Your job contains 1 sequence.
>043051
MQSHFSQQLNSITFPKHFPSHFSRFNKHTFRTKLSSKRRSFVTIKHNRLTVSACKASSSN
SVVSSSTNSEENAESTQLFEKLKEAERQRINKLEELDRKANVQLERQLVLASEWSRVLMT
MCGRLKGTELDPENSHRIDFSDFWKLLNSNSVQYMEYSNYGQTVSVILPYYKDAKVEGKE
GNPGKDIIYRRHVVDRMPIDCWNDVWQKLHQQVVNVDVVNVNTVSAEVYSSVATAVIWSM
RLALAVGLYIWIDNIMRPIYAKLIPCDLGTPPQKTRQPLQRRALGSLGKSRAKFISAEET
TGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIA
GEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIG
GGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSK
DGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYI
GQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLACHLPDPYRPIIETDI
KSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMFGIDNMCWISSKATLDAS
RLAEFLILQTGMTAFGKAYYRNQSDLVPNLATKLEALRDEYMRFAVEKCASVLREYHSAV
ETITDILLEKGEIKAEEIWDIYKKAPQIPQPAVSPVDEYGALIYAGRWGIQGVSLPGRAT
FAPGNVGFATFGAPRPMQTLTVSDETWKLIDSIWDKRVEEIKAEASMEVEEDNQKPQLLM
ASHFL
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043051
(845 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2174819 - symbol:EMB3144 "EMBRYO DEFECTIVE 314... 3363 0. 1
UNIPROTKB|Q55700 - symbol:ftsH2 "ATP-dependent zinc metal... 778 2.7e-77 1
TAIR|locus:2157637 - symbol:VAR1 "VARIEGATED 1" species:3... 771 1.5e-76 1
TAIR|locus:2011952 - symbol:FTSH1 "FTSH protease 1" speci... 764 8.1e-76 1
TAIR|locus:2009235 - symbol:FTSH8 "FTSH protease 8" speci... 744 1.1e-73 1
TAIR|locus:2052806 - symbol:VAR2 "VARIEGATED 2" species:3... 742 1.7e-73 1
UNIPROTKB|Q9KU86 - symbol:ftsH "ATP-dependent zinc metall... 690 1.8e-73 3
TIGR_CMR|VC_0637 - symbol:VC_0637 "cell division protein ... 690 1.8e-73 3
UNIPROTKB|Q2GIT4 - symbol:ftsH "ATP-dependent zinc metall... 717 5.3e-73 2
TIGR_CMR|APH_1179 - symbol:APH_1179 "ATP-dependent metall... 717 5.3e-73 2
UNIPROTKB|Q3AFJ8 - symbol:ftsH "ATP-dependent zinc metall... 733 1.6e-72 1
TIGR_CMR|CHY_0214 - symbol:CHY_0214 "cell division protei... 733 1.6e-72 1
UNIPROTKB|P37476 - symbol:ftsH "ATP-dependent zinc metall... 721 2.9e-71 1
TIGR_CMR|SO_1197 - symbol:SO_1197 "ATP-dependent metallop... 698 3.3e-71 2
TIGR_CMR|CBU_1352 - symbol:CBU_1352 "ATP-dependent metall... 670 6.0e-71 3
UNIPROTKB|Q2GFA1 - symbol:ftsH "ATP-dependent zinc metall... 697 6.8e-71 2
TIGR_CMR|ECH_1098 - symbol:ECH_1098 "ATP-dependent metall... 697 6.8e-71 2
TIGR_CMR|NSE_0423 - symbol:NSE_0423 "ATP-dependent metall... 697 6.8e-71 2
TIGR_CMR|BA_0064 - symbol:BA_0064 "cell division protein ... 716 9.9e-71 1
UNIPROTKB|F1LN92 - symbol:Afg3l2 "Protein Afg3l2" species... 695 1.4e-70 2
UNIPROTKB|Q5LNU8 - symbol:ftsH "ATP-dependent zinc metall... 708 7.0e-70 1
TIGR_CMR|SPO_3105 - symbol:SPO_3105 "ATP-dependent metall... 708 7.0e-70 1
TIGR_CMR|DET_0391 - symbol:DET_0391 "ATP-dependent metall... 706 1.1e-69 1
UNIPROTKB|P0C5C0 - symbol:ftsH "ATP-dependent zinc metall... 704 1.8e-69 1
TIGR_CMR|GSU_1809 - symbol:GSU_1809 "cell division protei... 702 3.0e-69 1
UNIPROTKB|P0AAI3 - symbol:ftsH species:83333 "Escherichia... 680 3.3e-69 2
WB|WBGene00004978 - symbol:spg-7 species:6239 "Caenorhabd... 673 4.2e-69 2
UNIPROTKB|Q9Y4W6 - symbol:AFG3L2 "AFG3-like protein 2" sp... 699 6.3e-69 1
ASPGD|ASPL0000072959 - symbol:AN4557 species:162425 "Emer... 694 2.1e-68 1
UNIPROTKB|Q2KJI7 - symbol:AFG3L2 "AFG3-like protein 2" sp... 694 2.1e-68 1
UNIPROTKB|E2QYF3 - symbol:AFG3L2 "Uncharacterized protein... 694 2.1e-68 1
SGD|S000004695 - symbol:YTA12 "Component of the mitochond... 694 2.1e-68 1
MGI|MGI:1916847 - symbol:Afg3l2 "AFG3(ATPase family gene ... 692 3.5e-68 1
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 692 3.5e-68 1
UNIPROTKB|E1BZ74 - symbol:AFG3L2 "Uncharacterized protein... 691 4.4e-68 1
UNIPROTKB|F1N9N5 - symbol:AFG3L2 "Uncharacterized protein... 691 4.4e-68 1
CGD|CAL0004443 - symbol:orf19.2057 species:5476 "Candida ... 683 3.1e-67 1
ZFIN|ZDB-GENE-070912-46 - symbol:afg3l2 "AFG3 ATPase fami... 682 4.0e-67 1
TIGR_CMR|CPS_3452 - symbol:CPS_3452 "ATP-dependent metall... 679 8.2e-67 1
DICTYBASE|DDB_G0284249 - symbol:DDB_G0284249 "peptidase M... 654 1.8e-66 2
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 674 2.8e-66 1
UNIPROTKB|I3LLQ8 - symbol:AFG3L2 "Uncharacterized protein... 671 5.8e-66 1
DICTYBASE|DDB_G0272120 - symbol:rcaA "peptidase M41, FtsH... 650 7.7e-66 2
MGI|MGI:1928277 - symbol:Afg3l1 "AFG3(ATPase family gene ... 669 9.4e-66 1
UNIPROTKB|E1BFQ0 - symbol:E1BFQ0 "Uncharacterized protein... 666 2.0e-65 1
RGD|1309722 - symbol:Afg3l1 "AFG3(ATPase family gene 3)-l... 665 2.5e-65 1
FB|FBgn0036702 - symbol:CG6512 species:7227 "Drosophila m... 662 5.2e-65 1
TAIR|locus:2075581 - symbol:ftsh7 "FTSH protease 7" speci... 633 8.7e-65 2
TIGR_CMR|CJE_1259 - symbol:CJE_1259 "cell division protei... 659 1.1e-64 1
TAIR|locus:2025052 - symbol:ftsh10 "FTSH protease 10" spe... 621 2.9e-64 2
SGD|S000000819 - symbol:AFG3 "Component, with Yta12p, of ... 647 2.0e-63 1
TAIR|locus:2066128 - symbol:ftsh3 "FTSH protease 3" speci... 623 3.3e-63 2
TAIR|locus:2154568 - symbol:ftsh9 "FTSH protease 9" speci... 621 3.3e-63 2
GENEDB_PFALCIPARUM|PFL1925w - symbol:PFL1925w "cell divis... 642 6.9e-63 1
UNIPROTKB|Q8I526 - symbol:PFL1925w "Cell division protein... 642 6.9e-63 1
TAIR|locus:2094892 - symbol:EMB2083 "embryo defective 208... 616 1.6e-62 2
CGD|CAL0000075 - symbol:AFG3 species:5476 "Candida albica... 601 8.8e-61 2
UNIPROTKB|Q5AJC2 - symbol:AFG3 "Putative uncharacterized ... 601 8.8e-61 2
TAIR|locus:2076929 - symbol:AT3G02450 species:3702 "Arabi... 587 2.9e-60 2
TAIR|locus:2163736 - symbol:FTSH11 "FTSH protease 11" spe... 613 8.1e-60 1
ASPGD|ASPL0000029469 - symbol:AN5588 species:162425 "Emer... 601 1.5e-58 1
UNIPROTKB|F1NTK8 - symbol:YME1L1 "Uncharacterized protein... 585 7.5e-57 1
UNIPROTKB|F1P519 - symbol:YME1L1 "Uncharacterized protein... 585 7.5e-57 1
TIGR_CMR|CJE_1085 - symbol:CJE_1085 "cell division protei... 557 9.5e-57 2
RGD|620764 - symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" ... 582 1.6e-56 1
POMBASE|SPCC965.04c - symbol:SPCC965.04c "mitochondrial i... 581 2.0e-56 1
MGI|MGI:1351651 - symbol:Yme1l1 "YME1-like 1 (S. cerevisi... 580 2.5e-56 1
UNIPROTKB|G3V886 - symbol:Yme1l1 "YME1-like 1 (S. cerevis... 580 2.5e-56 1
UNIPROTKB|F1PRV6 - symbol:YME1L1 "Uncharacterized protein... 579 3.3e-56 1
UNIPROTKB|Q96TA2 - symbol:YME1L1 "ATP-dependent zinc meta... 579 3.3e-56 1
UNIPROTKB|F1RVK1 - symbol:YME1L1 "Uncharacterized protein... 579 3.3e-56 1
ZFIN|ZDB-GENE-091113-41 - symbol:yme1l1a "YME1-like 1a" s... 579 3.3e-56 1
UNIPROTKB|A6QR12 - symbol:YME1L1 "Uncharacterized protein... 574 1.1e-55 1
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 573 1.4e-55 1
DICTYBASE|DDB_G0293388 - symbol:DDB_G0293388 "ATP-depende... 571 2.3e-55 1
ZFIN|ZDB-GENE-070410-25 - symbol:yme1l1b "YME1-like 1b" s... 567 6.8e-55 1
FB|FBgn0034792 - symbol:CG3499 species:7227 "Drosophila m... 565 1.2e-54 1
UNIPROTKB|J9NRR9 - symbol:YME1L1 "Uncharacterized protein... 558 8.0e-54 1
GENEDB_PFALCIPARUM|PF14_0616 - symbol:PF14_0616 "i-AAA pr... 556 1.4e-53 1
UNIPROTKB|Q8IKI9 - symbol:PF14_0616 "ATP-dependent protea... 556 1.4e-53 1
TAIR|locus:2057386 - symbol:ftsh4 "FTSH protease 4" speci... 552 4.0e-53 1
SGD|S000006228 - symbol:YME1 "Catalytic subunit of the mi... 548 4.7e-52 1
UNIPROTKB|A7E2Z6 - symbol:SPG7 "SPG7 protein" species:991... 553 9.0e-52 1
DICTYBASE|DDB_G0267492 - symbol:DDB_G0267492 "peptidase M... 540 9.8e-52 1
UNIPROTKB|F1NXP0 - symbol:SPG7 "Uncharacterized protein" ... 551 1.1e-51 1
CGD|CAL0002950 - symbol:YME1 species:5476 "Candida albica... 539 1.3e-51 1
WB|WBGene00010842 - symbol:ymel-1 species:6239 "Caenorhab... 539 1.3e-51 1
FB|FBgn0024992 - symbol:CG2658 species:7227 "Drosophila m... 553 2.1e-51 1
TAIR|locus:2138146 - symbol:FtsHi1 "FTSH inactive proteas... 543 1.3e-50 2
UNIPROTKB|E2R4F3 - symbol:SPG7 "Uncharacterized protein" ... 544 1.9e-50 1
UNIPROTKB|Q9UQ90 - symbol:SPG7 "Paraplegin" species:9606 ... 543 2.6e-50 1
WB|WBGene00021425 - symbol:ppgn-1 species:6239 "Caenorhab... 529 5.0e-49 1
MGI|MGI:2385906 - symbol:Spg7 "spastic paraplegia 7 homol... 530 8.2e-49 1
UNIPROTKB|H9KYT1 - symbol:LOC430766 "Uncharacterized prot... 488 3.7e-48 2
SGD|S000005785 - symbol:RPT4 "ATPase of the 19S regulator... 489 7.6e-48 2
UNIPROTKB|O42586 - symbol:psmc3-b "26S protease regulator... 505 8.2e-48 1
UNIPROTKB|F1NDQ1 - symbol:PSMC3 "Uncharacterized protein"... 504 1.1e-47 1
UNIPROTKB|F1P3L9 - symbol:PSMC3 "Uncharacterized protein"... 504 1.1e-47 1
UNIPROTKB|F1PBK7 - symbol:PSMC3 "Uncharacterized protein"... 504 1.1e-47 1
UNIPROTKB|E9PM69 - symbol:PSMC3 "26S protease regulatory ... 504 1.1e-47 1
WARNING: Descriptions of 672 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 3363 (1188.9 bits), Expect = 0., P = 0.
Identities = 649/846 (76%), Positives = 734/846 (86%)
Query: 3 SHFSQQLN--SITFPKHFPSHFSRFNKHTFRT--KLSSKRRSFVTIKHNRLXXXXXXXXX 58
+HFS+ LN + FP F S F + T KLSSK F + + N L
Sbjct: 12 THFSKPLNPSNTLFPSQFRGSLSSFVRRRKPTEAKLSSKFNLFPS-RRNGLITCCSTSSF 70
Query: 59 XXXXXXXXXXXXXXXXXXQLFEKLKEAERQRINKLEELDRKANVQLERQLVLASEWSRVL 118
+LFEKL+E ER+R++ +EEL+RKANVQLERQLV+AS+WSR L
Sbjct: 71 ESTESSVSQEEDAESN--RLFEKLRETERERLSNMEELERKANVQLERQLVMASDWSRTL 128
Query: 119 MTMCGRLKGTELDPENSHRIDFSDFWKLLNSNSVQYMEYSNYGQTVSVILPYYKDAKVEG 178
+TM G+LKGTE DPE SHRI+FSDF KLL+SNSVQYMEYSNYGQT+SVILPYYKD + G
Sbjct: 129 LTMRGKLKGTEWDPETSHRINFSDFMKLLDSNSVQYMEYSNYGQTISVILPYYKDGEPLG 188
Query: 179 KEGNPGKDIIYRRHVVDRMPIDCWNDVWQKLHQQXXXXXXXXXXXXSAEVYSSVATAVIW 238
+E + K+II+RRH+VDRMPID WNDVW+KLHQQ AEVY++VAT V+W
Sbjct: 189 EEEDSKKEIIFRRHIVDRMPIDGWNDVWKKLHQQIVNVEVFNVDVVPAEVYTTVATFVVW 248
Query: 239 SMRLALAVGLYIWIDNIMRPIYAKLIPCDLGTPPQKTRQPLQRRALGSLGKSRAKFISAE 298
SMRLAL V LY+WID+I RPIYAKLIPCDLGTP +K RQPL+R+ALGSLGKSRAKFISAE
Sbjct: 249 SMRLALFVSLYVWIDSITRPIYAKLIPCDLGTPTKKIRQPLKRQALGSLGKSRAKFISAE 308
Query: 299 ETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKA 358
E TGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKA
Sbjct: 309 EKTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKA 368
Query: 359 IAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPD 418
IAGEAG+PFFAANGTDFVEMFVGVAASRVKDLFAS+RS+APSIIFIDEIDAIGSKRGGPD
Sbjct: 369 IAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFIDEIDAIGSKRGGPD 428
Query: 419 IGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLP 478
IGGGGAEREQGLLQILTEMDGFKV+TSQVLVIGATNRLDILDPALLRKGRFDKI+RVGLP
Sbjct: 429 IGGGGAEREQGLLQILTEMDGFKVTTSQVLVIGATNRLDILDPALLRKGRFDKIIRVGLP 488
Query: 479 SKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLD 538
SKDGR AILKVHARNK+FRSE+EK+ LLQE+AE TEDFTGAELQN+LNEAGILTARKDLD
Sbjct: 489 SKDGRLAILKVHARNKFFRSEDEKEELLQEVAENTEDFTGAELQNVLNEAGILTARKDLD 548
Query: 539 YIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLACHLPDPYRPIIET 598
YIG+EELLEALKRQKGTFETGQEDST++PEELKLRLAYREAAVAVLAC+LPD YRPI ET
Sbjct: 549 YIGREELLEALKRQKGTFETGQEDSTEVPEELKLRLAYREAAVAVLACYLPDQYRPISET 608
Query: 599 DIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMFGIDNMCWISSKATLD 658
DI SIRSQPNMRY+E SGRVF+RK+DY+N+I+RACAPRV+EE+MFGI+N+CWIS+K+TL+
Sbjct: 609 DINSIRSQPNMRYSETSGRVFARKSDYVNSIIRACAPRVVEEEMFGIENLCWISAKSTLE 668
Query: 659 ASRLAEFLILQTGMTAFGKAYYRNQSDLVPNLATKLEALRDEYMRFAVEKCASVLREYHS 718
AS+ AEFLILQTGMTAFGKAYYRNQ DLVPNL KLEALRDEYMRFAVEKC+S+L+EY S
Sbjct: 669 ASQRAEFLILQTGMTAFGKAYYRNQRDLVPNLVPKLEALRDEYMRFAVEKCSSILQEYQS 728
Query: 719 AVETITDILLEKGEIKAEEIWDIYKKAPQIPQPAVSPVDEYGALIYAGRWGIQGVSLPGR 778
A+E ITD+LLEKGEIKA+EIW+IY AP+IPQ V PVDEYGALIYAGRWGI GVSLPGR
Sbjct: 729 ALEEITDVLLEKGEIKADEIWNIYNTAPRIPQKPVRPVDEYGALIYAGRWGIHGVSLPGR 788
Query: 779 ATFAPGNVGFATFGAPRPMQTLTVSDETWKLIDSIWDKRVEEIKAEASMEVEEDNQKPQL 838
TF+PGN+GFATFGAPRPM+T +SD+TWKL+D IWDK+VEEIKAEA +++EE+ +KPQ+
Sbjct: 789 VTFSPGNIGFATFGAPRPMETQIISDDTWKLVDEIWDKKVEEIKAEAVIQIEEEKKKPQI 848
Query: 839 LMASHF 844
LMA+HF
Sbjct: 849 LMATHF 854
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
Identities = 194/478 (40%), Positives = 270/478 (56%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
+ GKS+A+F + TGV FDD AG + K ELQE+V LK E F G PKGVLL
Sbjct: 153 NFGKSKARF-QMDAKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAKIPKGVLLV 211
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKAIAGEAGVPFF+ +G++FVEMFVGV ASRV+DLF A+ AP +IFID
Sbjct: 212 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFID 271
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG IGGG EREQ L Q+LTEMDGF+ +T +++I ATNR D+LD AL+R
Sbjct: 272 EIDAVGRQRGA-GIGGGNDEREQTLNQLLTEMDGFEGNTG-IIIIAATNRPDVLDSALMR 329
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V V P GR IL+VHARNK E V + IA T F+GA+L N+L
Sbjct: 330 PGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPE----VSIDSIARRTPGFSGADLANLL 385
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA ILTAR+ I E+ +A+ R G E + + + K +AY E A++
Sbjct: 386 NEAAILTARRRKSAITLLEIDDAVDR----VVAGMEGTPLVDSKSKRLIAYHEVGHAIVG 441
Query: 586 CHLPDPYRPIIE-TDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMFG 644
L D + P+ + T I ++Q + + + K + I A R EE++FG
Sbjct: 442 TLLKD-HDPVQKVTLIPRGQAQGLTWFTPNEEQGLTTKAQLMARIAGAMGGRAAEEEVFG 500
Query: 645 IDNMCWISSKATLDASRLAEFLILQTGMTAFGKAYYR-------------NQSDLVPNLA 691
D + + + +A ++ + GM+ G N+S+ +A
Sbjct: 501 DDEVTTGAGGDLQQVTEMARQMVTRFGMSNLGPISLESSGGEVFLGGGLMNRSEYSEEVA 560
Query: 692 TKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAPQIP 749
T+++A + + +++E V+ + D+L+EK I EE I + ++P
Sbjct: 561 TRIDAQVRQLAEQGHQMARKIVQEQREVVDRLVDLLIEKETIDGEEFRQIVAEYAEVP 618
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 198/475 (41%), Positives = 271/475 (57%)
Query: 288 GKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGP 347
G+S++KF ET GVTF D AG + K ELQE+V LKN +++ G PKG LL GP
Sbjct: 233 GRSKSKFQEVPET-GVTFGDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 291
Query: 348 PGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEI 407
PGTGKTLLA+A+AGEAGVPFF+ ++FVE+FVGV ASRV+DLF A+S AP I+FIDEI
Sbjct: 292 PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEI 351
Query: 408 DAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKG 467
DA+G +RG +GGG EREQ + Q+LTEMDGF S V+V+ ATNR D+LD ALLR G
Sbjct: 352 DAVGRQRGA-GMGGGNDEREQTINQLLTEMDGFS-GNSGVIVLAATNRPDVLDSALLRPG 409
Query: 468 RFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNE 527
RFD+ V V P GR ILKVH+R K KDV +++A T FTGA+LQN++NE
Sbjct: 410 RFDRQVTVDRPDVAGRVQILKVHSRGKAIG----KDVDYEKVARRTPGFTGADLQNLMNE 465
Query: 528 AGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRL-AYREAAVAVLAC 586
A IL AR++L I ++E+ +AL+R G E + E K RL AY EA A++
Sbjct: 466 AAILAARRELKEISKDEISDALER----IIAGPEKKNAVVSEEKKRLVAYHEAGHALVGA 521
Query: 587 HLPDPYRPIIETDIKSIRSQPN--MRYAEISGRVFSR--KNDYL-NAIVRACAPRVIEEQ 641
+P+ Y P+ + I R Q +A R+ S YL N + A RV EE
Sbjct: 522 LMPE-YDPVAKISIIP-RGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 579
Query: 642 MFGIDNMCWISSKATLDASRLAEFLI------LQTGMTAFGKA--------YYRNQSDLV 687
+FG +N+ +S + SR+A ++ + G A G A +Q D
Sbjct: 580 IFGDENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAVGGAGGNPFLGQSMSSQKDYS 639
Query: 688 PNLATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIY 742
A ++A E + A + ++ + + +L+EK + EE ++
Sbjct: 640 MATADVVDAEVRELVEKAYVRAKEIITTQIDILHKLAQLLIEKETVDGEEFMSLF 694
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
Identities = 196/475 (41%), Positives = 271/475 (57%)
Query: 288 GKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGP 347
G+S++KF ET GV+F D AG + K ELQE+V LKN +++ G PKG LL GP
Sbjct: 245 GRSKSKFQEVPET-GVSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 303
Query: 348 PGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEI 407
PGTGKTLLA+A+AGEAGVPFF+ ++FVE+FVGV ASRV+DLF A+S AP I+FIDEI
Sbjct: 304 PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEI 363
Query: 408 DAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKG 467
DA+G +RG +GGG EREQ + Q+LTEMDGF S V+V+ ATNR D+LD ALLR G
Sbjct: 364 DAVGRQRGA-GMGGGNDEREQTINQLLTEMDGFS-GNSGVIVLAATNRPDVLDSALLRPG 421
Query: 468 RFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNE 527
RFD+ V V P GR IL+VH+R K KDV ++A T FTGA+LQN++NE
Sbjct: 422 RFDRQVTVDRPDVAGRVKILQVHSRGKALG----KDVDFDKVARRTPGFTGADLQNLMNE 477
Query: 528 AGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRL-AYREAAVAVLAC 586
A IL AR++L I ++E+ +AL+R G E + E K RL AY EA A++
Sbjct: 478 AAILAARRELKEISKDEISDALER----IIAGPEKKNAVVSEEKKRLVAYHEAGHALVGA 533
Query: 587 HLPDPYRPIIETDIKSIRSQPN--MRYAEISGRVFSR--KNDYL-NAIVRACAPRVIEEQ 641
+P+ Y P+ + I R Q +A R+ S YL N + A RV EE
Sbjct: 534 LMPE-YDPVAKISIIP-RGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV 591
Query: 642 MFGIDNMCWISSKATLDASRLAEFLI------LQTGMTAFGKA--------YYRNQSDLV 687
+FG +N+ +S + SR+A +I + G A G +Q D
Sbjct: 592 IFGDENVTTGASNDFMQVSRVARQMIERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKDYS 651
Query: 688 PNLATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIY 742
A ++A E + A ++ ++ + + + +L+EK + EE ++
Sbjct: 652 MATADIVDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEFMSLF 706
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 196/478 (41%), Positives = 262/478 (54%)
Query: 287 LGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHG 346
+G+S+AKF E TGVTFDD AG + K++ E+V LK E F G PKGVLL G
Sbjct: 202 IGQSKAKF-QMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVG 260
Query: 347 PPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDE 406
PPGTGKTLLAKAIAGEAGVPFF+ +G++FVEMFVGV ASRV+DLF A+ AP I+F+DE
Sbjct: 261 PPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDE 320
Query: 407 IDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRK 466
IDA+G +RG IGGG EREQ L Q+LTEMDGF+ +T V+V+ ATNR DILD ALLR
Sbjct: 321 IDAVGRQRG-TGIGGGNDEREQTLNQLLTEMDGFEGNTG-VIVVAATNRADILDSALLRP 378
Query: 467 GRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILN 526
GRFD+ V V +P GR ILKVH+ NK F E V L+ IA T F+GA+L N+LN
Sbjct: 379 GRFDRQVSVDVPDVKGRTDILKVHSGNKKF----ESGVSLEVIAMRTPGFSGADLANLLN 434
Query: 527 EAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLAC 586
EA IL R+ I +E+ +++ R G E + + K +AY E A+ C
Sbjct: 435 EAAILAGRRGKTAISSKEIDDSIDR----IVAGMEGTVMTDGKSKSLVAYHEVGHAI--C 488
Query: 587 HLPDPYRPIIETDIKSIRSQPN--MRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMFG 644
P ++ R Q + K IV R EE +FG
Sbjct: 489 GTLTPGHDAVQKVTLIPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFG 548
Query: 645 IDNMCWISSKATLDASRLAEFLILQTGMTAFGKAYYRN---QSDLVP------NLATKLE 695
+ + + LA+ ++ GM+ G + QSD++ +++ KL
Sbjct: 549 ESEVTTGAVSDLQQITGLAKQMVTTFGMSEIGPWSLMDSSEQSDVIMRMMARNSMSEKLA 608
Query: 696 ALRDEYMRF----AVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAPQIP 749
D ++ A E S +R A++ I +ILLEK + +E I + +IP
Sbjct: 609 NDIDTAVKTLSDKAYEIALSQIRNNREAMDKIVEILLEKETMSGDEFRAILSEFTEIP 666
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 197/478 (41%), Positives = 261/478 (54%)
Query: 288 GKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGP 347
G+S+AKF E TGVTFDD AG + K++ E+V LK E F G PKGVLL GP
Sbjct: 210 GQSKAKF-QMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGAKIPKGVLLIGP 268
Query: 348 PGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEI 407
PGTGKTLLAKAIAGEAGVPFF+ +G++FVEMFVGV ASRV+DLF A+ AP I+F+DEI
Sbjct: 269 PGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEI 328
Query: 408 DAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKG 467
DA+G +RG IGGG EREQ L Q+LTEMDGF+ +T V+V+ ATNR DILD ALLR G
Sbjct: 329 DAVGRQRG-TGIGGGNDEREQTLNQLLTEMDGFEGNTG-VIVVAATNRADILDSALLRPG 386
Query: 468 RFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNE 527
RFD+ V V +P GR ILKVHA NK F + DV L+ IA T F+GA+L N+LNE
Sbjct: 387 RFDRQVSVDVPDVKGRTDILKVHAGNKKF----DNDVSLEIIAMRTPGFSGADLANLLNE 442
Query: 528 AGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLACH 587
A IL R+ I +E+ +++ R G E + + K +AY E AV C
Sbjct: 443 AAILAGRRARTSISSKEIDDSIDR----IVAGMEGTVMTDGKSKSLVAYHEVGHAV--CG 496
Query: 588 LPDPYRPIIETDIKSIRSQPN--MRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMFGI 645
P ++ R Q + K IV R EE +FG
Sbjct: 497 TLTPGHDAVQKVTLIPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEIIFG- 555
Query: 646 DNMCWISSKATLDA-SRLAEFLILQTGMTAFGKAYYRN---QSDLV----------PNLA 691
D+ + L + LA ++ GM+ G + QSD++ LA
Sbjct: 556 DSEVTTGAVGDLQQITGLARQMVTTFGMSDIGPWSLMDSSAQSDVIMRMMARNSMSEKLA 615
Query: 692 TKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAPQIP 749
+++ + A E S ++ A++ + ++LLEK I +E I + +IP
Sbjct: 616 EDIDSAVKKLSDSAYEIALSHIKNNREAMDKLVEVLLEKETIGGDEFRAILSEFTEIP 673
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 690 (248.0 bits), Expect = 1.8e-73, Sum P(3) = 1.8e-73
Identities = 186/483 (38%), Positives = 270/483 (55%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S GKS+A+ +S E+ TF D AG + K +++E+V L++ FQ G P GVL+
Sbjct: 137 SFGKSKARMMS-EDQIKTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMV 195
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKAIAGEA VPFF +G+DFVEMFVGV ASRV+D+F A+ +P IIFID
Sbjct: 196 GPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFID 255
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG +GGG EREQ L Q+L EMDGF+ ++VI ATNR D+LDPALLR
Sbjct: 256 EIDAVGRQRGA-GVGGGHDEREQTLNQMLVEMDGFE-GNEGIIVIAATNRPDVLDPALLR 313
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V VGLP GR ILKVH R ++ E + IA T F+GA+L N++
Sbjct: 314 PGRFDRQVVVGLPDVRGREQILKVHMRKVPLANDVEPSL----IARGTPGFSGADLANLV 369
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA + AR + + E L + K + S + EE+K AY EA AV+
Sbjct: 370 NEAALFAARGNKRNVSMVEF--ELAKDK-IMMGAERRSMVMSEEIKESTAYHEAGHAVVG 426
Query: 586 CHLPDPYRPIIETDI-KSIRSQPNMRYAEISGRVFSRKNDYLNAIVRAC-APRVIEEQMF 643
+P+ + P+ + I R+ Y RV S +L +++ + R+ EE ++
Sbjct: 427 RLVPE-HDPVYKVSIIPRGRALGVTMYLPEQDRV-SMSKQHLESMISSLYGGRLAEELIY 484
Query: 644 GIDNMCWISSKATLDASRLAEFLILQTGMTA-FGKAYY-RNQSDL-VPNLATKLEALRDE 700
G + + +S A+ +A ++ Q G + G Y ++ ++ + T+ + + D+
Sbjct: 485 GKEKVSTGASNDIERATEIARKMVTQWGFSEKLGPMLYAEDEGEVFLGRSVTQTKHMSDD 544
Query: 701 YMRFAVEKCASVL-REYHSAVETITDIL---------LEKGE-IKAEEIWDIYKKAPQIP 749
+ ++ ++ R Y A + I D + L K E I A +I D+ + P I
Sbjct: 545 TAKLIDDEVRQIIDRNYERARQIIMDNMDIMHAMKDALMKYETIDAGQIDDLMARKPVIR 604
Query: 750 QPA 752
+PA
Sbjct: 605 EPA 607
Score = 42 (19.8 bits), Expect = 1.8e-73, Sum P(3) = 1.8e-73
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 723 ITDILLEKGEIKAEEIWDIYKKAPQIPQPAVSP 755
I D++ K I+ W K P P+ P
Sbjct: 593 IDDLMARKPVIREPAGWGEQSKTPSAPEVKAEP 625
Score = 41 (19.5 bits), Expect = 1.8e-73, Sum P(3) = 1.8e-73
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 133 ENSHR-IDFSDFWKLLNSNSVQYMEYSN 159
EN+ R +D++ F K + +Q +++N
Sbjct: 29 ENNGRAVDYTTFVKEVGQGQIQEAQFNN 56
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 690 (248.0 bits), Expect = 1.8e-73, Sum P(3) = 1.8e-73
Identities = 186/483 (38%), Positives = 270/483 (55%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S GKS+A+ +S E+ TF D AG + K +++E+V L++ FQ G P GVL+
Sbjct: 137 SFGKSKARMMS-EDQIKTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMV 195
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKAIAGEA VPFF +G+DFVEMFVGV ASRV+D+F A+ +P IIFID
Sbjct: 196 GPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFID 255
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG +GGG EREQ L Q+L EMDGF+ ++VI ATNR D+LDPALLR
Sbjct: 256 EIDAVGRQRGA-GVGGGHDEREQTLNQMLVEMDGFE-GNEGIIVIAATNRPDVLDPALLR 313
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V VGLP GR ILKVH R ++ E + IA T F+GA+L N++
Sbjct: 314 PGRFDRQVVVGLPDVRGREQILKVHMRKVPLANDVEPSL----IARGTPGFSGADLANLV 369
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA + AR + + E L + K + S + EE+K AY EA AV+
Sbjct: 370 NEAALFAARGNKRNVSMVEF--ELAKDK-IMMGAERRSMVMSEEIKESTAYHEAGHAVVG 426
Query: 586 CHLPDPYRPIIETDI-KSIRSQPNMRYAEISGRVFSRKNDYLNAIVRAC-APRVIEEQMF 643
+P+ + P+ + I R+ Y RV S +L +++ + R+ EE ++
Sbjct: 427 RLVPE-HDPVYKVSIIPRGRALGVTMYLPEQDRV-SMSKQHLESMISSLYGGRLAEELIY 484
Query: 644 GIDNMCWISSKATLDASRLAEFLILQTGMTA-FGKAYY-RNQSDL-VPNLATKLEALRDE 700
G + + +S A+ +A ++ Q G + G Y ++ ++ + T+ + + D+
Sbjct: 485 GKEKVSTGASNDIERATEIARKMVTQWGFSEKLGPMLYAEDEGEVFLGRSVTQTKHMSDD 544
Query: 701 YMRFAVEKCASVL-REYHSAVETITDIL---------LEKGE-IKAEEIWDIYKKAPQIP 749
+ ++ ++ R Y A + I D + L K E I A +I D+ + P I
Sbjct: 545 TAKLIDDEVRQIIDRNYERARQIIMDNMDIMHAMKDALMKYETIDAGQIDDLMARKPVIR 604
Query: 750 QPA 752
+PA
Sbjct: 605 EPA 607
Score = 42 (19.8 bits), Expect = 1.8e-73, Sum P(3) = 1.8e-73
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 723 ITDILLEKGEIKAEEIWDIYKKAPQIPQPAVSP 755
I D++ K I+ W K P P+ P
Sbjct: 593 IDDLMARKPVIREPAGWGEQSKTPSAPEVKAEP 625
Score = 41 (19.5 bits), Expect = 1.8e-73, Sum P(3) = 1.8e-73
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 133 ENSHR-IDFSDFWKLLNSNSVQYMEYSN 159
EN+ R +D++ F K + +Q +++N
Sbjct: 29 ENNGRAVDYTTFVKEVGQGQIQEAQFNN 56
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 717 (257.5 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 195/468 (41%), Positives = 270/468 (57%)
Query: 282 RALGSLGKSRAKFISAEETTG-VTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPK 340
R +G KSRA+ ++ ++ G VTFDD AG E K EL EIV LK+ ++F G PK
Sbjct: 136 RTMG-FSKSRARLMT--DSRGKVTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIPK 192
Query: 341 GVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPS 400
G LL G PGTGKTLLA+AIAGEA VPFF+ +G+DFVEMFVGV ASRV+D+F + AP
Sbjct: 193 GCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPC 252
Query: 401 IIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILD 460
IIF+DEIDA+G RG +GGG EREQ L Q+L EMDGF+ S V++I ATNR D+LD
Sbjct: 253 IIFVDEIDAVGRHRG-IGLGGGNDEREQTLNQLLVEMDGFE-SNEGVVIIAATNRPDVLD 310
Query: 461 PALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAE 520
PALLR GRFD+ V + +P +GR I+ VHA+ + DV L+ IA T F+GA+
Sbjct: 311 PALLRPGRFDRQVTISIPDINGREKIIAVHAK----KVPLAPDVDLRVIARGTPGFSGAD 366
Query: 521 LQNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRL-AYREA 579
L N++NEA ++ AR D + + A R K G E + + E + RL AY EA
Sbjct: 367 LANLVNEAALIAARLDKKIVTMCDFEYA--RDKVMM--GAERKSMVMREEERRLTAYHEA 422
Query: 580 AVAVLACHLP--DPYRPIIETDIKSIRSQPN-MRYAEISGRVFSRKNDYLNAIVRACAPR 636
AV+A H P DP T I RS MR E + RV + L + A R
Sbjct: 423 GHAVVAFHNPASDPIHKA--TIIPRGRSLGLVMRLPE-TDRVSHTREKMLADLTVAMGGR 479
Query: 637 VIEEQMFGIDNMCWISSKATLDASRLAEFLILQTGMT-AFGKAYYRNQSD--LVPNLATK 693
EE +FG + + +S A+ LA+ ++++ GM+ + G Y+ +++ + NLA
Sbjct: 480 AAEELIFGYNKVTSGASSDIKQATDLAKSMVMKWGMSDSVGPLYHSDEAHERISTNLANL 539
Query: 694 LEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDI 741
++ + A+ + VL ++ A+ I LLE + ++I DI
Sbjct: 540 IDDEVKSIVSTALAEAKDVLTKHSDALHAIAANLLEFETLTGDDIADI 587
Score = 39 (18.8 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 236 VIWSMRLALAVGLY 249
++WS +ALA LY
Sbjct: 11 IVWSAVIALAAMLY 24
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 717 (257.5 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 195/468 (41%), Positives = 270/468 (57%)
Query: 282 RALGSLGKSRAKFISAEETTG-VTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPK 340
R +G KSRA+ ++ ++ G VTFDD AG E K EL EIV LK+ ++F G PK
Sbjct: 136 RTMG-FSKSRARLMT--DSRGKVTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIPK 192
Query: 341 GVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPS 400
G LL G PGTGKTLLA+AIAGEA VPFF+ +G+DFVEMFVGV ASRV+D+F + AP
Sbjct: 193 GCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPC 252
Query: 401 IIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILD 460
IIF+DEIDA+G RG +GGG EREQ L Q+L EMDGF+ S V++I ATNR D+LD
Sbjct: 253 IIFVDEIDAVGRHRG-IGLGGGNDEREQTLNQLLVEMDGFE-SNEGVVIIAATNRPDVLD 310
Query: 461 PALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAE 520
PALLR GRFD+ V + +P +GR I+ VHA+ + DV L+ IA T F+GA+
Sbjct: 311 PALLRPGRFDRQVTISIPDINGREKIIAVHAK----KVPLAPDVDLRVIARGTPGFSGAD 366
Query: 521 LQNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRL-AYREA 579
L N++NEA ++ AR D + + A R K G E + + E + RL AY EA
Sbjct: 367 LANLVNEAALIAARLDKKIVTMCDFEYA--RDKVMM--GAERKSMVMREEERRLTAYHEA 422
Query: 580 AVAVLACHLP--DPYRPIIETDIKSIRSQPN-MRYAEISGRVFSRKNDYLNAIVRACAPR 636
AV+A H P DP T I RS MR E + RV + L + A R
Sbjct: 423 GHAVVAFHNPASDPIHKA--TIIPRGRSLGLVMRLPE-TDRVSHTREKMLADLTVAMGGR 479
Query: 637 VIEEQMFGIDNMCWISSKATLDASRLAEFLILQTGMT-AFGKAYYRNQSD--LVPNLATK 693
EE +FG + + +S A+ LA+ ++++ GM+ + G Y+ +++ + NLA
Sbjct: 480 AAEELIFGYNKVTSGASSDIKQATDLAKSMVMKWGMSDSVGPLYHSDEAHERISTNLANL 539
Query: 694 LEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDI 741
++ + A+ + VL ++ A+ I LLE + ++I DI
Sbjct: 540 IDDEVKSIVSTALAEAKDVLTKHSDALHAIAANLLEFETLTGDDIADI 587
Score = 39 (18.8 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 236 VIWSMRLALAVGLY 249
++WS +ALA LY
Sbjct: 11 IVWSAVIALAAMLY 24
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 202/497 (40%), Positives = 279/497 (56%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S GKSRAK + +E VTF D AG + +K EL EIV LKN ++ G PKGVLL
Sbjct: 139 SFGKSRAK-LHTDEKKRVTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVLLF 197
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
G PGTGKTLLA+AIAGEAGVPFF+ +G+DFVEMFVGV ASRV+DLF A+ AP I+FID
Sbjct: 198 GQPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFID 257
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG +GGG EREQ L Q+L EMDGF S +++I ATNR DILDPALLR
Sbjct: 258 EIDAVGRQRGA-GLGGGHDEREQTLNQLLVEMDGFN-SNEGIIIIAATNRPDILDPALLR 315
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ + V P +GR ILKVH + K + + DVL A T FTGA+L N++
Sbjct: 316 PGRFDRHIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVL----ARRTPGFTGADLANMV 371
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRL-AYREAAVAVL 584
NEA +L AR++ I EE+ EA++R G E + + E + RL AY EA A++
Sbjct: 372 NEAALLAARRNKKVINMEEMEEAIER----VIAGPEKKSKVISEREKRLVAYHEAGHAMV 427
Query: 585 ACHLP--DPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQM 642
LP DP I + I R+ R + K+ L+ I RV E +
Sbjct: 428 GYLLPHTDPVHKI--SIIPRGRAGGYTLLLPEEDRSYMTKSQLLDEITMLLGGRVAEALV 485
Query: 643 FGIDNMCWISSKATLDASRLAEF---LILQTGMT------AFGK---AYYRNQSDLVP-- 688
+++ IS+ A D R E ++++ GM+ FGK A + + DL
Sbjct: 486 --LED---ISTGARNDLERATETARRMVMEYGMSEELGPLTFGKGTEAVFLGR-DLARDR 539
Query: 689 NLATKLEALRDEYMRFAVEKCAS----VLREYHSAVETITDILLEKGEIKAEEIWDIYKK 744
N + ++ D+ +R ++ C S +L++ + + + L+E ++ EE + K+
Sbjct: 540 NYSEEIAYTIDKEVRKIIDSCYSRAEEILKKNINVLHLVATKLMEVETMEGEEFEKLMKE 599
Query: 745 ----APQIPQPAVSPVD 757
P++ SP D
Sbjct: 600 NGLTKPRVNGNNDSPAD 616
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 202/497 (40%), Positives = 279/497 (56%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S GKSRAK + +E VTF D AG + +K EL EIV LKN ++ G PKGVLL
Sbjct: 139 SFGKSRAK-LHTDEKKRVTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVLLF 197
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
G PGTGKTLLA+AIAGEAGVPFF+ +G+DFVEMFVGV ASRV+DLF A+ AP I+FID
Sbjct: 198 GQPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFID 257
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG +GGG EREQ L Q+L EMDGF S +++I ATNR DILDPALLR
Sbjct: 258 EIDAVGRQRGA-GLGGGHDEREQTLNQLLVEMDGFN-SNEGIIIIAATNRPDILDPALLR 315
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ + V P +GR ILKVH + K + + DVL A T FTGA+L N++
Sbjct: 316 PGRFDRHIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVL----ARRTPGFTGADLANMV 371
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRL-AYREAAVAVL 584
NEA +L AR++ I EE+ EA++R G E + + E + RL AY EA A++
Sbjct: 372 NEAALLAARRNKKVINMEEMEEAIER----VIAGPEKKSKVISEREKRLVAYHEAGHAMV 427
Query: 585 ACHLP--DPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQM 642
LP DP I + I R+ R + K+ L+ I RV E +
Sbjct: 428 GYLLPHTDPVHKI--SIIPRGRAGGYTLLLPEEDRSYMTKSQLLDEITMLLGGRVAEALV 485
Query: 643 FGIDNMCWISSKATLDASRLAEF---LILQTGMT------AFGK---AYYRNQSDLVP-- 688
+++ IS+ A D R E ++++ GM+ FGK A + + DL
Sbjct: 486 --LED---ISTGARNDLERATETARRMVMEYGMSEELGPLTFGKGTEAVFLGR-DLARDR 539
Query: 689 NLATKLEALRDEYMRFAVEKCAS----VLREYHSAVETITDILLEKGEIKAEEIWDIYKK 744
N + ++ D+ +R ++ C S +L++ + + + L+E ++ EE + K+
Sbjct: 540 NYSEEIAYTIDKEVRKIIDSCYSRAEEILKKNINVLHLVATKLMEVETMEGEEFEKLMKE 599
Query: 745 ----APQIPQPAVSPVD 757
P++ SP D
Sbjct: 600 NGLTKPRVNGNNDSPAD 616
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 193/469 (41%), Positives = 266/469 (56%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
+ GKS+AK + EE V F D AG + K+EL E+V LK+ +F G PKGVLL
Sbjct: 142 NFGKSKAKLYT-EEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELGARIPKGVLLV 200
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKA AGEAGVPFF+ +G+DFVEMFVGV ASRV+DLF +A+ AP +IFID
Sbjct: 201 GPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFID 260
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG +GGG EREQ L Q+L EMDGF + +++I ATNR DILDPALLR
Sbjct: 261 EIDAVGRQRGA-GLGGGHDEREQTLNQLLVEMDGFSANEG-IIIIAATNRADILDPALLR 318
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ + V P GR A+LKVHARNK ++ V L+ IA T F+GA+L+N+L
Sbjct: 319 PGRFDRQITVDRPDVIGREAVLKVHARNKPL----DETVNLKSIAMRTPGFSGADLENLL 374
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA ++ AR++ I ++ EA R + S I ++ + +AY E V+
Sbjct: 375 NEAALVAARQNKKKIDARDIDEATDR---VIAGPAKKSRVISKKERNIVAYHEGGHTVIG 431
Query: 586 CHLPDPYRPIIETDIKSIRSQPNMRYAEI---SGRVFSRKNDYLNAIVRACAPRVIEEQM 642
L D + + I R Q YA + R F K + L+ IV RV EE +
Sbjct: 432 LVL-DEADMVHKVTIVP-RGQAG-GYAVMLPREDRYFQTKPELLDKIVGLLGGRVAEEII 488
Query: 643 FG-IDNMCWIS-SKATLDASRLA-EFLI------LQTGMTAFGKAY----YRNQSDLVPN 689
FG + +AT A R+ EF + LQ G + G+ + + N+ +
Sbjct: 489 FGEVSTGAHNDFQRATNIARRMVTEFGMSEKLGPLQFGQSQGGQVFLGRDFNNEQNYSDQ 548
Query: 690 LATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEI 738
+A +++ ++ E+ +L E +E I LL+ + AE+I
Sbjct: 549 IAYEIDQEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLDAEQI 597
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 698 (250.8 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
Identities = 191/492 (38%), Positives = 276/492 (56%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S GKS+AK +S E+ TF D AG + K E++E+V L++ +FQ G P GVL+
Sbjct: 138 SFGKSKAKLMS-EDQIKTTFADVAGCDEAKEEVKELVDYLRDPTKFQKLGGRIPTGVLMV 196
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKAIAGE+ VPFF +G+DFVEMFVGV ASRV+D+F A+ AP IIFID
Sbjct: 197 GPPGTGKTLLAKAIAGESKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFID 256
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG +GGG EREQ L Q+L EMDGF+ ++VI ATNR D+LD ALLR
Sbjct: 257 EIDAVGRQRGA-GLGGGHDEREQTLNQMLVEMDGFE-GNEGIIVIAATNRPDVLDSALLR 314
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V VGLP GR ILKVH R K SE DV IA T F+GA+L N++
Sbjct: 315 PGRFDRQVVVGLPDVRGREQILKVHMR-KVPLSE---DVKASVIARGTPGFSGADLANLV 370
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRL-AYREAAVAVL 584
NEA + AR + +G EE +R K G E + + E + + AY EA A++
Sbjct: 371 NEAALFAARGNRRVVGMEEF----ERAKDKIMMGAERRSMVMSEAEKEMTAYHEAGHAIV 426
Query: 585 ACHLPDPYRPIIE-TDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMF 643
C +P+ + P+ + T I R+ + + + + + I A R+ EE ++
Sbjct: 427 GCLVPE-HDPVHKVTIIPRGRALGVTFFLPEADAISQSRRKLESQISVAYGGRLAEELIY 485
Query: 644 GIDNMCWISSKATLDASRLAEFLILQTGMT-AFGKAYYRNQSDLV--PNLATKLEALRDE 700
G + + +S+ A+ +A ++ Q G + G Y + V K +A+ DE
Sbjct: 486 GTEKVSTGASQDIKYATSIARNMVTQWGFSDKLGPLLYAEEEGEVFLGRSMGKAKAMSDE 545
Query: 701 Y-------MRFAVEKCAS----VLREYHSAVETITDILLEKGEIKAEEIWDIYKKAPQIP 749
++ ++K S +L++ + ++ D L++ I + +I D+ + ++
Sbjct: 546 TATLIDTEVKAFIDKNYSRAKQILQDNVDILHSMKDALMKYETIDSLQIDDLMNRR-EVR 604
Query: 750 QPAVSPVDEYGA 761
QPA DE G+
Sbjct: 605 QPADWQADENGS 616
Score = 41 (19.5 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
Identities = 11/61 (18%), Positives = 27/61 (44%)
Query: 104 LERQLVLASEWSRVLMTMCGRLKGTELDPENSHRIDFSDFWKLLNSNSVQYMEYSNYGQT 163
+ + L+L W + + + +G +S ++D+S F + V +E + +T
Sbjct: 4 MAKNLIL---WVVIAVVLMSVFQGYSPSSSSSQKMDYSTFLDNVRDGQVATVEVKSDQRT 60
Query: 164 V 164
+
Sbjct: 61 I 61
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 670 (240.9 bits), Expect = 6.0e-71, Sum P(3) = 6.0e-71
Identities = 170/401 (42%), Positives = 234/401 (58%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S G+S+A+ +S ++ VTFDD AG + K E++E+V L++ +FQ G P GVLL
Sbjct: 137 SFGRSKARLLSQDQVK-VTFDDVAGVDEAKEEVKELVEFLRDPGKFQRLGGKMPCGVLLV 195
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKA+AGEA VPFF +G+DFVEMFVGV ASRV+D+F A+ AP IIFID
Sbjct: 196 GPPGTGKTLLAKAVAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFID 255
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G RG +GGG EREQ L Q+L EMDGF+ ++V+ ATNR D+LDPALLR
Sbjct: 256 EIDAVGRHRGA-GLGGGHDEREQTLNQLLVEMDGFE-GKEGIIVMAATNRPDVLDPALLR 313
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V V LP GR ILKVH NK + KDV IA T F+GA+L NI+
Sbjct: 314 PGRFDRQVVVPLPDIKGREYILKVHM-NKLPLA---KDVKASVIARGTPGFSGADLANIV 369
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRL-AYREAAVAVL 584
NEA + AR++ + E +R K G E + + + + +L AY EA A++
Sbjct: 370 NEAALFAARENKKDVSMSEF----ERAKDKIMMGAERRSMVMSDDEKKLTAYHEAGHAIV 425
Query: 585 ACHLPDPYRPIIE-TDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMF 643
H+ + + P+ + T I R+ + R K + R+ EE +F
Sbjct: 426 GLHMLE-HDPVYKVTIIPRGRALGVTMFLPEHDRYSMTKRRLECQLAGLFGGRIAEEIIF 484
Query: 644 GIDNMCWISSKATLDASRLAEFLILQTGMTA-FGKAYYRNQ 683
G D + +S A+ +A ++ + G++ G YR +
Sbjct: 485 GPDLVTTGASNDIEKATEIARNMVTKWGLSQKLGPLTYREE 525
Score = 41 (19.5 bits), Expect = 6.0e-71, Sum P(3) = 6.0e-71
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 157 YSNYGQTVSVILPYYKDAKVEGKEGNPGKDIIYRRHVV 194
+SN+G S + PY V+ + ++ + H +
Sbjct: 22 FSNFGSRQSDVQPYSYSQFVQAVNNDKVSSVVIQGHEI 59
Score = 38 (18.4 bits), Expect = 6.0e-71, Sum P(3) = 6.0e-71
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 798 QTLTVSDETWKLIDSIWDKRVEEIKAEASMEVEEDNQKPQLL 839
Q +SD T K IDS + V+ A +EE ++ L+
Sbjct: 537 QRKDISDATNKEIDSEVRRIVDTAYTTAKQTLEEHIEQLHLM 578
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 697 (250.4 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 186/461 (40%), Positives = 263/461 (57%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
+ KSRAK ++ E VTF+D AG + K EL EIV LK+ + FQ G PKG LL
Sbjct: 137 NFSKSRAKLMT-ENRNKVTFNDVAGIDEAKEELIEIVDFLKHRQRFQKLGGKIPKGCLLI 195
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
G PGTGKTLLA+AIAGEA VPFF+ +G+DFVEMFVGV ASRV+D+F + AP IIFID
Sbjct: 196 GSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFID 255
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G RG +GGG EREQ L Q+L EMDGF+ S V++I ATNR D+LD ALLR
Sbjct: 256 EIDAVGRHRG-IGLGGGNDEREQTLNQLLVEMDGFE-SNEGVIIIAATNRPDVLDSALLR 313
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V + +P +GR I+ VH + + DV ++ IA T F+GA+L N++
Sbjct: 314 PGRFDRQVTISIPDINGREKIINVHIK----KVPTAPDVNIRTIARGTPGFSGADLANLV 369
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA ++ AR + + + A R K + S + EE + AY EA A++A
Sbjct: 370 NEAALIAARLNKKIVTMSDFEYA--RDK-VMMGAERKSLMMTEEERRLTAYHEAGHAIIA 426
Query: 586 CHLPDPYRPIIE-TDIKSIRSQPN-MRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMF 643
+ PI + T I RS MR E S RV + + + A R EE +F
Sbjct: 427 -FFTEASDPIHKATIIPRGRSLGLVMRLPE-SDRVSHTREKMIADLTVAMGGRAAEELIF 484
Query: 644 GIDNMCWISSKATLDASRLAEFLILQTGMT-AFGKAYYRN-QSDLVPN-LATKLEALRDE 700
G + +S A+ LA+ ++++ GM+ G Y+ + ++D + N LA ++
Sbjct: 485 GYHKVTSGASSDIKQATDLAKAMVMKWGMSDKVGPLYHNDDKNDTISNNLANLIDEEVKL 544
Query: 701 YMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDI 741
+ A+E+ S+L E+ ++ + LLE + E+I +I
Sbjct: 545 IVTSALERAKSLLNEHLESLHIVAKNLLEFETLTGEDIKNI 585
Score = 39 (18.8 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 134 NSHRIDFSDFWKLLNSNSVQYMEYSNYGQT 163
N+ ++ FS+F +++N V+ + + T
Sbjct: 33 NTIKLPFSEFLNKIDNNEVESINIGEHNIT 62
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 697 (250.4 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 186/461 (40%), Positives = 263/461 (57%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
+ KSRAK ++ E VTF+D AG + K EL EIV LK+ + FQ G PKG LL
Sbjct: 137 NFSKSRAKLMT-ENRNKVTFNDVAGIDEAKEELIEIVDFLKHRQRFQKLGGKIPKGCLLI 195
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
G PGTGKTLLA+AIAGEA VPFF+ +G+DFVEMFVGV ASRV+D+F + AP IIFID
Sbjct: 196 GSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFID 255
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G RG +GGG EREQ L Q+L EMDGF+ S V++I ATNR D+LD ALLR
Sbjct: 256 EIDAVGRHRG-IGLGGGNDEREQTLNQLLVEMDGFE-SNEGVIIIAATNRPDVLDSALLR 313
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V + +P +GR I+ VH + + DV ++ IA T F+GA+L N++
Sbjct: 314 PGRFDRQVTISIPDINGREKIINVHIK----KVPTAPDVNIRTIARGTPGFSGADLANLV 369
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA ++ AR + + + A R K + S + EE + AY EA A++A
Sbjct: 370 NEAALIAARLNKKIVTMSDFEYA--RDK-VMMGAERKSLMMTEEERRLTAYHEAGHAIIA 426
Query: 586 CHLPDPYRPIIE-TDIKSIRSQPN-MRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMF 643
+ PI + T I RS MR E S RV + + + A R EE +F
Sbjct: 427 -FFTEASDPIHKATIIPRGRSLGLVMRLPE-SDRVSHTREKMIADLTVAMGGRAAEELIF 484
Query: 644 GIDNMCWISSKATLDASRLAEFLILQTGMT-AFGKAYYRN-QSDLVPN-LATKLEALRDE 700
G + +S A+ LA+ ++++ GM+ G Y+ + ++D + N LA ++
Sbjct: 485 GYHKVTSGASSDIKQATDLAKAMVMKWGMSDKVGPLYHNDDKNDTISNNLANLIDEEVKL 544
Query: 701 YMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDI 741
+ A+E+ S+L E+ ++ + LLE + E+I +I
Sbjct: 545 IVTSALERAKSLLNEHLESLHIVAKNLLEFETLTGEDIKNI 585
Score = 39 (18.8 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 134 NSHRIDFSDFWKLLNSNSVQYMEYSNYGQT 163
N+ ++ FS+F +++N V+ + + T
Sbjct: 33 NTIKLPFSEFLNKIDNNEVESINIGEHNIT 62
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 697 (250.4 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 191/478 (39%), Positives = 270/478 (56%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
+ GKS+A+ +S + + VTF D AG + K EL EIV L+ ++FQ G PKG LL
Sbjct: 138 TFGKSKARLLS-DRSNKVTFHDVAGIDEAKEELAEIVEFLREPKKFQKLGGKIPKGCLLI 196
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKAIAGEA VPFF+ +G+DFVEMFVGV ASRV+D+F + AP +IFID
Sbjct: 197 GPPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFID 256
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G RG GGG EREQ L Q+L EMDGF+ + V++I ATNR D+LDPALLR
Sbjct: 257 EIDAVGRHRG-VGFGGGNDEREQTLNQLLVEMDGFEANEG-VIIIAATNRPDVLDPALLR 314
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ + + +P GR IL+VH + + +V + IA T F+GA+L N++
Sbjct: 315 PGRFDRQITISIPDIAGRQKILEVHLK----KIPTAPNVEVSIIARGTPGFSGADLANLV 370
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQE-DSTDIPEELKLRLAYREAAVAVL 584
NE+ ++ AR++ + E+ A R K G E S + EE KL AY EA A+
Sbjct: 371 NESALIAARRNKKVVTNEDFEYA--RDK--ILMGMERKSLVMREEEKLLTAYHEAGHAIT 426
Query: 585 ACHLPDPYRPIIE-TDIKSIRSQPN-MRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQM 642
+ L + PI + T I R+ MR E F+R + + IV A R E+ +
Sbjct: 427 SLKL-EASDPIHKATIIPRGRALGLVMRLPEHDRVSFTRAKMHADLIV-AMGGRAAEQVI 484
Query: 643 FGIDNMCWISSKATLDASRLAEFLILQTGMTA-FGKAYYRNQSDLVPN---LATKLEALR 698
FG D ++ A+ LA ++ + GM+ G Y Q+D PN L+ ++ L
Sbjct: 485 FGDDKTTSGAASDIKQATHLARSMVTKWGMSEKVGPLLYGEQND--PNNHILSIEMSNLI 542
Query: 699 DEYMRF----AVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIY------KKAP 746
D ++ A+++ +L E ++ + LLE + +E+ D+ KKAP
Sbjct: 543 DSEVKQLVTDALKEATKILNENIESLHRVAKALLEYETLTGQELSDLLEGKSFLKKAP 600
Score = 39 (18.8 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 135 SHRIDFSDFWKLLNSNSVQYMEYSNY 160
+ +I FS+F L+ VQ + Y
Sbjct: 35 NEKIQFSEFLDLVEKGEVQKIVIEGY 60
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
Identities = 192/482 (39%), Positives = 274/482 (56%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
+ GKS+AK + +E V F D AG + K+EL E+V LK+ +F G PKGVLL
Sbjct: 143 NFGKSKAKLYN-DEKKKVRFRDVAGADEEKQELVEVVEFLKDPRKFAEVGARIPKGVLLV 201
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLA+A+AGEAGVPFF+ +G+DFVEMFVGV ASRV+DLF +A+ AP IIFID
Sbjct: 202 GPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFID 261
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG +GGG EREQ L Q+L EMDGF + +++I ATNR DILDPALLR
Sbjct: 262 EIDAVGRQRGA-GLGGGHDEREQTLNQLLVEMDGFGANEG-IIIIAATNRPDILDPALLR 319
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ + V P +GR A+LKVHARNK ++++ L+ IA T F+GA+L+N+L
Sbjct: 320 PGRFDRQITVDRPDVNGREAVLKVHARNKPL----DENINLRAIATRTPGFSGADLENLL 375
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA ++ AR+D I ++ EA R + S I E+ + +A+ EA V+
Sbjct: 376 NEAALVAARQDKKKIDMSDIDEATDR---VIAGPAKKSRVISEKERNIVAFHEAGHTVIG 432
Query: 586 CHLPDPYRPIIETDIKSIRSQPNMRYAEI---SGRVFSRKNDYLNAIVRACAPRVIEEQM 642
L D + + I R Q YA + R F K + L+ I RV EE +
Sbjct: 433 VVL-DEADVVHKVTIVP-RGQAG-GYAVMLPKEDRYFMTKPELLDKITGLLGGRVAEEIV 489
Query: 643 FG-IDNMCWIS-SKATLDASRLA-EFLI------LQTGMTAFGKAY----YRNQSDLVPN 689
FG + +AT A R+ EF + +Q G + G+ + + ++ +
Sbjct: 490 FGEVSTGAHNDFQRATGIARRMVTEFGMSDKLGPMQFGSSQGGQVFLGRDFHSEQNYSDA 549
Query: 690 LATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDI--YKKAPQ 747
+A +++ M+ + +L + ++ I LLE + AE+I + Y + P+
Sbjct: 550 IAHEIDMEMQTIMKECYARAKQILTDNRDKLDLIAKTLLEVETLDAEQINHLCDYGRLPE 609
Query: 748 IP 749
P
Sbjct: 610 RP 611
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 695 (249.7 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 187/476 (39%), Positives = 263/476 (55%)
Query: 284 LGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVL 343
L S+G++ AK + E V F D AG E K E+ E V LKN +++Q+ G PKG +
Sbjct: 287 LFSVGETTAKVLKDE--IDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAI 344
Query: 344 LHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIF 403
L GPPGTGKTLLAKA AGEA VPF +G++F+EMFVGV +RV+DLFA AR AP I+F
Sbjct: 345 LTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILF 404
Query: 404 IDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPAL 463
IDEIDA+G KRG + GG +E+E L Q+L EMDGF +T+ V++ G TNR DILDPAL
Sbjct: 405 IDEIDAVGRKRGRGNFGGQ-SEQENTLNQLLVEMDGFNTTTNVVILAG-TNRPDILDPAL 462
Query: 464 LRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQN 523
LR GRFD+ + +G P GR +I KVH R S EKD L +++A LT F+GA++ N
Sbjct: 463 LRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVAN 522
Query: 524 ILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDI--PEELKLRLAYREAAV 581
+ NEA ++ AR D I ++ +A++R G G E T + PEE K +AY EA
Sbjct: 523 VCNEAALIAARHLSDAINEKHFEQAIERVIG----GLEKKTQVLQPEEKKT-VAYHEAGH 577
Query: 582 AVLACHLPDPYRPIIETDIKSIRSQPNMRYAEI--SGRVFSRKNDYLNAIVRACAPRVIE 639
AV +L + P+++ I I + YA+ + K L+ + RV E
Sbjct: 578 AVAGWYL-EHADPLLKVSI--IPRGKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSE 634
Query: 640 EQMFGIDNMCWISSKATLDASRLAEFLILQTGMTA-FGKAYYR--NQSDLV---PNLATK 693
E FG + S A+ I+Q GM G+ + Q D+V P
Sbjct: 635 EIFFGRITTGAQDDLRKVTQSAYAQ--IVQFGMNEKVGQISFDLPRQGDMVLEKPYSEAT 692
Query: 694 LEALRDEY---MRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
+ DE + A ++ ++L E + VE + +LLEK + ++ ++ P
Sbjct: 693 ARMIDDEVRILISEAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRP 748
Score = 38 (18.4 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 804 DETWKLIDSI--WDKRVEEIKAEASMEVEEDNQK 835
DE L + + W+K E+ K E + E N+K
Sbjct: 766 DEDTSLPEGLQDWNKEREKEKKEKKEKEEPVNEK 799
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
Identities = 195/483 (40%), Positives = 271/483 (56%)
Query: 283 ALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGV 342
A+G GKS+AK ++ E+ VTFDD AG + K EL+EIV L+N ++F G PKG
Sbjct: 135 AMG-FGKSKAKMLT-EKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPKGA 192
Query: 343 LLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSII 402
LL GPPGTGKTLLA+AIAGEAGVPFF +G+DFVEMFVGV ASRV+D+F A+ AP I+
Sbjct: 193 LLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIV 252
Query: 403 FIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPA 462
FIDEIDA+G RG GGG EREQ L Q+L EMDGF+ + V+++ ATNR D+LDPA
Sbjct: 253 FIDEIDAVGRHRGA-GYGGGNDEREQTLNQLLVEMDGFEANEG-VIILAATNRKDVLDPA 310
Query: 463 LLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQ 522
LLR GRFD+ V VG P GR IL VHAR ++ DV L+ IA T F+GA+L
Sbjct: 311 LLRPGRFDRNVTVGNPDIKGREKILGVHAR----KTPLGPDVDLRIIARGTPGFSGADLA 366
Query: 523 NILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQED-STDIPEELKLRLAYREAAV 581
N++NEA ++ AR ++ E+ A K G E S + ++ K + AY EA
Sbjct: 367 NLVNEAALMAARVGRRFVTMEDFENA----KDKVMMGAERRSMVLTQDQKEKTAYHEAGH 422
Query: 582 AVLACHLP--DP-YRP-IIETD--IKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAP 635
AV+ LP DP Y+ II + + S P M R+ +++ + A
Sbjct: 423 AVVGLALPMCDPVYKATIIPRGGALGMVVSLPEM------DRLNWHRDECQQKLAMTMAG 476
Query: 636 RVIEEQMFGIDNMCWISSKATLDASRLAEFLILQTGMTA------FGKA---YYRNQSDL 686
+ E +G D++ + AS+LA ++++ GM+ + +A Y N +
Sbjct: 477 KAAEILKYGEDHVSNGPAGDIQQASQLARAMVMRWGMSDKVGNIDYAEAHEGYSGNTAGF 536
Query: 687 VPNLATKLEALRDEYMRF---AVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYK 743
+ TK E + +E RF ++ ++L E + + LLE + EEI + K
Sbjct: 537 SVSAHTK-ELIEEEVKRFIQQGYDQAHAILTERREDWDRLAQGLLEYETLTGEEIKRVMK 595
Query: 744 KAP 746
P
Sbjct: 596 GEP 598
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
Identities = 195/483 (40%), Positives = 271/483 (56%)
Query: 283 ALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGV 342
A+G GKS+AK ++ E+ VTFDD AG + K EL+EIV L+N ++F G PKG
Sbjct: 135 AMG-FGKSKAKMLT-EKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPKGA 192
Query: 343 LLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSII 402
LL GPPGTGKTLLA+AIAGEAGVPFF +G+DFVEMFVGV ASRV+D+F A+ AP I+
Sbjct: 193 LLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIV 252
Query: 403 FIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPA 462
FIDEIDA+G RG GGG EREQ L Q+L EMDGF+ + V+++ ATNR D+LDPA
Sbjct: 253 FIDEIDAVGRHRGA-GYGGGNDEREQTLNQLLVEMDGFEANEG-VIILAATNRKDVLDPA 310
Query: 463 LLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQ 522
LLR GRFD+ V VG P GR IL VHAR ++ DV L+ IA T F+GA+L
Sbjct: 311 LLRPGRFDRNVTVGNPDIKGREKILGVHAR----KTPLGPDVDLRIIARGTPGFSGADLA 366
Query: 523 NILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQED-STDIPEELKLRLAYREAAV 581
N++NEA ++ AR ++ E+ A K G E S + ++ K + AY EA
Sbjct: 367 NLVNEAALMAARVGRRFVTMEDFENA----KDKVMMGAERRSMVLTQDQKEKTAYHEAGH 422
Query: 582 AVLACHLP--DP-YRP-IIETD--IKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAP 635
AV+ LP DP Y+ II + + S P M R+ +++ + A
Sbjct: 423 AVVGLALPMCDPVYKATIIPRGGALGMVVSLPEM------DRLNWHRDECQQKLAMTMAG 476
Query: 636 RVIEEQMFGIDNMCWISSKATLDASRLAEFLILQTGMTA------FGKA---YYRNQSDL 686
+ E +G D++ + AS+LA ++++ GM+ + +A Y N +
Sbjct: 477 KAAEILKYGEDHVSNGPAGDIQQASQLARAMVMRWGMSDKVGNIDYAEAHEGYSGNTAGF 536
Query: 687 VPNLATKLEALRDEYMRF---AVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYK 743
+ TK E + +E RF ++ ++L E + + LLE + EEI + K
Sbjct: 537 SVSAHTK-ELIEEEVKRFIQQGYDQAHAILTERREDWDRLAQGLLEYETLTGEEIKRVMK 595
Query: 744 KAP 746
P
Sbjct: 596 GEP 598
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 188/472 (39%), Positives = 266/472 (56%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S G+S+AK + ++ T +TF + AG + K+E+ E+V LK+ E+FQ G PKG+LL
Sbjct: 140 SFGRSKAKLFNMDKPT-ITFANVAGVDEAKQEVGEVVEFLKSREKFQALGARIPKGILLI 198
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKAIAGEAGVPFF+ +G++FVEMFVGV ASRV+DLF A+ AP IIFID
Sbjct: 199 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFID 258
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG +GGG EREQ L QIL EMDGF TS V+VI ATNR DILDPALLR
Sbjct: 259 EIDAVGRQRGA-GLGGGHDEREQTLNQILVEMDGFDTDTS-VIVIAATNRPDILDPALLR 316
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V + P GR AILK+HA+ K V L+ +A+ T F+GA+L N+L
Sbjct: 317 PGRFDRRVVLDKPDITGREAILKIHAKGKPLADT----VNLENLAKQTVGFSGADLANLL 372
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA IL ARK+ + E+L E++ R + S I + K AY E L
Sbjct: 373 NEAAILAARKNRKVVETEDLEESIDR---VIAGPERKSRRISTQEKEVTAYHETGHG-LV 428
Query: 586 CHLPDPYRPIIETDIKSI-RSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMFG 644
L P+ + I + + + R R ++ + + A V EE F
Sbjct: 429 LRLVQGADPVHKISIVARGMTLGHTRQLPNEDRYLMTRSQFKAMMAGLLAGYVAEELTF- 487
Query: 645 IDNMCWISSKATLDASRLAEFLILQTGMT-AFGKAYYRNQSDLV---------PNLATKL 694
+ +S A+ +A ++ GM+ G + N+ ++V + K+
Sbjct: 488 -KELSTGASDDLRRATDIAHKMVTSYGMSDKLGPRTFGNKEEMVFLGREISEQKDYGEKV 546
Query: 695 EALRDEYMRFAVE----KCASVLREYHSAVETITDILLEKGEIKAEEIWDIY 742
+ DE +R +E K ++L E + ++ I + L EK ++ E+ +++
Sbjct: 547 ADMIDEEVRGLIEEAHQKAKTILTENKNRLKFIAEKLFEKETLEGAELENLF 598
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 193/499 (38%), Positives = 276/499 (55%)
Query: 281 RRALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPK 340
R G GKSRAK +S ++ TF D AG + EL EI L+N +Q G PK
Sbjct: 140 RMGFG-FGKSRAKQLS-KDMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIPK 197
Query: 341 GVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPS 400
GVLL+GPPGTGKTLLA+A+AGEAGVPFF +G+DFVEMFVGV ASRV+DLF A+ +P
Sbjct: 198 GVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPC 257
Query: 401 IIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILD 460
IIF+DEIDA+G +RG +GGG EREQ L Q+L EMDGF + V++I ATNR DILD
Sbjct: 258 IIFVDEIDAVGRQRGA-GLGGGHDEREQTLNQLLVEMDGFG-DRAGVILIAATNRPDILD 315
Query: 461 PALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAE 520
PALLR GRFD+ + V P GR A+L+VH++ K ++ + D L A+ T TGA+
Sbjct: 316 PALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGL----AKRTVGMTGAD 371
Query: 521 LQNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAA 580
L N++NEA +LTAR++ I L EA+ R G + I E+ K AY E
Sbjct: 372 LANVINEAALLTARENGTVITGPALEEAVDRVIGG---PRRKGRIISEQEKKITAYHEGG 428
Query: 581 VAVLACHLPDPYRPIIETDIKSIRSQPNMRYAEI--SGRVFSRKNDYLNAIVRACAPRVI 638
+ A +PD PI + I + R + + + +++ + +V A R
Sbjct: 429 HTLAAWAMPD-IEPIYKVTILA-RGRTGGHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAA 486
Query: 639 EEQMFGIDNMCWISSKATLDASRLAEFLILQTGMTA-FGKAYYRNQ-SD--LVPNLATKL 694
EE +F +S A+++A ++ + GM++ G Y ++ D L + T+
Sbjct: 487 EELVFREPTTGAVSDIE--QATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQP 544
Query: 695 ----EALR--DEYMRFAVEKCAS----VLREYHSAVETITDILLEKGEIKAEEIWDIYKK 744
E R DE +R +E + +L EY ++T+ LLEK + E+ I+
Sbjct: 545 DYSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFAD 604
Query: 745 APQIPQPAVSPVDEYGALI 763
+ +P ++ D++G I
Sbjct: 605 VEK--RPRLTMFDDFGGRI 621
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 194/477 (40%), Positives = 262/477 (54%)
Query: 286 SLGKSRAKFISAEETTG-VTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLL 344
+ GKSRAK ++ E G VTF+D AG + K EL+EI++ LK+ ++F G PKGVLL
Sbjct: 134 AFGKSRAKLLT--EAQGRVTFEDVAGVDEAKEELEEIIQFLKDPKKFTKLGGRIPKGVLL 191
Query: 345 HGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFI 404
GPPGTGKTLLA+A+AGEAGVPFF+ +G+DFVEMFVGV ASRV+DLF + AP IIFI
Sbjct: 192 VGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFI 251
Query: 405 DEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALL 464
DEIDA+G RG +GGG EREQ L Q+L EMDGF+ S V++I ATNR D+LDPALL
Sbjct: 252 DEIDAVGRHRGA-GLGGGHDEREQTLNQLLVEMDGFE-SNEGVILIAATNRPDVLDPALL 309
Query: 465 RKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNI 524
R GRFD+ V V P GR ILKVH + S DV L IA T F+GA+L N+
Sbjct: 310 RPGRFDRQVVVPQPDVKGREMILKVHTKKTPLAS----DVDLGVIARGTPGFSGADLSNV 365
Query: 525 LNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQED-STDIPEELKLRLAYREAAVAV 583
+NEA +L ARKD ++ ++ +A K G E S I EE K AY EA +
Sbjct: 366 VNEAALLAARKDKSFVEMKDFDDA----KDKVLMGVERRSMVISEEEKKNTAYHEAGHTL 421
Query: 584 LACHLP--DPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQ 641
+A +P DP + + I R+ I + K LN I R EE
Sbjct: 422 VAKLIPGTDPVHKV--SIIPRGRALGVTMQLPIEDKHSYNKESLLNRIAVLMGGRAAEEI 479
Query: 642 MFGIDNMCWISSKATLD-ASRLAEFLILQTGMT------AFGKA----YYRNQSDLVPNL 690
+F N + ++ A+ +A ++ + GM+ FGK + + N
Sbjct: 480 IF---NELTTGAGNDIERATEIARKMVCEWGMSEKMGPVTFGKKEESIFLGRDMSMHKNY 536
Query: 691 ATKLEALRDEYMRFAVE----KCASVLREYHSAVETITDILLEKGEIKAEEIWDIYK 743
+ DE +R ++ + +L E S + + L+EK + +E+ I K
Sbjct: 537 SEATAVEIDEEIRKIIDGSYSRVKQLLNENLSVLHCLATQLIEKENLTGDEVDRIIK 593
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 680 (244.4 bits), Expect = 3.3e-69, Sum P(2) = 3.3e-69
Identities = 179/446 (40%), Positives = 246/446 (55%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S GKS+A+ ++ E+ TF D AG + K E+ E+V L+ FQ G PKGVL+
Sbjct: 133 SFGKSKARMLT-EDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMV 191
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKAIAGEA VPFF +G+DFVEMFVGV ASRV+D+F A+ AP IIFID
Sbjct: 192 GPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFID 251
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG +GGG EREQ L Q+L EMDGF+ ++VI ATNR D+LDPALLR
Sbjct: 252 EIDAVGRQRGA-GLGGGHDEREQTLNQMLVEMDGFE-GNEGIIVIAATNRPDVLDPALLR 309
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V VGLP GR ILKVH R R D+ IA T F+GA+L N++
Sbjct: 310 PGRFDRQVVVGLPDVRGREQILKVHMR----RVPLAPDIDAAIIARGTPGFSGADLANLV 365
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQED-STDIPEELKLRLAYREAAVAVL 584
NEA + AR + + E +A K G E S + E K AY EA A++
Sbjct: 366 NEAALFAARGNKRVVSMVEFEKA----KDKIMMGAERRSMVMTEAQKESTAYHEAGHAII 421
Query: 585 ACHLPDPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRAC-APRVIEEQMF 643
+P+ + P+ + I + + G S L + + R+ EE ++
Sbjct: 422 GRLVPE-HDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIY 480
Query: 644 GIDNMCWISSKATLDASRLAEFLILQTGMTA-FGKAYYRNQSDLV--PNLATKLEALRDE 700
G +++ +S A+ LA ++ Q G + G Y + V K + + DE
Sbjct: 481 GPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDE 540
Query: 701 YMRFAVEKCASVL-REYHSAVETITD 725
R ++ +++ R Y+ A + +TD
Sbjct: 541 TARIIDQEVKALIERNYNRARQLLTD 566
Score = 40 (19.1 bits), Expect = 3.3e-69, Sum P(2) = 3.3e-69
Identities = 12/50 (24%), Positives = 27/50 (54%)
Query: 104 LERQLVLASEWSRVLMTMCGRLKGTELDPENSHRIDFSDFWKLLNSNSVQ 153
+ + L+L + VLM++ +E N ++D+S F + +N++ V+
Sbjct: 1 MAKNLILWLVIAVVLMSVFQSFGPSE---SNGRKVDYSTFLQEVNNDQVR 47
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 673 (242.0 bits), Expect = 4.2e-69, Sum P(2) = 4.2e-69
Identities = 189/511 (36%), Positives = 277/511 (54%)
Query: 285 GSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLL 344
G G+S A+ I+ E+ V F D AG E K E+ E V LKN +++++ G PKG +L
Sbjct: 273 GGFGQSTARVINREDIK-VKFADVAGCEEAKIEIMEFVNFLKNPQQYKDLGAKIPKGAIL 331
Query: 345 HGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFI 404
GPPGTGKTLLAKA AGEA VPF +G++F+EMFVGV +RV+D+F+ AR +P I+FI
Sbjct: 332 TGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDMFSMARKNSPCILFI 391
Query: 405 DEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALL 464
DEIDA+G KRGG GG +E+E L Q+L EMDGF S V+VI ATNR+DILD ALL
Sbjct: 392 DEIDAVGRKRGGKGGMGGHSEQENTLNQLLVEMDGFTTDESSVIVIAATNRVDILDSALL 451
Query: 465 RKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNI 524
R GRFD+ + V +P GR +I +VH R+ +K VL +++A T F+GA++ N+
Sbjct: 452 RPGRFDRQIYVPVPDIKGRASIFRVHLGP--LRTSLDKTVLSRKLAAHTPGFSGADISNV 509
Query: 525 LNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDI-PEELKLRLAYREAAVAV 583
NEA ++ AR I + +A++R G E T + +E K +AY EA A+
Sbjct: 510 CNEAALIAARDANHEISNKHFEQAIER----VVAGMEKKTQVLQKEEKKTVAYHEAGHAI 565
Query: 584 LACHLPDPYRPIIETDIKSIRSQPNMRYAEISGR---VFSRKNDYLNAIVRACAPRVIEE 640
L P+++ I I + YA+ + ++S K+ L+ + RV EE
Sbjct: 566 AGWFLQHA-DPLLKVSI--IPRGKGLGYAQYLPKEQYLYS-KDQLLDRMCMTLGGRVAEE 621
Query: 641 QMFG-IDNMCWIS-SKATLDA-SRLAEF--------LILQT---GMTAFGKAYYRNQSDL 686
FG I K T A S++ +F L +T G AF K Y + L
Sbjct: 622 IFFGRITTGAQDDLQKVTQMAYSQVVKFGMSEKVGPLSFETPAPGEMAFDKPYSEATAQL 681
Query: 687 VPNLATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
+ + +RD M A+ + +L E S +E + LLEK + E++ ++ K P
Sbjct: 682 ID------QEVRDLVMN-ALRRTRDLLLEKRSDIERVALRLLEKEILNREDMIELVGKRP 734
Query: 747 QIPQPAVSPVDEYGALIYAGRWGI-QGVSLP 776
+ + + Y ++ +G G+ + V LP
Sbjct: 735 FVEK------NTYEEMV-SGTGGLDENVELP 758
Score = 46 (21.3 bits), Expect = 4.2e-69, Sum P(2) = 4.2e-69
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 273 QKTRQPLQRRALGSLGKS-RAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEF 331
+KT + L R ++ S KS ++ S + V DD + +K+ QE++ +L D+ F
Sbjct: 6 RKTPKQL-RNSVESCFKSVNSRQFSVSSFSAVAKDD---KSVLKQ--QEVLHLLAKDQRF 59
Query: 332 QNK 334
+ +
Sbjct: 60 EER 62
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 188/476 (39%), Positives = 263/476 (55%)
Query: 284 LGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVL 343
L S+G++ AK + E V F D AG E K E+ E V LKN +++Q+ G PKG +
Sbjct: 288 LFSVGETTAKVLKDE--IDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAI 345
Query: 344 LHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIF 403
L GPPGTGKTLLAKA AGEA VPF +G++F+EMFVGV +RV+DLFA AR AP I+F
Sbjct: 346 LTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILF 405
Query: 404 IDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPAL 463
IDEIDA+G KRG + GG +E+E L Q+L EMDGF +T+ V++ G TNR DILDPAL
Sbjct: 406 IDEIDAVGRKRGRGNFGGQ-SEQENTLNQLLVEMDGFNTTTNVVILAG-TNRPDILDPAL 463
Query: 464 LRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQN 523
LR GRFD+ + +G P GR +I KVH R S EKD L +++A LT F+GA++ N
Sbjct: 464 LRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVAN 523
Query: 524 ILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDI--PEELKLRLAYREAAV 581
+ NEA ++ AR D I Q+ +A++R G G E T + PEE K +AY EA
Sbjct: 524 VCNEAALIAARHLSDSINQKHFEQAIERVIG----GLEKKTQVLQPEEKKT-VAYHEAGH 578
Query: 582 AVLACHLPDPYRPIIETDIKSIRSQPNMRYAEI--SGRVFSRKNDYLNAIVRACAPRVIE 639
AV +L + P+++ I I + YA+ + K L+ + RV E
Sbjct: 579 AVAGWYL-EHADPLLKVSI--IPRGKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSE 635
Query: 640 EQMFGIDNMCWISSKATLDASRLAEFLILQTGMTA-FGKAYYR--NQSDLV---PNLATK 693
E FG + S A+ I+Q GM G+ + Q D+V P
Sbjct: 636 EIFFGRITTGAQDDLRKVTQSAYAQ--IVQFGMNEKVGQISFDLPRQGDMVLEKPYSEAT 693
Query: 694 LEALRDEY---MRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
+ DE + A ++ ++L E + VE + +LLEK + ++ ++ P
Sbjct: 694 ARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRP 749
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 177/469 (37%), Positives = 254/469 (54%)
Query: 281 RRALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPK 340
R + +GKSRA+ + E + F D AG + K E+ E V LK+ E FQ G P+
Sbjct: 377 RNGIFGIGKSRARRFNHETDVKIKFSDVAGMDEAKVEIMEFVSFLKSPERFQKLGAKIPR 436
Query: 341 GVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPS 400
G +L GPPGTGKTLLAKA AGE+GVPFF+ +G++FVEMFVGV SRV+DLFA+AR P
Sbjct: 437 GAILSGPPGTGKTLLAKATAGESGVPFFSVSGSEFVEMFVGVGPSRVRDLFANARKNTPC 496
Query: 401 IIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILD 460
IIFIDEIDAIG R + GG ERE L QILTEMDGF S QV+V+ TNR D+LD
Sbjct: 497 IIFIDEIDAIGKSRSAKNFSGGNDERESTLNQILTEMDGFNTS-DQVVVLAGTNRPDVLD 555
Query: 461 PALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAE 520
AL+R GRFD+ + + P+ DGR I +VH K ++E+ D L ++ LT F GA+
Sbjct: 556 KALMRPGRFDRHISIDRPTMDGRKQIFRVHL--KKIVTKEDMDYLTGRLSALTPGFAGAD 613
Query: 521 LQNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAA 580
+ N +NEA ++ AR++ + + + A++R G E ++ PEE K +AY EA
Sbjct: 614 IANCVNEAALVAARENAESVTMKHFERAIERVVGGLE--KKSLVLSPEE-KRTVAYHEAG 670
Query: 581 VAVLACHLPDPYRPIIETDIKSIRSQPNMRYAEI---SGRVF-SRKNDYLNAIVRACAPR 636
A+ + P+++ I R Q + YA+ +G + N ++ + R
Sbjct: 671 HAICGWYFRWA-DPLLKVSIIP-RGQGALGYAQYLPANGDTYLMTANQMMDRMAMTLGGR 728
Query: 637 VIEEQMFGIDNMCWISSKATLDASRLAEFLILQTGMTAFGK-AYYRNQSDLVPNLATKLE 695
V EE F D + +S +RLA ++ + GM+ K YY + E
Sbjct: 729 VSEELHF--DTVTSGASDDFNKVTRLATAMVTKFGMSPKLKYIYYEEDPSSQLHKPFSEE 786
Query: 696 ALRD---EYMRF---AVEKCASVLREYHSAVETITDILLEKGEIKAEEI 738
+D E R A ++C +L V + + LL K + +++
Sbjct: 787 TAKDIDIEVRRIVNEAYKQCRDLLTAKKKEVGLVAEELLAKEVLSRDDM 835
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 187/477 (39%), Positives = 267/477 (55%)
Query: 284 LGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVL 343
L S+G++ AK + E V F D AG E K E+ E V LKN +++Q+ G PKG +
Sbjct: 289 LFSVGETTAKVLKDE--IDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAI 346
Query: 344 LHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIF 403
L GPPGTGKTLLAKA AGEA VPF +G++F+EMFVGV +RV+DLFA AR AP I+F
Sbjct: 347 LTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILF 406
Query: 404 IDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPAL 463
IDEIDA+G KRG + GG +E+E L Q+L EMDGF +T+ V++ G TNR DILDPAL
Sbjct: 407 IDEIDAVGRKRGRGNFGGQ-SEQENTLNQLLVEMDGFNTTTNVVILAG-TNRPDILDPAL 464
Query: 464 LRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQN 523
+R GRFD+ + +G P GR +I KVH R S EK+ L +++A LT F+GA++ N
Sbjct: 465 MRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVAN 524
Query: 524 ILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDI--PEELKLRLAYREAAV 581
+ NEA ++ AR D I Q+ +A++R G G E T + PEE K +AY EA
Sbjct: 525 VCNEAALIAARHLSDSINQKHFEQAIERVIG----GLEKKTQVLQPEEKKT-VAYHEAGH 579
Query: 582 AVLACHLPDPYRPIIETDIKSIRSQPNMRYAEISGR---VFSRKNDYLNAIVRACAPRVI 638
AV +L + P+++ I I + YA+ R +++R+ L+ + RV
Sbjct: 580 AVAGWYL-EHADPLLKVSI--IPRGKGLGYAQYLPREQYLYTREQ-LLDRMCMTLGGRVS 635
Query: 639 EEQMFGIDNMCWISSKATLDASRLAEFLILQTGMTA-FGKAYYR--NQSDLV---PNLAT 692
EE FG + S A+ I+Q GM G+ + Q D+V P
Sbjct: 636 EEIFFGRITTGAQDDLRKVTQSAYAQ--IVQFGMNEKVGQISFDLPRQGDMVLEKPYSEA 693
Query: 693 KLEALRDEY---MRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
+ DE + A ++ ++L E + VE + +LLEK + ++ ++ P
Sbjct: 694 TARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRP 750
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 189/493 (38%), Positives = 270/493 (54%)
Query: 284 LGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVL 343
L S+G++ AK + E V F D AG E K E+ E V LKN +++Q+ G PKG +
Sbjct: 289 LFSVGETTAKVLKDE--IDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAI 346
Query: 344 LHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIF 403
L GPPGTGKTLLAKA AGEA VPF +G++F+EMFVGV +RV+DLFA AR AP I+F
Sbjct: 347 LTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILF 406
Query: 404 IDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPAL 463
IDEIDA+G KRG + GG +E+E L Q+L EMDGF +T+ V++ G TNR DILDPAL
Sbjct: 407 IDEIDAVGRKRGRGNFGGQ-SEQENTLNQLLVEMDGFNTTTNVVILAG-TNRPDILDPAL 464
Query: 464 LRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQN 523
+R GRFD+ + +G P GR +I KVH R S EK+ L +++A LT F+GA++ N
Sbjct: 465 MRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKEKLARKLASLTPGFSGADVAN 524
Query: 524 ILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDI--PEELKLRLAYREAAV 581
+ NEA ++ AR D I Q+ +A++R G G E T + PEE K +AY EA
Sbjct: 525 VCNEAALIAARHLSDSINQKHFEQAIERVIG----GLEKKTQVLQPEEKKT-VAYHEAGH 579
Query: 582 AVLACHLPDPYRPIIETDIKSIRSQPNMRYAEI--SGRVFSRKNDYLNAIVRACAPRVIE 639
AV +L + P+++ I I + YA+ + K L+ + RV E
Sbjct: 580 AVAGWYL-EHADPLLKVSI--IPRGKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSE 636
Query: 640 EQMFGIDNMCWISSKATLDASRLAEFLILQTGMTA-FGKAYYR--NQSDLV---PNLATK 693
E FG + S A+ I+Q GM G+ + Q D+V P
Sbjct: 637 EIFFGRITTGAQDDLRKVTQSAYAQ--IVQFGMNEKVGQISFDLPRQGDMVLEKPYSEAT 694
Query: 694 LEALRDEY---MRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAPQIPQ 750
+ DE + A ++ ++L E + VE + +LLEK + ++ ++ P + +
Sbjct: 695 ARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPFVEK 754
Query: 751 PAVSP-VDEYGAL 762
V+ G+L
Sbjct: 755 STYEEFVEGTGSL 767
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 183/479 (38%), Positives = 260/479 (54%)
Query: 281 RRALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPK 340
R + L +S+AK + E + F D AG + K E+ E V LK ++ G P+
Sbjct: 323 RGGIFGLSRSKAKKFNTETDVKIKFKDVAGCDEAKEEIMEFVSFLKEPSRYEKMGAKIPR 382
Query: 341 GVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPS 400
G +L GPPGTGKTLLAKA AGEAGVPF+ +G++FVEMFVGV A+RV+DLF +AR APS
Sbjct: 383 GAILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPS 442
Query: 401 IIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILD 460
I+FIDEIDAIG R + G ERE L Q+L EMDGF V+V+ TNR DILD
Sbjct: 443 IVFIDEIDAIGKARQKGNFSGANDERENTLNQMLVEMDGF-TPADHVVVLAGTNRPDILD 501
Query: 461 PALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAE 520
ALLR GRFD+ + + P +GR AI VH + + E L +A LT F+GA+
Sbjct: 502 KALLRPGRFDRHINIDKPELEGRKAIFAVHLH--HLKLAGEIFDLKNRLAALTPGFSGAD 559
Query: 521 LQNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAA 580
+ N+ NEA ++ AR D D + +A++R G E ++ PEE K+ +AY EA
Sbjct: 560 IANVCNEAALIAARSDEDAVKLNHFEQAIERVIGGVE--RKSKLLSPEEKKV-VAYHEAG 616
Query: 581 VAVLACHLPDPYR-PIIETDIKSIRSQPNMRYAE-ISGRVFSRKNDYL-NAIVRACAPRV 637
AV +L Y P+++ I R Q + YA+ + G +F L + + + RV
Sbjct: 617 HAVCGWYLK--YADPLLKVSIIP-RGQGALGYAQYLPGDIFLLTEQQLKDRMTMSLGGRV 673
Query: 638 IEEQMFGIDNMCWISSKATLDASR---LAEFLILQTGMT-AFGKAYY--RNQSDLVPNLA 691
EE F ++S A+ D + +A ++ + GM+ G Y R+ SDL +
Sbjct: 674 SEELHFPS-----VTSGASDDFKKVTSMATAMVTELGMSDKIGWVNYQKRDDSDLTKPFS 728
Query: 692 TKLEALRD-EYMRFAVE---KCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
+ + D E R E +C +L+E VE I +LL+K + E++ D+ K P
Sbjct: 729 DETGDIIDSEVYRIVQECHDRCTKLLKEKAEDVEKIAQVLLKKEVLTREDMIDLLGKRP 787
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 186/460 (40%), Positives = 256/460 (55%)
Query: 284 LGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVL 343
L S+G++ AK + E V F D AG E K E+ E V LKN +++Q+ G PKG +
Sbjct: 287 LFSVGETTAKVLKDE--IDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAI 344
Query: 344 LHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIF 403
L GPPGTGKTLLAKA AGEA VPF +G++F+EMFVGV +RV+DLFA AR AP I+F
Sbjct: 345 LTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILF 404
Query: 404 IDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPAL 463
IDEIDA+G KRG + GG +E+E L Q+L EMDGF +T+ V++ G TNR DILDPAL
Sbjct: 405 IDEIDAVGRKRGRGNFGGQ-SEQENTLNQLLVEMDGFNTTTNVVILAG-TNRPDILDPAL 462
Query: 464 LRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQN 523
LR GRFD+ + +G P GR +I KVH R S EKD L +++A LT F+GA++ N
Sbjct: 463 LRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVAN 522
Query: 524 ILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDI--PEELKLRLAYREAAV 581
+ NEA ++ AR D I ++ +A++R G G E T + PEE K +AY EA
Sbjct: 523 VCNEAALIAARHLSDAINEKHFEQAIERVIG----GLEKKTQVLQPEEKKT-VAYHEAGH 577
Query: 582 AVLACHLPDPYRPIIETDIKSIRSQPNMRYAEI--SGRVFSRKNDYLNAIVRACAPRVIE 639
AV +L + P+++ I I + YA+ + K L+ + RV E
Sbjct: 578 AVAGWYL-EHADPLLKVSI--IPRGKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSE 634
Query: 640 EQMFGIDNMCWISSKATLDASRLAEFLILQTGMTA-FGKAYYR--NQSDLV---PNLATK 693
E FG + S A+ I+Q GM G+ + Q D+V P
Sbjct: 635 EIFFGRITTGAQDDLRKVTQSAYAQ--IVQFGMNEKVGQISFDLPRQGDMVLEKPYSEAT 692
Query: 694 LEALRDEY---MRFAVEKCASVLREYHSAVETITDILLEK 730
+ DE + A + ++L E + VE + +LLEK
Sbjct: 693 ARMIDDEVRILISDAYRRTVALLTEKKADVEKVALLLLEK 732
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 178/469 (37%), Positives = 258/469 (55%)
Query: 287 LGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHG 346
+GKSRAK + E + F D AG + K E+ E V+ LKN + ++ G P+G +L G
Sbjct: 277 IGKSRAKMFNHETDIKIKFADVAGVDEAKEEIMEFVKFLKNPKFYERLGAKIPRGAILSG 336
Query: 347 PPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDE 406
PPGTGKTLLAKA AGEA VPF + +G++F+EMFVGV SRV+DLFA+AR AP IIFIDE
Sbjct: 337 PPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDE 396
Query: 407 IDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRK 466
IDAIG RG G ERE L Q+L EMDGF S+ ++V TNR D+LDPALLR
Sbjct: 397 IDAIGKARGRGGQFGSNDERESTLNQLLVEMDGF-TSSEHIVVFAGTNRPDVLDPALLRP 455
Query: 467 GRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILN 526
GRFD+ + + P GR I KVH K+ ++ + D++ + +A LT FTGA++ N+ N
Sbjct: 456 GRFDRQITIDRPDIGGREQIFKVHL--KHIKAADNIDLIAKRLAVLTSGFTGADIMNVCN 513
Query: 527 EAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLAC 586
E ++ AR + + + +A++R E ++ PEE K +A+ EA AV
Sbjct: 514 EGALIAARSNSNEVQMVHFEQAIERVTAGLE--KKSRVLSPEE-KNTVAHHEAGHAVAGW 570
Query: 587 HLPDPYRPIIETDIKSIRSQPNMRYAEI--SGRVFSRKNDYLNAIVRACAPRVIEEQMFG 644
+ + P+++ I R+Q + YA + + L+ + A A RV EE FG
Sbjct: 571 FM-EYVDPLLKVSIIP-RAQA-LGYASYLPKDQYLMSRGQILDQMGMALAGRVSEEIFFG 627
Query: 645 IDNMCWISSKATLDASRLAEFLILQTGMT-AFGK-AYYRNQSDLVPNLATKLEA-LRDEY 701
+ + +S +R+A+ + Q GM+ G AY + + V ++ A + DE
Sbjct: 628 PEKITSGASDDFQKVTRMAQAYVTQYGMSPTVGTIAYPIDTRETVQKPFSEATAQMIDEE 687
Query: 702 MR----FAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
+R A E+ +L E+ +E I LL+K I E+ I P
Sbjct: 688 IRKLVKHAYERTKKLLLEHKQGLENIAQRLLQKEVITYNEVETILGPRP 736
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 188/479 (39%), Positives = 265/479 (55%)
Query: 284 LGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVL 343
L S+G++ AK + E V F D AG E K E+ E V LKN +++++ G PKG +
Sbjct: 288 LFSVGETTAKVLKDE--IDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYEDLGAKIPKGAI 345
Query: 344 LHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIF 403
L GPPGTGKTLLAKA AGEA VPF NG++F+EMFVGV +RV+DLFA AR AP I+F
Sbjct: 346 LTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILF 405
Query: 404 IDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPAL 463
IDEIDA+G KRG + GG +E+E L Q+L EMDGF +T+ V++ G TNR DILDPAL
Sbjct: 406 IDEIDAVGRKRGRGNFGGQ-SEQENTLNQLLVEMDGFNTTTNVVILAG-TNRPDILDPAL 463
Query: 464 LRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQN 523
+R GRFD+ + +G P GR +I KVH R + +KD L +++A LT F+GA++ N
Sbjct: 464 MRPGRFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIAN 523
Query: 524 ILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDI--PEELKLRLAYREAAV 581
+ NEA ++ AR D I Q+ +A++R G G E T + PEE K +AY EA
Sbjct: 524 VCNEAALIAARHLSDAINQKHFEQAIERVIG----GLEKKTQVLQPEEKKT-VAYHEAGH 578
Query: 582 AVLACHLPDPYRPIIETDIKSIRSQPNMRYAEI--SGRVFSRKNDYLNAIVRACAPRVIE 639
AV L + P+++ I I + YA+ + K L+ + RV E
Sbjct: 579 AVAGWFL-EHADPLLKVSI--IPRGKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSE 635
Query: 640 EQMFGIDNMCWISSKATLDASRLAEFL---ILQTGMTA-FGKAYYR--NQSDLVPNLATK 693
+ FG I++ A D ++ + I+Q GM G+ + Q D+V
Sbjct: 636 QIFFGR-----ITTGAQDDLKKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYS 690
Query: 694 LEALR--DEYMR----FAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
R DE +R A ++ S+L E + VE + LLEK + ++ D+ P
Sbjct: 691 EATARMIDEEVRSLINIAYDRTLSLLTEKKAEVEKVALRLLEKEVLDKSDMVDLLGPRP 749
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 188/479 (39%), Positives = 265/479 (55%)
Query: 284 LGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVL 343
L S+G++ AK + E V F D AG E K E+ E V LKN +++++ G PKG +
Sbjct: 132 LFSVGETTAKVLKDE--IDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYEDLGAKIPKGAI 189
Query: 344 LHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIF 403
L GPPGTGKTLLAKA AGEA VPF NG++F+EMFVGV +RV+DLFA AR AP I+F
Sbjct: 190 LTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILF 249
Query: 404 IDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPAL 463
IDEIDA+G KRG + GG +E+E L Q+L EMDGF +T+ V++ G TNR DILDPAL
Sbjct: 250 IDEIDAVGRKRGRGNFGGQ-SEQENTLNQLLVEMDGFNTTTNVVILAG-TNRPDILDPAL 307
Query: 464 LRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQN 523
+R GRFD+ + +G P GR +I KVH R + +KD L +++A LT F+GA++ N
Sbjct: 308 MRPGRFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIAN 367
Query: 524 ILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDI--PEELKLRLAYREAAV 581
+ NEA ++ AR D I Q+ +A++R G G E T + PEE K +AY EA
Sbjct: 368 VCNEAALIAARHLSDAINQKHFEQAIERVIG----GLEKKTQVLQPEEKKT-VAYHEAGH 422
Query: 582 AVLACHLPDPYRPIIETDIKSIRSQPNMRYAEI--SGRVFSRKNDYLNAIVRACAPRVIE 639
AV L + P+++ I I + YA+ + K L+ + RV E
Sbjct: 423 AVAGWFL-EHADPLLKVSI--IPRGKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSE 479
Query: 640 EQMFGIDNMCWISSKATLDASRLAEFL---ILQTGMTA-FGKAYYR--NQSDLVPNLATK 693
+ FG I++ A D ++ + I+Q GM G+ + Q D+V
Sbjct: 480 QIFFGR-----ITTGAQDDLKKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYS 534
Query: 694 LEALR--DEYMR----FAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
R DE +R A ++ S+L E + VE + LLEK + ++ D+ P
Sbjct: 535 EATARMIDEEVRSLINIAYDRTLSLLTEKKAEVEKVALRLLEKEVLDKSDMVDLLGPRP 593
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 180/473 (38%), Positives = 261/473 (55%)
Query: 288 GKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGP 347
GKS AK + E + F D AG K+E+ E V+ L+N E+++ G P+G +L GP
Sbjct: 355 GKSTAKKFNQETDVKIKFKDVAGMAEAKQEVMEFVKFLQNPEKYEKLGAKIPRGAILSGP 414
Query: 348 PGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEI 407
PGTGKTLLAKA AGEAGVPF++ +G++FVEMFVGV ASRV+DLF +AR APSI+F+DEI
Sbjct: 415 PGTGKTLLAKATAGEAGVPFYSVSGSEFVEMFVGVGASRVRDLFKTARENAPSIVFVDEI 474
Query: 408 DAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKG 467
DAIG +R + G ERE L Q+L EMDGF S V+V+ TNR DILD AL+R G
Sbjct: 475 DAIGKQRSKGNATGANDERETTLNQLLVEMDGFDTS-DHVVVLAGTNRPDILDRALMRPG 533
Query: 468 RFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNE 527
RFD+ V + P GR I VH + + + + D L +A LT F+GA++ N+ NE
Sbjct: 534 RFDRHVHIDNPELLGRKEIFDVHLQKITLQKDIDPD-LSGRLAALTPGFSGADIANVCNE 592
Query: 528 AGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLACH 587
A ++ AR + +++ A++R G E ++ PEE K+ +AY EA A+ +
Sbjct: 593 AALIAARYNAEFVTLRHFELAIERVIGGVE--KKSKLLNPEEQKI-VAYHEAGHAICGWY 649
Query: 588 LPDPYRPIIETDIKSIRSQPNMRYAEI---SGRVFSRKNDYLNAIVRACAPRVIEEQMFG 644
L + P+++ I R Q + YA+ + S Y + ++ RV EE F
Sbjct: 650 LKYAH-PLLKVSIIP-RGQGALGYAQYLPPDQYLMSTLQLY-DRMIMTLGGRVSEELHFA 706
Query: 645 IDNMCWISSKATLDASR---LAEFLILQTGMT-AFGKA-YY--RNQSDLVPNLATKLEAL 697
++S A D + +A+ ++L+ GM+ G YY R+Q DL + + +
Sbjct: 707 S-----VTSGAHDDFKKVTGIAQSMVLRFGMSKTVGMVNYYDTRSQDDLTKPFSDETSRI 761
Query: 698 RD-EYMRFA---VEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
D E R +KC +L E VE + LL+K I E++ + K P
Sbjct: 762 IDSEVQRIVSDCYQKCKQLLTEKSKEVELVAQELLKKEFITREDMIRLLGKRP 814
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 185/479 (38%), Positives = 261/479 (54%)
Query: 284 LGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVL 343
L S+ ++ AK + E V F D AG E K E+ E V LKN +++Q+ G PKG +
Sbjct: 283 LFSVSETTAKVLRDE--IDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAI 340
Query: 344 LHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIF 403
L GPPGTGKTLLAKA AGEA VPF NG++F+EMFVGV +RV+DLF AR AP I+F
Sbjct: 341 LTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILF 400
Query: 404 IDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPAL 463
IDEIDA+G KRG + GG +E+E L Q+L EMDGF +T+ V+V+ TNR DILDPAL
Sbjct: 401 IDEIDAVGRKRGRGNFGGQ-SEQENTLNQLLVEMDGFNTATN-VVVLAGTNRPDILDPAL 458
Query: 464 LRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQN 523
+R GRFD+ + +G P GR +I KVH R +E +K+ L +++A LT F+GA++ N
Sbjct: 459 MRPGRFDRQIYIGPPDIKGRASIFKVHLRPLKLEAELDKEALARKMAALTPGFSGADIAN 518
Query: 524 ILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDI--PEELKLRLAYREAAV 581
+ NEA ++ AR D I Q+ +A++R G G E T + PEE K +AY EA
Sbjct: 519 VCNEAALIAARHLSDAINQKHFEQAIERVIG----GLEKKTQVLQPEEKKT-VAYHEAGH 573
Query: 582 AVLACHLPDPYRPIIETDIKSIRSQPNMRYAEI--SGRVFSRKNDYLNAIVRACAPRVIE 639
AV L + P+++ I I + YA+ + K L+ + RV E
Sbjct: 574 AVAGWFL-EHADPLLKVSI--IPRGKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSE 630
Query: 640 EQMFGIDNMCWISSKATLDASRLAEFL---ILQTGMTA-FGKAYYR--NQSDLV---PNL 690
E FG I++ A D ++ + I+Q GM G+ + Q +LV P
Sbjct: 631 EIFFGR-----ITTGAQDDLKKVTQSAYAQIVQFGMNEKVGQVSFDLPRQGELVLEKPYS 685
Query: 691 ATKLEALRDEYMRF---AVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
+ E A E+ +L + VE + LLEK + ++ ++ K P
Sbjct: 686 EATARLIDTEVRNLISTAYERTQQLLSDKKPEVEKVALRLLEKEVLDKNDMVELLGKRP 744
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
Identities = 183/445 (41%), Positives = 246/445 (55%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S GKS+A+ +S EE TF D AG + K ++ E+V L+ FQ G P G+LL
Sbjct: 135 SFGKSKARQLS-EEQIKTTFADVAGCDEAKEDVAELVDYLREPSRFQKLGGRIPSGILLV 193
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
G PGTGKTLLAKAIAGEA VPFF +G+DFVEMFVGV ASRV+D+F A+ AP IIFID
Sbjct: 194 GQPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFID 253
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG +GGG EREQ L Q+L EMDGF+ V+VI ATNR D+LDPALLR
Sbjct: 254 EIDAVGRQRGA-GMGGGHDEREQTLNQMLVEMDGFE-GNEGVIVIAATNRPDVLDPALLR 311
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V VGLP GR ILKVH R DV + IA T F+GA+L N++
Sbjct: 312 PGRFDRQVTVGLPDIRGREQILKVHMRKVPLGD----DVKAEVIARGTPGFSGADLANLV 367
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRL-AYREAAVAVL 584
NEA + AR + +E A K G E + + E + + AY EA A++
Sbjct: 368 NEAALCAARTARRVVSMKEFDAA----KDKIMMGSERKSMVMSESEREMTAYHEAGHAII 423
Query: 585 ACHLPDPYRPIIETDI-KSIRSQPNMRYAEISGRVFSRKNDYLNAIVRAC-APRVIEEQM 642
+PD + P+ + I R+ Y R FS +L + + + RV EE +
Sbjct: 424 GRLVPD-HDPVYKVSIIPRGRALGVTMYLPEQDR-FSHSKQHLESNISSLYGGRVAEEVI 481
Query: 643 FGIDNMCWISSKATLDASRLAEFLILQTGMTA-FGKAYYRNQSDLVPNLATKLEALR--D 699
+G D + +S A+ +A ++ Q G++ G + + V T ++L D
Sbjct: 482 YGSDKVSTGASNDIERATNIARKMVTQWGLSEKMGPMLFAEEEGEVFLGRTSAKSLHMSD 541
Query: 700 EYMRFAVEKCASVL-REYHSAVETI 723
E + E+ SV+ R Y A + I
Sbjct: 542 ETAKTIDEEIKSVISRNYQRAEDLI 566
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 654 (235.3 bits), Expect = 1.8e-66, Sum P(2) = 1.8e-66
Identities = 179/480 (37%), Positives = 262/480 (54%)
Query: 274 KTRQPLQRRALGSLGKSRA-KFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQ 332
+T + ++ + S GKS A KF + T+ V F D AG K E++E V LKN ++F
Sbjct: 271 RTFRSIKSNKMFSQGKSTANKF--EKSTSTVKFSDVAGLGEAKVEIEEFVNFLKNPKKFH 328
Query: 333 NKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFA 392
+ G P+G +L GPPGTGKTL+AKA AGEA VPF++ +G+DFVEMFVGV SRV+DLF
Sbjct: 329 DIGAKIPRGAILVGPPGTGKTLIAKATAGEANVPFYSTSGSDFVEMFVGVGPSRVRDLFE 388
Query: 393 SARSFAPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGA 452
AR AP I+FIDEIDA+G RG G ERE L Q+L EMDGFK V+V+ A
Sbjct: 389 QARKNAPCIVFIDEIDAVGRARGKGGFSGSNDERENTLNQLLVEMDGFK-PLKNVVVLAA 447
Query: 453 TNRLDILDPALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQE-IAE 511
TNR DILD ALLR GRFD+ + + P R I +VH +K + E +++
Sbjct: 448 TNRPDILDKALLRPGRFDRQITIDNPDLKSREEIFRVHLAALLL----DKSINYAERLSK 503
Query: 512 LTEDFTGAELQNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELK 571
LT F+GA++ N+ NEA ++ AR+ + I E A+ R G E +++ P E K
Sbjct: 504 LTPGFSGADIANVCNEAALIAARRHAEIITLEHFDAAVDRVIGGLE--KKNKVLSPTE-K 560
Query: 572 LRLAYREAAVAVLACHLPDPYRPIIETDIKSIRSQPNMRYAE-ISGRVFSRKNDYL-NAI 629
+AY EA AV++ L + P+++ I R + YA+ + F + + + + +
Sbjct: 561 RTVAYHEAGHAVVSWFLKHCH-PLLKVSIVP-RGVAALGYAQYLPKEQFLQNQEQIFDMM 618
Query: 630 VRACAPRVIEEQMFGIDNMCWISSKATLDASRLAEFLILQT---GMTA-FGK-AYYRNQ- 683
A RV E+ FG I++ A D ++ + Q GM G +Y + Q
Sbjct: 619 CMALGGRVAEQLTFGT-----ITTGAQDDLEKITKMAYSQVSIYGMNEKIGPLSYQKGQD 673
Query: 684 -SDLVPNLATKLEALRDEYMR----FAVEKCASVLREYHSAVETITDILLEKGEIKAEEI 738
SDL + + + DE +R A ++ VL+E+ + ++ ++LLEK I EE+
Sbjct: 674 GSDLTKPYSEETAEVMDEEVRKLLKSAYDRTTQVLQEHREGLISVANLLLEKEVIHFEEV 733
Score = 40 (19.1 bits), Expect = 1.8e-66, Sum P(2) = 1.8e-66
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 126 KGTELDPENSHRIDFSDFWKLLNSNSVQYMEYSNYGQTVSVILPYYKDAKVEGKE 180
K + + +N D D + NS ++ +Y ++ VIL ++ EG E
Sbjct: 118 KDNKDNKDNKDNKDNKDESFMQQMNSPEFKKYLITVISIGVILSLFRPNTEEGNE 172
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 183/457 (40%), Positives = 256/457 (56%)
Query: 284 LGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVL 343
+G+ KS AK + VTFDD AG E K EL+EIV L++ ++FQ G PKGVL
Sbjct: 153 MGNFSKSGAKMYTPSAKVKVTFDDVAGMENPKMELKEIVDYLRDPKKFQRIGGKVPKGVL 212
Query: 344 LHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIF 403
L GPPGTGKTLLA+A+AGEA V F + + + F+EMFVGV A RV+DLFA+A+ APSIIF
Sbjct: 213 LVGPPGTGKTLLARAVAGEADVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSIIF 272
Query: 404 IDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPAL 463
IDE+DA+G RG +GGG EREQ L Q+L+EMDGF S +V+V+ ATNR D+LDPAL
Sbjct: 273 IDELDAVGRSRGA-GLGGGHDEREQTLNQLLSEMDGFD-SHDEVIVMAATNRPDVLDPAL 330
Query: 464 LRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQN 523
LR GRFD+ V + P R IL VH R + +KDV L IA T GA+L+N
Sbjct: 331 LRPGRFDRHVVIDRPDWRDREKILHVHTR----KIPLDKDVDLAVIARGTPGMAGADLEN 386
Query: 524 ILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAV 583
++NEA IL AR++ + +E ++R K G E I E+ K AY EA +
Sbjct: 387 LVNEAAILAARENAATV----TMEHMERAKDKVLMGGERKMFITEQEKRITAYHEAGHTI 442
Query: 584 LACHLP--DPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQ 641
+A LP DP + T I ++ + R K+ +N + A R E
Sbjct: 443 VAKLLPGTDPVHKV--TIIPRGQALGVTQQLPEDDRYHYPKSYLMNRLSVALGGRQAERA 500
Query: 642 MFGIDNMCWISSKATLDASRLAEFLILQTGMTAFGKAYYRNQSDLVPNLATKL--EALRD 699
+FG D + + + LAE ++ Q GM+ A ++ + P L KL E
Sbjct: 501 VFG-DLSTGAQNDLKM-VNDLAEKMVCQWGMSDKIGAMTFSRGEEHPFLGRKLAEEKTFS 558
Query: 700 EYMRFAVEK-CASVLREYHSAVETITDILLEKGEIKA 735
E M + +++ A++++E + + I +G++ A
Sbjct: 559 EQMAWLIDQEIAAIIKEAEQKADNV--IANNRGKLDA 593
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
Identities = 185/465 (39%), Positives = 259/465 (55%)
Query: 284 LGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPK-GV 342
L S+G++ AK + E V F D AG E K E+ E V LKN +++Q+ G PK G
Sbjct: 79 LFSVGETTAKVLKDE--IDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKKGA 136
Query: 343 LLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSII 402
+L GPPGTGKTLLAKA AGEA VPF +G++F+EMFVGV +RV+DLFA AR AP I+
Sbjct: 137 ILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCIL 196
Query: 403 FIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPA 462
FIDEIDA+G KRG + GG +E+E L Q+L EMDGF +T+ V++ G TNR DILDPA
Sbjct: 197 FIDEIDAVGRKRGRGNFGGQ-SEQENTLNQLLVEMDGFNTTTNVVILAG-TNRPDILDPA 254
Query: 463 LLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQ 522
LLR GRFD+ + +G P GR +I KVH R S EK+ L +++A LT F+GA++
Sbjct: 255 LLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVA 314
Query: 523 NILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDI--PEELKLRLAYREAA 580
N+ NEA ++ AR D I Q+ +A++R G G E T + PEE K +AY EA
Sbjct: 315 NVCNEAALIAARHLSDSINQKHFEQAIERVIG----GLEKKTQVLQPEEKKT-VAYHEAG 369
Query: 581 VAVLACHLPDPYRPIIETDIKSIRSQPNMRYAEI--SGRVFSRKNDYLNAIVRA----CA 634
AV +L + P+++ I I + YA+ + K L+ + C
Sbjct: 370 HAVAGWYL-EHADPLLKVSI--IPRGKGLGYAQYLPKEQYLYTKEQLLDRMCMTPGWPCG 426
Query: 635 PRVIEEQMFG-IDNMCWISSKATLDA-SRLAEF-LILQTGMTAFGKAYYRNQSDLV---P 688
PR + FG I K T A +++ +F + + G +F Q D+V P
Sbjct: 427 PR---KSSFGRITTGAQDDRKVTQSAYAQIVQFGMNEKVGQISFDLP---RQGDMVLEKP 480
Query: 689 NLATKLEALRDEY---MRFAVEKCASVLREYHSAVETITDILLEK 730
+ DE + A ++ ++L E + VE + +LLEK
Sbjct: 481 YSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEK 525
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 650 (233.9 bits), Expect = 7.7e-66, Sum P(2) = 7.7e-66
Identities = 174/477 (36%), Positives = 258/477 (54%)
Query: 282 RALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKG 341
+ SL KS++K + A TT TF D AG + K E+ E V LK+ ++ G PKG
Sbjct: 332 KGASSLFKSKSKAVKATSTT--TFKDVAGMDEAKEEIMEFVSFLKDPSRYKKLGARIPKG 389
Query: 342 VLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSI 401
+L GPPGTGKTLLAKA AGEAGV F+ +G+DF+EMFVGV SRV+DLF AR+ P I
Sbjct: 390 AILSGPPGTGKTLLAKATAGEAGVNFYTISGSDFIEMFVGVGPSRVRDLFKEARANTPCI 449
Query: 402 IFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDP 461
+FIDEIDA+G R G ERE L Q+L EMDGF STS V+V TNR D+LDP
Sbjct: 450 VFIDEIDAVGRARSRG--GFHNDERENTLNQLLVEMDGFS-STSGVVVFAGTNRSDVLDP 506
Query: 462 ALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAEL 521
ALLR GRFD+ + VG P GR I VH +N + + E + + +++A LT F+GA++
Sbjct: 507 ALLRPGRFDRQIYVGKPDIKGRKDIFMVHLKN--IKLDGEMEEIAKKLATLTPGFSGADI 564
Query: 522 QNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAV 581
N+ NE ++ ARKD + EA++R + +E+ PEE + +A+ EA
Sbjct: 565 ANVCNEGALVAARKDATSANFDHFEEAIERVLVGLK--RENRVLSPEERTI-VAHHEAGH 621
Query: 582 AVLACHLPDPYRPIIETDIKSIRSQPNMRYAEISGR---VFSRKNDYLNAIVRACAPRVI 638
AV+ L + P+++ I R + +A+ + +++R+ + + I + R+
Sbjct: 622 AVVGWFL-EHTDPLLKVSIVP-RGSGTLGFAQYQPKDQYLYTREQLF-DRICVSLGGRIA 678
Query: 639 EEQMFGIDNMCWISSKATLD-ASRLAEFLILQTGMTA-FGKAYYRNQSDLV----PNLAT 692
E +F D + + LD +++A ++ GM+ G A +R + D + P
Sbjct: 679 ESIIF--DRIS-TGAMDDLDKVTKMASASVVNYGMSEKVGVASFRKEGDDITVVKPYSQA 735
Query: 693 KLEALRDEYMRF---AVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
+ +E R A K +L E + + ILLEK I+ +++ I P
Sbjct: 736 TARMIDEEIRRMVNDAYSKTTQLLHEKKELLIKLATILLEKEVIQRDDLRTILGPRP 792
Score = 38 (18.4 bits), Expect = 7.7e-66, Sum P(2) = 7.7e-66
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 80 EKLKEAERQRINKLEELDRKANVQLERQ 107
E KE E +++ +E D K + E +
Sbjct: 129 ENKKENENEKVKDEKEKDEKEKEEKEEE 156
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 183/480 (38%), Positives = 265/480 (55%)
Query: 284 LGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVL 343
L S+G++ AK + + V F D AG E K E+ E V LKN +++Q+ G PKG +
Sbjct: 280 LFSVGETTAKIL--KNNIDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAM 337
Query: 344 LHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIF 403
L GPPGTGKTLLAKA AGEA VPF NG++F+EMFVGV +RV+D+FA AR AP I+F
Sbjct: 338 LTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILF 397
Query: 404 IDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPAL 463
IDEIDAIG KRG +GG +E+E L Q+L EMDGF ST+ V+V+ TNR DILDPAL
Sbjct: 398 IDEIDAIGRKRGRGHLGGQ-SEQENTLNQMLVEMDGFNSSTN-VVVLAGTNRPDILDPAL 455
Query: 464 LRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQN 523
R GRFD+ + +G P GR +I KVH R KD L +++A LT FTGA++ N
Sbjct: 456 TRPGRFDRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISN 515
Query: 524 ILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDI--PEELKLRLAYREAAV 581
+ NEA ++ AR + + +A++R G G E T + P E K +AY EA
Sbjct: 516 VCNEAALIAARHLSPSVQERHFEQAIERVIG----GLEKKTQVLQPSE-KTTVAYHEAGH 570
Query: 582 AVLACHLPDPYRPIIETDIKSIRSQPNMRYAEISGR---VFSRKNDYLNAIVRACAPRVI 638
AV+ L + P+++ I I + YA+ R +++R+ + + + RV
Sbjct: 571 AVVGWFL-EHADPLLKVSI--IPRGKGLGYAQYLPREQFLYTREQLF-DRMCMMLGGRVA 626
Query: 639 EEQMFGIDNMCWISSKATLDASRLAEFL---ILQTGMTA-FGKAYY---RNQSDLVPNLA 691
E+ FG I++ A D ++ + I+Q GM+ G+ + R +V
Sbjct: 627 EQLFFG-----QITTGAQDDLRKVTQSAYAQIVQFGMSEKLGQVSFDFPRQGETMVEKPY 681
Query: 692 TKLEA-LRDE----YMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
++ A L DE +R A + +L + VE + LLEK ++ ++ ++ P
Sbjct: 682 SEATAQLIDEEVRCLVRSAYNRTLELLTQCREQVEKVGRRLLEKEVLEKADMIELLGPRP 741
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
Identities = 159/368 (43%), Positives = 223/368 (60%)
Query: 284 LGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVL 343
L +G++ AK I ++ GV F D AG E K E+ E V LKN +++Q+ G PKG L
Sbjct: 283 LFGIGETIAKII--KDDIGVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAL 340
Query: 344 LHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIF 403
L GPPGTGKTLLAKA AGEAGVPF NG++F+EMFVGV +RV+D+FA AR AP I+F
Sbjct: 341 LTGPPGTGKTLLAKATAGEAGVPFITVNGSEFLEMFVGVGPARVRDMFALARKNAPCILF 400
Query: 404 IDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPAL 463
+DEIDAIG KRG GG +E+E L Q+L EMDGF ST+ V+V+ TNR D+LDPAL
Sbjct: 401 VDEIDAIGRKRGRGHFGGQ-SEQENTLNQLLVEMDGFN-STTNVVVLAGTNRPDVLDPAL 458
Query: 464 LRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTG--AEL 521
+R GRFD+ + +G P GR +I +VH R KD L +++A LT FTG A++
Sbjct: 459 MRPGRFDRQIYIGPPDIKGRSSIFRVHLRPLKLDESLSKDALARKLAALTPGFTGSGADI 518
Query: 522 QNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDI--PEELKLRLAYREA 579
N+ NEA ++ AR +G++ +A++R G G E T + P E K+ +AY EA
Sbjct: 519 SNVCNEAALIAARHLNPSVGEKHFEQAIERVIG----GLEKKTQVLQPGE-KMTVAYHEA 573
Query: 580 AVAVLACHLPDPYRPIIETDIKSIRSQPNMRYAEISGR---VFSRKNDYLNAIVRACAPR 636
AV+ L + P+++ I + + YA+ R +++R+ + + + R
Sbjct: 574 GHAVVGWFL-EHADPLLKVSI--VPRGKGLGYAQCLPREQYLYTREQLF-DRMCAMLGGR 629
Query: 637 VIEEQMFG 644
V E+ FG
Sbjct: 630 VAEQLFFG 637
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
Identities = 182/480 (37%), Positives = 265/480 (55%)
Query: 284 LGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVL 343
L S+G++ AK + + V F D AG E K E+ E V LKN +++Q+ G PKG +
Sbjct: 252 LFSVGETTAKIL--KNNIDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAM 309
Query: 344 LHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIF 403
L GPPGTGKTLLAKA AGEA VPF NG++F+EMFVGV +RV+D+FA AR AP I+F
Sbjct: 310 LTGPPGTGKTLLAKATAGEAKVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILF 369
Query: 404 IDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPAL 463
IDEIDAIG KRG +GG +E+E L Q+L EMDGF ST+ V+V+ TNR DILDPAL
Sbjct: 370 IDEIDAIGRKRGRGHLGGQ-SEQENTLNQMLVEMDGFN-STTNVVVLAGTNRPDILDPAL 427
Query: 464 LRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQN 523
R GRFD+ + +G P GR +I KVH R +D L +++A LT FTGA++ N
Sbjct: 428 TRPGRFDRQIYIGPPDIKGRSSIFKVHLRPLKLDESLTRDALSRKLAALTPGFTGADISN 487
Query: 524 ILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDI--PEELKLRLAYREAAV 581
+ NEA ++ AR + + +A++R G G E T + P E K +AY EA
Sbjct: 488 VCNEAALIAARHLSPSVQERHFEQAIERVIG----GLEKKTQVLQPSE-KTTVAYHEAGH 542
Query: 582 AVLACHLPDPYRPIIETDIKSIRSQPNMRYAEISGR---VFSRKNDYLNAIVRACAPRVI 638
AV+ L + P+++ I I + YA+ R +++R+ + + + RV
Sbjct: 543 AVVGWFL-EHADPLLKVSI--IPRGKGLGYAQYLPREQYLYTREQLF-DRMCMMLGGRVA 598
Query: 639 EEQMFGIDNMCWISSKATLDASRLAEFL---ILQTGMTA-FGKAYY---RNQSDLVPNLA 691
E+ FG I++ A D ++ + I+Q GM+ G+ + R +V
Sbjct: 599 EQLFFG-----QITTGAQDDLRKVTQSAYAQIVQFGMSEKLGQVSFDFPRQGETMVEKPY 653
Query: 692 TKLEA-LRDE----YMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
++ A L DE +R A + +L + VE + LLEK ++ ++ ++ P
Sbjct: 654 SEATAQLIDEEVRCLVRSAYNRTLELLTQCREQVEKVGRRLLEKEVLEKADMIELLGPRP 713
>FB|FBgn0036702 [details] [associations]
symbol:CG6512 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046331
"lateral inhibition" evidence=IMP] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AE014296
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0030163 GO:GO:0046331
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OMA:YSEDTAM HSSP:Q9LCZ4 UniGene:Dm.986 GeneID:39922
KEGG:dme:Dmel_CG6512 FlyBase:FBgn0036702 GenomeRNAi:39922
NextBio:816090 EMBL:AY084199 RefSeq:NP_730248.2 SMR:Q8T4G5
IntAct:Q8T4G5 MINT:MINT-1004758 STRING:Q8T4G5
EnsemblMetazoa:FBtr0075251 UCSC:CG6512-RA InParanoid:Q8T4G5
Uniprot:Q8T4G5
Length = 826
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 178/480 (37%), Positives = 258/480 (53%)
Query: 285 GSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLL 344
G + +S AK + E GV F D AG E K E+ E V LKN +++ + G PKG +L
Sbjct: 308 GGVMQSTAKLTNPNEI-GVGFKDVAGCEEAKIEIMEFVNFLKNPQQYIDLGAKIPKGAML 366
Query: 345 HGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFI 404
GPPGTGKTLLAKA AGEA VPF +G++F+EMFVGV SRV+D+FA AR AP I+FI
Sbjct: 367 TGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFI 426
Query: 405 DEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALL 464
DEIDA+G KRGG GG +E+E L Q+L EMDGF +T+ V+V+ ATNR+DILD AL+
Sbjct: 427 DEIDAVGRKRGGKTFGGH-SEQENTLNQLLVEMDGFNTTTN-VVVLAATNRVDILDKALM 484
Query: 465 RKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNI 524
R GRFD+ + V P GR +I KVH N ++ +K+ L +++A LT FTGA++ N+
Sbjct: 485 RPGRFDRQIYVPAPDIKGRASIFKVHLGN--LKTSLDKNELSRKMAALTPGFTGADIANV 542
Query: 525 LNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDI--PEELKLRLAYREAAVA 582
NEA ++ AR D I + +A++R G E T++ PEE K +A+ EA A
Sbjct: 543 CNEAALIAARDSKDSIVLKHFEQAIER----VIAGMEKKTNVLAPEE-KRTVAHHEAGHA 597
Query: 583 VLACHLPDPYRPIIETDIKSIRSQPNMRYAEI--SGRVFSRKNDYLNAIVRACAPRVIEE 640
V L + P+++ I I + YA+ K + + RV EE
Sbjct: 598 VAGWFL-EHADPLLKVSI--IPRGKGLGYAQYLPKDHYLLSKEQLFDRMCMTLGGRVAEE 654
Query: 641 QMF-----GI-DNMCWISSKATLDASRLA--------EFLILQTGMTAFGKAYYRNQSDL 686
F G D++ I+ A R F + Q G F K Y + + L
Sbjct: 655 LFFNRITTGAQDDLKKITDIAYSQVVRFGMNEKVGQVSFDVGQAGDPVFSKPYSEDTAQL 714
Query: 687 VPNLATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
+ N + ++ A E S+L ++ V+ + + LL+ + +++ ++ P
Sbjct: 715 IDNEVRSI-------IKCAHEATTSLLTKHKENVQKVAERLLQNEVLSRDDMIELLGPRP 767
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 633 (227.9 bits), Expect = 8.7e-65, Sum P(2) = 8.7e-65
Identities = 152/326 (46%), Positives = 199/326 (61%)
Query: 259 IYAKLIPCDLGTPPQKTRQPLQRRALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKREL 318
+ A LI + T Q L+ R G G K ET +TF D AG + K EL
Sbjct: 283 VLAGLIRFPVSFSTSSTGQ-LRTRKAG--GPDGGKVSGGGET--ITFADVAGVDEAKEEL 337
Query: 319 QEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEM 378
+EIV L+N E++ G P+GVLL G PGTGKTLLAKA+AGEA VPF + + ++FVE+
Sbjct: 338 EEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVEL 397
Query: 379 FVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMD 438
+VG+ ASRV+DLFA A+ APSIIFIDEIDA+ R G G EREQ L Q+LTEMD
Sbjct: 398 YVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMGSNDEREQTLNQLLTEMD 457
Query: 439 GFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRS 498
GF S S V+V+GATNR D+LDPAL R GRFD++V V P K GR +IL+VH K
Sbjct: 458 GFD-SNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRESILRVHVSKKELPL 516
Query: 499 EEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIGQEELLEALKRQKGTFET 558
+ DV L IA +T FTGA+L N++NEA +L RK+ + + + ++A++R E
Sbjct: 517 GD--DVNLGSIASMTTGFTGADLANLVNEAALLAGRKNKTNVEKIDFIQAVERSIAGIE- 573
Query: 559 GQEDSTDIPEELKLRLAYREAAVAVL 584
+ S + K +A EA AV+
Sbjct: 574 --KKSARLKGNEKAVVARHEAGHAVV 597
Score = 45 (20.9 bits), Expect = 8.7e-65, Sum P(2) = 8.7e-65
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 138 IDFSDFWKLLNSNSVQYMEYSNYGQTVSVILPYYKDAKVEGKE 180
+ +S+F +NSN VQ +E V V+ D K + E
Sbjct: 177 VPYSEFLSKVNSNQVQKVEVDG----VQVLFKLRDDGKWQESE 215
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 176/478 (36%), Positives = 259/478 (54%)
Query: 284 LGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVL 343
LG +G S+ K +++E+ V F D AG E K E++EIV LK E + G PKG+L
Sbjct: 159 LG-IGSSK-KLVNSEKPK-VKFSDVAGVEEAKEEVKEIVDFLKYPERYIKLGAKIPKGLL 215
Query: 344 LHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIF 403
L GPPGTGKTLLAKA+AGEA VPFF+ +G+ F+EMFVGV ASRV+DLF +A+ AP+I+F
Sbjct: 216 LVGPPGTGKTLLAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVF 275
Query: 404 IDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPAL 463
IDEIDAIG R + GG EREQ L Q+L EMDGF +S V+V+ ATNR ++LD AL
Sbjct: 276 IDEIDAIGKSRAASGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAAL 335
Query: 464 LRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQN 523
LR GRFD+ V V P GR ILKVH ++ + V +++IA LT GA+L N
Sbjct: 336 LRPGRFDRQVLVDKPDFKGRCDILKVHMKDVKISPK----VKVEDIARLTAGLAGADLAN 391
Query: 524 ILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAV 583
I+NEA +L R Y+ Q +L+EA++R E + S I E+ K + Y E A+
Sbjct: 392 IINEAALLAGRDSKKYVEQNDLVEAVERAIAGLE---KKSRRINEKEKKIVTYHECGHAL 448
Query: 584 LACHLPDPYRPIIETDI--KSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQ 641
+A R + + + + + + + +K++ + + R EE
Sbjct: 449 IAETTKGAKR-VSKVSVIPRGLAALGYTLNTPEENKFLMQKHELIAEVDVLLGGRAAEEV 507
Query: 642 MFGIDNMCWISSKATLDASRLAEFL---ILQTGMTAF-GKAYYRNQSDL-------VPNL 690
G IS+ A+ D R + + I GM+ G Q + + +
Sbjct: 508 FIGE-----ISTGASNDLERATDIIKAMISMYGMSEIAGLMVLEKQRNTFLSGGQTIKDY 562
Query: 691 ATKLEALRDEYMRFAVEK----CASVLREYHSAVETITDILLEKGEIKAEEIWDIYKK 744
+ K+ D+Y++ +++ L Y A+ET+ L E+ I+ ++ +I K+
Sbjct: 563 SEKMAESLDDYVKKTLDERYKDVKDTLNTYKGAIETMVAALYEEETIEGNKVREIIKE 620
>TAIR|locus:2025052 [details] [associations]
symbol:ftsh10 "FTSH protease 10" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
EMBL:AC022464 ProtClustDB:CLSN2692039 EMBL:AY064138 EMBL:AY124808
EMBL:AK230173 IPI:IPI00520253 PIR:H86209 RefSeq:NP_172231.2
UniGene:At.23339 ProteinModelPortal:Q8VZI8 SMR:Q8VZI8 STRING:Q8VZI8
MEROPS:M41.023 PaxDb:Q8VZI8 PRIDE:Q8VZI8 EnsemblPlants:AT1G07510.1
GeneID:837265 KEGG:ath:AT1G07510 GeneFarm:2535 GeneFarm:2675
TAIR:At1g07510 InParanoid:Q8VZI8 OMA:YSEDTAM PhylomeDB:Q8VZI8
Genevestigator:Q8VZI8 Uniprot:Q8VZI8
Length = 813
Score = 621 (223.7 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 161/477 (33%), Positives = 248/477 (51%)
Query: 282 RALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKG 341
R + ++GK++ + F D AG E K+E+ E V L+N +++++ G PKG
Sbjct: 303 RGIFNIGKAQITRADKNSKNKIYFKDVAGCEEAKQEIMEFVHFLQNPKKYEDLGAKIPKG 362
Query: 342 VLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSI 401
LL GPPGTGKTLLAKA AGE+ VPF + +G+DF+EMFVGV SRV++LF AR APSI
Sbjct: 363 ALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSI 422
Query: 402 IFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDP 461
IFIDEIDAIG RG GG ERE L Q+L EMDGF +T+ V+V+ TNR DILD
Sbjct: 423 IFIDEIDAIGRARGRGGFSGGNDERESTLNQLLVEMDGFG-TTAGVVVLAGTNRPDILDK 481
Query: 462 ALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAEL 521
ALLR GRFD+ + + P GR I +++ K + + E Q +A LT F GA++
Sbjct: 482 ALLRPGRFDRQITIDKPDIKGRDQIFQIYL--KKIKLDHEPSYYSQRLAALTPGFAGADI 539
Query: 522 QNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLR-LAYREAA 580
N+ NEA ++ AR + + A+ R G G E + +L+ R +AY E+
Sbjct: 540 ANVCNEAALIAARHEGATVTMAHFDSAIDRVIG----GLEKKNRVISKLERRTVAYHESG 595
Query: 581 VAVLACHLPDPYRPIIETDIKSIRSQPNMRYAEI--SGRVFSRKNDYLNAIVRACAPRVI 638
AV L + P+++ I R + +A+ + + K + R
Sbjct: 596 HAVAGWFL-EHAEPLLKVTIVP-RGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAA 653
Query: 639 EEQMFGIDNMCWISSKATLDASRLAEFLILQTGMTAFGK-----AYYRNQSDLVPNLATK 693
E+ + G IS+ A D ++ + Q + F ++ + + + + +
Sbjct: 654 EQVLIGR-----ISTGAQNDLEKVTKMTYAQVAVYGFSDKIGLLSFPQREDEFSKPYSNR 708
Query: 694 LEALRDEYMRF----AVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
A+ DE +R A ++ ++ E+ V I ++LLEK + +++ + + P
Sbjct: 709 TGAMIDEEVREWVGKAYKRTVELIEEHKEQVAQIAELLLEKEVLHQDDLTKVLGERP 765
Score = 52 (23.4 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 284 LGSLGKSRAKFISAEETTGVTFDDFAGQEYIKREL--QEIVR 323
+GS+ K A+E GV DF Y+ + QE++R
Sbjct: 228 IGSVESFEEKLEEAQEAIGVNSHDFVPVTYVSETIWYQELLR 269
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 176/471 (37%), Positives = 256/471 (54%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
++GKSRAK + E ++F + AG + K+E+ E V LKN ++ G P+G +L
Sbjct: 268 NVGKSRAKLFNKETDIKISFKNVAGCDEAKQEIMEFVHFLKNPGKYTKLGAKIPRGAILS 327
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKA AGEA VPF + +G++FVEMFVGV ASRV+DLF ARS APSIIFID
Sbjct: 328 GPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFID 387
Query: 406 EIDAIGSKRG-GPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALL 464
EIDAIG +RG G +GG ERE L Q+L EMDGF S QV+V+ TNR D+LD AL+
Sbjct: 388 EIDAIGKERGKGGALGGANDEREATLNQLLVEMDGFTTS-DQVVVLAGTNRPDVLDNALM 446
Query: 465 RKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRS--EEEKDVLLQEIAELTEDFTGAELQ 522
R GRFD+ +++ P +GR I VH + ++ + L ++A LT FTGA++
Sbjct: 447 RPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIA 506
Query: 523 NILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDI-PEELKLRLAYREAAV 581
N NEA ++ AR + YI +A++R G E T + +E K +AY EA
Sbjct: 507 NACNEAALIAARHNDPYITIHHFEQAIER----VIAGLEKKTRVLSKEEKRSVAYHEAGH 562
Query: 582 AVLACHLPDPYR-PIIETDIKSIRSQPNMRYAEI--SGRVFSRKNDYLNAIVRACAPRVI 638
AV L Y P+++ I R Q + YA+ + + + + ++ A RV
Sbjct: 563 AVCGWFLK--YADPLLKVSIIP-RGQGALGYAQYLPPDQYLISEEQFRHRMIMALGGRVS 619
Query: 639 EEQMFGIDNMCWISSKATLD---ASRLAEFLILQTGMTA-FGK-AYYRNQSDLVPN--LA 691
EE F ++S A D +++A ++ GM+ G ++ +N + N +
Sbjct: 620 EELHFPS-----VTSGAHDDFKKVTQMANAMVTSLGMSPKIGYLSFDQNDGNFKVNKPFS 674
Query: 692 TKLEALRDEYMRFAVEK----CASVLREYHSAVETITDILLEKGEIKAEEI 738
K D ++ V+ C +L + V+ + LL K I E++
Sbjct: 675 NKTARTIDLEVKSIVDDAHRACTELLTKNLDKVDLVAKELLRKEAITREDM 725
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 623 (224.4 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 169/479 (35%), Positives = 249/479 (51%)
Query: 282 RALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKG 341
R + ++GK+ + F D AG + K+E+ E V LKN +++++ G PKG
Sbjct: 298 RGIFNIGKATITRADKHSKNKIYFKDVAGCDEAKQEIMEFVHFLKNPKKYEDLGAKIPKG 357
Query: 342 VLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSI 401
LL GPPGTGKTLLAKA AGE+GVPF + +G+DF+EMFVGV SRV+ LF AR APSI
Sbjct: 358 ALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSI 417
Query: 402 IFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDP 461
IFIDEIDAIG RG +GG ERE L Q+L EMDGF +T+ V+V+ TNR DILD
Sbjct: 418 IFIDEIDAIGRARGRGGLGGND-ERESTLNQLLVEMDGFG-TTAGVVVLAGTNRPDILDK 475
Query: 462 ALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAEL 521
ALLR GRFD+ + + P GR I K++ K + + E Q +A LT F GA++
Sbjct: 476 ALLRPGRFDRQITIDKPDIKGRDQIFKIYL--KKIKLDHEPSYYSQRLAALTPGFAGADI 533
Query: 522 QNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLR-LAYREAA 580
N+ NEA ++ AR + + A+ R G G E + +L+ R +AY E+
Sbjct: 534 ANVCNEAALIAARHEGATVTMAHFESAIDRVIG----GLEKKNRVISKLERRTVAYHESG 589
Query: 581 VAVLACHLPDPYRPIIETDIKSIRSQPNMRYAEI--SGRVFSRKNDYLNAIVRACAPRVI 638
AV+ L + P+++ I R + +A+ + + K + R
Sbjct: 590 HAVVGWFL-EHAEPLLKVTIVP-RGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAA 647
Query: 639 EEQMFGIDNMCWISSKATLDASRLAEFLILQTGMTAF----GKAYY--RNQS-DLVPNLA 691
E+ + G IS+ A D ++ + Q + F G + R+ D +
Sbjct: 648 EQVLIGK-----ISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPPRDDGYDFSKPYS 702
Query: 692 TKLEALRDEYMRF----AVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
K A+ DE +R A E+ ++ E+ V I ++LLEK + +++ I + P
Sbjct: 703 NKTGAIIDEEVRDWVAKAYERTVELVEEHKVKVAEIAELLLEKEVLHQDDLLKILGERP 761
Score = 40 (19.1 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 284 LGSLGKSRAKFISAEETTGVTFDDFAGQEYIKREL--QEIVR 323
+GS+ K A+E GV ++ Y+ + QE +R
Sbjct: 224 IGSVDSFEEKLEEAQEALGVDRHEYVPVTYVSEMVWYQEFMR 265
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 621 (223.7 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 146/312 (46%), Positives = 193/312 (61%)
Query: 273 QKTRQPLQRRALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQ 332
Q T L+ R G G + +S + T +TF D AG + K EL+EIV LKN + +
Sbjct: 300 QSTTGQLRTRKSGGPGGGK---VSGDGET-ITFADVAGVDEAKEELEEIVEFLKNPDRYV 355
Query: 333 NKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFA 392
G P+GVLL G PGTGKTLLAKA+AGE+ VPF + + ++FVE++VG+ ASRV+DLFA
Sbjct: 356 RLGARPPRGVLLVGLPGTGKTLLAKAVAGESDVPFISCSASEFVELYVGMGASRVRDLFA 415
Query: 393 SARSFAPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGA 452
A+ APSIIFIDEIDA+ R G EREQ L Q+LTEMDGF S+S V+V+GA
Sbjct: 416 RAKKEAPSIIFIDEIDAVAKSRDGKFRMVSNDEREQTLNQLLTEMDGFD-SSSAVIVLGA 474
Query: 453 TNRLDILDPALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAEL 512
TNR D+LDPAL R GRFD++V V P K GR +ILKVH K + DV L IA +
Sbjct: 475 TNRADVLDPALRRPGRFDRVVTVESPDKVGRESILKVHVSKKELPLGD--DVNLASIASM 532
Query: 513 TEDFTGAELQNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKL 572
T FTGA+L N++NEA +L RK + + + + A++R E + + + K
Sbjct: 533 TTGFTGADLANLVNEAALLAGRKSKMTVDKIDFIHAVERSIAGIE---KKTARLKGSEKA 589
Query: 573 RLAYREAAVAVL 584
+A EA AV+
Sbjct: 590 VVARHEAGHAVV 601
Score = 42 (19.8 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 125 LKGTELDPENSHR-IDFSDFWKLLNSNSVQYMEYSNY 160
L G+E + + + +SDF +N++ VQ +E +
Sbjct: 162 LPGSEPRTQTTFMSVPYSDFLSKVNNDEVQKVEVDGF 198
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 177/456 (38%), Positives = 258/456 (56%)
Query: 303 VTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGE 362
+ F++ AG + K EL E+V +KN E++ G PKGVLL GPPG+GKT+LA+A+A E
Sbjct: 146 IRFEEIAGIDESKLELLEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATE 205
Query: 363 AGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGG 422
A VP+ +G +F+E++VG A R++ LFA ARS APSI+FIDEIDAIG KR + G
Sbjct: 206 ANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGA 265
Query: 423 GA-EREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKD 481
G E +Q L Q+L EMDGF +T ++VIGATNR+D LD ALLR GRFD+IV V LP +
Sbjct: 266 GQREHDQTLNQLLVEMDGFS-NTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDIN 324
Query: 482 GRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIG 541
GR IL+++ K +S+ + + + ++IA LT F+GA+L+N++NEA IL R + +
Sbjct: 325 GRKKILEIYI--KKIKSDLKLEDI-EKIARLTPGFSGADLENVVNEATILATRNNKSLVT 381
Query: 542 QEELLEALKRQKGTFETGQEDSTDIPEELKLRL-AYREAAVAVLACHLPDPYRPIIETDI 600
EL EA R K + G E + + + R+ AY EA A++A L PI + I
Sbjct: 382 INELYEA--RDKVSM--GPERKSLRQSDHQRRITAYHEAGHAIVAYFLQPKTDPIHKATI 437
Query: 601 KSIRSQPNMRYAEISGRVFSRKNDY---LNAIVRAC-APRVIEEQMFGIDNMCWISSKAT 656
S R + Y E V R N + + A + C R EE +FG SS A+
Sbjct: 438 IS-RGNA-LGYVE-QIPVDDRHNYFKSQMEAKLAVCMGGRTAEEIVFGKSET---SSGAS 491
Query: 657 LDASRLAEF---LILQTGMT-AFGKAYYRNQ--SDLVPN-LATKLEALRDEYMRFAVEKC 709
D SR E ++ + GM+ G Y+ + N L+ + + + ++ VEK
Sbjct: 492 SDISRATEIAYKMVTEWGMSDKLGPLNYKKRMGDGYSSNRLSAQTVSSIEVEVKSLVEKG 551
Query: 710 AS----VLREYHSAVETITDILLEKGEIKAEEIWDI 741
S +LR + ++ + LL+K + EEI +I
Sbjct: 552 KSLSEEILRRHRKELDNLAFALLDKETLSGEEIKNI 587
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 177/456 (38%), Positives = 258/456 (56%)
Query: 303 VTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGE 362
+ F++ AG + K EL E+V +KN E++ G PKGVLL GPPG+GKT+LA+A+A E
Sbjct: 146 IRFEEIAGIDESKLELLEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATE 205
Query: 363 AGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGG 422
A VP+ +G +F+E++VG A R++ LFA ARS APSI+FIDEIDAIG KR + G
Sbjct: 206 ANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGA 265
Query: 423 GA-EREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKD 481
G E +Q L Q+L EMDGF +T ++VIGATNR+D LD ALLR GRFD+IV V LP +
Sbjct: 266 GQREHDQTLNQLLVEMDGFS-NTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDIN 324
Query: 482 GRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIG 541
GR IL+++ K +S+ + + + ++IA LT F+GA+L+N++NEA IL R + +
Sbjct: 325 GRKKILEIYI--KKIKSDLKLEDI-EKIARLTPGFSGADLENVVNEATILATRNNKSLVT 381
Query: 542 QEELLEALKRQKGTFETGQEDSTDIPEELKLRL-AYREAAVAVLACHLPDPYRPIIETDI 600
EL EA R K + G E + + + R+ AY EA A++A L PI + I
Sbjct: 382 INELYEA--RDKVSM--GPERKSLRQSDHQRRITAYHEAGHAIVAYFLQPKTDPIHKATI 437
Query: 601 KSIRSQPNMRYAEISGRVFSRKNDY---LNAIVRAC-APRVIEEQMFGIDNMCWISSKAT 656
S R + Y E V R N + + A + C R EE +FG SS A+
Sbjct: 438 IS-RGNA-LGYVE-QIPVDDRHNYFKSQMEAKLAVCMGGRTAEEIVFGKSET---SSGAS 491
Query: 657 LDASRLAEF---LILQTGMT-AFGKAYYRNQ--SDLVPN-LATKLEALRDEYMRFAVEKC 709
D SR E ++ + GM+ G Y+ + N L+ + + + ++ VEK
Sbjct: 492 SDISRATEIAYKMVTEWGMSDKLGPLNYKKRMGDGYSSNRLSAQTVSSIEVEVKSLVEKG 551
Query: 710 AS----VLREYHSAVETITDILLEKGEIKAEEIWDI 741
S +LR + ++ + LL+K + EEI +I
Sbjct: 552 KSLSEEILRRHRKELDNLAFALLDKETLSGEEIKNI 587
>TAIR|locus:2094892 [details] [associations]
symbol:EMB2083 "embryo defective 2083" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AB023046
eggNOG:COG0465 GO:GO:0017111 IPI:IPI00526963 RefSeq:NP_566541.1
UniGene:At.38918 ProteinModelPortal:A8MPR5 SMR:A8MPR5 STRING:A8MPR5
PaxDb:A8MPR5 PRIDE:A8MPR5 EnsemblPlants:AT3G16290.1 GeneID:820876
KEGG:ath:AT3G16290 TAIR:At3g16290 HOGENOM:HOG000015086
InParanoid:A8MPR5 OMA:FFTHGEM PhylomeDB:A8MPR5
ProtClustDB:CLSN2688442 Genevestigator:A8MPR5 Uniprot:A8MPR5
Length = 876
Score = 616 (221.9 bits), Expect = 1.6e-62, Sum P(2) = 1.6e-62
Identities = 165/469 (35%), Positives = 261/469 (55%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAK 357
E V F D AG I+ EL+EIV+ + E ++ +G+ P G+LL GPPG GKTLLAK
Sbjct: 402 ERGVDVKFTDVAGLGKIRLELEEIVKFFTHGEMYRRRGVKIPGGILLCGPPGVGKTLLAK 461
Query: 358 AIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGP 417
A+AGEAGV FF+ + + FVE++VGV ASRV+ L+ AR APS++FIDE+DA+G +RG
Sbjct: 462 AVAGEAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAVGRERGLI 521
Query: 418 DIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGL 477
G GG ER+ L Q+L +DGF+ +V+ I +TNR DILDPAL+R GRFD+ + +
Sbjct: 522 K-GSGGQERDATLNQLLVSLDGFE-GRGEVITIASTNRPDILDPALVRPGRFDRKIFIPK 579
Query: 478 PSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDL 537
P GR IL+VHAR K E+ D + +A +T+ GAEL NI+ A I R
Sbjct: 580 PGLIGRMEILQVHARKKPMA--EDLDYMA--VASMTDGMVGAELANIVEIAAINMMRDGR 635
Query: 538 DYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLACHLPD------- 590
+ ++LL+A + + E G D D E ++A EAA+AV+A + PD
Sbjct: 636 TELTTDDLLQAAQIE----ERGMLDRKDRSLETWRQVAINEAAMAVVAVNFPDMKNIEFL 691
Query: 591 PYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMFGIDNMCW 650
P ++ +R + M + + + SR++ L+ I APR +E +G D +
Sbjct: 692 TINPRAGRELGYVRVK--MDHIKFKEGMLSRQS-ILDHITVQLAPRAADELWYGEDQLST 748
Query: 651 ISSKATLDASRLAEFLILQTGMTAFGKAYYRNQ---SDLVPNLATKLEALRDEYMRFAVE 707
I ++ + +A A L+L G++ K + N +D + ++ +EALR + E
Sbjct: 749 IWAETSDNARSAARSLVLG-GLS--DKHHGLNNFWVADRINDI--DVEALR--ILNMCYE 801
Query: 708 KCASVLREYHSAVETITDILLEKGEIKAEEIW---DIYKKAPQIPQPAV 753
+ +L + ++ + + L++K + +E + ++Y + +P P++
Sbjct: 802 RAKEILGRNRTLMDEVVEKLVQKKSLTKQEFFTLVELYGSSKPMP-PSI 849
Score = 42 (19.8 bits), Expect = 1.6e-62, Sum P(2) = 1.6e-62
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 80 EKLKEAERQRINKLEELDRKANVQLERQL 108
+K +R +I K E +RK +LER++
Sbjct: 327 QKKDYEDRLKIEKAEADERKKMRELEREM 355
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 601 (216.6 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
Identities = 157/421 (37%), Positives = 228/421 (54%)
Query: 287 LGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHG 346
+GKS+AK + E + F D AG + K E+ E V+ L++ +++ G P+G +L G
Sbjct: 268 IGKSKAKLFNQENEVKIKFKDVAGCDESKEEIMEFVKFLQDPHKYEKLGAKIPRGAILSG 327
Query: 347 PPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDE 406
PPGTGKTLLAKA AGEAGVPF + +G++FVEMFVGV ASRV+DLF +AR AP+IIF+DE
Sbjct: 328 PPGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDE 387
Query: 407 IDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRK 466
IDAIG +RG +GG ERE L Q+L EMDGF +T V+V+ TNR DILD ALLR
Sbjct: 388 IDAIGKERGNGRMGGND-ERENTLNQLLVEMDGFD-TTDHVVVLAGTNRPDILDKALLRP 445
Query: 467 GRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIA-ELTEDFTGAELQNIL 525
GRFD+ + + +P +GR I KVH +S ++ D +++ + E++ +
Sbjct: 446 GRFDRHISIDVPDVEGRKQIFKVHLNKLKLKSVQDIDAKQKDVDFSKYQQLKNEEIEKLA 505
Query: 526 NEAGILT---ARKDLDYIGQEELLEALKRQKGTFET------------GQEDSTDI--PE 568
LT A D+ E L A + +T G E + I PE
Sbjct: 506 GRLAALTPGFAGADIANCCNEGALIAAREDAPAVDTYHFEQAIERVIAGLEKKSRILSPE 565
Query: 569 ELKLRLAYREAAVAVLACHLPDPYR-PIIETDIKSIRSQPNMRYAEI--SGRVFSRKNDY 625
E K +AY EA A+ L Y P+++ I R Q + YA+ + + + +
Sbjct: 566 EKKT-VAYHEAGHAICGWFLQ--YADPLVKVSIIP-RGQGALGYAQYLPKDQYLTSQEQF 621
Query: 626 LNAIVRACAPRVIEEQMFGIDNMCWISSKATLDASRLAEFLILQTGMT-AFGKAYYRNQS 684
+ ++ RV EE F D + +S +++A+ +IL+ GM+ G+ Y S
Sbjct: 622 KHRMIMTLGGRVSEELHF--DTVTSGASDDFKKITQMAQQMILKLGMSDKLGQICYDTSS 679
Query: 685 D 685
D
Sbjct: 680 D 680
Score = 145 (56.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 66/269 (24%), Positives = 119/269 (44%)
Query: 493 NKYFR-SEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIGQEELLEALKR 551
+KY + EE + L +A LT F GA++ N NE ++ AR+D + +A++R
Sbjct: 491 SKYQQLKNEEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAVDTYHFEQAIER 550
Query: 552 QKGTFETGQEDSTDIPEELKLRLAYREAAVAVLACHLPDPYR-PIIETDIKSIRSQPNMR 610
E ++ PEE K +AY EA A+ L Y P+++ I R Q +
Sbjct: 551 VIAGLE--KKSRILSPEEKKT-VAYHEAGHAICGWFLQ--YADPLVKVSIIP-RGQGALG 604
Query: 611 YAEI--SGRVFSRKNDYLNAIVRACAPRVIEEQMFGIDNMCWISSKATLDASRLAEFLIL 668
YA+ + + + + + ++ RV EE F D + +S +++A+ +IL
Sbjct: 605 YAQYLPKDQYLTSQEQFKHRMIMTLGGRVSEELHF--DTVTSGASDDFKKITQMAQQMIL 662
Query: 669 QTGMT-AFGKAYYRNQSD------LVPNLATKLEALRDEYMRFAV----EKCASVLREYH 717
+ GM+ G+ Y SD + N + + DE ++ + E C +L E
Sbjct: 663 KLGMSDKLGQICYDTSSDNGNGFKVHHNYSETTARIIDEEVKRLIDESYEACHKLLTEKL 722
Query: 718 SAVETITDILLEKGEIKAEEIWDIYKKAP 746
V+ + + L +K + E++ I P
Sbjct: 723 DLVDKVAEELFKKEVLTREDMIKICGPRP 751
Score = 39 (18.8 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 12 ITFPKHFPSHFSRFNKHTFRT 32
+ + P HFS + FRT
Sbjct: 19 VLYRSAIPRHFSTYTPLAFRT 39
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 601 (216.6 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
Identities = 157/421 (37%), Positives = 228/421 (54%)
Query: 287 LGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHG 346
+GKS+AK + E + F D AG + K E+ E V+ L++ +++ G P+G +L G
Sbjct: 268 IGKSKAKLFNQENEVKIKFKDVAGCDESKEEIMEFVKFLQDPHKYEKLGAKIPRGAILSG 327
Query: 347 PPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDE 406
PPGTGKTLLAKA AGEAGVPF + +G++FVEMFVGV ASRV+DLF +AR AP+IIF+DE
Sbjct: 328 PPGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDE 387
Query: 407 IDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRK 466
IDAIG +RG +GG ERE L Q+L EMDGF +T V+V+ TNR DILD ALLR
Sbjct: 388 IDAIGKERGNGRMGGND-ERENTLNQLLVEMDGFD-TTDHVVVLAGTNRPDILDKALLRP 445
Query: 467 GRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIA-ELTEDFTGAELQNIL 525
GRFD+ + + +P +GR I KVH +S ++ D +++ + E++ +
Sbjct: 446 GRFDRHISIDVPDVEGRKQIFKVHLNKLKLKSVQDIDAKQKDVDFSKYQQLKNEEIEKLA 505
Query: 526 NEAGILT---ARKDLDYIGQEELLEALKRQKGTFET------------GQEDSTDI--PE 568
LT A D+ E L A + +T G E + I PE
Sbjct: 506 GRLAALTPGFAGADIANCCNEGALIAAREDAPAVDTYHFEQAIERVIAGLEKKSRILSPE 565
Query: 569 ELKLRLAYREAAVAVLACHLPDPYR-PIIETDIKSIRSQPNMRYAEI--SGRVFSRKNDY 625
E K +AY EA A+ L Y P+++ I R Q + YA+ + + + +
Sbjct: 566 EKKT-VAYHEAGHAICGWFLQ--YADPLVKVSIIP-RGQGALGYAQYLPKDQYLTSQEQF 621
Query: 626 LNAIVRACAPRVIEEQMFGIDNMCWISSKATLDASRLAEFLILQTGMT-AFGKAYYRNQS 684
+ ++ RV EE F D + +S +++A+ +IL+ GM+ G+ Y S
Sbjct: 622 KHRMIMTLGGRVSEELHF--DTVTSGASDDFKKITQMAQQMILKLGMSDKLGQICYDTSS 679
Query: 685 D 685
D
Sbjct: 680 D 680
Score = 145 (56.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 66/269 (24%), Positives = 119/269 (44%)
Query: 493 NKYFR-SEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIGQEELLEALKR 551
+KY + EE + L +A LT F GA++ N NE ++ AR+D + +A++R
Sbjct: 491 SKYQQLKNEEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAVDTYHFEQAIER 550
Query: 552 QKGTFETGQEDSTDIPEELKLRLAYREAAVAVLACHLPDPYR-PIIETDIKSIRSQPNMR 610
E ++ PEE K +AY EA A+ L Y P+++ I R Q +
Sbjct: 551 VIAGLE--KKSRILSPEEKKT-VAYHEAGHAICGWFLQ--YADPLVKVSIIP-RGQGALG 604
Query: 611 YAEI--SGRVFSRKNDYLNAIVRACAPRVIEEQMFGIDNMCWISSKATLDASRLAEFLIL 668
YA+ + + + + + ++ RV EE F D + +S +++A+ +IL
Sbjct: 605 YAQYLPKDQYLTSQEQFKHRMIMTLGGRVSEELHF--DTVTSGASDDFKKITQMAQQMIL 662
Query: 669 QTGMT-AFGKAYYRNQSD------LVPNLATKLEALRDEYMRFAV----EKCASVLREYH 717
+ GM+ G+ Y SD + N + + DE ++ + E C +L E
Sbjct: 663 KLGMSDKLGQICYDTSSDNGNGFKVHHNYSETTARIIDEEVKRLIDESYEACHKLLTEKL 722
Query: 718 SAVETITDILLEKGEIKAEEIWDIYKKAP 746
V+ + + L +K + E++ I P
Sbjct: 723 DLVDKVAEELFKKEVLTREDMIKICGPRP 751
Score = 39 (18.8 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 12 ITFPKHFPSHFSRFNKHTFRT 32
+ + P HFS + FRT
Sbjct: 19 VLYRSAIPRHFSTYTPLAFRT 39
>TAIR|locus:2076929 [details] [associations]
symbol:AT3G02450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011546 Pfam:PF00004 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AC021640
EMBL:CP002686 GO:GO:0051301 GO:GO:0008270 GO:GO:0009941
GO:GO:0004222 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY062811 EMBL:BT008384
IPI:IPI00524458 RefSeq:NP_186894.1 UniGene:At.27477
ProteinModelPortal:Q9M895 SMR:Q9M895 STRING:Q9M895 PRIDE:Q9M895
EnsemblPlants:AT3G02450.1 GeneID:821139 KEGG:ath:AT3G02450
InParanoid:Q9M895 OMA:SRRIYYN ProtClustDB:CLSN2685201
Genevestigator:Q9M895 Uniprot:Q9M895
Length = 622
Score = 587 (211.7 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
Identities = 130/268 (48%), Positives = 179/268 (66%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S S AK ++ T V FDD G + K EL EIV L+ ++ G P+GVLL
Sbjct: 315 SASNSPAKKRRSKNPT-VGFDDVEGVDSAKDELVEIVSCLQGSINYKKLGARLPRGVLLV 373
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLA+A+AGEAGVPFF+ + ++FVE+FVG A+R++DLF +AR +PSIIFID
Sbjct: 374 GPPGTGKTLLARAVAGEAGVPFFSVSASEFVELFVGRGAARIRDLFNAARKNSPSIIFID 433
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
E+DA+G KRG ER+Q L Q+LTEMDGF+ S ++V+VI ATNR + LD AL R
Sbjct: 434 ELDAVGGKRGR----SFNDERDQTLNQLLTEMDGFE-SDTKVIVIAATNRPEALDSALCR 488
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRF + V V P ++GR IL +H R+ EE+ ++ +A LT F GA+L NI+
Sbjct: 489 PGRFSRKVLVAEPDQEGRRKILAIHLRDVPL--EEDAFLICDLVASLTPGFVGADLANIV 546
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQK 553
NEA +L AR+ + + +E+++EA++R K
Sbjct: 547 NEAALLAARRGGEAVAREDIMEAIERAK 574
Score = 48 (22.0 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 229 YSSVATAVIWSMRLALAVGLYIWID--NIMRPIYAKLIPCDLGTPPQKTRQP 278
YSS + + SMR L + +WI +M +Y +L + ++++ P
Sbjct: 278 YSSAPQSALMSMRTTLITIISLWIPLTPLMWLLYRQLSASNSPAKKRRSKNP 329
>TAIR|locus:2163736 [details] [associations]
symbol:FTSH11 "FTSH protease 11" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=TAS] [GO:0009408 "response to heat" evidence=IMP]
[GO:0009644 "response to high light intensity" evidence=IMP]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005743 GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0009408 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176
EMBL:AB025622 HOGENOM:HOG000217276 GO:GO:0010304 EMBL:AY091086
EMBL:AY123027 IPI:IPI00537766 RefSeq:NP_568787.1 UniGene:At.7145
ProteinModelPortal:Q9FGM0 SMR:Q9FGM0 MEROPS:M41.018 PaxDb:Q9FGM0
PRIDE:Q9FGM0 EnsemblPlants:AT5G53170.1 GeneID:835398
KEGG:ath:AT5G53170 GeneFarm:4747 TAIR:At5g53170 InParanoid:Q9FGM0
OMA:DIMPEKN PhylomeDB:Q9FGM0 ProtClustDB:CLSN2690002
Genevestigator:Q9FGM0 Uniprot:Q9FGM0
Length = 806
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 172/453 (37%), Positives = 250/453 (55%)
Query: 289 KSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPP 348
K K I+ E+ TF D G + K+EL+E+V LKN +F G PKG+LL G P
Sbjct: 346 KELNKEITPEKNVK-TFKDVKGCDDAKQELEEVVEYLKNPSKFTRLGGKLPKGILLTGAP 404
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLAKAIAGEAGVPFF G++F EMFVGV A RV+ LF +A+ AP IIFIDEID
Sbjct: 405 GTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEID 464
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
A+GS R + ++ L Q+L EMDGF+ + ++V+ ATN DILDPAL R GR
Sbjct: 465 AVGSTRKQWE-----GHTKKTLHQLLVEMDGFEQNEG-IIVMAATNLPDILDPALTRPGR 518
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
FD+ + V P GR IL+++ + K SE DV ++ IA T F GA+L N++N A
Sbjct: 519 FDRHIVVPSPDVRGREEILELYLQGKPM-SE---DVDVKAIARGTPGFNGADLANLVNIA 574
Query: 529 GILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTD-IPEELKLRLAYREAAVAVLACH 587
I A + + + E+L A K G E T + E+ K AY E+ A++A +
Sbjct: 575 AIKAAVEGAEKLSSEQLEFA----KDRIVMGTERKTMFVSEDSKKLTAYHESGHAIVALN 630
Query: 588 LPDPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRAC-APRVIEEQMFGID 646
+ PI + I S M S S L A + C RV EE +FG+D
Sbjct: 631 TKGAH-PIHKATIMPRGSALGMVTQLPSNDETSVSKRQLLARLDVCMGGRVAEELIFGLD 689
Query: 647 NMCWISSKATLDASRLAEFLILQTGMT-AFGKAYYRNQSDLVPNLATKLEALRDEYMRFA 705
++ +S A+ LA++++ GM+ A G + + + ++ ++++A + +R A
Sbjct: 690 HITTGASSDLSQATELAQYMVSSCGMSEAIGPVHIKERPS--SDMQSRIDAEVVKLLREA 747
Query: 706 VEKCASVLREYHSAVETITDILLEKGEIKAEEI 738
E+ S+L+ + + T+ + LLE + AE+I
Sbjct: 748 YERVKSLLKRHEKQLHTLANALLEYETLTAEDI 780
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 170/460 (36%), Positives = 245/460 (53%)
Query: 303 VTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGE 362
V F D G + K ELQE+V L N E F + G PKGVLL GPPGTGKTLLA+A+AGE
Sbjct: 312 VRFSDVHGCDEAKDELQELVEFLLNPERFSSLGGKLPKGVLLVGPPGTGKTLLARAVAGE 371
Query: 363 AGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGG 422
AGVPFF +G++F E++VGV A RV++LF ARS +P+IIFIDE+DAIG+KR D
Sbjct: 372 AGVPFFYMSGSEFDEVYVGVGAKRVRELFNQARSKSPAIIFIDELDAIGAKRNERD---- 427
Query: 423 GAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKDG 482
A +Q L Q+LTE+DGF ST V+++ ATN ++LD AL R GRFD+ V V LP G
Sbjct: 428 AAYVKQTLNQLLTELDGFSQSTG-VIILAATNYPELLDKALTRPGRFDRKVVVDLPDVRG 486
Query: 483 RFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIGQ 542
R ILK H +N + DV + IA T F+GA+L+N++N+A I +R +
Sbjct: 487 RMDILKHHMKNVQIST----DVDVAVIARGTSGFSGADLENLVNQAAIFASRNKQSKVTP 542
Query: 543 EELLEALKRQKGTFETGQED-STDIPEELKLRLAYREAAVAVLACHLPDPYRPIIETDIK 601
++ A K G E S I ++ KL AY EA A++A P P+ + I
Sbjct: 543 KDFDYA----KDKIIMGAEARSRIIQDKDKLLTAYHEAGHALVAYFSPSSM-PLYKITIM 597
Query: 602 SI-RSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMFGIDNMCWISSKATLDAS 660
S + + V YL+ I + +V EE ++G D + S A+
Sbjct: 598 PRGMSLGSTHFLPEMDMVSKNYVQYLSDIDVSMGGKVAEELIYGEDKVTSGISADLASAT 657
Query: 661 RLAEFLILQTGMTA-FGKA-YYRNQSDLVPNLATKLEALRDEYMRFAVEKCASVLREYHS 718
R A L+ + G + G Y N L ++EA + A ++ ++L E
Sbjct: 658 RTAFTLVTRFGYSKKLGNVDLYANYDSLSSETKQEIEAEVRRLVEEARQRATNILTERRH 717
Query: 719 AVETITDILLEKGEIKAEEIWDIYK--KAPQIPQPAVSPV 756
+E +T L++ + EE+ + + ++ PA +P+
Sbjct: 718 ELELLTKALIKYETLTKEEMEKVLRGESLDRLVVPADAPM 757
>UNIPROTKB|F1NTK8 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:AADN02000548 IPI:IPI00601077
Ensembl:ENSGALT00000012112 Uniprot:F1NTK8
Length = 712
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 160/440 (36%), Positives = 245/440 (55%)
Query: 303 VTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGE 362
VTF+ G E K+ELQE+V LKN +F G PKG+LL GPPGTGKTLLA+A+AGE
Sbjct: 275 VTFEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 334
Query: 363 AGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGG 422
A VPF+ A+G++F EMFVGV ASR++ LF A++ AP +IFIDE+D++G KR +
Sbjct: 335 ADVPFYYASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKRIESPMH-- 392
Query: 423 GAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKDG 482
Q + Q+L EMDGFK + V++IGATN + LD AL+R GRFD V V P G
Sbjct: 393 -PYSRQTINQLLAEMDGFKPNEG-VVIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRG 450
Query: 483 RFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIGQ 542
R ILK + NK + ++ D + IA T F+GAEL+N++N+A + A D +
Sbjct: 451 RTEILKWYL-NK-IKYDQSVDPEI--IARGTVGFSGAELENLVNQAALKAAVDGKDMVTM 506
Query: 543 EELLEALKRQKGTFETGQED-STDIPEELKLRLAYREAAVAVLACHLPDPYRPIIETDIK 601
+EL + K G E S +I E+ K AY E+ A++A + D PI + I
Sbjct: 507 KEL----EFSKDKILMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAM-PINKATIM 561
Query: 602 SIRSQ-PNMRYAEISGRVFSRKNDYLNAIVRAC-APRVIEEQMFGIDNMCWISSKATLDA 659
+ + ++ + R +S L A + C R EE +FG D++ +S +A
Sbjct: 562 TRGTTLGHVSLLPENDR-WSETRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDFDNA 620
Query: 660 SRLAEFLILQTGMTA-FGKAYYRNQSDLVPNLATKLEALRDEYMRFAVEKCASVLREYHS 718
+++A+ ++ + GM+ G Y + + P + +E +R + E+ ++L+ +
Sbjct: 621 TKIAKLMVTRFGMSEKLGVMTYTDTGKVSPETQSAIEQEVRTLLRDSYERAKNILKTHAK 680
Query: 719 AVETITDILLEKGEIKAEEI 738
+ + + LL+ + A+EI
Sbjct: 681 EHKNLAEALLKYETLDAKEI 700
>UNIPROTKB|F1P519 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005743 GO:GO:0008283 GO:GO:0004222
GO:GO:0006515 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AADN02000548
IPI:IPI00822340 Ensembl:ENSGALT00000038444 Uniprot:F1P519
Length = 717
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 160/440 (36%), Positives = 245/440 (55%)
Query: 303 VTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGE 362
VTF+ G E K+ELQE+V LKN +F G PKG+LL GPPGTGKTLLA+A+AGE
Sbjct: 280 VTFEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 339
Query: 363 AGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGG 422
A VPF+ A+G++F EMFVGV ASR++ LF A++ AP +IFIDE+D++G KR +
Sbjct: 340 ADVPFYYASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKRIESPMH-- 397
Query: 423 GAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKDG 482
Q + Q+L EMDGFK + V++IGATN + LD AL+R GRFD V V P G
Sbjct: 398 -PYSRQTINQLLAEMDGFKPNEG-VVIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRG 455
Query: 483 RFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIGQ 542
R ILK + NK + ++ D + IA T F+GAEL+N++N+A + A D +
Sbjct: 456 RTEILKWYL-NK-IKYDQSVDPEI--IARGTVGFSGAELENLVNQAALKAAVDGKDMVTM 511
Query: 543 EELLEALKRQKGTFETGQED-STDIPEELKLRLAYREAAVAVLACHLPDPYRPIIETDIK 601
+EL + K G E S +I E+ K AY E+ A++A + D PI + I
Sbjct: 512 KEL----EFSKDKILMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAM-PINKATIM 566
Query: 602 SIRSQ-PNMRYAEISGRVFSRKNDYLNAIVRAC-APRVIEEQMFGIDNMCWISSKATLDA 659
+ + ++ + R +S L A + C R EE +FG D++ +S +A
Sbjct: 567 TRGTTLGHVSLLPENDR-WSETRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDFDNA 625
Query: 660 SRLAEFLILQTGMTA-FGKAYYRNQSDLVPNLATKLEALRDEYMRFAVEKCASVLREYHS 718
+++A+ ++ + GM+ G Y + + P + +E +R + E+ ++L+ +
Sbjct: 626 TKIAKLMVTRFGMSEKLGVMTYTDTGKVSPETQSAIEQEVRTLLRDSYERAKNILKTHAK 685
Query: 719 AVETITDILLEKGEIKAEEI 738
+ + + LL+ + A+EI
Sbjct: 686 EHKNLAEALLKYETLDAKEI 705
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 557 (201.1 bits), Expect = 9.5e-57, Sum P(2) = 9.5e-57
Identities = 125/320 (39%), Positives = 199/320 (62%)
Query: 301 TGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIA 360
+ +TF+D AG + +K EL E+V L+N ++++ G+ PKGVL+ GPPG GKTL+AKA+A
Sbjct: 147 SNITFNDVAGVDEVKMELSELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVA 206
Query: 361 GEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIG 420
GEAGVPFF +G+ FVE++VG+ A RV++LF+ A+ APSI+FIDEIDA+G RG
Sbjct: 207 GEAGVPFFYQSGSSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKARGEMS-- 264
Query: 421 GGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSK 480
ER+ L Q+LT+MDGF+ S V+VI ATN+++++DPALLR GRFD+ + + LP
Sbjct: 265 --NVERDSTLNQLLTQMDGFE-DNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDF 321
Query: 481 DGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYI 540
R IL+++ ++K ++ L +IA+ + F+GA L+ ++NEA I R++ +
Sbjct: 322 KDRLKILEIYMKDK------NNNINLNKIAKASVGFSGAGLETLVNEAAINALRRNSALV 375
Query: 541 GQEELLEALKRQKGTFETGQEDSTDIP-EELKLRLAYREAAVAVLACHLPDPYRPIIETD 599
+ + L + G++ EE K++ Y +AA A+ A +L + I +
Sbjct: 376 EESDFYAVLNKVL----LGKKKILSFNNEEKKIQATY-QAAKALSAYYLDIGFEKITLIE 430
Query: 600 IKSIRSQPNMRY-AEISGRV 618
+ + N+R +E+ R+
Sbjct: 431 DRFKEYEHNIRSKSELINRI 450
Score = 48 (22.0 bits), Expect = 9.5e-57, Sum P(2) = 9.5e-57
Identities = 19/97 (19%), Positives = 44/97 (45%)
Query: 651 ISSKATLDASRLAEFLILQTGMTA-FGKAYYRNQSDLVP-----NLATKLEALRDEYMRF 704
I SK+ L +R+ +L M + ++Y +Q D + + + L + +
Sbjct: 440 IRSKSEL-INRIKVYLAGSRAMKLIYNESYTNSQDDFLKIKELLDYMLSFDMLEESNLSE 498
Query: 705 AVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDI 741
++ L + ++++LLEK +I+ +++ DI
Sbjct: 499 QKKEMDEFLNSMKDKILKLSELLLEKEKIEYDDVKDI 535
>RGD|620764 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;ISS] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO;ISS]
[GO:0007005 "mitochondrion organization" evidence=ISO;ISS]
[GO:0008283 "cell proliferation" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 RGD:620764 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 MEROPS:M41.A20 HOVERGEN:HBG057127
OrthoDB:EOG4KH2TK EMBL:AF151784 IPI:IPI00206065 UniGene:Rn.8153
ProteinModelPortal:Q925S8 SMR:Q925S8 MINT:MINT-4611841
STRING:Q925S8 PRIDE:Q925S8 UCSC:RGD:620764 InParanoid:Q925S8
Genevestigator:Q925S8 GermOnline:ENSRNOG00000017100 Uniprot:Q925S8
Length = 715
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 162/442 (36%), Positives = 248/442 (56%)
Query: 303 VTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGE 362
VTF+ G E K+ELQE+V LKN ++F G PKG+LL GPPGTGKTLLA+A+AGE
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337
Query: 363 AGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGG 422
A VPF+ A+G++F EMFVGV ASR+++LF A++ AP +IFIDE+D++G KR +
Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR--IEFPMH 395
Query: 423 GAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKDG 482
R Q ++Q+L EMDGFK + V++IGATN + LD AL+R GRFD V V P G
Sbjct: 396 PYSR-QTIIQLLAEMDGFKPNEG-VIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKG 453
Query: 483 RFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIGQ 542
R ILK + F +K V + IA T F+GAEL+N++N+A + A +D G+
Sbjct: 454 RTEILKWYLNKIKF----DKSVDPEIIARGTVGFSGAELENLVNQAALKAA---VD--GK 504
Query: 543 EEL-LEALKRQKGTFETGQED-STDIPEELKLRLAYREAAVAVLACHLPDPYRPIIETDI 600
E + ++ L+ K G E S +I + K AY E+ A++A + D PI + I
Sbjct: 505 EMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAM-PINKATI 563
Query: 601 KSIRSQPNMRYAEI---SGRVFSRKNDYLNAIVRACAPRVIEEQMFGIDNMCWISSKATL 657
R P + + + + R + L + + RV EE +FG D++ +S
Sbjct: 564 MP-RG-PTLGHVSLLPENDRWNEIRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFD 621
Query: 658 DASRLAEFLILQTGMTA-FGKAYYRNQSDLVPNLATKLEALRDEYMRFAVEKCASVLREY 716
+A+++A+ ++ + GM+ G Y + L P + +E +R + E+ +L+ +
Sbjct: 622 NATKIAKRMVTKFGMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRESYERAKHILKTH 681
Query: 717 HSAVETITDILLEKGEIKAEEI 738
+ + + LL + A+EI
Sbjct: 682 AKEHKNLAEALLTYETLDAKEI 703
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 169/457 (36%), Positives = 239/457 (52%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAK 357
E V F D G + K EL+EIV L++ F G P+GVLL GPPGTGKT+LA+
Sbjct: 259 ERAINVRFSDVQGVDEAKEELEEIVDFLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLAR 318
Query: 358 AIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGP 417
A+AGEA VPFF +G+ F EM+VGV A RV++LFA+AR APSIIFIDE+DAIG KR
Sbjct: 319 AVAGEANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELDAIGQKRNAR 378
Query: 418 DIGGGGAEREQGLLQILTEMDGFKVSTS---QVLVIGATNRLDILDPALLRKGRFDKIVR 474
D A Q L Q+L ++DGF + V+ IGATN + LDPAL R GRFD+ +
Sbjct: 379 D----AAHMRQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIH 434
Query: 475 VGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTAR 534
V LP GR AIL H R+ KDV L IA T F GA+L N++N+A + A
Sbjct: 435 VPLPDVRGRLAILLQHTRHVPLG----KDVDLSIIARGTSGFAGADLANLINQAAVY-AS 489
Query: 535 KDLDYIGQEELLEALKRQKGTFETGQE-DSTDIPEELKLRLAYREAAVAVLACHLPDPYR 593
K+L + L+ K G E S I E KL AY E A++A + R
Sbjct: 490 KNLSTAVS---MRDLEWSKDRILMGAERKSAFITPENKLMTAYHEGGHALVALFTKNAMR 546
Query: 594 PIIETDIKSIRSQPNMRYA--EISGRVFSRKNDYLNAIVRACAPRVIEEQMFGIDNMCWI 651
P T I S M + ++ ++R+ +YL + R EE ++G D I
Sbjct: 547 PYKAT-IMPRGSSLGMTISLPDMDKDSWTRE-EYLAMLDVTMGGRAAEELLYGKDK---I 601
Query: 652 SSKATLD---ASRLAEFLILQTGMT-AFGKAYYRNQSD-LVPNLATKLEALRDEYMRFAV 706
+S A D A+++A ++ + GM+ G + D L P +E+ + +
Sbjct: 602 TSGAHNDIDKATQVARRMVTEFGMSDRIGPVSLEAEMDNLSPATRALVESEIKSLLEASY 661
Query: 707 EKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYK 743
E+ S+L+ + ++ + L++ + AEE+ + K
Sbjct: 662 ERSLSLLKSHKKELDALATALVDYEFLTAEEMNRVVK 698
>MGI|MGI:1351651 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006515
"misfolded or incompletely synthesized protein catabolic process"
evidence=ISO] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008283
"cell proliferation" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1351651 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 GeneTree:ENSGT00550000074836 KO:K08955
CTD:10730 HOVERGEN:HBG057127 OMA:HTSHVSA EMBL:AF090430
EMBL:AY136286 EMBL:AY136287 EMBL:AK079175 EMBL:BC007128
IPI:IPI00136555 RefSeq:NP_038799.1 UniGene:Mm.23335
ProteinModelPortal:O88967 SMR:O88967 STRING:O88967
PhosphoSite:O88967 PaxDb:O88967 PRIDE:O88967
Ensembl:ENSMUST00000028117 GeneID:27377 KEGG:mmu:27377
InParanoid:O88967 OrthoDB:EOG4KH2TK NextBio:305300 Bgee:O88967
CleanEx:MM_YME1L1 Genevestigator:O88967
GermOnline:ENSMUSG00000026775 Uniprot:O88967
Length = 715
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 161/442 (36%), Positives = 246/442 (55%)
Query: 303 VTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGE 362
VTF+ G E K+ELQE+V LKN ++F G PKG+LL GPPGTGKTLLA+A+AGE
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337
Query: 363 AGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGG 422
A VPF+ A+G++F EMFVGV ASR+++LF A++ AP +IFIDE+D++G KR +
Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMH-- 395
Query: 423 GAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKDG 482
Q + Q+L EMDGFK + V++IGATN + LD AL+R GRFD V V P G
Sbjct: 396 -PYSRQTINQLLAEMDGFKPNEG-VIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKG 453
Query: 483 RFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIGQ 542
R ILK + F +K V + IA T F+GAEL+N++N+A + A +D G+
Sbjct: 454 RTEILKWYLNKIKF----DKSVDPEIIARGTVGFSGAELENLVNQAALKAA---VD--GK 504
Query: 543 EEL-LEALKRQKGTFETGQED-STDIPEELKLRLAYREAAVAVLACHLPDPYRPIIETDI 600
E + ++ L+ K G E S +I + K AY E+ A++A + D PI + I
Sbjct: 505 EMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAM-PINKATI 563
Query: 601 KSIRSQPNMRYAEI---SGRVFSRKNDYLNAIVRACAPRVIEEQMFGIDNMCWISSKATL 657
R P + + + + R + L + + RV EE +FG D++ +S
Sbjct: 564 MP-RG-PTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFD 621
Query: 658 DASRLAEFLILQTGMTA-FGKAYYRNQSDLVPNLATKLEALRDEYMRFAVEKCASVLREY 716
+A+++A+ ++ + GM+ G Y + L P + +E +R + E+ +L+ +
Sbjct: 622 NATKIAKRMVTKFGMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRESYERAKHILKTH 681
Query: 717 HSAVETITDILLEKGEIKAEEI 738
+ + + LL + A+EI
Sbjct: 682 AKEHKNLAEALLTYETLDAKEI 703
>UNIPROTKB|G3V886 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382 RGD:620764
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 OMA:HTSHVSA
UniGene:Rn.8153 EMBL:CH474100 RefSeq:XP_003751780.1
Ensembl:ENSRNOT00000023395 GeneID:100910779 KEGG:rno:100910779
Uniprot:G3V886
Length = 715
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 161/442 (36%), Positives = 246/442 (55%)
Query: 303 VTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGE 362
VTF+ G E K+ELQE+V LKN ++F G PKG+LL GPPGTGKTLLA+A+AGE
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337
Query: 363 AGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGG 422
A VPF+ A+G++F EMFVGV ASR+++LF A++ AP +IFIDE+D++G KR +
Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMH-- 395
Query: 423 GAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKDG 482
Q + Q+L EMDGFK + V++IGATN + LD AL+R GRFD V V P G
Sbjct: 396 -PYSRQTINQLLAEMDGFKPNEG-VIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKG 453
Query: 483 RFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIGQ 542
R ILK + F +K V + IA T F+GAEL+N++N+A + A +D G+
Sbjct: 454 RTEILKWYLNKIKF----DKSVDPEIIARGTVGFSGAELENLVNQAALKAA---VD--GK 504
Query: 543 EEL-LEALKRQKGTFETGQED-STDIPEELKLRLAYREAAVAVLACHLPDPYRPIIETDI 600
E + ++ L+ K G E S +I + K AY E+ A++A + D PI + I
Sbjct: 505 EMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAM-PINKATI 563
Query: 601 KSIRSQPNMRYAEI---SGRVFSRKNDYLNAIVRACAPRVIEEQMFGIDNMCWISSKATL 657
R P + + + + R + L + + RV EE +FG D++ +S
Sbjct: 564 MP-RG-PTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFD 621
Query: 658 DASRLAEFLILQTGMTA-FGKAYYRNQSDLVPNLATKLEALRDEYMRFAVEKCASVLREY 716
+A+++A+ ++ + GM+ G Y + L P + +E +R + E+ +L+ +
Sbjct: 622 NATKIAKRMVTKFGMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRESYERAKHILKTH 681
Query: 717 HSAVETITDILLEKGEIKAEEI 738
+ + + LL + A+EI
Sbjct: 682 AKEHKNLAEALLTYETLDAKEI 703
>UNIPROTKB|F1PRV6 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AAEX03001169
Ensembl:ENSCAFT00000007090 Uniprot:F1PRV6
Length = 748
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 159/442 (35%), Positives = 245/442 (55%)
Query: 303 VTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGE 362
VTF+ G E K+ELQE+V LKN ++F G PKG+LL GPPGTGKTLLA+A+AGE
Sbjct: 312 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 371
Query: 363 AGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGG 422
A VPF+ A+G++F EMFVGV ASR+++LF A++ AP +IFIDE+D++G KR +
Sbjct: 372 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMH-- 429
Query: 423 GAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKDG 482
Q + Q+L EMDGFK + V++IGATN + LD AL+R GRFD V V P G
Sbjct: 430 -PYSRQTINQLLAEMDGFKPNEG-VIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKG 487
Query: 483 RFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIGQ 542
R ILK + F + ++ IA T F+GAEL+N++N+A + A +D G+
Sbjct: 488 RTEILKWYLNKIKFDQSVDPEI----IARGTVGFSGAELENLVNQAALKAA---VD--GK 538
Query: 543 EEL-LEALKRQKGTFETGQED-STDIPEELKLRLAYREAAVAVLACHLPDPYRPIIETDI 600
E + ++ L+ K G E S +I + K AY E+ A++A + D PI + I
Sbjct: 539 EMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAM-PINKATI 597
Query: 601 KSIRSQPNMRYAEI---SGRVFSRKNDYLNAIVRACAPRVIEEQMFGIDNMCWISSKATL 657
R P + + + + R + L + + RV EE +FG D++ +S
Sbjct: 598 MP-RG-PTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFD 655
Query: 658 DASRLAEFLILQTGMTA-FGKAYYRNQSDLVPNLATKLEALRDEYMRFAVEKCASVLREY 716
+A+++A+ ++ + GM+ G Y + L P + +E +R + E+ +L+ +
Sbjct: 656 NATKIAKRMVTKFGMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRDSYERAKHILKTH 715
Query: 717 HSAVETITDILLEKGEIKAEEI 738
+ + + LL + A+EI
Sbjct: 716 AKEHKNLAEALLTYETLDAKEI 737
>UNIPROTKB|Q96TA2 [details] [associations]
symbol:YME1L1 "ATP-dependent zinc metalloprotease YME1L1"
species:9606 "Homo sapiens" [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0016020 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0006508 GO:GO:0004222
EMBL:CH471072 EMBL:AL160291 GO:GO:0030163 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
EMBL:AL162272 HOGENOM:HOG000217276 UniGene:Hs.74647 KO:K08955
EMBL:AF151782 EMBL:AJ132637 EMBL:AY358484 EMBL:AK297973
EMBL:BC023507 EMBL:BC024032 IPI:IPI00045946 IPI:IPI00099529
RefSeq:NP_001240795.1 RefSeq:NP_055078.1 RefSeq:NP_647473.1
UniGene:Hs.499145 ProteinModelPortal:Q96TA2 SMR:Q96TA2
IntAct:Q96TA2 STRING:Q96TA2 MEROPS:M41.A20 PhosphoSite:Q96TA2
DMDM:46397258 PaxDb:Q96TA2 PRIDE:Q96TA2 Ensembl:ENST00000326799
Ensembl:ENST00000375972 Ensembl:ENST00000376016 GeneID:10730
KEGG:hsa:10730 UCSC:uc001iti.3 UCSC:uc001itj.3 CTD:10730
GeneCards:GC10M027439 H-InvDB:HIX0127242 HGNC:HGNC:12843 MIM:607472
neXtProt:NX_Q96TA2 PharmGKB:PA37434 HOVERGEN:HBG057127
InParanoid:Q96TA2 OMA:HTSHVSA PhylomeDB:Q96TA2 ChiTaRS:YME1L1
GenomeRNAi:10730 NextBio:40734 ArrayExpress:Q96TA2 Bgee:Q96TA2
CleanEx:HS_YME1L1 Genevestigator:Q96TA2 GermOnline:ENSG00000136758
Uniprot:Q96TA2
Length = 773
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 159/442 (35%), Positives = 245/442 (55%)
Query: 303 VTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGE 362
VTF+ G E K+ELQE+V LKN ++F G PKG+LL GPPGTGKTLLA+A+AGE
Sbjct: 336 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGE 395
Query: 363 AGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGG 422
A VPF+ A+G++F EMFVGV ASR+++LF A++ AP +IFIDE+D++G KR +
Sbjct: 396 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMH-- 453
Query: 423 GAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKDG 482
Q + Q+L EMDGFK + V++IGATN + LD AL+R GRFD V V P G
Sbjct: 454 -PYSRQTINQLLAEMDGFKPNEG-VIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKG 511
Query: 483 RFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIGQ 542
R ILK + F + ++ IA T F+GAEL+N++N+A + A +D G+
Sbjct: 512 RTEILKWYLNKIKFDQSVDPEI----IARGTVGFSGAELENLVNQAALKAA---VD--GK 562
Query: 543 EEL-LEALKRQKGTFETGQED-STDIPEELKLRLAYREAAVAVLACHLPDPYRPIIETDI 600
E + ++ L+ K G E S +I + K AY E+ A++A + D PI + I
Sbjct: 563 EMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAM-PINKATI 621
Query: 601 KSIRSQPNMRYAEI---SGRVFSRKNDYLNAIVRACAPRVIEEQMFGIDNMCWISSKATL 657
R P + + + + R + L + + RV EE +FG D++ +S
Sbjct: 622 MP-RG-PTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFD 679
Query: 658 DASRLAEFLILQTGMTA-FGKAYYRNQSDLVPNLATKLEALRDEYMRFAVEKCASVLREY 716
+A+++A+ ++ + GM+ G Y + L P + +E +R + E+ +L+ +
Sbjct: 680 NATKIAKRMVTKFGMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRDSYERAKHILKTH 739
Query: 717 HSAVETITDILLEKGEIKAEEI 738
+ + + LL + A+EI
Sbjct: 740 AKEHKNLAEALLTYETLDAKEI 761
>UNIPROTKB|F1RVK1 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008283 "cell proliferation" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 GeneTree:ENSGT00550000074836
OMA:HTSHVSA EMBL:FP016148 Ensembl:ENSSSCT00000012110 Uniprot:F1RVK1
Length = 768
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 159/442 (35%), Positives = 245/442 (55%)
Query: 303 VTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGE 362
VTF+ G E K+ELQE+V LKN ++F G PKG+LL GPPGTGKTLLA+A+AGE
Sbjct: 331 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 390
Query: 363 AGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGG 422
A VPF+ A+G++F EMFVGV ASR+++LF A++ AP +IFIDE+D++G KR +
Sbjct: 391 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMH-- 448
Query: 423 GAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKDG 482
Q + Q+L EMDGFK + V++IGATN + LD AL+R GRFD V V P G
Sbjct: 449 -PYSRQTINQLLAEMDGFKPNEG-VIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKG 506
Query: 483 RFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIGQ 542
R ILK + F + ++ IA T F+GAEL+N++N+A + A +D G+
Sbjct: 507 RTEILKWYLNKIKFDQSVDPEI----IARGTVGFSGAELENLVNQAALKAA---VD--GK 557
Query: 543 EEL-LEALKRQKGTFETGQED-STDIPEELKLRLAYREAAVAVLACHLPDPYRPIIETDI 600
E + ++ L+ K G E S +I + K AY E+ A++A + D PI + I
Sbjct: 558 EMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAM-PINKATI 616
Query: 601 KSIRSQPNMRYAEI---SGRVFSRKNDYLNAIVRACAPRVIEEQMFGIDNMCWISSKATL 657
R P + + + + R + L + + RV EE +FG D++ +S
Sbjct: 617 MP-RG-PTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFD 674
Query: 658 DASRLAEFLILQTGMTA-FGKAYYRNQSDLVPNLATKLEALRDEYMRFAVEKCASVLREY 716
+A+++A+ ++ + GM+ G Y + L P + +E +R + E+ +L+ +
Sbjct: 675 NATKIAKRMVTKFGMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRDSYERAKHILKTH 734
Query: 717 HSAVETITDILLEKGEIKAEEI 738
+ + + LL + A+EI
Sbjct: 735 AKEHKNLAEALLTYETLDAKEI 756
>ZFIN|ZDB-GENE-091113-41 [details] [associations]
symbol:yme1l1a "YME1-like 1a" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-091113-41 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:CU138525 IPI:IPI00962165
Ensembl:ENSDART00000110185 Uniprot:E7EZJ5
Length = 729
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 159/444 (35%), Positives = 243/444 (54%)
Query: 303 VTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGE 362
+TF+ G E K ELQ++V L+N ++F G PKG+LL GPPGTGKTLLA+A+AGE
Sbjct: 292 ITFEHVKGVEEAKNELQDVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 351
Query: 363 AGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGG 422
A VPF+ A+G++F EMFVGV ASR+++LF A++ AP +IFIDE+D++G KR +
Sbjct: 352 ADVPFYYASGSEFDEMFVGVGASRIRNLFKEAKASAPCVIFIDELDSVGGKRIESPMH-- 409
Query: 423 GAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKDG 482
Q + Q+L EMDGFK + V+VIGATN + LD AL+R GRFD V V +P G
Sbjct: 410 -PYSRQTINQLLAEMDGFKPNEG-VIVIGATNFAEALDNALVRPGRFDMQVTVPIPDVKG 467
Query: 483 RFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIGQ 542
R IL+ + + S + ++ IA T F+GAEL+N++N+A + A D +
Sbjct: 468 RTEILEWYLKKIKVDSAIDAEI----IARGTVGFSGAELENLVNQAALKAAADGKDLVTM 523
Query: 543 EELLEALKRQKGTFETGQED-STDIPEELKLRLAYREAAVAVLACHLPDPYRPIIETDIK 601
+EL K K G E S +I + K AY E+ A++A + D PI + I
Sbjct: 524 KEL----KFAKDKILMGPERRSVEIDKRNKTITAYHESGHAIVAYYTKDAM-PINKATIM 578
Query: 602 SIRSQPNMRYAEI---SGRVFSRKNDYLNAIVRACAPRVIEEQMFGIDNMCWISSKATLD 658
R P++ + + + R + L + + RV EE +FG D I+S A+ D
Sbjct: 579 P-RG-PSLGHVSLLPENDRWSETRAQLLAQMDVSMGGRVAEELVFGNDQ---ITSGASSD 633
Query: 659 ---ASRLAEFLILQTGMT-AFGKAYYRNQSDLVPNLATKLEALRDEYMRFAVEKCASVLR 714
A+++A+ ++ + GM+ G Y + + P +E ++ + E+ +L+
Sbjct: 634 FDGATKIAQMMVTRFGMSDKLGVMTYSDLTKHSPETRAAVEQEIRVLLQSSYERAKKILK 693
Query: 715 EYHSAVETITDILLEKGEIKAEEI 738
Y + + D LL + A+EI
Sbjct: 694 TYSKEHKLLADALLTYETLNAKEI 717
>UNIPROTKB|A6QR12 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008283 "cell proliferation" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005 HOGENOM:HOG000217276
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 CTD:10730
HOVERGEN:HBG057127 OMA:HTSHVSA OrthoDB:EOG4KH2TK EMBL:DAAA02035354
EMBL:BC150071 IPI:IPI00866889 RefSeq:NP_001095320.1 UniGene:Bt.1786
SMR:A6QR12 STRING:A6QR12 Ensembl:ENSBTAT00000021868 GeneID:505118
KEGG:bta:505118 InParanoid:A6QR12 NextBio:20866987 Uniprot:A6QR12
Length = 717
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 159/444 (35%), Positives = 246/444 (55%)
Query: 303 VTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGE 362
VTF+ G E K+ELQE+V LKN ++F G PKG+LL GPPGTGKTLLA+A+AGE
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337
Query: 363 AGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGG 422
A VPF+ A+G++F EMFVGV ASR+++LF A++ AP +IFIDE+D++G KR +
Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMH-- 395
Query: 423 GAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKDG 482
Q + Q+L EMDGFK + V++IGATN + LD AL+R GRFD V V P G
Sbjct: 396 -PYSRQTINQLLAEMDGFKPNEG-VIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKG 453
Query: 483 RFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIGQ 542
R ILK + F + ++ IA T F+GAEL+N++N+A + A +D G+
Sbjct: 454 RTEILKWYLNKIKFDQSVDPEI----IARGTVGFSGAELENLVNQAALKAA---VD--GK 504
Query: 543 EEL-LEALKRQKGTFETGQED-STDIPEELKLRLAYREAAVAVLACHLPDPYRPIIETDI 600
E + ++ L+ K G E S +I + K AY E+ A++A + D PI + I
Sbjct: 505 EMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAM-PINKATI 563
Query: 601 KSIRSQPNMRYAEI---SGRVFSRKNDYLNAIVRACAPRVIEEQMFGIDNMC--WISSKA 655
R P + + + + R + L + + RV EE +FG D++ + +S
Sbjct: 564 MP-RG-PTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGSDHITTGYCASSD 621
Query: 656 TLDASRLAEFLILQTGMTA-FGKAYYRNQSDLVPNLATKLEALRDEYMRFAVEKCASVLR 714
+A+++A+ ++ + GM+ G Y + L P + +E +R + E+ +L+
Sbjct: 622 FDNATKIAKRMVTKFGMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRDSYERAKHILK 681
Query: 715 EYHSAVETITDILLEKGEIKAEEI 738
+ + + + LL + A+EI
Sbjct: 682 THAKEHKNLAEALLTYETLDAKEI 705
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 124/262 (47%), Positives = 172/262 (65%)
Query: 291 RAKFISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPG 349
RAK + +E V ++D G E +E++E+V + LK+ E F+ GI PKG+LL+GPPG
Sbjct: 155 RAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPG 214
Query: 350 TGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDA 409
TGKTLLAKA+A E F G++ V+ F+G AS VKD+F A+ APSIIFIDEIDA
Sbjct: 215 TGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDA 274
Query: 410 IGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRF 469
I +KR + GG E ++ L+Q+L EMDGF + V +IGATNR DILDPA+LR GRF
Sbjct: 275 IAAKRTDA-LTGGDREVQRTLMQLLAEMDGFD-ARGDVKIIGATNRPDILDPAILRPGRF 332
Query: 470 DKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAG 529
D+I+ V P + GR ILK+H R + +DV L+EIA++TE GAEL+ I EAG
Sbjct: 333 DRIIEVPAPDEKGRLEILKIHTR----KMNLAEDVNLEEIAKMTEGCVGAELKAICTEAG 388
Query: 530 ILTARKDLDYIGQEELLEALKR 551
+ R+ DY+ ++ +A+++
Sbjct: 389 MNAIRELRDYVTMDDFRKAVEK 410
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 166/475 (34%), Positives = 250/475 (52%)
Query: 281 RRALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPK 340
+ A G+ + AK T +FDD G + +K EL+EIV L + ++ + G PK
Sbjct: 275 KEANGNKPQYFAKEYDETNQTPTSFDDVKGIQEVKEELEEIVDYLLHPTKYNSIGAKLPK 334
Query: 341 GVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPS 400
GVLL G PGTGKTLLA+AIAGEAGV F G+ F E +VGV + RV++LF +AR P
Sbjct: 335 GVLLSGEPGTGKTLLARAIAGEAGVSFLYTTGSSFDEKYVGVGSRRVRELFNAAREKQPC 394
Query: 401 IIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILD 460
IIFIDEIDA+G R A + LLQ+LTEMDGF+ SQ+++IGATN + LD
Sbjct: 395 IIFIDEIDAVGKSRNT-------AHHNETLLQLLTEMDGFE-GNSQIMIIGATNAPNSLD 446
Query: 461 PALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAE 520
PALLR GRFD+ + V +P GR I+ H K + E K IA T FTGA+
Sbjct: 447 PALLRPGRFDRHISVPIPDMKGRSEIID-HYLKKVKHTVEVK---ADTIARATPGFTGAD 502
Query: 521 LQNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAA 580
L N++N A I + + I +++ +A R + ++ + EE + AY EA
Sbjct: 503 LSNLINTAAIKAVQNGKETISIKQIDDA--RDDILMGRARLNAV-MSEEARRNTAYHEAG 559
Query: 581 VAVLACHLPDPYRPIIETDIKSIRSQPNM--RYAEISGRVFSRKNDYLNAIVRAC-APRV 637
A++A + + PI + I M + E+ ++RK + A + C A R
Sbjct: 560 HALVAA-MTEAADPIHKATIVQRGQALGMVSQLPEMDHVQYTRKQ--MMARLAICLAGRA 616
Query: 638 IEEQMFGIDNMCWISSKATLDASRLAEFLILQTGMT-AFGKAYYRNQS--DLVPNLATKL 694
EE FG+D + +S AS LA +I + GM+ G Y+++++ ++ + ++
Sbjct: 617 AEEIFFGVDGVTSGASSDFQQASSLAFSMITKWGMSDKVGFIYHKDKTSPEVQKIIEDEV 676
Query: 695 EALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAPQIP 749
+ L D+ +++ E ++ + +E + LLEK + EEI I +P
Sbjct: 677 KDLLDKQYQYSKE----LIIKNRDNMEKLVGQLLEKETLTGEEILKILNPKVTLP 727
>ZFIN|ZDB-GENE-070410-25 [details] [associations]
symbol:yme1l1b "YME1-like 1b" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-070410-25 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 KO:K08955
MEROPS:M41.A20 HOVERGEN:HBG057127 EMBL:BC139529 IPI:IPI00614293
RefSeq:NP_001082983.1 UniGene:Dr.148676 ProteinModelPortal:A4QNU8
SMR:A4QNU8 STRING:A4QNU8 GeneID:557907 KEGG:dre:557907 CTD:557907
InParanoid:A4QNU8 NextBio:20882221 Uniprot:A4QNU8
Length = 722
Score = 567 (204.7 bits), Expect = 6.8e-55, P = 6.8e-55
Identities = 159/441 (36%), Positives = 237/441 (53%)
Query: 303 VTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGE 362
VTF+ G E K ELQE+V L+N ++F G PKG+LL GPPGTGKTLLA+A+AGE
Sbjct: 285 VTFEHVKGVEEAKNELQEVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 344
Query: 363 AGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGG 422
A VPF+ A+G++F EMFVGV ASR+++LF A+ AP +IFIDE+D++G KR +
Sbjct: 345 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKGNAPCVIFIDELDSVGGKRIESPMH-- 402
Query: 423 GAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKDG 482
Q + Q+L EMDGFK + V++IGATN + LD AL+R GRFD V V P G
Sbjct: 403 -PYSRQTINQLLAEMDGFKPNEG-VIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKG 460
Query: 483 RFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIGQ 542
R ILK + + S E +V IA T F+GAEL+N++N+A + A D +
Sbjct: 461 RTEILKWYLKKIKVDSAVEAEV----IARGTVGFSGAELENLVNQAALKAAVDGKDMVTM 516
Query: 543 EELLEALKRQKGTFETGQED-STDIPEELKLRLAYREAAVAVLACHLPDPYRPIIETDIK 601
+EL A K G E S +I + K AY E+ A++A + D PI + I
Sbjct: 517 KELEFA----KDKILMGPERRSAEIDKRNKEITAYHESGHAIIAYYTKDAM-PINKATIM 571
Query: 602 SIRSQPNMRYAEI---SGRVFSRKNDYLNAIVRACAPRVIEEQMFGIDNMCWISSKATLD 658
R P + + + + R + L + + RV EE +FG +N+ +S
Sbjct: 572 P-RG-PTLGHVSMLPENDRWSETRAQLLAQMDVSMGGRVAEELIFGNENITTGASSDFDS 629
Query: 659 ASRLAEFLILQTGMTA-FGKAYYRNQSDLVPNLATKLEALRDEYMRFAVEKCASVLREYH 717
A+++A+ ++ + GM+ G Y + + P +E +R + E+ ++L+
Sbjct: 630 ATKIAKMMVTRFGMSEKLGVMTYSDLTKQSPETQAAIEHEVRILLRDSYERAKALLKSRA 689
Query: 718 SAVETITDILLEKGEIKAEEI 738
+ + LL + A+EI
Sbjct: 690 KEHRNLAEALLRYETLDAKEI 710
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 565 (203.9 bits), Expect = 1.2e-54, P = 1.2e-54
Identities = 160/449 (35%), Positives = 232/449 (51%)
Query: 299 ETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKA 358
E VTF+D G + K+EL+E+V LK+ E+F N G PKGVLL GPPGTGKTLLA+A
Sbjct: 293 EEINVTFEDVKGCDEAKQELKEVVEFLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARA 352
Query: 359 IAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPD 418
+AGEA VPFF A G +F E+ VG A RV+DLF +A++ AP +IFIDEID++G+KR
Sbjct: 353 VAGEAKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEIDSVGAKRTNSV 412
Query: 419 IGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLP 478
+ Q + Q+L+EMDGF + V+V+GATNR D LD ALLR GRFD V V P
Sbjct: 413 LH---PYANQTINQLLSEMDGFHQNAG-VIVLGATNRRDDLDQALLRPGRFDVEVMVSTP 468
Query: 479 SKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLD 538
GR IL ++ K E + D+L A T FTGA+L+N++N+A + A +
Sbjct: 469 DFTGRKEILSLYL-TKILHDEIDLDML----ARGTSGFTGADLENMINQAALRAAIDGAE 523
Query: 539 YIGQEELLEALKRQKGTFETGQEDSTDIP-EELKLRLAYREAAVAVLACHLPDPYRPIIE 597
+ + L A R K G E +P EE AY E A++A + + + P+ +
Sbjct: 524 TVSMKHLETA--RDKVLM--GPERKARLPDEEANTITAYHEGGHAIVAFYTKESH-PLHK 578
Query: 598 TDIKSIR-SQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMFGIDNMCWISSKAT 656
I S + Y R K L + R EE +FG D + +S
Sbjct: 579 VTIMPRGPSLGHTAYIPEKERYHVTKAQLLAMMDTMMGGRAAEELVFGTDKITSGASSDL 638
Query: 657 LDASRLAEFLILQTGM-------TAFGKAYYRNQSDLVPNLATKLEALRDEYMRFAVEKC 709
A+ +A ++ GM T L PN ++A + + E+
Sbjct: 639 KQATSIATHMVRDWGMSDKVGLRTIEASKGLGTGDTLGPNTIEAVDAEIKRILSDSYERA 698
Query: 710 ASVLREYHSAVETITDILLEKGEIKAEEI 738
++LR++ + + + LL+ + A++I
Sbjct: 699 KAILRKHTREHKALAEALLKYETLDADDI 727
>UNIPROTKB|J9NRR9 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 GeneTree:ENSGT00550000074836 EMBL:AAEX03001169
Ensembl:ENSCAFT00000045217 Uniprot:J9NRR9
Length = 694
Score = 558 (201.5 bits), Expect = 8.0e-54, P = 8.0e-54
Identities = 151/399 (37%), Positives = 226/399 (56%)
Query: 303 VTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGE 362
VTF+ G E K+ELQE+V LKN ++F G PKG+LL GPPGTGKTLLA+A+AGE
Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337
Query: 363 AGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGG 422
A VPF+ A+G++F EMFVGV ASR+++LF A++ AP +IFIDE+D++G KR +
Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMH-- 395
Query: 423 GAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKDG 482
Q + Q+L EMDGFK + V++IGATN + LD AL+R GRFD V V P G
Sbjct: 396 -PYSRQTINQLLAEMDGFKPNEG-VIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKG 453
Query: 483 RFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIGQ 542
R ILK + F + ++ IA T F+GAEL+N++N+A + A +D G+
Sbjct: 454 RTEILKWYLNKIKFDQSVDPEI----IARGTVGFSGAELENLVNQAALKAA---VD--GK 504
Query: 543 EEL-LEALKRQKGTFETGQED-STDIPEELKLRLAYREAAVAVLACHLPDPYRPIIETDI 600
E + ++ L+ K G E S +I + K AY E+ A++A + D PI + I
Sbjct: 505 EMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAM-PINKATI 563
Query: 601 KSIRSQPNMRYAEI---SGRVFSRKNDYLNAIVRACAPRVIEEQMFGIDNMCWISSKATL 657
R P + + + + R + L + + RV EE +FG D++ +S
Sbjct: 564 MP-RG-PTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFD 621
Query: 658 DASRLAEFLILQTGMTA-FGKAYYRNQSDLVPNLATKLE 695
+A+++A+ ++ + GM+ G Y + L P + +E
Sbjct: 622 NATKIAKRMVTKFGMSEKLGVMTYSDTGKLSPETQSAIE 660
>GENEDB_PFALCIPARUM|PF14_0616 [details] [associations]
symbol:PF14_0616 "i-AAA protease, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 556 (200.8 bits), Expect = 1.4e-53, P = 1.4e-53
Identities = 155/456 (33%), Positives = 237/456 (51%)
Query: 287 LGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHG 346
+G S K I E VTF D G + +K+EL+EI+ LKN ++F G PKG+LL G
Sbjct: 236 IGVSNKKIIPVENVK-VTFADVKGCDEVKQELEEIIDYLKNSDKFTKIGAKLPKGILLSG 294
Query: 347 PPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDE 406
PGTGKTL+A+AIAGEA VPF A+G++F EMFVGV A R+++LF +A+ AP I+FIDE
Sbjct: 295 EPGTGKTLIARAIAGEANVPFLQASGSEFEEMFVGVGARRIRELFQAAKKHAPCIVFIDE 354
Query: 407 IDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRK 466
IDA+GSKR D A R L Q+L E+DGF+ + ++VI ATN LD AL+R
Sbjct: 355 IDAVGSKRSSRD---NSAVR-MTLNQLLVELDGFEQNEG-IVVICATNFPQSLDKALVRP 409
Query: 467 GRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILN 526
GR DK + V LP GR+ ILK+++ NK S KDV L ++ T TGA+L NILN
Sbjct: 410 GRLDKTIVVPLPDIKGRYEILKMYS-NKIVLS---KDVDLHVLSRRTVGMTGADLNNILN 465
Query: 527 EAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLAC 586
A I + + + + +A R G + + + EE K AY E ++
Sbjct: 466 IAAIKCSVEGKKSVDMNSIEQAFDR----VVVGLQRKSPLNEEEKNITAYHEGGHTLVNF 521
Query: 587 HLPDPYRPIIETDIKSIRSQPNMRYA-EISGRVFSRKNDYLNAIVRACAPRVIEEQMFGI 645
+ P+ + I + + IS + + D + I V EE +FG
Sbjct: 522 YTKGS-DPVHKATIMPRGMSLGVTWKIPISDKYSQKIKDVQSEIDILMGGLVSEEIIFGK 580
Query: 646 DNMCWISSKATLDASRLAEFLILQTGMTAFG---KAYYRNQSDLVPNLATKLEALRDEYM 702
+N+ S A+ +A+ L++ G+ + ++ ++ + K++ +
Sbjct: 581 NNVTTGCSSDLQKATHIAQSLVMNYGVGINEDNISMFLHDKQNISEEMKIKIDKSIQRIL 640
Query: 703 RFAVEKCASVLREYHSAVETITDILLEKGEIKAEEI 738
+ + +VL ++ + I L+E + ++EI
Sbjct: 641 LDSYNRAKNVLNQHIDELHRIASALVEYETLTSDEI 676
>UNIPROTKB|Q8IKI9 [details] [associations]
symbol:PF14_0616 "ATP-dependent protease la, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 556 (200.8 bits), Expect = 1.4e-53, P = 1.4e-53
Identities = 155/456 (33%), Positives = 237/456 (51%)
Query: 287 LGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHG 346
+G S K I E VTF D G + +K+EL+EI+ LKN ++F G PKG+LL G
Sbjct: 236 IGVSNKKIIPVENVK-VTFADVKGCDEVKQELEEIIDYLKNSDKFTKIGAKLPKGILLSG 294
Query: 347 PPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDE 406
PGTGKTL+A+AIAGEA VPF A+G++F EMFVGV A R+++LF +A+ AP I+FIDE
Sbjct: 295 EPGTGKTLIARAIAGEANVPFLQASGSEFEEMFVGVGARRIRELFQAAKKHAPCIVFIDE 354
Query: 407 IDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRK 466
IDA+GSKR D A R L Q+L E+DGF+ + ++VI ATN LD AL+R
Sbjct: 355 IDAVGSKRSSRD---NSAVR-MTLNQLLVELDGFEQNEG-IVVICATNFPQSLDKALVRP 409
Query: 467 GRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILN 526
GR DK + V LP GR+ ILK+++ NK S KDV L ++ T TGA+L NILN
Sbjct: 410 GRLDKTIVVPLPDIKGRYEILKMYS-NKIVLS---KDVDLHVLSRRTVGMTGADLNNILN 465
Query: 527 EAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLAC 586
A I + + + + +A R G + + + EE K AY E ++
Sbjct: 466 IAAIKCSVEGKKSVDMNSIEQAFDR----VVVGLQRKSPLNEEEKNITAYHEGGHTLVNF 521
Query: 587 HLPDPYRPIIETDIKSIRSQPNMRYA-EISGRVFSRKNDYLNAIVRACAPRVIEEQMFGI 645
+ P+ + I + + IS + + D + I V EE +FG
Sbjct: 522 YTKGS-DPVHKATIMPRGMSLGVTWKIPISDKYSQKIKDVQSEIDILMGGLVSEEIIFGK 580
Query: 646 DNMCWISSKATLDASRLAEFLILQTGMTAFG---KAYYRNQSDLVPNLATKLEALRDEYM 702
+N+ S A+ +A+ L++ G+ + ++ ++ + K++ +
Sbjct: 581 NNVTTGCSSDLQKATHIAQSLVMNYGVGINEDNISMFLHDKQNISEEMKIKIDKSIQRIL 640
Query: 703 RFAVEKCASVLREYHSAVETITDILLEKGEIKAEEI 738
+ + +VL ++ + I L+E + ++EI
Sbjct: 641 LDSYNRAKNVLNQHIDELHRIASALVEYETLTSDEI 676
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 552 (199.4 bits), Expect = 4.0e-53, P = 4.0e-53
Identities = 160/472 (33%), Positives = 249/472 (52%)
Query: 279 LQRRALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYC 338
++ R +G G + + + F D G + K EL+EIV L++ + F G
Sbjct: 201 IEDRGIGK-GLGLHEEVQPSMDSSTKFSDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKL 259
Query: 339 PKGVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFA 398
PKGVLL GPPGTGKT+LA+AIAGEAGVPFF+ +G++F EMFVGV A RV+DLF++A+ +
Sbjct: 260 PKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCS 319
Query: 399 PSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDI 458
P IIFIDEIDAIG R D + L Q+L E+DGFK + ++V+ ATN +
Sbjct: 320 PCIIFIDEIDAIGGSRNPKD----QQYMKMTLNQMLVELDGFKQNEG-IIVVAATNFPES 374
Query: 459 LDPALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTG 518
LD AL+R GRFD+ + V P +GR IL+ H +K ++E DV L IA T F+G
Sbjct: 375 LDKALVRPGRFDRHIVVPNPDVEGRRQILESHM-SKVLKAE---DVDLMIIARGTPGFSG 430
Query: 519 AELQNILNEAGILTARKDLDYIGQEEL-LEALKRQKGTFETGQE-DSTDIPEELKLRLAY 576
A+L N++N A + A +D G +++ + L+ K G E S I +E + A+
Sbjct: 431 ADLANLVNVAALKAA---MD--GSKDVTMSDLEFAKDRIMMGSERKSAVISDESRKLTAF 485
Query: 577 REAAVAVLACHLPDPYRPIIETDIKSIRSQPNM--RYAEISGRVFSRKNDYLNAIVRAC- 633
E A++A H P+ + I M + + SRK + A + C
Sbjct: 486 HEGGHALVAIHTEGAL-PVHKATIVPRGMALGMVSQLPDKDETSISRKQ--MLARLDVCM 542
Query: 634 APRVIEEQMFGIDNMCWISSKATLDASRLAEFLILQTGMTAFGKAYYRNQSDLVPNLATK 693
RV EE +FG + +S A++LA ++ + GM+ N D +++T+
Sbjct: 543 GGRVAEELIFGESEVTSGASSDLEQATKLARAMVTKFGMSKEVGLVAHNYDDNGKSMSTE 602
Query: 694 LEALRDEYMRFAVEKC----ASVLREYHSAVETITDILLEKGEIKAEEIWDI 741
L + ++ +EK ++L Y+ + + + LL+ + ++I ++
Sbjct: 603 TRLLIESEVKQLLEKAYNNAKTILTVYNKELHALANALLQHETLSGKQIKEL 654
>SGD|S000006228 [details] [associations]
symbol:YME1 "Catalytic subunit of the mitochondrial inner
membrane i-AAA protease" species:4932 "Saccharomyces cerevisiae"
[GO:0006457 "protein folding" evidence=IMP] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IGI;IMP]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031942 "i-AAA complex"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
SGD:S000006228 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0004222 EMBL:Z71255 EMBL:BK006949 GO:GO:0006515
eggNOG:COG0465 TIGRFAMs:TIGR01241 EMBL:Z49274 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942
GeneTree:ENSGT00550000074836 KO:K08955 OrthoDB:EOG4FR40W
EMBL:L14616 EMBL:X81067 EMBL:D16332 PIR:S54498 RefSeq:NP_015349.1
ProteinModelPortal:P32795 SMR:P32795 IntAct:P32795 STRING:P32795
PaxDb:P32795 PeptideAtlas:P32795 EnsemblFungi:YPR024W GeneID:856135
KEGG:sce:YPR024W CYGD:YPR024w OMA:SEFDEVY NextBio:981236
Genevestigator:P32795 GermOnline:YPR024W Uniprot:P32795
Length = 747
Score = 548 (198.0 bits), Expect = 4.7e-52, P = 4.7e-52
Identities = 159/453 (35%), Positives = 237/453 (52%)
Query: 301 TGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIA 360
T V FDD G + + EL+EIV LK+ ++++ G PKGVLL GPPGTGKTLLA+A A
Sbjct: 276 TNVKFDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATA 335
Query: 361 GEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIG 420
GEAGV FF +G++F E++VGV A R++DLFA ARS AP+IIFIDE+DAIG KR D
Sbjct: 336 GEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKRNPKD-- 393
Query: 421 GGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSK 480
A +Q L Q+L E+DGF TS +++IGATN + LD AL R GRFDK+V V LP
Sbjct: 394 --QAYAKQTLNQLLVELDGFS-QTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDV 450
Query: 481 DGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYI 540
GR ILK H + + + IA T +GAEL N++N+A + +K+ +
Sbjct: 451 RGRADILKHHMKKITLADNVDPTI----IARGTPGLSGAELANLVNQAAVYACQKNAVSV 506
Query: 541 GQEELLEALKRQKGTFETGQEDSTDI-PEELKLRLAYREAAVAVLACHLPDPYRPIIETD 599
A K G E T + + + A+ EA A++A + + P+ +
Sbjct: 507 DMSHFEWA----KDKILMGAERKTMVLTDAARKATAFHEAGHAIMAKYT-NGATPLYKAT 561
Query: 600 IKSIRSQP---NMRYAEISGRVFSRKNDYLNAIVRAC-APRVIEEQMFGIDNMCWISSKA 655
I R + + E+ +V K + A + C ++ EE ++G DN
Sbjct: 562 ILP-RGRALGITFQLPEMD-KVDITKRE-CQARLDVCMGGKIAEELIYGKDNTTSGCGSD 618
Query: 656 TLDASRLAEFLILQTGMTA-FGKAYYRNQSDLVPNLATKLEALRD----EYMRFAVEKCA 710
A+ A ++ Q GM+ G N S+ + + K+ + D E ++ + E+
Sbjct: 619 LQSATGTARAMVTQYGMSDDVGPV---NLSENWESWSNKIRDIADNEVIELLKDSEERAR 675
Query: 711 SVLREYHSAVETITDILLEKGEIKAEEIWDIYK 743
+L + + + + L+E + A EI + K
Sbjct: 676 RLLTKKNVELHRLAQGLIEYETLDAHEIEQVCK 708
>UNIPROTKB|A7E2Z6 [details] [associations]
symbol:SPG7 "SPG7 protein" species:9913 "Bos taurus"
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
MEROPS:M41.006 CTD:6687 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
EMBL:DAAA02046269 EMBL:BC151632 IPI:IPI00866907
RefSeq:NP_001095492.1 UniGene:Bt.11239 SMR:A7E2Z6 STRING:A7E2Z6
Ensembl:ENSBTAT00000032500 GeneID:515269 KEGG:bta:515269
InParanoid:A7E2Z6 NextBio:20871741 Uniprot:A7E2Z6
Length = 779
Score = 553 (199.7 bits), Expect = 9.0e-52, P = 9.0e-52
Identities = 163/487 (33%), Positives = 243/487 (49%)
Query: 283 ALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGV 342
A L +R + + GV+F D AG K E++E V LK+ E F G PKG
Sbjct: 286 AFNQLKMARFTIVDGKMGKGVSFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKGA 345
Query: 343 LLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSII 402
LL GPPG GKTLLAKA+A EA VPF A G +FVE+ G+ A+RV+ LF AR+ AP I+
Sbjct: 346 LLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIV 405
Query: 403 FIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPA 462
+IDEIDA+G KR G E EQ L Q+L EMDG +T V+V+ ATNR DILD A
Sbjct: 406 YIDEIDAVGKKRSTAVSGFSNTEEEQTLNQLLVEMDGMG-TTDHVIVLAATNRADILDNA 464
Query: 463 LLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQ 522
LLR GR D+ V + LP+ R I + H ++ + Q +AELT F+GA++
Sbjct: 465 LLRPGRLDRHVFIDLPTLQERKEIFEQHLKS--LKLTRASSFYSQRLAELTPGFSGADIA 522
Query: 523 NILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVA 582
NI NEA + AR+ + L A++R T ++ EE K+ +A+ E+ A
Sbjct: 523 NICNEAALHAAREGHTAVHTSNLDYAVERVVAG--TAKKSKVLSKEEQKV-VAFHESGHA 579
Query: 583 VLACHLPDPYRPIIETDIKSIRSQPNMRYAEISGR---VFSRKNDYLNAIVRACAPRVIE 639
++ L + +++ I R+ + +A++ R +F+R+ + + A R E
Sbjct: 580 LVGWLL-EHTEAVMKVSITP-RTNAALGFAQMLPRDQHLFTREQLF-ERMCMALGGRASE 636
Query: 640 EQMFGIDNMCWISSKATL-DASRLAEFLILQTGMT-AFGKAYYRNQSDLVPNLATK---- 693
F N ++ L +R+A ++ Q GM + G + + V + +
Sbjct: 637 SISF---NRVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPVSFPEAQEGVTGIGRRPFSQ 693
Query: 694 -LEALRDEYMRFAVEKC----ASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAPQI 748
L+ + D R V VLR+ + + LLEK I E+I + P
Sbjct: 694 GLQQMIDHEARLLVATAYRHTEQVLRDNLDKLHALASALLEKEVINYEDIEALIGPPPHG 753
Query: 749 PQPAVSP 755
P+ ++P
Sbjct: 754 PKKKIAP 760
>DICTYBASE|DDB_G0267492 [details] [associations]
symbol:DDB_G0267492 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0267492 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
EMBL:AAFI02000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 RefSeq:XP_647076.1
ProteinModelPortal:Q55GV8 SMR:Q55GV8 MEROPS:M41.A18
EnsemblProtists:DDB0189322 GeneID:8615880 KEGG:ddi:DDB_G0267492
OMA:RINENNQ Uniprot:Q55GV8
Length = 720
Score = 540 (195.1 bits), Expect = 9.8e-52, P = 9.8e-52
Identities = 151/450 (33%), Positives = 232/450 (51%)
Query: 294 FISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
F + E TF D G E K ELQ++V L+N E++ + I PKG+LL GPPGTGKT
Sbjct: 152 FKTLVERPNTTFADVMGAEEAKGELQDLVDFLRNPEKYYRRNIVMPKGILLVGPPGTGKT 211
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLAK++AGEA V F NG++F E FVGV A RV++LF +AR +P I+FIDEID++G
Sbjct: 212 LLAKSLAGEARVSFITINGSEFEEAFVGVGAKRVRELFEAARKNSPCIVFIDEIDSVGGS 271
Query: 414 RGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIV 473
R + +E L Q+L E+DGF V+V+ ATN D LD AL+R GRFD+I+
Sbjct: 272 RT-KRVNYHPSE---ALNQLLVELDGFD-GREGVMVMAATNYQDSLDTALIRSGRFDRII 326
Query: 474 RVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTA 533
+V LP R +I+ + ++K S V IA+ T F+GA+L N++N A + T
Sbjct: 327 QVPLPDGKARKSIIDHYLKDKPIASH----VNTTTIAQSTPGFSGADLFNLVNWAALETT 382
Query: 534 RKDLDYIGQEELLEALKRQKGTFETGQE-DSTDIPEELKLRLAYREAAVAVLACHLPDPY 592
+ +L I E+L A K G+E S + +E + A+ EA A++A P
Sbjct: 383 KHNLPEITMEQLENA----KENLMMGKERHSLLMSDEARKICAFHEAGHALVAIMTPGA- 437
Query: 593 RPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMFGIDNMCWIS 652
R + + I + F K + + A R EE + G +N+ +
Sbjct: 438 RTVHKATIMPRGDALGLVSMLEKEETFVTKKQLIAQMDVAMGGRAAEELILGKENISQGA 497
Query: 653 SKATLDASRLAEFLILQTGMTA-FGKAYYRNQSDLVPNLATKLEALRDEYMRFAVEKCAS 711
S A+ +A+ ++ GM+ G+ Y +++ L +++ + + +
Sbjct: 498 SSDIQKATSIAKAMVSNYGMSEKVGQIYIQSEKKLSSAQRELVDSEVKSLLDSSYIRATQ 557
Query: 712 VLREYHSAVETITDILLEKGEIKAEEIWDI 741
+L++Y I + LLE + +EI DI
Sbjct: 558 LLKKYSKEHHLIANALLEYETLSLDEIKDI 587
>UNIPROTKB|F1NXP0 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
Length = 768
Score = 551 (199.0 bits), Expect = 1.1e-51, P = 1.1e-51
Identities = 160/489 (32%), Positives = 252/489 (51%)
Query: 283 ALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGV 342
A L +R + + G+ F D AG K E++E V LKN + + G PKG
Sbjct: 259 AFNQLKMARFTIVDGKSGKGIGFKDVAGMHEAKMEVKEFVDYLKNPDRYLQLGAKVPKGA 318
Query: 343 LLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSII 402
LL GPPG GKTLLAKA+A EA VPF A G++FVE+ G+ A+RV+ LF A++ AP I+
Sbjct: 319 LLLGPPGCGKTLLAKAVATEAQVPFLAMAGSEFVEVIGGLGAARVRSLFREAQARAPCIV 378
Query: 403 FIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPA 462
+IDEIDA+G KR G AE EQ L Q+L EMDG +T V+V+ +TNR D+LD A
Sbjct: 379 YIDEIDAVGKKRSTNVSGFANAEEEQTLNQLLVEMDGMG-TTDHVIVLASTNRADVLDNA 437
Query: 463 LLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQ 522
L+R GR D+ + + LP+ R I + H + + ++ Q +AELT F+GA++
Sbjct: 438 LMRPGRLDRHIFIDLPTLQERREIFEQHLKG--LKLIQDASFYSQHLAELTPGFSGADIA 495
Query: 523 NILNEAGILTAR---KDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREA 579
NI NEA + AR K +D E +E + GT + + S PEE K+ +A+ E+
Sbjct: 496 NICNEAALHAAREGHKSIDTFNFEYAVERVIA--GTAKRNKILS---PEERKV-VAFHES 549
Query: 580 AVAVLACHLPDPYRPIIETDIKSIRSQPNMRYAEISGR---VFSRKNDYLNAIVRACAPR 636
A++ L + +++ I R+ + +A+I R +F+ K L + A R
Sbjct: 550 GHALVGWLL-EHTEAVMKVSIAP-RTNAALGFAQILPREQYLFT-KEQLLERMCMALGGR 606
Query: 637 VIEEQMFGIDNMCWISSKATLD-ASRLAEFLILQTGMT-AFGKAYYRNQSDLVP----NL 690
V E F N ++ L +++A ++ Q GM + G+ + + V
Sbjct: 607 VSEAITF---NKVTTGAQDDLKRVTKIAYSMVKQYGMVPSIGQISFPDGESTVGIGRRPF 663
Query: 691 ATKLEALRDEYMRFAV----EKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
+ L+ + D + V + +L + ++T+++ LLEK I ++I + P
Sbjct: 664 SQGLQQMMDHEAKVLVAQAYRRTEKLLLDNRDKLQTLSNALLEKEVINYDDIEALIGPPP 723
Query: 747 QIPQPAVSP 755
P+ ++P
Sbjct: 724 YGPKKMIAP 732
>CGD|CAL0002950 [details] [associations]
symbol:YME1 species:5476 "Candida albicans" [GO:0031942
"i-AAA complex" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0001300 "chronological cell aging" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 CGD:CAL0002950 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.004
EMBL:AACQ01000068 EMBL:AACQ01000067 KO:K08955 RefSeq:XP_716504.1
RefSeq:XP_716560.1 ProteinModelPortal:Q5A458 SMR:Q5A458
STRING:Q5A458 GeneID:3641816 GeneID:3641839 KEGG:cal:CaO19.1252
KEGG:cal:CaO19.8836 Uniprot:Q5A458
Length = 687
Score = 539 (194.8 bits), Expect = 1.3e-51, P = 1.3e-51
Identities = 158/462 (34%), Positives = 239/462 (51%)
Query: 293 KFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
K + ++T V F D G + + EL+EIV LK+ +F G PKGVLL GPPGTGK
Sbjct: 213 KSVDVSQST-VRFKDVQGCDEARAELEEIVDFLKDPSKFTGLGGKLPKGVLLTGPPGTGK 271
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TLLA+A AGEAGVPFF +G++F E++VGV A R+++LF+ AR AP+IIFIDE+DAIG
Sbjct: 272 TLLARATAGEAGVPFFFMSGSEFDELYVGVGAKRIRELFSQARDKAPAIIFIDELDAIGG 331
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
KR D A +Q L Q+L E+DGF T +++IGATN + LD AL R GRFDK
Sbjct: 332 KRNPKD----QAYAKQTLNQLLVELDGFS-QTEGIIIIGATNFPESLDKALTRPGRFDKE 386
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
V V LP GR ILK H +N E DV IA T +GAEL N++N+A +
Sbjct: 387 VIVDLPDVRGRIDILKHHMQNV----ETADDVDPSIIARGTPGLSGAELMNLVNQAAVHA 442
Query: 533 ARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLACHLPDPY 592
++ + A + K ++ I EE ++ AY EA A++A
Sbjct: 443 SQLSAPAVDMNHFEWA--KDKILMGAAKKKMV-ITEESRINTAYHEAGHAIMAMFSKGA- 498
Query: 593 RPIIETDIKSIRSQP---NMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMFGIDNMC 649
P+ + I R + + E+ +V K + + ++ EE + G +N+
Sbjct: 499 TPLYKATILP-RGRALGITFQLPEMD-KVDMSKQECFARLDVCMGGKIAEEMINGKENVT 556
Query: 650 WISSKATLDASRLAEFLILQTGMT-AFGKAY----YRNQSDLVPNLATKLEALRDEYMRF 704
+ +A+ +A ++ GM+ G + + S + N+A +RD Y+
Sbjct: 557 SGCASDLSNATSVARAMVTSYGMSDKIGPVRLSDDWESWSPQIRNMADN--EVRD-YLLD 613
Query: 705 AVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
+ ++ +L + ++ + + LLE + EE+ + K P
Sbjct: 614 SEKRTRKLLYDKRLELKRLAEGLLEYETLTKEEMEKVVKGEP 655
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 539 (194.8 bits), Expect = 1.3e-51, P = 1.3e-51
Identities = 177/520 (34%), Positives = 260/520 (50%)
Query: 254 NIMRPIYAKLIPCDL-GTPPQKTRQPLQRRALGSLGKSRAKFISAEETTGVTFDDFAGQE 312
N + Y L+ C G + R + R +GSL S + ++ E+ VTFDD G +
Sbjct: 196 NTLTRFYIFLVFCIFFGYLTGRIRVRVGDRQIGSLFFSNPQEVNPEDVQ-VTFDDVRGMD 254
Query: 313 YIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGVPFFAANG 372
K E++EIV LK+ E++ G PKGVLL GPPGTGKTLLA+AIAGEA VPFF G
Sbjct: 255 EAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFHTAG 314
Query: 373 TDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQ 432
++F E+ VG A RV+DLF A++ AP IIFIDEID++GSKR I Q + Q
Sbjct: 315 SEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGSKRVSNSIH---PYANQTINQ 371
Query: 433 ILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKD--GRFAILKVH 490
+L+EMDGF ++VI ATNR+D LD ALLR GRFD VRV +P D GR I +
Sbjct: 372 LLSEMDGF-TRNEGIIVIAATNRVDDLDKALLRPGRFD--VRVTVPKPDLAGRVDIFNFY 428
Query: 491 ARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIGQEELLEALK 550
+ VL A+ + FTGA+++N++N+A + A + + L EA
Sbjct: 429 LSKIVHSGGIDPKVL----AKGSTGFTGADIENMVNQAALKAATDNAVEVTMAYLDEARD 484
Query: 551 RQ-KGTFETGQEDSTDIP-EELKLRLAYREAAVAVLACHLPDPYRPIIETDIKSIRSQPN 608
R G TG IP EE AY EA +++ + D P+ + I R Q
Sbjct: 485 RVLMGPARTGGR----IPDEEANRNTAYHEAGHTLVSLYTKDA-TPLHKVTIIP-RGQSL 538
Query: 609 MRYAEISGRVFSR--KNDYLNAIVRACAPRVIEEQMFGIDNMCWISSKATLDASRLAEFL 666
A + + + K L + RV EE +FG D + ++ A++LA +
Sbjct: 539 GHTAMLPEKDSYQLTKAQMLATLDVMMGGRVAEELIFGDDKVTTGAADDLSKATQLAVQM 598
Query: 667 ILQTGMT-AFGKAYYRNQ---------SDLVPNLATKLEALRDEYMRFAVEKCASVLREY 716
+ GM+ G + Q SDL P A ++A + ++ + ++ +L
Sbjct: 599 VKVFGMSDKVGLRDFTAQDNESALVKVSDLAPQTAELIDAEINRVLQESYKRAKVILETK 658
Query: 717 HSAVETITDILLEKGEIKAEEIWDIYKKAPQIPQPAVSPV 756
+ + + LLE + A+E+ + +I +P + V
Sbjct: 659 KKEHQLLAEALLEYETLSADEVKRVIS-GQKIKRPTPAAV 697
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 553 (199.7 bits), Expect = 2.1e-51, P = 2.1e-51
Identities = 156/499 (31%), Positives = 252/499 (50%)
Query: 268 LGTPPQKTRQPLQRRALGSLGKSRAKFISA-EETTGVTFDDFAGQEYIKRELQEIVRILK 326
+ T + + PL + +G+++ + + GV F D AG K+E++E V LK
Sbjct: 302 IATRMKSIKSPLSMDSFNQMGRAKFTLVDPFDGGRGVLFRDVAGLSEAKQEVKEFVDYLK 361
Query: 327 NDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASR 386
+ E++Q G P+G LL GPPG GKTLLAKA+A EA VPF + NG++F+EM G+ A+R
Sbjct: 362 SPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQVPFLSMNGSEFIEMIGGLGAAR 421
Query: 387 VKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGGGA--EREQGLLQILTEMDGFKVST 444
V+DLF + AP II+IDEIDAIG +R G + G G+ E EQ L Q+L EMDG
Sbjct: 422 VRDLFKEGKKRAPCIIYIDEIDAIGRQRSGTESMGQGSSGESEQTLNQLLVEMDGMATKE 481
Query: 445 SQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDV 504
VL++ +TNR DILD ALLR GRFD+ + + LP+ R I + H + + E
Sbjct: 482 G-VLMLASTNRADILDKALLRPGRFDRHILIDLPTLAERKEIFEKHLSS--VKLESPPTT 538
Query: 505 LLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDST 564
Q +A LT F+GA++ N+ NEA + AR + + L A++R G E + +
Sbjct: 539 FSQRLARLTPGFSGADIANVCNEAALHAARNTQMEVSSKNLEYAVERLVGGTEK-RSHAL 597
Query: 565 DIPEELKLRLAYREAAVAVLACHLPDPYRPIIETDI-KSIRSQPNMRYAEISGRVFSRKN 623
+ E K+ +AY E+ A++ LP+ + T + ++ + +Y ++S K
Sbjct: 598 SLAER-KV-IAYHESGHALVGWMLPNSDILLKVTIVPRTSLALGFAQYTPSEQHLYS-KE 654
Query: 624 DYLNAIVRACAPRVIEEQMFGIDNMCWISSKATLD-ASRLAEFLILQTGMT-AFGKAYYR 681
+ + + A R E +F N ++ L+ +++A I + GM G Y R
Sbjct: 655 ELFDKMCMALGGRAAENLVF---NRITTGAQNDLEKVTKIAYSQIKKFGMNDTLGPIYVR 711
Query: 682 NQSDLVPN----------LATKLEALRDEYMRFAV----EKCASVLREYHSAVETITDIL 727
+ + + +E++ D R V + +L + +E + + L
Sbjct: 712 DADETEGGGAMGSGGKKPFSRAMESMIDNEARHVVASAYQTTEGILTTHRDKLEKLAEAL 771
Query: 728 LEKGEIKAEEIWDIYKKAP 746
LEK + +++ + P
Sbjct: 772 LEKETLDYDQVVQLIGPPP 790
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 543 (196.2 bits), Expect = 1.3e-50, Sum P(2) = 1.3e-50
Identities = 168/442 (38%), Positives = 238/442 (53%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
+ +S+A+ + +TGV F D AG + ELQE+V+ LKN + F GI P GVLL
Sbjct: 411 AFSQSKAE-ARVDGSTGVKFADVAGIDEAVDELQELVKYLKNPDLFDKMGIKPPHGVLLE 469
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPG GKTL+AKAIAGEAGVPF+ G++FVE+ VGV ++R++DLF A+ PS+IFID
Sbjct: 470 GPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFID 529
Query: 406 EIDAIGSKRGG-----PD--IGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDI 458
EIDA+ ++R G D ERE L Q+L E+DGF V+ +GATNR D+
Sbjct: 530 EIDALATRRQGIFKENSDQLYNAATQERETTLNQLLIELDGFDTGKG-VIFLGATNRRDL 588
Query: 459 LDPALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTG 518
LDPALLR GRFD+ +RV P+ GR ILK+HA +K S+ V L A ++G
Sbjct: 589 LDPALLRPGRFDRKIRVRPPNAKGRLDILKIHA-SKVKMSDS---VDLSSYASNLPGWSG 644
Query: 519 AELQNILNEAGILTARKDLDYIGQEELLEALKRQK-GTFETGQEDSTDIPEELKLRLAYR 577
A+L ++ EA ++ RK + I Q ++ +A+ R G G E + + + R A
Sbjct: 645 AKLAQLVQEAALVAVRKTHNSILQSDMDDAVDRLTVGPTRIGLE----LGHQGQCRRATT 700
Query: 578 EAAVAVLACHLPDPYR--PIIETDIKSI--R----SQPNMRYAEISGRVFSRKNDYLNAI 629
E VA+ + HL Y I D SI R SQ + +F R L+ +
Sbjct: 701 EVGVAITS-HLLLRYENAKIERCDRVSIIPRGQTLSQVVFHRLDDESYMFGRLPQLLHRL 759
Query: 630 VRACAPRVIEEQMFGIDNMCWISSKATLD----ASRLAEFLI----LQTGMTAFGKAY-Y 680
R EE ++G D +SKA++D AS LA ++ L+ M G+ +
Sbjct: 760 QVLLGGRAAEEVIYGSD-----TSKASVDYLSDASWLARKILTIWNLENPMVIHGEPPPW 814
Query: 681 RNQSDLV-PNLATKLEALRDEY 701
R + V P L + +L D+Y
Sbjct: 815 RKRPQFVGPRLDFE-GSLYDDY 835
Score = 50 (22.7 bits), Expect = 1.3e-50, Sum P(2) = 1.3e-50
Identities = 19/75 (25%), Positives = 33/75 (44%)
Query: 689 NLATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKK-APQ 747
N+ ++ +E + K S+LR+ +A+ +LL + EI E I I PQ
Sbjct: 845 NMDDEVAHRSEELISQMYNKTVSLLRQNQTALLKTVKVLLNQKEISGEAIDFILDHYPPQ 904
Query: 748 IPQPAVSPVDEYGAL 762
P ++ G+L
Sbjct: 905 TPLNSLLQEQNPGSL 919
>UNIPROTKB|E2R4F3 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 CTD:6687 KO:K09552 OMA:MMDHEAK
EMBL:AAEX03003953 EMBL:AAEX03003954 RefSeq:XP_546777.3
Ensembl:ENSCAFT00000031561 GeneID:489657 KEGG:cfa:489657
NextBio:20862809 Uniprot:E2R4F3
Length = 793
Score = 544 (196.6 bits), Expect = 1.9e-50, P = 1.9e-50
Identities = 160/487 (32%), Positives = 245/487 (50%)
Query: 283 ALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGV 342
A L +R + + GV+F D AG K E++E V LK+ E F G PKG
Sbjct: 286 AFNQLKMARFTIVDGKMGKGVSFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKGA 345
Query: 343 LLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSII 402
LL GPPG GKTLLAKA+A EA VPF A G +FVE+ G+ A+RV+ LF AR+ AP I+
Sbjct: 346 LLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIV 405
Query: 403 FIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPA 462
+IDEIDA+G KR G E EQ L Q+L EMDG +T V+V+ +TNR DILD A
Sbjct: 406 YIDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMG-TTDHVIVLASTNRADILDNA 464
Query: 463 LLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQ 522
LLR GR D+ V + LP+ R I + H ++ + + Q +AELT F+GA++
Sbjct: 465 LLRPGRLDRHVFIDLPTLQERREIFEHHLKS--LKLTQASSFYSQRLAELTPGFSGADIA 522
Query: 523 NILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVA 582
NI NEA + AR+ + A++R T ++ EE K+ +A+ E+ A
Sbjct: 523 NICNEAALHAAREGHTSVHTFNFEYAVERVIAG--TAKKSKILSKEEQKV-VAFHESGHA 579
Query: 583 VLACHLPDPYRPIIETDIKSIRSQPNMRYAEISGR---VFSRKNDYLNAIVRACAPRVIE 639
++ L + +++ I R+ + +A++ R +F+ K + A RV E
Sbjct: 580 LVGWLL-EHTEAVMKVSIAP-RTNAALGFAQMLPRDQHLFT-KEQLFERMCMALGGRVSE 636
Query: 640 EQMFGIDNMCWISSKATL-DASRLAEFLILQTGMT-AFGKAYYRNQSDLVPNLATK---- 693
F N ++ L +R+A ++ Q GM + G + + + + +
Sbjct: 637 TISF---NKVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPISFPEVQEGLTGIGRRPFSQ 693
Query: 694 -LEALRDEYMRFAVEKC----ASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAPQI 748
L+ + D + V K VL++ ++ + + LLEK I E+I + P
Sbjct: 694 GLQQMMDHEAKLLVAKAYRHTEKVLQDNLDKLQALANALLEKEVINYEDIEALIGPPPHG 753
Query: 749 PQPAVSP 755
P+ ++P
Sbjct: 754 PKKMIAP 760
>UNIPROTKB|Q9UQ90 [details] [associations]
symbol:SPG7 "Paraplegin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004222
"metalloendopeptidase activity" evidence=IDA] [GO:0005739
"mitochondrion" evidence=TAS] [GO:0051082 "unfolded protein
binding" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0008233 "peptidase activity" evidence=TAS]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0007399 GO:GO:0031966 GO:GO:0046872
GO:GO:0008219 GO:GO:0051082 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 EMBL:Y16610 EMBL:AF080525
EMBL:AF080511 EMBL:AF080512 EMBL:AF080513 EMBL:AF080514
EMBL:AF080515 EMBL:AF080516 EMBL:AF080517 EMBL:AF080518
EMBL:AF080519 EMBL:AF080520 EMBL:AF080521 EMBL:AF080522
EMBL:AF080523 EMBL:AF080524 EMBL:BC007692 EMBL:BC035929
EMBL:BC036104 EMBL:BC110530 EMBL:BC110531 IPI:IPI00299010
IPI:IPI00398508 RefSeq:NP_003110.1 RefSeq:NP_955399.1
UniGene:Hs.185597 PDB:2QZ4 PDBsum:2QZ4 ProteinModelPortal:Q9UQ90
SMR:Q9UQ90 IntAct:Q9UQ90 STRING:Q9UQ90 MEROPS:M41.006
PhosphoSite:Q9UQ90 DMDM:116242796 PaxDb:Q9UQ90 PRIDE:Q9UQ90
DNASU:6687 Ensembl:ENST00000268704 Ensembl:ENST00000341316
GeneID:6687 KEGG:hsa:6687 UCSC:uc002fni.3 UCSC:uc002fnj.3 CTD:6687
GeneCards:GC16P089574 HGNC:HGNC:11237 MIM:602783 MIM:607259
neXtProt:NX_Q9UQ90 Orphanet:99013 PharmGKB:PA36067
InParanoid:Q9UQ90 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
PhylomeDB:Q9UQ90 ChiTaRS:SPG7 EvolutionaryTrace:Q9UQ90
GenomeRNAi:6687 NextBio:26057 ArrayExpress:Q9UQ90 Bgee:Q9UQ90
CleanEx:HS_SPG7 Genevestigator:Q9UQ90 GermOnline:ENSG00000197912
Uniprot:Q9UQ90
Length = 795
Score = 543 (196.2 bits), Expect = 2.6e-50, P = 2.6e-50
Identities = 159/487 (32%), Positives = 243/487 (49%)
Query: 283 ALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGV 342
A L +R + + GV+F D AG K E++E V LK+ E F G PKG
Sbjct: 286 AFNQLKMARFTIVDGKMGKGVSFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGA 345
Query: 343 LLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSII 402
LL GPPG GKTLLAKA+A EA VPF A G +FVE+ G+ A+RV+ LF AR+ AP I+
Sbjct: 346 LLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIV 405
Query: 403 FIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPA 462
+IDEIDA+G KR G E EQ L Q+L EMDG +T V+V+ +TNR DILD A
Sbjct: 406 YIDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMG-TTDHVIVLASTNRADILDGA 464
Query: 463 LLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQ 522
L+R GR D+ V + LP+ R I + H ++ + + Q +AELT F+GA++
Sbjct: 465 LMRPGRLDRHVFIDLPTLQERREIFEQHLKS--LKLTQSSTFYSQRLAELTPGFSGADIA 522
Query: 523 NILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVA 582
NI NEA + AR+ + A++R T ++ EE K+ +A+ E+ A
Sbjct: 523 NICNEAALHAAREGHTSVHTLNFEYAVERVLAG--TAKKSKILSKEEQKV-VAFHESGHA 579
Query: 583 VLACHLPDPYRPIIETDIKSIRSQPNMRYAEISGR---VFSRKNDYLNAIVRACAPRVIE 639
++ L + +++ I R+ + +A++ R +F+ K + A R E
Sbjct: 580 LVGWML-EHTEAVMKVSITP-RTNAALGFAQMLPRDQHLFT-KEQLFERMCMALGGRASE 636
Query: 640 EQMFGIDNMCWISSKATL-DASRLAEFLILQTGMT-AFGKAYYRNQSDLVPNLATK---- 693
F N ++ L +R+A ++ Q GM G + + + + +
Sbjct: 637 ALSF---NEVTSGAQDDLRKVTRIAYSMVKQFGMAPGIGPISFPEAQEGLMGIGRRPFSQ 693
Query: 694 -LEALRDEYMRFAVEKC----ASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAPQI 748
L+ + D R V K VL++ ++ + + LLEK I E+I + P
Sbjct: 694 GLQQMMDHEARLLVAKAYRHTEKVLQDNLDKLQALANALLEKEVINYEDIEALIGPPPHG 753
Query: 749 PQPAVSP 755
P+ ++P
Sbjct: 754 PKKMIAP 760
>WB|WBGene00021425 [details] [associations]
symbol:ppgn-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
KO:K09552 EMBL:FO080872 EMBL:AB257343 RefSeq:NP_500191.3
UniGene:Cel.12073 ProteinModelPortal:G5EDB6 SMR:G5EDB6
MEROPS:M41.A12 EnsemblMetazoa:Y38F2AR.7.1
EnsemblMetazoa:Y38F2AR.7.2 GeneID:177021 KEGG:cel:CELE_Y38F2AR.7
CTD:177021 WormBase:Y38F2AR.7 OMA:DKISWSE NextBio:895012
Uniprot:G5EDB6
Length = 747
Score = 529 (191.3 bits), Expect = 5.0e-49, P = 5.0e-49
Identities = 153/461 (33%), Positives = 232/461 (50%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTL 354
+ ++ + F D AG K E++E V LKN F G P+G LL GPPG GKTL
Sbjct: 274 VEGKKQLKIKFKDVAGCSEAKVEIREFVDYLKNPGRFTKLGAKLPRGALLTGPPGCGKTL 333
Query: 355 LAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKR 414
LAKA+A E+ VPF + NG++FVE+ G+ ASR++ LF ARS AP II+IDEIDAIG KR
Sbjct: 334 LAKALAAESTVPFISMNGSEFVEVIGGLGASRIRGLFKEARSRAPCIIYIDEIDAIGRKR 393
Query: 415 G-----GPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRF 469
G GGG E EQ L Q+L EMDG S + V+V+ +TNR D+LD ALLR GRF
Sbjct: 394 SEGAGAGGGFGGGSGEEEQTLNQLLVEMDGMG-SGNGVVVLASTNRADVLDKALLRPGRF 452
Query: 470 DKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAG 529
D+ + + LP+ R + +++ R + + Q +A LT FTGA++ N+ NE+
Sbjct: 453 DRHISIDLPTVLERKDMFELYMRK--IKLDHAPQEYSQRLAALTPGFTGADIMNVCNESA 510
Query: 530 ILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLACHLP 589
I A + +++ AL R ++ S + EE + +AY EA A++ L
Sbjct: 511 IRAASNKCHVVTHKDMEYALDR---VLAGSEKRSRSLVEEEREVVAYHEAGHALVGWMLE 567
Query: 590 DPYRPIIETDIKSIRSQPNMRYAEISGR---VFSRKNDYLNAIVRACAPRVIEEQMFGID 646
+ T I R+ + +A+ S R +FS K++ + + R E FG
Sbjct: 568 HTDALLKVTIIP--RTSAALGFAQYSPRDKHLFS-KDELFDRMCMMLGGRCAENLKFGR- 623
Query: 647 NMCWISSKATLDASRLAEFLILQT---GMTAF-GKAYYRNQSDL-VPNLATKLEALRDEY 701
+S A D ++ + Q GM++ G + N + + K + D+
Sbjct: 624 ----ATSGAQDDLQKVTKSAYAQVKLYGMSSIVGPLSFPNTEGFQIKPYSKKFASTFDQE 679
Query: 702 MRFAVEKC----ASVLREYHSAVETITDILLEKGEIKAEEI 738
V K +++ +ETI LL++ + E++
Sbjct: 680 ATLIVAKANEATTDLIKNNMDKLETIAQALLKREVLNYEDV 720
>MGI|MGI:2385906 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0008089
"anterograde axon cargo transport" evidence=IMP] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 MGI:MGI:2385906 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0030155 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0007155 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 MEROPS:M41.006
CTD:6687 KO:K09552 ChiTaRS:SPG7 EMBL:AF512565 EMBL:AF547215
EMBL:AK145540 EMBL:BC024466 EMBL:BC024986 EMBL:BC051051
EMBL:BC096690 IPI:IPI00170128 RefSeq:NP_694816.3 UniGene:Mm.292075
ProteinModelPortal:Q3ULF4 SMR:Q3ULF4 STRING:Q3ULF4
PhosphoSite:Q3ULF4 PaxDb:Q3ULF4 PRIDE:Q3ULF4
Ensembl:ENSMUST00000108868 GeneID:234847 KEGG:mmu:234847
UCSC:uc009nud.1 InParanoid:Q3ULF4 NextBio:382391 Bgee:Q3ULF4
CleanEx:MM_SPG7 Genevestigator:Q3ULF4 Uniprot:Q3ULF4
Length = 781
Score = 530 (191.6 bits), Expect = 8.2e-49, P = 8.2e-49
Identities = 156/489 (31%), Positives = 243/489 (49%)
Query: 283 ALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGV 342
A L +R + + GV+F D AG K E++E V LK+ E F G PKG
Sbjct: 286 AFNQLKMARFTIVDGKTGKGVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGA 345
Query: 343 LLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSII 402
LL GPPG GKTLLAKA+A EA VPF A G +FVE+ G+ A+RV+ LF AR+ AP I+
Sbjct: 346 LLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIV 405
Query: 403 FIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPA 462
+IDEIDA+G KR G E EQ L Q+L EMDG +T V+V+ +TNR D+LD A
Sbjct: 406 YIDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMG-TTDHVIVLASTNRADVLDNA 464
Query: 463 LLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQ 522
L+R GR D+ V + LP+ R I + H + + + Q +AELT F+GA++
Sbjct: 465 LMRPGRLDRHVFIDLPTLQERREIFEQHLKG--LKLTQPSSFYSQRLAELTPGFSGADIA 522
Query: 523 NILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVA 582
NI NEA + AR+ + A++R T ++ EE ++ +A+ E+ A
Sbjct: 523 NICNEAALHAAREGHTSVHTFNFEYAVERVIAG--TAKKSKILSKEEQRV-VAFHESGHA 579
Query: 583 VLACHLPDPYRPIIETDIKSIRSQPNMRYAEISGR---VFSRKNDYLNAIVRACAPRVIE 639
++ L + +++ I R+ + ++++ R +F+ K + A R E
Sbjct: 580 LVGWLL-EHTEAVMKVSIAP-RTNAALGFSQMLPRDQYLFT-KEQLFERMCMALGGRAAE 636
Query: 640 EQMFGIDNMCWISSKATLD---ASRLAEFLILQTGMT-AFGKAYYRNQSDLVPNLATK-- 693
F ++S A D +R+A ++ Q GM + G + + + + +
Sbjct: 637 AISFSR-----VTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPVSFPEAQEGLMGIGRRPF 691
Query: 694 ---LEALRDEYMRFAVEKC----ASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
L+ + D + V K VL + ++ + + LLEK I E+I + P
Sbjct: 692 SQGLQQMMDHEAKLLVAKAYRHTEKVLLDNLDKLQALANALLEKEVINYEDIEALIGPPP 751
Query: 747 QIPQPAVSP 755
P+ ++P
Sbjct: 752 HGPKKMIAP 760
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 488 (176.8 bits), Expect = 3.7e-48, Sum P(2) = 3.7e-48
Identities = 110/271 (40%), Positives = 162/271 (59%)
Query: 299 ETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAK 357
E VT++D G E +KRELQE+V+ +++ ++F G+ KGVL +GPPG GKTLLAK
Sbjct: 202 EVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 261
Query: 358 AIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGP 417
AIA E F + G + + M+ G + + V+++F AR AP ++F DE+D+I RGG
Sbjct: 262 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG- 320
Query: 418 DIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGL 477
+IG GG ++ + QILTEMDG + V +IGATNR DI+DPA+LR GR D+++ + L
Sbjct: 321 NIGDGGGAADRVINQILTEMDGMSTKKN-VFIIGATNRPDIIDPAILRPGRLDQLIYIPL 379
Query: 478 PSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDL 537
P + R AILK + R +S KDV L +A++T F+GA+L I A L R+ +
Sbjct: 380 PDEKSRVAILKANLR----KSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESI 435
Query: 538 DYIGQEELLEALKRQKGTFETGQEDSTDIPE 568
+ E+ +RQ E+ +PE
Sbjct: 436 E----SEIRRERERQTNPSAMEVEEDDPVPE 462
Score = 273 (101.2 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 67/179 (37%), Positives = 101/179 (56%)
Query: 371 NGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGL 430
+G + + G + S ++ F A AP+IIFIDE+DAI KR + G ER +
Sbjct: 2 SGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKTHGEVERRI-V 57
Query: 431 LQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKDGRFAILKVH 490
Q+LT MDG K + V+V+ ATNR + +DPAL R GRFD+ V +G+P GR IL++H
Sbjct: 58 SQLLTLMDGLK-QRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIH 116
Query: 491 ARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIG-QEELLEA 548
+N DV L+++ T GA+L + +EA + RK +D I ++E ++A
Sbjct: 117 TKNMKLAD----DVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 171
Score = 44 (20.5 bits), Expect = 3.7e-48, Sum P(2) = 3.7e-48
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 825 ASMEVEEDNQKPQLLMASHF 844
++MEVEED+ P++ HF
Sbjct: 450 SAMEVEEDDPVPEI-RRDHF 468
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 489 (177.2 bits), Expect = 7.6e-48, Sum P(2) = 7.6e-48
Identities = 106/252 (42%), Positives = 157/252 (62%)
Query: 303 VTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAG 361
+TFD G REL+E++ + LKN E FQ GI PKGVLL+GPPGTGKTLLAKA+A
Sbjct: 178 ITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAA 237
Query: 362 EAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGG 421
G F + + V+ ++G +A ++++FA A+ P IIF+DE+DAIG +R G
Sbjct: 238 TIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSE---G 294
Query: 422 GGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPS 479
A+RE + L+++LT+MDGF + Q +I ATNR D LDPALLR GR D+ V + LP+
Sbjct: 295 TSADREIQRTLMELLTQMDGFD-NLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPN 353
Query: 480 KDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDY 539
+ GR I K+H + E D + ++++ F GA+++N EAG R D D+
Sbjct: 354 EAGRLEIFKIHTAK--VKKTGEFD--FEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDH 409
Query: 540 IGQEELLEALKR 551
I ++L++A+++
Sbjct: 410 INPDDLMKAVRK 421
Score = 40 (19.1 bits), Expect = 7.6e-48, Sum P(2) = 7.6e-48
Identities = 14/66 (21%), Positives = 25/66 (37%)
Query: 131 DPENSHRIDFSDFWKLLNSNSVQYMEYSNYGQTVSVILPYYKDAKVEGKEGNPGKDIIYR 190
D R + D KL + + GQ + ++ + K K + + I+
Sbjct: 72 DQLKQRRQNIRDLEKLYDKTENDIKALQSIGQLIGEVMKELSEEKYIVKASSGPRYIVGV 131
Query: 191 RHVVDR 196
R+ VDR
Sbjct: 132 RNSVDR 137
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 505 (182.8 bits), Expect = 8.2e-48, P = 8.2e-48
Identities = 109/261 (41%), Positives = 163/261 (62%)
Query: 290 SRAKFISAEETTGVTFDDFAGQEYIKRELQE-IVRILKNDEEFQNKGIYCPKGVLLHGPP 348
SR K + +E + D G + +EL E IV + + E+F+N GI PKGVL++GPP
Sbjct: 135 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 194
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLA+A A + F G V+MF+G A V+D F+ A+ APSIIFIDE+D
Sbjct: 195 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELD 254
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR + G E ++ +L++L ++DGF+ T+QV VI ATNR+DILDPALLR GR
Sbjct: 255 AIGNKRFDSE-KAGDREVQRTMLELLNQLDGFQ-PTTQVKVIAATNRVDILDPALLRSGR 312
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + +P+++ R I+++H+R + DV +E+A T+DF GA+ + + EA
Sbjct: 313 LDRKIEFPMPNEEARARIMQIHSR----KMNVSPDVNYEELARCTDDFNGAQCKAVCVEA 368
Query: 529 GILTARKDLDYIGQEELLEAL 549
GI+ R+ + E+ +E +
Sbjct: 369 GIIALRRGATELTHEDYMEGI 389
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 504 (182.5 bits), Expect = 1.1e-47, P = 1.1e-47
Identities = 109/261 (41%), Positives = 163/261 (62%)
Query: 290 SRAKFISAEETTGVTFDDFAGQEYIKRELQE-IVRILKNDEEFQNKGIYCPKGVLLHGPP 348
SR K + +E + D G + +EL E IV + + E+F+N GI PKGVL++GPP
Sbjct: 116 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 175
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLA+A A + F G V+MF+G A V+D FA A+ APSIIFIDE+D
Sbjct: 176 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 235
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR + G E ++ +L++L ++DGF+ +T QV VI ATNR+DILDPALLR GR
Sbjct: 236 AIGTKRFDSE-KAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPALLRSGR 293
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + +P+++ R I+++H+R + DV +E+A T+DF GA+ + + EA
Sbjct: 294 LDRKIEFPMPNEEARARIMQIHSR----KMNVSPDVNYEELARCTDDFNGAQCKAVCVEA 349
Query: 529 GILTARKDLDYIGQEELLEAL 549
G++ R+ + E+ +E +
Sbjct: 350 GMIALRRGATELTHEDYMEGI 370
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 504 (182.5 bits), Expect = 1.1e-47, P = 1.1e-47
Identities = 109/261 (41%), Positives = 163/261 (62%)
Query: 290 SRAKFISAEETTGVTFDDFAGQEYIKRELQE-IVRILKNDEEFQNKGIYCPKGVLLHGPP 348
SR K + +E + D G + +EL E IV + + E+F+N GI PKGVL++GPP
Sbjct: 120 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 179
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLA+A A + F G V+MF+G A V+D FA A+ APSIIFIDE+D
Sbjct: 180 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 239
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR + G E ++ +L++L ++DGF+ +T QV VI ATNR+DILDPALLR GR
Sbjct: 240 AIGTKRFDSE-KAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPALLRSGR 297
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + +P+++ R I+++H+R + DV +E+A T+DF GA+ + + EA
Sbjct: 298 LDRKIEFPMPNEEARARIMQIHSR----KMNVSPDVNYEELARCTDDFNGAQCKAVCVEA 353
Query: 529 GILTARKDLDYIGQEELLEAL 549
G++ R+ + E+ +E +
Sbjct: 354 GMIALRRGATELTHEDYMEGI 374
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 504 (182.5 bits), Expect = 1.1e-47, P = 1.1e-47
Identities = 109/261 (41%), Positives = 163/261 (62%)
Query: 290 SRAKFISAEETTGVTFDDFAGQEYIKRELQE-IVRILKNDEEFQNKGIYCPKGVLLHGPP 348
SR K + +E + D G + +EL E IV + + E+F+N GI PKGVL++GPP
Sbjct: 170 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 229
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLA+A A + F G V+MF+G A V+D FA A+ APSIIFIDE+D
Sbjct: 230 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 289
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR + G E ++ +L++L ++DGF+ +T QV VI ATNR+DILDPALLR GR
Sbjct: 290 AIGTKRFDSE-KAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPALLRSGR 347
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + +P+++ R I+++H+R + DV +E+A T+DF GA+ + + EA
Sbjct: 348 LDRKIEFPMPNEEARARIMQIHSR----KMNVSPDVNYEELARCTDDFNGAQCKAVCVEA 403
Query: 529 GILTARKDLDYIGQEELLEAL 549
G++ R+ + E+ +E +
Sbjct: 404 GMIALRRGATELTHEDYMEGI 424
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 504 (182.5 bits), Expect = 1.1e-47, P = 1.1e-47
Identities = 109/261 (41%), Positives = 163/261 (62%)
Query: 290 SRAKFISAEETTGVTFDDFAGQEYIKRELQE-IVRILKNDEEFQNKGIYCPKGVLLHGPP 348
SR K + +E + D G + +EL E IV + + E+F+N GI PKGVL++GPP
Sbjct: 128 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 187
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLA+A A + F G V+MF+G A V+D FA A+ APSIIFIDE+D
Sbjct: 188 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 247
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR + G E ++ +L++L ++DGF+ +T QV VI ATNR+DILDPALLR GR
Sbjct: 248 AIGTKRFDSE-KAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPALLRSGR 305
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + +P+++ R I+++H+R + DV +E+A T+DF GA+ + + EA
Sbjct: 306 LDRKIEFPMPNEEARARIMQIHSR----KMNVSPDVNYEELARCTDDFNGAQCKAVCVEA 361
Query: 529 GILTARKDLDYIGQEELLEAL 549
G++ R+ + E+ +E +
Sbjct: 362 GMIALRRGATELTHEDYMEGI 382
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 504 (182.5 bits), Expect = 1.1e-47, P = 1.1e-47
Identities = 109/261 (41%), Positives = 163/261 (62%)
Query: 290 SRAKFISAEETTGVTFDDFAGQEYIKRELQE-IVRILKNDEEFQNKGIYCPKGVLLHGPP 348
SR K + +E + D G + +EL E IV + + E+F+N GI PKGVL++GPP
Sbjct: 170 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 229
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLA+A A + F G V+MF+G A V+D FA A+ APSIIFIDE+D
Sbjct: 230 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 289
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR + G E ++ +L++L ++DGF+ +T QV VI ATNR+DILDPALLR GR
Sbjct: 290 AIGTKRFDSE-KAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPALLRSGR 347
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + +P+++ R I+++H+R + DV +E+A T+DF GA+ + + EA
Sbjct: 348 LDRKIEFPMPNEEARARIMQIHSR----KMNVSPDVNYEELARCTDDFNGAQCKAVCVEA 403
Query: 529 GILTARKDLDYIGQEELLEAL 549
G++ R+ + E+ +E +
Sbjct: 404 GMIALRRGATELTHEDYMEGI 424
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 504 (182.5 bits), Expect = 1.1e-47, P = 1.1e-47
Identities = 109/261 (41%), Positives = 163/261 (62%)
Query: 290 SRAKFISAEETTGVTFDDFAGQEYIKRELQE-IVRILKNDEEFQNKGIYCPKGVLLHGPP 348
SR K + +E + D G + +EL E IV + + E+F+N GI PKGVL++GPP
Sbjct: 177 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 236
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLA+A A + F G V+MF+G A V+D FA A+ APSIIFIDE+D
Sbjct: 237 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 296
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR + G E ++ +L++L ++DGF+ +T QV VI ATNR+DILDPALLR GR
Sbjct: 297 AIGTKRFDSE-KAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPALLRSGR 354
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + +P+++ R I+++H+R + DV +E+A T+DF GA+ + + EA
Sbjct: 355 LDRKIEFPMPNEEARARIMQIHSR----KMNVSPDVNYEELARCTDDFNGAQCKAVCVEA 410
Query: 529 GILTARKDLDYIGQEELLEAL 549
G++ R+ + E+ +E +
Sbjct: 411 GMIALRRGATELTHEDYMEGI 431
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 504 (182.5 bits), Expect = 1.1e-47, P = 1.1e-47
Identities = 109/261 (41%), Positives = 163/261 (62%)
Query: 290 SRAKFISAEETTGVTFDDFAGQEYIKRELQE-IVRILKNDEEFQNKGIYCPKGVLLHGPP 348
SR K + +E + D G + +EL E IV + + E+F+N GI PKGVL++GPP
Sbjct: 173 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 232
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLA+A A + F G V+MF+G A V+D FA A+ APSIIFIDE+D
Sbjct: 233 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 292
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR + G E ++ +L++L ++DGF+ +T QV VI ATNR+DILDPALLR GR
Sbjct: 293 AIGTKRFDSE-KAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPALLRSGR 350
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + +P+++ R I+++H+R + DV +E+A T+DF GA+ + + EA
Sbjct: 351 LDRKIEFPMPNEEARARIMQIHSR----KMNVSPDVNYEELARCTDDFNGAQCKAVCVEA 406
Query: 529 GILTARKDLDYIGQEELLEAL 549
G++ R+ + E+ +E +
Sbjct: 407 GMIALRRGATELTHEDYMEGI 427
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 504 (182.5 bits), Expect = 1.1e-47, P = 1.1e-47
Identities = 109/261 (41%), Positives = 163/261 (62%)
Query: 290 SRAKFISAEETTGVTFDDFAGQEYIKRELQE-IVRILKNDEEFQNKGIYCPKGVLLHGPP 348
SR K + +E + D G + +EL E IV + + E+F+N GI PKGVL++GPP
Sbjct: 170 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 229
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLA+A A + F G V+MF+G A V+D FA A+ APSIIFIDE+D
Sbjct: 230 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 289
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR + G E ++ +L++L ++DGF+ +T QV VI ATNR+DILDPALLR GR
Sbjct: 290 AIGTKRFDSE-KAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPALLRSGR 347
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + +P+++ R I+++H+R + DV +E+A T+DF GA+ + + EA
Sbjct: 348 LDRKIEFPMPNEEARARIMQIHSR----KMNVSPDVNYEELARCTDDFNGAQCKAVCVEA 403
Query: 529 GILTARKDLDYIGQEELLEAL 549
G++ R+ + E+ +E +
Sbjct: 404 GMIALRRGATELTHEDYMEGI 424
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 504 (182.5 bits), Expect = 1.1e-47, P = 1.1e-47
Identities = 109/261 (41%), Positives = 163/261 (62%)
Query: 290 SRAKFISAEETTGVTFDDFAGQEYIKRELQE-IVRILKNDEEFQNKGIYCPKGVLLHGPP 348
SR K + +E + D G + +EL E IV + + E+F+N GI PKGVL++GPP
Sbjct: 173 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 232
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLA+A A + F G V+MF+G A V+D FA A+ APSIIFIDE+D
Sbjct: 233 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 292
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR + G E ++ +L++L ++DGF+ +T QV VI ATNR+DILDPALLR GR
Sbjct: 293 AIGTKRFDSE-KAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPALLRSGR 350
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + +P+++ R I+++H+R + DV +E+A T+DF GA+ + + EA
Sbjct: 351 LDRKIEFPMPNEEARARIMQIHSR----KMNVSPDVNYEELARCTDDFNGAQCKAVCVEA 406
Query: 529 GILTARKDLDYIGQEELLEAL 549
G++ R+ + E+ +E +
Sbjct: 407 GMIALRRGATELTHEDYMEGI 427
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 483 (175.1 bits), Expect = 2.2e-47, Sum P(2) = 2.2e-47
Identities = 105/261 (40%), Positives = 158/261 (60%)
Query: 290 SRAKFISAEETTGVTFDDFAG-QEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPP 348
+R K + E + D G + I+ ++ IV + + E+F+ GI PKGVL+HGPP
Sbjct: 170 NRVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPP 229
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLA+A A + F G V+MF+G A V+D F A+ AP+IIFIDE+D
Sbjct: 230 GTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELD 289
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR ++ G E ++ +L++L ++DGF + V VI ATNR D LDPALLR GR
Sbjct: 290 AIGTKRFDSELSGD-REVQRTMLELLNQLDGFSTDDT-VKVIAATNRPDTLDPALLRSGR 347
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + + P+++ R IL++H+R + KDV +E+A T+DF GA+L+ + EA
Sbjct: 348 LDRKIELPHPNEESRARILQIHSR----KMNVHKDVNFEELARSTDDFNGAQLKAVCVEA 403
Query: 529 GILTARKDLDYIGQEELLEAL 549
G++ R+ I E+ +E +
Sbjct: 404 GMIALRRGATEIDHEDFVEGI 424
Score = 42 (19.8 bits), Expect = 2.2e-47, Sum P(2) = 2.2e-47
Identities = 15/74 (20%), Positives = 36/74 (48%)
Query: 88 QRINKLEELDRKANVQLERQLVLASEWSRVLMTMCGRLKGT-----ELDPENSHRIDFSD 142
+ +N +EE+++ +N +++ ++ L ++L RLK E +N +I +
Sbjct: 10 EEVN-VEEIEKLSNSEIKTRVSLIDTEIKILKNEHARLKNEYKNLQEKIKDNVEKIHLNK 68
Query: 143 FWKLLNSNSVQYME 156
L +N V+ ++
Sbjct: 69 MLPYLVANVVESLD 82
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 483 (175.1 bits), Expect = 2.2e-47, Sum P(2) = 2.2e-47
Identities = 105/261 (40%), Positives = 158/261 (60%)
Query: 290 SRAKFISAEETTGVTFDDFAG-QEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPP 348
+R K + E + D G + I+ ++ IV + + E+F+ GI PKGVL+HGPP
Sbjct: 170 NRVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPP 229
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLA+A A + F G V+MF+G A V+D F A+ AP+IIFIDE+D
Sbjct: 230 GTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELD 289
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR ++ G E ++ +L++L ++DGF + V VI ATNR D LDPALLR GR
Sbjct: 290 AIGTKRFDSELSGD-REVQRTMLELLNQLDGFSTDDT-VKVIAATNRPDTLDPALLRSGR 347
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + + P+++ R IL++H+R + KDV +E+A T+DF GA+L+ + EA
Sbjct: 348 LDRKIELPHPNEESRARILQIHSR----KMNVHKDVNFEELARSTDDFNGAQLKAVCVEA 403
Query: 529 GILTARKDLDYIGQEELLEAL 549
G++ R+ I E+ +E +
Sbjct: 404 GMIALRRGATEIDHEDFVEGI 424
Score = 42 (19.8 bits), Expect = 2.2e-47, Sum P(2) = 2.2e-47
Identities = 15/74 (20%), Positives = 36/74 (48%)
Query: 88 QRINKLEELDRKANVQLERQLVLASEWSRVLMTMCGRLKGT-----ELDPENSHRIDFSD 142
+ +N +EE+++ +N +++ ++ L ++L RLK E +N +I +
Sbjct: 10 EEVN-VEEIEKLSNSEIKTRVSLIDTEIKILKNEHARLKNEYKNLQEKIKDNVEKIHLNK 68
Query: 143 FWKLLNSNSVQYME 156
L +N V+ ++
Sbjct: 69 MLPYLVANVVESLD 82
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 501 (181.4 bits), Expect = 2.3e-47, P = 2.3e-47
Identities = 107/261 (40%), Positives = 162/261 (62%)
Query: 290 SRAKFISAEETTGVTFDDFAG-QEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPP 348
SR K + +E + D G + I+ ++ +V +K ++F+N GI PKG L++GPP
Sbjct: 184 SRVKAMEVDEKPTEDYSDIGGLDKQIEELIEAVVLPMKQADKFKNLGIKPPKGALMYGPP 243
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLA+A A ++G F V+MF+G A V+D FA A+ AP+IIFIDE+D
Sbjct: 244 GTGKTLLARACAAQSGATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKAPTIIFIDELD 303
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR D G E ++ +L++L ++DGF S +V V+ ATNR+D LDPALLR GR
Sbjct: 304 AIGTKRFDSD-KSGDREVQRTMLELLNQLDGFG-SDDRVKVLAATNRVDTLDPALLRSGR 361
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + LPS++ R ++LK+HAR + + V +E+A T++F GA+L+ + EA
Sbjct: 362 LDRKIEFPLPSEEARESVLKIHARKLHC---DNNSVNWRELARSTDEFNGAQLKAVTVEA 418
Query: 529 GILTARKDLDYIGQEELLEAL 549
G++ R I E+ +EA+
Sbjct: 419 GMIALRNGKSIIKHEDFVEAI 439
>ZFIN|ZDB-GENE-030131-5391 [details] [associations]
symbol:spg7 "spastic paraplegia 7" species:7955
"Danio rerio" [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382
ZFIN:ZDB-GENE-030131-5391 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:6687 KO:K09552 OMA:MMDHEAK EMBL:AL954648 EMBL:BX470191
IPI:IPI00483001 RefSeq:XP_001923118.1 UniGene:Dr.105782
Ensembl:ENSDART00000098438 GeneID:794740 KEGG:dre:794740
NextBio:20931970 Uniprot:E7F2S4
Length = 788
Score = 518 (187.4 bits), Expect = 2.5e-47, P = 2.5e-47
Identities = 154/486 (31%), Positives = 241/486 (49%)
Query: 283 ALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGV 342
A L ++ + + GV+F D AG K E++E V LKN + + G PKG
Sbjct: 277 AFNQLKMAKFTIVDGKSGKGVSFKDVAGMREAKMEVKEFVDYLKNPDRYLQLGAKVPKGS 336
Query: 343 LLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSII 402
LL GPPG GKTLLAKA+A EA VPF A G++FVE+ G+ A+RV+ LF AR+ AP I+
Sbjct: 337 LLLGPPGCGKTLLAKAVATEAQVPFLAMAGSEFVEVIGGLGAARVRSLFKEARARAPCIV 396
Query: 403 FIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPA 462
+IDEIDA+G KR G E EQ L Q+L EMDG +T V+V+ +TNR DILD A
Sbjct: 397 YIDEIDAVGKKRSTNMSGFSNTEEEQTLNQLLVEMDGMG-TTDHVIVLASTNRADILDNA 455
Query: 463 LLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQ 522
L+R GR D+ + + LP+ R I + H K + + D +AELT F+GA++
Sbjct: 456 LMRPGRLDRHIFIDLPTLQERKEIFEQHL--KILKLTQPADFYSLRLAELTPGFSGADIA 513
Query: 523 NILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVA 582
NI NEA + AR+ I A++R + S + +E + +A+ E+ A
Sbjct: 514 NICNEAALHAAREGFKSIDTFSFEYAVER---VIAGSVKKSKILSKEEQRVVAFHESGHA 570
Query: 583 VLACHLPDPYRPIIETDIKSIRSQPNMRYAEISGR---VFSRKNDYLNAIVRACAPRVIE 639
++ L + +++ I R+ + +A+I R +F+ K + A R E
Sbjct: 571 LVGWLL-EHTEAVMKVSIAP-RTNAALGFAQILPRDQFLFT-KEQLFERMCMALGGRASE 627
Query: 640 EQMFGIDNMCWISSKATL-DASRLAEFLILQTGMT-AFGKAYY---RNQSDLVPN-LATK 693
F N ++ L +R+A ++ Q GM + G+ + NQS + +
Sbjct: 628 AITF---NKVTTGAQDDLRKVTRVAYSMVKQYGMVDSVGQVSFPDSENQSGIGRRPFSQG 684
Query: 694 LEALRDEYMRFAVEKC----ASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAPQIP 749
L+ D + + K +L + + + + LLE+ + +I + P P
Sbjct: 685 LQQQMDLEAKMLIAKAYRHTEKLLLDNRDKLILLANALLEREVVNYNDIEALLGPPPFGP 744
Query: 750 QPAVSP 755
+ ++P
Sbjct: 745 KRMIAP 750
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 498 (180.4 bits), Expect = 4.9e-47, P = 4.9e-47
Identities = 102/261 (39%), Positives = 164/261 (62%)
Query: 290 SRAKFISAEETTGVTFDDFAG-QEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPP 348
SR K + +E + D G + I+ ++ +V + + + F N GI+ PKGVL++GPP
Sbjct: 161 SRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPP 220
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKT++A+A+A + F G V+MF+G A V+D FA A+ AP+IIFIDE+D
Sbjct: 221 GTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 280
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR + G E ++ +L++L ++DGF+ + + VI ATNR+D+LDPALLR GR
Sbjct: 281 AIGTKRFDSE-KAGDREVQRTMLELLNQLDGFQPN-DDIKVIAATNRIDVLDPALLRSGR 338
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + + P++D R I+++H+R + KDV +E+A T+DF GA+ + + EA
Sbjct: 339 LDRKIELPHPNEDARARIMQIHSR----KMNVNKDVNFEELARCTDDFNGAQCKAVCVEA 394
Query: 529 GILTARKDLDYIGQEELLEAL 549
G++ R+D I E+ ++A+
Sbjct: 395 GMIALRRDATEILHEDFMDAI 415
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 498 (180.4 bits), Expect = 4.9e-47, P = 4.9e-47
Identities = 102/261 (39%), Positives = 164/261 (62%)
Query: 290 SRAKFISAEETTGVTFDDFAG-QEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPP 348
SR K + +E + D G + I+ ++ +V + + + F N GI+ PKGVL++GPP
Sbjct: 161 SRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPP 220
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKT++A+A+A + F G V+MF+G A V+D FA A+ AP+IIFIDE+D
Sbjct: 221 GTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 280
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR + G E ++ +L++L ++DGF+ + + VI ATNR+D+LDPALLR GR
Sbjct: 281 AIGTKRFDSE-KAGDREVQRTMLELLNQLDGFQPN-DDIKVIAATNRIDVLDPALLRSGR 338
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + + P++D R I+++H+R + KDV +E+A T+DF GA+ + + EA
Sbjct: 339 LDRKIELPHPNEDARARIMQIHSR----KMNVNKDVNFEELARCTDDFNGAQCKAVCVEA 394
Query: 529 GILTARKDLDYIGQEELLEAL 549
G++ R+D I E+ ++A+
Sbjct: 395 GMIALRRDATEILHEDFMDAI 415
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 497 (180.0 bits), Expect = 6.3e-47, P = 6.3e-47
Identities = 108/261 (41%), Positives = 162/261 (62%)
Query: 290 SRAKFISAEETTGVTFDDFAGQEYIKRELQE-IVRILKNDEEFQNKGIYCPKGVLLHGPP 348
SR K + +E + D G + +EL E IV + + E+F+N GI PKGVL++GPP
Sbjct: 158 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 217
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLA+A A + F G V+MF+G A V+D FA A+ APSIIFIDE+D
Sbjct: 218 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 277
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR + G E ++ +L++L ++DGF+ + QV VI ATNR+DILDPALLR GR
Sbjct: 278 AIGTKRFDSE-KAGDREVQRTMLELLNQLDGFQPNM-QVKVIAATNRVDILDPALLRSGR 335
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + +P+++ R I+++H+R + DV +E+A T+DF GA+ + + EA
Sbjct: 336 LDRKIEFPMPNEEARARIMQIHSR----KMNVCPDVNFEELARCTDDFNGAQCKAVCVEA 391
Query: 529 GILTARKDLDYIGQEELLEAL 549
G++ R+ + E+ +E +
Sbjct: 392 GMIALRRGATELNHEDYMEGI 412
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 480 (174.0 bits), Expect = 7.8e-47, Sum P(2) = 7.8e-47
Identities = 101/258 (39%), Positives = 164/258 (63%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+ E+ T+D G + +E++E++ + +K+ E F++ GI PKGVLL+GPPGTGKT
Sbjct: 150 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 209
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+A+A F +G++ V+ ++G + V++LF AR APSIIF+DEID+IGS
Sbjct: 210 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 269
Query: 414 RGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIV 473
R G G +E ++ +L++L ++DGF+ S +++ V+ ATNR+DILD ALLR GR D+ +
Sbjct: 270 RMESGSGNGDSEVQRTMLELLNQLDGFEAS-NKIKVLMATNRIDILDQALLRPGRIDRKI 328
Query: 474 RVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTA 533
P+++ RF ILK+H+R + + L++IAE +GAEL+ + EAG+
Sbjct: 329 EFPNPNEESRFDILKIHSRKMNLM----RGIDLKKIAEKMNGASGAELKAVCTEAGMFAL 384
Query: 534 RKDLDYIGQEELLEALKR 551
R+ ++ QE+ A+ +
Sbjct: 385 RERRVHVTQEDFEMAVAK 402
Score = 40 (19.1 bits), Expect = 7.8e-47, Sum P(2) = 7.8e-47
Identities = 28/113 (24%), Positives = 48/113 (42%)
Query: 77 QLFEKLKEAERQRINKLEELDRKANV------QLERQLVLASE-WSRV--LMTMCGRLKG 127
Q +L+ RQ+ N L L+ + N L +L L E S V ++ + G+ K
Sbjct: 38 QHIHELQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKV 97
Query: 128 -TELDPENSHRIDFS---DFWKLLNSNSVQYMEYSNYGQTVSVILPYYKDAKV 176
++ PE + +D D K+ S V + +Y + ++LP D V
Sbjct: 98 LVKVHPEGKYVVDIDKSIDITKITPSTRVA-LRNDSY--VLHLVLPSKVDPLV 147
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 496 (179.7 bits), Expect = 8.1e-47, P = 8.1e-47
Identities = 106/261 (40%), Positives = 160/261 (61%)
Query: 290 SRAKFISAEETTGVTFDDFAGQEYIKRELQE-IVRILKNDEEFQNKGIYCPKGVLLHGPP 348
SR K + +E T+ D G + EL E IV +K ++F++ GI PKG L++GPP
Sbjct: 165 SRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPP 224
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLA+A A + F V+M++G A V+D FA A+ AP+IIFIDE+D
Sbjct: 225 GTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELD 284
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR + G E ++ +L++L ++DGF S +V V+ ATNR+D+LDPALLR GR
Sbjct: 285 AIGTKRFDSE-KSGDREVQRTMLELLNQLDGFS-SDDRVKVLAATNRVDVLDPALLRSGR 342
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + LPS+D R IL++H+R + + D+ QE+A T++F GA+L+ + EA
Sbjct: 343 LDRKIEFPLPSEDSRAQILQIHSR----KMTTDDDINWQELARSTDEFNGAQLKAVTVEA 398
Query: 529 GILTARKDLDYIGQEELLEAL 549
G++ R + E+ +E +
Sbjct: 399 GMIALRNGQSSVKHEDFVEGI 419
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 496 (179.7 bits), Expect = 8.1e-47, P = 8.1e-47
Identities = 108/261 (41%), Positives = 158/261 (60%)
Query: 290 SRAKFISAEETTGVTFDDFAGQEYIKRELQE-IVRILKNDEEFQNKGIYCPKGVLLHGPP 348
SR K + +E ++D G E +EL E IV + + E F+ G+ PKGVLL+GPP
Sbjct: 155 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPP 214
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTL+A+A A + F G V+MF+G A V+D F A+ AP IIFIDEID
Sbjct: 215 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEID 274
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR ++ G E ++ +L++L ++DGF S ++ VI ATNR DILDPAL+R GR
Sbjct: 275 AIGTKRFDSEVSGD-REVQRTMLELLNQLDGFS-SDERIKVIAATNRADILDPALMRSGR 332
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + P+++ R IL++H+R + DV +E+A T+DF GA+L+ + EA
Sbjct: 333 LDRKIEFPHPTEEARARILQIHSR----KMNVHPDVNFEELARSTDDFNGAQLKAVCVEA 388
Query: 529 GILTARKDLDYIGQEELLEAL 549
G+L R+D + E+ E +
Sbjct: 389 GMLALRRDATEVNHEDFNEGI 409
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 495 (179.3 bits), Expect = 1.0e-46, P = 1.0e-46
Identities = 108/261 (41%), Positives = 159/261 (60%)
Query: 290 SRAKFISAEETTGVTFDDFAGQEYIKRELQE-IVRILKNDEEFQNKGIYCPKGVLLHGPP 348
SR K + +E ++D G E +EL E IV + + E+F+ GI PKGVLL+GPP
Sbjct: 154 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPP 213
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTL+A+A A + F G V+MF+G A V+D F A+ +P IIFIDEID
Sbjct: 214 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEID 273
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR ++ G E ++ +L++L ++DGF S ++ VI ATNR DILDPAL+R GR
Sbjct: 274 AIGTKRFDSEVSGD-REVQRTMLELLNQLDGFS-SDDRIKVIAATNRADILDPALMRSGR 331
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + P+++ R IL++H+R + DV +E+A T+DF GA+L+ + EA
Sbjct: 332 LDRKIEFPHPTEEARGRILQIHSR----KMNVNADVNFEELARSTDDFNGAQLKAVCVEA 387
Query: 529 GILTARKDLDYIGQEELLEAL 549
G+L R+D + E+ E +
Sbjct: 388 GMLALRRDATEVNHEDFNEGI 408
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 492 (178.3 bits), Expect = 2.2e-46, P = 2.2e-46
Identities = 107/261 (40%), Positives = 161/261 (61%)
Query: 290 SRAKFISAEETTGVTFDDFAGQEYIKRELQE-IVRILKNDEEFQNKGIYCPKGVLLHGPP 348
SR K + +E + D G + +EL E IV + + E+F+N GI PKGVL++GPP
Sbjct: 165 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 224
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLA+A A + F G V+MF+G A V+D FA A+ APSIIFIDE+D
Sbjct: 225 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 284
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
A G+KR + G E ++ +L++L ++DGF+ +T QV VI ATNR+DILDPALLR GR
Sbjct: 285 ATGTKRFDSE-KAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPALLRSGR 342
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + +P+++ R I+++H+R + DV +E+A +DF GA+ + + EA
Sbjct: 343 LDQKIEFPMPNEEARARIMQIHSR----KMNVSPDVNYEELARCMDDFNGAQCKAVCVEA 398
Query: 529 GILTARKDLDYIGQEELLEAL 549
G++ R+ + E+ +E +
Sbjct: 399 GMIALRRGTTELTHEDYMEGI 419
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 490 (177.5 bits), Expect = 3.7e-46, P = 3.7e-46
Identities = 106/261 (40%), Positives = 159/261 (60%)
Query: 290 SRAKFISAEETTGVTFDDFAG-QEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPP 348
+R K + +E + D G + I+ ++ IV +K E F+ GI PKG L++GPP
Sbjct: 195 NRVKAMEVDEKPTEKYTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPP 254
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLA+A A E F G V+MF+G A V+D FA A+ APSIIFIDE+D
Sbjct: 255 GTGKTLLARACAAETNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELD 314
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
A+G+KR + G E ++ +L++L ++DGF S ++ V+ ATNR+D+LDPALLR GR
Sbjct: 315 AVGTKRFDSE-KSGDREVQRTMLELLNQLDGF-ASDDRIKVLAATNRVDVLDPALLRSGR 372
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + LP+++ R IL++H+R + E V E+A T++F GA+L+ + EA
Sbjct: 373 LDRKIEFPLPNEEARANILQIHSR----KMTVEDSVNWAELARSTDEFGGAQLKAVCVEA 428
Query: 529 GILTARKDLDYIGQEELLEAL 549
G++ RK IG E ++A+
Sbjct: 429 GMIALRKGHSKIGHENYVDAI 449
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 490 (177.5 bits), Expect = 3.7e-46, P = 3.7e-46
Identities = 102/258 (39%), Positives = 163/258 (63%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+ E+ T+D G + +E++E++ + +K+ E F++ GI PKGVLL+GPPGTGKT
Sbjct: 134 MKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 193
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+A+A F +G++ V+ ++G + V++LF AR APSIIF+DEID+IGS
Sbjct: 194 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSS 253
Query: 414 RGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIV 473
RG GGG +E ++ +L++L ++DGF+ ST + V+ TNR+DILDPALLR GR D+ +
Sbjct: 254 RGESGSGGGDSEVQRTMLELLNQLDGFE-STKNIKVLMCTNRIDILDPALLRPGRIDRKI 312
Query: 474 RVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTA 533
P GR ILK+H+R + + + L++I++ +GAEL+ + EAG+
Sbjct: 313 EFPNPGDAGRLDILKIHSR----KMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYAL 368
Query: 534 RKDLDYIGQEELLEALKR 551
R+ ++ QE+ A+ +
Sbjct: 369 RERRVHVSQEDFEMAVSK 386
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 488 (176.8 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 105/252 (41%), Positives = 161/252 (63%)
Query: 303 VTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAG 361
++F+ G REL+E++ + LKN E F GI PKGVLL+GPPGTGKTLLAKA+A
Sbjct: 169 ISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVAA 228
Query: 362 EAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGG 421
G F + + V+ ++G +A ++++FA A+ P IIF+DE+DAIG +R G
Sbjct: 229 TIGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRRFSE---G 285
Query: 422 GGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPS 479
A+RE + L+++L +MDGF + Q +I ATNR D LDPALLR GR D+ + +GLP+
Sbjct: 286 TSADREIQRTLMELLNQMDGFD-TLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLPN 344
Query: 480 KDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDY 539
+ GR I K+H +K + + E D + ++++ F GA+++N++ EAG R D DY
Sbjct: 345 EAGRLEIFKIHT-SKVAK-QGEFD--FEAAVKMSDGFNGADIRNVVTEAGFFAIRDDRDY 400
Query: 540 IGQEELLEALKR 551
I Q +L++A+++
Sbjct: 401 ILQNDLMKAVRK 412
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 483 (175.1 bits), Expect = 2.2e-45, P = 2.2e-45
Identities = 110/275 (40%), Positives = 168/275 (61%)
Query: 290 SRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPP 348
SR K + +E + D G + +EL E V + + + E F++ GI PKGVL++GPP
Sbjct: 152 SRVKAMEIDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPP 211
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLA+A A + + G V+MF+G A V+D FA A+ P+IIFIDE+D
Sbjct: 212 GTGKTLLARACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELD 271
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR ++ G E ++ +L++L ++DGF S + + VI ATNR+DILDPALLR GR
Sbjct: 272 AIGTKRFDSEVSGD-REVQRTMLELLNQLDGFS-SDANIKVIAATNRIDILDPALLRSGR 329
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + LP+++ R IL++H+R + DV E+A +EDF GA+L+ + EA
Sbjct: 330 LDRKIEFPLPNEEARAHILQIHSR----KMNVSADVNFDELARSSEDFNGAQLKAVCVEA 385
Query: 529 GILTARK---DL---DYIGQEELLEALKRQKGTFE 557
G++ R+ +L D++ E +E + ++K T E
Sbjct: 386 GMIALRRGGTELIHNDFV--EGCVEVMAKKKKTLE 418
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 482 (174.7 bits), Expect = 2.8e-45, P = 2.8e-45
Identities = 106/260 (40%), Positives = 162/260 (62%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
++AE V++ + G REL+E+V + L E F GI PKGVLL+GPPGTGKT
Sbjct: 126 MTAESPGSVSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKT 185
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+AIA F + V+ ++G +A ++++F AR P +IF+DEIDAIG +
Sbjct: 186 LLARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGR 245
Query: 414 RGGPDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDK 471
R G A+RE + L+++L +MDGF + S+V +I ATNR D+LDPALLR GR D+
Sbjct: 246 RFSE---GTSADREIQRTLMELLNQMDGFD-TLSKVKIIMATNRPDVLDPALLRPGRLDR 301
Query: 472 IVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGIL 531
+ + LP++ GR +LK+HA N + DV + IA+L + F A+L+N+ EAG+
Sbjct: 302 KIEIPLPNEAGRVDVLKIHAAN----ITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMF 357
Query: 532 TARKDLDYIGQEELLEALKR 551
R + DY+ +E+ ++A+++
Sbjct: 358 AIRAERDYVMEEDFMKAVRK 377
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 482 (174.7 bits), Expect = 2.8e-45, P = 2.8e-45
Identities = 100/232 (43%), Positives = 151/232 (65%)
Query: 318 LQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVE 377
++ IV + + E+F+N GI PKGVL++GPPGTGKTLLA+A A + F G V+
Sbjct: 216 VEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQ 275
Query: 378 MFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEM 437
MF+G A V+D FA A+ APSIIFIDE+DAIG+KR + G E ++ +L++L ++
Sbjct: 276 MFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSE-KAGDREVQRTMLELLNQL 334
Query: 438 DGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFR 497
DGF+ +T QV VI ATNR+DILDPALLR GR D+ + +P+++ R I+++H+R +
Sbjct: 335 DGFQPNT-QVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSR----K 389
Query: 498 SEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIGQEELLEAL 549
DV +E+A T+DF GA+ + + EAG++ R+ + E+ +E +
Sbjct: 390 MNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGI 441
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 482 (174.7 bits), Expect = 2.8e-45, P = 2.8e-45
Identities = 107/272 (39%), Positives = 166/272 (61%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+S E+ ++F G REL+E++ + LKN E F GI PKGVLL+GPPGTGKT
Sbjct: 121 MSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKT 180
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+A+A GV F + V+ ++G +A ++++F A+ P +IF+DEIDAIG +
Sbjct: 181 LLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGR 240
Query: 414 RGGPDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDK 471
R G A+RE + L+++L +MDGF Q +I ATNR D LDPALLR GR D+
Sbjct: 241 RFSE---GTSADREIQRTLMELLNQMDGFDY-LGQTKIIMATNRPDTLDPALLRPGRLDR 296
Query: 472 IVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGIL 531
+ + LP++ GR ILK+H + ++ ++ + + +LT+ GA+L+N++ EAG +
Sbjct: 297 KIEIPLPNEVGRMEILKIHLE----KVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFI 352
Query: 532 TARKDLDYIGQEELLEA------LKRQKGTFE 557
++D DY+ Q +L+ A LK+ +GT +
Sbjct: 353 AIKEDRDYVIQSDLMSAARKVADLKKLEGTID 384
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 481 (174.4 bits), Expect = 3.6e-45, P = 3.6e-45
Identities = 102/264 (38%), Positives = 165/264 (62%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ T++ G E +E++E++ + +K+ E F++ GI PKG+LL+GPPGTGKTLLA
Sbjct: 137 EKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLA 196
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A F +G++ V+ ++G + V++LF AR APSIIF+DEID+IGS R
Sbjct: 197 RAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSD 256
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
G G +E ++ +L++L ++DGF+ +T + VI ATNR+DILDPALLR GR D+ +
Sbjct: 257 SSGGSGDSEVQRTMLELLNQLDGFE-ATKNIKVIMATNRIDILDPALLRPGRIDRKIEFP 315
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
PS + R IL++H+R+ + + L+ IAE +GAEL+ + EAG+ R+
Sbjct: 316 PPSAEARAEILRIHSRSMNLT----RGIDLKSIAEKMNGASGAELKGVCTEAGMFALRER 371
Query: 537 LDYIGQEELLEALKRQKGTFETGQ 560
++ QE+ A+ + ++G+
Sbjct: 372 RVHVTQEDFELAVAKVLNKGDSGE 395
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 480 (174.0 bits), Expect = 4.7e-45, P = 4.7e-45
Identities = 101/258 (39%), Positives = 164/258 (63%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+ E+ T+D G + +E++E++ + +K+ E F++ GI PKGVLL+GPPGTGKT
Sbjct: 150 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 209
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+A+A F +G++ V+ ++G + V++LF AR APSIIF+DEID+IGS
Sbjct: 210 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 269
Query: 414 RGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIV 473
R G G +E ++ +L++L ++DGF+ S +++ V+ ATNR+DILD ALLR GR D+ +
Sbjct: 270 RMESGSGNGDSEVQRTMLELLNQLDGFEAS-NKIKVLMATNRIDILDQALLRPGRIDRKI 328
Query: 474 RVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTA 533
P+++ RF ILK+H+R + + L++IAE +GAEL+ + EAG+
Sbjct: 329 EFPNPNEESRFDILKIHSRKMNLM----RGIDLKKIAEKMNGASGAELKAVCTEAGMFAL 384
Query: 534 RKDLDYIGQEELLEALKR 551
R+ ++ QE+ A+ +
Sbjct: 385 RERRVHVTQEDFEMAVAK 402
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 477 (173.0 bits), Expect = 1.0e-44, P = 1.0e-44
Identities = 101/261 (38%), Positives = 163/261 (62%)
Query: 290 SRAKFISAEETTGVTFDDFAG-QEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPP 348
+R K + +E F D G + I+ ++ +V + + E+F+N GI+ PKGV+L+GPP
Sbjct: 163 ARVKAMEVDERPTEQFSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVILYGPP 222
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLA+A A + F G V+MF+G A V+D FA A+ AP+IIFIDE+D
Sbjct: 223 GTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 282
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR + G E ++ +L++L +++GF ST+ + VI ATNR+DIL PALLR GR
Sbjct: 283 AIGTKRFDSE-KAGDREVQRTMLELLNQLNGFS-STADIKVIAATNRVDIL-PALLRSGR 339
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + P+++ R I+++H+R + DV +E++ T+DF GA+ + + EA
Sbjct: 340 LDRKIEFPHPNEEARARIMQIHSR----KMNVSNDVNFEELSRSTDDFNGAQCKAVCVEA 395
Query: 529 GILTARKDLDYIGQEELLEAL 549
G++ R+ + + E+ ++A+
Sbjct: 396 GMIALRRSANSVTHEDFMDAI 416
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 477 (173.0 bits), Expect = 1.0e-44, P = 1.0e-44
Identities = 103/256 (40%), Positives = 164/256 (64%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ T++ G + +E++E++ + +K+ E F+ GI PKGVLL+GPPGTGKTLLA
Sbjct: 136 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLA 195
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK-RG 415
+A+A F +G++ V+ F+G A V++LF AR APSIIF+DEID+IGS+ G
Sbjct: 196 RAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRLEG 255
Query: 416 GPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRV 475
G GG +E ++ +L++L ++DGF+ +T + VI ATNR+DILD ALLR GR D+ +
Sbjct: 256 G---SGGDSEVQRTMLELLNQLDGFE-ATKNIKVIMATNRIDILDSALLRPGRIDRKIEF 311
Query: 476 GLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARK 535
P+++ R ILK+H+R + + + L++IAEL +GAE++ + EAG+ R+
Sbjct: 312 PPPNEEARLDILKIHSR----KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRE 367
Query: 536 DLDYIGQEELLEALKR 551
++ QE+ A+ +
Sbjct: 368 RRVHVTQEDFEMAVAK 383
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 475 (172.3 bits), Expect = 1.7e-44, P = 1.7e-44
Identities = 104/257 (40%), Positives = 164/257 (63%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ T++ G + +E++E++ + +K+ E F+ GI PKGVLL+GPPGTGKTLLA
Sbjct: 147 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 206
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKR-- 414
+A+A F +G++ V+ F+G A V++LF AR APSIIF+DEID+IGS R
Sbjct: 207 RAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLE 266
Query: 415 GGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVR 474
GG GG +E ++ +L++L ++DGF+ +T + VI ATNR+DILD ALLR GR D+ +
Sbjct: 267 GG---SGGDSEVQRTMLELLNQLDGFE-ATKNIKVIMATNRIDILDSALLRPGRIDRKIE 322
Query: 475 VGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTAR 534
P+++ R ILK+H+R + + + L++IAEL +GAE++ + EAG+ R
Sbjct: 323 FPPPNEEARLDILKIHSR----KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 378
Query: 535 KDLDYIGQEELLEALKR 551
+ ++ QE+ A+ +
Sbjct: 379 ERRVHVTQEDFEMAVAK 395
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 475 (172.3 bits), Expect = 1.7e-44, P = 1.7e-44
Identities = 104/257 (40%), Positives = 164/257 (63%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ T++ G + +E++E++ + +K+ E F+ GI PKGVLL+GPPGTGKTLLA
Sbjct: 141 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKR-- 414
+A+A F +G++ V+ F+G A V++LF AR APSIIF+DEID+IGS R
Sbjct: 201 RAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLE 260
Query: 415 GGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVR 474
GG GG +E ++ +L++L ++DGF+ +T + VI ATNR+DILD ALLR GR D+ +
Sbjct: 261 GG---SGGDSEVQRTMLELLNQLDGFE-ATKNIKVIMATNRIDILDSALLRPGRIDRKIE 316
Query: 475 VGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTAR 534
P+++ R ILK+H+R + + + L++IAEL +GAE++ + EAG+ R
Sbjct: 317 FPPPNEEARLDILKIHSR----KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 372
Query: 535 KDLDYIGQEELLEALKR 551
+ ++ QE+ A+ +
Sbjct: 373 ERRVHVTQEDFEMAVAK 389
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 475 (172.3 bits), Expect = 1.7e-44, P = 1.7e-44
Identities = 104/257 (40%), Positives = 164/257 (63%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ T++ G + +E++E++ + +K+ E F+ GI PKGVLL+GPPGTGKTLLA
Sbjct: 141 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKR-- 414
+A+A F +G++ V+ F+G A V++LF AR APSIIF+DEID+IGS R
Sbjct: 201 RAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLE 260
Query: 415 GGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVR 474
GG GG +E ++ +L++L ++DGF+ +T + VI ATNR+DILD ALLR GR D+ +
Sbjct: 261 GG---SGGDSEVQRTMLELLNQLDGFE-ATKNIKVIMATNRIDILDSALLRPGRIDRKIE 316
Query: 475 VGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTAR 534
P+++ R ILK+H+R + + + L++IAEL +GAE++ + EAG+ R
Sbjct: 317 FPPPNEEARLDILKIHSR----KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 372
Query: 535 KDLDYIGQEELLEALKR 551
+ ++ QE+ A+ +
Sbjct: 373 ERRVHVTQEDFEMAVAK 389
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 475 (172.3 bits), Expect = 1.7e-44, P = 1.7e-44
Identities = 104/257 (40%), Positives = 164/257 (63%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ T++ G + +E++E++ + +K+ E F+ GI PKGVLL+GPPGTGKTLLA
Sbjct: 141 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKR-- 414
+A+A F +G++ V+ F+G A V++LF AR APSIIF+DEID+IGS R
Sbjct: 201 RAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLE 260
Query: 415 GGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVR 474
GG GG +E ++ +L++L ++DGF+ +T + VI ATNR+DILD ALLR GR D+ +
Sbjct: 261 GG---SGGDSEVQRTMLELLNQLDGFE-ATKNIKVIMATNRIDILDSALLRPGRIDRKIE 316
Query: 475 VGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTAR 534
P+++ R ILK+H+R + + + L++IAEL +GAE++ + EAG+ R
Sbjct: 317 FPPPNEEARLDILKIHSR----KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 372
Query: 535 KDLDYIGQEELLEALKR 551
+ ++ QE+ A+ +
Sbjct: 373 ERRVHVTQEDFEMAVAK 389
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 475 (172.3 bits), Expect = 1.7e-44, P = 1.7e-44
Identities = 104/257 (40%), Positives = 164/257 (63%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ T++ G + +E++E++ + +K+ E F+ GI PKGVLL+GPPGTGKTLLA
Sbjct: 141 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKR-- 414
+A+A F +G++ V+ F+G A V++LF AR APSIIF+DEID+IGS R
Sbjct: 201 RAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLE 260
Query: 415 GGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVR 474
GG GG +E ++ +L++L ++DGF+ +T + VI ATNR+DILD ALLR GR D+ +
Sbjct: 261 GG---SGGDSEVQRTMLELLNQLDGFE-ATKNIKVIMATNRIDILDSALLRPGRIDRKIE 316
Query: 475 VGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTAR 534
P+++ R ILK+H+R + + + L++IAEL +GAE++ + EAG+ R
Sbjct: 317 FPPPNEEARLDILKIHSR----KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 372
Query: 535 KDLDYIGQEELLEALKR 551
+ ++ QE+ A+ +
Sbjct: 373 ERRVHVTQEDFEMAVAK 389
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 475 (172.3 bits), Expect = 1.7e-44, P = 1.7e-44
Identities = 104/257 (40%), Positives = 164/257 (63%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ T++ G + +E++E++ + +K+ E F+ GI PKGVLL+GPPGTGKTLLA
Sbjct: 149 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 208
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKR-- 414
+A+A F +G++ V+ F+G A V++LF AR APSIIF+DEID+IGS R
Sbjct: 209 RAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLE 268
Query: 415 GGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVR 474
GG GG +E ++ +L++L ++DGF+ +T + VI ATNR+DILD ALLR GR D+ +
Sbjct: 269 GG---SGGDSEVQRTMLELLNQLDGFE-ATKNIKVIMATNRIDILDSALLRPGRIDRKIE 324
Query: 475 VGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTAR 534
P+++ R ILK+H+R + + + L++IAEL +GAE++ + EAG+ R
Sbjct: 325 FPPPNEEARLDILKIHSR----KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 380
Query: 535 KDLDYIGQEELLEALKR 551
+ ++ QE+ A+ +
Sbjct: 381 ERRVHVTQEDFEMAVAK 397
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 475 (172.3 bits), Expect = 1.7e-44, P = 1.7e-44
Identities = 104/257 (40%), Positives = 164/257 (63%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ T++ G + +E++E++ + +K+ E F+ GI PKGVLL+GPPGTGKTLLA
Sbjct: 149 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 208
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKR-- 414
+A+A F +G++ V+ F+G A V++LF AR APSIIF+DEID+IGS R
Sbjct: 209 RAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLE 268
Query: 415 GGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVR 474
GG GG +E ++ +L++L ++DGF+ +T + VI ATNR+DILD ALLR GR D+ +
Sbjct: 269 GG---SGGDSEVQRTMLELLNQLDGFE-ATKNIKVIMATNRIDILDSALLRPGRIDRKIE 324
Query: 475 VGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTAR 534
P+++ R ILK+H+R + + + L++IAEL +GAE++ + EAG+ R
Sbjct: 325 FPPPNEEARLDILKIHSR----KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 380
Query: 535 KDLDYIGQEELLEALKR 551
+ ++ QE+ A+ +
Sbjct: 381 ERRVHVTQEDFEMAVAK 397
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 475 (172.3 bits), Expect = 1.7e-44, P = 1.7e-44
Identities = 104/257 (40%), Positives = 164/257 (63%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ T++ G + +E++E++ + +K+ E F+ GI PKGVLL+GPPGTGKTLLA
Sbjct: 141 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKR-- 414
+A+A F +G++ V+ F+G A V++LF AR APSIIF+DEID+IGS R
Sbjct: 201 RAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLE 260
Query: 415 GGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVR 474
GG GG +E ++ +L++L ++DGF+ +T + VI ATNR+DILD ALLR GR D+ +
Sbjct: 261 GG---SGGDSEVQRTMLELLNQLDGFE-ATKNIKVIMATNRIDILDSALLRPGRIDRKIE 316
Query: 475 VGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTAR 534
P+++ R ILK+H+R + + + L++IAEL +GAE++ + EAG+ R
Sbjct: 317 FPPPNEEARLDILKIHSR----KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 372
Query: 535 KDLDYIGQEELLEALKR 551
+ ++ QE+ A+ +
Sbjct: 373 ERRVHVTQEDFEMAVAK 389
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 475 (172.3 bits), Expect = 1.7e-44, P = 1.7e-44
Identities = 104/257 (40%), Positives = 164/257 (63%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ T++ G + +E++E++ + +K+ E F+ GI PKGVLL+GPPGTGKTLLA
Sbjct: 141 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKR-- 414
+A+A F +G++ V+ F+G A V++LF AR APSIIF+DEID+IGS R
Sbjct: 201 RAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLE 260
Query: 415 GGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVR 474
GG GG +E ++ +L++L ++DGF+ +T + VI ATNR+DILD ALLR GR D+ +
Sbjct: 261 GG---SGGDSEVQRTMLELLNQLDGFE-ATKNIKVIMATNRIDILDSALLRPGRIDRKIE 316
Query: 475 VGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTAR 534
P+++ R ILK+H+R + + + L++IAEL +GAE++ + EAG+ R
Sbjct: 317 FPPPNEEARLDILKIHSR----KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 372
Query: 535 KDLDYIGQEELLEALKR 551
+ ++ QE+ A+ +
Sbjct: 373 ERRVHVTQEDFEMAVAK 389
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 475 (172.3 bits), Expect = 1.7e-44, P = 1.7e-44
Identities = 104/257 (40%), Positives = 164/257 (63%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ T++ G + +E++E++ + +K+ E F+ GI PKGVLL+GPPGTGKTLLA
Sbjct: 141 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKR-- 414
+A+A F +G++ V+ F+G A V++LF AR APSIIF+DEID+IGS R
Sbjct: 201 RAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLE 260
Query: 415 GGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVR 474
GG GG +E ++ +L++L ++DGF+ +T + VI ATNR+DILD ALLR GR D+ +
Sbjct: 261 GG---SGGDSEVQRTMLELLNQLDGFE-ATKNIKVIMATNRIDILDSALLRPGRIDRKIE 316
Query: 475 VGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTAR 534
P+++ R ILK+H+R + + + L++IAEL +GAE++ + EAG+ R
Sbjct: 317 FPPPNEEARLDILKIHSR----KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 372
Query: 535 KDLDYIGQEELLEALKR 551
+ ++ QE+ A+ +
Sbjct: 373 ERRVHVTQEDFEMAVAK 389
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 474 (171.9 bits), Expect = 2.1e-44, P = 2.1e-44
Identities = 105/260 (40%), Positives = 160/260 (61%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+S E+ V++ + G REL+E++ + L N E FQ GI PKG LL+GPPGTGKT
Sbjct: 122 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 181
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+A+A + F + V+ ++G +A ++++F AR P IIF+DEIDAIG +
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 414 RGGPDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDK 471
R G A+RE + L+++L +MDGF + +V +I ATNR D LDPALLR GR D+
Sbjct: 242 RFSE---GTSADREIQRTLMELLNQMDGFD-TLHRVKMIMATNRPDTLDPALLRPGRLDR 297
Query: 472 IVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGIL 531
+ + LP++ R ILK+HA E D + I +L++ F GA+L+N+ EAG+
Sbjct: 298 KIHIDLPNEQARLDILKIHAGP--ITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMF 353
Query: 532 TARKDLDYIGQEELLEALKR 551
R D D++ QE+ ++A+++
Sbjct: 354 AIRADHDFVVQEDFMKAVRK 373
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 474 (171.9 bits), Expect = 2.1e-44, P = 2.1e-44
Identities = 105/260 (40%), Positives = 160/260 (61%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+S E+ V++ + G REL+E++ + L N E FQ GI PKG LL+GPPGTGKT
Sbjct: 128 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 187
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+A+A + F + V+ ++G +A ++++F AR P IIF+DEIDAIG +
Sbjct: 188 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 247
Query: 414 RGGPDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDK 471
R G A+RE + L+++L +MDGF + +V +I ATNR D LDPALLR GR D+
Sbjct: 248 RFSE---GTSADREIQRTLMELLNQMDGFD-TLHRVKMIMATNRPDTLDPALLRPGRLDR 303
Query: 472 IVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGIL 531
+ + LP++ R ILK+HA E D + I +L++ F GA+L+N+ EAG+
Sbjct: 304 KIHIDLPNEQARLDILKIHAGP--ITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMF 359
Query: 532 TARKDLDYIGQEELLEALKR 551
R D D++ QE+ ++A+++
Sbjct: 360 AIRADHDFVVQEDFMKAVRK 379
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 474 (171.9 bits), Expect = 2.1e-44, P = 2.1e-44
Identities = 105/260 (40%), Positives = 160/260 (61%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+S E+ V++ + G REL+E++ + L N E FQ GI PKG LL+GPPGTGKT
Sbjct: 122 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 181
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+A+A + F + V+ ++G +A ++++F AR P IIF+DEIDAIG +
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 414 RGGPDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDK 471
R G A+RE + L+++L +MDGF + +V +I ATNR D LDPALLR GR D+
Sbjct: 242 RFSE---GTSADREIQRTLMELLNQMDGFD-TLHRVKMIMATNRPDTLDPALLRPGRLDR 297
Query: 472 IVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGIL 531
+ + LP++ R ILK+HA E D + I +L++ F GA+L+N+ EAG+
Sbjct: 298 KIHIDLPNEQARLDILKIHAGP--ITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMF 353
Query: 532 TARKDLDYIGQEELLEALKR 551
R D D++ QE+ ++A+++
Sbjct: 354 AIRADHDFVVQEDFMKAVRK 373
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 474 (171.9 bits), Expect = 2.1e-44, P = 2.1e-44
Identities = 105/260 (40%), Positives = 160/260 (61%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+S E+ V++ + G REL+E++ + L N E FQ GI PKG LL+GPPGTGKT
Sbjct: 136 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 195
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+A+A + F + V+ ++G +A ++++F AR P IIF+DEIDAIG +
Sbjct: 196 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 255
Query: 414 RGGPDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDK 471
R G A+RE + L+++L +MDGF + +V +I ATNR D LDPALLR GR D+
Sbjct: 256 RFSE---GTSADREIQRTLMELLNQMDGFD-TLHRVKMIMATNRPDTLDPALLRPGRLDR 311
Query: 472 IVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGIL 531
+ + LP++ R ILK+HA E D + I +L++ F GA+L+N+ EAG+
Sbjct: 312 KIHIDLPNEQARLDILKIHAGP--ITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMF 367
Query: 532 TARKDLDYIGQEELLEALKR 551
R D D++ QE+ ++A+++
Sbjct: 368 AIRADHDFVVQEDFMKAVRK 387
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 474 (171.9 bits), Expect = 2.1e-44, P = 2.1e-44
Identities = 105/260 (40%), Positives = 160/260 (61%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+S E+ V++ + G REL+E++ + L N E FQ GI PKG LL+GPPGTGKT
Sbjct: 122 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 181
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+A+A + F + V+ ++G +A ++++F AR P IIF+DEIDAIG +
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 414 RGGPDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDK 471
R G A+RE + L+++L +MDGF + +V +I ATNR D LDPALLR GR D+
Sbjct: 242 RFSE---GTSADREIQRTLMELLNQMDGFD-TLHRVKMIMATNRPDTLDPALLRPGRLDR 297
Query: 472 IVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGIL 531
+ + LP++ R ILK+HA E D + I +L++ F GA+L+N+ EAG+
Sbjct: 298 KIHIDLPNEQARLDILKIHAGP--ITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMF 353
Query: 532 TARKDLDYIGQEELLEALKR 551
R D D++ QE+ ++A+++
Sbjct: 354 AIRADHDFVVQEDFMKAVRK 373
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 474 (171.9 bits), Expect = 2.1e-44, P = 2.1e-44
Identities = 105/260 (40%), Positives = 160/260 (61%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+S E+ V++ + G REL+E++ + L N E FQ GI PKG LL+GPPGTGKT
Sbjct: 122 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 181
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+A+A + F + V+ ++G +A ++++F AR P IIF+DEIDAIG +
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 414 RGGPDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDK 471
R G A+RE + L+++L +MDGF + +V +I ATNR D LDPALLR GR D+
Sbjct: 242 RFSE---GTSADREIQRTLMELLNQMDGFD-TLHRVKMIMATNRPDTLDPALLRPGRLDR 297
Query: 472 IVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGIL 531
+ + LP++ R ILK+HA E D + I +L++ F GA+L+N+ EAG+
Sbjct: 298 KIHIDLPNEQARLDILKIHAGP--ITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMF 353
Query: 532 TARKDLDYIGQEELLEALKR 551
R D D++ QE+ ++A+++
Sbjct: 354 AIRADHDFVVQEDFMKAVRK 373
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 474 (171.9 bits), Expect = 2.1e-44, P = 2.1e-44
Identities = 105/260 (40%), Positives = 160/260 (61%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+S E+ V++ + G REL+E++ + L N E FQ GI PKG LL+GPPGTGKT
Sbjct: 114 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 173
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+A+A + F + V+ ++G +A ++++F AR P IIF+DEIDAIG +
Sbjct: 174 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 233
Query: 414 RGGPDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDK 471
R G A+RE + L+++L +MDGF + +V +I ATNR D LDPALLR GR D+
Sbjct: 234 RFSE---GTSADREIQRTLMELLNQMDGFD-TLHRVKMIMATNRPDTLDPALLRPGRLDR 289
Query: 472 IVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGIL 531
+ + LP++ R ILK+HA E D + I +L++ F GA+L+N+ EAG+
Sbjct: 290 KIHIDLPNEQARLDILKIHAGP--ITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMF 345
Query: 532 TARKDLDYIGQEELLEALKR 551
R D D++ QE+ ++A+++
Sbjct: 346 AIRADHDFVVQEDFMKAVRK 365
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 474 (171.9 bits), Expect = 2.1e-44, P = 2.1e-44
Identities = 105/260 (40%), Positives = 160/260 (61%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+S E+ V++ + G REL+E++ + L N E FQ GI PKG LL+GPPGTGKT
Sbjct: 136 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 195
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+A+A + F + V+ ++G +A ++++F AR P IIF+DEIDAIG +
Sbjct: 196 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 255
Query: 414 RGGPDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDK 471
R G A+RE + L+++L +MDGF + +V +I ATNR D LDPALLR GR D+
Sbjct: 256 RFSE---GTSADREIQRTLMELLNQMDGFD-TLHRVKMIMATNRPDTLDPALLRPGRLDR 311
Query: 472 IVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGIL 531
+ + LP++ R ILK+HA E D + I +L++ F GA+L+N+ EAG+
Sbjct: 312 KIHIDLPNEQARLDILKIHAGP--ITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMF 367
Query: 532 TARKDLDYIGQEELLEALKR 551
R D D++ QE+ ++A+++
Sbjct: 368 AIRADHDFVVQEDFMKAVRK 387
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 474 (171.9 bits), Expect = 2.1e-44, P = 2.1e-44
Identities = 103/260 (39%), Positives = 161/260 (61%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+S E+ V++ + G REL+E++ + L N E FQ GI PKG LL+GPPGTGKT
Sbjct: 122 MSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 181
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+A+A + F + V+ ++G +A ++++F AR P IIF+DEIDAIG +
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 414 RGGPDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDK 471
R G A+RE + L+++L +MDGF + +V +I ATNR D LDPALLR GR D+
Sbjct: 242 RFSE---GTSADREIQRTLMELLNQMDGFD-TLHRVKMIMATNRPDTLDPALLRPGRLDR 297
Query: 472 IVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGIL 531
+ + LP++ R ILK+H+ + D+ + I +L++ F GA+L+N+ EAG+
Sbjct: 298 KIHIELPNEQARLDILKIHSGP----ITKHGDIDYEAIVKLSDGFNGADLRNVCTEAGMF 353
Query: 532 TARKDLDYIGQEELLEALKR 551
R D +Y+ QE+ ++A+++
Sbjct: 354 AIRADHEYVTQEDFMKAVRK 373
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 473 (171.6 bits), Expect = 2.7e-44, P = 2.7e-44
Identities = 102/248 (41%), Positives = 157/248 (63%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ T+D G + +E++E++ + LK+ E F++ GI PKGVLL+GPPGTGKTLLA
Sbjct: 124 EKVPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 183
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A F +G++ V+ ++G + V++LF AR APSIIF+DEID+IGS R
Sbjct: 184 RAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRID 243
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
G G +E ++ +L++L ++DGF+ T + +I ATNRLDILDPALLR GR D+ +
Sbjct: 244 -SAGSGDSEVQRTMLELLNQLDGFE-PTKNIKIIMATNRLDILDPALLRPGRIDRKIEFP 301
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
PS + R IL++H+R+ + + L +IAE +GAEL+ + EAG+ R+
Sbjct: 302 PPSVEARADILRIHSRSMNLT----RGINLTKIAEKMNGCSGAELKGVCTEAGMYALRER 357
Query: 537 LDYIGQEE 544
++ QE+
Sbjct: 358 RVHVTQED 365
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 473 (171.6 bits), Expect = 2.7e-44, P = 2.7e-44
Identities = 105/260 (40%), Positives = 160/260 (61%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+S E+ V++ + G REL+E++ + L N E FQ GI PKG LL+GPPGTGKT
Sbjct: 136 MSHEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 195
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+A+A + F + V+ ++G +A ++++F AR P IIF+DEIDAIG +
Sbjct: 196 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 255
Query: 414 RGGPDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDK 471
R G A+RE + L+++L +MDGF + +V +I ATNR D LDPALLR GR D+
Sbjct: 256 RFSE---GTSADREIQRTLMELLNQMDGFD-TLHRVKMIMATNRPDTLDPALLRPGRLDR 311
Query: 472 IVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGIL 531
+ + LP++ R ILK+HA E D + I +L++ F GA+L+N+ EAG+
Sbjct: 312 KIHIDLPNEQARLDILKIHAGP--ITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMF 367
Query: 532 TARKDLDYIGQEELLEALKR 551
R D D++ QE+ ++A+++
Sbjct: 368 AIRADHDFVVQEDFMKAVRK 387
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 473 (171.6 bits), Expect = 2.7e-44, P = 2.7e-44
Identities = 105/260 (40%), Positives = 160/260 (61%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+S E+ V++ + G REL+E++ + L N E FQ GI PKG LL+GPPGTGKT
Sbjct: 122 MSHEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 181
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+A+A + F + V+ ++G +A ++++F AR P IIF+DEIDAIG +
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 414 RGGPDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDK 471
R G A+RE + L+++L +MDGF + +V +I ATNR D LDPALLR GR D+
Sbjct: 242 RFSE---GTSADREIQRTLMELLNQMDGFD-TLHRVKMIMATNRPDTLDPALLRPGRLDR 297
Query: 472 IVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGIL 531
+ + LP++ R ILK+HA E D + I +L++ F GA+L+N+ EAG+
Sbjct: 298 KIHIDLPNEQARLDILKIHAGP--ITKHGEIDY--EAIVKLSDGFNGADLRNVCTEAGMF 353
Query: 532 TARKDLDYIGQEELLEALKR 551
R D D++ QE+ ++A+++
Sbjct: 354 AIRADHDFVVQEDFMKAVRK 373
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 472 (171.2 bits), Expect = 3.5e-44, P = 3.5e-44
Identities = 103/256 (40%), Positives = 164/256 (64%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ T++ G + +E++E++ + +K+ E F GI PKGVLL+GPPGTGKTLLA
Sbjct: 140 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 199
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A F +G++ V+ F+G + V++LF AR APSIIF+DEID+IGS R
Sbjct: 200 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR-- 257
Query: 417 PDIGGGG-AEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRV 475
+ G GG +E ++ +L++L ++DGF+ +T + VI ATNR+DILDPALLR GR D+ +
Sbjct: 258 IESGSGGDSEVQRTMLELLNQLDGFE-ATKNIKVIMATNRIDILDPALLRPGRIDRKIEF 316
Query: 476 GLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARK 535
P+++ R ILK+H+R + + + L++IAEL +GAE++ + EAG+ R+
Sbjct: 317 PPPNEEARLDILKIHSR----KMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRE 372
Query: 536 DLDYIGQEELLEALKR 551
++ QE+ A+ +
Sbjct: 373 RRVHVTQEDFEMAVAK 388
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 490 (177.5 bits), Expect = 4.0e-44, Sum P(2) = 4.0e-44
Identities = 110/271 (40%), Positives = 163/271 (60%)
Query: 299 ETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAK 357
E VT++D G E +KRELQE+V+ +++ ++F G+ KGVL +GPPG GKTLLAK
Sbjct: 470 EVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 529
Query: 358 AIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGP 417
AIA E F + G + + M+ G + + V+++F AR AP ++F DE+D+I RGG
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG- 588
Query: 418 DIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGL 477
+IG GG ++ + QILTEMDG + V +IGATNR DI+DPA+LR GR D+++ + L
Sbjct: 589 NIGDGGGAADRVINQILTEMDGMSTKKN-VFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 478 PSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDL 537
P + R AILK + R +S KDV L+ +A++T F+GA+L I A L R+ +
Sbjct: 648 PDEKSRVAILKANLR----KSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESI 703
Query: 538 DYIGQEELLEALKRQKGTFETGQEDSTDIPE 568
+ E+ +RQ E+ +PE
Sbjct: 704 E----SEIRRERERQTNPSAMEVEEDDPVPE 730
Score = 427 (155.4 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 99/253 (39%), Positives = 148/253 (58%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E V +DD G +++E+V + L++ F+ G+ P+G+LL+GPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A E G FF NG + + G + S ++ F A AP+IIFIDE+DAI KR
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 313
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
+ G ER + Q+LT MDG K + V+V+ ATNR + +DPAL R GRFD+ V +G
Sbjct: 314 -EKTHGEVERRI-VSQLLTLMDGLK-QRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 370
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
+P GR IL++H +N DV L+++A T GA+L + +EA + RK
Sbjct: 371 IPDATGRLEILQIHTKNMKLAD----DVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 537 LDYIG-QEELLEA 548
+D I ++E ++A
Sbjct: 427 MDLIDLEDETIDA 439
Score = 44 (20.5 bits), Expect = 4.0e-44, Sum P(2) = 4.0e-44
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 825 ASMEVEEDNQKPQLLMASHF 844
++MEVEED+ P++ HF
Sbjct: 718 SAMEVEEDDPVPEI-RRDHF 736
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 490 (177.5 bits), Expect = 4.0e-44, Sum P(2) = 4.0e-44
Identities = 110/271 (40%), Positives = 163/271 (60%)
Query: 299 ETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAK 357
E VT++D G E +KRELQE+V+ +++ ++F G+ KGVL +GPPG GKTLLAK
Sbjct: 470 EVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 529
Query: 358 AIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGP 417
AIA E F + G + + M+ G + + V+++F AR AP ++F DE+D+I RGG
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG- 588
Query: 418 DIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGL 477
+IG GG ++ + QILTEMDG + V +IGATNR DI+DPA+LR GR D+++ + L
Sbjct: 589 NIGDGGGAADRVINQILTEMDGMSTKKN-VFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 478 PSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDL 537
P + R AILK + R +S KDV L+ +A++T F+GA+L I A L R+ +
Sbjct: 648 PDEKSRVAILKANLR----KSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESI 703
Query: 538 DYIGQEELLEALKRQKGTFETGQEDSTDIPE 568
+ E+ +RQ E+ +PE
Sbjct: 704 E----SEIRRERERQTNPSAMEVEEDDPVPE 730
Score = 427 (155.4 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 99/253 (39%), Positives = 148/253 (58%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E V +DD G +++E+V + L++ F+ G+ P+G+LL+GPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A E G FF NG + + G + S ++ F A AP+IIFIDE+DAI KR
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 313
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
+ G ER + Q+LT MDG K + V+V+ ATNR + +DPAL R GRFD+ V +G
Sbjct: 314 -EKTHGEVERRI-VSQLLTLMDGLK-QRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 370
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
+P GR IL++H +N DV L+++A T GA+L + +EA + RK
Sbjct: 371 IPDATGRLEILQIHTKNMKLAD----DVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 537 LDYIG-QEELLEA 548
+D I ++E ++A
Sbjct: 427 MDLIDLEDETIDA 439
Score = 44 (20.5 bits), Expect = 4.0e-44, Sum P(2) = 4.0e-44
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 825 ASMEVEEDNQKPQLLMASHF 844
++MEVEED+ P++ HF
Sbjct: 718 SAMEVEEDDPVPEI-RRDHF 736
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 490 (177.5 bits), Expect = 4.0e-44, Sum P(2) = 4.0e-44
Identities = 110/271 (40%), Positives = 163/271 (60%)
Query: 299 ETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAK 357
E VT++D G E +KRELQE+V+ +++ ++F G+ KGVL +GPPG GKTLLAK
Sbjct: 470 EVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 529
Query: 358 AIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGP 417
AIA E F + G + + M+ G + + V+++F AR AP ++F DE+D+I RGG
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG- 588
Query: 418 DIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGL 477
+IG GG ++ + QILTEMDG + V +IGATNR DI+DPA+LR GR D+++ + L
Sbjct: 589 NIGDGGGAADRVINQILTEMDGMSTKKN-VFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 478 PSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDL 537
P + R AILK + R +S KDV L+ +A++T F+GA+L I A L R+ +
Sbjct: 648 PDEKSRVAILKANLR----KSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESI 703
Query: 538 DYIGQEELLEALKRQKGTFETGQEDSTDIPE 568
+ E+ +RQ E+ +PE
Sbjct: 704 E----SEIRRERERQTNPSAMEVEEDDPVPE 730
Score = 427 (155.4 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 99/253 (39%), Positives = 148/253 (58%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E V +DD G +++E+V + L++ F+ G+ P+G+LL+GPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A E G FF NG + + G + S ++ F A AP+IIFIDE+DAI KR
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 313
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
+ G ER + Q+LT MDG K + V+V+ ATNR + +DPAL R GRFD+ V +G
Sbjct: 314 -EKTHGEVERRI-VSQLLTLMDGLK-QRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 370
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
+P GR IL++H +N DV L+++A T GA+L + +EA + RK
Sbjct: 371 IPDATGRLEILQIHTKNMKLAD----DVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 537 LDYIG-QEELLEA 548
+D I ++E ++A
Sbjct: 427 MDLIDLEDETIDA 439
Score = 44 (20.5 bits), Expect = 4.0e-44, Sum P(2) = 4.0e-44
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 825 ASMEVEEDNQKPQLLMASHF 844
++MEVEED+ P++ HF
Sbjct: 718 SAMEVEEDDPVPEI-RRDHF 736
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 490 (177.5 bits), Expect = 4.0e-44, Sum P(2) = 4.0e-44
Identities = 110/271 (40%), Positives = 163/271 (60%)
Query: 299 ETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAK 357
E VT++D G E +KRELQE+V+ +++ ++F G+ KGVL +GPPG GKTLLAK
Sbjct: 470 EVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 529
Query: 358 AIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGP 417
AIA E F + G + + M+ G + + V+++F AR AP ++F DE+D+I RGG
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG- 588
Query: 418 DIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGL 477
+IG GG ++ + QILTEMDG + V +IGATNR DI+DPA+LR GR D+++ + L
Sbjct: 589 NIGDGGGAADRVINQILTEMDGMSTKKN-VFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 478 PSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDL 537
P + R AILK + R +S KDV L+ +A++T F+GA+L I A L R+ +
Sbjct: 648 PDEKSRVAILKANLR----KSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESI 703
Query: 538 DYIGQEELLEALKRQKGTFETGQEDSTDIPE 568
+ E+ +RQ E+ +PE
Sbjct: 704 E----SEIRRERERQTNPSAMEVEEDDPVPE 730
Score = 427 (155.4 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 99/253 (39%), Positives = 148/253 (58%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E V +DD G +++E+V + L++ F+ G+ P+G+LL+GPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A E G FF NG + + G + S ++ F A AP+IIFIDE+DAI KR
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 313
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
+ G ER + Q+LT MDG K + V+V+ ATNR + +DPAL R GRFD+ V +G
Sbjct: 314 -EKTHGEVERRI-VSQLLTLMDGLK-QRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 370
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
+P GR IL++H +N DV L+++A T GA+L + +EA + RK
Sbjct: 371 IPDATGRLEILQIHTKNMKLAD----DVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 537 LDYIG-QEELLEA 548
+D I ++E ++A
Sbjct: 427 MDLIDLEDETIDA 439
Score = 44 (20.5 bits), Expect = 4.0e-44, Sum P(2) = 4.0e-44
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 825 ASMEVEEDNQKPQLLMASHF 844
++MEVEED+ P++ HF
Sbjct: 718 SAMEVEEDDPVPEI-RRDHF 736
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 490 (177.5 bits), Expect = 4.0e-44, Sum P(2) = 4.0e-44
Identities = 110/271 (40%), Positives = 163/271 (60%)
Query: 299 ETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAK 357
E VT++D G E +KRELQE+V+ +++ ++F G+ KGVL +GPPG GKTLLAK
Sbjct: 470 EVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 529
Query: 358 AIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGP 417
AIA E F + G + + M+ G + + V+++F AR AP ++F DE+D+I RGG
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG- 588
Query: 418 DIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGL 477
+IG GG ++ + QILTEMDG + V +IGATNR DI+DPA+LR GR D+++ + L
Sbjct: 589 NIGDGGGAADRVINQILTEMDGMSTKKN-VFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 478 PSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDL 537
P + R AILK + R +S KDV L+ +A++T F+GA+L I A L R+ +
Sbjct: 648 PDEKSRVAILKANLR----KSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESI 703
Query: 538 DYIGQEELLEALKRQKGTFETGQEDSTDIPE 568
+ E+ +RQ E+ +PE
Sbjct: 704 E----SEIRRERERQTNPSAMEVEEDDPVPE 730
Score = 427 (155.4 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 99/253 (39%), Positives = 148/253 (58%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E V +DD G +++E+V + L++ F+ G+ P+G+LL+GPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A E G FF NG + + G + S ++ F A AP+IIFIDE+DAI KR
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 313
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
+ G ER + Q+LT MDG K + V+V+ ATNR + +DPAL R GRFD+ V +G
Sbjct: 314 -EKTHGEVERRI-VSQLLTLMDGLK-QRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 370
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
+P GR IL++H +N DV L+++A T GA+L + +EA + RK
Sbjct: 371 IPDATGRLEILQIHTKNMKLAD----DVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 537 LDYIG-QEELLEA 548
+D I ++E ++A
Sbjct: 427 MDLIDLEDETIDA 439
Score = 44 (20.5 bits), Expect = 4.0e-44, Sum P(2) = 4.0e-44
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 825 ASMEVEEDNQKPQLLMASHF 844
++MEVEED+ P++ HF
Sbjct: 718 SAMEVEEDDPVPEI-RRDHF 736
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 471 (170.9 bits), Expect = 4.5e-44, P = 4.5e-44
Identities = 105/260 (40%), Positives = 159/260 (61%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+S E+ V++ + G REL+E++ + L N E FQ GI PKG LL+GPPGTGKT
Sbjct: 122 MSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKT 181
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+A+A + F + V+ ++G +A ++++F AR P IIF+DEIDAIG +
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 414 RGGPDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDK 471
R G A+RE + L+++L +MDGF + +V +I ATNR D LDPALLR GR D+
Sbjct: 242 RFSE---GTSADREIQRTLMELLNQMDGFD-TLHRVKMIMATNRPDTLDPALLRPGRLDR 297
Query: 472 IVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGIL 531
+ + LP++ R ILK+HA E D + I +L++ F GA+L N+ EAG+
Sbjct: 298 KIHIDLPNEQARLDILKIHAGP--ITKHGEIDY--EAIVKLSDGFNGADLGNVCTEAGMF 353
Query: 532 TARKDLDYIGQEELLEALKR 551
R D D++ QE+ ++A+++
Sbjct: 354 AIRADHDFVVQEDFMKAVRK 373
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 490 (177.5 bits), Expect = 5.0e-44, Sum P(2) = 5.0e-44
Identities = 110/271 (40%), Positives = 163/271 (60%)
Query: 299 ETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAK 357
E VT++D G E +KRELQE+V+ +++ ++F G+ KGVL +GPPG GKTLLAK
Sbjct: 486 EVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 545
Query: 358 AIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGP 417
AIA E F + G + + M+ G + + V+++F AR AP ++F DE+D+I RGG
Sbjct: 546 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG- 604
Query: 418 DIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGL 477
+IG GG ++ + QILTEMDG + V +IGATNR DI+DPA+LR GR D+++ + L
Sbjct: 605 NIGDGGGAADRVINQILTEMDGMSTKKN-VFIIGATNRPDIIDPAILRPGRLDQLIYIPL 663
Query: 478 PSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDL 537
P + R AILK + R +S KDV L+ +A++T F+GA+L I A L R+ +
Sbjct: 664 PDEKSRVAILKANLR----KSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESI 719
Query: 538 DYIGQEELLEALKRQKGTFETGQEDSTDIPE 568
+ E+ +RQ E+ +PE
Sbjct: 720 E----SEIRRERERQTNPSAMEVEEDDPVPE 746
Score = 427 (155.4 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 99/253 (39%), Positives = 148/253 (58%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E V +DD G +++E+V + L++ F+ G+ P+G+LL+GPPGTGKTL+A
Sbjct: 212 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 271
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A E G FF NG + + G + S ++ F A AP+IIFIDE+DAI KR
Sbjct: 272 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 329
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
+ G ER + Q+LT MDG K + V+V+ ATNR + +DPAL R GRFD+ V +G
Sbjct: 330 -EKTHGEVERRI-VSQLLTLMDGLK-QRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 386
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
+P GR IL++H +N DV L+++A T GA+L + +EA + RK
Sbjct: 387 IPDATGRLEILQIHTKNMKLAD----DVDLEQVANETHGHVGADLAALCSEAALQAIRKK 442
Query: 537 LDYIG-QEELLEA 548
+D I ++E ++A
Sbjct: 443 MDLIDLEDETIDA 455
Score = 44 (20.5 bits), Expect = 5.0e-44, Sum P(2) = 5.0e-44
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 825 ASMEVEEDNQKPQLLMASHF 844
++MEVEED+ P++ HF
Sbjct: 734 SAMEVEEDDPVPEI-RRDHF 752
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 489 (177.2 bits), Expect = 5.3e-44, Sum P(2) = 5.3e-44
Identities = 110/271 (40%), Positives = 162/271 (59%)
Query: 299 ETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAK 357
E VT++D G E +KRELQE+V+ +++ ++F G+ KGVL +GPPG GKTLLAK
Sbjct: 470 EVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 529
Query: 358 AIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGP 417
AIA E F + G + + M+ G + + V+++F AR AP ++F DE+D+I RGG
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG- 588
Query: 418 DIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGL 477
+IG GG ++ + QILTEMDG + V +IGATNR DI+DPA+LR GR D+++ + L
Sbjct: 589 NIGDGGGAADRVINQILTEMDGMSTKKN-VFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 478 PSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDL 537
P + R AILK + R +S KDV L +A++T F+GA+L I A L R+ +
Sbjct: 648 PDEKSRIAILKANLR----KSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESI 703
Query: 538 DYIGQEELLEALKRQKGTFETGQEDSTDIPE 568
+ E+ +RQ E+ +PE
Sbjct: 704 E----NEIRRERERQTNPSAMEVEEDDPVPE 730
Score = 428 (155.7 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
Identities = 99/253 (39%), Positives = 148/253 (58%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E V +DD G +++E+V + L++ F+ G+ P+G+LL+GPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A E G FF NG + + G + S ++ F A AP+IIFIDE+DAI KR
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 313
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
+ G ER + Q+LT MDG K + V+V+ ATNR + +DPAL R GRFD+ V +G
Sbjct: 314 -EKTHGEVERRI-VSQLLTLMDGLK-QRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 370
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
+P GR IL++H +N DV L+++A T GA+L + +EA + RK
Sbjct: 371 IPDSTGRLEILQIHTKNMKLSD----DVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 537 LDYIG-QEELLEA 548
+D I ++E ++A
Sbjct: 427 MDLIDLEDETIDA 439
Score = 44 (20.5 bits), Expect = 5.3e-44, Sum P(2) = 5.3e-44
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 825 ASMEVEEDNQKPQLLMASHF 844
++MEVEED+ P++ HF
Sbjct: 718 SAMEVEEDDPVPEI-RRDHF 736
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 489 (177.2 bits), Expect = 5.4e-44, Sum P(2) = 5.4e-44
Identities = 108/271 (39%), Positives = 162/271 (59%)
Query: 299 ETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAK 357
E +T++D G + +KRELQE+V+ +++ ++F G+ KGVL +GPPG GKTLLAK
Sbjct: 470 EVPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 529
Query: 358 AIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGP 417
AIA E F + G + + M+ G + + V+++F AR AP ++F DE+D+I RGG
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG- 588
Query: 418 DIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGL 477
++G GG ++ + QILTEMDG S V +IGATNR DI+DPA+LR GR D+++ + L
Sbjct: 589 NVGDGGGAADRVINQILTEMDGMS-SKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 478 PSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDL 537
P + R AILK + R +S KDV L +A++T F+GA+L I A L R+ +
Sbjct: 648 PDEKSRIAILKANLR----KSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESI 703
Query: 538 DYIGQEELLEALKRQKGTFETGQEDSTDIPE 568
+ E+ +RQ E+ +PE
Sbjct: 704 E----NEIRRERERQTNPSAMEVEEDDPVPE 730
Score = 428 (155.7 bits), Expect = 8.3e-37, Sum P(2) = 8.3e-37
Identities = 99/253 (39%), Positives = 148/253 (58%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E V +DD G +++E+V + L++ F+ G+ P+G+LL+GPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A E G FF NG + + G + S ++ F A AP+IIFIDE+DAI KR
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 313
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
+ G ER + Q+LT MDG K + V+V+ ATNR + +DPAL R GRFD+ V +G
Sbjct: 314 -EKTHGEVERRI-VSQLLTLMDGLK-QRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 370
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
+P GR IL++H +N DV L+++A T GA+L + +EA + RK
Sbjct: 371 IPDATGRLEILQIHTKNMKLAD----DVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 537 LDYIG-QEELLEA 548
+D I ++E ++A
Sbjct: 427 MDLIDLEDETIDA 439
Score = 44 (20.5 bits), Expect = 5.4e-44, Sum P(2) = 5.4e-44
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 825 ASMEVEEDNQKPQLLMASHF 844
++MEVEED+ P++ HF
Sbjct: 718 SAMEVEEDDPVPEI-RKDHF 736
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 454 (164.9 bits), Expect = 6.3e-44, Sum P(2) = 6.3e-44
Identities = 106/277 (38%), Positives = 161/277 (58%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ +++ G REL+E + + L N E F GI PKGVLL+GPPGTGKTLLA
Sbjct: 131 EDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 190
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+AIA F + ++ ++G +A ++++F AR P IIF+DEIDAIG +R
Sbjct: 191 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFS 250
Query: 417 PDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVR 474
G A+RE + L+++L ++DGF + +V +I ATNR D+LDPALLR GR D+ +
Sbjct: 251 E---GTSADREIQRTLMELLNQLDGFD-NLGKVKMIMATNRPDVLDPALLRPGRLDRKIE 306
Query: 475 VGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTAR 534
+ LP++ R ILK+HA E D + I +L E F GA+L+NI EAG+ R
Sbjct: 307 IPLPNEQSRMDILKIHAAG--IAKHGEIDY--EAIVKLAEGFNGADLRNICTEAGMFAIR 362
Query: 535 KDLDYIGQEELLEALKR--QKGTFETGQEDSTDIPEE 569
+ DY+ E+ ++A+++ + E+ + D +E
Sbjct: 363 AERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 399
Score = 40 (19.1 bits), Expect = 6.3e-44, Sum P(2) = 6.3e-44
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 279 LQRRALGS-LGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKND 328
LQ + L S + +R A++ T DD + + + + E++R L N+
Sbjct: 23 LQHKELESRVRTARENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNE 73
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 488 (176.8 bits), Expect = 6.9e-44, Sum P(2) = 6.9e-44
Identities = 110/271 (40%), Positives = 162/271 (59%)
Query: 299 ETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAK 357
E VT++D G E +KRELQE+V+ +++ ++F G+ KGVL +GPPG GKTLLAK
Sbjct: 468 EVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 527
Query: 358 AIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGP 417
AIA E F + G + + M+ G + + V+++F AR AP ++F DE+D+I RGG
Sbjct: 528 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG- 586
Query: 418 DIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGL 477
+IG GG ++ + QILTEMDG + V +IGATNR DI+DPA+LR GR D+++ + L
Sbjct: 587 NIGDGGGAADRVINQILTEMDGMSTKKN-VFIIGATNRPDIIDPAILRPGRLDQLIYIPL 645
Query: 478 PSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDL 537
P + R AILK + R +S KDV L +A++T F+GA+L I A L R+ +
Sbjct: 646 PDEKSRVAILKANLR----KSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESI 701
Query: 538 DYIGQEELLEALKRQKGTFETGQEDSTDIPE 568
+ E+ +RQ E+ +PE
Sbjct: 702 E----SEIRRERERQTNPSAMEVEEDDPVPE 728
Score = 344 (126.2 bits), Expect = 2.6e-27, Sum P(2) = 2.6e-27
Identities = 88/254 (34%), Positives = 136/254 (53%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E V +DD G +++E+V + L++ F+ G+ P+G+LL+GPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A E G FF NG + + G S + + A + D S
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKSDDCFPS---- 311
Query: 417 PDIGGGGAEREQGLL-QILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRV 475
P G E E+ ++ Q+LT MDG K + V+V+ ATNR + +DPAL R GRFD+ V +
Sbjct: 312 PQTHG---EVERRIVSQLLTLMDGLK-QRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 367
Query: 476 GLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARK 535
G+P GR IL++H +N DV L+++A T GA+L + +EA + RK
Sbjct: 368 GIPDATGRLEILQIHTKNMKLAD----DVDLEQVANETHGHVGADLAALCSEAALQAIRK 423
Query: 536 DLDYIG-QEELLEA 548
+D I ++E ++A
Sbjct: 424 KMDLIDLEDETIDA 437
Score = 44 (20.5 bits), Expect = 6.9e-44, Sum P(2) = 6.9e-44
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 825 ASMEVEEDNQKPQLLMASHF 844
++MEVEED+ P++ HF
Sbjct: 716 SAMEVEEDDPVPEI-RRDHF 734
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 488 (176.8 bits), Expect = 7.5e-44, Sum P(2) = 7.5e-44
Identities = 110/271 (40%), Positives = 162/271 (59%)
Query: 299 ETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAK 357
E VT++D G E +KRELQE+V+ +++ ++F G+ KGVL +GPPG GKTLLAK
Sbjct: 474 EVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 533
Query: 358 AIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGP 417
AIA E F + G + + M+ G + + V+++F AR AP ++F DE+D+I RGG
Sbjct: 534 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG- 592
Query: 418 DIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGL 477
+IG GG ++ + QILTEMDG + V +IGATNR DI+DPA+LR GR D+++ + L
Sbjct: 593 NIGDGGGAADRVINQILTEMDGMSTKKN-VFIIGATNRPDIIDPAILRPGRLDQLIYIPL 651
Query: 478 PSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDL 537
P + R AILK + R +S KDV L +A++T F+GA+L I A L R+ +
Sbjct: 652 PDEKSRVAILKANLR----KSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESI 707
Query: 538 DYIGQEELLEALKRQKGTFETGQEDSTDIPE 568
+ E+ +RQ E+ +PE
Sbjct: 708 E----SEIRRERERQTNPSAMEVEEDDPVPE 734
Score = 423 (154.0 bits), Expect = 3.2e-36, Sum P(2) = 3.2e-36
Identities = 96/253 (37%), Positives = 145/253 (57%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E V +DD G +++E+V + L++ F+ G+ P+G+LL+GPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A E G FF NG + + G + S ++ F AP+IIFIDE+DAI S
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIASDDCF 315
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
P G + + Q+LT MDG K + V+V+ ATNR + +DPAL R GRFD+ V +G
Sbjct: 316 PSPQTHGEVERRIVSQLLTLMDGLK-QRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 374
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
+P GR IL++H +N DV L+++A T GA+L + +EA + RK
Sbjct: 375 IPDATGRLEILQIHTKNMKLAD----DVDLEQVANETHGHVGADLAALCSEAALQAIRKK 430
Query: 537 LDYIG-QEELLEA 548
+D I ++E ++A
Sbjct: 431 MDLIDLEDETIDA 443
Score = 44 (20.5 bits), Expect = 7.5e-44, Sum P(2) = 7.5e-44
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 825 ASMEVEEDNQKPQLLMASHF 844
++MEVEED+ P++ HF
Sbjct: 722 SAMEVEEDDPVPEI-RRDHF 740
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 487 (176.5 bits), Expect = 9.1e-44, Sum P(2) = 9.1e-44
Identities = 109/271 (40%), Positives = 162/271 (59%)
Query: 299 ETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAK 357
E VT++D G E +KRELQE+V+ +++ ++F G+ KGVL +GPPG GKTLLAK
Sbjct: 470 EVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 529
Query: 358 AIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGP 417
AIA E F + G + + M+ G + + V+++F AR AP ++F DE+D+I RGG
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG- 588
Query: 418 DIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGL 477
+IG GG ++ + QILTEMDG + + V +IGATNR DI+DPA+LR GR D+++ + L
Sbjct: 589 NIGDGGGAADRVINQILTEMDGMSIKKN-VFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 478 PSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDL 537
P + R AILK + R +S KDV + +A++T F+GA+L I A L R+ +
Sbjct: 648 PDEKSRMAILKANLR----KSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESI 703
Query: 538 DYIGQEELLEALKRQKGTFETGQEDSTDIPE 568
+ E+ RQ E+ +PE
Sbjct: 704 E----NEIRRERDRQTNPSAMEVEEDDPVPE 730
Score = 428 (155.7 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
Identities = 99/253 (39%), Positives = 148/253 (58%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E V +DD G +++E+V + L++ F+ G+ P+G+LL+GPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A E G FF NG + + G + S ++ F A AP+IIFIDE+DAI KR
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 313
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
+ G ER + Q+LT MDG K + V+V+ ATNR + +DPAL R GRFD+ V +G
Sbjct: 314 -EKTHGEVERRI-VSQLLTLMDGLK-QRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 370
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
+P GR IL++H +N DV L+++A T GA+L + +EA + RK
Sbjct: 371 IPDSTGRLEILQIHTKNMKLSD----DVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 537 LDYIG-QEELLEA 548
+D I ++E ++A
Sbjct: 427 MDLIDLEDETIDA 439
Score = 44 (20.5 bits), Expect = 9.1e-44, Sum P(2) = 9.1e-44
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 825 ASMEVEEDNQKPQLLMASHF 844
++MEVEED+ P++ HF
Sbjct: 718 SAMEVEEDDPVPEI-RRDHF 736
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 487 (176.5 bits), Expect = 9.3e-44, Sum P(2) = 9.3e-44
Identities = 109/271 (40%), Positives = 163/271 (60%)
Query: 299 ETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAK 357
E VT++D G E +KRELQ++V+ +++ ++F G+ KGVL +GPPG GKTLLAK
Sbjct: 470 EVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 529
Query: 358 AIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGP 417
AIA E F + G + + M+ G + + V+++F AR AP ++F DE+D+I RGG
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG- 588
Query: 418 DIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGL 477
+IG GG ++ + QILTEMDG + V +IGATNR DI+DPA+LR GR D+++ + L
Sbjct: 589 NIGDGGGAADRVINQILTEMDGMSTKKN-VFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 478 PSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDL 537
P + R AILK + R +S KDV L+ +A++T F+GA+L I A L R+ +
Sbjct: 648 PDEKSRVAILKANLR----KSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESI 703
Query: 538 DYIGQEELLEALKRQKGTFETGQEDSTDIPE 568
+ E+ +RQ E+ +PE
Sbjct: 704 E----SEIRRERERQTNPSAMEVEEDDPVPE 730
Score = 427 (155.4 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 99/253 (39%), Positives = 148/253 (58%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E V +DD G +++E+V + L++ F+ G+ P+G+LL+GPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A E G FF NG + + G + S ++ F A AP+IIFIDE+DAI KR
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 313
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
+ G ER + Q+LT MDG K + V+V+ ATNR + +DPAL R GRFD+ V +G
Sbjct: 314 -EKTHGEVERRI-VSQLLTLMDGLK-QRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 370
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
+P GR IL++H +N DV L+++A T GA+L + +EA + RK
Sbjct: 371 IPDATGRLEILQIHTKNMKLAD----DVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 537 LDYIG-QEELLEA 548
+D I ++E ++A
Sbjct: 427 MDLIDLEDETIDA 439
Score = 44 (20.5 bits), Expect = 9.3e-44, Sum P(2) = 9.3e-44
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 825 ASMEVEEDNQKPQLLMASHF 844
++MEVEED+ P++ HF
Sbjct: 718 SAMEVEEDDPVPEI-RRDHF 736
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 467 (169.5 bits), Expect = 1.2e-43, P = 1.2e-43
Identities = 107/259 (41%), Positives = 155/259 (59%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
+ E+ VT+ D G +E I++ L+E+V L + E+F N GI PKGVLL GPPGTGK
Sbjct: 164 MQVEDKPDVTYSDVGGCKEQIEK-LREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGK 222
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V++LF ARS +IF DEIDAIG
Sbjct: 223 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGG 282
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++ ++DGF + V+ ATNR D LDPAL+R GR D+
Sbjct: 283 ARFD-DGAGGDNEVQRTMLELINQLDGFD-PRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
V GLP +DGR I K+HAR+ E+D+ +A L + TGAE++++ EAG+
Sbjct: 341 VEFGLPDQDGRSHIFKIHARSM----SVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 533 ARKDLDYIGQEELLEALKR 551
R +++ LEA+K+
Sbjct: 397 IRARRKVATEKDFLEAVKK 415
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 485 (175.8 bits), Expect = 2.0e-43, P = 2.0e-43
Identities = 113/290 (38%), Positives = 170/290 (58%)
Query: 283 ALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKG 341
ALG+ S + + E V+++D G E +KRELQE V+ +++ E+F+ G+ KG
Sbjct: 458 ALGNSNPSALRE-TVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKG 516
Query: 342 VLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSI 401
VL +GPPG GKTLLAKAIA E F + G + + M+ G + + V+++F AR AP +
Sbjct: 517 VLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCV 576
Query: 402 IFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDP 461
+F DE+D+I ++RGG G GG ++ L Q+LTEMDG + V +IGATNR DI+D
Sbjct: 577 LFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKT-VFIIGATNRPDIIDS 635
Query: 462 ALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAEL 521
ALLR GR D+++ + LP +D R I K R +S KDV + +A+ T+ F+GA++
Sbjct: 636 ALLRPGRLDQLIYIPLPDEDSRLNIFKAALR----KSPIAKDVDIGALAKYTQGFSGADI 691
Query: 522 QNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELK 571
I A R+++ E+ +E KR+ E +ED D E+K
Sbjct: 692 TEICQRACKYAIRENI-----EKDIEKEKRRSENPEAMEEDGVDEVSEIK 736
Score = 440 (159.9 bits), Expect = 2.3e-38, P = 2.3e-38
Identities = 98/248 (39%), Positives = 150/248 (60%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E V +DD G +++E+V + L++ + F++ G+ PKG+LL+GPPG+GKTL+A
Sbjct: 199 ERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 258
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A E G FF NG + + G + S ++ F A APSIIFIDEID+I KR
Sbjct: 259 RAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR-- 316
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
+ G ER + Q+LT MDG K S + V+V+GATNR + +DPAL R GRFD+ + +G
Sbjct: 317 -EKTNGEVERRI-VSQLLTLMDGLK-SRAHVIVMGATNRPNSIDPALRRFGRFDREIDIG 373
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
+P + GR +L++H +N +DV L+ I++ T + GA+L + EA + R+
Sbjct: 374 VPDEIGRLEVLRIHTKNMKLA----EDVDLERISKDTHGYVGADLAALCTEAALQCIREK 429
Query: 537 LDYIGQEE 544
+D I E+
Sbjct: 430 MDVIDLED 437
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 465 (168.7 bits), Expect = 2.1e-43, P = 2.1e-43
Identities = 103/260 (39%), Positives = 160/260 (61%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+S E+ VT+ G REL+E++ + L N E F GI PKG LL+GPPGTGKT
Sbjct: 130 MSHEDPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKT 189
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+A+A + F + V+ ++G +A ++++F AR P IIF+DEIDAIG +
Sbjct: 190 LLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 249
Query: 414 RGGPDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDK 471
R G A+RE + L+++L +MDGF S QV +I ATNR D LDPALLR GR D+
Sbjct: 250 RFSE---GTSADREIQRTLMELLNQMDGFD-SLGQVKMIMATNRPDSLDPALLRPGRLDR 305
Query: 472 IVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGIL 531
+ + LP++ R ILK+HA + + ++ + I +L+++F GA+L+N+ EAG+
Sbjct: 306 KIEIPLPNEQARLEILKIHA----LKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLF 361
Query: 532 TARKDLDYIGQEELLEALKR 551
R + +Y+ Q + ++A+++
Sbjct: 362 AIRAEREYVIQGDFMKAVRK 381
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 465 (168.7 bits), Expect = 2.1e-43, P = 2.1e-43
Identities = 101/260 (38%), Positives = 162/260 (62%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+S E+ +++ D G REL+E+V + L N E F+ GI PKG LL GPPGTGKT
Sbjct: 139 MSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKT 198
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+A+A + F + V+ ++G +A ++++F AR P I+F+DEIDAIG +
Sbjct: 199 LLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGR 258
Query: 414 RGGPDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDK 471
R G A+RE + L+++L ++DGF S +V VI ATNR D LDPALLR GR D+
Sbjct: 259 RFSE---GTSADREIQRTLMELLNQLDGFD-SLGKVKVIMATNRPDTLDPALLRPGRLDR 314
Query: 472 IVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGIL 531
+ +GLP++ R ILK+H+ NK + E + + + +L++ F+ A+L+N+ EAG+
Sbjct: 315 KIEIGLPNEQSRLEILKIHS-NKITKHGE---IDFEAVVKLSDGFSAADLRNVCTEAGMF 370
Query: 532 TARKDLDYIGQEELLEALKR 551
R + +++ E+ ++A+++
Sbjct: 371 AIRAEREFVIDEDFMKAVRK 390
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 465 (168.7 bits), Expect = 2.1e-43, P = 2.1e-43
Identities = 101/260 (38%), Positives = 162/260 (62%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+S E+ +++ D G REL+E+V + L N E F+ GI PKG LL GPPGTGKT
Sbjct: 139 MSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKT 198
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+A+A + F + V+ ++G +A ++++F AR P I+F+DEIDAIG +
Sbjct: 199 LLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGR 258
Query: 414 RGGPDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDK 471
R G A+RE + L+++L ++DGF S +V VI ATNR D LDPALLR GR D+
Sbjct: 259 RFSE---GTSADREIQRTLMELLNQLDGFD-SLGKVKVIMATNRPDTLDPALLRPGRLDR 314
Query: 472 IVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGIL 531
+ +GLP++ R ILK+H+ NK + E + + + +L++ F+ A+L+N+ EAG+
Sbjct: 315 KIEIGLPNEQSRLEILKIHS-NKITKHGE---IDFEAVVKLSDGFSAADLRNVCTEAGMF 370
Query: 532 TARKDLDYIGQEELLEALKR 551
R + +++ E+ ++A+++
Sbjct: 371 AIRAEREFVIDEDFMKAVRK 390
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 480 (174.0 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
Identities = 108/271 (39%), Positives = 161/271 (59%)
Query: 299 ETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAK 357
E VT++D G E +KRELQE+V+ +++ ++F G+ KGVL +GPPG GKTLLAK
Sbjct: 470 EVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 529
Query: 358 AIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGP 417
AIA E F + G + + M+ G + + V+++F AR AP ++F DE+D+I RGG
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG- 588
Query: 418 DIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGL 477
+IG GG ++ + QILTEMDG + V +IGATNR DI+DPA+LR GR D+++ + L
Sbjct: 589 NIGDGGGAADRVINQILTEMDGMSTKKN-VFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 478 PSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDL 537
P + R AILK + R + DV L+ +A++T F+GA+L I A L R+ +
Sbjct: 648 PDEKSRVAILKANLRKSPVA--KAGDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESI 705
Query: 538 DYIGQEELLEALKRQKGTFETGQEDSTDIPE 568
+ E+ +RQ E+ +PE
Sbjct: 706 E----SEIRRERERQTNPSAMEVEEDDPVPE 732
Score = 427 (155.4 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 99/253 (39%), Positives = 148/253 (58%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E V +DD G +++E+V + L++ F+ G+ P+G+LL+GPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A E G FF NG + + G + S ++ F A AP+IIFIDE+DAI KR
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 313
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
+ G ER + Q+LT MDG K + V+V+ ATNR + +DPAL R GRFD+ V +G
Sbjct: 314 -EKTHGEVERRI-VSQLLTLMDGLK-QRAHVIVMAATNRPNSIDPALRRFGRFDREVDIG 370
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
+P GR IL++H +N DV L+++A T GA+L + +EA + RK
Sbjct: 371 IPDATGRLEILQIHTKNMKLAD----DVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 537 LDYIG-QEELLEA 548
+D I ++E ++A
Sbjct: 427 MDLIDLEDETIDA 439
Score = 44 (20.5 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 825 ASMEVEEDNQKPQLLMASHF 844
++MEVEED+ P++ HF
Sbjct: 720 SAMEVEEDDPVPEI-RRDHF 738
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 460 (167.0 bits), Expect = 7.2e-43, P = 7.2e-43
Identities = 98/248 (39%), Positives = 158/248 (63%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ T+D G + +E++E++ + +K+ E F++ GI PKGV+L+GPPGTGKTLLA
Sbjct: 136 EKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLA 195
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A F +G++ V+ ++G + V++LF AR APSIIF+DEID+IGS R
Sbjct: 196 RAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVE 255
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
GG +E ++ +L++L ++DGF+ S+ + +I ATNRLDILDPALLR GR D+ +
Sbjct: 256 GS-SGGDSEVQRTMLELLNQLDGFE-SSKDIKIIMATNRLDILDPALLRPGRIDRKIEFP 313
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
P+ R ILK+H+R+ + + L++IAE +GA+++ + EAG+ R+
Sbjct: 314 APTVAARTDILKIHSRSMNLT----RGINLRKIAEKMNGCSGADVKGVCTEAGMYALRER 369
Query: 537 LDYIGQEE 544
++ QE+
Sbjct: 370 RIHVTQED 377
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 459 (166.6 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 98/248 (39%), Positives = 157/248 (63%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ T+D G +E++E++ + +K+ E F++ GI PKGV+L+GPPGTGKTLLA
Sbjct: 140 EKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLA 199
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A F +G + V+ ++G + V++LF AR APSIIF+DEID+IGS R
Sbjct: 200 RAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVE 259
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
GGG +E ++ +L++L ++DGF+ S + + +I ATNRLDILDPALLR GR D+ +
Sbjct: 260 GS-GGGDSEVQRTMLELLNQLDGFETSKN-IKIIMATNRLDILDPALLRPGRIDRKIEFP 317
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
PS R IL++H+R + + + L+++AE +GA+++ + EAG+ R+
Sbjct: 318 PPSVAARAEILRIHSR----KMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRER 373
Query: 537 LDYIGQEE 544
++ QE+
Sbjct: 374 RIHVTQED 381
>RGD|727940 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA;ISO] [GO:0008089
"anterograde axon cargo transport" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382 RGD:727940
GO:GO:0016021 GO:GO:0005524 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49 MEROPS:M41.006
CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108 RefSeq:NP_852053.1
UniGene:Rn.16437 ProteinModelPortal:Q7TT47 SMR:Q7TT47 STRING:Q7TT47
PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754 GeneID:353231
KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619 ArrayExpress:Q7TT47
Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 469 (170.2 bits), Expect = 1.0e-42, Sum P(2) = 1.0e-42
Identities = 107/246 (43%), Positives = 143/246 (58%)
Query: 283 ALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGV 342
A L +R + + GV+F D AG K E++E V LK+ E F G PKG
Sbjct: 286 AFNQLKMARFTIVDGKTGKGVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGA 345
Query: 343 LLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSII 402
LL GPPG GKTLLAKA+A EA VPF A G +FVE+ G+ A+RV+ LF AR+ AP I+
Sbjct: 346 LLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIV 405
Query: 403 FIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPA 462
+IDEIDA+G KR G E EQ L Q+L EMDG + V+V+ +TNR D+LD A
Sbjct: 406 YIDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMGTA-DHVIVLASTNRADVLDNA 464
Query: 463 LLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTG-AEL 521
L+R GR D+ V + LP+ R I + H + + + Q +AELT F+G A+
Sbjct: 465 LMRPGRLDRHVFIDLPTLQERREIFEQHLKG--LKLTQPSSFYSQRLAELTPGFSGTAKK 522
Query: 522 QNILNE 527
IL++
Sbjct: 523 SKILSK 528
Score = 51 (23.0 bits), Expect = 1.0e-42, Sum P(2) = 1.0e-42
Identities = 22/106 (20%), Positives = 45/106 (42%)
Query: 660 SRLAEFLILQTGMT-AFGKAYYRNQSDLVPNLATK-----LEALRDEYMRFAVEKC---- 709
+R+A ++ Q GM + G + + + + + L+ + D R V +
Sbjct: 618 TRIAYSMVKQFGMAPSIGPVSFPEAQEGLVGIGRRPFSQGLQQMMDHEARLLVARAYRHT 677
Query: 710 ASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAPQIPQPAVSP 755
VL + ++ + + LLEK I E+I + P P+ ++P
Sbjct: 678 EKVLLDNLDKLQALANALLEKEVINYEDIEALIGPPPHGPKKMIAP 723
>UNIPROTKB|Q7TT47 [details] [associations]
symbol:Spg7 "Paraplegin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 RGD:727940 GO:GO:0016021 GO:GO:0005524
GO:GO:0031966 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 eggNOG:COG0465 GeneTree:ENSGT00530000063070
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49
MEROPS:M41.006 CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108
RefSeq:NP_852053.1 UniGene:Rn.16437 ProteinModelPortal:Q7TT47
SMR:Q7TT47 STRING:Q7TT47 PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754
GeneID:353231 KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619
ArrayExpress:Q7TT47 Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 469 (170.2 bits), Expect = 1.0e-42, Sum P(2) = 1.0e-42
Identities = 107/246 (43%), Positives = 143/246 (58%)
Query: 283 ALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGV 342
A L +R + + GV+F D AG K E++E V LK+ E F G PKG
Sbjct: 286 AFNQLKMARFTIVDGKTGKGVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGA 345
Query: 343 LLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSII 402
LL GPPG GKTLLAKA+A EA VPF A G +FVE+ G+ A+RV+ LF AR+ AP I+
Sbjct: 346 LLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIV 405
Query: 403 FIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPA 462
+IDEIDA+G KR G E EQ L Q+L EMDG + V+V+ +TNR D+LD A
Sbjct: 406 YIDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMGTA-DHVIVLASTNRADVLDNA 464
Query: 463 LLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTG-AEL 521
L+R GR D+ V + LP+ R I + H + + + Q +AELT F+G A+
Sbjct: 465 LMRPGRLDRHVFIDLPTLQERREIFEQHLKG--LKLTQPSSFYSQRLAELTPGFSGTAKK 522
Query: 522 QNILNE 527
IL++
Sbjct: 523 SKILSK 528
Score = 51 (23.0 bits), Expect = 1.0e-42, Sum P(2) = 1.0e-42
Identities = 22/106 (20%), Positives = 45/106 (42%)
Query: 660 SRLAEFLILQTGMT-AFGKAYYRNQSDLVPNLATK-----LEALRDEYMRFAVEKC---- 709
+R+A ++ Q GM + G + + + + + L+ + D R V +
Sbjct: 618 TRIAYSMVKQFGMAPSIGPVSFPEAQEGLVGIGRRPFSQGLQQMMDHEARLLVARAYRHT 677
Query: 710 ASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAPQIPQPAVSP 755
VL + ++ + + LLEK I E+I + P P+ ++P
Sbjct: 678 EKVLLDNLDKLQALANALLEKEVINYEDIEALIGPPPHGPKKMIAP 723
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 458 (166.3 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 104/257 (40%), Positives = 158/257 (61%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ V + + G REL+E++ + L N + F GI PKG LL+GPPGTGKTLLA
Sbjct: 134 EDPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLA 193
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+AIA + F + V+ ++G +A ++++FA AR P IIF+DEIDAIG +R
Sbjct: 194 RAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFS 253
Query: 417 PDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVR 474
G A+RE + L+++L +MDGF + QV +I ATNR D LDPALLR GR D+ +
Sbjct: 254 E---GTSADREIQRTLMELLNQMDGFD-ALGQVKMIMATNRPDTLDPALLRPGRLDRKLE 309
Query: 475 VGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTAR 534
+ LP++ R ILK+HA R E + + + +L++ F GA+L+NI EAG+ R
Sbjct: 310 IPLPNEVARMDILKIHAEPLNKRGEIDYEA----VVKLSDLFNGADLRNICTEAGLFALR 365
Query: 535 KDLDYIGQEELLEALKR 551
D +++ QE+ ++A+++
Sbjct: 366 CDREFVIQEDFMKAVRK 382
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 458 (166.3 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 100/248 (40%), Positives = 154/248 (62%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ T++ G + +E++E++ + +K+ E F GI PKGVLL GPPGTGKTLLA
Sbjct: 151 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLA 210
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A F +G++ V+ F+G A V++LF AR APSIIF+DEID+IGS R
Sbjct: 211 RAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVE 270
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
GG +E ++ +L++L ++DGF+ +T + VI ATNR+DILDPALLR GR D+ +
Sbjct: 271 GS-SGGDSEVQRTMLELLNQLDGFE-ATKNIKVIMATNRIDILDPALLRPGRIDRKIEFP 328
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
P + R ILK+H+R + + + +IAE +GAE++++ EAG+ R+
Sbjct: 329 APDEKARADILKIHSRKMNLM----RGINMAKIAEQIPGASGAEVKSVCTEAGMFALRER 384
Query: 537 LDYIGQEE 544
++ QE+
Sbjct: 385 RIHVTQED 392
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 456 (165.6 bits), Expect = 2.0e-42, P = 2.0e-42
Identities = 99/255 (38%), Positives = 161/255 (63%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ T++ G + +E++E++ + +K+ E F GI PKGVLL+GPPGTGKTLLA
Sbjct: 135 EKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLA 194
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A F +G++ V+ F+G + V++LF AR APSIIF+DEID+IGS R
Sbjct: 195 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSAR-- 252
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
+ G G +E ++ +L++L ++DGF+ +T + VI ATNR+D+LD ALLR GR D+ +
Sbjct: 253 LETGTGDSEVQRTMLELLNQLDGFE-ATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFP 311
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
P+++ R ILK+H+R + + + L++IAE +GAE++ + EAG+ R+
Sbjct: 312 PPNEEARLDILKIHSR----KMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRER 367
Query: 537 LDYIGQEELLEALKR 551
++ QE+ A+ +
Sbjct: 368 RVHVTQEDFEMAVSK 382
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 456 (165.6 bits), Expect = 2.0e-42, P = 2.0e-42
Identities = 105/277 (37%), Positives = 159/277 (57%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ V++ G REL+E + + L N E F GI PKGVLL+GPPGTGKTLLA
Sbjct: 132 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 191
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+AIA F + ++ ++G +A ++++F AR P IIF+DEIDAIG +R
Sbjct: 192 RAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFS 251
Query: 417 PDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVR 474
G A+RE + L+++L ++DGF +V +I ATNR D+LDPALLR GR D+ +
Sbjct: 252 E---GTSADREIQRTLMELLNQLDGFD-ELGKVKMIMATNRPDVLDPALLRPGRLDRKIE 307
Query: 475 VGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTAR 534
+ LP++ R +LK+HA E D + + +L E F GA+L+N+ EAG+ R
Sbjct: 308 IPLPNEQARMEVLKIHAAG--IAKHGEIDY--EAVVKLAEGFNGADLRNVCTEAGMAAIR 363
Query: 535 KDLDYIGQEELLEALKRQKGT--FETGQEDSTDIPEE 569
+ DY+ E+ ++A+++ E+ S D +E
Sbjct: 364 AERDYVVHEDFMKAVRKLNDAKKLESSAHYSADFGKE 400
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 456 (165.6 bits), Expect = 2.0e-42, P = 2.0e-42
Identities = 98/261 (37%), Positives = 156/261 (59%)
Query: 290 SRAKFISAEETTGVTFDDFAG-QEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPP 348
SR K + +E + D G + I+ + IV ++ ++F+ G+ PKG L+ GPP
Sbjct: 169 SRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPP 228
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLA+A A ++ F V+MF+G A V+D FA A+ +P+IIFIDE+D
Sbjct: 229 GTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELD 288
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR + G E ++ +L++L ++DGF S +V VI ATNR+D LDPALLR GR
Sbjct: 289 AIGTKRFDSE-KAGDREVQRTMLELLNQLDGFS-SDDRVKVIAATNRVDTLDPALLRSGR 346
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + LP+++ R IL++H+R + D+ +E+A T+++ GA L+++ EA
Sbjct: 347 LDRKLEFPLPNEEARVGILRIHSRKMAI----DDDINWEELARSTDEYNGAMLKSVCVEA 402
Query: 529 GILTARKDLDYIGQEELLEAL 549
G++ R+ I E ++ +
Sbjct: 403 GMIALRQGDTKINHEHFMDGI 423
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 454 (164.9 bits), Expect = 3.3e-42, P = 3.3e-42
Identities = 99/248 (39%), Positives = 154/248 (62%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ T++ G + +E++E++ + +K+ E F GI PKGVLL+GPPGTGKTLLA
Sbjct: 167 EKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 226
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A F +G++ V+ F+G A V++LF AR APSIIF+DEID+IGS R
Sbjct: 227 RAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVE 286
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
GG +E ++ +L++L ++DGF+ +T + VI ATNR+DILD ALLR GR D+ +
Sbjct: 287 GS-RGGDSEVQRTMLELLNQLDGFE-ATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 344
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
P + R ILK+H+R + + + +IAE +GAE++++ EAG+ R+
Sbjct: 345 APDEKARAQILKIHSRKMNLM----RGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRER 400
Query: 537 LDYIGQEE 544
++ QE+
Sbjct: 401 RIHVTQED 408
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 453 (164.5 bits), Expect = 4.2e-42, P = 4.2e-42
Identities = 99/260 (38%), Positives = 156/260 (60%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+S E+ + F G REL+E++ + LKN E FQ GI PKGVLL+GPPGTGKT
Sbjct: 126 MSLEDPGQINFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKT 185
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+A+A F + V+ ++G +A ++++F A+ P IIF+DEIDAIG +
Sbjct: 186 LLARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIGGR 245
Query: 414 RGGPDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDK 471
R G A+RE + L+++L ++DGF + +I ATNR D LDPALLR GR D+
Sbjct: 246 RFSE---GTSADREIQRTLMELLNQLDGFDY-LGKTKIIMATNRPDTLDPALLRAGRLDR 301
Query: 472 IVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGIL 531
+ + LP++ GR ILK+H+ + E D+ + + ++++ GA+L+N++ EAG+
Sbjct: 302 KIEIPLPNEVGRLEILKIHSSTV----QMEGDIDFESVVKMSDGLNGADLRNVVTEAGLF 357
Query: 532 TARKDLDYIGQEELLEALKR 551
+ D I Q++ A+++
Sbjct: 358 AIKDYRDAINQDDFNRAVRK 377
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 453 (164.5 bits), Expect = 4.2e-42, P = 4.2e-42
Identities = 102/259 (39%), Positives = 154/259 (59%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
+ EE +T+ D G +E I++ L+E+V + L + E+F N GI PKGVL++GPPGTGK
Sbjct: 159 MQVEEKPDITYKDVGGCKEQIEK-LREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGK 217
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V+DLF ARS IIF DE+DAIG
Sbjct: 218 TLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGG 277
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++ ++DGF + V+ ATNR D LDPALLR GR D+
Sbjct: 278 ARFD-DGAGGDNEVQRTMLELINQLDGFD-PRGNIKVLMATNRPDTLDPALLRPGRLDRK 335
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
V GLP +GR I +HA+ +D+ + +A L + TGA+++++ EAG+
Sbjct: 336 VEFGLPDLEGRAHIFTIHAKTMSCA----RDIRFELLARLCPNSTGADIRSVCTEAGMFA 391
Query: 533 ARKDLDYIGQEELLEALKR 551
R + +++ LEA+ +
Sbjct: 392 IRARRKVVSEKDFLEAIDK 410
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 453 (164.5 bits), Expect = 4.2e-42, P = 4.2e-42
Identities = 104/259 (40%), Positives = 153/259 (59%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
+ EE VT+ D G +E I++ L+E+V L + E F N GI PKGVLL GPPGTGK
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEK-LREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V++LF AR+ +IF DEIDAIG
Sbjct: 223 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++ ++DGF + V+ ATNR D LDPAL+R GR D+
Sbjct: 283 ARFD-DGAGGDNEVQRTMLELINQLDGFD-PRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
+ LP +GR ILK+HAR+ E+D+ + +A L + TGAE++++ EAG+
Sbjct: 341 IEFSLPDLEGRTHILKIHARSM----SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 533 ARKDLDYIGQEELLEALKR 551
R +++ LEA+ +
Sbjct: 397 IRARRKIATEKDFLEAVNK 415
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 473 (171.6 bits), Expect = 5.0e-42, P = 5.0e-42
Identities = 113/291 (38%), Positives = 167/291 (57%)
Query: 281 RRALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCP 339
R ALG+ S + + E VT+DD G + IK EL+E V + + +++Q G+
Sbjct: 464 RFALGNSNPSALRE-TVVENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPT 522
Query: 340 KGVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAP 399
KGVL GPPGTGKTLLAKA+A E F + G + + M+ G + S ++D+F AR+ AP
Sbjct: 523 KGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAP 582
Query: 400 SIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDIL 459
+++F+DE+D+I RGG GGA ++ + Q+LTEMDG + V VIGATNR D +
Sbjct: 583 TVVFLDELDSIAKARGGSHGDAGGAS-DRVVNQLLTEMDGMNAKKN-VFVIGATNRPDQI 640
Query: 460 DPALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGA 519
DPALLR GR D+++ V LP + R +IL+ RN + E + L EIA++T F+GA
Sbjct: 641 DPALLRPGRLDQLIYVPLPDEPARLSILQAQLRN----TPLEPGLDLNEIAKITHGFSGA 696
Query: 520 ELQNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQED-STDIPEE 569
+L I+ + + D I + + +K +K +T D D EE
Sbjct: 697 DLSYIVQRSAKFAIK---DSIEAQVKINKIKEEKEKVKTEDVDMKVDEVEE 744
Score = 450 (163.5 bits), Expect = 1.9e-39, P = 1.9e-39
Identities = 101/243 (41%), Positives = 149/243 (61%)
Query: 303 VTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAG 361
V +DD G + +++E+V + L++ + F++ GI PKG+L++GPPGTGKT++A+A+A
Sbjct: 212 VGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVAN 271
Query: 362 EAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGG 421
E G FF NG + + G + S ++ F A +PSIIFIDEID+I KR D
Sbjct: 272 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR---DKTN 328
Query: 422 GGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKD 481
G ER + Q+LT MDG K + S V+VI ATNR + +DPAL R GRFD+ V +G+P +
Sbjct: 329 GEVERRV-VSQLLTLMDGMK-ARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAE 386
Query: 482 GRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIG 541
GR IL++H +N DV L+ IA T F GA++ ++ +EA + R+ +D I
Sbjct: 387 GRLEILRIHTKNMKLAD----DVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLID 442
Query: 542 QEE 544
EE
Sbjct: 443 LEE 445
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 473 (171.6 bits), Expect = 5.0e-42, P = 5.0e-42
Identities = 113/291 (38%), Positives = 167/291 (57%)
Query: 281 RRALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCP 339
R ALG+ S + + E VT+DD G + IK EL+E V + + +++Q G+
Sbjct: 464 RFALGNSNPSALRE-TVVENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPT 522
Query: 340 KGVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAP 399
KGVL GPPGTGKTLLAKA+A E F + G + + M+ G + S ++D+F AR+ AP
Sbjct: 523 KGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAP 582
Query: 400 SIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDIL 459
+++F+DE+D+I RGG GGA ++ + Q+LTEMDG + V VIGATNR D +
Sbjct: 583 TVVFLDELDSIAKARGGSHGDAGGAS-DRVVNQLLTEMDGMNAKKN-VFVIGATNRPDQI 640
Query: 460 DPALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGA 519
DPALLR GR D+++ V LP + R +IL+ RN + E + L EIA++T F+GA
Sbjct: 641 DPALLRPGRLDQLIYVPLPDEPARLSILQAQLRN----TPLEPGLDLNEIAKITHGFSGA 696
Query: 520 ELQNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQED-STDIPEE 569
+L I+ + + D I + + +K +K +T D D EE
Sbjct: 697 DLSYIVQRSAKFAIK---DSIEAQVKINKIKEEKEKVKTEDVDMKVDEVEE 744
Score = 450 (163.5 bits), Expect = 1.9e-39, P = 1.9e-39
Identities = 101/243 (41%), Positives = 149/243 (61%)
Query: 303 VTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAG 361
V +DD G + +++E+V + L++ + F++ GI PKG+L++GPPGTGKT++A+A+A
Sbjct: 212 VGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVAN 271
Query: 362 EAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGG 421
E G FF NG + + G + S ++ F A +PSIIFIDEID+I KR D
Sbjct: 272 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR---DKTN 328
Query: 422 GGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKD 481
G ER + Q+LT MDG K + S V+VI ATNR + +DPAL R GRFD+ V +G+P +
Sbjct: 329 GEVERRV-VSQLLTLMDGMK-ARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAE 386
Query: 482 GRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIG 541
GR IL++H +N DV L+ IA T F GA++ ++ +EA + R+ +D I
Sbjct: 387 GRLEILRIHTKNMKLAD----DVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLID 442
Query: 542 QEE 544
EE
Sbjct: 443 LEE 445
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 452 (164.2 bits), Expect = 5.4e-42, P = 5.4e-42
Identities = 106/277 (38%), Positives = 160/277 (57%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ +++ G REL+E + + L N E F GI PKGVLL+GPPGTGKTLLA
Sbjct: 131 EDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 190
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+AIA F + ++ ++G +A ++++F AR P IIF+DEIDAIG +R
Sbjct: 191 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFS 250
Query: 417 PDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVR 474
G A+RE + L+++L ++DGF +V +I ATNR D+LDPALLR GR D+ +
Sbjct: 251 E---GTSADREIQRTLMELLNQLDGFD-QLGKVKMIMATNRPDVLDPALLRPGRLDRKIE 306
Query: 475 VGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTAR 534
+ LP++ R ILK+HA E D + I +L E F GA+L+NI EAG+ R
Sbjct: 307 IPLPNEQSRMEILKIHASG--IAKHGEIDY--EAIVKLGEGFNGADLRNICTEAGMFAIR 362
Query: 535 KDLDYIGQEELLEALKR--QKGTFETGQEDSTDIPEE 569
+ DY+ E+ ++A+++ + E+ + D +E
Sbjct: 363 AERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 399
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 426 (155.0 bits), Expect = 9.1e-42, Sum P(3) = 9.1e-42
Identities = 104/258 (40%), Positives = 153/258 (59%)
Query: 283 ALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKREL-QEIVRILKNDEEFQNKGIYCPKG 341
AL S+ S AK VT+ D E I+ EL I+ ++N ++F+ G+ P G
Sbjct: 283 ALSSVQPS-AKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAG 341
Query: 342 VLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSI 401
VLL GPPG GKTLLAKA+A E+G+ F + G + + M+VG + V+ +F A++ AP +
Sbjct: 342 VLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCV 401
Query: 402 IFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDP 461
IF DE+DA+ +R + G + + Q+LTEMDG + + QV ++ ATNR DI+DP
Sbjct: 402 IFFDEVDALCPRRSDRETGAS----VRVVNQLLTEMDGLE-ARQQVFIMAATNRPDIIDP 456
Query: 462 ALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIA-ELTED-FTGA 519
A+LR GR DK + VGLP R AILK +N + + DV L+ IA +L D +TGA
Sbjct: 457 AILRPGRLDKTLFVGLPPPADRLAILKTITKNGT-KPPLDADVNLEAIAGDLRCDCYTGA 515
Query: 520 ELQNILNEAGILTARKDL 537
+L ++ EA I R+++
Sbjct: 516 DLSALVREASICALRQEM 533
Score = 255 (94.8 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 81/246 (32%), Positives = 123/246 (50%)
Query: 335 GIYCPKGVLLHGPPG-TGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFAS 393
G+ C ++ H G + + + E +P + V G + ++++LF
Sbjct: 17 GLECNGAIMAHYSLNFPGSSGPPTSASRELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 76
Query: 394 ARSFAPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFK--VSTSQVLVIG 451
A S AP IIFIDEIDAI KR ++ ER + Q+LT MD +T++VLVIG
Sbjct: 77 AVSNAPCIIFIDEIDAITPKR---EVASKDMERRI-VAQLLTCMDDLNNVAATARVLVIG 132
Query: 452 ATNRLDILDPALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAE 511
ATNR D LDPAL R GRFD+ + +G+P + R IL+ R R + D +A
Sbjct: 133 ATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRK--LRLPQAFDFC--HLAH 188
Query: 512 LTEDFTGAELQNILNEAGILTARKDLDYIGQEEL----LEALKRQKGTFET--GQEDSTD 565
LT F GA+L + EA + + L + +++ +E L KG E G E +++
Sbjct: 189 LTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDLP-SKGVQEERLGTEPTSE 247
Query: 566 IPEELK 571
+EL+
Sbjct: 248 TQDELQ 253
Score = 39 (18.8 bits), Expect = 9.1e-42, Sum P(3) = 9.1e-42
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 91 NKLEELD---RKANVQLERQLVLA--SEWSR--VLMTMCGRLK 126
N+ + LD R+A + +R++ L E SR +L T+C +L+
Sbjct: 135 NRPDSLDPALRRAG-RFDREICLGIPDEASRERILQTLCRKLR 176
Score = 37 (18.1 bits), Expect = 9.1e-42, Sum P(3) = 9.1e-42
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 268 LGTPPQKTRQPLQRRALGSLGKSRAKFISAEETTG--VTFDDF 308
LGT P Q +R LG L +S E+ G + +DF
Sbjct: 240 LGTEPTSETQDELQRLLGLLRDQDP--LSEEQMQGLCIELNDF 280
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 472 (171.2 bits), Expect = 9.1e-42, Sum P(2) = 9.1e-42
Identities = 108/272 (39%), Positives = 164/272 (60%)
Query: 299 ETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAK 357
E T+ D G E +K+ELQE+V+ +++ ++F G+ +GVL +GPPG GKTLLAK
Sbjct: 467 EVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAK 526
Query: 358 AIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGP 417
AIA E F + G + + M+ G + + V+D+F ARS AP ++F DE+D+I RGG
Sbjct: 527 AIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGG- 585
Query: 418 DIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGL 477
++G G ++ + QILTEMDG + V +IGATNR DI+DPA+LR GR D+++ + L
Sbjct: 586 NVGDAGGAADRVINQILTEMDGMGAKKN-VFIIGATNRPDIIDPAILRPGRLDQLIYIPL 644
Query: 478 PSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDL 537
P R AILK + R +S K+V L IA++T+ F+GA+L I A L R+ +
Sbjct: 645 PDDKSREAILKANLR----KSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAI 700
Query: 538 DY-IGQEELLEALKRQKGTFETGQEDSTDIPE 568
+ I +E+ E + Q + ++D +PE
Sbjct: 701 EAEIRREK--ERAENQNSAMDMDEDDP--VPE 728
Score = 426 (155.0 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 96/248 (38%), Positives = 146/248 (58%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E V +DD G +++E+V + L++ F+ G+ P+G+L++GPPGTGKTL+A
Sbjct: 193 ESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIA 252
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A E G FF NG + + G + S ++ F A +P+IIFIDEIDAI KR
Sbjct: 253 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKR-- 310
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
D G ER + Q+LT MDG K S S ++V+ ATNR + +DPAL R GRFD+ + +G
Sbjct: 311 -DKTHGEVERRI-VSQLLTLMDGMKKS-SHLIVMAATNRPNSIDPALRRFGRFDREIDIG 367
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
+P GR +L++H +N DV L++IA + GA+L ++ +EA + R+
Sbjct: 368 IPDATGRLEVLRIHTKNMKLHD----DVDLEQIAAESHGHVGADLASLCSEAALQQIREK 423
Query: 537 LDYIGQEE 544
+D I E+
Sbjct: 424 MDLIDLED 431
Score = 42 (19.8 bits), Expect = 9.1e-42, Sum P(2) = 9.1e-42
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 817 RVEEIKAE---ASMEVEEDNQKPQLLMASHF 844
R E+ +AE ++M+++ED+ P++ A HF
Sbjct: 705 RREKERAENQNSAMDMDEDDPVPEITSA-HF 734
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 471 (170.9 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 108/287 (37%), Positives = 172/287 (59%)
Query: 283 ALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKG 341
ALG+ S + + E V+++D G E +KRELQE V+ +++ E+F+ G+ KG
Sbjct: 459 ALGNSNPSALRE-TVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKG 517
Query: 342 VLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSI 401
VL +GPPG GKTLLAKAIA E F + G + + M+ G + + V+++F AR AP +
Sbjct: 518 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCV 577
Query: 402 IFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDP 461
+F DE+D+I ++RG +G G ++ L Q+LTEMDG + V +IGATNR DI+DP
Sbjct: 578 LFFDELDSIATQRGN-SVGDAGGAADRVLNQLLTEMDGMNAKKT-VFIIGATNRPDIIDP 635
Query: 462 ALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAEL 521
ALLR GR D+++ + LP ++ R+ I K R +S KDV L+ +A+ T+ F+GA++
Sbjct: 636 ALLRPGRLDQLIYIPLPDEESRYQIFKSCLR----KSPVAKDVDLRALAKYTQGFSGADI 691
Query: 522 QNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPE 568
I + R++++ +++ + KR + E +ED +I E
Sbjct: 692 TEICQRSCKYAIRENIE----KDIEKERKRAESP-EAMEEDEEEIAE 733
Score = 434 (157.8 bits), Expect = 2.3e-37, Sum P(2) = 2.3e-37
Identities = 98/253 (38%), Positives = 153/253 (60%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E V +DD G +++E+V + L++ + F++ G+ PKG+LL+GPPG+GKTL+A
Sbjct: 200 ERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 259
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A E G FF NG + + G + S ++ F A APSIIFIDEID+I KR
Sbjct: 260 RAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR-- 317
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
+ G ER + Q+LT MDG K S + V+V+GATNR + +DPAL R GRFD+ + +G
Sbjct: 318 -EKTHGEVERRI-VSQLLTLMDGLK-SRAHVIVMGATNRPNSIDPALRRFGRFDREIDIG 374
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
+P + GR +L++H +N +DV L+ +++ T + GA+L + EA + R+
Sbjct: 375 VPDEIGRLEVLRIHTKNMKLA----EDVDLERVSKDTHGYVGADLAALCTEAALQCIREK 430
Query: 537 LDYIG-QEELLEA 548
+D I +E ++A
Sbjct: 431 MDVIDLDDEEIDA 443
Score = 43 (20.2 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 815 DKRVEEIKAEASMEVEEDNQKPQLLMASHF 844
D E +AE+ +EED ++ + A HF
Sbjct: 710 DIEKERKRAESPEAMEEDEEEIAEIKAGHF 739
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 449 (163.1 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 103/259 (39%), Positives = 152/259 (58%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
+ EE VT+ D G +E I++ L+E+V L + E F N GI PKGVLL GPPGTGK
Sbjct: 155 MQVEEKPDVTYSDVGGCKEQIEK-LREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 213
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V++LF AR+ +IF DEIDAIG
Sbjct: 214 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 273
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++ ++DGF + V+ ATNR D LDPAL+R GR D+
Sbjct: 274 ARFD-DGAGGDNEVQRTMLELINQLDGFD-PRGNIKVLMATNRPDTLDPALMRPGRLDRK 331
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
+ LP +GR I K+HAR+ E+D+ + +A L + TGAE++++ EAG+
Sbjct: 332 IEFSLPDLEGRTHIFKIHARSM----SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 387
Query: 533 ARKDLDYIGQEELLEALKR 551
R +++ LEA+ +
Sbjct: 388 IRARRKIATEKDFLEAVNK 406
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 449 (163.1 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 103/259 (39%), Positives = 152/259 (58%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
+ EE VT+ D G +E I++ L+E+V L + E F N GI PKGVLL GPPGTGK
Sbjct: 163 MQVEEKPDVTYSDVGGCKEQIEK-LREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 221
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V++LF AR+ +IF DEIDAIG
Sbjct: 222 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 281
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++ ++DGF + V+ ATNR D LDPAL+R GR D+
Sbjct: 282 ARFD-DGAGGDNEVQRTMLELINQLDGFD-PRGNIKVLMATNRPDTLDPALMRPGRLDRK 339
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
+ LP +GR I K+HAR+ E+D+ + +A L + TGAE++++ EAG+
Sbjct: 340 IEFSLPDLEGRTHIFKIHARSM----SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 395
Query: 533 ARKDLDYIGQEELLEALKR 551
R +++ LEA+ +
Sbjct: 396 IRARRKIATEKDFLEAVNK 414
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 449 (163.1 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 103/259 (39%), Positives = 152/259 (58%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
+ EE VT+ D G +E I++ L+E+V L + E F N GI PKGVLL GPPGTGK
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEK-LREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V++LF AR+ +IF DEIDAIG
Sbjct: 223 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++ ++DGF + V+ ATNR D LDPAL+R GR D+
Sbjct: 283 ARFD-DGAGGDNEVQRTMLELINQLDGFD-PRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
+ LP +GR I K+HAR+ E+D+ + +A L + TGAE++++ EAG+
Sbjct: 341 IEFSLPDLEGRTHIFKIHARSM----SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 533 ARKDLDYIGQEELLEALKR 551
R +++ LEA+ +
Sbjct: 397 IRARRKIATEKDFLEAVNK 415
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 449 (163.1 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 103/259 (39%), Positives = 152/259 (58%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
+ EE VT+ D G +E I++ L+E+V L + E F N GI PKGVLL GPPGTGK
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEK-LREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V++LF AR+ +IF DEIDAIG
Sbjct: 223 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++ ++DGF + V+ ATNR D LDPAL+R GR D+
Sbjct: 283 ARFD-DGAGGDNEVQRTMLELINQLDGFD-PRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
+ LP +GR I K+HAR+ E+D+ + +A L + TGAE++++ EAG+
Sbjct: 341 IEFSLPDLEGRTHIFKIHARSM----SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 533 ARKDLDYIGQEELLEALKR 551
R +++ LEA+ +
Sbjct: 397 IRARRKIATEKDFLEAVNK 415
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 449 (163.1 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 103/259 (39%), Positives = 152/259 (58%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
+ EE VT+ D G +E I++ L+E+V L + E F N GI PKGVLL GPPGTGK
Sbjct: 27 MQVEEKPDVTYSDVGGCKEQIEK-LREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 85
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V++LF AR+ +IF DEIDAIG
Sbjct: 86 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 145
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++ ++DGF + V+ ATNR D LDPAL+R GR D+
Sbjct: 146 ARFD-DGAGGDNEVQRTMLELINQLDGFD-PRGNIKVLMATNRPDTLDPALMRPGRLDRK 203
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
+ LP +GR I K+HAR+ E+D+ + +A L + TGAE++++ EAG+
Sbjct: 204 IEFSLPDLEGRTHIFKIHARSM----SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 259
Query: 533 ARKDLDYIGQEELLEALKR 551
R +++ LEA+ +
Sbjct: 260 IRARRKIATEKDFLEAVNK 278
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 449 (163.1 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 103/259 (39%), Positives = 152/259 (58%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
+ EE VT+ D G +E I++ L+E+V L + E F N GI PKGVLL GPPGTGK
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEK-LREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V++LF AR+ +IF DEIDAIG
Sbjct: 223 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++ ++DGF + V+ ATNR D LDPAL+R GR D+
Sbjct: 283 ARFD-DGAGGDNEVQRTMLELINQLDGFD-PRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
+ LP +GR I K+HAR+ E+D+ + +A L + TGAE++++ EAG+
Sbjct: 341 IEFSLPDLEGRTHIFKIHARSM----SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 533 ARKDLDYIGQEELLEALKR 551
R +++ LEA+ +
Sbjct: 397 IRARRKIATEKDFLEAVNK 415
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 449 (163.1 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 103/259 (39%), Positives = 152/259 (58%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
+ EE VT+ D G +E I++ L+E+V L + E F N GI PKGVLL GPPGTGK
Sbjct: 206 MQVEEKPDVTYSDVGGCKEQIEK-LREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 264
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V++LF AR+ +IF DEIDAIG
Sbjct: 265 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 324
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++ ++DGF + V+ ATNR D LDPAL+R GR D+
Sbjct: 325 ARFD-DGAGGDNEVQRTMLELINQLDGFD-PRGNIKVLMATNRPDTLDPALMRPGRLDRK 382
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
+ LP +GR I K+HAR+ E+D+ + +A L + TGAE++++ EAG+
Sbjct: 383 IEFSLPDLEGRTHIFKIHARSM----SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 438
Query: 533 ARKDLDYIGQEELLEALKR 551
R +++ LEA+ +
Sbjct: 439 IRARRKIATEKDFLEAVNK 457
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 449 (163.1 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 103/259 (39%), Positives = 152/259 (58%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
+ EE VT+ D G +E I++ L+E+V L + E F N GI PKGVLL GPPGTGK
Sbjct: 165 MQVEEKPDVTYSDVGGCKEQIEK-LREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 223
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V++LF AR+ +IF DEIDAIG
Sbjct: 224 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 283
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++ ++DGF + V+ ATNR D LDPAL+R GR D+
Sbjct: 284 ARFD-DGAGGDNEVQRTMLELINQLDGFD-PRGNIKVLMATNRPDTLDPALMRPGRLDRK 341
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
+ LP +GR I K+HAR+ E+D+ + +A L + TGAE++++ EAG+
Sbjct: 342 IEFSLPDLEGRTHIFKIHARSM----SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 397
Query: 533 ARKDLDYIGQEELLEALKR 551
R +++ LEA+ +
Sbjct: 398 IRARRKIATEKDFLEAVNK 416
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 449 (163.1 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 103/259 (39%), Positives = 152/259 (58%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
+ EE VT+ D G +E I++ L+E+V L + E F N GI PKGVLL GPPGTGK
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEK-LREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V++LF AR+ +IF DEIDAIG
Sbjct: 223 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++ ++DGF + V+ ATNR D LDPAL+R GR D+
Sbjct: 283 ARFD-DGAGGDNEVQRTMLELINQLDGFD-PRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
+ LP +GR I K+HAR+ E+D+ + +A L + TGAE++++ EAG+
Sbjct: 341 IEFSLPDLEGRTHIFKIHARSM----SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 533 ARKDLDYIGQEELLEALKR 551
R +++ LEA+ +
Sbjct: 397 IRARRKVATEKDFLEAVNK 415
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 449 (163.1 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 103/259 (39%), Positives = 152/259 (58%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
+ EE VT+ D G +E I++ L+E+V L + E F N GI PKGVLL GPPGTGK
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEK-LREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V++LF AR+ +IF DEIDAIG
Sbjct: 223 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++ ++DGF + V+ ATNR D LDPAL+R GR D+
Sbjct: 283 ARFD-DGAGGDNEVQRTMLELINQLDGFD-PRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
+ LP +GR I K+HAR+ E+D+ + +A L + TGAE++++ EAG+
Sbjct: 341 IEFSLPDLEGRTHIFKIHARSM----SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 533 ARKDLDYIGQEELLEALKR 551
R +++ LEA+ +
Sbjct: 397 IRARRKIATEKDFLEAVNK 415
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 449 (163.1 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 103/259 (39%), Positives = 152/259 (58%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
+ EE VT+ D G +E I++ L+E+V L + E F N GI PKGVLL GPPGTGK
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEK-LREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V++LF AR+ +IF DEIDAIG
Sbjct: 223 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++ ++DGF + V+ ATNR D LDPAL+R GR D+
Sbjct: 283 ARFD-DGAGGDNEVQRTMLELINQLDGFD-PRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
+ LP +GR I K+HAR+ E+D+ + +A L + TGAE++++ EAG+
Sbjct: 341 IEFSLPDLEGRTHIFKIHARSM----SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 533 ARKDLDYIGQEELLEALKR 551
R +++ LEA+ +
Sbjct: 397 IRARRKIATEKDFLEAVNK 415
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 449 (163.1 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 103/259 (39%), Positives = 152/259 (58%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
+ EE VT+ D G +E I++ L+E+V L + E F N GI PKGVLL GPPGTGK
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEK-LREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V++LF AR+ +IF DEIDAIG
Sbjct: 223 TLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++ ++DGF + V+ ATNR D LDPAL+R GR D+
Sbjct: 283 ARFD-DGAGGDNEVQRTMLELINQLDGFD-PRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
+ LP +GR I K+HAR+ E+D+ + +A L + TGAE++++ EAG+
Sbjct: 341 IEFSLPDLEGRTHIFKIHARSM----SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 533 ARKDLDYIGQEELLEALKR 551
R +++ LEA+ +
Sbjct: 397 IRARRKIATEKDFLEAVNK 415
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 449 (163.1 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 103/259 (39%), Positives = 152/259 (58%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
+ EE VT+ D G +E I++ L+E+V L + E F N GI PKGVLL GPPGTGK
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEK-LREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V++LF AR+ +IF DEIDAIG
Sbjct: 223 TLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++ ++DGF + V+ ATNR D LDPAL+R GR D+
Sbjct: 283 ARFD-DGAGGDNEVQRTMLELINQLDGFD-PRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
+ LP +GR I K+HAR+ E+D+ + +A L + TGAE++++ EAG+
Sbjct: 341 IEFSLPDLEGRTHIFKIHARSM----SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 533 ARKDLDYIGQEELLEALKR 551
R +++ LEA+ +
Sbjct: 397 IRARRKIATEKDFLEAVNK 415
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 449 (163.1 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 103/259 (39%), Positives = 152/259 (58%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
+ EE VT+ D G +E I++ L+E+V L + E F N GI PKGVLL GPPGTGK
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEK-LREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V++LF AR+ +IF DEIDAIG
Sbjct: 223 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++ ++DGF + V+ ATNR D LDPAL+R GR D+
Sbjct: 283 ARFD-DGAGGDNEVQRTMLELINQLDGFD-PRGNIKVLMATNRPDTLDPALMRPGRLDRK 340
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
+ LP +GR I K+HAR+ E+D+ + +A L + TGAE++++ EAG+
Sbjct: 341 IEFSLPDLEGRTHIFKIHARSM----SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 533 ARKDLDYIGQEELLEALKR 551
R +++ LEA+ +
Sbjct: 397 IRARRKIATEKDFLEAVNK 415
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 469 (170.2 bits), Expect = 1.3e-41, P = 1.3e-41
Identities = 114/283 (40%), Positives = 165/283 (58%)
Query: 281 RRALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCP 339
R ALGS S + + E V ++D G E +KREL+E V++ + E+F G+
Sbjct: 473 RFALGSSNPSALRE-TVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPS 531
Query: 340 KGVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAP 399
KGVL GPPGTGKTLLAKAIA E F + G + + M+ G + S V+D+F AR+ AP
Sbjct: 532 KGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAP 591
Query: 400 SIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDIL 459
++F+DE+D+I RG GG +R Q+LTEMDG S V VIGATNR D +
Sbjct: 592 CVVFLDELDSIAKARGASAGDSGGGDRVVN--QLLTEMDGVN-SKKNVFVIGATNRPDQI 648
Query: 460 DPALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGA 519
DPAL+R GR D+++ V LP ++ RF+IL+ R+ + +DV L+ +A+ T F+GA
Sbjct: 649 DPALMRPGRLDQLIYVPLPDEEARFSILQTQLRH----TPVAEDVDLRAVAKATHGFSGA 704
Query: 520 ELQNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQED 562
+L+ ++ A + A KD + E +KR+ T E +D
Sbjct: 705 DLEFVVQRA-VKLAIKD-------SIEEDIKRENETGEAPADD 739
Score = 432 (157.1 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 97/243 (39%), Positives = 148/243 (60%)
Query: 303 VTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAG 361
V +DD G +++E+V + L++ + F++ GI P+G+L++GPPGTGKTL+A+A+A
Sbjct: 221 VGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 280
Query: 362 EAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGG 421
E G FF NG + + G + S ++ F A +P+IIFIDEID+I KR +
Sbjct: 281 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR---EKTN 337
Query: 422 GGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKD 481
G ER + Q+LT MDG K + S V+V+ ATNR + +DPAL R GRFD+ V VG+P
Sbjct: 338 GEVERRV-VSQLLTLMDGMK-ARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPT 395
Query: 482 GRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIG 541
GR IL++H +N DV L++IA T + G++L ++ +EA + R+ +D I
Sbjct: 396 GRLEILRIHTKNMKLAD----DVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMID 451
Query: 542 QEE 544
+E
Sbjct: 452 LDE 454
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 447 (162.4 bits), Expect = 1.9e-41, P = 1.9e-41
Identities = 99/259 (38%), Positives = 156/259 (60%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
++ EE VT++D G +E I++ ++E+V + + + E+F GI PKGVL +GPPGTGK
Sbjct: 157 MTVEEKPDVTYNDVGGCKEQIEK-MREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGK 215
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TLLA+A+A F G++ V+ +VG A V++LF ARS I+F DE+DAIG
Sbjct: 216 TLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGG 275
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R +GG E ++ +L+I+ ++DGF + + V+ ATNR D LDPALLR GR D+
Sbjct: 276 ARFDDGVGGDN-EVQRTMLEIVNQLDGFD-ARGNIKVLMATNRPDTLDPALLRPGRLDRK 333
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
V GLP + R I K+H R E+D+ + +A L + TGA+++++ EAG+
Sbjct: 334 VEFGLPDLESRTQIFKIHTRTMNC----ERDIRFELLARLCPNSTGADIRSVCTEAGMYA 389
Query: 533 ARKDLDYIGQEELLEALKR 551
R + +++ L+A+ +
Sbjct: 390 IRARRKTVTEKDFLDAVNK 408
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 466 (169.1 bits), Expect = 2.6e-41, P = 2.6e-41
Identities = 130/353 (36%), Positives = 195/353 (55%)
Query: 281 RRALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCP 339
R AL +L A + E T++D G E +KREL+E V+ +++ E+F+ G+
Sbjct: 451 RTAL-TLSNPSALRETVVEVPTTTWEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPS 509
Query: 340 KGVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAP 399
KGVL +GPPG GKTLLAKAIA E F + G + + M+ G + + V++LF AR AP
Sbjct: 510 KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRELFDKARQAAP 569
Query: 400 SIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDIL 459
++F DE+D+I RG GGA ++ + QILTEMDG + V +IGATNR DI+
Sbjct: 570 CVLFFDELDSIARSRGSSQGDAGGAG-DRVINQILTEMDGMNAKKN-VFIIGATNRPDII 627
Query: 460 DPALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGA 519
DPA+LR GR D+++ + LP R AILK NK S KDV L+ + + T+ F+GA
Sbjct: 628 DPAILRPGRLDQLIYIPLPDLPSRVAILKA-CLNK---SPVAKDVDLEFLGQKTQGFSGA 683
Query: 520 ELQNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQED-STD-IPEELK--LRLA 575
+L I A L R+ + E+ +E+ K ++ + +T ED S D +PE + + A
Sbjct: 684 DLTEICQRACKLAIRESI-----EKDIESTKARQESGDTKMEDDSVDPVPEITRDHFQEA 738
Query: 576 YREAAVAVLACHLPDPYRPIIETDIKSIRSQPNMRYA--EISGRVFSRKNDYL 626
R A +V + Y +T ++S N ++ E SG+ ++D L
Sbjct: 739 MRSARRSVSDNDIRK-YESFAQTLVQSRGLGNNFKFPDQESSGQFNQDQSDDL 790
Score = 428 (155.7 bits), Expect = 4.7e-37, P = 4.7e-37
Identities = 100/263 (38%), Positives = 153/263 (58%)
Query: 303 VTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAG 361
V +DD G +++E+V + L++ + F+N G+ PKG+LL+GPPG GKT++A+A+A
Sbjct: 199 VGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVAN 258
Query: 362 EAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGG 421
E G FF NG + + G + S ++ F A APSIIFIDEID+I KR
Sbjct: 259 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTQ--- 315
Query: 422 GGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKD 481
G ER + Q+LT MDG K S + V+V+GATNR + +DPAL R GRFD+ + + +P
Sbjct: 316 GEVERRI-VSQLLTLMDGLK-SRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDAT 373
Query: 482 GRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIG 541
GR I+++H +N + +E D L+ +A T + GA+L + E+ + R+ +D I
Sbjct: 374 GRLEIMRIHTKN--MKLDETVD--LEAVANETHGYVGADLAALCTESALQCIREKMDVID 429
Query: 542 QE------ELLEALKRQKGTFET 558
E E+LE++ + F T
Sbjct: 430 LEDETISAEILESMSVTQDHFRT 452
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 466 (169.1 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 108/272 (39%), Positives = 161/272 (59%)
Query: 299 ETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAK 357
E V ++D G + +KRELQE+V+ ++ ++F G+ +GVL +GPPG GKTLLAK
Sbjct: 472 EVPHVNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAK 531
Query: 358 AIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGP 417
AIA E F + G + + M+ G + + V+D+F AR AP I+F DE+D+I RGG
Sbjct: 532 AIANECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGG- 590
Query: 418 DIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGL 477
G G ++ + QILTEMDG + V +IGATNR DI+DPA+LR GR D+++ + L
Sbjct: 591 GAGDAGGAADRVINQILTEMDGM-TNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 649
Query: 478 PSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDL 537
P R AIL+ + R +S KDV L ++++TE F+GA+L I A L R+ +
Sbjct: 650 PDMPSRTAILRANLR----KSPVAKDVDLMYLSKITEGFSGADLTEICQRACKLAIREAI 705
Query: 538 DYIGQEELLEALKRQKGTFETGQEDSTD-IPE 568
E + A ++++ ET +D D +PE
Sbjct: 706 -----EAEIRAERQRQARKETAMDDDYDPVPE 732
Score = 407 (148.3 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 96/248 (38%), Positives = 144/248 (58%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E + +DD G +++E+V + L++ F+ G+ P+G+LL+GPPGTGKTL+A
Sbjct: 198 ESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVA 257
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A E G FF NG + + G + S ++ F A AP+IIFIDE+DAI KR
Sbjct: 258 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 315
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
+ G ER + Q+LT MDG K + V+V+ ATNR + +D AL R GRFD+ + +G
Sbjct: 316 -EKTHGEVERRI-VSQLLTLMDGLK-QRAHVVVMAATNRPNSVDAALRRFGRFDREIDIG 372
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
+P GR IL++H +N SE DV L++I+ T GA+L + +EA + RK
Sbjct: 373 IPDSTGRLEILQIHTKNMKL-SE---DVDLEQISAETHGHVGADLAALCSEAALQAIRKK 428
Query: 537 LDYIGQEE 544
+ I E+
Sbjct: 429 MTLIDLED 436
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 445 (161.7 bits), Expect = 3.1e-41, P = 3.1e-41
Identities = 102/253 (40%), Positives = 149/253 (58%)
Query: 290 SRAKFISAEETTGVTFDDFAGQEYIKRELQE-IVRILKNDEEFQNKGIYCPKGVLLHGPP 348
SR K + +E + D G + +EL E IV + + E+F+N GI PKGVL++GPP
Sbjct: 154 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 213
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLA+A A + F G V+MF+G A V+D FA A+ APSIIFIDE+D
Sbjct: 214 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 273
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AIG+KR + G E ++ +L++L ++DGF+ + QV VI ATNR+DILDPALLR GR
Sbjct: 274 AIGTKRFDSE-KAGDREVQRTMLELLNQLDGFQPNM-QVKVIAATNRVDILDPALLRSGR 331
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + +P+++ R I+++H+R + DV +E+A + EA
Sbjct: 332 LDRKIEFPMPNEEARARIMQIHSR----KMNVSPDVNYEELARCPTISMALSAKQFGVEA 387
Query: 529 GILTARKDLDYIG 541
G++ R+ G
Sbjct: 388 GMIALRRGATEFG 400
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 445 (161.7 bits), Expect = 3.1e-41, P = 3.1e-41
Identities = 103/259 (39%), Positives = 155/259 (59%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
+ EE VT+ D G +E I+R L+E+V + L + E F GI PKG++L+GPPGTGK
Sbjct: 168 MQVEEKPDVTYGDVGGCKEQIER-LREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGK 226
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V++LF AR+ IIF DEIDAIG
Sbjct: 227 TLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGG 286
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++T++DGF + V+ ATNR + LD AL+R GR D+
Sbjct: 287 ARFD-DGAGGDNEVQRTMLELITQLDGFD-PRGNIKVLFATNRPNTLDEALMRPGRIDRK 344
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
V GLP +GR IL++HA++ +KD+ + IA L TGAEL+++ EAG+
Sbjct: 345 VEFGLPDLEGRAHILRIHAKSMAI----DKDIRWELIARLCPSQTGAELRSVCTEAGMFA 400
Query: 533 ARKDLDYIGQEELLEALKR 551
R +++ L+A+++
Sbjct: 401 IRARRRVATEKDFLDAVQK 419
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 465 (168.7 bits), Expect = 3.7e-41, P = 3.7e-41
Identities = 112/300 (37%), Positives = 174/300 (58%)
Query: 283 ALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKG 341
ALG+ S + + E V+++D G E +KRELQE V+ +++ E+F+ G+ KG
Sbjct: 458 ALGNSNPSALRE-TVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKG 516
Query: 342 VLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSI 401
VL +GPPG GKTLLAKAIA E F + G + + M+ G + + V+++F AR AP +
Sbjct: 517 VLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCV 576
Query: 402 IFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDP 461
+F DE+D+I ++RG G G ++ L Q+LTEMDG + V +IGATNR DI+D
Sbjct: 577 LFFDELDSIATQRGN-SAGDAGGAADRVLNQLLTEMDGMNAKKT-VFIIGATNRPDIIDS 634
Query: 462 ALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAEL 521
ALLR GR D+++ + LP +D R I K R +S KDV + +A+ T+ F+GA++
Sbjct: 635 ALLRPGRLDQLIYIPLPDEDSRLNIFKACLR----KSPVAKDVDVTALAKYTQGFSGADI 690
Query: 522 QNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAV 581
I A R+++ E+ +E +R+ E +ED D E ++R A+ E ++
Sbjct: 691 TEICQRACKYAIRENI-----EKDIENERRRSQNPEAMEEDMVD-DEVSEIRAAHFEESM 744
Score = 439 (159.6 bits), Expect = 3.0e-38, P = 3.0e-38
Identities = 98/248 (39%), Positives = 150/248 (60%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E V +DD G +++E+V + L++ + F++ G+ PKG+LL+GPPG+GKTL+A
Sbjct: 199 ERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 258
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A E G FF NG + + G + S ++ F A APSIIFIDEID+I KR
Sbjct: 259 RAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR-- 316
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
+ G ER + Q+LT MDG K S + V+V+GATNR + +DPAL R GRFD+ + +G
Sbjct: 317 -EKTNGEVERRI-VSQLLTLMDGLK-SRAHVIVMGATNRPNSIDPALRRFGRFDREIDIG 373
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
+P + GR +L++H +N +DV L+ I++ T + GA+L + EA + R+
Sbjct: 374 VPDEIGRLEVLRIHTKNMKLA----EDVDLERISKDTHGYVGADLAALCTEAALQCIREK 429
Query: 537 LDYIGQEE 544
+D I E+
Sbjct: 430 MDVIDLED 437
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 464 (168.4 bits), Expect = 4.8e-41, P = 4.8e-41
Identities = 110/285 (38%), Positives = 166/285 (58%)
Query: 288 GKSRAKFI--SAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLL 344
GKS + + ET T+ D G + +KRELQE+V+ +++ E++ G+ +GVL
Sbjct: 463 GKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLF 522
Query: 345 HGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFI 404
+GPPG GKTLLAKAIA E F + G + + M+ G + + V+D+F AR+ AP ++F
Sbjct: 523 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFF 582
Query: 405 DEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALL 464
DE+D+I RGG G GG ++ + Q+LTEMDG + V +IGATNR DI+DPA+L
Sbjct: 583 DELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKN-VFIIGATNRPDIIDPAVL 641
Query: 465 RKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNI 524
R GR D+++ + LP + R ILK R ++ KD+ L +A+ T F+GA+L I
Sbjct: 642 RPGRLDQLIYIPLPDEASRHQILKASLR----KTPLSKDLDLTFLAKNTVGFSGADLTEI 697
Query: 525 LNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTD-IPE 568
A L R+ ++ + E E RQ E ++D+ D +PE
Sbjct: 698 CQRACKLAIRESIEKEIRIEK-ERQDRQARGEELMEDDAVDPVPE 741
Score = 401 (146.2 bits), Expect = 4.9e-34, P = 4.9e-34
Identities = 94/248 (37%), Positives = 142/248 (57%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E + +DD G +++E+V + L++ + F+ GI P+G+LL GPPGTGKTL+A
Sbjct: 202 ESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIA 261
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A E G FF NG + + G + S ++ F P+I+FIDEIDAI KR
Sbjct: 262 RAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKR-- 319
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
+ G ER + Q+LT MDG K S ++VI ATNR + +D AL R GRFD+ + +G
Sbjct: 320 -EKTNGEVERRI-VSQLLTLMDGVK-GRSNLVVIAATNRPNSIDGALRRFGRFDREIDIG 376
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
+P GR IL++H +N DV L++IA F GA+L ++ +EA + R+
Sbjct: 377 IPDAVGRLEILRIHTKNMKLAD----DVDLEQIANECHGFVGADLASLCSEAALQQIREK 432
Query: 537 LDYIGQEE 544
++ I E+
Sbjct: 433 MELIDLED 440
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 464 (168.4 bits), Expect = 4.8e-41, P = 4.8e-41
Identities = 110/285 (38%), Positives = 166/285 (58%)
Query: 288 GKSRAKFI--SAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLL 344
GKS + + ET T+ D G + +KRELQE+V+ +++ E++ G+ +GVL
Sbjct: 463 GKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLF 522
Query: 345 HGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFI 404
+GPPG GKTLLAKAIA E F + G + + M+ G + + V+D+F AR+ AP ++F
Sbjct: 523 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFF 582
Query: 405 DEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALL 464
DE+D+I RGG G GG ++ + Q+LTEMDG + V +IGATNR DI+DPA+L
Sbjct: 583 DELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKN-VFIIGATNRPDIIDPAVL 641
Query: 465 RKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNI 524
R GR D+++ + LP + R ILK R ++ KD+ L +A+ T F+GA+L I
Sbjct: 642 RPGRLDQLIYIPLPDEASRHQILKASLR----KTPLSKDLDLTFLAKNTVGFSGADLTEI 697
Query: 525 LNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTD-IPE 568
A L R+ ++ + E E RQ E ++D+ D +PE
Sbjct: 698 CQRACKLAIRESIEKEIRIEK-ERQDRQARGEELMEDDAVDPVPE 741
Score = 401 (146.2 bits), Expect = 4.9e-34, P = 4.9e-34
Identities = 94/248 (37%), Positives = 142/248 (57%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E + +DD G +++E+V + L++ + F+ GI P+G+LL GPPGTGKTL+A
Sbjct: 202 ESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIA 261
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A E G FF NG + + G + S ++ F P+I+FIDEIDAI KR
Sbjct: 262 RAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKR-- 319
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
+ G ER + Q+LT MDG K S ++VI ATNR + +D AL R GRFD+ + +G
Sbjct: 320 -EKTNGEVERRI-VSQLLTLMDGVK-GRSNLVVIAATNRPNSIDGALRRFGRFDREIDIG 376
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
+P GR IL++H +N DV L++IA F GA+L ++ +EA + R+
Sbjct: 377 IPDAVGRLEILRIHTKNMKLAD----DVDLEQIANECHGFVGADLASLCSEAALQQIREK 432
Query: 537 LDYIGQEE 544
++ I E+
Sbjct: 433 MELIDLED 440
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 443 (161.0 bits), Expect = 5.2e-41, P = 5.2e-41
Identities = 103/266 (38%), Positives = 157/266 (59%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
++ EE VT+ D G +E I++ L+E+V + L + E F GI PKG+LL+GPPGTGK
Sbjct: 175 MTVEEKPDVTYSDVGGCKEQIEK-LREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGK 233
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V++LF AR+ IIF DE+DAIG
Sbjct: 234 TLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAIGG 293
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++T++DGF + V+ ATNR + LDPALLR GR D+
Sbjct: 294 ARFD-DGAGGDNEVQRTMLELITQLDGFD-PRGNIKVMFATNRPNTLDPALLRPGRIDRK 351
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
V LP +GR I ++H++ EKD+ + I+ L + TGAEL+++ EAG+
Sbjct: 352 VEFSLPDLEGRANIFRIHSKTM----SVEKDIRWELISRLCPNATGAELRSVCTEAGMFA 407
Query: 533 ARKDLDYIGQEELLEALKRQ-KGTFE 557
R +++ L+A+ + KG +
Sbjct: 408 IRARRKVANEKDFLKAVDKVIKGNLK 433
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 463 (168.0 bits), Expect = 6.5e-41, P = 6.5e-41
Identities = 113/294 (38%), Positives = 167/294 (56%)
Query: 281 RRALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCP 339
R ALG S + ++ E V ++D G + +K++L+E V+ + + E+F G+
Sbjct: 471 RFALGVSNPSALREVAVVEVPNVRWEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPS 530
Query: 340 KGVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAP 399
+GVL +GPPGTGKT+LAKA+A E F + G + + M+ G + S ++D+F AR+ AP
Sbjct: 531 RGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAP 590
Query: 400 SIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDIL 459
I+F+DE+D+I RGG +G G ++ + Q+LTEMDG S V VIGATNR + L
Sbjct: 591 CIVFLDELDSIAKARGG-SVGDAGGASDRVVNQLLTEMDGM-TSKKNVFVIGATNRPEQL 648
Query: 460 DPALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGA 519
DPAL R GR D ++ V LP + GR +ILK R ++ DV LQ IA T F+GA
Sbjct: 649 DPALCRPGRLDSLIYVPLPDELGRLSILKAQLR----KTPVSDDVDLQYIANKTHGFSGA 704
Query: 520 ELQNILNEAGILTARKDLDY-IGQEELLEALKRQKGTFETGQEDSTD-IPEELK 571
+L I A + ++ + I + + LEA G ED+ D +PE K
Sbjct: 705 DLGFITQRAVKIAIKESITADINRTKALEAA----GEDVPMDEDAEDPVPELTK 754
Score = 425 (154.7 bits), Expect = 1.1e-36, P = 1.1e-36
Identities = 97/243 (39%), Positives = 147/243 (60%)
Query: 303 VTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAG 361
V +DD G +++E+V + L++ + F++ GI P+GVLL+GPPGTGKTL+A+A+A
Sbjct: 219 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVAN 278
Query: 362 EAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGG 421
E G FF NG + + G + S ++ F A +P+IIFIDEID+I KR +
Sbjct: 279 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR---EKTN 335
Query: 422 GGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKD 481
G ER + Q+LT MDG K + S V+V+ ATNR + +DPAL R GRFD+ V +G+P
Sbjct: 336 GEVERRV-VSQLLTLMDGMK-ARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPT 393
Query: 482 GRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIG 541
GR IL++H +N DV L++IA T + G+++ + +EA + R+ +D I
Sbjct: 394 GRLEILQIHTKNMKLGD----DVDLEQIAAETHGYVGSDVAALCSEAAMQQIREKMDLID 449
Query: 542 QEE 544
+E
Sbjct: 450 LDE 452
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 441 (160.3 bits), Expect = 8.5e-41, P = 8.5e-41
Identities = 102/262 (38%), Positives = 149/262 (56%)
Query: 290 SRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPP 348
S A E+T TFDD G E +EL+E V + L + E ++ GI PKGV+L+G P
Sbjct: 167 SNAMGHKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEP 226
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLAKA+A F A G+D V+ G A V+ +F A+ APSI+FIDEID
Sbjct: 227 GTGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEID 286
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
A+G+KR G E ++ LL++L ++DGF+ S V +I ATNR+D LDPAL+R GR
Sbjct: 287 AVGTKRFDTS-SRGEQEVQRTLLELLNQLDGFE-SRGDVKIIMATNRIDSLDPALIRPGR 344
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
D+ + + P + R I +H +K V + + + +GAE++ + EA
Sbjct: 345 IDRKIELPKPDEKTRQKIFTIHTSGMTI----QKAVTYENVLGKEKSISGAEIKAVCTEA 400
Query: 529 GILTARKDLDYIGQEELLEALK 550
G+L R +G ++ +A+K
Sbjct: 401 GMLALRAQRKCVGTDDFEKAVK 422
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 440 (159.9 bits), Expect = 1.1e-40, P = 1.1e-40
Identities = 102/266 (38%), Positives = 158/266 (59%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
++ E+ VT+ D G +E I++ L+E+V + L + E F N GI PKG LL+GPPGTGK
Sbjct: 174 MTVEDKPDVTYGDVGGCKEQIEK-LREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGK 232
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V++LF AR+ IIF DEIDA+G
Sbjct: 233 TLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGG 292
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++T++DGF + + V+ ATNR LDPAL+R GR D+
Sbjct: 293 ARFD-DGAGGDNEVQRTMLELITQLDGFD-ARGNIKVMFATNRPSTLDPALMRPGRIDRK 350
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
+ LP +GR IL++HA++ E+D+ + I+ L + TGAEL+++ EAG+
Sbjct: 351 IEFSLPDVEGRANILRIHAKSM----SVERDIRWELISRLCPNATGAELRSVATEAGMFA 406
Query: 533 ARKDLDYIGQEELLEALKRQ-KGTFE 557
R +++ L A+ + KG +
Sbjct: 407 IRARRKVATEKDFLAAVDKVIKGNLK 432
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 439 (159.6 bits), Expect = 1.4e-40, P = 1.4e-40
Identities = 101/259 (38%), Positives = 152/259 (58%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
+ EE VT+ D G ++ I++ L+E+V L + E + N GI PKGVLL+GPPGTGK
Sbjct: 166 MQVEEKPDVTYSDVGGCKDQIEK-LREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGK 224
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V++LF AR+ +IF DEIDA+G
Sbjct: 225 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGG 284
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++ ++DGF + V+ ATNR D LDPAL+R GR D+
Sbjct: 285 ARFD-DGQGGDNEVQRTMLELINQLDGFD-PRGNIKVLMATNRPDTLDPALMRPGRLDRK 342
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
V LP GR ILK+HA+ + E+D+ +A L + TGAE++++ EAG+
Sbjct: 343 VEFALPDLAGRAHILKIHAK----QMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFA 398
Query: 533 ARKDLDYIGQEELLEALKR 551
R +++ LEA+ +
Sbjct: 399 IRARRKVATEKDFLEAINK 417
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 439 (159.6 bits), Expect = 1.4e-40, P = 1.4e-40
Identities = 101/259 (38%), Positives = 152/259 (58%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
+ EE VT+ D G ++ I++ L+E+V L + E + N GI PKGVLL+GPPGTGK
Sbjct: 166 MQVEEKPDVTYSDVGGCKDQIEK-LREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGK 224
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V++LF AR+ +IF DEIDA+G
Sbjct: 225 TLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGG 284
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++ ++DGF + V+ ATNR D LDPAL+R GR D+
Sbjct: 285 ARFD-DGQGGDNEVQRTMLELINQLDGFD-PRGNIKVLMATNRPDTLDPALMRPGRLDRK 342
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
V LP GR ILK+HA+ + E+D+ +A L + TGAE++++ EAG+
Sbjct: 343 VEFALPDLAGRAHILKIHAK----QMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFA 398
Query: 533 ARKDLDYIGQEELLEALKR 551
R +++ LEA+ +
Sbjct: 399 IRARRKVATEKDFLEAINK 417
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 438 (159.2 bits), Expect = 1.8e-40, P = 1.8e-40
Identities = 97/260 (37%), Positives = 161/260 (61%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+ E+ T++ G + +E++E++ + +K+ E F++ GI PKGVLL+GPPGTGKT
Sbjct: 168 MKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKT 227
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+A+A F +G++ V+ ++G + V++LF AR APSIIF+DEID+IGS+
Sbjct: 228 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQ 287
Query: 414 RGGPDIGG--GGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDK 471
R I G G +E ++ ++++L ++DGF+ ST + VI TNR+DILD ALLR GR D+
Sbjct: 288 R----IEGEHGDSEVQRTMMELLNQLDGFE-STQNIKVIMCTNRIDILDEALLRPGRIDR 342
Query: 472 IVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGIL 531
+ P+ + R ILK+H+R + + + +IA + +GAE++ + EAG+
Sbjct: 343 KIEFPNPNVEARMEILKIHSRKMNLM----RGIDMLKIATDMNNCSGAEVKAVCTEAGMF 398
Query: 532 TARKDLDYIGQEELLEALKR 551
R+ ++ QE+ A+ +
Sbjct: 399 ALRERRVHVTQEDFEMAVAK 418
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 438 (159.2 bits), Expect = 1.8e-40, P = 1.8e-40
Identities = 97/260 (37%), Positives = 161/260 (61%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+ E+ T++ G + +E++E++ + +K+ E F++ GI PKGVLL+GPPGTGKT
Sbjct: 168 MKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKT 227
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLA+A+A F +G++ V+ ++G + V++LF AR APSIIF+DEID+IGS+
Sbjct: 228 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQ 287
Query: 414 RGGPDIGG--GGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDK 471
R I G G +E ++ ++++L ++DGF+ ST + VI TNR+DILD ALLR GR D+
Sbjct: 288 R----IEGEHGDSEVQRTMMELLNQLDGFE-STQNIKVIMCTNRIDILDEALLRPGRIDR 342
Query: 472 IVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGIL 531
+ P+ + R ILK+H+R + + + +IA + +GAE++ + EAG+
Sbjct: 343 KIEFPNPNVEARMEILKIHSRKMNLM----RGIDMLKIATDMNNCSGAEVKAVCTEAGMF 398
Query: 532 TARKDLDYIGQEELLEALKR 551
R+ ++ QE+ A+ +
Sbjct: 399 ALRERRVHVTQEDFEMAVAK 418
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 437 (158.9 bits), Expect = 2.3e-40, P = 2.3e-40
Identities = 100/269 (37%), Positives = 157/269 (58%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+ E+ T+ D G + +E++E V + L + E ++ GI PKGV+L+GPPGTGKT
Sbjct: 173 MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKT 232
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLAKA+A + F G++ ++ ++G V++LF A APSI+FIDEIDAIG+K
Sbjct: 233 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 292
Query: 414 RGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIV 473
R + GG E ++ +L++L ++DGF S V VI ATNR++ LDPAL+R GR D+ +
Sbjct: 293 RYDSN-SGGEREIQRTMLELLNQLDGFD-SRGDVKVIMATNRIETLDPALIRPGRIDRKI 350
Query: 474 RVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTA 533
LP + + I ++H R DV L E+ +D +GA+++ I EAG++
Sbjct: 351 EFPLPDEKTKKRIFQIHTS----RMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMAL 406
Query: 534 RKDLDYIGQEELLEA-----LKRQKGTFE 557
R+ + E+ ++ K+Q+GT E
Sbjct: 407 RERRMKVTNEDFKKSKENVLYKKQEGTPE 435
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 437 (158.9 bits), Expect = 2.3e-40, P = 2.3e-40
Identities = 100/269 (37%), Positives = 157/269 (58%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+ E+ T+ D G + +E++E V + L + E ++ GI PKGV+L+GPPGTGKT
Sbjct: 172 MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKT 231
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLAKA+A + F G++ ++ ++G V++LF A APSI+FIDEIDAIG+K
Sbjct: 232 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 291
Query: 414 RGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIV 473
R + GG E ++ +L++L ++DGF S V VI ATNR++ LDPAL+R GR D+ +
Sbjct: 292 RYDSN-SGGEREIQRTMLELLNQLDGFD-SRGDVKVIMATNRIETLDPALIRPGRIDRKI 349
Query: 474 RVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTA 533
LP + + I ++H R DV L E+ +D +GA+++ I EAG++
Sbjct: 350 EFPLPDEKTKKRIFQIHTS----RMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMAL 405
Query: 534 RKDLDYIGQEELLEA-----LKRQKGTFE 557
R+ + E+ ++ K+Q+GT E
Sbjct: 406 RERRMKVTNEDFKKSKENVLYKKQEGTPE 434
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 457 (165.9 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 103/271 (38%), Positives = 160/271 (59%)
Query: 281 RRALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCP 339
R ALG+ S + + E+ VT+DD G + IK EL+E V + + +++ G+
Sbjct: 463 RFALGNSNPSALRE-TVVESVNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPS 521
Query: 340 KGVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAP 399
KGVL +GPPGTGKTLLAKA+A E F + G + + M+ G + S ++D+F AR+ AP
Sbjct: 522 KGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAP 581
Query: 400 SIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDIL 459
+++F+DE+D+I RGG +G G ++ + Q+LTEMDG + V VIGATNR D +
Sbjct: 582 TVVFLDELDSIAKARGG-SLGDAGGASDRVVNQLLTEMDGMNAKKN-VFVIGATNRPDQI 639
Query: 460 DPALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGA 519
DPA+LR GR D+++ V LP ++ R +IL R ++ E + L IA+ T+ F+GA
Sbjct: 640 DPAILRPGRLDQLIYVPLPDENARLSILNAQLR----KTPLEPGLELTAIAKATQGFSGA 695
Query: 520 ELQNILNEAGILTARKDLDYIGQEELLEALK 550
+L I+ A + ++ Q E + +K
Sbjct: 696 DLLYIVQRAAKYAIKDSIEAHRQHEAEKEVK 726
Score = 432 (157.1 bits), Expect = 2.0e-37, P = 2.0e-37
Identities = 98/243 (40%), Positives = 146/243 (60%)
Query: 303 VTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAG 361
V +DD G +++E+V + L++ + F+ GI P+GVL++GPPGTGKTL+A+A+A
Sbjct: 211 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVAN 270
Query: 362 EAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGG 421
E G FF NG + + G + S ++ F A AP+IIFIDEID+I KR D
Sbjct: 271 ETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKR---DKTN 327
Query: 422 GGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKD 481
G ER + Q+LT MDG K + S V+VI ATNR + +DPAL R GRFD+ V +G+P
Sbjct: 328 GEVERRV-VSQLLTLMDGMK-ARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDAT 385
Query: 482 GRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIG 541
GR +L++H +N DV L+ +A T + GA++ ++ +EA + R+ +D I
Sbjct: 386 GRLEVLRIHTKNMKLAD----DVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLID 441
Query: 542 QEE 544
+E
Sbjct: 442 LDE 444
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 435 (158.2 bits), Expect = 3.8e-40, P = 3.8e-40
Identities = 97/259 (37%), Positives = 153/259 (59%)
Query: 296 SAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTL 354
S T V ++ G R+++E+V + + N ++ GI PKGVLL+GPPGTGKTL
Sbjct: 127 SENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTL 186
Query: 355 LAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKR 414
LA+A+A F + V+ ++G +A ++++F A+ P IIF+DEIDAIG +R
Sbjct: 187 LARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRR 246
Query: 415 GGPDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
G A+RE + L+++L +DGF+ V +I ATNR D+LDPAL+R GR D+
Sbjct: 247 FSQ---GTSADREIQRTLMELLNHLDGFE-ELGNVKIIMATNRPDVLDPALVRPGRLDRK 302
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
+ + LP++ R ILK+HA NK + D+ + + L + F GA+L+N+ EAG+
Sbjct: 303 IEIPLPNETARIEILKIHA-NKMTKLG---DIDYESVCRLCDGFNGADLRNVCTEAGMFA 358
Query: 533 ARKDLDYIGQEELLEALKR 551
R DY+ +E+ +A ++
Sbjct: 359 IRAMRDYVIEEDFYKAARK 377
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 435 (158.2 bits), Expect = 3.8e-40, P = 3.8e-40
Identities = 97/259 (37%), Positives = 153/259 (59%)
Query: 296 SAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTL 354
S T V ++ G R+++E+V + + N ++ GI PKGVLL+GPPGTGKTL
Sbjct: 127 SENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTL 186
Query: 355 LAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKR 414
LA+A+A F + V+ ++G +A ++++F A+ P IIF+DEIDAIG +R
Sbjct: 187 LARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRR 246
Query: 415 GGPDIGGGGAERE--QGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
G A+RE + L+++L +DGF+ V +I ATNR D+LDPAL+R GR D+
Sbjct: 247 FSQ---GTSADREIQRTLMELLNHLDGFE-ELGNVKIIMATNRPDVLDPALVRPGRLDRK 302
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
+ + LP++ R ILK+HA NK + D+ + + L + F GA+L+N+ EAG+
Sbjct: 303 IEIPLPNETARIEILKIHA-NKMTKLG---DIDYESVCRLCDGFNGADLRNVCTEAGMFA 358
Query: 533 ARKDLDYIGQEELLEALKR 551
R DY+ +E+ +A ++
Sbjct: 359 IRAMRDYVIEEDFYKAARK 377
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 456 (165.6 bits), Expect = 4.0e-40, P = 4.0e-40
Identities = 109/290 (37%), Positives = 162/290 (55%)
Query: 281 RRALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCP 339
R ALG S + ++ E V ++D G E +KREL E V+ + + E+FQ G+
Sbjct: 474 RYALGVSNPSALREVAVVEVPNVRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPS 533
Query: 340 KGVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAP 399
+GVL +GPPGTGKT+LAKA+A E F + G + + M+ G + S ++D+F AR+ AP
Sbjct: 534 RGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAP 593
Query: 400 SIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDIL 459
++F+DE+D+I RGG +G G ++ + Q+LTEMDG S V VIGATNR + L
Sbjct: 594 CVVFLDELDSIAKSRGG-SVGDAGGASDRVVNQLLTEMDGM-TSKKNVFVIGATNRPEQL 651
Query: 460 DPALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGA 519
D AL+R GR D +V V LP + R ILK R ++ DV ++ IA T F+GA
Sbjct: 652 DAALVRPGRLDTLVYVPLPDQASREGILKAQLR----KTPVASDVDIEFIASKTHGFSGA 707
Query: 520 ELQNILNEAGILTARKDLDY-IGQEELLEALKRQKGTFETGQEDSTDIPE 568
+L + A L ++ + I +++ EA E +E +PE
Sbjct: 708 DLGFVTQRAVKLAIKESISAEIERQKQREAAGEDV-KMEDEEEGEDPVPE 756
Score = 426 (155.0 bits), Expect = 8.9e-37, P = 8.9e-37
Identities = 96/243 (39%), Positives = 147/243 (60%)
Query: 303 VTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAG 361
V +DD G +++E+V + L++ + F++ GI P+G+L++GPPGTGKTL+A+A+A
Sbjct: 222 VGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 281
Query: 362 EAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGG 421
E G FF NG + + G + S ++ F A +P+IIFIDEID+I KR +
Sbjct: 282 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR---EKTN 338
Query: 422 GGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKD 481
G ER + Q+LT MDG K + S V+V+ ATNR + +DPAL R GRFD+ V +G+P
Sbjct: 339 GEVERRV-VSQLLTLMDGMK-ARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPT 396
Query: 482 GRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIG 541
GR IL +H +N +DV L+ IA T + G++L ++ +EA + R+ +D I
Sbjct: 397 GRLEILSIHTKNMKLG----EDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLID 452
Query: 542 QEE 544
+E
Sbjct: 453 LDE 455
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 434 (157.8 bits), Expect = 4.9e-40, P = 4.9e-40
Identities = 99/269 (36%), Positives = 157/269 (58%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+ E+ T+ D G + +E++E V + L + E ++ GI PKGV+L+GPPGTGKT
Sbjct: 174 MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKT 233
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLAKA+A + F G++ ++ ++G V++LF A APSI+FIDEIDAIG+K
Sbjct: 234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
Query: 414 RGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIV 473
R + GG E ++ +L++L ++DGF S V VI ATNR++ LDPAL+R GR D+ +
Sbjct: 294 RYDSN-SGGEREIQRTMLELLNQLDGFD-SRGDVKVIMATNRIETLDPALIRPGRIDRKI 351
Query: 474 RVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTA 533
LP + + I ++H R DV L ++ +D +GA+++ I EAG++
Sbjct: 352 EFPLPDEKTKKRIFQIHTS----RMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMAL 407
Query: 534 RKDLDYIGQEELLEA-----LKRQKGTFE 557
R+ + E+ ++ K+Q+GT E
Sbjct: 408 RERRMKVTNEDFKKSKENVLYKKQEGTPE 436
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 434 (157.8 bits), Expect = 4.9e-40, P = 4.9e-40
Identities = 99/269 (36%), Positives = 157/269 (58%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+ E+ T+ D G + +E++E V + L + E ++ GI PKGV+L+GPPGTGKT
Sbjct: 174 MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKT 233
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLAKA+A + F G++ ++ ++G V++LF A APSI+FIDEIDAIG+K
Sbjct: 234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
Query: 414 RGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIV 473
R + GG E ++ +L++L ++DGF S V VI ATNR++ LDPAL+R GR D+ +
Sbjct: 294 RYDSN-SGGEREIQRTMLELLNQLDGFD-SRGDVKVIMATNRIETLDPALIRPGRIDRKI 351
Query: 474 RVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTA 533
LP + + I ++H R DV L ++ +D +GA+++ I EAG++
Sbjct: 352 EFPLPDEKTKKRIFQIHTS----RMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMAL 407
Query: 534 RKDLDYIGQEELLEA-----LKRQKGTFE 557
R+ + E+ ++ K+Q+GT E
Sbjct: 408 RERRMKVTNEDFKKSKENVLYKKQEGTPE 436
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 434 (157.8 bits), Expect = 4.9e-40, P = 4.9e-40
Identities = 99/269 (36%), Positives = 157/269 (58%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+ E+ T+ D G + +E++E V + L + E ++ GI PKGV+L+GPPGTGKT
Sbjct: 101 MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKT 160
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLAKA+A + F G++ ++ ++G V++LF A APSI+FIDEIDAIG+K
Sbjct: 161 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 220
Query: 414 RGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIV 473
R + GG E ++ +L++L ++DGF S V VI ATNR++ LDPAL+R GR D+ +
Sbjct: 221 RYDSN-SGGEREIQRTMLELLNQLDGFD-SRGDVKVIMATNRIETLDPALIRPGRIDRKI 278
Query: 474 RVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTA 533
LP + + I ++H R DV L ++ +D +GA+++ I EAG++
Sbjct: 279 EFPLPDEKTKKRIFQIHTS----RMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMAL 334
Query: 534 RKDLDYIGQEELLEA-----LKRQKGTFE 557
R+ + E+ ++ K+Q+GT E
Sbjct: 335 RERRMKVTNEDFKKSKENVLYKKQEGTPE 363
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 434 (157.8 bits), Expect = 4.9e-40, P = 4.9e-40
Identities = 99/269 (36%), Positives = 157/269 (58%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+ E+ T+ D G + +E++E V + L + E ++ GI PKGV+L+GPPGTGKT
Sbjct: 174 MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKT 233
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLAKA+A + F G++ ++ ++G V++LF A APSI+FIDEIDAIG+K
Sbjct: 234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
Query: 414 RGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIV 473
R + GG E ++ +L++L ++DGF S V VI ATNR++ LDPAL+R GR D+ +
Sbjct: 294 RYDSN-SGGEREIQRTMLELLNQLDGFD-SRGDVKVIMATNRIETLDPALIRPGRIDRKI 351
Query: 474 RVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTA 533
LP + + I ++H R DV L ++ +D +GA+++ I EAG++
Sbjct: 352 EFPLPDEKTKKRIFQIHTS----RMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMAL 407
Query: 534 RKDLDYIGQEELLEA-----LKRQKGTFE 557
R+ + E+ ++ K+Q+GT E
Sbjct: 408 RERRMKVTNEDFKKSKENVLYKKQEGTPE 436
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 434 (157.8 bits), Expect = 4.9e-40, P = 4.9e-40
Identities = 99/269 (36%), Positives = 157/269 (58%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+ E+ T+ D G + +E++E V + L + E ++ GI PKGV+L+GPPGTGKT
Sbjct: 174 MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKT 233
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLAKA+A + F G++ ++ ++G V++LF A APSI+FIDEIDAIG+K
Sbjct: 234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
Query: 414 RGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIV 473
R + GG E ++ +L++L ++DGF S V VI ATNR++ LDPAL+R GR D+ +
Sbjct: 294 RYDSN-SGGEREIQRTMLELLNQLDGFD-SRGDVKVIMATNRIETLDPALIRPGRIDRKI 351
Query: 474 RVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTA 533
LP + + I ++H R DV L ++ +D +GA+++ I EAG++
Sbjct: 352 EFPLPDEKTKKRIFQIHTS----RMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMAL 407
Query: 534 RKDLDYIGQEELLEA-----LKRQKGTFE 557
R+ + E+ ++ K+Q+GT E
Sbjct: 408 RERRMKVTNEDFKKSKENVLYKKQEGTPE 436
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 434 (157.8 bits), Expect = 4.9e-40, P = 4.9e-40
Identities = 99/269 (36%), Positives = 157/269 (58%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+ E+ T+ D G + +E++E V + L + E ++ GI PKGV+L+GPPGTGKT
Sbjct: 174 MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKT 233
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLAKA+A + F G++ ++ ++G V++LF A APSI+FIDEIDAIG+K
Sbjct: 234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
Query: 414 RGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIV 473
R + GG E ++ +L++L ++DGF S V VI ATNR++ LDPAL+R GR D+ +
Sbjct: 294 RYDSN-SGGEREIQRTMLELLNQLDGFD-SRGDVKVIMATNRIETLDPALIRPGRIDRKI 351
Query: 474 RVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTA 533
LP + + I ++H R DV L ++ +D +GA+++ I EAG++
Sbjct: 352 EFPLPDEKTKKRIFQIHTS----RMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMAL 407
Query: 534 RKDLDYIGQEELLEA-----LKRQKGTFE 557
R+ + E+ ++ K+Q+GT E
Sbjct: 408 RERRMKVTNEDFKKSKENVLYKKQEGTPE 436
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 434 (157.8 bits), Expect = 4.9e-40, P = 4.9e-40
Identities = 99/269 (36%), Positives = 157/269 (58%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+ E+ T+ D G + +E++E V + L + E ++ GI PKGV+L+GPPGTGKT
Sbjct: 174 MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKT 233
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLAKA+A + F G++ ++ ++G V++LF A APSI+FIDEIDAIG+K
Sbjct: 234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
Query: 414 RGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIV 473
R + GG E ++ +L++L ++DGF S V VI ATNR++ LDPAL+R GR D+ +
Sbjct: 294 RYDSN-SGGEREIQRTMLELLNQLDGFD-SRGDVKVIMATNRIETLDPALIRPGRIDRKI 351
Query: 474 RVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTA 533
LP + + I ++H R DV L ++ +D +GA+++ I EAG++
Sbjct: 352 EFPLPDEKTKKRIFQIHTS----RMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMAL 407
Query: 534 RKDLDYIGQEELLEA-----LKRQKGTFE 557
R+ + E+ ++ K+Q+GT E
Sbjct: 408 RERRMKVTNEDFKKSKENVLYKKQEGTPE 436
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 432 (157.1 bits), Expect = 8.1e-40, P = 8.1e-40
Identities = 105/270 (38%), Positives = 160/270 (59%)
Query: 304 TFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGE 362
++ D G E +E++E V + L + E +++ GI PKGV+L+GPPGTGKTLLAKA+A E
Sbjct: 191 SYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANE 250
Query: 363 AGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGG 422
F G++ ++ ++G V+++F A APSI+FIDEIDA+G+KR GG
Sbjct: 251 TSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEAT-SGG 309
Query: 423 GAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKDG 482
E ++ +L++L ++DGF S V VI ATNR+D LDPAL+R GR D+ +++ P
Sbjct: 310 EREIQRTMLELLNQLDGFD-SRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKT 368
Query: 483 RFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIGQ 542
+ I ++H +K S DV L+E ++ +GA+++ I EAG+L R+ I Q
Sbjct: 369 KRRIFQIHT-SKMTMSP---DVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQ 424
Query: 543 EELLEALKRQKGTFETGQEDSTDIPEELKL 572
+L +A R K F+ +IPE L L
Sbjct: 425 ADLRKA--RDKALFQK----KGNIPEGLYL 448
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 432 (157.1 bits), Expect = 8.1e-40, P = 8.1e-40
Identities = 105/270 (38%), Positives = 160/270 (59%)
Query: 304 TFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGE 362
++ D G E +E++E V + L + E +++ GI PKGV+L+GPPGTGKTLLAKA+A E
Sbjct: 191 SYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANE 250
Query: 363 AGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGG 422
F G++ ++ ++G V+++F A APSI+FIDEIDA+G+KR GG
Sbjct: 251 TSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEAT-SGG 309
Query: 423 GAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKDG 482
E ++ +L++L ++DGF S V VI ATNR+D LDPAL+R GR D+ +++ P
Sbjct: 310 EREIQRTMLELLNQLDGFD-SRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKT 368
Query: 483 RFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIGQ 542
+ I ++H +K S DV L+E ++ +GA+++ I EAG+L R+ I Q
Sbjct: 369 KRRIFQIHT-SKMTMSP---DVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQ 424
Query: 543 EELLEALKRQKGTFETGQEDSTDIPEELKL 572
+L +A R K F+ +IPE L L
Sbjct: 425 ADLRKA--RDKALFQK----KGNIPEGLYL 448
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 431 (156.8 bits), Expect = 1.0e-39, P = 1.0e-39
Identities = 102/276 (36%), Positives = 157/276 (56%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ T+ D G + +E++E V + L + E ++ GI PKGV+L+GPPGTGKTLLA
Sbjct: 177 EKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 236
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
KA+A + F G++ ++ ++G V++LF A PSI+FIDEIDAIG+KR
Sbjct: 237 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYD 296
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
+ GG E ++ +L++L ++DGF S V VI ATNR++ LDPAL+R GR D+ +
Sbjct: 297 SN-SGGEREIQRTMLELLNQLDGFD-SRGDVKVIMATNRIETLDPALIRPGRIDRKIEFP 354
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
LP + + I ++H R DV L E+ +D +GA+++ I EAG++ R+
Sbjct: 355 LPDEKTKKRIFQIHTS----RMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRER 410
Query: 537 LDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKL 572
+ E+ K+ K F + + T PE L L
Sbjct: 411 RMKVTNEDF----KKSKENFLYKKTEGT--PEGLYL 440
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 453 (164.5 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 106/280 (37%), Positives = 161/280 (57%)
Query: 299 ETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAK 357
E V + D GQE+IK++L+E + LK + F GI PKG+LL+GPPG KTLLAK
Sbjct: 615 EIPKVFWGDIGGQEHIKQKLKEAIEWPLKYPQSFIRMGIKPPKGILLYGPPGCSKTLLAK 674
Query: 358 AIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGP 417
A+A E+G+ F A G + + +VG + V+D+F AR +PSI+F DEID + R G
Sbjct: 675 ALATESGLNFIAVKGPELLSKWVGESERAVRDIFKKARQNSPSILFFDEIDGLAISRSGE 734
Query: 418 DIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGL 477
G G ER + Q+LTEMDG + T+ V +IGATNR DI+D A+LR GR D+I+ +
Sbjct: 735 --GSGAVERV--VSQLLTEMDGIQPLTN-VTIIGATNRPDIIDKAILRAGRIDRILYISP 789
Query: 478 PSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDL 537
P D R I +H + + D+ + +++ LT+ ++GAE+ +I EA I ++D+
Sbjct: 790 PDLDARKEIFNIHLK----KVPHSSDIDINQLSILTDGYSGAEVTSICREASIAAMKEDI 845
Query: 538 DY--IGQEELLEALKR-QKGTFETGQEDSTDIPEELKLRL 574
+ I + A+ +KG + + D E L++
Sbjct: 846 NAKEINMSHFISAIGNVKKGITQEMLDFYKDYQENSNLQV 885
Score = 328 (120.5 bits), Expect = 6.2e-26, P = 6.2e-26
Identities = 97/309 (31%), Positives = 161/309 (52%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI--LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
I + + F G + ++++E++ + K D ++ G+ PKG+LL+GPPGTGK
Sbjct: 301 IDNNKNINLNFQSIGGLDLQVKQIRELIDLSFYKLDL-LKSFGVKPPKGILLYGPPGTGK 359
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TLLA+ +A + F NG D ++ F G+ ++ +F A +PSIIFIDE+DA+
Sbjct: 360 TLLARIVATQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCP 419
Query: 413 KRGGPDIGGGGAEREQGLL-QILTEMDGFKVSTS--------------------QVLVIG 451
KR D +E E+ ++ +LT MDG VSTS +V+VIG
Sbjct: 420 KR--ED---NSSEVEKRIVGSLLTLMDGV-VSTSDQNDGGGGDNGNGNGNCGGDKVIVIG 473
Query: 452 ATNRLDILDPALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAE 511
TNR D +D AL R GRFD + + +P++ GR IL + F S+ + QEIA
Sbjct: 474 CTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNI------FLSKIPNQLTSQEIAM 527
Query: 512 L---TEDFTGAELQNILNEAGILTARKDLDYIGQEELLEAL---KRQKGTFETGQEDSTD 565
+ T F GA+++++ EA + + + ++L +++ K +KG E +E+ +
Sbjct: 528 IASKTHGFVGADIESLCKEASLKCFNRIKNE--NQKLFQSINIEKEEKGKEEKQEENLQN 585
Query: 566 IPEELKLRL 574
+ +KL +
Sbjct: 586 LLSLIKLSM 594
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 430 (156.4 bits), Expect = 1.3e-39, P = 1.3e-39
Identities = 97/258 (37%), Positives = 150/258 (58%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
++ EE +T++D G + +L+E+V + L E F GI PKGVLL+GPPGTGKT
Sbjct: 151 MTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKT 210
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
L A+AIA F G++ V+ +VG A V++LF A+S I+FIDE+DAIG
Sbjct: 211 LTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGS 270
Query: 414 RGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIV 473
RG + G E ++ +L+I+ ++DGF + + V+ ATNR D LD AL+R GR D+ +
Sbjct: 271 RGD-ESAHGDHEVQRTMLEIVNQLDGFD-NRGNIKVLMATNRPDTLDSALVRPGRIDRRI 328
Query: 474 RVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTA 533
LP +GR I K+HA +DV + +A L + TG++++++ EAG+
Sbjct: 329 EFSLPDLEGRTHIFKIHANTMNM----SRDVRFELLARLCPNSTGSDIRSVCTEAGMFAI 384
Query: 534 RKDLDYIGQEELLEALKR 551
R I +++LL A+ +
Sbjct: 385 RARRKTITEKDLLLAINK 402
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 430 (156.4 bits), Expect = 1.3e-39, P = 1.3e-39
Identities = 97/258 (37%), Positives = 150/258 (58%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
++ EE +T++D G + +L+E+V + L E F GI PKGVLL+GPPGTGKT
Sbjct: 151 MTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKT 210
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
L A+AIA F G++ V+ +VG A V++LF A+S I+FIDE+DAIG
Sbjct: 211 LTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGS 270
Query: 414 RGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIV 473
RG + G E ++ +L+I+ ++DGF + + V+ ATNR D LD AL+R GR D+ +
Sbjct: 271 RGD-ESAHGDHEVQRTMLEIVNQLDGFD-NRGNIKVLMATNRPDTLDSALVRPGRIDRRI 328
Query: 474 RVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTA 533
LP +GR I K+HA +DV + +A L + TG++++++ EAG+
Sbjct: 329 EFSLPDLEGRTHIFKIHANTMNM----SRDVRFELLARLCPNSTGSDIRSVCTEAGMFAI 384
Query: 534 RKDLDYIGQEELLEALKR 551
R I +++LL A+ +
Sbjct: 385 RARRKTITEKDLLLAINK 402
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 451 (163.8 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 107/288 (37%), Positives = 166/288 (57%)
Query: 286 SLGKSRAKFI--SAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGV 342
++GKS + + ET T+ D G + +KRELQE+V+ +++ E++ G+ +GV
Sbjct: 460 AMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGV 519
Query: 343 LLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSII 402
L +GPPG GKTLLAKAIA E F + G + + M+ G + + V+D+F AR+ AP ++
Sbjct: 520 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVL 579
Query: 403 FIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPA 462
F DE+D+I RGG +G G ++ + Q+LTEMDG + V +IGATNR DI+DPA
Sbjct: 580 FFDELDSIAKARGG-SVGDAGGAADRVINQVLTEMDGMNAKKN-VFIIGATNRPDIIDPA 637
Query: 463 LLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQ 522
+LR GR D+++ + LP + R I K R ++ D+ L +A+ T F+GA+L
Sbjct: 638 VLRPGRLDQLIYIPLPDEASRLQIFKASLR----KTPLSADLDLNFLAKNTVGFSGADLT 693
Query: 523 NILNEAGILTARKDLDY-IGQEELLEALKRQKGTFETGQEDSTD-IPE 568
I A L R+ ++ I QE+ E R E +++ D +PE
Sbjct: 694 EICQRACKLAIRESIEREIRQEK--ERQDRSARGEELMEDELADPVPE 739
Score = 409 (149.0 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 94/248 (37%), Positives = 146/248 (58%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E V +DD G +++E+V + L++ + F+ G+ P+G+LL GPPGTGKTL+A
Sbjct: 201 EALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIA 260
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A E G FF NG + + G + S ++ FA +P+I+FIDEIDAI KR
Sbjct: 261 RAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKR-- 318
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
+ G E+ + Q+LT MDG K + + V+VI ATNR + +D AL R GRFD+ + +G
Sbjct: 319 -EKAHGEVEKRI-VSQLLTLMDGLK-TRAHVVVIAATNRPNSIDGALRRFGRFDREIDIG 375
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
+P GR IL++H +N +DV L+++A F GA+L ++ +EA I R+
Sbjct: 376 IPDAVGRLEILRIHTKNMKLG----EDVDLEQVANECHGFVGADLASLCSEAAIQQIREK 431
Query: 537 LDYIGQEE 544
++ I E+
Sbjct: 432 MELIDLED 439
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 451 (163.8 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 107/288 (37%), Positives = 166/288 (57%)
Query: 286 SLGKSRAKFI--SAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGV 342
++GKS + + ET T+ D G + +KRELQE+V+ +++ E++ G+ +GV
Sbjct: 460 AMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGV 519
Query: 343 LLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSII 402
L +GPPG GKTLLAKAIA E F + G + + M+ G + + V+D+F AR+ AP ++
Sbjct: 520 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVL 579
Query: 403 FIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPA 462
F DE+D+I RGG +G G ++ + Q+LTEMDG + V +IGATNR DI+DPA
Sbjct: 580 FFDELDSIAKARGG-SVGDAGGAADRVINQVLTEMDGMNAKKN-VFIIGATNRPDIIDPA 637
Query: 463 LLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQ 522
+LR GR D+++ + LP + R I K R ++ D+ L +A+ T F+GA+L
Sbjct: 638 VLRPGRLDQLIYIPLPDEASRLQIFKASLR----KTPLSADLDLNFLAKNTVGFSGADLT 693
Query: 523 NILNEAGILTARKDLDY-IGQEELLEALKRQKGTFETGQEDSTD-IPE 568
I A L R+ ++ I QE+ E R E +++ D +PE
Sbjct: 694 EICQRACKLAIRESIEREIRQEK--ERQDRSARGEELMEDELADPVPE 739
Score = 409 (149.0 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 94/248 (37%), Positives = 146/248 (58%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E V +DD G +++E+V + L++ + F+ G+ P+G+LL GPPGTGKTL+A
Sbjct: 201 EALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIA 260
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
+A+A E G FF NG + + G + S ++ FA +P+I+FIDEIDAI KR
Sbjct: 261 RAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKR-- 318
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
+ G E+ + Q+LT MDG K + + V+VI ATNR + +D AL R GRFD+ + +G
Sbjct: 319 -EKAHGEVEKRI-VSQLLTLMDGLK-TRAHVVVIAATNRPNSIDGALRRFGRFDREIDIG 375
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
+P GR IL++H +N +DV L+++A F GA+L ++ +EA I R+
Sbjct: 376 IPDAVGRLEILRIHTKNMKLG----EDVDLEQVANECHGFVGADLASLCSEAAIQQIREK 431
Query: 537 LDYIGQEE 544
++ I E+
Sbjct: 432 MELIDLED 439
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 429 (156.1 bits), Expect = 1.7e-39, P = 1.7e-39
Identities = 98/259 (37%), Positives = 154/259 (59%)
Query: 295 ISAEETTGVTFDDFAG-QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGK 352
++ EE VT+ D G ++ I++ L+E+V + L + E F GI PKG+LL+GPPGTGK
Sbjct: 198 MTVEEKPDVTYSDVGGCKDQIEK-LREVVELPLLSPERFATLGIDPPKGILLYGPPGTGK 256
Query: 353 TLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGS 412
TL A+A+A F G++ V+ +VG A V++LF AR+ IIF DEIDA+G
Sbjct: 257 TLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGG 316
Query: 413 KRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKI 472
R D GG E ++ +L+++T++DGF + V+ ATNR + LDPALLR GR D+
Sbjct: 317 ARFD-DGAGGDNEVQRTMLELITQLDGFD-PRGNIKVMFATNRPNTLDPALLRPGRIDRK 374
Query: 473 VRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILT 532
V LP +GR I ++H+++ E+ + + I+ L + TGAEL+++ EAG+
Sbjct: 375 VEFSLPDLEGRANIFRIHSKSM----SVERGIRWELISRLCPNSTGAELRSVCTEAGMFA 430
Query: 533 ARKDLDYIGQEELLEALKR 551
R +++ L+A+ +
Sbjct: 431 IRARRKVATEKDFLKAVDK 449
>TIGR_CMR|CPS_1798 [details] [associations]
symbol:CPS_1798 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 RefSeq:YP_268529.1 ProteinModelPortal:Q484I6
STRING:Q484I6 GeneID:3520574 KEGG:cps:CPS_1798 PATRIC:21466749
HOGENOM:HOG000133952 ProtClustDB:CLSK741075
BioCyc:CPSY167879:GI48-1868-MONOMER Uniprot:Q484I6
Length = 1284
Score = 465 (168.7 bits), Expect = 1.8e-39, Sum P(2) = 1.8e-39
Identities = 149/452 (32%), Positives = 230/452 (50%)
Query: 304 TFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGEA 363
+ DD G E KR L E+V LK E+ N GI P G L GPPGTGKTLLAKA+AGE
Sbjct: 849 SLDDVIGLERAKRRLIEVVSWLKAPEKLLNFGIKIPTGFLFSGPPGTGKTLLAKAVAGEC 908
Query: 364 GVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGGG 423
+PFF+ ++ G +K LFA+AR +APSIIFIDEIDAI ++R D G
Sbjct: 909 ELPFFSVAASELSTPHSGGTTENIKQLFATARKYAPSIIFIDEIDAIAAQR--TD-NSDG 965
Query: 424 AEREQGLL--QILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSKD 481
+ R++ L +LTEMDGF ++ V V+ ATN +LD A+ R GRFD+ + LP+K+
Sbjct: 966 SSRDKNLTVNALLTEMDGFSIAEVPVFVMAATNHPQLLDSAITRPGRFDETIYCDLPNKN 1025
Query: 482 GRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKDLDYIG 541
R K A +K+ + +E + LQ++ + + AE+ +L E+ I A + +
Sbjct: 1026 ARLIFFKRFA-SKHKLNWQETE--LQQLVSSAQGMSSAEIDQVLRES-IYQAVGENQQLT 1081
Query: 542 QEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLACHLPDPYRPIIETDIK 601
E + + + R D + E K R AY EAA +LA L P +PI D
Sbjct: 1082 TEHIKQTMIR---IVYGAPSDHIFLGAEEKRRTAYHEAA-HLLAYKLLFPKQPI---DFI 1134
Query: 602 SIRSQPNMRYAEISGRVFSRKNDY-----LNAIVRACAPRVIEEQMFGIDNMCW-ISSKA 655
+I + N ++ R Y ++ + A RV E+ G D C +S+ A
Sbjct: 1135 TIEPR-NQALGFVATRASEEYESYSKRRVMHKLQVLLAGRVAEKLCTG-D--CEEVSTGA 1190
Query: 656 TLD---ASRLAEFLILQTGMT-AFGKAYYR-----NQSDLVPNLATKLEALRDEYMRFAV 706
+ D A++LA I + G+ G +SDL LA +A++ +++ +
Sbjct: 1191 SNDIEKATQLAMHAIYEGGIEPTVGPVNIAMLTKFEESDL---LANAQQAVK-QWLDQSE 1246
Query: 707 EKCASVLREYHSAVETITDILLEKGEIKAEEI 738
++ +L++++ + + + LL+K + EEI
Sbjct: 1247 QQVEQLLKDHYQQLTLVAETLLDKESLLGEEI 1278
Score = 39 (18.8 bits), Expect = 1.8e-39, Sum P(2) = 1.8e-39
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1 MQSHFSQQLNSITFPKHFPSHFSRFN 26
++ HF +L+ TF FP+ R N
Sbjct: 762 VREHF--ELDLATFSLSFPAMLKRIN 785
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 428 (155.7 bits), Expect = 2.2e-39, P = 2.2e-39
Identities = 101/276 (36%), Positives = 159/276 (57%)
Query: 298 EETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 356
E+ T+ D G + +E++E V + L + E ++ GI PKGV+L+GPPGTGKTLLA
Sbjct: 176 EKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLA 235
Query: 357 KAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGG 416
KA+A + F G++ ++ ++G V++LF A APSI+FIDEIDA+G+KR
Sbjct: 236 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYD 295
Query: 417 PDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIVRVG 476
+ GG E ++ +L++L ++DGF S V VI ATNR++ LDPAL+R GR D+ +
Sbjct: 296 SN-SGGEREIQRTMLELLNQLDGFD-SRGDVKVIMATNRIETLDPALIRPGRIDRKIEFP 353
Query: 477 LPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARKD 536
LP + + I +H R +DV L E+ +D +GA+++ I EAG++ R+
Sbjct: 354 LPDEKTKRRIFTIHTS----RMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRER 409
Query: 537 LDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKL 572
+ E+ K+ K + +++ T PE L L
Sbjct: 410 RMKVTNEDF----KKSKESVLYRKKEGT--PEGLYL 439
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 427 (155.4 bits), Expect = 2.8e-39, P = 2.8e-39
Identities = 98/269 (36%), Positives = 157/269 (58%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+ E+ T+ D G + +E++E V + L + E ++ GI PKGV+L+G PGTGKT
Sbjct: 174 MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKT 233
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLAKA+A + F G++ ++ ++G V++LF A APSI+FIDEIDAIG+K
Sbjct: 234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
Query: 414 RGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIV 473
R + GG E ++ +L++L ++DGF S V VI ATNR++ LDPAL+R GR D+ +
Sbjct: 294 RYDSN-SGGEREIQRTMLELLNQLDGFD-SRGDVKVIMATNRIETLDPALIRPGRIDRKI 351
Query: 474 RVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTA 533
LP + + I ++H R +DV L ++ +D +GA+++ I EAG++
Sbjct: 352 EFPLPDEKTKRRIFQIHTS----RMTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMAL 407
Query: 534 RKDLDYIGQEELLEA-----LKRQKGTFE 557
R+ + E+ ++ K+Q+GT E
Sbjct: 408 RERRMKVTNEDFKKSKENVLYKKQEGTPE 436
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 426 (155.0 bits), Expect = 3.6e-39, P = 3.6e-39
Identities = 110/274 (40%), Positives = 152/274 (55%)
Query: 290 SRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPP 348
S + E VT+ D G + K+E++E V + L + + ++ GI P+GVLL+GPP
Sbjct: 150 SSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPP 209
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKT+L KA+A F NG++FV+ ++G V+D+F AR +P+IIFIDEID
Sbjct: 210 GTGKTMLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEID 269
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
AI +KR G E ++ LL++L +MDGF+ TS V VI ATNR D LDPALLR GR
Sbjct: 270 AIATKRFDAQTGAD-REVQRILLELLNQMDGFE-QTSNVKVIMATNRADTLDPALLRPGR 327
Query: 469 FD-KIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNE 527
D KI L + R I A E + D L+ E +GA + I+ E
Sbjct: 328 LDRKIEFPSLRDRRERRLIFSTIASKMSLSPEVDLDSLIVR----NEPLSGAVIAAIMQE 383
Query: 528 AGILTARKDLDYIGQEELLEALKRQKGTFETGQE 561
AG+ RK+ I Q +L +A Q +TGQE
Sbjct: 384 AGLRAVRKNRYNIIQSDLEDAYSAQ---VKTGQE 414
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 426 (155.0 bits), Expect = 3.6e-39, P = 3.6e-39
Identities = 98/269 (36%), Positives = 156/269 (57%)
Query: 295 ISAEETTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKT 353
+ E+ T+ D G + +E++E V + L + E ++ GI PKGV+L+G PGTGKT
Sbjct: 174 MKVEKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKT 233
Query: 354 LLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSK 413
LLAKA+A + F G++ ++ ++G V++LF A APSI+FIDEIDAIG+K
Sbjct: 234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
Query: 414 RGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIV 473
R + GG E ++ +L++L ++DGF S V VI ATNR++ LDPAL+R GR D+ +
Sbjct: 294 RYDSN-SGGEREIQRTMLELLNQLDGFD-SRGDVKVIMATNRIETLDPALIRPGRIDRKI 351
Query: 474 RVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTA 533
LP + + I ++H R DV L ++ +D +GA+++ I EAG++
Sbjct: 352 EFPLPDEKTKRRIFQIHTS----RMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMAL 407
Query: 534 RKDLDYIGQEELLEA-----LKRQKGTFE 557
R+ + E+ ++ K+Q+GT E
Sbjct: 408 RERRMKVTNEDFKKSKENVLYKKQEGTPE 436
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 446 (162.1 bits), Expect = 8.3e-39, P = 8.3e-39
Identities = 117/300 (39%), Positives = 163/300 (54%)
Query: 291 RAKFISAEETTGVTFDDFAGQEYIKRELQ-EIVRILKNDEEFQNKGIYCPKGVLLHGPPG 349
R FI+ +TT +DD E I+ EL+ ++ +K E + G+ P GVLL GPPG
Sbjct: 650 REGFITVPDTT---WDDIGALEKIREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPG 706
Query: 350 TGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDA 409
GKTLLAKAIA EAG+ F + G + + M+VG + V+ F AR+ AP +IF DE D+
Sbjct: 707 CGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDS 766
Query: 410 IGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRF 469
+ KR D G G + + Q+LTEMDG + V ++ ATNR DI+DPA+LR GR
Sbjct: 767 LCPKRS--DGGDGNNSGTRIVNQLLTEMDGVE-ERKGVYILAATNRPDIIDPAILRPGRL 823
Query: 470 DKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAG 529
D I+ VG P + R ILK +N R DV L EIA TE +TGA+L ++ +A
Sbjct: 824 DTILYVGFPEQSERTEILKATTKNGK-RPVLADDVDLDEIAAQTEGYTGADLAGLVKQAS 882
Query: 530 ILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEEL-----KLRLAYREAAVAVL 584
+ + R+ L+ G L + R + E Q+ + E+ KLRL Y V L
Sbjct: 883 MFSLRQSLNN-GDTNLDDLCVRSQHFQEALQQLRPSVNEQDRKIYDKLRLKYAAPRVPTL 941
Score = 338 (124.0 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 78/235 (33%), Positives = 132/235 (56%)
Query: 304 TFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGEA 363
+F D G + +EL E++ +K+ E + G+ +G+LLHGPPG GKT LA+AI+G+
Sbjct: 249 SFRDIGGMDSTLKELCEMLIHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQL 308
Query: 364 GVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGGG 423
+P T+ + G + R++++F A ++P ++FIDEIDAIG R
Sbjct: 309 KMPLMEIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNRQW-----AS 363
Query: 424 AEREQGLL-QILTEMDGFKVST--SQVLVIGATNRLDILDPALLRKGRFDKIVRVGLPSK 480
+ E+ ++ Q+++ +D K + V+VI AT R D+LDP L R GRFD + + +PS+
Sbjct: 364 KDMERRIVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPSR 423
Query: 481 DGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGILTARK 535
R IL++ S + K + +IAELT + GA+L +++ A + ++
Sbjct: 424 KERREILRIQCEGL---SVDPK-LNYDKIAELTPGYVGADLMALVSRAASVAVKR 474
>FB|FBgn0035443 [details] [associations]
symbol:CG12010 species:7227 "Drosophila melanogaster"
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
UniGene:Dm.11249 GeneID:38421 KEGG:dme:Dmel_CG12010
FlyBase:FBgn0035443 GenomeRNAi:38421 NextBio:808578
RefSeq:NP_647812.1 ProteinModelPortal:Q9VZQ0 SMR:Q9VZQ0
IntAct:Q9VZQ0 MINT:MINT-874256 STRING:Q9VZQ0 PRIDE:Q9VZQ0
UCSC:CG12010-RA InParanoid:Q9VZQ0 OMA:GCAKTTI PhylomeDB:Q9VZQ0
ArrayExpress:Q9VZQ0 Bgee:Q9VZQ0 Uniprot:Q9VZQ0
Length = 736
Score = 442 (160.7 bits), Expect = 9.0e-39, P = 9.0e-39
Identities = 105/278 (37%), Positives = 159/278 (57%)
Query: 290 SRAKFISAEETTGVTFDDFAGQEYIKRELQ-EIVRILKNDEEFQNKGIYCPKGVLLHGPP 348
SR+ + + T F+ G E +KR LQ ++ ++ F G+ PKGVLL+GPP
Sbjct: 454 SRSTDVRVSKMTA-GFEVIGGMEALKRTLQVSVLAGIRQSAAFARFGLSLPKGVLLYGPP 512
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
G KT +AK +A EA + F A + + +VG A + +F +AR AP +IF+DEID
Sbjct: 513 GCAKTTVAKCLAKEADMTFIATSAAEVYSPYVGCAERFISRIFDTARKNAPCLIFLDEID 572
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQ--VLVIGATNRLDILDPALLRK 466
++ +R GGGG + + L +LTEM+G SQ +LV+ ATNR D++D ALLR
Sbjct: 573 SLVGRRTVSSGGGGGQVQLRILSTLLTEMNGIVGGGSQQHILVVAATNRPDMIDDALLRP 632
Query: 467 GRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILN 526
GRFDK++ V P + R A+LK+H++ F ++V LQEIA T+ ++GA+L N+ N
Sbjct: 633 GRFDKLIHVPAPDEKSRLALLKLHSQRMPFH----ENVFLQEIAARTDRYSGADLCNLCN 688
Query: 527 EAGILTARKDLDY--IGQEELLEALKRQKGTFETGQED 562
EA I ++D I ++ + L +QK + Q D
Sbjct: 689 EAAIEAFQRDFKATEIELQDFEKVLTKQKSSLTQSQID 726
WARNING: HSPs involving 522 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 845 806 0.00098 121 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 772
No. of states in DFA: 625 (66 KB)
Total size of DFA: 393 KB (2192 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 74.70u 0.10s 74.80t Elapsed: 00:00:04
Total cpu time: 74.76u 0.10s 74.86t Elapsed: 00:00:04
Start: Tue May 21 03:26:41 2013 End: Tue May 21 03:26:45 2013
WARNINGS ISSUED: 2