Query 043046
Match_columns 103
No_of_seqs 118 out of 1064
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 12:16:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043046.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043046hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG3000 ERG3 Sterol desaturase 99.9 9.4E-26 2E-30 165.8 9.4 101 1-101 136-244 (271)
2 KOG0872 Sterol C5 desaturase [ 99.9 4.7E-26 1E-30 166.1 3.6 97 2-98 170-267 (312)
3 KOG0873 C-4 sterol methyl oxid 99.8 1.7E-21 3.7E-26 143.0 4.4 92 5-96 165-262 (283)
4 PLN02869 fatty aldehyde decarb 99.8 7.9E-21 1.7E-25 151.0 7.3 97 1-98 168-280 (620)
5 KOG0874 Sphingolipid hydroxyla 99.8 2.8E-21 6.1E-26 138.0 -1.6 100 4-103 167-275 (287)
6 PF04116 FA_hydroxylase: Fatty 99.1 3.1E-10 6.8E-15 72.3 6.0 71 1-71 38-114 (114)
7 PLN02434 fatty acid hydroxylas 98.1 5E-06 1.1E-10 60.6 5.5 32 64-95 199-231 (237)
8 KOG0539 Sphingolipid fatty aci 97.1 0.00079 1.7E-08 48.5 4.4 37 64-102 202-239 (240)
9 PF10520 Kua-UEV1_localn: Kua- 94.7 0.033 7.1E-07 39.1 2.9 32 60-91 124-156 (178)
10 PRK07424 bifunctional sterol d 90.2 0.39 8.5E-06 37.6 3.7 34 60-93 141-175 (406)
11 KOG3011 Ubiquitin-conjugating 86.8 0.86 1.9E-05 33.9 3.3 29 60-88 231-260 (293)
12 KOG1600 Fatty acid desaturase 63.9 10 0.00022 29.1 3.4 39 63-102 122-167 (321)
13 PF08172 CASP_C: CASP C termin 47.6 36 0.00079 25.0 4.1 39 1-39 180-238 (248)
14 PF06643 DUF1158: Protein of u 41.1 82 0.0018 19.1 4.9 25 9-33 2-30 (82)
15 cd03505 Delta9-FADS-like The D 33.0 20 0.00043 25.1 0.7 13 63-75 58-70 (178)
16 PLN02601 beta-carotene hydroxy 30.6 33 0.00072 26.0 1.5 42 41-82 219-272 (303)
17 PLN02220 delta-9 acyl-lipid de 26.3 22 0.00049 26.9 0.0 28 63-90 111-145 (299)
No 1
>COG3000 ERG3 Sterol desaturase [Lipid metabolism]
Probab=99.93 E-value=9.4e-26 Score=165.84 Aligned_cols=101 Identities=23% Similarity=0.363 Sum_probs=91.0
Q ss_pred CCcchhcccCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhhccCcccC----CCC--cCCCchhhhhhcCC-
Q 043046 1 MGLFHGLAFHPLDGILQAVPHVIALFIVPTHFTTHLGLLFLEAIWTTNIHDCIHGK----LWP--WMGAGYHTIHHTTY- 73 (103)
Q Consensus 1 ~tp~t~~~~Hp~E~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~Hsg~~~~----~~~--~~~~~~H~~HH~~~- 73 (103)
++|+|++|+||+|.++......++++++|.++.++.++..+..++++++|||++.+ |.. +++|++|++||+++
T Consensus 136 ~~~~t~~~~hp~e~ll~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~v~~~p~~H~lHH~~~~ 215 (271)
T COG3000 136 PDPLTALRFHPLEILLLAFLGLLPLLLLGLSPVAVALLFIFLLFWAVLIHSNLDLPLPLGWLRYVFNTPRHHRLHHSKDP 215 (271)
T ss_pred CCchhhhhcChHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCccccCCcccceeeecCchHHHHhccCCC
Confidence 57999999999999999999999999999999999999999999999999999864 211 69999999999987
Q ss_pred -CCCccCCchhHHhhcCCCCCCCCCcCcC
Q 043046 74 -RHNYGHYTIWMDWMLGTLCDPADDDWGK 101 (103)
Q Consensus 74 -~~NyG~~~~~WDrlfGT~~~~~~~~~~~ 101 (103)
++|||..|++|||+|||+..|+++..+|
T Consensus 216 ~~~Nyg~~~~~WDrlFGT~~~~~~~~~~~ 244 (271)
T COG3000 216 YDKNYGVTLTFWDRLFGTYHPPDEREPDK 244 (271)
T ss_pred CCCcchhhhHHHHHHcccCCCCcccCccc
Confidence 4999999999999999999887765444
No 2
>KOG0872 consensus Sterol C5 desaturase [Lipid transport and metabolism]
Probab=99.92 E-value=4.7e-26 Score=166.08 Aligned_cols=97 Identities=49% Similarity=0.801 Sum_probs=91.9
Q ss_pred CcchhcccCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhhccCcccCCC-CcCCCchhhhhhcCCCCCccCC
Q 043046 2 GLFHGLAFHPLDGILQAVPHVIALFIVPTHFTTHLGLLFLEAIWTTNIHDCIHGKLW-PWMGAGYHTIHHTTYRHNYGHY 80 (103)
Q Consensus 2 tp~t~~~~Hp~E~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~Hsg~~~~~~-~~~~~~~H~~HH~~~~~NyG~~ 80 (103)
||||+.++||+|.++|++|..+.++++|+|+.++++...+..+|++.+|.|.-.... ++++|++|++||.++|.|||++
T Consensus 170 tpfAslafhpidg~lqaip~~I~~Fi~Plh~~t~L~l~~f~~iwt~~IHd~~~~~l~~~ingaahHtvHH~~f~~NYG~~ 249 (312)
T KOG0872|consen 170 TPFASLAFHPIDGFLQAIPYHIYPFIFPLHKVTYLSLFTFVNIWTISIHDGIYGSLNPPINGAAHHTVHHTYFDYNYGQY 249 (312)
T ss_pred CchhhhhcCcchhHhhhchhHheeeeecchHHHHHHHHHHHHhHheeeeccccccccCccccccccceeeeeEecCCCcE
Confidence 899999999999999999999999999999999999999999999999999877644 4899999999999999999999
Q ss_pred chhHHhhcCCCCCCCCCc
Q 043046 81 TIWMDWMLGTLCDPADDD 98 (103)
Q Consensus 81 ~~~WDrlfGT~~~~~~~~ 98 (103)
|++|||+|||++.|+.++
T Consensus 250 tilwDrmfgSfr~p~~~~ 267 (312)
T KOG0872|consen 250 TILWDRMFGSFRAPDHED 267 (312)
T ss_pred EEeHHhccCcccCccccc
Confidence 999999999999997764
No 3
>KOG0873 consensus C-4 sterol methyl oxidase [Lipid transport and metabolism]
Probab=99.84 E-value=1.7e-21 Score=143.00 Aligned_cols=92 Identities=21% Similarity=0.223 Sum_probs=83.4
Q ss_pred hhcccCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhhccCcccCCC-----C-cCCCchhhhhhcCCCCCcc
Q 043046 5 HGLAFHPLDGILQAVPHVIALFIVPTHFTTHLGLLFLEAIWTTNIHDCIHGKLW-----P-WMGAGYHTIHHTTYRHNYG 78 (103)
Q Consensus 5 t~~~~Hp~E~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~Hsg~~~~~~-----~-~~~~~~H~~HH~~~~~NyG 78 (103)
|+.+.||+|.++.+++..+.+.+++.|+.+.++|+++++..++..||||++||. | ..++++||+||..+.+||.
T Consensus 165 sa~YaHp~E~~~lg~~~~~~p~~~~~H~~t~wiw~~l~i~~t~~~HsGY~fPwsl~~~~pfy~ga~~HD~HH~~f~~n~~ 244 (283)
T KOG0873|consen 165 SAEYAHPLEHLFLGLGTVMGPALLCGHVITLWIWIALRILETVESHSGYDFPWSLSKLIPFYGGAEHHDYHHLVFIGNFA 244 (283)
T ss_pred hhhhcCHHHHHHcCChhhhhhHHhhhHHHHHHHHHHHHHHHHhhccCCCCCCccccccCcccCCCcccchhhhhcccccc
Confidence 578899999999998787777778889999999999999999999999999985 3 3689999999999999999
Q ss_pred CCchhHHhhcCCCCCCCC
Q 043046 79 HYTIWMDWMLGTLCDPAD 96 (103)
Q Consensus 79 ~~~~~WDrlfGT~~~~~~ 96 (103)
..|+.|||++||.+..++
T Consensus 245 ~~f~~~D~i~GTd~~~~~ 262 (283)
T KOG0873|consen 245 SVFGYLDRIHGTDSTYRA 262 (283)
T ss_pred chhHHHHHHhccCccHhh
Confidence 999999999999976543
No 4
>PLN02869 fatty aldehyde decarbonylase
Probab=99.83 E-value=7.9e-21 Score=150.99 Aligned_cols=97 Identities=21% Similarity=0.329 Sum_probs=75.1
Q ss_pred CCcchhcccCHH-HHHHHHHHHHHHHH----hccccHHHHHHHHHHHHHHHhhhccCccc-CC------CC----cCCCc
Q 043046 1 MGLFHGLAFHPL-DGILQAVPHVIALF----IVPTHFTTHLGLLFLEAIWTTNIHDCIHG-KL------WP----WMGAG 64 (103)
Q Consensus 1 ~tp~t~~~~Hp~-E~~l~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~Hsg~~~-~~------~~----~~~~~ 64 (103)
++|+|++ +||+ |.+...+...+|++ ..+.++.++++++++..+.++++|||+++ ++ .+ ++||+
T Consensus 168 ~~P~Ts~-~HP~~E~L~y~ll~~IPLllli~~g~~hi~t~~~yli~~~f~~~~gHSN~El~P~~~~~~~ppLkyll~TPs 246 (620)
T PLN02869 168 TEPITSV-IHPFAEHIAYFLLFAIPLLTTIFTGTASIAAFFGYISYIDFMNNMGHCNFELIPKWLFSIFPPLKYLMYTPS 246 (620)
T ss_pred CCchhhh-cCcHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHhcccccCccccccchhccCCcchheecCch
Confidence 4799987 7986 55554433333333 22467888999999999999999999984 32 12 58999
Q ss_pred hhhhhhcCCCCCccCCchhHHhhcCCCCCCCCCc
Q 043046 65 YHTIHHTTYRHNYGHYTIWMDWMLGTLCDPADDD 98 (103)
Q Consensus 65 ~H~~HH~~~~~NyG~~~~~WDrlfGT~~~~~~~~ 98 (103)
+|++||+++++|||.+|++|||+|||+..+++++
T Consensus 247 fHdlHHs~fd~NYGlfF~~WDrLFGT~d~~s~~l 280 (620)
T PLN02869 247 YHSLHHTQFRTNYSLFMPIYDYIYGTMDKSSDTL 280 (620)
T ss_pred HHhHHhccCCcCcccchHHHHhccCCCCCCchhH
Confidence 9999999999999999999999999997665543
No 5
>KOG0874 consensus Sphingolipid hydroxylase [Lipid transport and metabolism]
Probab=99.80 E-value=2.8e-21 Score=138.00 Aligned_cols=100 Identities=23% Similarity=0.306 Sum_probs=86.9
Q ss_pred chhcccCHHHHHHHH-HHHHHHHHhccccHHHHHHHHHHHHHHHhhhccCcccCCCC----c-CCCchhhhhhcC--CCC
Q 043046 4 FHGLAFHPLDGILQA-VPHVIALFIVPTHFTTHLGLLFLEAIWTTNIHDCIHGKLWP----W-MGAGYHTIHHTT--YRH 75 (103)
Q Consensus 4 ~t~~~~Hp~E~~l~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~Hsg~~~~~~~----~-~~~~~H~~HH~~--~~~ 75 (103)
+.|.+.||+|.++.. +...+..++-|+++.+.++++++.++-++.+|||+.+|..| + +++++||+||+. .++
T Consensus 167 yGALyNhP~EGllLDT~G~gla~l~sglspr~aiifFtfaTiKTVDDHCGy~lP~dpfqm~F~NNa~YHDiHHQ~yG~k~ 246 (287)
T KOG0874|consen 167 YGALYNHPVEGLLLDTIGGGLAFLLSGLSPRTAIIFFTFATIKTVDDHCGYWLPGDPFQMFFPNNAAYHDIHHQLYGTKY 246 (287)
T ss_pred hhhhhcCcchhhhhhhhchHHHHHHcCCCccceEEEEEeeeeeeeccccccccCCCceeEeccCCchhhhhhhhhhcccc
Confidence 568999999999998 66778888889999999999999999999999999987665 2 899999999995 479
Q ss_pred CccC-CchhHHhhcCCCCCCCCCcCcCCC
Q 043046 76 NYGH-YTIWMDWMLGTLCDPADDDWGKTK 103 (103)
Q Consensus 76 NyG~-~~~~WDrlfGT~~~~~~~~~~~~~ 103 (103)
||++ +|++|||++|||..++.|.+.+||
T Consensus 247 NFsQPFFtfWD~ilgTYmp~~~E~~~ekk 275 (287)
T KOG0874|consen 247 NFSQPFFTFWDRILGTYMPYSLEKRLEKK 275 (287)
T ss_pred ccCCcHHHHHHHHHhhcCCchhccccccc
Confidence 9997 999999999999887666555544
No 6
>PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases. Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways []. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins.; GO: 0005506 iron ion binding, 0016491 oxidoreductase activity, 0006633 fatty acid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.09 E-value=3.1e-10 Score=72.31 Aligned_cols=71 Identities=25% Similarity=0.448 Sum_probs=60.0
Q ss_pred CCcchhcccCHHHHHHHHHHHH-HHHHhccccHHHHHHHHHHHHHHHhhhccCcccCCC---C--cCCCchhhhhhc
Q 043046 1 MGLFHGLAFHPLDGILQAVPHV-IALFIVPTHFTTHLGLLFLEAIWTTNIHDCIHGKLW---P--WMGAGYHTIHHT 71 (103)
Q Consensus 1 ~tp~t~~~~Hp~E~~l~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~Hsg~~~~~~---~--~~~~~~H~~HH~ 71 (103)
++|+++.+.+|+|.++..++.. ++.++.+.++.++.++.++..+.+.++|||+..+.. . ..++++|++||+
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~H~~HH~ 114 (114)
T PF04116_consen 38 PTPLSAFRFHPLEALLLALLPLLLPLLLLPFHALAFLLGIALFYLWYIFIHSGYHHRFPPRLRYLFVTPRHHDLHHS 114 (114)
T ss_pred cCchHHHHcChHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHhhcCccCCCCCcchhHhcCHHHHHhhCc
Confidence 4789999999999999995554 566778999999999999999999999999943221 1 589999999996
No 7
>PLN02434 fatty acid hydroxylase
Probab=98.15 E-value=5e-06 Score=60.58 Aligned_cols=32 Identities=28% Similarity=0.405 Sum_probs=27.7
Q ss_pred chhhhhhcC-CCCCccCCchhHHhhcCCCCCCC
Q 043046 64 GYHTIHHTT-YRHNYGHYTIWMDWMLGTLCDPA 95 (103)
Q Consensus 64 ~~H~~HH~~-~~~NyG~~~~~WDrlfGT~~~~~ 95 (103)
++|..||-+ .+.|||....+|||+|||..+++
T Consensus 199 r~H~~HHfk~~~~~fGVTs~~wD~vFGT~~~~~ 231 (237)
T PLN02434 199 KYHLNHHFRDQDKGFGITSSLWDRVFGTLPPSK 231 (237)
T ss_pred HHHHHHcCCCCCCCCCcCchHHHHhcCCCCCcc
Confidence 789999975 68999999999999999995443
No 8
>KOG0539 consensus Sphingolipid fatty acid hydroxylase [Lipid transport and metabolism]
Probab=97.13 E-value=0.00079 Score=48.48 Aligned_cols=37 Identities=27% Similarity=0.333 Sum_probs=28.4
Q ss_pred chhhhhhc-CCCCCccCCchhHHhhcCCCCCCCCCcCcCC
Q 043046 64 GYHTIHHT-TYRHNYGHYTIWMDWMLGTLCDPADDDWGKT 102 (103)
Q Consensus 64 ~~H~~HH~-~~~~NyG~~~~~WDrlfGT~~~~~~~~~~~~ 102 (103)
++|--||- ..+.-||....+||++|||.-..+ ..+|.
T Consensus 202 ~yHl~HHfk~q~~GfGItS~lWD~VFgTl~~~~--~~~k~ 239 (240)
T KOG0539|consen 202 KYHLNHHFKHQDLGFGITSSLWDYVFGTLGPLK--PLYKL 239 (240)
T ss_pred HHHhhhhhhccccCccccHHHHHHHhccCCCCc--ccccc
Confidence 56666776 578999999999999999996554 44444
No 9
>PF10520 Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme hybrid localisation domain; InterPro: IPR019547 This entry represents part of the transcript of the fusion of two genes, the UEV1. UEV1 is an enzymatically inactive variant of the E2 ubiquitin-conjugating enzymes that regulate non-canonical elongation of ubiquitin chains, and Kua, an otherwise unknown gene. UEV1A is a nuclear protein, whereas both Kua and Kua-UEV localise to cytoplasmic structures, indicating that the addition of a Kua domain to UEV confers new biological properties. UEV1-Kua carries the B domain with its characteristic double histidine motif, and it is probably this domain which determines the cytoplasmic localisation. It is postulated that this hybrid transcript could preferentially direct the variant polyubiquitination of substrates closely associated with the cytoplasmic face of the endoplasmic reticulum, possibly, although not necessarily, in conjunction with membrane-bound ubiquitin-conjugating enzymes [].
Probab=94.71 E-value=0.033 Score=39.14 Aligned_cols=32 Identities=28% Similarity=0.423 Sum_probs=28.2
Q ss_pred cCCCchhhhhhcC-CCCCccCCchhHHhhcCCC
Q 043046 60 WMGAGYHTIHHTT-YRHNYGHYTIWMDWMLGTL 91 (103)
Q Consensus 60 ~~~~~~H~~HH~~-~~~NyG~~~~~WDrlfGT~ 91 (103)
+.++++|..||.. .++||+...++|+.+.-..
T Consensus 124 llsr~~H~~HH~aPh~~~YCI~tGw~N~~Ld~~ 156 (178)
T PF10520_consen 124 LLSRKHHRIHHVAPHDTNYCITTGWLNPPLDKI 156 (178)
T ss_pred ccCchhhhccccCcccCCeEeecccchHHHHHh
Confidence 6899999999997 8999999999999886543
No 10
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=90.20 E-value=0.39 Score=37.58 Aligned_cols=34 Identities=24% Similarity=0.328 Sum_probs=29.7
Q ss_pred cCCCchhhhhhcCCC-CCccCCchhHHhhcCCCCC
Q 043046 60 WMGAGYHTIHHTTYR-HNYGHYTIWMDWMLGTLCD 93 (103)
Q Consensus 60 ~~~~~~H~~HH~~~~-~NyG~~~~~WDrlfGT~~~ 93 (103)
++++.+|..||-..+ .-|+..+++-|++.||..+
T Consensus 141 ~v~~~~h~rh~~~~~~~~~~~~~~~~d~~~~ta~s 175 (406)
T PRK07424 141 FVNRPYHWRHHFDNQNAYYCGTFTLVDKLMGTALS 175 (406)
T ss_pred eecCceeEEEEeccccceeeeeEEEeehhcCcccC
Confidence 788999999998765 7789999999999999853
No 11
>KOG3011 consensus Ubiquitin-conjugating enzyme [Posttranslational modification, protein turnover, chaperones]
Probab=86.78 E-value=0.86 Score=33.88 Aligned_cols=29 Identities=28% Similarity=0.564 Sum_probs=24.0
Q ss_pred cCCCchhhhhhcC-CCCCccCCchhHHhhc
Q 043046 60 WMGAGYHTIHHTT-YRHNYGHYTIWMDWML 88 (103)
Q Consensus 60 ~~~~~~H~~HH~~-~~~NyG~~~~~WDrlf 88 (103)
+..-.+|++||.. .++||+...++|.+..
T Consensus 231 ilpRkhH~iHH~aPh~~yyCI~tGw~N~~L 260 (293)
T KOG3011|consen 231 ILPRKHHRIHHVAPHNTYYCIVSGWWNWVL 260 (293)
T ss_pred ecccccccccccCccccceEEeechhhchH
Confidence 5677999999996 5899999888887653
No 12
>KOG1600 consensus Fatty acid desaturase [Lipid transport and metabolism]
Probab=63.93 E-value=10 Score=29.10 Aligned_cols=39 Identities=21% Similarity=0.413 Sum_probs=30.2
Q ss_pred CchhhhhhcCC-------CCCccCCchhHHhhcCCCCCCCCCcCcCC
Q 043046 63 AGYHTIHHTTY-------RHNYGHYTIWMDWMLGTLCDPADDDWGKT 102 (103)
Q Consensus 63 ~~~H~~HH~~~-------~~NyG~~~~~WDrlfGT~~~~~~~~~~~~ 102 (103)
++.||.||++. +.+=|.+|+-.=+++-+.. |+.+.+|++
T Consensus 122 vrdHR~HHk~tdTD~DPhn~~rGF~FsHvgWl~~~k~-p~~k~~G~~ 167 (321)
T KOG1600|consen 122 VRDHRVHHKFTDTDADPHNPRRGFWFSHVGWLLDKKH-PQVKECGGR 167 (321)
T ss_pred HhhhhhhccccccCCCCCCcccchhhhhhhhHhccCC-hHHHhhcCc
Confidence 48999999974 5788999999999998884 444445554
No 13
>PF08172 CASP_C: CASP C terminal; InterPro: IPR012955 This domain is the C-terminal region of the CASP family of proteins. These are Golgi membrane proteins which are thought to have a role in vesicle transport [].; GO: 0006891 intra-Golgi vesicle-mediated transport, 0030173 integral to Golgi membrane
Probab=47.64 E-value=36 Score=25.01 Aligned_cols=39 Identities=13% Similarity=0.323 Sum_probs=22.2
Q ss_pred CCcchhcc----------cCHHHHHHHHH----------HHHHHHHhccccHHHHHHHH
Q 043046 1 MGLFHGLA----------FHPLDGILQAV----------PHVIALFIVPTHFTTHLGLL 39 (103)
Q Consensus 1 ~tp~t~~~----------~Hp~E~~l~~~----------~~~~~~~l~~~~~~~~~~~~ 39 (103)
|.||++++ ..|.|-++..+ -..+..+.+++|.+++++..
T Consensus 180 l~PF~~F~~~E~~R~~~~L~~~eR~~ls~~r~vL~nr~~R~~f~~Y~l~LH~lvf~~l~ 238 (248)
T PF08172_consen 180 LNPFAAFRKRERQRRYKRLSPPERIFLSLTRFVLSNRTTRMLFFFYCLGLHLLVFFVLY 238 (248)
T ss_pred cChHHHHhHhhHHHHHhcCChHHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHH
Confidence 46776654 67888776553 22344455566665544443
No 14
>PF06643 DUF1158: Protein of unknown function (DUF1158); InterPro: IPR010590 This family consists of several enterobacterial YbdJ proteins. The function of this family is unknown
Probab=41.12 E-value=82 Score=19.10 Aligned_cols=25 Identities=24% Similarity=0.479 Sum_probs=16.5
Q ss_pred cCHHHHHHHH----HHHHHHHHhccccHH
Q 043046 9 FHPLDGILQA----VPHVIALFIVPTHFT 33 (103)
Q Consensus 9 ~Hp~E~~l~~----~~~~~~~~l~~~~~~ 33 (103)
.||+|.++.. +...+.++++|-+..
T Consensus 2 k~pletl~~~~giLll~~LS~LLLPAP~~ 30 (82)
T PF06643_consen 2 KHPLETLLTAGGILLLAFLSCLLLPAPSL 30 (82)
T ss_pred CChHHHHHHHHHHHHHHHHHHHhcCCchh
Confidence 4899999876 233456667776544
No 15
>cd03505 Delta9-FADS-like The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide range of bacteria. These enzymes play essential roles in fatty acid metabolism and the regulation of cell membrane fluidity. Acyl-CoA desaturases are the enzymes involved in the CoA-bound desaturation of fatty acids. Mammalian stearoyl-CoA delta-9 desaturase is a key enzyme in the biosynthesis of monounsaturated fatty acids, and in yeast, the delta-9 acyl-CoA desaturase (OLE1) reaction accounts for all de nova unsaturated fatty acid production in Saccharomyces cerevisiae. These non-heme, iron-containing, ER membrane-bound enzymes are part of a three-component enzyme system involving cytochrome b5, cytochrome b5 reductase, and the delta-9 fatty acid desaturase. This complex catalyzes the NADH- and oxygen-dependent i
Probab=32.99 E-value=20 Score=25.12 Aligned_cols=13 Identities=23% Similarity=0.355 Sum_probs=10.7
Q ss_pred CchhhhhhcCCCC
Q 043046 63 AGYHTIHHTTYRH 75 (103)
Q Consensus 63 ~~~H~~HH~~~~~ 75 (103)
.+.||.||.+.|.
T Consensus 58 ~~~HR~HH~~sDt 70 (178)
T cd03505 58 VADHRLHHRYSDT 70 (178)
T ss_pred HHHHHHhhcccCC
Confidence 4799999998654
No 16
>PLN02601 beta-carotene hydroxylase
Probab=30.62 E-value=33 Score=25.97 Aligned_cols=42 Identities=24% Similarity=0.200 Sum_probs=25.9
Q ss_pred HHHHHHhhhccCcc---cCCCCc-------CCCchhhhhhc--CCCCCccCCch
Q 043046 41 LEAIWTTNIHDCIH---GKLWPW-------MGAGYHTIHHT--TYRHNYGHYTI 82 (103)
Q Consensus 41 ~~~~~~~~~Hsg~~---~~~~~~-------~~~~~H~~HH~--~~~~NyG~~~~ 82 (103)
+..+.-++.|+|+. +++.+. .-...|++||+ ....+||.++.
T Consensus 219 lYGiaYffVHDgLVHqRfp~~~~a~~~Y~rrl~~AHklHHa~Ke~Gv~FGfll~ 272 (303)
T PLN02601 219 VFGMAYMFVHDGLVHKRFPVGPIANVPYLRKVAAAHQLHHTDKFKGVPYGLFLG 272 (303)
T ss_pred HHHHHHHHHhhhhhccccccCCCCCCHHHHHHHHHHHhhccCCcCCccceEEec
Confidence 33344457788875 333321 22478999998 34588998754
No 17
>PLN02220 delta-9 acyl-lipid desaturase
Probab=26.33 E-value=22 Score=26.87 Aligned_cols=28 Identities=21% Similarity=0.372 Sum_probs=19.1
Q ss_pred CchhhhhhcCCC-------CCccCCchhHHhhcCC
Q 043046 63 AGYHTIHHTTYR-------HNYGHYTIWMDWMLGT 90 (103)
Q Consensus 63 ~~~H~~HH~~~~-------~NyG~~~~~WDrlfGT 90 (103)
.+.||.||++.| -+.|.++.-.=++|-+
T Consensus 111 v~~HR~HH~~sDt~~DPHsp~~Gfw~sH~gWl~~~ 145 (299)
T PLN02220 111 VSTHRFHHQFTDSDRDPHSPIEGFWFSHVLWIFDT 145 (299)
T ss_pred HHHHHHHHHhcCCCCCccccccCcHHHHhHhhcCc
Confidence 389999999764 3467765555566644
Done!