY 79 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~-~~~r~~~~~~~i~~~~ip~~g~~v~~~~~ 79 (132)
++||++|+|+++||++++++...++.+++.++||+++||+|++|++|+++ .++|.+.+|++++|+.||+ |+.|.++.|
T Consensus 316 ~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~-Gt~v~~~~~ 394 (499)
T PLN03234 316 IKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPA-KTIIQVNAW 394 (499)
T ss_pred HhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECC-CCEEEEehH
Confidence 47999999999999999987666889999999999999999999999999 4689999999999999999 999999999
Q ss_pred ecccCCCCCCC-CC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCccc
Q 043044 80 VENKKGHTQVW-DL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAH 131 (132)
Q Consensus 80 ~~~~~~~~~~~-~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a 131 (132)
++||| +++| ++ +|+|+||+++.+.......+..|+|||.|+|+|+|+++|
T Consensus 395 ~~~rd--~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A 447 (499)
T PLN03234 395 AVSRD--TAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLG 447 (499)
T ss_pred hhhCC--cccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHH
Confidence 99999 9999 57 999999997643222334467799999999999999987
No 8
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=1.3e-36 Score=227.41 Aligned_cols=122 Identities=25% Similarity=0.371 Sum_probs=112.5
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCcCccCcChhHHHHHHhhhcCCCCcc-ccccccccceeE-cCEeeCCCCCcEEEee
Q 043044 1 MKNLKAKKKAEEEVKSVVKKKGFVDEEYLPRLQHLKAVVKETMRFQPMAE-IISRETTEKCII-NGYEIPAAETPVFVNM 78 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~-~~~r~~~~~~~i-~~~~ip~~g~~v~~~~ 78 (132)
++||++|+||++||+++++....++.+++.+|||+++||+|+||++|+++ .++|.+.+|+++ +|+.||+ |+.|.++.
T Consensus 311 ~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~-Gt~V~~~~ 389 (482)
T PTZ00404 311 CNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPK-DAQILINY 389 (482)
T ss_pred HcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECC-CCEEEeeH
Confidence 47999999999999999987666789999999999999999999999999 579999999999 9999999 99999999
Q ss_pred eecccCCCCCCCCC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCcccC
Q 043044 79 YVENKKGHTQVWDL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 79 ~~~~~~~~~~~~~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
+++|+| +++|++ +|+||||++.. .+..|+|||.|+|.|+|++||+
T Consensus 390 ~a~hrd--p~~~~dP~~F~PeRwl~~~-------~~~~~~pFg~G~R~C~G~~~A~ 436 (482)
T PTZ00404 390 YSLGRN--EKYFENPEQFDPSRFLNPD-------SNDAFMPFSIGPRNCVGQQFAQ 436 (482)
T ss_pred HHhhCC--ccccCCccccCccccCCCC-------CCCceeccCCCCCCCccHHHHH
Confidence 999999 999999 99999998641 2457999999999999999984
No 9
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-36 Score=222.87 Aligned_cols=125 Identities=24% Similarity=0.434 Sum_probs=117.2
Q ss_pred CCCHHHHHHHHHHHHHHHhc-CCCCCcCccCcChhHHHHHHhhhcCCCCccccccccccceeEcCEeeCCCCCcEEEeee
Q 043044 1 MKNLKAKKKAEEEVKSVVKK-KGFVDEEYLPRLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFVNMY 79 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~-~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~~~~r~~~~~~~i~~~~ip~~g~~v~~~~~ 79 (132)
++||++|++|++||.+++.. +..++.+.+.++|||+|||||++||||+++.+.|...+|+++.||.||+ ||.|.+..+
T Consensus 344 arnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPa-gT~V~l~~~ 422 (519)
T KOG0159|consen 344 ARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPA-GTLVVLFLY 422 (519)
T ss_pred hcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecC-CCeEEEeeh
Confidence 58999999999999999988 5678899999999999999999999999999999999999999999999 999999999
Q ss_pred ecccCCCCCCCCC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCccc
Q 043044 80 VENKKGHTQVWDL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAH 131 (132)
Q Consensus 80 ~~~~~~~~~~~~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a 131 (132)
.+.+| +.+|++ +|.|+||++++. ....++.++|||.|+|+|+|+++|
T Consensus 423 ~~~r~--~~~F~~p~~F~PeRWL~~~~---~~~~pF~~LPFGfG~R~C~GRRiA 471 (519)
T KOG0159|consen 423 VLGRN--PAYFPDPEEFLPERWLKPST---KTIHPFASLPFGFGPRMCLGRRIA 471 (519)
T ss_pred hhccC--hhhCCCccccChhhhccccc---CCCCCceecCCCCCccccchHHHH
Confidence 99999 999999 999999998742 456789999999999999999987
No 10
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=3e-36 Score=227.09 Aligned_cols=123 Identities=21% Similarity=0.313 Sum_probs=111.4
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCcCccCcChhHHHHHHhhhcCCCCccccccccccceeEcCEeeCCCCCcEEEeeee
Q 043044 1 MKNLKAKKKAEEEVKSVVKKKGFVDEEYLPRLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFVNMYV 80 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~~~~r~~~~~~~i~~~~ip~~g~~v~~~~~~ 80 (132)
++||++|+|+++||+++++.+ .++.+++.++||++|||+|++|++|+.+.++|.+.+|++++|+.||+ |+.|.++.|+
T Consensus 344 ~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~-Gt~V~~~~~~ 421 (516)
T PLN02290 344 ASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPK-GLSIWIPVLA 421 (516)
T ss_pred hcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECC-CCEEEecHHH
Confidence 479999999999999999875 67899999999999999999999999987899999999999999999 9999999999
Q ss_pred cccCCCCCCC-CC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCcccC
Q 043044 81 ENKKGHTQVW-DL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 81 ~~~~~~~~~~-~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
+|+| +++| ++ +|+||||++.. ......|+|||.|+|+|+|+++|.
T Consensus 422 ~~rd--p~~~~~dP~~F~PeRfl~~~-----~~~~~~~~pFG~G~R~C~G~~lA~ 469 (516)
T PLN02290 422 IHHS--EELWGKDANEFNPDRFAGRP-----FAPGRHFIPFAAGPRNCIGQAFAM 469 (516)
T ss_pred hcCC--hhhhCCChhhcCccccCCCC-----CCCCCeEecCCCCCCCCccHHHHH
Confidence 9999 9999 68 99999999541 112346999999999999999883
No 11
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=1e-35 Score=223.72 Aligned_cols=127 Identities=35% Similarity=0.609 Sum_probs=112.4
Q ss_pred CCCHHHHHHHHHHHHHHHhcC--CCCCcCccCcChhHHHHHHhhhcCCCCcc-ccccccccceeEcCEeeCCCCCcEEEe
Q 043044 1 MKNLKAKKKAEEEVKSVVKKK--GFVDEEYLPRLQHLKAVVKETMRFQPMAE-IISRETTEKCIINGYEIPAAETPVFVN 77 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~--~~~~~~~~~~~~~l~~~i~E~lRl~p~~~-~~~r~~~~~~~i~~~~ip~~g~~v~~~ 77 (132)
++||++|+|+++||+++++.. ..++.+++.++||+++||+|++|++|+++ .++|.+.+|++++|+.||+ |+.|.++
T Consensus 317 ~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~-Gt~V~~~ 395 (502)
T PLN02966 317 MKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPA-GTTVNVN 395 (502)
T ss_pred HhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECC-CCEEEEe
Confidence 479999999999999999753 34688999999999999999999999999 5789999999999999999 9999999
Q ss_pred eeecccCCCCCCC-CC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCcccC
Q 043044 78 MYVENKKGHTQVW-DL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 78 ~~~~~~~~~~~~~-~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
.|++||| +++| ++ +|+|+||+++.. ........|+|||.|+|+|+|++||.
T Consensus 396 ~~~~~rd--p~~~g~dP~~F~PeRwl~~~~--~~~~~~~~~~pFg~G~R~C~G~~~A~ 449 (502)
T PLN02966 396 AWAVSRD--EKEWGPNPDEFRPERFLEKEV--DFKGTDYEFIPFGSGRRMCPGMRLGA 449 (502)
T ss_pred cccccCC--cccccCChhhCChhhhcCCCC--CcCCCcCCccCCCCCCCCCCCHHHHH
Confidence 9999999 9999 77 999999996532 12234567999999999999999983
No 12
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00 E-value=1.8e-36 Score=222.25 Aligned_cols=126 Identities=32% Similarity=0.488 Sum_probs=112.5
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCcCccCcChhHHHHHHhhhcCCCCcc-ccccccccceeEcCEeeCCCCCcEEEeee
Q 043044 1 MKNLKAKKKAEEEVKSVVKKKGFVDEEYLPRLQHLKAVVKETMRFQPMAE-IISRETTEKCIINGYEIPAAETPVFVNMY 79 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~-~~~r~~~~~~~i~~~~ip~~g~~v~~~~~ 79 (132)
++||++|+||++||+++++....++.+++.++|||++||+|++|++|+.+ .++|.+.+|++++|+.||+ |+.|.++.+
T Consensus 290 ~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~-gt~v~~~~~ 368 (463)
T PF00067_consen 290 AKNPEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPK-GTIVIVSIY 368 (463)
T ss_dssp HHSHHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEET-TSEEEEEHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccc
Confidence 36899999999999999976667889999999999999999999999999 8999999999999999999 999999999
Q ss_pred ecccCCCCCCCCC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCccc
Q 043044 80 VENKKGHTQVWDL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAH 131 (132)
Q Consensus 80 ~~~~~~~~~~~~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a 131 (132)
++|+| +++|++ +|+|+||++... ........|+|||.|+|.|+|+++|
T Consensus 369 ~~~~d--~~~~~dp~~F~P~R~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A 418 (463)
T PF00067_consen 369 ALHRD--PEYFPDPDEFDPERFLDERG--ISNRPSFAFLPFGAGPRMCPGRNLA 418 (463)
T ss_dssp HHTTS--TTTSSSTTS--TTGGBTTTS--TBCSSSTTSSTTESSTTS-TTHHHH
T ss_pred ccccc--cccccccccccccccccccc--ccccccccccccccccccchHHHHH
Confidence 99999 999988 999999998742 1234577799999999999999987
No 13
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00 E-value=1e-35 Score=228.31 Aligned_cols=128 Identities=25% Similarity=0.417 Sum_probs=112.8
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCcCccCcChhHHHHHHhhhcCCCCccccccccccceeEcCEeeCCCCCcEEEeeee
Q 043044 1 MKNLKAKKKAEEEVKSVVKKKGFVDEEYLPRLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFVNMYV 80 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~~~~r~~~~~~~i~~~~ip~~g~~v~~~~~~ 80 (132)
++||++|+||++||+++++. ..++++++++||||++||+|+||++|+.+.+.|.+.+|++++|+.||+ |+.|.++.|.
T Consensus 419 ~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~R~a~~d~~i~gy~IPk-GT~V~~s~~~ 496 (633)
T PLN02738 419 SKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLENDMLGGYPIKR-GEDIFISVWN 496 (633)
T ss_pred HhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCHHHHHHHHHHHhcCCCccccceeeccCceECCEEECC-CCEEEecHHH
Confidence 47999999999999999984 557899999999999999999999999997778899999999999999 9999999999
Q ss_pred cccCCCCCCCCC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCcccC
Q 043044 81 ENKKGHTQVWDL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 81 ~~~~~~~~~~~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
+||| +++|++ +|+|+||+..+...........|+|||.|+|+|+|++||.
T Consensus 497 ihrd--p~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~ 548 (633)
T PLN02738 497 LHRS--PKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFAS 548 (633)
T ss_pred HhCC--ccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHH
Confidence 9999 999999 9999999854211112234567999999999999999983
No 14
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=1.4e-35 Score=223.74 Aligned_cols=129 Identities=26% Similarity=0.441 Sum_probs=113.0
Q ss_pred CCCHHHHHHHHHHHHHHHhcC-CCCCcCccCcChhHHHHHHhhhcCCCCcc-ccccccccceeEcCEeeCCCCCcEEEee
Q 043044 1 MKNLKAKKKAEEEVKSVVKKK-GFVDEEYLPRLQHLKAVVKETMRFQPMAE-IISRETTEKCIINGYEIPAAETPVFVNM 78 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~-~~~~~~~~~~~~~l~~~i~E~lRl~p~~~-~~~r~~~~~~~i~~~~ip~~g~~v~~~~ 78 (132)
++||++|+|+++||+++++.. ..++.+++.++||+++||+|++|++|+.+ .++|.+.+|++++|+.||+ |+.|.++.
T Consensus 334 ~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ipk-Gt~v~~~~ 412 (519)
T PLN00168 334 VKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPK-GATVNFMV 412 (519)
T ss_pred HhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECC-CCEEEECh
Confidence 479999999999999999764 45788999999999999999999999998 6689999999999999999 99999999
Q ss_pred eecccCCCCCCCCC--CCCCCCCCCCCCCc--c-cCCCccceeeccCCCCCCCCCcccC
Q 043044 79 YVENKKGHTQVWDL--NKFPRDFMNPSSNV--E-LGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 79 ~~~~~~~~~~~~~~--~f~p~Rf~~~~~~~--~-~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
+++|+| +++|++ +|+|+||++..... . ....++.|+|||.|+|+|+|++||.
T Consensus 413 ~~~~~d--~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~ 469 (519)
T PLN00168 413 AEMGRD--EREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAM 469 (519)
T ss_pred HHHhcC--ccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHH
Confidence 999999 999999 99999999742111 0 1123467999999999999999983
No 15
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00 E-value=1.7e-35 Score=220.64 Aligned_cols=124 Identities=21% Similarity=0.281 Sum_probs=110.5
Q ss_pred CCCHHHHHHHHHHHHHHHhc---CCCCCcCccCcChhHHHHHHhhhcCCCCccccccccccceeEcCEeeCCCCCcEEEe
Q 043044 1 MKNLKAKKKAEEEVKSVVKK---KGFVDEEYLPRLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFVN 77 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~---~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~~~~r~~~~~~~i~~~~ip~~g~~v~~~ 77 (132)
++||++|+|+++||+++++. +..++.+++.++||+++||+|+||++|+++.+.|.+.+|++++|+.||+ |+.|+++
T Consensus 292 ~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~Ipk-Gt~v~~~ 370 (463)
T PLN02774 292 HDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPK-GWRIYVY 370 (463)
T ss_pred HcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECC-CCEEEEe
Confidence 47999999999999999864 2457889999999999999999999999887779999999999999999 9999999
Q ss_pred eeecccCCCCCCCCC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCcccC
Q 043044 78 MYVENKKGHTQVWDL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 78 ~~~~~~~~~~~~~~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
.+.+|+| +++|++ +|+|+||++.+ . .. ...|+|||.|+|+|+|+++|.
T Consensus 371 ~~~~~rd--p~~~~dP~~F~PeRfl~~~--~--~~-~~~~lpFG~G~r~C~G~~~A~ 420 (463)
T PLN02774 371 TREINYD--PFLYPDPMTFNPWRWLDKS--L--ES-HNYFFLFGGGTRLCPGKELGI 420 (463)
T ss_pred hHHhcCC--cccCCChhccCchhcCCCC--c--CC-CccccCcCCCCCcCCcHHHHH
Confidence 9999999 999999 99999999652 1 11 235999999999999999983
No 16
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=2.9e-35 Score=221.42 Aligned_cols=129 Identities=34% Similarity=0.580 Sum_probs=113.5
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCcCccCcChhHHHHHHhhhcCCCCcc-ccccccccceeEcCEeeCCCCCcEEEeee
Q 043044 1 MKNLKAKKKAEEEVKSVVKKKGFVDEEYLPRLQHLKAVVKETMRFQPMAE-IISRETTEKCIINGYEIPAAETPVFVNMY 79 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~-~~~r~~~~~~~i~~~~ip~~g~~v~~~~~ 79 (132)
++||++|+|+++|++++++....++.+++.++||+++||+|++|++|+.+ .++|.+.+|++++|+.||+ |+.|.++.+
T Consensus 317 ~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~-Gt~V~~~~~ 395 (504)
T PLN00110 317 LKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPK-NTRLSVNIW 395 (504)
T ss_pred HhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECC-CCEEEEeHH
Confidence 46999999999999999987767889999999999999999999999999 5899999999999999999 999999999
Q ss_pred ecccCCCCCCCCC--CCCCCCCCCCCCCc-ccCCCccceeeccCCCCCCCCCcccC
Q 043044 80 VENKKGHTQVWDL--NKFPRDFMNPSSNV-ELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 80 ~~~~~~~~~~~~~--~f~p~Rf~~~~~~~-~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
++|+| +++|++ +|+|+||++..... ........|+|||.|+|.|+|+++|.
T Consensus 396 ~~h~d--~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~ 449 (504)
T PLN00110 396 AIGRD--PDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGI 449 (504)
T ss_pred HhcCC--hhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHH
Confidence 99999 999999 99999999642111 11112357999999999999999983
No 17
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=3.7e-35 Score=221.13 Aligned_cols=129 Identities=34% Similarity=0.555 Sum_probs=113.8
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCcCccCcChhHHHHHHhhhcCCCCcc-ccccccccceeEcCEeeCCCCCcEEEeee
Q 043044 1 MKNLKAKKKAEEEVKSVVKKKGFVDEEYLPRLQHLKAVVKETMRFQPMAE-IISRETTEKCIINGYEIPAAETPVFVNMY 79 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~-~~~r~~~~~~~i~~~~ip~~g~~v~~~~~ 79 (132)
++||++|+||++||+++++.++.++.+++.+++|++++|+|++|++|+++ .++|.+.+|++++|+.||+ |+.|.++.+
T Consensus 324 ~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPk-Gt~v~~~~~ 402 (514)
T PLN03112 324 IKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPA-KTRVFINTH 402 (514)
T ss_pred HhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCC-CCEEEEehH
Confidence 47999999999999999987767899999999999999999999999999 5789999999999999999 999999999
Q ss_pred ecccCCCCCCCCC--CCCCCCCCCCCCCc-c-cCCCccceeeccCCCCCCCCCcccC
Q 043044 80 VENKKGHTQVWDL--NKFPRDFMNPSSNV-E-LGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 80 ~~~~~~~~~~~~~--~f~p~Rf~~~~~~~-~-~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
++|+| +++|++ +|+|+||+...+.. . .......|+|||.|+|+|+|++||+
T Consensus 403 ~~h~d--~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~ 457 (514)
T PLN03112 403 GLGRN--TKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGV 457 (514)
T ss_pred HhhCC--cccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHH
Confidence 99999 999999 99999987642111 1 1123467999999999999999984
No 18
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=4.7e-35 Score=221.47 Aligned_cols=129 Identities=25% Similarity=0.376 Sum_probs=113.9
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCcCccCcChhHHHHHHhhhcCCCCcc-ccccccccceeEcCEeeCCCCCcEEEeee
Q 043044 1 MKNLKAKKKAEEEVKSVVKKKGFVDEEYLPRLQHLKAVVKETMRFQPMAE-IISRETTEKCIINGYEIPAAETPVFVNMY 79 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~-~~~r~~~~~~~i~~~~ip~~g~~v~~~~~ 79 (132)
++||++|+|+++||+++++.+..++.+++.++||+++||+|++|++|+.+ ..+|.+.+|++++|+.||+ |+.|.++.|
T Consensus 342 ~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~Ipk-Gt~V~~~~~ 420 (534)
T PLN03018 342 LKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPK-GSHIHVCRP 420 (534)
T ss_pred HcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECC-CCEEEEChH
Confidence 47999999999999999987777888999999999999999999999999 5579999999999999999 999999999
Q ss_pred ecccCCCCCCCCC--CCCCCCCCCCCCCc---ccCCCccceeeccCCCCCCCCCcccC
Q 043044 80 VENKKGHTQVWDL--NKFPRDFMNPSSNV---ELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 80 ~~~~~~~~~~~~~--~f~p~Rf~~~~~~~---~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
++|+| +.+|++ +|+|+||++.++.. .....+..|+|||.|+|.|+|+++|.
T Consensus 421 ~~~~d--p~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~ 476 (534)
T PLN03018 421 GLGRN--PKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGT 476 (534)
T ss_pred HhcCC--cccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHH
Confidence 99999 999999 99999999653211 01134567999999999999999883
No 19
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=4.7e-35 Score=220.80 Aligned_cols=129 Identities=36% Similarity=0.621 Sum_probs=114.5
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCcCccCcChhHHHHHHhhhcCCCCcc-ccccccccceeEcCEeeCCCCCcEEEeee
Q 043044 1 MKNLKAKKKAEEEVKSVVKKKGFVDEEYLPRLQHLKAVVKETMRFQPMAE-IISRETTEKCIINGYEIPAAETPVFVNMY 79 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~-~~~r~~~~~~~i~~~~ip~~g~~v~~~~~ 79 (132)
++||++|+|+++||+++++....++.+++.++||+++||+|++|++|+++ .++|.+.+|++++|+.||+ |+.|.++.|
T Consensus 325 ~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~-Gt~v~~~~~ 403 (517)
T PLN02687 325 IRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPK-GATLLVNVW 403 (517)
T ss_pred HhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECC-CCEEEEecH
Confidence 47999999999999999987777889999999999999999999999999 5899999999999999999 999999999
Q ss_pred ecccCCCCCCCCC--CCCCCCCCCCCCCc--ccCCCccceeeccCCCCCCCCCcccC
Q 043044 80 VENKKGHTQVWDL--NKFPRDFMNPSSNV--ELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 80 ~~~~~~~~~~~~~--~f~p~Rf~~~~~~~--~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
++|+| +++|++ +|+|+||++..... .....+..|+|||.|+|+|+|++||.
T Consensus 404 ~~h~d--~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~ 458 (517)
T PLN02687 404 AIARD--PEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGL 458 (517)
T ss_pred HhcCC--cccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHH
Confidence 99999 999999 99999999653211 11234567999999999999999983
No 20
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00 E-value=2.6e-35 Score=222.04 Aligned_cols=127 Identities=24% Similarity=0.302 Sum_probs=107.7
Q ss_pred CCCHHHHHHHHHHHHHHHhc--------------------CCCCCcCccCcChhHHHHHHhhhcCCCCccccccccccce
Q 043044 1 MKNLKAKKKAEEEVKSVVKK--------------------KGFVDEEYLPRLQHLKAVVKETMRFQPMAEIISRETTEKC 60 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~--------------------~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~~~~r~~~~~~ 60 (132)
++||++|+||++||+++++. +..++++++.++||++|||+|+||++|+++...|.+.+|.
T Consensus 320 ~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~ 399 (516)
T PLN03195 320 MMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDD 399 (516)
T ss_pred hcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCc
Confidence 47999999999999998753 2347888999999999999999999999996667676766
Q ss_pred eE-cCEeeCCCCCcEEEeeeecccCCCCCCC-CC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCcccC
Q 043044 61 II-NGYEIPAAETPVFVNMYVENKKGHTQVW-DL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 61 ~i-~~~~ip~~g~~v~~~~~~~~~~~~~~~~-~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
++ +|+.||+ |+.|.++.|++||| +++| ++ +|+||||++... .....+..|+|||.|+|+|+|++||.
T Consensus 400 ~~~~G~~Ipk-Gt~V~~~~~~~h~d--p~~~g~dP~~F~PeRwl~~~~--~~~~~~~~~~pFG~G~R~CiG~~lA~ 470 (516)
T PLN03195 400 VLPDGTKVKA-GGMVTYVPYSMGRM--EYNWGPDAASFKPERWIKDGV--FQNASPFKFTAFQAGPRICLGKDSAY 470 (516)
T ss_pred CcCCCcEECC-CCEEEEehHhhccC--hhhhccChhhcCCcccCCCCC--cCCCCCceEeccCCCCCcCcCHHHHH
Confidence 65 8999999 99999999999999 9999 77 999999996421 11223567999999999999999983
No 21
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00 E-value=3.5e-35 Score=220.50 Aligned_cols=127 Identities=27% Similarity=0.484 Sum_probs=109.4
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCC-CcCccCcChhHHHHHHhhhcCCCCccccccccccceeEc-CEeeCCCCCcEEEee
Q 043044 1 MKNLKAKKKAEEEVKSVVKKKGFV-DEEYLPRLQHLKAVVKETMRFQPMAEIISRETTEKCIIN-GYEIPAAETPVFVNM 78 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~~~~-~~~~~~~~~~l~~~i~E~lRl~p~~~~~~r~~~~~~~i~-~~~ip~~g~~v~~~~ 78 (132)
+.||++|+|+++|++++++.+... ......+|+|+++||+|+|||+|++|.+.|.+.+|+.++ |+.||+ |+.|.++.
T Consensus 319 a~hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPk-G~~V~i~~ 397 (497)
T KOG0157|consen 319 AKHPEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPK-GTNVLISI 397 (497)
T ss_pred hcCHHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCC-CCEEEEeh
Confidence 479999999999999999855432 222233699999999999999999999999999999995 899999 99999999
Q ss_pred eecccCCCCCCCC-C--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCcccC
Q 043044 79 YVENKKGHTQVWD-L--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 79 ~~~~~~~~~~~~~-~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
+++||+ +.+|+ + +|+|+||+++... ....+++|+|||+|+|.|+|+.||.
T Consensus 398 ~~~~r~--~~~~~~dp~~F~PeRf~~~~~~--~~~~~~~fipFsaGpR~CiG~~fA~ 450 (497)
T KOG0157|consen 398 YALHRD--PRVWGEDPEEFDPERFLDGEEK--AKRHPFAFIPFSAGPRNCIGQKFAM 450 (497)
T ss_pred HHhccC--ccccCCChhhcCccccCCCCCc--CCCCCccccCCCCCcccchhHHHHH
Confidence 999999 99999 4 8999999965322 2445789999999999999999983
No 22
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00 E-value=3.2e-35 Score=221.01 Aligned_cols=122 Identities=19% Similarity=0.344 Sum_probs=104.3
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCcCccCcChhHHHHHHhhhcCCCCcccccccccccee-EcCEeeCCCCCcEEEeee
Q 043044 1 MKNLKAKKKAEEEVKSVVKKKGFVDEEYLPRLQHLKAVVKETMRFQPMAEIISRETTEKCI-INGYEIPAAETPVFVNMY 79 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~~~~r~~~~~~~-i~~~~ip~~g~~v~~~~~ 79 (132)
++||++|+|+++||++++ +.+++.++||+++||+|+||++|++|.+.|.+.+|.+ ++|+.||+ |+.|.++.|
T Consensus 329 a~~Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~Ipk-Gt~v~i~~~ 401 (500)
T PLN02169 329 SKHPQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDA-ESKIVICIY 401 (500)
T ss_pred HCCHHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECC-CCEEEEcHH
Confidence 479999999999999874 5678999999999999999999999976676666655 48999999 999999999
Q ss_pred ecccCCCCCCC-CC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCcccC
Q 043044 80 VENKKGHTQVW-DL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 80 ~~~~~~~~~~~-~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
++||| +++| ++ +|+|+||+++.+.. ....++.|+|||+|+|+|+|++||.
T Consensus 402 ~ihrd--~~~w~~dP~~F~PeRfl~~~~~~-~~~~~~~~lPFG~GpR~CiG~~~A~ 454 (500)
T PLN02169 402 ALGRM--RSVWGEDALDFKPERWISDNGGL-RHEPSYKFMAFNSGPRTCLGKHLAL 454 (500)
T ss_pred HhhCC--ccccCCChhhcCccccCCCCCCc-cCCCCccccCCCCCCCCCcCHHHHH
Confidence 99999 9999 57 99999999653211 1123678999999999999999983
No 23
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00 E-value=6.3e-35 Score=216.97 Aligned_cols=123 Identities=20% Similarity=0.215 Sum_probs=109.7
Q ss_pred CCCHHHHHHHHHHHHHHHhc----CCCCCcCccCcChhHHHHHHhhhcCCCCccccccccccceeEcCEeeCCCCCcEEE
Q 043044 1 MKNLKAKKKAEEEVKSVVKK----KGFVDEEYLPRLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFV 76 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~----~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~~~~r~~~~~~~i~~~~ip~~g~~v~~ 76 (132)
++||++|+++++||+++.+. +..++.+++.++||++|||+|++|++|+.+.++|.+.+|++++|+.||+ |+.|.+
T Consensus 279 ~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPk-G~~V~~ 357 (452)
T PLN03141 279 SDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPK-GWCVLA 357 (452)
T ss_pred HhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECC-CCEEEE
Confidence 46999999999999988642 2346788899999999999999999999887789999999999999999 999999
Q ss_pred eeeecccCCCCCCCCC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCcccC
Q 043044 77 NMYVENKKGHTQVWDL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 77 ~~~~~~~~~~~~~~~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
+.+++|+| +++|++ .|+||||++.+ ..+..|+|||.|+|+|+|++||.
T Consensus 358 ~~~~~~~d--~~~~~dP~~F~PeRfl~~~------~~~~~~~pFG~G~R~C~G~~lA~ 407 (452)
T PLN03141 358 YFRSVHLD--EENYDNPYQFNPWRWQEKD------MNNSSFTPFGGGQRLCPGLDLAR 407 (452)
T ss_pred ehHhccCC--chhcCCccccCcccccCCC------CCCCCCCCCCCCCCCCChHHHHH
Confidence 99999999 999999 99999999652 12567999999999999999983
No 24
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=1e-34 Score=216.53 Aligned_cols=125 Identities=28% Similarity=0.466 Sum_probs=111.9
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCcCccCcChhHHHHHHhhhcCCCCcc-ccccccccceeEcCEeeCCCCCcEEEeee
Q 043044 1 MKNLKAKKKAEEEVKSVVKKKGFVDEEYLPRLQHLKAVVKETMRFQPMAE-IISRETTEKCIINGYEIPAAETPVFVNMY 79 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~-~~~r~~~~~~~i~~~~ip~~g~~v~~~~~ 79 (132)
++||++|+|+++||+++++.+. ++.+++.++||+++||+|+||++|+.+ .++|.+.+|++++|+.||+ |+.|+++.+
T Consensus 290 ~~~p~~~~~l~~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~-gt~v~~~~~ 367 (466)
T PLN02655 290 AKNPDKQERLYREIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPA-GTQIAINIY 367 (466)
T ss_pred HcCHHHHHHHHHHHHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECC-CCEEEecHH
Confidence 4799999999999999998755 889999999999999999999999998 5679999999999999999 999999999
Q ss_pred ecccCCCCCCCCC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCcccC
Q 043044 80 VENKKGHTQVWDL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 80 ~~~~~~~~~~~~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
++||| +++|++ +|+|+||++..+. ......++|||.|+|+|+|++||.
T Consensus 368 ~~~~d--~~~~~~p~~F~PeR~~~~~~~---~~~~~~~~~Fg~G~r~C~G~~~A~ 417 (466)
T PLN02655 368 GCNMD--KKRWENPEEWDPERFLGEKYE---SADMYKTMAFGAGKRVCAGSLQAM 417 (466)
T ss_pred HhcCC--cccCCChhccCccccCCCCcc---cCCcccccCCCCCCCCCCcHHHHH
Confidence 99999 999998 9999999965211 122467999999999999999883
No 25
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00 E-value=9.8e-35 Score=218.43 Aligned_cols=126 Identities=19% Similarity=0.242 Sum_probs=110.3
Q ss_pred CCCHHHHHHHHHHHHHHHhcCC-CCCcCccCcChhHHHHHHhhhcCCCCccccccccccceeE-cCEeeCCCCCcEEEee
Q 043044 1 MKNLKAKKKAEEEVKSVVKKKG-FVDEEYLPRLQHLKAVVKETMRFQPMAEIISRETTEKCII-NGYEIPAAETPVFVNM 78 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~~-~~~~~~~~~~~~l~~~i~E~lRl~p~~~~~~r~~~~~~~i-~~~~ip~~g~~v~~~~ 78 (132)
++||++|+||++||+++++.+. .++.+++.++||+++||+|+||++|+.+...|.+.+|.++ +|+.||+ |+.|.++.
T Consensus 321 ~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~-Gt~V~~~~ 399 (502)
T PLN02426 321 SKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAK-GTRVTYHP 399 (502)
T ss_pred hcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECC-CCEEEEch
Confidence 4799999999999999987643 5789999999999999999999999999666888888877 8999999 99999999
Q ss_pred eecccCCCCCCC-CC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCccc
Q 043044 79 YVENKKGHTQVW-DL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAH 131 (132)
Q Consensus 79 ~~~~~~~~~~~~-~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a 131 (132)
|++||| +++| ++ +|+||||++.+ . .....+..|+|||.|+|.|+|+++|
T Consensus 400 ~~~~rd--~~~~G~dp~~F~PeRwl~~~-~-~~~~~~~~~~pFg~G~R~CiG~~~A 451 (502)
T PLN02426 400 YAMGRM--ERIWGPDCLEFKPERWLKNG-V-FVPENPFKYPVFQAGLRVCLGKEMA 451 (502)
T ss_pred HHhcCC--ccccCcChhhcCccccCCCC-C-cCCCCCcccCCCCCCCCCCccHHHH
Confidence 999999 9999 66 99999999642 1 1123356799999999999999988
No 26
>PLN02936 epsilon-ring hydroxylase
Probab=100.00 E-value=8.1e-34 Score=212.89 Aligned_cols=128 Identities=25% Similarity=0.409 Sum_probs=109.7
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCcCccCcChhHHHHHHhhhcCCCCcc-ccccccccceeEcCEeeCCCCCcEEEeee
Q 043044 1 MKNLKAKKKAEEEVKSVVKKKGFVDEEYLPRLQHLKAVVKETMRFQPMAE-IISRETTEKCIINGYEIPAAETPVFVNMY 79 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~-~~~r~~~~~~~i~~~~ip~~g~~v~~~~~ 79 (132)
++||++|+++++||+++++.. .++++++.+|||++|||+|++|++|+.+ .++|.+..|+.++|+.||+ |+.|+++.+
T Consensus 306 ~~~p~~~~kl~~Ei~~~~~~~-~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~-Gt~v~~~~~ 383 (489)
T PLN02936 306 SKNPEALRKAQEELDRVLQGR-PPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNA-GQDIMISVY 383 (489)
T ss_pred hcCHHHHHHHHHHHHHHhcCC-CCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECC-CCEEEecHH
Confidence 479999999999999998864 4688889999999999999999999988 6666666777789999999 999999999
Q ss_pred ecccCCCCCCCCC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCcccC
Q 043044 80 VENKKGHTQVWDL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 80 ~~~~~~~~~~~~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
++|+| +++|++ +|+|+||+..+........+..|+|||.|+|.|+|++||.
T Consensus 384 ~~~rd--~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~ 436 (489)
T PLN02936 384 NIHRS--PEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFAL 436 (489)
T ss_pred hccCC--hhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHH
Confidence 99999 999999 9999999964311112223457999999999999999873
No 27
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00 E-value=6.5e-34 Score=212.15 Aligned_cols=122 Identities=20% Similarity=0.238 Sum_probs=109.9
Q ss_pred CCCHHHHHHHHHHHHHHHhc---CCCCCcCccCcChhHHHHHHhhhcCCCCccccccccccceeEcCEeeCCCCCcEEEe
Q 043044 1 MKNLKAKKKAEEEVKSVVKK---KGFVDEEYLPRLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFVN 77 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~---~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~~~~r~~~~~~~i~~~~ip~~g~~v~~~ 77 (132)
++||++|+|+++||+++++. +..++.+++.+++|+++||+|++|++|+.+...|.+.+|++++|+.||+ |+.|+++
T Consensus 292 ~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~Ipk-Gt~v~~~ 370 (463)
T PLN02196 292 AENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPK-GWKVLPL 370 (463)
T ss_pred HhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCC-CCEEEee
Confidence 47999999999999999864 2457888999999999999999999999886679999999999999999 9999999
Q ss_pred eeecccCCCCCCCCC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCcccC
Q 043044 78 MYVENKKGHTQVWDL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 78 ~~~~~~~~~~~~~~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
.+++|+| +++|++ +|+|+||++.. .+..++|||.|+|.|+|+++|+
T Consensus 371 ~~~~~rd--~~~~~dP~~F~PeRfl~~~-------~~~~~lpFG~G~r~C~G~~~A~ 418 (463)
T PLN02196 371 FRNIHHS--ADIFSDPGKFDPSRFEVAP-------KPNTFMPFGNGTHSCPGNELAK 418 (463)
T ss_pred HHHhcCC--chhcCCcCccChhhhcCCC-------CCCcccCcCCCCCCCchHHHHH
Confidence 9999999 999999 99999998641 2456999999999999999884
No 28
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00 E-value=1.6e-33 Score=210.90 Aligned_cols=123 Identities=22% Similarity=0.316 Sum_probs=110.0
Q ss_pred CCCHHHHHHHHHHHHHHHhcCC----CCCcCccCcChhHHHHHHhhhcCCCCccccccccccceeEcCEeeCCCCCcEEE
Q 043044 1 MKNLKAKKKAEEEVKSVVKKKG----FVDEEYLPRLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFV 76 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~~----~~~~~~~~~~~~l~~~i~E~lRl~p~~~~~~r~~~~~~~i~~~~ip~~g~~v~~ 76 (132)
++||++|+|+++|++++++... .++++++.++||++++|+|++|++|+.+...|.+.+|++++|+.||+ |+.|.+
T Consensus 315 ~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~-Gt~v~~ 393 (490)
T PLN02302 315 QEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPK-GWKVLA 393 (490)
T ss_pred HhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECC-CCEEEe
Confidence 4799999999999999987421 26788999999999999999999999887789999999999999999 999999
Q ss_pred eeeecccCCCCCCCCC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCcccC
Q 043044 77 NMYVENKKGHTQVWDL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 77 ~~~~~~~~~~~~~~~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
+.+++|+| +++|++ +|+|+||++.. ..+..++|||.|+|.|+|+++|.
T Consensus 394 ~~~~~~rd--~~~~~dP~~F~PeR~~~~~------~~~~~~~pFG~G~r~C~G~~lA~ 443 (490)
T PLN02302 394 WFRQVHMD--PEVYPNPKEFDPSRWDNYT------PKAGTFLPFGLGSRLCPGNDLAK 443 (490)
T ss_pred eHHHhcCC--cccCCCccccChhhcCCCC------CCCCCccCCCCCCcCCCcHHHHH
Confidence 99999999 999999 99999998642 23456999999999999999883
No 29
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.98 E-value=1.8e-32 Score=204.87 Aligned_cols=126 Identities=19% Similarity=0.229 Sum_probs=110.5
Q ss_pred CCCHHHHHHHHHHHHHHHhc---CCCCCcCccCcChhHHHHHHhhhcCCCCccccccccccceeEcCEeeCCCCCcEEEe
Q 043044 1 MKNLKAKKKAEEEVKSVVKK---KGFVDEEYLPRLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFVN 77 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~---~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~~~~r~~~~~~~i~~~~ip~~g~~v~~~ 77 (132)
++||++|+++++|++++.+. ...++.+++.++||++++++|++|++|+.+.++|.+.+|++++|+.||+ |+.|+++
T Consensus 295 ~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~-Gt~v~~~ 373 (472)
T PLN02987 295 TETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPK-GWKVFAS 373 (472)
T ss_pred HhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECC-CCEEEEe
Confidence 36999999999999998753 3446788899999999999999999999887789999999999999999 9999999
Q ss_pred eeecccCCCCCCCCC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCcccC
Q 043044 78 MYVENKKGHTQVWDL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 78 ~~~~~~~~~~~~~~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
.+.+|+| ++.|++ +|+|+||++.... ......++|||.|+|.|+|+++|.
T Consensus 374 ~~~~~~d--~~~~~~p~~F~PeRfl~~~~~---~~~~~~~l~FG~G~r~C~G~~lA~ 425 (472)
T PLN02987 374 FRAVHLD--HEYFKDARTFNPWRWQSNSGT---TVPSNVFTPFGGGPRLCPGYELAR 425 (472)
T ss_pred hHHhhCC--cccCCCccccCcccCCCCCCC---CCCCcceECCCCCCcCCCcHHHHH
Confidence 9999999 999999 9999999865211 123456999999999999999873
No 30
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.97 E-value=2.2e-31 Score=192.54 Aligned_cols=128 Identities=25% Similarity=0.430 Sum_probs=114.4
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCC-CCcCccCcChhHHHHHHhhhcCCCCccccccccccceeEcC----EeeCCCCCcEE
Q 043044 1 MKNLKAKKKAEEEVKSVVKKKGF-VDEEYLPRLQHLKAVVKETMRFQPMAEIISRETTEKCIING----YEIPAAETPVF 75 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~~~-~~~~~~~~~~~l~~~i~E~lRl~p~~~~~~r~~~~~~~i~~----~~ip~~g~~v~ 75 (132)
++||++++.+++|+.+++|+... ++++.++++|.|++||+|||||+|+.+.+.|.+.+|.++.+ |.||+ |..|.
T Consensus 301 l~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~-G~~va 379 (486)
T KOG0684|consen 301 LRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPK-GDIVA 379 (486)
T ss_pred hhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCC-CCEEE
Confidence 58999999999999999998764 89999999999999999999999998888899999999966 99999 99999
Q ss_pred EeeeecccCCCCCCCCC--CCCCCCCCCCCCCccc--CCCccceeeccCCCCCCCCCccc
Q 043044 76 VNMYVENKKGHTQVWDL--NKFPRDFMNPSSNVEL--GRQNFELIPFGARRRICPYCVAH 131 (132)
Q Consensus 76 ~~~~~~~~~~~~~~~~~--~f~p~Rf~~~~~~~~~--~~~~~~~~pFg~G~r~C~G~~~a 131 (132)
++..-+|++ |++|++ .|+|+||+++.++... ..-...|||||+|+++|||+.||
T Consensus 380 lsP~~~hr~--peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA 437 (486)
T KOG0684|consen 380 LSPFLLHRD--PEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFA 437 (486)
T ss_pred eccccccCC--ccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHH
Confidence 999999999 999999 9999999987544322 22344569999999999999998
No 31
>PLN02648 allene oxide synthase
Probab=99.96 E-value=4.1e-29 Score=186.93 Aligned_cols=124 Identities=21% Similarity=0.273 Sum_probs=104.6
Q ss_pred CCCHH-HHHHHHHHHHHHHhc-CCCCCcCccCcChhHHHHHHhhhcCCCCccccccccccceeEc----CEeeCCCCCcE
Q 043044 1 MKNLK-AKKKAEEEVKSVVKK-KGFVDEEYLPRLQHLKAVVKETMRFQPMAEIISRETTEKCIIN----GYEIPAAETPV 74 (132)
Q Consensus 1 ~~~p~-~q~~l~~Ei~~~~~~-~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~~~~r~~~~~~~i~----~~~ip~~g~~v 74 (132)
++||+ +|++|++||+++++. +..++.+++.+++|+++||+|+||++|+.+.+.|.+.+|+++. |+.||+ |+.|
T Consensus 300 ~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~Ipk-G~~V 378 (480)
T PLN02648 300 GRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKK-GEML 378 (480)
T ss_pred HcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECC-CCEE
Confidence 36885 999999999999863 3457889999999999999999999999997778888999996 799999 9999
Q ss_pred EEeeeecccCCCCCCCCC--CCCCCCCCCCCCCcccCCCccceeec---------cCCCCCCCCCcccC
Q 043044 75 FVNMYVENKKGHTQVWDL--NKFPRDFMNPSSNVELGRQNFELIPF---------GARRRICPYCVAHC 132 (132)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~--~f~p~Rf~~~~~~~~~~~~~~~~~pF---------g~G~r~C~G~~~a~ 132 (132)
.++.+.+|+| +++|++ .|+|+||+++.... ...+++| |.|+|.|+|++||.
T Consensus 379 ~~~~~~~hrd--p~~~~dP~~F~PeRf~~~~~~~-----~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~ 440 (480)
T PLN02648 379 FGYQPLVTRD--PKVFDRPEEFVPDRFMGEEGEK-----LLKYVFWSNGRETESPTVGNKQCAGKDFVV 440 (480)
T ss_pred EEChHHHhCC--cccCCCcceeCCCCCCCCCccc-----cccccccCCCcccCCCCCCCccCccHHHHH
Confidence 9999999999 999999 99999998642111 1224444 66789999999883
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.93 E-value=1.6e-26 Score=170.34 Aligned_cols=101 Identities=29% Similarity=0.422 Sum_probs=93.7
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCcCccCcChhHHHHHHhhhcCCCCccccccccccceeEcCEeeCCCCCcEEEeeee
Q 043044 1 MKNLKAKKKAEEEVKSVVKKKGFVDEEYLPRLQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFVNMYV 80 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~~~~~~r~~~~~~~i~~~~ip~~g~~v~~~~~~ 80 (132)
++||+.++++++|.+. +|+.++|+|+||++|+++.+.|.+.+|++++|+.||+ |+.|.++.++
T Consensus 264 ~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg~~Ip~-G~~V~~~~~~ 326 (411)
T COG2124 264 LRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVPLARRVATEDVELGGYRIPA-GTVVLLSIGA 326 (411)
T ss_pred HHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchhccceeccCCEeeCCEEeCC-CCEEEecHhh
Confidence 4689999999988765 8899999999999999998889999999999999999 9999999999
Q ss_pred cccCCCCCCCCC--CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCcccC
Q 043044 81 ENKKGHTQVWDL--NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCVAHC 132 (132)
Q Consensus 81 ~~~~~~~~~~~~--~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~a~ 132 (132)
.||| ++.|++ +|+|+||.+ .++|||+|+|.|+|..||+
T Consensus 327 anrD--p~~f~~P~~F~p~R~~~------------~~l~FG~G~H~ClG~~lA~ 366 (411)
T COG2124 327 ANRD--PEVFPDPDEFDPERFNN------------AHLPFGGGPHRCLGAALAR 366 (411)
T ss_pred hcCC--hhhCCChhhcCCCCCCC------------CCcCCCCCCccccCHHHHH
Confidence 9999 999999 999999973 3999999999999999984
No 33
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=77.29 E-value=0.89 Score=30.09 Aligned_cols=35 Identities=14% Similarity=0.208 Sum_probs=25.5
Q ss_pred CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCCc
Q 043044 93 NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYCV 129 (132)
Q Consensus 93 ~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~ 129 (132)
+|+|++|-.- --.+...+.+++.|.+|+-.|-|..
T Consensus 36 eYnP~qFpGl--v~Rl~ePk~a~LIF~SGK~VcTGaK 70 (185)
T COG2101 36 EYNPEQFPGL--VYRLEEPKTAALIFRSGKVVCTGAK 70 (185)
T ss_pred ccCHhHCCee--EEEecCCcceEEEEecCcEEEeccC
Confidence 8899888421 1234455677999999999999853
No 34
>PF14459 Prok-E2_C: Prokaryotic E2 family C
Probab=71.72 E-value=1.4 Score=26.91 Aligned_cols=19 Identities=26% Similarity=0.268 Sum_probs=15.2
Q ss_pred CCccceeeccCCCCCCCCC
Q 043044 110 RQNFELIPFGARRRICPYC 128 (132)
Q Consensus 110 ~~~~~~~pFg~G~r~C~G~ 128 (132)
+...+.+|||.|--.|+|.
T Consensus 102 g~gss~~p~GaGaAaC~aA 120 (131)
T PF14459_consen 102 GCGSSNNPFGAGAAACFAA 120 (131)
T ss_pred ccCcccCCcCccHHHHHHH
Confidence 3456789999999999864
No 35
>PF11138 DUF2911: Protein of unknown function (DUF2911); InterPro: IPR021314 This bacterial family of proteins has no known function.
Probab=68.35 E-value=10 Score=24.42 Aligned_cols=42 Identities=19% Similarity=0.232 Sum_probs=29.0
Q ss_pred ccccceeEcCEeeCCCCCcEEEe-----eeecccCCCCCCCCC-CCCCC
Q 043044 55 ETTEKCIINGYEIPAAETPVFVN-----MYVENKKGHTQVWDL-NKFPR 97 (132)
Q Consensus 55 ~~~~~~~i~~~~ip~~g~~v~~~-----~~~~~~~~~~~~~~~-~f~p~ 97 (132)
...+|+.|+|..||+ |++.+.. .|.+..+.+...|+. .++++
T Consensus 51 ~f~~dv~igGk~l~A-G~Ysl~tiP~~~~WtvI~n~~~~~wG~~~Y~~~ 98 (145)
T PF11138_consen 51 TFSKDVTIGGKKLKA-GTYSLFTIPGEDEWTVIFNKDTDQWGAYNYDPS 98 (145)
T ss_pred EECCCeEECCEEcCC-eeEEEEEecCCCeEEEEEECCCCccCccccCch
Confidence 346789999999999 9876654 244444433778887 66655
No 36
>PF08492 SRP72: SRP72 RNA-binding domain; InterPro: IPR013699 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=64.44 E-value=2.9 Score=22.62 Aligned_cols=10 Identities=10% Similarity=0.268 Sum_probs=8.0
Q ss_pred CCCCCCCCCC
Q 043044 93 NKFPRDFMNP 102 (132)
Q Consensus 93 ~f~p~Rf~~~ 102 (132)
.-||||||.-
T Consensus 42 ~PDPERWLP~ 51 (59)
T PF08492_consen 42 TPDPERWLPK 51 (59)
T ss_pred CCCccccCch
Confidence 4599999965
No 37
>cd04518 TBP_archaea archaeal TATA box binding protein (TBP): TBPs are transcription factors present in archaea and eukaryotes, that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=64.14 E-value=1.9 Score=28.57 Aligned_cols=34 Identities=15% Similarity=0.252 Sum_probs=24.9
Q ss_pred CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCC
Q 043044 93 NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYC 128 (132)
Q Consensus 93 ~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~ 128 (132)
+|+|++|-.- --.+.....+.+-|++|+=.|.|-
T Consensus 30 eY~P~~fpgl--i~Rl~~Pk~t~lIF~SGKiv~tGa 63 (174)
T cd04518 30 EYNPDQFPGL--VYRLEDPKIAALIFRSGKMVCTGA 63 (174)
T ss_pred EECCCcCcEE--EEEccCCcEEEEEECCCeEEEEcc
Confidence 8899998422 123344567789999999999885
No 38
>PRK00394 transcription factor; Reviewed
Probab=54.99 E-value=4.1 Score=27.19 Aligned_cols=34 Identities=15% Similarity=0.256 Sum_probs=24.6
Q ss_pred CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCC
Q 043044 93 NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYC 128 (132)
Q Consensus 93 ~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~ 128 (132)
+|+|++|-.- --.+.....+.+-|++|+=.|-|-
T Consensus 29 eYePe~fpgl--i~Rl~~Pk~t~lIf~sGKiv~tGa 62 (179)
T PRK00394 29 EYNPEQFPGL--VYRLEDPKIAALIFRSGKVVCTGA 62 (179)
T ss_pred eeCcccCceE--EEEecCCceEEEEEcCCcEEEEcc
Confidence 8899988432 123344567789999999999983
No 39
>PRK06789 flagellar motor switch protein; Validated
Probab=53.05 E-value=24 Score=19.97 Aligned_cols=40 Identities=10% Similarity=0.117 Sum_probs=30.2
Q ss_pred HHHHhhhcCCCCcc-ccccccccc--eeEcCEeeCCCCCcEEEe
Q 043044 37 AVVKETMRFQPMAE-IISRETTEK--CIINGYEIPAAETPVFVN 77 (132)
Q Consensus 37 ~~i~E~lRl~p~~~-~~~r~~~~~--~~i~~~~ip~~g~~v~~~ 77 (132)
.-++|.+.+.+... .+-+.+... +.++|..|.. |..+.++
T Consensus 20 ~~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~-GEvVvv~ 62 (74)
T PRK06789 20 KKIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGT-GKILTKN 62 (74)
T ss_pred eEHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeE-EeEEEEC
Confidence 34788899988766 676766654 5669999999 8877665
No 40
>cd00652 TBP_TLF TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA. New members of the TBP family, called TBP-like proteins (TBLP, TLF, TLP) or TBP-related factors (TRF1, TRF2,TRP), are similar to the core domain of TBPs, with identical or chemically similar amino acids at many
Probab=49.18 E-value=5 Score=26.62 Aligned_cols=34 Identities=12% Similarity=0.158 Sum_probs=24.3
Q ss_pred CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCC
Q 043044 93 NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYC 128 (132)
Q Consensus 93 ~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~ 128 (132)
+|+|++|-.- --.......+.+-|++|+=.|-|-
T Consensus 30 ~YePe~fpgl--i~R~~~P~~t~lIf~sGKivitGa 63 (174)
T cd00652 30 EYNPKRFPGV--IMRLREPKTTALIFSSGKMVITGA 63 (174)
T ss_pred EECCCccceE--EEEcCCCcEEEEEECCCEEEEEec
Confidence 8899988432 122334567789999999999884
No 41
>PLN00062 TATA-box-binding protein; Provisional
Probab=48.49 E-value=4.7 Score=26.93 Aligned_cols=34 Identities=12% Similarity=0.280 Sum_probs=23.7
Q ss_pred CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCC
Q 043044 93 NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYC 128 (132)
Q Consensus 93 ~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~ 128 (132)
+|+|++|-.- --.........+-|++|+=.|-|-
T Consensus 30 eYePe~fpgl--i~Rl~~Pk~t~lIF~SGKiviTGa 63 (179)
T PLN00062 30 EYNPKRFAAV--IMRIREPKTTALIFASGKMVCTGA 63 (179)
T ss_pred EECCccCcEE--EEEeCCCcEEEEEECCCeEEEEec
Confidence 7888888422 112334456789999999999884
No 42
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=47.63 E-value=4.2 Score=30.75 Aligned_cols=40 Identities=20% Similarity=0.223 Sum_probs=24.2
Q ss_pred hHHHHHHhhhcCCCCccccccccccceeEcCEeeCCCCCcEE
Q 043044 34 HLKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVF 75 (132)
Q Consensus 34 ~l~~~i~E~lRl~p~~~~~~r~~~~~~~i~~~~ip~~g~~v~ 75 (132)
.+.|||.++.-+.-..- +.-...+|+.+++..||+ |+.++
T Consensus 257 ~I~A~V~~~qtv~~G~~-vrlRLle~~~v~~~~ipk-gt~l~ 296 (410)
T TIGR03779 257 TIRACVHETQTVVDGSA-VKLRLLEPIQAGDLVIPK-GTVLY 296 (410)
T ss_pred ceEEEEcCceEEecCCE-EEEEEcCceeeCCEEecC-CCEEE
Confidence 35566666665433222 211235788889999999 77554
No 43
>PRK13989 cell division topological specificity factor MinE; Provisional
Probab=45.28 E-value=22 Score=20.61 Aligned_cols=19 Identities=16% Similarity=0.111 Sum_probs=13.0
Q ss_pred CHHHHHHHHHHHHHHHhcC
Q 043044 3 NLKAKKKAEEEVKSVVKKK 21 (132)
Q Consensus 3 ~p~~q~~l~~Ei~~~~~~~ 21 (132)
.|+..+++++||-+|+.+.
T Consensus 36 ~p~~l~~lk~dil~VIsKY 54 (84)
T PRK13989 36 PPDYLPALQKELVAVISKY 54 (84)
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 3677777777777776653
No 44
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=45.11 E-value=17 Score=21.32 Aligned_cols=19 Identities=16% Similarity=0.181 Sum_probs=13.8
Q ss_pred CHHHHHHHHHHHHHHHhcC
Q 043044 3 NLKAKKKAEEEVKSVVKKK 21 (132)
Q Consensus 3 ~p~~q~~l~~Ei~~~~~~~ 21 (132)
-|+..+.|++||-+|+.+.
T Consensus 35 ~pd~l~~Lr~eIl~VI~KY 53 (88)
T COG0851 35 QPDYLEQLRKEILEVISKY 53 (88)
T ss_pred CcchHHHHHHHHHHHHHHH
Confidence 3777788888887777654
No 45
>PF12508 DUF3714: Protein of unknown function (DUF3714) ; InterPro: IPR022187 Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=44.29 E-value=23 Score=24.12 Aligned_cols=43 Identities=26% Similarity=0.254 Sum_probs=29.9
Q ss_pred ChhHHHHHHhhhcCCCCccccccccccceeEcCEeeCCCCCcEEE
Q 043044 32 LQHLKAVVKETMRFQPMAEIISRETTEKCIINGYEIPAAETPVFV 76 (132)
Q Consensus 32 ~~~l~~~i~E~lRl~p~~~~~~r~~~~~~~i~~~~ip~~g~~v~~ 76 (132)
-..+.|||.|+.......-.-.| ..+|+.++|..||+ |+.++-
T Consensus 52 ~n~I~A~V~~~qtv~~Gs~vrlR-Lle~i~i~g~~IPk-gt~l~G 94 (200)
T PF12508_consen 52 KNTIRAVVDGTQTVVDGSRVRLR-LLEDIQIGGILIPK-GTYLYG 94 (200)
T ss_pred CCeEEEEEecceEEeCCCEEEEE-EcCceEECCEEeCC-CCEEEE
Confidence 34578999999876444332223 45789999999999 876543
No 46
>PRK13990 cell division topological specificity factor MinE; Provisional
Probab=44.04 E-value=28 Score=20.55 Aligned_cols=20 Identities=25% Similarity=0.205 Sum_probs=15.3
Q ss_pred CHHHHHHHHHHHHHHHhcCC
Q 043044 3 NLKAKKKAEEEVKSVVKKKG 22 (132)
Q Consensus 3 ~p~~q~~l~~Ei~~~~~~~~ 22 (132)
.|+..+++++||-+|+.+.-
T Consensus 41 ~pd~L~~lk~eIl~VI~KYv 60 (90)
T PRK13990 41 SSHLLAELKDEIIEVVKKYV 60 (90)
T ss_pred CHHHHHHHHHHHHHHHHHhe
Confidence 36888888888888877643
No 47
>PF15300 INT_SG_DDX_CT_C: INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=43.57 E-value=11 Score=20.72 Aligned_cols=16 Identities=38% Similarity=0.700 Sum_probs=13.1
Q ss_pred cChhHHHHHHhhhcCC
Q 043044 31 RLQHLKAVVKETMRFQ 46 (132)
Q Consensus 31 ~~~~l~~~i~E~lRl~ 46 (132)
+..++..+|+|++|+.
T Consensus 39 r~~fv~~~IkEA~RFk 54 (65)
T PF15300_consen 39 RKQFVEMIIKEAARFK 54 (65)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4457999999999974
No 48
>cd04516 TBP_eukaryotes eukaryotic TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=42.76 E-value=6.6 Score=26.08 Aligned_cols=34 Identities=12% Similarity=0.279 Sum_probs=23.3
Q ss_pred CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCC
Q 043044 93 NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYC 128 (132)
Q Consensus 93 ~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~ 128 (132)
+|+|++|-.- --.........+-|++|+=+|-|-
T Consensus 30 eYePe~fpgl--i~Rl~~Pk~t~lIF~SGKiviTGa 63 (174)
T cd04516 30 EYNPKRFAAV--IMRIREPKTTALIFSSGKMVCTGA 63 (174)
T ss_pred EECCccCcEE--EEEeCCCcEEEEEECCCeEEEEec
Confidence 7888887321 112333456689999999999883
No 49
>PF07886 BA14K: BA14K-like protein; InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process [].
Probab=41.51 E-value=27 Score=16.18 Aligned_cols=16 Identities=25% Similarity=0.667 Sum_probs=12.2
Q ss_pred CccceeeccCCCCCCC
Q 043044 111 QNFELIPFGARRRICP 126 (132)
Q Consensus 111 ~~~~~~pFg~G~r~C~ 126 (132)
...+|+++.+..|.|.
T Consensus 16 ~~~Ty~~~~G~r~~C~ 31 (31)
T PF07886_consen 16 RDNTYQPYDGPRRFCR 31 (31)
T ss_pred CCCcEeCCCCccccCc
Confidence 3456999997788884
No 50
>PF15054 DUF4535: Domain of unknown function (DUF4535)
Probab=40.82 E-value=7.7 Score=19.83 Aligned_cols=16 Identities=25% Similarity=0.212 Sum_probs=12.1
Q ss_pred eeeccCCCCCCCCCcccC
Q 043044 115 LIPFGARRRICPYCVAHC 132 (132)
Q Consensus 115 ~~pFg~G~r~C~G~~~a~ 132 (132)
.+.|+.| .|.|-.+||
T Consensus 3 ~fsF~~G--~~~GiY~AQ 18 (46)
T PF15054_consen 3 LFSFGAG--TYTGIYVAQ 18 (46)
T ss_pred eEEEeec--cEEEEEeee
Confidence 6788888 677777776
No 51
>PRK13987 cell division topological specificity factor MinE; Provisional
Probab=38.88 E-value=34 Score=20.21 Aligned_cols=18 Identities=17% Similarity=0.270 Sum_probs=11.9
Q ss_pred CHHHHHHHHHHHHHHHhc
Q 043044 3 NLKAKKKAEEEVKSVVKK 20 (132)
Q Consensus 3 ~p~~q~~l~~Ei~~~~~~ 20 (132)
.|+..+.+++||-+|+.+
T Consensus 33 sp~~l~~lk~eIl~VI~k 50 (91)
T PRK13987 33 SPDVLEMIKEDILKVISK 50 (91)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 366677777777766654
No 52
>KOG3302 consensus TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=38.33 E-value=11 Score=25.52 Aligned_cols=34 Identities=12% Similarity=0.261 Sum_probs=23.8
Q ss_pred CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCC
Q 043044 93 NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYC 128 (132)
Q Consensus 93 ~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~ 128 (132)
+|+|+||-.- -............|++|+=.|-|.
T Consensus 51 ey~Pk~~~aV--imrir~P~~ta~I~ssGKi~ctgA 84 (200)
T KOG3302|consen 51 EYNPKRFAAV--IMRIRSPRTTALIFSSGKIVCTGA 84 (200)
T ss_pred ccCcccccEE--EEEEcCCceEEEEecCCcEEEecc
Confidence 8999998421 112333455678999999999975
No 53
>PRK13991 cell division topological specificity factor MinE; Provisional
Probab=38.03 E-value=40 Score=19.72 Aligned_cols=18 Identities=11% Similarity=0.320 Sum_probs=11.5
Q ss_pred CHHHHHHHHHHHHHHHhc
Q 043044 3 NLKAKKKAEEEVKSVVKK 20 (132)
Q Consensus 3 ~p~~q~~l~~Ei~~~~~~ 20 (132)
.|+..+.+++||-+|+.+
T Consensus 35 ~p~~l~~lk~eil~VIsK 52 (87)
T PRK13991 35 TPEMMEQMKADLAEVIKR 52 (87)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 366666666666666554
No 54
>PHA01346 hypothetical protein
Probab=36.59 E-value=36 Score=17.02 Aligned_cols=15 Identities=27% Similarity=0.538 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHhc
Q 043044 6 AKKKAEEEVKSVVKK 20 (132)
Q Consensus 6 ~q~~l~~Ei~~~~~~ 20 (132)
.|+|+..|+++.+.+
T Consensus 33 sqekihaeldsllrk 47 (53)
T PHA01346 33 SQEKIHAELDSLLRK 47 (53)
T ss_pred cHHHHHHHHHHHHHH
Confidence 378888998887653
No 55
>PRK13988 cell division topological specificity factor MinE; Provisional
Probab=35.13 E-value=40 Score=20.18 Aligned_cols=19 Identities=16% Similarity=0.211 Sum_probs=13.1
Q ss_pred CHHHHHHHHHHHHHHHhcC
Q 043044 3 NLKAKKKAEEEVKSVVKKK 21 (132)
Q Consensus 3 ~p~~q~~l~~Ei~~~~~~~ 21 (132)
.|+..+++++||-+|+.+.
T Consensus 37 sp~~l~~mk~dIl~VIskY 55 (97)
T PRK13988 37 SPELLEQMRKEILEVVARY 55 (97)
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 3677777777777776653
No 56
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=35.02 E-value=18 Score=19.20 Aligned_cols=11 Identities=36% Similarity=0.688 Sum_probs=8.7
Q ss_pred eeccCCCCCCC
Q 043044 116 IPFGARRRICP 126 (132)
Q Consensus 116 ~pFg~G~r~C~ 126 (132)
-+||-|-|.|-
T Consensus 12 ~kfg~GsrsC~ 22 (56)
T KOG3506|consen 12 RKFGQGSRSCR 22 (56)
T ss_pred cccCCCCccee
Confidence 36899999884
No 57
>PRK14759 potassium-transporting ATPase subunit F; Provisional
Probab=33.89 E-value=18 Score=16.52 Aligned_cols=6 Identities=33% Similarity=0.523 Sum_probs=2.8
Q ss_pred CCCCCC
Q 043044 94 KFPRDF 99 (132)
Q Consensus 94 f~p~Rf 99 (132)
+.||||
T Consensus 24 lrPErF 29 (29)
T PRK14759 24 LRPERF 29 (29)
T ss_pred hCcccC
Confidence 345554
No 58
>PF00352 TBP: Transcription factor TFIID (or TATA-binding protein, TBP); InterPro: IPR000814 The TATA-box binding protein (TBP) is required for the initiation of transcription by RNA polymerases I, II and III, from promoters with or without a TATA box [, ]. TBP associates with a host of factors, including the general transcription factors TFIIA, -B, -D, -E, and -H, to form huge multi-subunit pre-initiation complexes on the core promoter. Through its association with different transcription factors, TBP can initiate transcription from different RNA polymerases. There are several related TBPs, including TBP-like (TBPL) proteins []. The C-terminal core of TBP (~180 residues) is highly conserved and contains two 77-amino acid repeats that produce a saddle-shaped structure that straddles the DNA; this region binds to the TATA box and interacts with transcription factors and regulatory proteins []. By contrast, the N-terminal region varies in both length and sequence.; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0006367 transcription initiation from RNA polymerase II promoter; PDB: 1D3U_A 1PCZ_B 1AIS_A 1NGM_A 1TBP_A 1TBA_B 1YTB_A 1RM1_A 1YTF_A 1NH2_A ....
Probab=33.78 E-value=4.4 Score=23.42 Aligned_cols=36 Identities=11% Similarity=0.108 Sum_probs=24.0
Q ss_pred CC-CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCC
Q 043044 91 DL-NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYC 128 (132)
Q Consensus 91 ~~-~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~ 128 (132)
.+ +|+|++|-.- --.........+-|..|+=.|.|-
T Consensus 29 ~~~~YePe~fpgl--~~r~~~p~~t~~IF~sGki~itGa 65 (86)
T PF00352_consen 29 ENVEYEPERFPGL--IYRLRNPKATVLIFSSGKIVITGA 65 (86)
T ss_dssp TTEEEETTTESSE--EEEETTTTEEEEEETTSEEEEEEE
T ss_pred cCcEEeeccCCeE--EEeecCCcEEEEEEcCCEEEEEec
Confidence 44 8899987321 112334466789999999888874
No 59
>PRK05933 type III secretion system protein; Validated
Probab=31.40 E-value=68 Score=23.82 Aligned_cols=43 Identities=14% Similarity=0.162 Sum_probs=33.2
Q ss_pred hHHHHHHhhhcCCCCcc-cccccc---ccceeEcCEeeCCCCCcEEEe
Q 043044 34 HLKAVVKETMRFQPMAE-IISRET---TEKCIINGYEIPAAETPVFVN 77 (132)
Q Consensus 34 ~l~~~i~E~lRl~p~~~-~~~r~~---~~~~~i~~~~ip~~g~~v~~~ 77 (132)
-.+.-|+|.++|.+... .+-+.+ .-|+.++|..|.+ |..|.++
T Consensus 316 RT~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIAR-GEVVVVd 362 (372)
T PRK05933 316 RYSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGR-GEIIALG 362 (372)
T ss_pred cccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEee-eeEEEEC
Confidence 46778999999988766 564543 3467889999999 9988775
No 60
>PF10965 DUF2767: Protein of unknown function (DUF2767); InterPro: IPR024493 This family of proteins with unknown function appears to be restricted to Enterobacteriaceae.
Probab=29.42 E-value=77 Score=17.72 Aligned_cols=20 Identities=30% Similarity=0.268 Sum_probs=16.0
Q ss_pred CCCHHHHHHHHHHHHHHHhc
Q 043044 1 MKNLKAKKKAEEEVKSVVKK 20 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~ 20 (132)
+.+.+.-+.+++|+..++|+
T Consensus 1 M~~~~~~~~~Y~EmCRVVGd 20 (69)
T PF10965_consen 1 MKNDAKSDRLYQEMCRVVGD 20 (69)
T ss_pred CCchHHHHHHHHHHHHHHHH
Confidence 35667778899999999885
No 61
>TIGR01215 minE cell division topological specificity factor MinE. This protein is involved in the process of cell division. This protein prevents the proteins MinC and MinD to inhibit cell division at internal sites, but allows inhibiton at polar sites. This allows for correct cell division at the proper sites.
Probab=28.91 E-value=50 Score=18.96 Aligned_cols=17 Identities=18% Similarity=0.237 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHhc
Q 043044 4 LKAKKKAEEEVKSVVKK 20 (132)
Q Consensus 4 p~~q~~l~~Ei~~~~~~ 20 (132)
|+..+++++||-+|+.+
T Consensus 35 p~~l~~mk~dil~VIsk 51 (81)
T TIGR01215 35 PEYLEELRKEILEVISK 51 (81)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 55566666666655554
No 62
>PRK00296 minE cell division topological specificity factor MinE; Reviewed
Probab=26.95 E-value=63 Score=18.81 Aligned_cols=16 Identities=13% Similarity=0.129 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHHHh
Q 043044 4 LKAKKKAEEEVKSVVK 19 (132)
Q Consensus 4 p~~q~~l~~Ei~~~~~ 19 (132)
|+..+++++||-+|+.
T Consensus 36 p~~l~~lk~dIl~VIs 51 (86)
T PRK00296 36 PDYLPQLRKEILEVIA 51 (86)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4444444444444443
No 63
>PF09388 SpoOE-like: Spo0E like sporulation regulatory protein; InterPro: IPR018540 Spore formation is an extreme response to starvation and can also be a component of disease transmission. Sporulation is controlled by an expanded two-component system where starvation signals result in sensor kinase activation and phosphorylation of the master sporulation response regulator Spo0A. Phosphatases such as Spo0E dephosphorylate Spo0A thereby inhibiting sporulation. This is a family of Spo0E-like phosphatases. The structure of a Bacillus anthracis member of this family has revealed an anti-parallel alpha-helical structure []. ; PDB: 2BZB_B 2C0S_A.
Probab=26.26 E-value=52 Score=16.33 Aligned_cols=39 Identities=26% Similarity=0.428 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHhcCCCCCcCccCcChhHHHHHHhhhcC
Q 043044 7 KKKAEEEVKSVVKKKGFVDEEYLPRLQHLKAVVKETMRF 45 (132)
Q Consensus 7 q~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl 45 (132)
-+.+|.++.......+..+.+-+....-+|..|.+-+|+
T Consensus 6 Ie~~R~~L~~~~~~~~l~~~~vl~~Sq~LD~lI~~y~~~ 44 (45)
T PF09388_consen 6 IEELRQELNELAEKKGLTDPEVLELSQELDKLINEYQKL 44 (45)
T ss_dssp HHHHHHHHHHHHHHCCTTCHHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhh
Confidence 356777777776665443444455556677777777653
No 64
>PLN03044 GTP cyclohydrolase I; Provisional
Probab=24.66 E-value=73 Score=21.53 Aligned_cols=19 Identities=5% Similarity=0.340 Sum_probs=15.4
Q ss_pred CCCHHHHHHHHHHHHHHHh
Q 043044 1 MKNLKAKKKAEEEVKSVVK 19 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~ 19 (132)
+++|.+||+|-.+|...+.
T Consensus 112 arRlQiQERLT~qIa~~l~ 130 (188)
T PLN03044 112 ARRLQTQERLTRQIADAIV 130 (188)
T ss_pred hcCcHHHHHHHHHHHHHHH
Confidence 4789999999999877654
No 65
>PF15442 DUF4629: Domain of unknown function (DUF4629)
Probab=24.45 E-value=24 Score=22.90 Aligned_cols=9 Identities=22% Similarity=0.135 Sum_probs=8.0
Q ss_pred CCCCCCCcc
Q 043044 122 RRICPYCVA 130 (132)
Q Consensus 122 ~r~C~G~~~ 130 (132)
||.|+|+++
T Consensus 128 PRs~LgMHM 136 (150)
T PF15442_consen 128 PRSCLGMHM 136 (150)
T ss_pred cccccchHH
Confidence 899999985
No 66
>PRK10292 hypothetical protein; Provisional
Probab=23.65 E-value=1.1e+02 Score=16.83 Aligned_cols=20 Identities=30% Similarity=0.252 Sum_probs=15.7
Q ss_pred CCCHHHHHHHHHHHHHHHhc
Q 043044 1 MKNLKAKKKAEEEVKSVVKK 20 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~~ 20 (132)
+.|+..-+.++.|...++|+
T Consensus 1 m~n~~~~d~lY~EmCRVVGd 20 (69)
T PRK10292 1 MGNRTKEDELYREMCRVVGK 20 (69)
T ss_pred CCchHHHHHHHHHHHHHHHH
Confidence 35667778899999998875
No 67
>PF14824 Sirohm_synth_M: Sirohaem biosynthesis protein central; PDB: 1KYQ_B.
Probab=23.47 E-value=94 Score=14.28 Aligned_cols=15 Identities=7% Similarity=0.237 Sum_probs=11.1
Q ss_pred CHHHHHHHHHHHHHH
Q 043044 3 NLKAKKKAEEEVKSV 17 (132)
Q Consensus 3 ~p~~q~~l~~Ei~~~ 17 (132)
-|.+-.++++||.+.
T Consensus 15 sP~la~~iR~~ie~~ 29 (30)
T PF14824_consen 15 SPRLARLIRKEIERL 29 (30)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHh
Confidence 377788889888764
No 68
>PF07055 Eno-Rase_FAD_bd: Enoyl reductase FAD binding domain; InterPro: IPR010758 This family contains a number of bacterial putative reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3S8M_A 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A.
Probab=23.22 E-value=39 Score=18.64 Aligned_cols=39 Identities=10% Similarity=0.146 Sum_probs=23.0
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCCcCccCcChhHHHHHHhhhcCCCC
Q 043044 3 NLKAKKKAEEEVKSVVKKKGFVDEEYLPRLQHLKAVVKETMRFQPM 48 (132)
Q Consensus 3 ~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~ 48 (132)
.|++|+++.+-. .. ++.+.+..+.-+..+-.|-++|...
T Consensus 16 ~~dvQ~~V~~lw----~~---it~en~~el~D~~gy~~eFl~L~GF 54 (65)
T PF07055_consen 16 RPDVQAEVAELW----EQ---ITTENFKELGDYDGYRQEFLQLFGF 54 (65)
T ss_dssp SHHHHHHHHHHH----CC---T-CCCHHHHS-HHHHHHHHHHHTT-
T ss_pred CHHHHHHHHHHH----HH---hccccHHHHHhHHHHHHHHHHHcCC
Confidence 356665555333 22 4556666667788888888888654
No 69
>cd00642 GTP_cyclohydro1 GTP cyclohydrolase I (GTP-CH-I) catalyzes the conversion of GTP into dihydroneopterin triphosphate. The enzyme product is the precursor of tetrahydrofolate in eubacteria, fungi, and plants and of the folate analogs in methanogenic bacteria. In vertebrates and insects it is the biosynthtic precursor of tetrahydrobiopterin (BH4) which is involved in the formation of catacholamines, nitric oxide, and the stimulation of T lymphocytes. The biosynthetic reaction of BH4 is controlled by a regulatory protein GFRP which mediates feedback inhibition of GTP-CH-I by BH4. This inhibition is reversed by phenylalanine. The decameric GTP-CH-I forms a complex with two pentameric GFRP in the presence of phenylalanine or a combination of GTP and BH4, respectively.
Probab=23.00 E-value=80 Score=21.27 Aligned_cols=19 Identities=5% Similarity=0.363 Sum_probs=15.4
Q ss_pred CCCHHHHHHHHHHHHHHHh
Q 043044 1 MKNLKAKKKAEEEVKSVVK 19 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~ 19 (132)
+++|.+||+|-.+|...+.
T Consensus 111 arRlQiQERLt~qIa~al~ 129 (185)
T cd00642 111 SRRLQVQERLTKQIAVAIQ 129 (185)
T ss_pred hcCchHHHHHHHHHHHHHH
Confidence 4689999999999877654
No 70
>TIGR02115 potass_kdpF K+-transporting ATPase, KdpF subunit. This model describes a very small integral membrane peptide KdpF, a subunit of the K(+)-translocating Kdp complex. It is found upstream of the KdpA subunit (TIGR00680). Because of its very small size and highly hydrophobic character, it is sometimes missed in genome annotation.
Probab=22.63 E-value=20 Score=15.94 Aligned_cols=7 Identities=29% Similarity=0.339 Sum_probs=4.0
Q ss_pred CCCCCCC
Q 043044 94 KFPRDFM 100 (132)
Q Consensus 94 f~p~Rf~ 100 (132)
++||||.
T Consensus 19 l~PErF~ 25 (26)
T TIGR02115 19 LRPERFX 25 (26)
T ss_pred hCHHhcC
Confidence 4566663
No 71
>COG1886 FliN Flagellar motor switch/type III secretory pathway protein [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=22.30 E-value=1.2e+02 Score=19.13 Aligned_cols=42 Identities=19% Similarity=0.189 Sum_probs=30.0
Q ss_pred HHHHHHhhhcCCCCcc-cccccccc--ceeEcCEeeCCCCCcEEEe
Q 043044 35 LKAVVKETMRFQPMAE-IISRETTE--KCIINGYEIPAAETPVFVN 77 (132)
Q Consensus 35 l~~~i~E~lRl~p~~~-~~~r~~~~--~~~i~~~~ip~~g~~v~~~ 77 (132)
.+.-++|.++|..... .+.+.+.. |+.++|..|-. |..|.++
T Consensus 82 ~~~~l~ell~l~~Gsvi~Ld~~~~~~VdI~vNg~~Ig~-GEvVvvd 126 (136)
T COG1886 82 TKMPLGELLALGKGSVIELDKLAGEPVDILVNGRLIGR-GEVVVVD 126 (136)
T ss_pred eeeeHHHHHhcCCCCEEEcCCcCCCceEEEECCEEEEE-EeEEEEC
Confidence 4466888888877655 56666654 45668999999 8877664
No 72
>cd04517 TLF TBP-like factors (TLF; also called TLP, TRF, TRP), which are found in most metazoans. TLFs and TBPs have well-conserved core domains; however, they only share about 60% similarity. TLFs, like TBPs, interact with TFIIA and TFIIB, which are part of the basal transcription machinery. Yet, in contrast to TBPs, TLFs seem not to interact with the TATA-box and even have a negative effect on the transcription of TATA-containing promoters. Recent results indicate that TLFs are involved in the transcription via TATA-less promoters.
Probab=22.18 E-value=23 Score=23.48 Aligned_cols=33 Identities=6% Similarity=0.031 Sum_probs=22.5
Q ss_pred CCCCCCCCCCCCCcccCCCccceeeccCCCCCCCCC
Q 043044 93 NKFPRDFMNPSSNVELGRQNFELIPFGARRRICPYC 128 (132)
Q Consensus 93 ~f~p~Rf~~~~~~~~~~~~~~~~~pFg~G~r~C~G~ 128 (132)
+|+| +|-.- .-.........+-|+.|+=.|-|-
T Consensus 31 eYeP-~fpgl--i~R~~~Pk~t~lIF~sGKiviTGa 63 (174)
T cd04517 31 EYNP-RYPKV--TMRLREPRATASVWSSGKITITGA 63 (174)
T ss_pred EEeC-CCCEE--EEEecCCcEEEEEECCCeEEEEcc
Confidence 7888 87322 112333455789999999999885
No 73
>TIGR00063 folE GTP cyclohydrolase I. GTP cyclohydrolase I (EC 3.5.4.16) catalyzes the biosynthesis of formic acid and dihydroneopterin triphosphate from GTP. This reaction is the first step in the biosynthesis of tetrahydrofolate in prokaryotes, of tetrahydrobiopterin in vertebrates, and of pteridine-containing pigments in insects.
Probab=21.89 E-value=87 Score=21.00 Aligned_cols=19 Identities=0% Similarity=0.272 Sum_probs=15.2
Q ss_pred CCCHHHHHHHHHHHHHHHh
Q 043044 1 MKNLKAKKKAEEEVKSVVK 19 (132)
Q Consensus 1 ~~~p~~q~~l~~Ei~~~~~ 19 (132)
+++|.+||+|-.+|...+.
T Consensus 106 arRlQiQERlT~qIa~~l~ 124 (180)
T TIGR00063 106 ARRPQVQERLTQQIAEALQ 124 (180)
T ss_pred hcCchHHHHHHHHHHHHHH
Confidence 4689999999999876554
No 74
>PF11998 DUF3493: Protein of unknown function (DUF3493); InterPro: IPR021883 This family of proteins is functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 79 to 331 amino acids in length.
Probab=20.62 E-value=85 Score=17.84 Aligned_cols=14 Identities=7% Similarity=0.159 Sum_probs=11.9
Q ss_pred CHHHHHHHHHHHHH
Q 043044 3 NLKAKKKAEEEVKS 16 (132)
Q Consensus 3 ~p~~q~~l~~Ei~~ 16 (132)
+|+...||++|+++
T Consensus 2 ~~~~~~rLraE~~a 15 (75)
T PF11998_consen 2 DPEQYARLRAEAQA 15 (75)
T ss_pred CHHHHHHHHHHHHC
Confidence 68889999999865
Done!