BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043051
(845 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O19922|FTSH_CYACA ATP-dependent zinc metalloprotease FtsH OS=Cyanidium caldarium
GN=ftsH PE=3 SV=1
Length = 614
Score = 314 bits (804), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 199/474 (41%), Positives = 281/474 (59%), Gaps = 28/474 (5%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
+ GK++A+F E TG+ F+D AG E K ELQEIV LK+ +F N G PKGVLL
Sbjct: 152 NFGKAKARF-HMEAKTGIVFEDVAGIEEAKEELQEIVAFLKDSRKFTNVGATIPKGVLLV 210
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKAIAGEA PFF+ +G++FVEMFVGV ASRV+DLF A+ AP I+FID
Sbjct: 211 GPPGTGKTLLAKAIAGEASAPFFSISGSEFVEMFVGVGASRVRDLFKKAKEKAPCIVFID 270
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +R G IGGG EREQ L Q+LTEMDGF T V+V+ ATNR+D+LD ALLR
Sbjct: 271 EIDAVGRQR-GVGIGGGNDEREQTLNQLLTEMDGFSGDTG-VIVVAATNRIDVLDSALLR 328
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ + V LP+ +GR AILKVH++ K KDVLL+ IA T F+GA+L N+L
Sbjct: 329 PGRFDRQIMVSLPNINGRLAILKVHSKKKKI----HKDVLLEVIARRTPGFSGADLANLL 384
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA ILT R+ I +E+ +++ + G E S +K +AY EA AV A
Sbjct: 385 NEAAILTVRRGKVEITMKEIEDSIDK----IIAGLEGSPLADSRIKRLIAYHEAGHAVAA 440
Query: 586 CHLP--DPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMF 643
LP DP + + T I +++ + + K+ L+ I+ A A R +EE +F
Sbjct: 441 TFLPHHDPVQKV--TLIPRRQAKGLTWFLPNDDQFLVSKSQILSKIIAALAGRAMEEIVF 498
Query: 644 GIDNMCWISSKATLDASRLAEFLILQTGMTAFGKAYYRNQS-------DLV--PNLATKL 694
G+ + ++ + +A ++ + GM+ G N S DL+ L+ ++
Sbjct: 499 GLPEVTIGAANDIKQVTFMARQMVTKFGMSKVGPICLENSSSEVFIGRDLMGRHELSEEM 558
Query: 695 EALRDEYMRFAVEKC----ASVLREYHSAVETITDILLEKGEIKAEEIWDIYKK 744
A D +R ++ C ++L + ++ + + L+EK I+A+E I ++
Sbjct: 559 VAKVDLEVRSILKDCYIQARTILSQNRKLIDRVVNELVEKETIEAKEFMRIVEE 612
>sp|B9KXV3|FTSH1_THERP ATP-dependent zinc metalloprotease FtsH 1 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH1 PE=3 SV=1
Length = 652
Score = 308 bits (789), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 214/505 (42%), Positives = 284/505 (56%), Gaps = 52/505 (10%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S GKSRA+ ++ T VTFDD AG + K ELQEIV LK E+F G P+GVLL
Sbjct: 144 SFGKSRARVFTSNRPT-VTFDDVAGVDEAKEELQEIVEFLKYPEKFAALGARIPRGVLLV 202
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLL++A+AGEAGVPFF+ +G++FVEMFVGV ASRV+DLF A+ AP I+FID
Sbjct: 203 GPPGTGKTLLSRAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKRNAPCIVFID 262
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG +GG EREQ L QIL EMDGF ST+ V+VI ATNR D+LDPALLR
Sbjct: 263 EIDAVGRQRGA-GLGGSHDEREQTLNQILVEMDGFDSSTN-VIVIAATNRPDVLDPALLR 320
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V + P GR AILKVH R K E DV L+++A T F+GA+L+N++
Sbjct: 321 PGRFDRQVVLDRPDLHGRLAILKVHTRGKPL----ESDVDLEDLARQTPGFSGADLENLV 376
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA IL AR++ IG+ EL EA+ R + S I E KL AY EA A++A
Sbjct: 377 NEAAILAARRNKKTIGRRELYEAIDR---VVAGPERKSRRISEREKLMTAYHEAGHALVA 433
Query: 586 CHLP--DPYRPIIETDIKSIRSQPNM----RYAEISGRVFSRKNDYLNAIVRACAPRVIE 639
LP DP + SI ++ M R R F K + + A V E
Sbjct: 434 RMLPHADPVHKV------SIVARGMMGGYTRVLPEEDRFFWTKKQFEAQLAVFMAGLVAE 487
Query: 640 EQMFGIDNMCWISSKATLD---ASRLAEFLILQTGMT------AFGK-----------AY 679
E +F +S+ A D A+ LA ++ + GM+ AFG+ A
Sbjct: 488 ELVF-----QEVSTGAANDIERATTLARRMVTEFGMSERLGPLAFGRKEELVFLGREIAE 542
Query: 680 YRNQSDLVP-NLATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEI 738
RN SD V + ++ L D+ A + +L ++ +E I +L+EK + EI
Sbjct: 543 QRNYSDQVAYEIDQEVRRLIDQ----AYQTAKQILLDHMDKLEKIATLLVEKETLDGHEI 598
Query: 739 WDIYKKAPQIPQPAVSPVDEYGALI 763
++ + P+ P+ ALI
Sbjct: 599 EALFDEPRPRPELVGPPLTRPAALI 623
>sp|O82150|FTSH_TOBAC ATP-dependent zinc metalloprotease FTSH, chloroplastic OS=Nicotiana
tabacum GN=FTSH PE=2 SV=2
Length = 714
Score = 306 bits (784), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 190/476 (39%), Positives = 272/476 (57%), Gaps = 33/476 (6%)
Query: 287 LGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHG 346
G+S++KF ET GVTF D AG + K ELQE+V LKN +++ G PKG LL G
Sbjct: 235 FGRSKSKFQEVPET-GVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVG 293
Query: 347 PPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDE 406
PPGTGKTLLA+A+AGEAGVPFF+ ++FVE+FVGV ASRV+DLF A+S AP I+FIDE
Sbjct: 294 PPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDE 353
Query: 407 IDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRK 466
IDA+G +RG +GGG EREQ + Q+LTEMDGF S V+V+ ATNR D+LD ALLR
Sbjct: 354 IDAVGRQRGA-GMGGGNDEREQTINQLLTEMDGFS-GNSGVIVLAATNRPDVLDSALLRP 411
Query: 467 GRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILN 526
GRFD+ V V P GR IL+VH+R K KDV ++IA T +TGA+LQN++N
Sbjct: 412 GRFDRQVTVDRPDVAGRIKILQVHSRGKAL----TKDVDFEKIARRTPGYTGADLQNLMN 467
Query: 527 EAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLAC 586
EA IL AR++L I ++E+ +AL+R ++ + + +E K +AY EA A++
Sbjct: 468 EAAILAARRELKEISKDEISDALER---IIAGPEKKNAVVSDEKKKLVAYHEAGHALVGA 524
Query: 587 HLPDPYRPIIETDIKSIRSQPNMRY-----AEISGRVFSRKNDYL-NAIVRACAPRVIEE 640
+P+ Y P+ + I + + + ++SR YL N + A RV EE
Sbjct: 525 LMPE-YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRS--YLENQMAVALGERVAEE 581
Query: 641 QMFGIDNMCWISSKATLDASRLAEFLILQTGMT--------------AFGKAYYRNQSDL 686
+FG DN+ +S + SR+A ++ + G + F Q D
Sbjct: 582 VIFGQDNVTTGASNDFMQVSRVARQMVERLGFSKKIGQVAIGGGGGNPFLGQQMSTQKDY 641
Query: 687 VPNLATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIY 742
A ++A E + A E+ ++ + + + +L+EK + EE ++
Sbjct: 642 SMATADVVDAEVRELVERAYERATEIITTHIDILHKLAQLLIEKETVDGEEFMSLF 697
>sp|Q10ZF7|FTSH_TRIEI ATP-dependent zinc metalloprotease FtsH OS=Trichodesmium erythraeum
(strain IMS101) GN=ftsH PE=3 SV=1
Length = 667
Score = 306 bits (783), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 201/491 (40%), Positives = 278/491 (56%), Gaps = 31/491 (6%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
+ GKSRA+F E TGV F+D AG E K ELQE+V LK E+F G PKGVLL
Sbjct: 184 NFGKSRARF-QMEAKTGVLFEDVAGIEEAKEELQEVVSFLKKPEKFTAIGAKIPKGVLLV 242
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKAIAGEAGVPFF+ +G++FVEMFVGV ASRV+DLF A+ AP IIFID
Sbjct: 243 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIIFID 302
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG IGGG EREQ L Q+LTEMDGF+ S +++I ATNR D+LD ALLR
Sbjct: 303 EIDAVGRQRGA-GIGGGNDEREQTLNQLLTEMDGFE-GNSGIIIIAATNRPDVLDVALLR 360
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V V LP+ GR IL+VHARNK E + L+ IA T F+GA+L N+L
Sbjct: 361 PGRFDRQVTVDLPAYKGRLGILEVHARNKKLTPE----ISLEAIARKTPGFSGADLANML 416
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA ILTAR+ + I E+ +A+ R G + + + K +AY E A+L
Sbjct: 417 NEAAILTARRRKEGITPNEIDDAIDR----VTIGLSLTPLLDGKKKRLIAYHELGHALLM 472
Query: 586 CHLPDP-----YRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEE 640
L + I + +QP M I +++R ++ I + R EE
Sbjct: 473 TLLKNSDLLNKVTIIPRSGGVGGFAQPIMDEGMIDSGMYTR-GWLIDRITISLGGRAAEE 531
Query: 641 QMFGIDNMCWISSKATLDASRLAEFLILQTGMTAFGKAYYRNQSDLV----------PNL 690
++FG+ + ++ + LA ++ + GM+ G N + V P
Sbjct: 532 EIFGLAEVTVGAANDIRSVASLAREMVTRYGMSDLGPLALENPNGEVFLGRGWQSQQPEY 591
Query: 691 ATKLEALRDEYMRFAV----EKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
+ ++ D +R V EK ++RE ++ + D+L+EK I+ +E I +
Sbjct: 592 SEEVAIKIDHQIRTMVFHCYEKARKIIRENRVLMDRLVDLLIEKETIEGDEFRRIVSEYT 651
Query: 747 QIPQPAVSPVD 757
++P+ S ++
Sbjct: 652 ELPKKQKSLIN 662
>sp|Q55700|FTSH2_SYNY3 ATP-dependent zinc metalloprotease FtsH 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH2 PE=1 SV=1
Length = 627
Score = 305 bits (780), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 194/478 (40%), Positives = 270/478 (56%), Gaps = 26/478 (5%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
+ GKS+A+F + TGV FDD AG + K ELQE+V LK E F G PKGVLL
Sbjct: 153 NFGKSKARF-QMDAKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAKIPKGVLLV 211
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKAIAGEAGVPFF+ +G++FVEMFVGV ASRV+DLF A+ AP +IFID
Sbjct: 212 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFID 271
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG IGGG EREQ L Q+LTEMDGF+ +T +++I ATNR D+LD AL+R
Sbjct: 272 EIDAVGRQRGA-GIGGGNDEREQTLNQLLTEMDGFEGNTG-IIIIAATNRPDVLDSALMR 329
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V V P GR IL+VHARNK E V + IA T F+GA+L N+L
Sbjct: 330 PGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPE----VSIDSIARRTPGFSGADLANLL 385
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA ILTAR+ I E+ +A+ R G E + + + K +AY E A++
Sbjct: 386 NEAAILTARRRKSAITLLEIDDAVDR----VVAGMEGTPLVDSKSKRLIAYHEVGHAIVG 441
Query: 586 CHLPDPYRPIIE-TDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMFG 644
L D + P+ + T I ++Q + + + K + I A R EE++FG
Sbjct: 442 TLLKD-HDPVQKVTLIPRGQAQGLTWFTPNEEQGLTTKAQLMARIAGAMGGRAAEEEVFG 500
Query: 645 IDNMCWISSKATLDASRLAEFLILQTGMTAFG-------------KAYYRNQSDLVPNLA 691
D + + + +A ++ + GM+ G N+S+ +A
Sbjct: 501 DDEVTTGAGGDLQQVTEMARQMVTRFGMSNLGPISLESSGGEVFLGGGLMNRSEYSEEVA 560
Query: 692 TKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAPQIP 749
T+++A + + +++E V+ + D+L+EK I EE I + ++P
Sbjct: 561 TRIDAQVRQLAEQGHQMARKIVQEQREVVDRLVDLLIEKETIDGEEFRQIVAEYAEVP 618
>sp|Q1XDF9|FTSH_PORYE ATP-dependent zinc metalloprotease FtsH OS=Porphyra yezoensis
GN=ftsH PE=3 SV=1
Length = 628
Score = 304 bits (779), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 200/484 (41%), Positives = 273/484 (56%), Gaps = 36/484 (7%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S GKS+A F E TGV F+D AG E K E QE+V LK E F G PKGVLL
Sbjct: 154 SFGKSKALF-QMEAKTGVVFNDVAGVEEAKEEFQEVVTFLKQPESFTAVGAKIPKGVLLV 212
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKAIAGEA VPFF+ +G++FVEMFVGV ASRV+DLF A+ AP I+FID
Sbjct: 213 GPPGTGKTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCIVFID 272
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +R G +GGG EREQ L Q+LTEMDGF+ +T V+VI ATNR DILD ALLR
Sbjct: 273 EIDAVGRQR-GTGVGGGNDEREQTLNQLLTEMDGFEGNTG-VIVIAATNRADILDSALLR 330
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V V +P GR AIL+VHA+NK E V L+ IA T F+GA+L N+L
Sbjct: 331 PGRFDRQVSVDVPDFKGRLAILEVHAKNKKM----EPKVSLETIARRTPGFSGADLANLL 386
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA ILTAR+ + + E+ ++ R G E + I + K +AY E A++
Sbjct: 387 NEAAILTARRRKNAMTMSEIDTSIDR----VVAGMEGTPLIDSKSKRLIAYHEVGHAIIG 442
Query: 586 CHLP--DPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMF 643
L DP + + T I +++ + + ++ L IV A R EE +F
Sbjct: 443 SLLEHHDPVQKV--TLIPRGQARGLTWFTPSDDQSLISRSQILARIVGALGGRAAEEIIF 500
Query: 644 GIDNMCWISSKATLDASRLAEFLILQTGMTAFGKAYYRNQ-------------SDLVPNL 690
G + +S + +A ++ + GM+ G +Q S+ +
Sbjct: 501 GDAEVTTGASNDLQQVTSMARQMVTRFGMSKIGPLSLESQGGDPFLGRGMGGGSEYSDEV 560
Query: 691 ATKLEALRDEYMRFAVEKCAS----VLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
AT + D+ +R V +C + ++ + ++ + D+L+EK I+ E DI K+
Sbjct: 561 ATNI----DKQVREIVSECYAQAKHIIIDNRVVIDRLVDLLIEKETIEGNEFRDIVKEYT 616
Query: 747 QIPQ 750
IP+
Sbjct: 617 AIPE 620
>sp|P51327|FTSH_PORPU ATP-dependent zinc metalloprotease FtsH OS=Porphyra purpurea
GN=ftsH PE=3 SV=1
Length = 628
Score = 304 bits (779), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 197/480 (41%), Positives = 271/480 (56%), Gaps = 28/480 (5%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S GKS+A F E TGV F+D AG E K E QE+V LK E F G PKGVLL
Sbjct: 154 SFGKSKALF-QMEAKTGVVFNDVAGVEEAKEEFQEVVTFLKQPESFTAVGAKIPKGVLLV 212
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKAIAGEAGVPFF+ +G++FVEMFVGV ASRV+DLF A+ AP I+FID
Sbjct: 213 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCIVFID 272
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +R G +GGG EREQ L Q+LTEMDGF+ +T V+VI ATNR DILD ALLR
Sbjct: 273 EIDAVGRQR-GTGVGGGNDEREQTLNQLLTEMDGFEGNTG-VIVIAATNRADILDSALLR 330
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V V +P GR AIL+VHA+NK S+ V L+ IA T F+GA+L N+L
Sbjct: 331 PGRFDRQVSVDVPDFRGRLAILEVHAKNKKMESK----VSLETIARRTPGFSGADLANLL 386
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA ILTAR+ + E+ ++ R G E + I + K +AY E A++
Sbjct: 387 NEAAILTARRRKSAMTMSEIDTSIDR----VVAGLEGTPLIDSKSKRLIAYHEVGHAIIG 442
Query: 586 CHLP--DPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMF 643
L DP + + T I +++ + + ++ L IV A R EE +F
Sbjct: 443 SLLEHHDPVQKV--TLIPRGQARGLTWFTPSDDQSLISRSQILARIVGALGGRAAEEIIF 500
Query: 644 GIDNMCWISSKATLDASRLAEFLILQTGMTAFGKAYYRNQ-------------SDLVPNL 690
G + +S + +A ++ + GM+ G +Q S+ +
Sbjct: 501 GDAEVTTGASNDLQQVTSMARQMVTRFGMSKIGPLSLESQGSDPFLGRGMGGGSEYSDEV 560
Query: 691 ATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAPQIPQ 750
AT ++ E + ++ ++++ ++ + D+L+EK I+ E I K+ IP+
Sbjct: 561 ATNIDKQVREIVSECYKEAKKIVKDNRVVMDRLVDLLIEKETIEGNEFRHIVKEYTAIPE 620
>sp|Q5Z974|FTSH1_ORYSJ ATP-dependent zinc metalloprotease FTSH 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH1 PE=2 SV=1
Length = 686
Score = 303 bits (775), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 193/477 (40%), Positives = 271/477 (56%), Gaps = 35/477 (7%)
Query: 287 LGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHG 346
G+S++KF ET GVTF D AG + K ELQE+V LKN +++ G PKG LL G
Sbjct: 214 FGRSKSKFQEVPET-GVTFVDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVG 272
Query: 347 PPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDE 406
PPGTGKTLLA+A+AGEAGVPFF+ ++FVE+FVGV ASRV+DLF A++ AP I+FIDE
Sbjct: 273 PPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKAPCIVFIDE 332
Query: 407 IDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRK 466
IDA+G +RG +GGG EREQ + Q+LTEMDGF S V+V+ ATNR D+LD ALLR
Sbjct: 333 IDAVGRQRGA-GLGGGNDEREQTINQLLTEMDGF-AGNSGVIVLAATNRPDVLDAALLRP 390
Query: 467 GRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILN 526
GRFD+ V V P GR IL+VH+R K KDV ++IA T FTGA+LQN++N
Sbjct: 391 GRFDRQVTVDRPDVAGRVKILEVHSRGKAL----AKDVDFEKIARRTPGFTGADLQNLMN 446
Query: 527 EAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRL-AYREAAVAVLA 585
EA IL AR+DL I ++E+ +AL+R G E + E K RL AY EA A++
Sbjct: 447 EAAILAARRDLKEISKDEISDALER----IIAGPEKKNAVVSEEKRRLVAYHEAGHALVG 502
Query: 586 CHLPDPYRPIIETDIKSIRSQPNMRY-----AEISGRVFSRKNDYL-NAIVRACAPRVIE 639
+P+ Y P+ + I + + + ++SR YL N + A RV E
Sbjct: 503 ALMPE-YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRS--YLENQMAVALGGRVAE 559
Query: 640 EQMFGIDNMCWISSKATLDASRLAEFLILQTGMT--------------AFGKAYYRNQSD 685
E +FG +N+ +S + SR+A ++ + G + F +Q D
Sbjct: 560 EVIFGQENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKD 619
Query: 686 LVPNLATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIY 742
A ++A E + A + ++ + + + +L+EK + EE ++
Sbjct: 620 YSMATADVVDAEVRELVEKAYSRATQIITTHIDILHKLAQLLMEKETVDGEEFMSLF 676
>sp|Q9FH02|FTSH5_ARATH ATP-dependent zinc metalloprotease FTSH 5, chloroplastic
OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1
Length = 704
Score = 303 bits (775), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 198/477 (41%), Positives = 271/477 (56%), Gaps = 35/477 (7%)
Query: 287 LGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHG 346
G+S++KF ET GVTF D AG + K ELQE+V LKN +++ G PKG LL G
Sbjct: 232 FGRSKSKFQEVPET-GVTFGDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVG 290
Query: 347 PPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDE 406
PPGTGKTLLA+A+AGEAGVPFF+ ++FVE+FVGV ASRV+DLF A+S AP I+FIDE
Sbjct: 291 PPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDE 350
Query: 407 IDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRK 466
IDA+G +RG +GGG EREQ + Q+LTEMDGF S V+V+ ATNR D+LD ALLR
Sbjct: 351 IDAVGRQRGA-GMGGGNDEREQTINQLLTEMDGFS-GNSGVIVLAATNRPDVLDSALLRP 408
Query: 467 GRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILN 526
GRFD+ V V P GR ILKVH+R K KDV +++A T FTGA+LQN++N
Sbjct: 409 GRFDRQVTVDRPDVAGRVQILKVHSRGKAI----GKDVDYEKVARRTPGFTGADLQNLMN 464
Query: 527 EAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRL-AYREAAVAVLA 585
EA IL AR++L I ++E+ +AL+R G E + E K RL AY EA A++
Sbjct: 465 EAAILAARRELKEISKDEISDALER----IIAGPEKKNAVVSEEKKRLVAYHEAGHALVG 520
Query: 586 CHLPDPYRPIIETDIKSIRSQPNMRY-----AEISGRVFSRKNDYL-NAIVRACAPRVIE 639
+P+ Y P+ + I + + + ++SR YL N + A RV E
Sbjct: 521 ALMPE-YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRS--YLENQMAVALGGRVAE 577
Query: 640 EQMFGIDNMCWISSKATLDASRLAEFLILQTGMTAFGKAYYRNQSDLVPNLATKLEALRD 699
E +FG +N+ +S + SR+A ++ + G + + P L + + +D
Sbjct: 578 EVIFGDENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAVGGAGGNPFLGQSMSSQKD 637
Query: 700 EYMRFA----VEKCASVLREYHSAVETIT----------DILLEKGEIKAEEIWDIY 742
M A E V + Y A E IT +L+EK + EE ++
Sbjct: 638 YSMATADVVDAEVRELVEKAYVRAKEIITTQIDILHKLAQLLIEKETVDGEEFMSLF 694
>sp|Q39102|FTSH1_ARATH ATP-dependent zinc metalloprotease FTSH 1, chloroplastic
OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2
Length = 716
Score = 302 bits (773), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 192/477 (40%), Positives = 271/477 (56%), Gaps = 35/477 (7%)
Query: 287 LGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHG 346
G+S++KF ET GV+F D AG + K ELQE+V LKN +++ G PKG LL G
Sbjct: 244 FGRSKSKFQEVPET-GVSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVG 302
Query: 347 PPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDE 406
PPGTGKTLLA+A+AGEAGVPFF+ ++FVE+FVGV ASRV+DLF A+S AP I+FIDE
Sbjct: 303 PPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDE 362
Query: 407 IDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRK 466
IDA+G +RG +GGG EREQ + Q+LTEMDGF S V+V+ ATNR D+LD ALLR
Sbjct: 363 IDAVGRQRGA-GMGGGNDEREQTINQLLTEMDGFS-GNSGVIVLAATNRPDVLDSALLRP 420
Query: 467 GRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILN 526
GRFD+ V V P GR IL+VH+R K KDV ++A T FTGA+LQN++N
Sbjct: 421 GRFDRQVTVDRPDVAGRVKILQVHSRGKAL----GKDVDFDKVARRTPGFTGADLQNLMN 476
Query: 527 EAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRL-AYREAAVAVLA 585
EA IL AR++L I ++E+ +AL+R G E + E K RL AY EA A++
Sbjct: 477 EAAILAARRELKEISKDEISDALER----IIAGPEKKNAVVSEEKKRLVAYHEAGHALVG 532
Query: 586 CHLPDPYRPIIETDIKSIRSQPNMRY-----AEISGRVFSRKNDYL-NAIVRACAPRVIE 639
+P+ Y P+ + I + + + ++SR YL N + A RV E
Sbjct: 533 ALMPE-YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRS--YLENQMAVALGGRVAE 589
Query: 640 EQMFGIDNMCWISSKATLDASRLAEFLILQTGMT--------------AFGKAYYRNQSD 685
E +FG +N+ +S + SR+A +I + G + F +Q D
Sbjct: 590 EVIFGDENVTTGASNDFMQVSRVARQMIERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKD 649
Query: 686 LVPNLATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIY 742
A ++A E + A ++ ++ + + + +L+EK + EE ++
Sbjct: 650 YSMATADIVDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEFMSLF 706
>sp|Q9TJ83|FTSH_CYAME ATP-dependent zinc metalloprotease FtsH OS=Cyanidioschyzon merolae
GN=ftsH PE=3 SV=1
Length = 603
Score = 302 bits (773), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 190/477 (39%), Positives = 274/477 (57%), Gaps = 26/477 (5%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
+ GKS+A+F +T G+ FDD AG E K EL E+V LKN +F G PKGVLL
Sbjct: 135 NFGKSKARFQMVAKT-GIMFDDVAGIEEAKEELAEVVAFLKNPSKFLAVGASIPKGVLLV 193
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKAIAGEA VPFF+ +G++FVEMFVGV ASRV+DLF A+ AP ++FID
Sbjct: 194 GPPGTGKTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKQNAPCLVFID 253
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG IGGG EREQ L Q+LTEMDGF+ +T V+VI ATNR+D+LD ALLR
Sbjct: 254 EIDAVGRQRGA-GIGGGNDEREQTLNQLLTEMDGFEGNTG-VIVIAATNRVDVLDAALLR 311
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ + V +P R AILKVHA K + V L+ +A T F GA+L N+L
Sbjct: 312 PGRFDRQIMVSMPDVKSRIAILKVHANQKKLHPQ----VSLEAVARRTAGFAGADLANLL 367
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA IL R+ L I +E+ +A+ R G E + + ++K +AY E A+ A
Sbjct: 368 NEAAILAVRRGLKQITWKEIDDAIDR----VIAGMEGTPIMDGKIKRLIAYHETGHALTA 423
Query: 586 CHLPDPYRPIIETDIKSIRSQPNMR-YAEISGRVFSRKNDYLNAIVRACAPRVIEEQMFG 644
LP+ + P+ + + R + + + + R K+ ++ I+ A R EE +FG
Sbjct: 424 TLLPN-HPPVQKVTLIPRRQAKGLTWFMQDNERDLLSKSQLMSMIMVALGGRAAEEAVFG 482
Query: 645 IDNMCWISSKATLDASRLAEFLILQTGMTAFG---------KAYYRNQSDLVPNLATKLE 695
+ +S + LA ++ + GM++ G + + L+P ++ ++
Sbjct: 483 NAEVTTGASNDLQQVTNLARQMVTRFGMSSLGPLCLETGNEEIFLGRDMRLMPEVSEEVI 542
Query: 696 ALRDEYMRFAVEKCASVLREYHSA----VETITDILLEKGEIKAEEIWDIYKKAPQI 748
A D +R +E C + E A ++ I + L+EK + +E + +A ++
Sbjct: 543 AQIDAQVRGMIEACYEKVLELMQANRVVMDRIVEELMEKETLDGKEFRQLVSQAARL 599
>sp|D1C1U7|FTSH1_SPHTD ATP-dependent zinc metalloprotease FtsH 1 OS=Sphaerobacter
thermophilus (strain DSM 20745 / S 6022) GN=ftsH1 PE=3
SV=1
Length = 653
Score = 300 bits (769), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 205/502 (40%), Positives = 283/502 (56%), Gaps = 44/502 (8%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S GKSRA+ + + T VTF D AG E K EL E+V LK ++F + G P+GVLL
Sbjct: 144 SFGKSRARMFTGNKPT-VTFADVAGVEEAKEELVEVVEFLKYPDKFASLGARIPRGVLLV 202
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLL++A+AGEAGVPFF+ +G++FVEMFVGV ASRV+DLF A+ AP I+FID
Sbjct: 203 GPPGTGKTLLSRAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKRNAPCIVFID 262
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG +GG EREQ L QIL EMDGF ST+ V+VI ATNR D+LDPALLR
Sbjct: 263 EIDAVGRQRGA-GLGGSHDEREQTLNQILVEMDGFD-STTNVIVIAATNRPDVLDPALLR 320
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V + P GR AIL+VH+R K E DV L+E+A T F+GA+L+N++
Sbjct: 321 PGRFDRQVVLDRPDIAGRRAILEVHSRGKPL----ESDVDLEELARQTPGFSGADLENLV 376
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA IL AR++ IG+ EL EA+ R + S + E KL AY EA A++A
Sbjct: 377 NEAAILAARRNKKTIGRRELTEAIDR---VIAGPERKSRVLSEREKLMTAYHEAGHALVA 433
Query: 586 CHLP--DPYRPIIETDIKSIRSQPNM----RYAEISGRVFSRKNDYLNAIVRACAPRVIE 639
LP DP + SI ++ M R R F K + + + V E
Sbjct: 434 RMLPHADPVHKV------SIVARGMMGGYTRVLPEEDRFFWTKKQFEDQLAVFMGGHVAE 487
Query: 640 EQMFGIDNMCWISSKATLD---ASRLAEFLILQTGMT-AFGKAYYRNQSDLV-------- 687
E +F IS+ A D A+ LA ++ + GM+ G + + +LV
Sbjct: 488 ELVF-----QEISTGAANDIERATNLARRMVTEYGMSKTLGPLAFGRKEELVFLGREINE 542
Query: 688 -PNLATKLEALRDEYMR----FAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIY 742
N + ++ + D+ +R A ++ +L ++ +E I +L+E I E+ ++
Sbjct: 543 QRNYSDEVAYMIDQEIRSLIDTAYKRAHEILSQHMDKLEAIAMLLMEAETIDGHELEALF 602
Query: 743 KKAPQIPQPAVSPVDEYGALIY 764
+ PQ PV AL +
Sbjct: 603 DEPRPRPQLVGPPVTRPAALAH 624
>sp|Q67JH0|FTSH3_SYMTH ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH3 PE=3 SV=1
Length = 626
Score = 300 bits (768), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 191/464 (41%), Positives = 271/464 (58%), Gaps = 37/464 (7%)
Query: 287 LGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHG 346
GKSRA+ ++ ++ VTFDD AG + +K EL EIV LK+ + + G PKGVLL+G
Sbjct: 139 FGKSRARLVT-DDRKRVTFDDVAGIDEVKEELAEIVDFLKHPKRYLELGARIPKGVLLYG 197
Query: 347 PPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDE 406
PPGTGKTLLAKA+AGEAGVPFF+ +G+DFVEMFVGV ASRV+DLF A+ +P I+FIDE
Sbjct: 198 PPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSPCIVFIDE 257
Query: 407 IDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRK 466
IDA+G +RG GGG EREQ L Q+L EMDGF + +++I ATNR D+LDPALLR
Sbjct: 258 IDAVGRQRGA-GYGGGHDEREQTLNQLLVEMDGFSANEG-IIIIAATNRPDVLDPALLRP 315
Query: 467 GRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILN 526
GRFD+ + + P GR AI +VHA+ K E DV L+ +A+ T FTGA++ N++N
Sbjct: 316 GRFDRQIVIDRPDLKGRLAIFQVHAKGKPL----EPDVDLEVLAKRTPGFTGADIANLMN 371
Query: 527 EAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRL-AYREAAVAVLA 585
EA +L AR+ I +++ +A+ R G E + + E + R+ AY EA AV+
Sbjct: 372 EAALLAARRRKKKISMQDVEDAIDR---VLAGGPEKKSRVISEKEKRVTAYHEAGHAVVG 428
Query: 586 CHLP--DPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMF 643
LP DP I T I R+ + + R K++ L+ + A R EE F
Sbjct: 429 HMLPHMDPLHKI--TIIPRGRAMGYTLFLPVEDRYNISKSEILDRMTMALGGRAAEEITF 486
Query: 644 GIDNMCWISSKATLDASRLAEF---LILQTGMT-AFGKAYYRNQSDLV---------PNL 690
G I+S A D R ++ ++ + GM+ G Y + D V N
Sbjct: 487 G-----EITSGAQDDIERTTQWARRMVTEWGMSEKLGPLTYGMKQDEVFLARDMTRLRNY 541
Query: 691 ATKLEALRDE----YMRFAVEKCASVLREYHSAVETITDILLEK 730
+ ++ L DE ++ A ++ +L E+ A+E ++++LLEK
Sbjct: 542 SEEVAGLIDEEVRKFVHMAYQRAIDILTEHRDALEKVSEVLLEK 585
>sp|Q9BAE0|FTSH_MEDSA ATP-dependent zinc metalloprotease FTSH, chloroplastic OS=Medicago
sativa GN=FTSH PE=2 SV=1
Length = 706
Score = 300 bits (767), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 189/476 (39%), Positives = 269/476 (56%), Gaps = 34/476 (7%)
Query: 287 LGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHG 346
G+S++KF ET GVTF D AG + K ELQE+V LKN +++ G PKG LL G
Sbjct: 235 FGRSKSKFQEVPET-GVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVG 293
Query: 347 PPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDE 406
PPGTGKTLLA+A+AGEAG PFF+ ++FVE+FVGV ASRV+DLF A+S AP I+FIDE
Sbjct: 294 PPGTGKTLLARAVAGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDE 353
Query: 407 IDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRK 466
IDA+G +RG +GGG EREQ + Q+LTEMDGF S V+V+ ATNR D+LD ALLR
Sbjct: 354 IDAVGRQRGA-GLGGGNDEREQTINQLLTEMDGFS-GNSGVIVLAATNRPDVLDSALLRP 411
Query: 467 GRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILN 526
GRFD+ V V P GR IL+VH+R K KDV +IA T FTG +LQN++N
Sbjct: 412 GRFDRQVTVDRPDVAGRVKILQVHSRGKAL----AKDVDFDKIARRTPGFTGVDLQNLMN 467
Query: 527 EAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLAC 586
EA IL AR+DL I ++E+ +AL+R ++ + + EE K +AY EA A++
Sbjct: 468 EAAILAARRDLKEISKDEIADALER---IIAGPEKKNAVVSEEKKKLVAYHEAGHALVGA 524
Query: 587 HLPDPYRPIIETDIKSIRSQPNMRY-----AEISGRVFSRKNDYL-NAIVRACAPRVIEE 640
+P+ Y P+ + I + + + ++SR YL N + A RV EE
Sbjct: 525 LMPE-YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRS--YLENQMAVALGGRVAEE 581
Query: 641 QMFGIDNMCWISSKATLDASRLAEFLILQTGMTAFGKAYYRNQSDLVPNLATKLEALRD- 699
+FG DN+ +S + SR+A ++ + G + P L ++ + +D
Sbjct: 582 -VFGQDNVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGGGGNPFLGQQMSSQKDY 640
Query: 700 -------------EYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIY 742
E + A E+ ++ + + + +L+EK + EE ++
Sbjct: 641 SMATADIVDKEVRELVDKAYERATQIINTHIDILHKLAQLLIEKETVDGEEFMSLF 696
>sp|Q655S1|FTSH2_ORYSJ ATP-dependent zinc metalloprotease FTSH 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH2 PE=3 SV=1
Length = 676
Score = 299 bits (766), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 197/483 (40%), Positives = 266/483 (55%), Gaps = 37/483 (7%)
Query: 287 LGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHG 346
G+SRAKF E TGVTFDD AG + K++ E+V LK E F G PKGVLL G
Sbjct: 196 FGQSRAKF-QMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVG 254
Query: 347 PPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDE 406
PPGTGKTLLAKAIAGEAGVPFF+ +G++FVEMFVGV ASRV+DLF A+ AP I+F+DE
Sbjct: 255 PPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDE 314
Query: 407 IDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRK 466
IDA+G +R G IGGG EREQ L Q+LTEMDGF+ +T ++VI ATNR DILD ALLR
Sbjct: 315 IDAVGRQR-GTGIGGGNDEREQTLNQLLTEMDGFEGNTG-IIVIAATNRADILDSALLRP 372
Query: 467 GRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILN 526
GRFD+ V V +P GR ILKVH NK F + DV L+ IA T F+GA+L N+LN
Sbjct: 373 GRFDRQVSVDVPDVRGRTEILKVHGSNKKF----DTDVSLEVIAMRTPGFSGADLANLLN 428
Query: 527 EAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLAC 586
EA IL R+ I +E+ +++ R G E + + K +AY E A+
Sbjct: 429 EAAILAGRRGRTAISSKEIDDSIDR----IVAGMEGTVMTDGKSKSLVAYHEVGHAICGT 484
Query: 587 HLP--DPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMFG 644
P DP + + T I +++ + + + IV R EE +FG
Sbjct: 485 LTPGHDPVQKV--TLIPRGQARGLTWFIPMDDPTLISRQQLFARIVGGLGGRAAEEIIFG 542
Query: 645 IDNMCWISSKATLDASRLAEFLILQTGMTAFG----------------KAYYRN--QSDL 686
+ ++ + LA+ +++ GM+ G + RN L
Sbjct: 543 EPEVTTGAAGDLQQITGLAKQMVVTFGMSDIGPWSLMDSGAQSGDVIMRMMARNSMSEKL 602
Query: 687 VPNLATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
++ T ++ L DE A E S +R A++ I ++LLEK + +E I +
Sbjct: 603 AEDIDTAVKRLSDE----AYEIALSQIRSNREAMDKIVEVLLEKETLSGDEFRAILSEFT 658
Query: 747 QIP 749
+IP
Sbjct: 659 EIP 661
>sp|D1CDT8|FTSH_THET1 ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum
(strain ATCC BAA-798 / YNP1) GN=ftsH PE=3 SV=1
Length = 646
Score = 299 bits (766), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 198/490 (40%), Positives = 279/490 (56%), Gaps = 33/490 (6%)
Query: 281 RRALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPK 340
++ L LGKSRAK +A E+T VTFDD AG E K+EL EIV LKN +++Q G PK
Sbjct: 172 QQGLFGLGKSRAKRYNATESTRVTFDDVAGIEEAKQELAEIVDFLKNPQKYQRLGGTIPK 231
Query: 341 GVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPS 400
GVLL GPPGTGKTLLA+A+AGEAGVPFF+ +G++FVEM VGV A+RV++LF A+ AP
Sbjct: 232 GVLLIGPPGTGKTLLARAVAGEAGVPFFSMSGSEFVEMIVGVGAARVRELFQQAKKEAPC 291
Query: 401 IIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILD 460
IIF+DE+DAIG +RG GG EREQ L Q+L EMDGF S V+V+ ATNR D+LD
Sbjct: 292 IIFVDELDAIGRRRGSSINVGGHDEREQTLNQLLVEMDGFD-SRQGVIVLAATNRPDVLD 350
Query: 461 PALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAE 520
PALLR GRFD+ V V P K GR IL+VH RN + ++ L EIA T GA+
Sbjct: 351 PALLRPGRFDRRVVVQRPDKVGRLKILQVHTRNVPL----DPNLDLSEIAAATPGLVGAD 406
Query: 521 LQNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAA 580
L+N++NEA +L AR+ +Y+ +E+ +AL++ G E I EE + R+AY E+
Sbjct: 407 LRNLVNEAALLAARRGKNYVDREDFFDALEK----ITLGAERKLLISEEDRRRVAYHESG 462
Query: 581 VAVLACHLPDPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNA-IVRACAPRVIE 639
A+L LP+ P+ + I + Y ++ YL + I A R E
Sbjct: 463 HALLGLLLPE-ADPVHKVTIIPRGQALGVTYQTPEDDRYNYTERYLRSRITAALGGRAAE 521
Query: 640 EQMFGIDNMCWISSKATLDASRLAEF---LILQTGMTA-FGKAYYR--NQSDLV-PNLAT 692
E +FG +++ A D ++ E ++ + GM+ G Y Q D + PN T
Sbjct: 522 ELVFGT-----VTTGAENDLKQVTEIARQMVTRWGMSKEVGLVYLSPDGQEDFLGPNPIT 576
Query: 693 ------KLEALRDEYMRFAVEKC----ASVLREYHSAVETITDILLEKGEIKAEEIWDIY 742
L + D R +++C S+L ++ + + LL + + ++I +I
Sbjct: 577 SREYSESLATVIDRETRRIIDECYAEALSLLNRERQRLDNLAEALLREESLDEQQIREIV 636
Query: 743 KKAPQIPQPA 752
+ P+PA
Sbjct: 637 GLGEKQPEPA 646
>sp|B0K5A3|FTSH1_THEPX ATP-dependent zinc metalloprotease FtsH 1 OS=Thermoanaerobacter sp.
(strain X514) GN=ftsH1 PE=3 SV=1
Length = 611
Score = 298 bits (764), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 200/475 (42%), Positives = 279/475 (58%), Gaps = 34/475 (7%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S GKSRA+ I+ ++ VTF+D AG + K ELQEIV LK ++F G PKGVLL
Sbjct: 142 SFGKSRARMITDKDKR-VTFNDVAGADEEKEELQEIVEFLKYPKKFLELGARIPKGVLLV 200
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKA+AGEAGVPFF+ +G+DFVEMFVGV A+RV+DLF A+ AP I+FID
Sbjct: 201 GPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGAARVRDLFDQAKKNAPCIVFID 260
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG +GGG EREQ L Q+L EMDGF V+ ++VI ATNR DILDPALLR
Sbjct: 261 EIDAVGRQRGA-GLGGGHDEREQTLNQLLVEMDGFSVNEG-IIVIAATNRPDILDPALLR 318
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ + VG+P GR ILK+H+RNK DV LQ +A T FTGA+L+N++
Sbjct: 319 PGRFDRHITVGIPDIKGREEILKIHSRNKPLAP----DVSLQVLARRTPGFTGADLENLM 374
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA +L AR+ L I EL EA+ R ++ S + E+ K +AY EA AV+A
Sbjct: 375 NEAALLAARRGLKQITMAELEEAITR---VIAGPEKRSRIMSEKDKKLVAYHEAGHAVVA 431
Query: 586 CHLPDPYRPIIE-TDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMFG 644
LP+ P+ E T I R+ + + K++ ++ IV RV E +
Sbjct: 432 KLLPNT-PPVHEVTIIPRGRAGGYTMLLPEEDKYYMSKSEMMDEIVHLLGGRVAESLV-- 488
Query: 645 IDNMCWISSKATLD---ASRLAEFLILQTGMTA-FGKAYYRNQSDLV---------PNLA 691
+ IS+ A D A+ +A ++ + GM+ G + +S+ V N +
Sbjct: 489 ---LNDISTGAQNDIERATNIARKMVTEYGMSERLGPMTFGTKSEEVFLGRDLGRTRNYS 545
Query: 692 TKLEALRDEYMRFAVE----KCASVLREYHSAVETITDILLEKGEIKAEEIWDIY 742
++ A D ++ +E + S+L+E + + L+EK ++ EE ++
Sbjct: 546 EEVAAEIDREIKRIIEEAYKRAESLLKENIDKLHRVAKALIEKEKLNGEEFEKVF 600
>sp|Q39444|FTSH_CAPAN ATP-dependent zinc metalloprotease FTSH, chloroplastic (Fragment)
OS=Capsicum annuum GN=FTSH PE=2 SV=1
Length = 662
Score = 298 bits (762), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 177/393 (45%), Positives = 244/393 (62%), Gaps = 19/393 (4%)
Query: 287 LGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHG 346
G+S++KF ET GVTF D AG + K ELQE+V LKN +++ G PKG LL G
Sbjct: 212 FGRSKSKFQEVPET-GVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVG 270
Query: 347 PPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDE 406
PPGTGKTLLA+A+AGEAGVPFF+ ++FVE+FVGV ASRV+ LF +A+S AP I+FIDE
Sbjct: 271 PPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENAKSKAPCIVFIDE 330
Query: 407 IDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRK 466
IDA+G +RG +GGG EREQ + Q+LTEMDGF S V+V+ ATNR D+LD ALLR
Sbjct: 331 IDAVGRQRGA-GLGGGNDEREQTINQLLTEMDGFS-GNSGVIVLAATNRPDVLDSALLRP 388
Query: 467 GRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILN 526
G+FD+ V V P GR IL+VH+R K KDV +IA T FTGA+LQN++N
Sbjct: 389 GKFDRQVTVDRPDVAGRVRILQVHSRGKAL----AKDVDFDKIARRTPGFTGADLQNLMN 444
Query: 527 EAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLAC 586
EA IL AR+DL I ++E+ +AL+R ++ + + +E K +AY EA A++
Sbjct: 445 EAAILAARRDLKEISKDEISDALER---IIAGPEKKNAVVSDEKKKLVAYHEAGHALVGA 501
Query: 587 HLPDPYRPIIETDIKSIRSQPNMRY-----AEISGRVFSRKNDYL-NAIVRACAPRVIEE 640
+P+ Y P+ + I + + + ++SR YL N + A RV EE
Sbjct: 502 LMPE-YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRS--YLENQMAVALGGRVAEE 558
Query: 641 QMFGIDNMCWISSKATLDASRLAEFLILQTGMT 673
+FG DN+ +S + SR+A ++ + G +
Sbjct: 559 VIFGEDNVTTGASNDFMQVSRVARQMVERLGFS 591
>sp|P72991|FTSH3_SYNY3 ATP-dependent zinc metalloprotease FtsH 3 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH3 PE=1 SV=1
Length = 616
Score = 297 bits (761), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 194/476 (40%), Positives = 276/476 (57%), Gaps = 39/476 (8%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
+ GKS+A+ + E T VTF D AG E K EL E+V LKN + F G PKGVLL
Sbjct: 142 NFGKSKAR-VQMEPQTQVTFGDVAGIEQAKLELTEVVDFLKNADRFTELGAKIPKGVLLV 200
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKA+AGEAGVPFF+ +G++FVEMFVGV ASRV+DLF A++ AP I+FID
Sbjct: 201 GPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKANAPCIVFID 260
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG +GGG EREQ L Q+LTEMDGF+ +T ++++ ATNR D+LD AL+R
Sbjct: 261 EIDAVGRQRGA-GLGGGNDEREQTLNQLLTEMDGFEGNTG-IIIVAATNRPDVLDSALMR 318
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V V P GR IL VHAR K +DV L +IA T FTGA+L N+L
Sbjct: 319 PGRFDRQVVVDRPDYAGRREILNVHARGKTL----SQDVDLDKIARRTPGFTGADLSNLL 374
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA IL AR++L I +E+ +A+ R ++ + + E+ K +AY EA A++
Sbjct: 375 NEAAILAARRNLTEISMDEVNDAIDR---VLAGPEKKNRVMSEKRKTLVAYHEAGHALVG 431
Query: 586 CHLPDPYRPIIETDIKSIRSQPNMRY-----AEISGRVFSRKNDYL-NAIVRACAPRVIE 639
+PD Y P+ + I + + + ++SR YL N + A R+ E
Sbjct: 432 ALMPD-YDPVQKISIIPRGRAGGLTWFTPSEDRMESGLYSRS--YLQNQMAVALGGRIAE 488
Query: 640 EQMFGIDNMCWISSKATLDASRLAEFLILQTGMT------AFGK-----------AYYRN 682
E +FG + + +S +R+A ++ + GM+ A G+ A R+
Sbjct: 489 EIIFGEEEVTTGASNDLQQVARVARQMVTRFGMSDRLGPVALGRQGGGVFLGRDIASDRD 548
Query: 683 QSDLVPNLATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEI 738
SD A ++ + + A ++ VL E ++ + +IL+EK + +EE+
Sbjct: 549 FSD---ETAAAIDEEVSQLVDQAYQRAKQVLVENRGILDQLAEILVEKETVDSEEL 601
>sp|B3DY14|FTSH2_METI4 ATP-dependent zinc metalloprotease FtsH 2 OS=Methylacidiphilum
infernorum (isolate V4) GN=ftsH2 PE=3 SV=1
Length = 641
Score = 296 bits (758), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 210/502 (41%), Positives = 281/502 (55%), Gaps = 42/502 (8%)
Query: 282 RALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKG 341
R S GKSRA+ +S +T VTF D AG E K E+QE+V LK+ ++FQ G PKG
Sbjct: 130 RGAFSFGKSRARLLSGGKTK-VTFKDVAGVEEAKEEVQELVEFLKDPKKFQKLGGRIPKG 188
Query: 342 VLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSI 401
VL+ GPPGTGKTLLAKAIAGEA VPFF+ +G+DFVEMFVGV ASRV+D+F AR AP I
Sbjct: 189 VLMVGPPGTGKTLLAKAIAGEADVPFFSISGSDFVEMFVGVGASRVRDMFEQARRHAPCI 248
Query: 402 IFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDP 461
+FIDEIDA+G R G +GGG EREQ L +L EMDG + S V+VI ATNR D+LDP
Sbjct: 249 VFIDEIDAVGRAR-GTGLGGGHDEREQTLNALLVEMDGIE-SQEGVIVIAATNRKDVLDP 306
Query: 462 ALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAEL 521
ALLR GRFD+ VRV LP GR IL+VHA+ + + K+ L +A T F+GAEL
Sbjct: 307 ALLRPGRFDREVRVNLPDIRGREQILRVHAQ----KIKLSKNADLSALARGTPGFSGAEL 362
Query: 522 QNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAV 581
N++NEA ++ A+K D + Q +L EA + + E S + EE + AY EA
Sbjct: 363 ANLINEAALIAAKKGKDNVDQPDLEEARDKVRWGKE---RRSLAMSEEERKTTAYHEAGH 419
Query: 582 AVLACHLPDPYRPIIETDIKSIRSQPNMRYAEI---SGRVFSRKNDYLNAIVRACAPRVI 638
AVL L + PI + I I P + + S + +RK + L+ + A RV
Sbjct: 420 AVLNVLLEN-TDPIHKVTI--IPRGPALGVTMMLPASDKYNARKKEVLDDLCVAMGGRVA 476
Query: 639 EEQMFGIDNMCWISSKATLD---ASRLAEFLILQTGMT-AFGKAYYRNQSDLVPNLATKL 694
EE G ISS A+ D A+ A ++ + GM+ G +Y + S +V L +L
Sbjct: 477 EEVFLGD-----ISSGASGDIRQATWYARKMVCEWGMSEKLGMVHYADDSSMV-FLGREL 530
Query: 695 EALR--------------DEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWD 740
R +++ A EK ++ E+ VE + LLE + A+++ +
Sbjct: 531 GTSRGYSEATARAIDHEVQHFIQAAYEKAKRIILEHKDKVEALAQALLEYETLNADQVTE 590
Query: 741 IYK--KAPQIPQPAVSPVDEYG 760
I K K P SPV G
Sbjct: 591 IVKTGKMTNPPSKNSSPVSNGG 612
>sp|Q2JNP0|FTSH_SYNJB ATP-dependent zinc metalloprotease FtsH OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=ftsH PE=3 SV=1
Length = 638
Score = 296 bits (758), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 196/475 (41%), Positives = 272/475 (57%), Gaps = 33/475 (6%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
+ GKSRA+ + E T +TF+D AG + K EL E+V LKN E F G P+GVLL
Sbjct: 150 NFGKSRAR-VQMEPKTQITFNDVAGIDQAKLELAEVVDFLKNSERFTALGAKIPRGVLLV 208
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLA+A+AGEAGVPFF+ +G++FVEMFVGV ASRV+DLF A+ AP I+FID
Sbjct: 209 GPPGTGKTLLARAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKQNAPCIVFID 268
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG +GGG EREQ L Q+LTEMDGF+ S ++VI ATNR D+LD ALLR
Sbjct: 269 EIDAVGRQRGA-GLGGGNDEREQTLNQLLTEMDGFE-GNSGIIVIAATNRPDVLDAALLR 326
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V V P GR ILKVHAR K + DV L+++A T FTGA+L N+L
Sbjct: 327 PGRFDRQVTVDRPDFQGRLEILKVHARGKTLSA----DVDLEKLARRTPGFTGADLANLL 382
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA IL AR++L I +E+ +A+ R ++ + E K +AY EA A++
Sbjct: 383 NEAAILAARRNLTEISMDEINDAVDR---VLAGPEKKDRLMSERRKELVAYHEAGHALVG 439
Query: 586 CHLPDPYRPIIETDIKSIRSQPN-----MRYAEISGRVFSRKNDYLNAIVRACAPRVIEE 640
LP+ Y PI + I R Q M + G + + N + A RV EE
Sbjct: 440 SLLPN-YDPIQKVTIIP-RGQAGGLTWFMPSDDDMG--LTTRAHLKNMMTVALGGRVAEE 495
Query: 641 QMFGIDNMCWISSKATLDASRLAEFLILQTGMT------AFGKAYYR----NQSDLVPNL 690
++G + ++ +R+A ++ + GM+ A G+ Y + +
Sbjct: 496 VVYGESEITTGAASDLQQVARIARNMVTRFGMSDRLGNVALGRQYANIFLGREIAAERDF 555
Query: 691 ATKLEALRDEYMRF----AVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDI 741
+ + AL DE +R A ++ ++RE + ++ I L+E I EE+ I
Sbjct: 556 SEETAALIDEEVRRLVNEAYQRATYLIRENRALLDRIARRLVEAETIDGEELQAI 610
>sp|Q8YMZ8|FTSH_NOSS1 ATP-dependent zinc metalloprotease FtsH OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=ftsH PE=3 SV=1
Length = 656
Score = 296 bits (757), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 202/498 (40%), Positives = 274/498 (55%), Gaps = 44/498 (8%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
+ GKSRA+F E TGV FDD AG E K ELQE+V LK E F G PKGVLL
Sbjct: 180 NFGKSRARF-QMEAKTGVKFDDVAGIEEAKEELQEVVTFLKQPERFTAVGARIPKGVLLV 238
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKAIAGEA VPFF+ +G++FVEMFVGV ASRV+DLF A+ AP +IFID
Sbjct: 239 GPPGTGKTLLAKAIAGEAAVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCLIFID 298
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +R G IGGG EREQ L Q+LTEMDGF+ +T +++I ATNR D+LD ALLR
Sbjct: 299 EIDAVGRQR-GTGIGGGNDEREQTLNQLLTEMDGFEGNTG-IIIIAATNRPDVLDSALLR 356
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V V P GR IL+VH+RNK + V L+ IA T FTGA+L N+L
Sbjct: 357 PGRFDRQVIVDAPDLKGRLEILQVHSRNKKV----DPSVSLEAIARRTPGFTGADLANLL 412
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA ILTAR+ + I E+ +A+ R G E + + + K +AY E ++
Sbjct: 413 NEAAILTARRRKEAITILEIDDAVDR----VVAGMEGTPLVDSKSKRLIAYHEVGHGLVG 468
Query: 586 CHLPDPYRPIIE-TDIKSIRSQ------PNMRYAEISGRVFSRKNDYLNAIVRACAPRVI 638
L D + P+ + T I ++Q PN IS ++ I A R
Sbjct: 469 TLLKD-HDPVQKVTLIPRGQAQGLTWFTPNEEQGLIS------RSQLKARITSTLAGRAA 521
Query: 639 EEQMFGIDNMCWISSKATLDASRLAEFLILQTGMTAFGKAYYRNQ-------------SD 685
EE +FG + + + +A ++ + GM+ G NQ SD
Sbjct: 522 EEIVFGKPEVTTGAGDDLQKVTSMARQMVTKFGMSELGPLSLENQSGEVFLGRDWMNKSD 581
Query: 686 LVPNLATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKA 745
+A K+++ E + + +L+ +E + D+L E+ I+ D+++K
Sbjct: 582 YSEEIAAKIDSQVREIINTCYQTSKELLQTNRVVMERLVDLLTEQETIEG----DLFRKI 637
Query: 746 PQIPQPAVSPVDEYGALI 763
Q V VDE +++
Sbjct: 638 VSESQNPV--VDEQLSMV 653
>sp|O78516|FTSH_GUITH ATP-dependent zinc metalloprotease FtsH OS=Guillardia theta GN=ftsH
PE=3 SV=1
Length = 631
Score = 295 bits (756), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 186/484 (38%), Positives = 272/484 (56%), Gaps = 36/484 (7%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
+ GKS+A+F E TGVTF+D AG + K E +E+V LK E F G PKGVLL
Sbjct: 154 NFGKSKARF-QMEAKTGVTFNDVAGVDEAKEEFEEVVSFLKKPERFTAVGAKIPKGVLLV 212
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKAIAGEAGVPFF+ +G++FVEMFVGV ASRV+DLF A+ +P I+FID
Sbjct: 213 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENSPCIVFID 272
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +R G IGGG EREQ L Q+LTEMDGF+ +T +++I ATNR+D+LD ALLR
Sbjct: 273 EIDAVGRQR-GTGIGGGNDEREQTLNQLLTEMDGFEGNTG-IIIIAATNRVDVLDAALLR 330
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V V +P GR IL VHARNK + + L+ IA+ T F+GA+L N+L
Sbjct: 331 PGRFDRQVTVDVPDVKGRLEILNVHARNKKL----DLSISLELIAKRTPGFSGADLANLL 386
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA ILTAR+ I E+ ++ R G E + + K +AY E A++
Sbjct: 387 NEAAILTARRRKKQITISEIDASIDR----VIAGMEGKALVDSKTKRLIAYHEVGHAIIG 442
Query: 586 CHLP--DPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMF 643
L DP + + T + +++ + + ++ L I+ A R EE +F
Sbjct: 443 TLLKHHDPVQKV--TLVPRGQAKGLTWFTPSEDQSLISRSQILARIMGALGGRAAEEVVF 500
Query: 644 GIDNMCWISSKATLDASRLAEFLILQTGMTAFGKAYYRNQ-------------SDLVPNL 690
G+ + + + +A ++ + GM+ G +Q S ++
Sbjct: 501 GLPEVTTGAGNDLQQVTSMARQMVTRFGMSNIGPLSLESQNSDPFLGRTMGSSSQYSEDI 560
Query: 691 ATKLEALRDEYMRFAVEKCAS----VLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
A+++ D +R ++ C + ++++ ++ + D+L+EK I +E I
Sbjct: 561 ASRI----DMQVRAIIQHCHTETVQIIKDNRVVIDKLVDLLIEKETIDGDEFRQIVGDFT 616
Query: 747 QIPQ 750
+P+
Sbjct: 617 SLPE 620
>sp|B8I4B9|FTSH_CLOCE ATP-dependent zinc metalloprotease FtsH OS=Clostridium
cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584
/ H10) GN=ftsH PE=3 SV=1
Length = 619
Score = 295 bits (754), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 200/494 (40%), Positives = 279/494 (56%), Gaps = 51/494 (10%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S GKSRAK ++ ++ +TF++ AG + K EL EIV LK ++F G PKGVLL
Sbjct: 145 SFGKSRAK-MTVDDKKKITFENVAGADEEKEELAEIVEFLKAPKKFVELGARIPKGVLLV 203
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKA++GEAGVPFF+ +G+DFVEMFVGV ASRV+DLF A+ AP I+FID
Sbjct: 204 GPPGTGKTLLAKAVSGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFID 263
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G RG +GGG EREQ L Q+L EMDGF ++ V+++ ATNR DILDPALLR
Sbjct: 264 EIDAVGRHRGA-GLGGGHDEREQTLNQLLVEMDGFGINEG-VIILAATNRPDILDPALLR 321
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V VGLP GR ILKVH+R K DV L ++A +T FTGA+++N+L
Sbjct: 322 PGRFDRRVVVGLPDIKGREQILKVHSRGKPLAD----DVRLDDLARITPGFTGADIENLL 377
Query: 526 NEAGILTARKDLDYIGQEELLE-ALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVL 584
NEA +LTAR + IG EE+ E A K G ++ S + E K AY EA A+
Sbjct: 378 NEAALLTARANKKKIGNEEIKEAAFKVMMGP----EKKSRVMSEHDKKVTAYHEAGHAI- 432
Query: 585 ACHLPDPYRPIIETDI---------KSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAP 635
A L + + I + R Q + Y ++ + I+ A
Sbjct: 433 AIKLVSSSQKVDRVSIIPAGMAGGYTASRPQEDKSY--------HTRSQLIEEIIIALGG 484
Query: 636 RVIEEQMFGIDNMCWISSKATLDASRLAEFLILQTGMT-AFGKAYYRNQSDLV------- 687
R EE +D + +S +++A ++ + GM+ G + N +D V
Sbjct: 485 RAAEE--ITMDEVSTGASSDLKKVNQIARNMVTKYGMSEKLGNMIFGNDNDEVFIGRDLA 542
Query: 688 --PNLATKLEALRDEYMRF----AVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDI 741
N + +L A+ D ++ A +K S+LRE + + ++LLEK +++ E +I
Sbjct: 543 QARNYSDELAAIIDNEVKSIIDNAYQKTVSLLRENIVRLNKLAEVLLEKEKVEGAEFEEI 602
Query: 742 YKKA-----PQIPQ 750
++ A Q PQ
Sbjct: 603 FENAVLEGSSQTPQ 616
>sp|P73179|FTSH1_SYNY3 ATP-dependent zinc metalloprotease FtsH 1 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH1 PE=2 SV=1
Length = 665
Score = 295 bits (754), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 193/485 (39%), Positives = 270/485 (55%), Gaps = 29/485 (5%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S GKS+A+F E TGV FDD AG + K ELQE+V LK E+F G P+GVLL
Sbjct: 192 SFGKSKARF-QMEAKTGVGFDDVAGIDEAKEELQEVVTFLKQPEKFTAIGAKIPRGVLLI 250
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKAIAGEAGVPFF+ +G++FVEMFVGV ASRV+DLF A+ AP ++FID
Sbjct: 251 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLVFID 310
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +R G GGG EREQ L Q+LTEMDGF+ S ++VI ATNR D+LD ALLR
Sbjct: 311 EIDAVGRQR-GVGYGGGNDEREQTLNQLLTEMDGFE-GNSGIIVIAATNRPDVLDLALLR 368
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V V P GR IL +HA+NK E V L IA T FTGA+L N+L
Sbjct: 369 PGRFDRQVTVDYPDVQGRELILAIHAQNKKLHEE----VQLAAIARRTPGFTGADLANVL 424
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA I TAR+ + I E+ +A+ R G E + + + K +AY E A++
Sbjct: 425 NEAAIFTARRRKEAITMAEVNDAIDR----VVAGMEGTPLVDSKSKRLIAYHEVGHALIG 480
Query: 586 CHLP--DPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMF 643
P DP + T I ++Q + + +N + I RV EE +F
Sbjct: 481 TLCPGHDPVEKV--TLIPRGQAQGLTWFTPDEDQSLMTRNQMIARIAGLLGGRVAEEVIF 538
Query: 644 GIDNMCWISSKATLDASRLAEFLILQTGMTAFGKAYY-----RN--------QSDLVPNL 690
G D + + + LA ++ + GM++ G RN +S+ ++
Sbjct: 539 GDDEVTTGAGNDIEKITYLARQMVTKLGMSSLGLVALEEEGDRNFSGGDWGKRSEYSEDI 598
Query: 691 ATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAPQI-P 749
A +++ + A ++ ++ E + ++ + D L+++ I+ E + + Q
Sbjct: 599 AARIDREIQAIVTAAHQRATRIIEENRNLMDLLVDALIDQETIEGEHFRQLVESYQQSQK 658
Query: 750 QPAVS 754
QPA++
Sbjct: 659 QPALA 663
>sp|Q1PDW5|FTSH6_ARATH ATP-dependent zinc metalloprotease FTSH 6, chloroplastic
OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1
Length = 688
Score = 293 bits (750), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 193/471 (40%), Positives = 264/471 (56%), Gaps = 29/471 (6%)
Query: 287 LGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHG 346
LG+S+AKF E TG+TF+D AG + K++ +EIV LK E+F G PKGVLL G
Sbjct: 206 LGRSKAKF-QMEPNTGITFEDVAGVDEAKQDFEEIVEFLKTPEKFSALGAKIPKGVLLTG 264
Query: 347 PPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDE 406
PPGTGKTLLAKAIAGEAGVPFF+ +G++F+EMFVGV ASR +DLF A++ +P I+FIDE
Sbjct: 265 PPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRARDLFNKAKANSPCIVFIDE 324
Query: 407 IDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRK 466
IDA+G R G IGGG EREQ L QILTEMDGF +T V+VI ATNR +ILD ALLR
Sbjct: 325 IDAVGRMR-GTGIGGGNDEREQTLNQILTEMDGFAGNTG-VIVIAATNRPEILDSALLRP 382
Query: 467 GRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILN 526
GRFD+ V VGLP GR ILKVH+R+K +KDV L IA T F+GA+L N++N
Sbjct: 383 GRFDRQVSVGLPDIRGREEILKVHSRSKKL----DKDVSLSVIAMRTPGFSGADLANLMN 438
Query: 527 EAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLAC 586
EA IL R+ D I E+ +++ R G E + I + K +AY E A+ A
Sbjct: 439 EAAILAGRRGKDKITLTEIDDSIDR----IVAGMEGTKMIDGKSKAIVAYHEVGHAICAT 494
Query: 587 HLPDPYRPIIETDIKSIRSQPNMRYAEISGR--VFSRKNDYLNAIVRACAPRVIEEQMFG 644
L + + P+ + + R Q + G K IV R E+ +FG
Sbjct: 495 -LTEGHDPVQKVTLVP-RGQARGLTWFLPGEDPTLVSKQQLFARIVGGLGGRAAEDVIFG 552
Query: 645 IDNMCWISSKATLDASRLAEFLILQTGMTAFGKAYYRN----QSDLV----------PNL 690
+ ++ + +A ++ GM+ G + Q+D+V L
Sbjct: 553 EPEITTGAAGDLQQVTEIARQMVTMFGMSEIGPWALTDPAVKQNDVVLRMLARNSMSEKL 612
Query: 691 ATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDI 741
A +++ + + A E +R A++ + D+LLEK + +E I
Sbjct: 613 AEDIDSCVKKIIGDAYEVAKKHVRNNREAIDKLVDVLLEKETLTGDEFRAI 663
>sp|Q8W585|FTSH8_ARATH ATP-dependent zinc metalloprotease FTSH 8, chloroplastic
OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1
Length = 685
Score = 292 bits (748), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 196/482 (40%), Positives = 263/482 (54%), Gaps = 36/482 (7%)
Query: 287 LGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHG 346
+G+S+AKF E TGVTFDD AG + K++ E+V LK E F G PKGVLL G
Sbjct: 202 IGQSKAKF-QMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVG 260
Query: 347 PPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDE 406
PPGTGKTLLAKAIAGEAGVPFF+ +G++FVEMFVGV ASRV+DLF A+ AP I+F+DE
Sbjct: 261 PPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDE 320
Query: 407 IDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRK 466
IDA+G +R G IGGG EREQ L Q+LTEMDGF+ +T V+V+ ATNR DILD ALLR
Sbjct: 321 IDAVGRQR-GTGIGGGNDEREQTLNQLLTEMDGFEGNTG-VIVVAATNRADILDSALLRP 378
Query: 467 GRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILN 526
GRFD+ V V +P GR ILKVH+ NK F E V L+ IA T F+GA+L N+LN
Sbjct: 379 GRFDRQVSVDVPDVKGRTDILKVHSGNKKF----ESGVSLEVIAMRTPGFSGADLANLLN 434
Query: 527 EAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLAC 586
EA IL R+ I +E+ +++ R G E + + K +AY E A+ C
Sbjct: 435 EAAILAGRRGKTAISSKEIDDSIDR----IVAGMEGTVMTDGKSKSLVAYHEVGHAI--C 488
Query: 587 HLPDPYRPIIE--TDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMFG 644
P ++ T I +++ + K IV R EE +FG
Sbjct: 489 GTLTPGHDAVQKVTLIPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFG 548
Query: 645 IDNMCWISSKATLDASRLAEFLILQTGMTAFG---------------KAYYRN--QSDLV 687
+ + + LA+ ++ GM+ G + RN L
Sbjct: 549 ESEVTTGAVSDLQQITGLAKQMVTTFGMSEIGPWSLMDSSEQSDVIMRMMARNSMSEKLA 608
Query: 688 PNLATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAPQ 747
++ T ++ L D+ A E S +R A++ I +ILLEK + +E I + +
Sbjct: 609 NDIDTAVKTLSDK----AYEIALSQIRNNREAMDKIVEILLEKETMSGDEFRAILSEFTE 664
Query: 748 IP 749
IP
Sbjct: 665 IP 666
>sp|O80860|FTSH2_ARATH ATP-dependent zinc metalloprotease FTSH 2, chloroplastic
OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1
Length = 695
Score = 292 bits (748), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 198/488 (40%), Positives = 265/488 (54%), Gaps = 34/488 (6%)
Query: 277 QPLQRRALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGI 336
PLQ G+S+AKF E TGVTFDD AG + K++ E+V LK E F G
Sbjct: 205 NPLQ------FGQSKAKF-QMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGA 257
Query: 337 YCPKGVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARS 396
PKGVLL GPPGTGKTLLAKAIAGEAGVPFF+ +G++FVEMFVGV ASRV+DLF A+
Sbjct: 258 KIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKE 317
Query: 397 FAPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRL 456
AP I+F+DEIDA+G +R G IGGG EREQ L Q+LTEMDGF+ +T V+V+ ATNR
Sbjct: 318 NAPCIVFVDEIDAVGRQR-GTGIGGGNDEREQTLNQLLTEMDGFEGNTG-VIVVAATNRA 375
Query: 457 DILDPALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDF 516
DILD ALLR GRFD+ V V +P GR ILKVHA NK F + DV L+ IA T F
Sbjct: 376 DILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHAGNKKF----DNDVSLEIIAMRTPGF 431
Query: 517 TGAELQNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAY 576
+GA+L N+LNEA IL R+ I +E+ +++ R G E + + K +AY
Sbjct: 432 SGADLANLLNEAAILAGRRARTSISSKEIDDSIDR----IVAGMEGTVMTDGKSKSLVAY 487
Query: 577 REAAVAVLACHLPDPYRPIIE--TDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACA 634
E AV C P ++ T I +++ + K IV
Sbjct: 488 HEVGHAV--CGTLTPGHDAVQKVTLIPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLG 545
Query: 635 PRVIEEQMFGIDNMCWISSKATLDASRLAEFLILQTGMTAFGKAYYRN---QSDLV---- 687
R EE +FG + + + LA ++ GM+ G + QSD++
Sbjct: 546 GRAAEEIIFGDSEVTTGAVGDLQQITGLARQMVTTFGMSDIGPWSLMDSSAQSDVIMRMM 605
Query: 688 ------PNLATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDI 741
LA +++ + A E S ++ A++ + ++LLEK I +E I
Sbjct: 606 ARNSMSEKLAEDIDSAVKKLSDSAYEIALSHIKNNREAMDKLVEVLLEKETIGGDEFRAI 665
Query: 742 YKKAPQIP 749
+ +IP
Sbjct: 666 LSEFTEIP 673
>sp|A0PXM8|FTSH_CLONN ATP-dependent zinc metalloprotease FtsH OS=Clostridium novyi
(strain NT) GN=ftsH PE=3 SV=1
Length = 676
Score = 290 bits (742), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 199/488 (40%), Positives = 276/488 (56%), Gaps = 44/488 (9%)
Query: 282 RALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKG 341
R + + GKSRAK ++ ++ VTF D AG + K EL+EIV LK +++ + G PKG
Sbjct: 145 RGVMNFGKSRAK-LATPDSQKVTFKDVAGADEEKGELEEIVDFLKEPKKYLDMGARIPKG 203
Query: 342 VLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSI 401
+LL GPPGTGKTLLAKA+AGEAGVPFF+ +G+DFVEMFVGV ASRV+DLF A+ +P I
Sbjct: 204 ILLVGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSPCI 263
Query: 402 IFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDP 461
IFIDEIDA+G +RG +GGG EREQ L Q+L EMDGF V+ +LV ATNR DILD
Sbjct: 264 IFIDEIDAVGRQRGA-GLGGGHDEREQTLNQLLVEMDGFGVNEGIILV-AATNRPDILDK 321
Query: 462 ALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAEL 521
ALLR GRFD+ + VG P GR +LKVH RNK DV L+ +A+ T F GA+L
Sbjct: 322 ALLRPGRFDRQILVGAPDAKGREEVLKVHVRNKRLSD----DVDLKVLAKRTPGFVGADL 377
Query: 522 QNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAV 581
+N++NEA +L R + IG EEL EA+ R ++ S I EE + AY EA
Sbjct: 378 ENLMNEAALLAVRANKKQIGMEELEEAITR---VIAGPEKKSRVIHEEDRKITAYHEAGH 434
Query: 582 AVLACHLPDPYRPIIETDI--KSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIE 639
A++ P P+ E I + + M E S K+ + +V RV E
Sbjct: 435 AIVMKFSPHS-DPVHEISIIPRGMAGGYTMHLPERDTSYMS-KSKLKDEMVGLLGGRVAE 492
Query: 640 EQMFGIDNMCWISSKATLDASR---LAEFLILQTGMT------AFGKAY----------- 679
+ + G IS+ A+ D R +A ++++ GM+ FG +
Sbjct: 493 QIIIG-----DISTGASNDIQRVSNIARKMVMEYGMSEKLGTITFGSDHDEVFIGREIGK 547
Query: 680 YRNQSDLVP-NLATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEI 738
+N S+ V + +++AL DE A +K +L E+ + + +LL+K ++ EE
Sbjct: 548 SKNYSEEVAFEIDNEVKALVDE----AYKKAEKILTEHIDKLHAVAKVLLDKEKVTGEEF 603
Query: 739 WDIYKKAP 746
I + P
Sbjct: 604 NAIVEGRP 611
>sp|D4HA34|FTSH_PROAS ATP-dependent zinc metalloprotease FtsH OS=Propionibacterium acnes
(strain SK137) GN=ftsH PE=3 SV=1
Length = 717
Score = 288 bits (738), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 201/533 (37%), Positives = 273/533 (51%), Gaps = 50/533 (9%)
Query: 289 KSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPP 348
KS+AK + +++T TF D AG + ELQEI L +FQ G PKGVLL+GPP
Sbjct: 151 KSKAK-VGSKDTPKSTFADVAGCQEAIDELQEIREFLAEPAKFQRVGAKIPKGVLLYGPP 209
Query: 349 GTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEID 408
GTGKTLLA+A+AGEAGVPFF+ +G+DFVEMFVGV ASRV+DLF A+ AP+IIFIDEID
Sbjct: 210 GTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKEAAPAIIFIDEID 269
Query: 409 AIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGR 468
A+G RG +GGG EREQ L Q+L EMDGF V V++I ATNR D+LDPALLR GR
Sbjct: 270 AVGRHRGA-GMGGGHDEREQTLNQLLVEMDGFDVHGG-VILIAATNRPDVLDPALLRPGR 327
Query: 469 FDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEA 528
FD+ + V P DGR ILKVHA K DV L IA T TGA+L N+LNEA
Sbjct: 328 FDRQIAVEAPDLDGRLKILKVHAHGKPM----ADDVDLASIARRTPGMTGADLANVLNEA 383
Query: 529 GILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLACHL 588
+LTAR +L IG EL EA+ R Q+ + + + +L AY E A++A +
Sbjct: 384 ALLTARANLPVIGNSELDEAIDR---VIAGPQKKTRLMNQHERLVTAYHEGGHALVAAAM 440
Query: 589 P--DPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMFGID 646
P DP + I T + R+ S + +++ L+++ R EE +F
Sbjct: 441 PGTDPVQKI--TILPRGRALGYTMVMPDSDKYSQTRSELLDSMAYMMGGRAAEELIF--H 496
Query: 647 NMCWISSKATLDASRLAEFLILQTGMTAFGKAYYRNQSDLVPNLATKLEALRD------- 699
+ +S A+++A L+ Q G++A D P L RD
Sbjct: 497 DPSTGASNDIEKATKVARALVTQYGLSARVGTVQLGSGDTEPFLGMTAGQQRDYSDETAK 556
Query: 700 -------EYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYK--------- 743
E + A ++ L ++ + L + + E+ DI+K
Sbjct: 557 IIDDEVRELLENAHQEAFDCLDANREVLDELVRQLFARETLSKAEVADIFKPLKRWPERG 616
Query: 744 -----------KAPQIPQPAVSPVDEYGALIYAGRWGIQGVSLPGRATFAPGN 785
P + P ++ VDE + A R G+ P PG+
Sbjct: 617 AFTGSDKRVPSSIPPVKPPQIAGVDEDAPEVGAPRRGVIAPPTPEPGGDLPGD 669
>sp|C7N1I1|FTSH_SLAHD ATP-dependent zinc metalloprotease FtsH OS=Slackia
heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC
11029 / RHS 1) GN=ftsH PE=3 SV=1
Length = 783
Score = 285 bits (729), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 190/481 (39%), Positives = 272/481 (56%), Gaps = 39/481 (8%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S GK++AK + EE V F D AG++ ELQEI L N ++Q G P+G LL
Sbjct: 266 SFGKAKAK-KTTEERPDVRFSDVAGEDEAVEELQEIKDFLVNPGKYQKLGAKIPRGCLLV 324
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLA+A+AGEA VPFF+ +G++FVEMFVGV ASRV++LF A+ APSIIFID
Sbjct: 325 GPPGTGKTLLARAVAGEANVPFFSISGSEFVEMFVGVGASRVRNLFEQAKEAAPSIIFID 384
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +R G +GGG EREQ L Q+L EMDGF+ + + V++I ATNR+D+LDPALLR
Sbjct: 385 EIDAVGRQR-GTGLGGGHDEREQTLNQLLVEMDGFEKNDA-VVLIAATNRVDVLDPALLR 442
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ + V P GR IL+VHA+NK +DV L+ IA+LT TGA+L N++
Sbjct: 443 PGRFDRQIVVDGPDVKGRVKILEVHAKNKPIG----EDVDLERIAKLTSGMTGADLMNLM 498
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLR-LAYREAAVAVL 584
NEA +LTAR++ D IG +E+ E+++R G E T + E R +AY E+ A L
Sbjct: 499 NEAALLTARRNKDKIGMDEVNESMER----LMAGPERKTRVLNEKTRRTIAYHESGHA-L 553
Query: 585 ACHLPDPYRPIIETDI--KSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQM 642
H+ + P+ + I + + M + + SR + L+ + RV EE
Sbjct: 554 VGHMLENADPVHKITIVPRGMALGYTMSIPDEDKFLVSR-SAMLDELAVFMGGRVAEEIF 612
Query: 643 FGIDNMCWISSKATLDASRLAEFLILQTGMT------AFGKAY--------YRNQSDLVP 688
G ++ +S A++ A +++ GM+ FG+ Y N D P
Sbjct: 613 CG--DITTGASNDLERATKTARKMVVSYGMSEALGQQTFGQPNHEVFLGRDYGNTQDYSP 670
Query: 689 NLATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEE-------IWDI 741
A +++ M+ A + +L + T+ +LLE+ + EE WD
Sbjct: 671 ETAQRIDEEVARLMKEAHDTAYEILSARQEQMHTMAKVLLERETVDGEECQALLNNTWDE 730
Query: 742 Y 742
+
Sbjct: 731 F 731
>sp|A0LN68|FTSH_SYNFM ATP-dependent zinc metalloprotease FtsH OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=ftsH PE=3 SV=1
Length = 647
Score = 284 bits (727), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 226/647 (34%), Positives = 338/647 (52%), Gaps = 72/647 (11%)
Query: 124 RLKGTELD-----PENSHR-IDFSDFWKLLNSNSVQYME-YSNYGQTVSVILPYYKDAKV 176
RL+G+ D P+ S R + FS ++ +L + +M+ Y Q+ + Y + K
Sbjct: 18 RLRGSPGDGGPGRPDPSQRKVHFSIWYFILALLLIVWMQTYMGEQQSEKI---SYSEFKQ 74
Query: 177 EGKEGNPGKDIIYRRHVVDRM-----PIDCWNDVWQKLHQQVVNVDVVNVNTVSAEVYSS 231
+GN +I + M P +N + + + V ++ N+ S +V +
Sbjct: 75 RVHDGNVQNLVIEHDRITGTMKENDGPGRRFNTIRVEDPELVKQLEAKNIR-FSGDVQNP 133
Query: 232 VATAVIWSMRLALAVGLYIWIDNIMRPIYAKLIPCDLGTPPQKTRQPLQRRALGSLGKSR 291
+ W + L A+ ++ W +MR +G PQ + S+GK+R
Sbjct: 134 WLGLITWWL-LPFAIMIFFW-SFLMR---------RMGGGPQ---------GVLSVGKAR 173
Query: 292 AKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTG 351
K + +E T +TFDD AG + K EL+EIV+ LK+ +FQ G PKGVLL G PGTG
Sbjct: 174 VKIFAEKEIT-ITFDDVAGIDEAKGELEEIVQFLKDPGKFQRLGGRIPKGVLLVGAPGTG 232
Query: 352 KTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIG 411
KTLLAKA+AGEAGVPFF+ +G++FVEMFVGV A+RV+DLF A+ AP IIFIDE+DA+G
Sbjct: 233 KTLLAKAVAGEAGVPFFSMSGSEFVEMFVGVGAARVRDLFGQAKDHAPCIIFIDELDALG 292
Query: 412 SKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDK 471
RG I GG EREQ L Q+L EMDGF S V+++ ATNR +ILDPALLR GRFD+
Sbjct: 293 KARGLNPI-GGHDEREQTLNQLLVEMDGFD-PRSGVIIMAATNRPEILDPALLRPGRFDR 350
Query: 472 IVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILNEAGIL 531
V + P GR AIL+VH + SE V L++IA +T F GA+L N++NEA ++
Sbjct: 351 HVAIDKPDIRGREAILRVHVKEVKLGSE----VDLKKIAGMTPGFVGADLANLVNEAALV 406
Query: 532 TARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLACHLPDP 591
AR+D D + + EA R G E +++ P+E ++ +AY EA A++A LP+
Sbjct: 407 AARRDRDEVTMADFQEAADRIIGGLE--KKNRAMNPKEKEI-VAYHEAGHALVAMLLPN- 462
Query: 592 YRPIIETDI--KSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMFGIDNMC 649
P+ + I + I + + R +N+ L+ + RV EE +FG
Sbjct: 463 VDPVNKVSIIPRGIAALGYTQQLPTEDRYLMTRNELLDRLQVLLGGRVSEEIIFGD---- 518
Query: 650 WISSKATLDASR---LAEFLILQTGMTA-FGKAYY--------------RNQSDLVPNLA 691
+S+ A D R +A ++++ GM+ G Y + D +A
Sbjct: 519 -VSTGAQNDLQRATDIARSMVMEYGMSERLGPLTYTRDPRSAHLDLGLGSRERDYSEMIA 577
Query: 692 TKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEI 738
+++ + A EK + L+ +E + ILLEK I EE+
Sbjct: 578 QEIDEEITRIVEDAHEKVRATLKRERGCLEKLAKILLEKESIDGEEL 624
>sp|P46469|FTSH_LACLA ATP-dependent zinc metalloprotease FtsH OS=Lactococcus lactis
subsp. lactis (strain IL1403) GN=ftsH PE=3 SV=1
Length = 695
Score = 284 bits (726), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 189/496 (38%), Positives = 274/496 (55%), Gaps = 50/496 (10%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S GKSRAK + T+ V F D AG E K+EL E+V LKN +++ + G P GVLL
Sbjct: 174 SFGKSRAKQQDGK-TSKVRFADVAGSEEEKQELVEVVDFLKNPKKYHDLGARIPAGVLLE 232
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKA+AGEAGVPF++ +G+DFVEMFVGV ASRV+DLF +A+ APSIIFID
Sbjct: 233 GPPGTGKTLLAKAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFENAKKTAPSIIFID 292
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG +GGG EREQ L Q+L EMDGF+ + V+VI ATNR D+LDPALLR
Sbjct: 293 EIDAVGRQRGA-GLGGGNDEREQTLNQLLVEMDGFQDDGNSVIVIAATNRSDVLDPALLR 351
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V VG P GR A+LKVHA+NK S DV L +A T + GA+L+N+L
Sbjct: 352 PGRFDRKVLVGAPDVKGREAVLKVHAKNKPLAS----DVDLHNVATQTPGYVGADLENVL 407
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA ++ AR++ I ++ E + R ++D E ++ +AY EA A++
Sbjct: 408 NEAALVAARQNKKEINAADIDEGMDRAMAG--PAKKDRIQSMREREI-VAYHEAGHAIVG 464
Query: 586 CHLPDPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYL---------NAIVRACAPR 636
L + + ++ + P R I G + + ++ + + + R
Sbjct: 465 LVLENG------STVRKVTVVPRGR---IGGYMLALPDEEIMQPTNFHLQDQLASLMGGR 515
Query: 637 VIEEQMFGIDNMCWISSKATLDASRLAEFLILQTGMT-AFGKAYYRNQSDLV-----PNL 690
+ EE +FG+ +S A+ +A ++ + GM+ G Y +
Sbjct: 516 LGEEIVFGV--ATPGASNDIEKATHIARSMVTEYGMSKKLGMVSYEGDHQVFIGRDYGQT 573
Query: 691 ATKLEA----LRDEYMRF---AVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYK 743
T EA + DE R A ++ + + + I + LL+ + A++I ++K
Sbjct: 574 KTYSEATAVMIDDEVRRILGEAYDRAKEAIETHREQHKAIAEALLKYETLDAKQIMSLFK 633
Query: 744 K--------APQIPQP 751
A ++P+P
Sbjct: 634 TGKMPDEAAAAEVPEP 649
>sp|Q9WZ49|FTSH_THEMA ATP-dependent zinc metalloprotease FtsH OS=Thermotoga maritima
(strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
GN=ftsH PE=1 SV=1
Length = 610
Score = 282 bits (721), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 185/472 (39%), Positives = 265/472 (56%), Gaps = 34/472 (7%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
+ KSRA VTF D G E EL+E+V LK+ +F G PKG+LL
Sbjct: 141 TFTKSRATMYKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLV 200
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLA+A+AGEA VPFF +G+DFVE+FVGV A+RV+DLFA A++ AP I+FID
Sbjct: 201 GPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFAQAKAHAPCIVFID 260
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G RG +GGG EREQ L Q+L EMDGF S ++V+ ATNR DILDPALLR
Sbjct: 261 EIDAVGRHRGA-GLGGGHDEREQTLNQLLVEMDGFD-SKEGIIVMAATNRPDILDPALLR 318
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFDK + V P GR IL++H RNK +DV L+ IA+ T F GA+L+N++
Sbjct: 319 PGRFDKKIVVDPPDMLGRKKILEIHTRNKPL----AEDVNLEIIAKRTPGFVGADLENLV 374
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA +L AR+ D I ++ EA+ R S I + K +AY EA AV++
Sbjct: 375 NEAALLAAREGRDKITMKDFEEAIDR---VIAGPARKSKLISPKEKRIIAYHEAGHAVVS 431
Query: 586 CHLPDPYRPIIETDI--KSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMF 643
+P+ P+ I + ++ + + +N+ L+ + R EE +F
Sbjct: 432 TVVPNG-EPVHRISIIPRGYKALGYTLHLPEEDKYLVSRNELLDKLTALLGGRAAEEVVF 490
Query: 644 GIDNMCWISSKATLD---ASRLAEFLILQTGMT------AFGK----AYYRNQSDLVPNL 690
G ++S A D A+ +A ++ Q GM+ A+GK + + + N
Sbjct: 491 GD-----VTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKEEQEVFLGKEITRLRNY 545
Query: 691 ATKLEALRDEYMRFAVEKC----ASVLREYHSAVETITDILLEKGEIKAEEI 738
+ ++ + DE ++ V C ++R+Y ++ I +ILLEK I+ +E+
Sbjct: 546 SEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDEL 597
>sp|Q7UUZ7|FTSH1_RHOBA ATP-dependent zinc metalloprotease FtsH 1 OS=Rhodopirellula baltica
(strain SH1) GN=ftsH1 PE=3 SV=1
Length = 672
Score = 280 bits (716), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 190/481 (39%), Positives = 265/481 (55%), Gaps = 45/481 (9%)
Query: 284 LGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVL 343
L KS AK A + +TF+D AG E +K +LQEIV LK E+FQ G PKGVL
Sbjct: 176 LSGFSKSPAKRFEATDKV-ITFNDVAGLEGVKADLQEIVDFLKTPEKFQKLGGQVPKGVL 234
Query: 344 LHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIF 403
L+GPPGTGKTLLA+A+AGEA VPFF+ NG++F++MFVGV ASRV+DLF +A+ +PSIIF
Sbjct: 235 LNGPPGTGKTLLARAVAGEADVPFFSVNGSEFIQMFVGVGASRVRDLFKTAKEQSPSIIF 294
Query: 404 IDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPAL 463
IDEIDA+G +RG +GGG EREQ L QIL EMDGF V+VI ATNR D+LDPAL
Sbjct: 295 IDEIDAVGRQRGA-GLGGGHDEREQTLNQILGEMDGFG-GAQAVIVIAATNRPDVLDPAL 352
Query: 464 LRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQN 523
LR GRFD+ V VG P+ GR I KVH R+ DV L +A T TGA+++N
Sbjct: 353 LRPGRFDRHVTVGRPTMKGREEIFKVHVRDVPLGD----DVDLHRLAAGTVGLTGADIRN 408
Query: 524 ILNEAGILTAR--------KDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLA 575
++NEA + AR D DY ++++L KR++ E+ +E + A
Sbjct: 409 MVNEAALWAARGDKKIVEMSDFDY-ARDKILMGAKREEVLLESEKE-----------KTA 456
Query: 576 YREAAVAVLACHLPDPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAP 635
Y EA + A HL + T I R+ +Y R+ K + + ++
Sbjct: 457 YHEAGHTLTAWHLEGSHIVHKVTIIPRGRALGVTQYVPNEDRLSMSKRELEHQLIVLLGG 516
Query: 636 RVIEEQMFGIDNMCWISSKATLDASRLAEFLILQTGMT-AFGKAYYRNQSDLVPNLATKL 694
R E+ ++ C + A+ +A ++ GM+ G Y+ SD P L ++
Sbjct: 517 RAAEKIIY--TETCVGAENDLERATSIARRMVTHWGMSPKIGPVSYKT-SDEDPFLGREI 573
Query: 695 -----------EALRDEYMRFAVE---KCASVLREYHSAVETITDILLEKGEIKAEEIWD 740
E + +E R +E K +LRE+ +ETIT LL++ E+ E+ +
Sbjct: 574 HQQRQFSEHTQELIDEEVARILMEADQKAEQLLREHRGQLETITRELLDREELNEAELTE 633
Query: 741 I 741
+
Sbjct: 634 L 634
>sp|C7MC16|FTSH_BRAFD ATP-dependent zinc metalloprotease FtsH OS=Brachybacterium faecium
(strain ATCC 43885 / DSM 4810 / NCIB 9860) GN=ftsH PE=3
SV=1
Length = 704
Score = 280 bits (715), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 183/477 (38%), Positives = 263/477 (55%), Gaps = 26/477 (5%)
Query: 287 LGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHG 346
GKS+AK + +E VTF D AG + EL EI + L + +Q G PKGVLL+G
Sbjct: 159 FGKSKAKLFN-KEAPKVTFADVAGADEAVEELDEIKQFLVDPGRYQAVGAKIPKGVLLYG 217
Query: 347 PPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDE 406
PPGTGKTLLAKA+AGEA VPF++ +G+DFVEMFVGV ASRV+DLF +A+ AP+IIFIDE
Sbjct: 218 PPGTGKTLLAKAVAGEANVPFYSISGSDFVEMFVGVGASRVRDLFNTAKENAPAIIFIDE 277
Query: 407 IDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRK 466
IDA+G RG +GGG EREQ L Q+L EMDGF+ V++I ATNR+DILDPALLR
Sbjct: 278 IDAVGRHRGA-GMGGGHDEREQTLNQMLVEMDGFE-ENQNVILIAATNRVDILDPALLRP 335
Query: 467 GRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILN 526
GRFD+ + V P GR IL VHA+ K DV L+ +A+ +GA+L N+LN
Sbjct: 336 GRFDRQIGVEAPDLKGRLHILGVHAKGKPL----AHDVDLEAVAKRAIGMSGADLANVLN 391
Query: 527 EAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLAC 586
EA +LTAR I L EA+ R Q S + E + AY E A++A
Sbjct: 392 EAALLTARSGNQIIDNRALDEAIDR---VSMGPQRYSKVMTERERQMTAYHEGGHALVAA 448
Query: 587 HLPDPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMFGID 646
+ + T + R+ R + +N+ L+ + A +EE +F
Sbjct: 449 AMNNSAPVTKVTILPRGRAGGYTMVVPTQDRNYQSRNELLDRLAYAMGGYAVEESIF--H 506
Query: 647 NMCWISSKATLDASRLAEFLILQTGMTA-FGKAYYRNQSDLV---------PNLATKLEA 696
++ S +A+++A +++Q GM+ G+ + D V P + + +
Sbjct: 507 DVTTGPSSDLQNATKIARTMVMQLGMSGTVGQVALSGEQDEVFVGMQQGQAPRFSAETAS 566
Query: 697 LRDEYMRF----AVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAPQIP 749
L D+ +R A+++ SV+ E ++ + + LLEK + E+ I++ + P
Sbjct: 567 LVDQEVRTLLDNALDEAWSVIVENRHVLDRLVEELLEKETLNERELAQIFRDVKKQP 623
>sp|C7N914|FTSH_LEPBD ATP-dependent zinc metalloprotease FtsH OS=Leptotrichia buccalis
(strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249)
GN=ftsH PE=3 SV=1
Length = 768
Score = 280 bits (715), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 163/311 (52%), Positives = 202/311 (64%), Gaps = 12/311 (3%)
Query: 287 LGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHG 346
GKSR I ++ V FDD AG + K EL+E+V LKN E++ G PKGVLL G
Sbjct: 181 FGKSRVNKI--DKKPDVKFDDVAGVDGAKEELREVVDFLKNPEKYTKAGARVPKGVLLLG 238
Query: 347 PPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDE 406
PGTGKTLLAKA+AGE+G FF+ +G++FVEMFVGV ASRV+DLF A+ +PSIIFIDE
Sbjct: 239 RPGTGKTLLAKAVAGESGASFFSISGSEFVEMFVGVGASRVRDLFEKAKESSPSIIFIDE 298
Query: 407 IDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRK 466
IDAIG +R G EREQ L Q+L EMDGF+ T +V+V+ ATNR D+LDPALLR
Sbjct: 299 IDAIGRRRSVGKNSGSNDEREQTLNQLLVEMDGFETDT-KVIVLAATNREDVLDPALLRA 357
Query: 467 GRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNILN 526
GRFD+ V V P GR AILKVH+RNK +DV L++IA++T F GA+L N+LN
Sbjct: 358 GRFDRRVTVDAPDLQGRIAILKVHSRNKKL----ARDVKLEDIAKITPGFVGADLANLLN 413
Query: 527 EAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLAC 586
EA IL AR+ D I +L EA+ K GQ+ PEE KL LAY EA A++
Sbjct: 414 EAAILAARRASDTIKMADLDEAV--DKIGMGLGQKGKIIKPEEKKL-LAYHEAGHAIMTE 470
Query: 587 HLP--DPYRPI 595
P DP +
Sbjct: 471 LTPGADPVHKV 481
>sp|D5HA94|FTSH2_SALRM ATP-dependent zinc metalloprotease FtsH 2 OS=Salinibacter ruber
(strain M8) GN=ftsH2 PE=3 SV=1
Length = 683
Score = 279 bits (714), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 183/489 (37%), Positives = 268/489 (54%), Gaps = 44/489 (8%)
Query: 276 RQPLQRRALGSLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKG 335
R Q + L S+ +S+A+ +E TFDD AG + K EL+EI++ LKN + F+ G
Sbjct: 159 RMQSQGQGLFSVRQSKAELYDKDEED-TTFDDVAGADSAKEELREIIKFLKNPKRFEGLG 217
Query: 336 IYCPKGVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASAR 395
PKGVLL GPPGTGKTLLA+A+AGEA PFF+ +G+DF+EMFVGV ASRV+D+F+ A+
Sbjct: 218 GKVPKGVLLVGPPGTGKTLLARAVAGEANAPFFSVSGSDFMEMFVGVGASRVRDMFSEAK 277
Query: 396 SFAPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNR 455
+P+IIFIDE+D+IG KRG +GGG EREQ L Q+L+E+DGF+ V+V+ ATNR
Sbjct: 278 ETSPAIIFIDELDSIGRKRGAG-LGGGNDEREQTLNQLLSELDGFE-ENEGVIVMAATNR 335
Query: 456 LDILDPALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTED 515
DILD AL R GRFD+ + V LP+K R ILK+HAR K DV L+EIA T
Sbjct: 336 PDILDSALTRPGRFDRQITVDLPTKQSRHEILKIHAREKPLSD----DVDLEEIARSTPG 391
Query: 516 FTGAELQNILNEAGILTARKDLDYI-------GQEELLEALKRQKGTFETGQEDSTDIPE 568
F+GA+L+N+LNEA +L R D I +++++ LKR D + +
Sbjct: 392 FSGADLENLLNEAALLAGRHGHDAIQYSDIEQARDKVMMGLKR----------DGMVLDD 441
Query: 569 ELKLRLAYREAAVAVLACHLP--DPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYL 626
E K LAY EA A++ LP DP + T + ++ + + R + L
Sbjct: 442 EEKKLLAYHEAGHAIVGAVLPNADPVHKV--TIVPRGKAMGVTQQLPEKDQYLYRHDYIL 499
Query: 627 NAIVRACAPRVIEEQMFGIDNMCWISSKATLDASRLAEFLILQTGMTAFGKAYYRNQSDL 686
+ + R EE +F D + ++A ++L GM K +
Sbjct: 500 DRLAVIMGGRAAEELIF--DTATSGAENDLKQVRKMARKMVLDWGMGDQFKHISLGEDQG 557
Query: 687 VPNLATKLEALR----------DEYMRF----AVEKCASVLREYHSAVETITDILLEKGE 732
L ++ R DE +R A ++ L E+H A + + D+L+E+ E
Sbjct: 558 NVFLGDEIAKGREYSDDTAREVDEEIRRISEDAFQRAVDTLNEHHEAFDQLADMLIEQEE 617
Query: 733 IKAEEIWDI 741
+ +++ ++
Sbjct: 618 VSGKDVLNL 626
>sp|A6TWP7|FTSH2_ALKMQ ATP-dependent zinc metalloprotease FtsH 2 OS=Alkaliphilus
metalliredigens (strain QYMF) GN=ftsH2 PE=3 SV=1
Length = 689
Score = 278 bits (712), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 175/393 (44%), Positives = 237/393 (60%), Gaps = 21/393 (5%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S GKS+AK +E +TFDD AG + K E++E+V LKN +++ G PKG+L+
Sbjct: 145 SFGKSKAKLHKDDEGKRITFDDVAGLDEEKAEVEELVDFLKNPKKYIELGARIPKGILMI 204
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKT L KA+AGEAGVPFF+ +G+DFVEMFVGV ASRV+DLF A+ AP IIFID
Sbjct: 205 GPPGTGKTYLTKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKSAPCIIFID 264
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G KRG +GGG EREQ L Q+L EMDGF ++ ++++ ATNR DILDPALLR
Sbjct: 265 EIDAVGRKRGA-GLGGGHDEREQTLNQLLVEMDGFGINEG-IIIVAATNRPDILDPALLR 322
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V VG P GR IL+VHA+ K ++DV L+ +A T FT A+++N++
Sbjct: 323 PGRFDRQVMVGAPDIKGREQILQVHAKGKPL----DEDVNLKVLARRTPGFTPADIENLM 378
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA +LTARK+ I E + EA+ + E + S I E+ + AY EA AV+A
Sbjct: 379 NEAALLTARKNEKKIKMETVEEAITKVIAGLE---KKSRVISEKERKLTAYHEAGHAVVA 435
Query: 586 CHL--PDPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMF 643
L DP + T I R+ + + K + IV RV E+ +
Sbjct: 436 KLLTHTDPVHQV--TIIPRGRAGGFTMTLPTEDKYYVTKTEMQEHIVHLLGGRVAEKLV- 492
Query: 644 GIDNMCWISSKATLDASR---LAEFLILQTGMT 673
+ IS+ A+ D R +A ++ Q GM+
Sbjct: 493 ----LHDISTGASNDLQRVSSIARAMVTQYGMS 521
>sp|P37476|FTSH_BACSU ATP-dependent zinc metalloprotease FtsH OS=Bacillus subtilis
(strain 168) GN=ftsH PE=1 SV=1
Length = 637
Score = 278 bits (712), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 190/474 (40%), Positives = 267/474 (56%), Gaps = 39/474 (8%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
+ GKS+AK + EE V F D AG + K+EL E+V LK+ +F G PKGVLL
Sbjct: 142 NFGKSKAKLYT-EEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELGARIPKGVLLV 200
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKA AGEAGVPFF+ +G+DFVEMFVGV ASRV+DLF +A+ AP +IFID
Sbjct: 201 GPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFID 260
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG +GGG EREQ L Q+L EMDGF + +++I ATNR DILDPALLR
Sbjct: 261 EIDAVGRQRGA-GLGGGHDEREQTLNQLLVEMDGFSANEG-IIIIAATNRADILDPALLR 318
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ + V P GR A+LKVHARNK ++ V L+ IA T F+GA+L+N+L
Sbjct: 319 PGRFDRQITVDRPDVIGREAVLKVHARNKPL----DETVNLKSIAMRTPGFSGADLENLL 374
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA ++ AR++ I ++ EA R + S I ++ + +AY E V+
Sbjct: 375 NEAALVAARQNKKKIDARDIDEATDR---VIAGPAKKSRVISKKERNIVAYHEGGHTVIG 431
Query: 586 CHLPDPYRPIIETDIKSIRSQPNMRYAEI---SGRVFSRKNDYLNAIVRACAPRVIEEQM 642
L + ++ R Q YA + R F K + L+ IV RV EE +
Sbjct: 432 LVLDEA--DMVHKVTIVPRGQAGG-YAVMLPREDRYFQTKPELLDKIVGLLGGRVAEEII 488
Query: 643 FGIDNMCWISSKATLD---ASRLAEFLILQTGMT------AFGKAY---------YRNQS 684
FG +S+ A D A+ +A ++ + GM+ FG++ + N+
Sbjct: 489 FG-----EVSTGAHNDFQRATNIARRMVTEFGMSEKLGPLQFGQSQGGQVFLGRDFNNEQ 543
Query: 685 DLVPNLATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEI 738
+ +A +++ ++ E+ +L E +E I LL+ + AE+I
Sbjct: 544 NYSDQIAYEIDQEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLDAEQI 597
>sp|P94304|FTSH_BACPE ATP-dependent zinc metalloprotease FtsH OS=Bacillus pseudofirmus
(strain OF4) GN=ftsH PE=3 SV=2
Length = 679
Score = 278 bits (710), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 182/471 (38%), Positives = 265/471 (56%), Gaps = 33/471 (7%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
+ GKS+AK ++ E+ F D AG + K+EL E+V LK+ +F G PKGVLL
Sbjct: 147 NFGKSKAKMVN-EDKKKAKFKDVAGADEEKQELVEVVEFLKDPRKFSAIGARIPKGVLLV 205
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLA+A+AGEAGVPFF+ +G+DFVEMFVGV ASRV+DLF +A+ AP IIFID
Sbjct: 206 GPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFID 265
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG +GGG EREQ L Q+L EMDGF + +++I ATNR DILDPALLR
Sbjct: 266 EIDAVGRQRGA-GLGGGHDEREQTLNQLLVEMDGFSANEG-IIIIAATNRADILDPALLR 323
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ ++V P +GR +LKVHARNK DV L+ IA T F+GA+L+N+L
Sbjct: 324 PGRFDRQIQVNRPDVNGREEVLKVHARNKPLND----DVNLKTIATRTPGFSGADLENLL 379
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA ++ AR D I + EA+ R ++ P+E K+ +A+ EA V+
Sbjct: 380 NEAALVAARHDHTKISMIHIEEAIDRVIAG--PAKKSRVISPKEKKI-VAWHEAGHTVVG 436
Query: 586 CHLPDPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMFGI 645
L + T + + R F + + L+ I+ RV EE FG
Sbjct: 437 VKLENADMVHKVTIVPRGMAGGYAVMLPKEDRYFMTQPELLDKIIGLLGGRVAEEVTFG- 495
Query: 646 DNMCWISSKATLD---ASRLAEFLILQTGMT-----------AFGKAYY----RNQSDLV 687
+S+ A D A+ +A ++ + GM+ + G+ + +N+ +
Sbjct: 496 ----EVSTGAHNDFQRATGIARKMVTEYGMSEKLGPMQFISGSGGQVFLGRDIQNEQNYS 551
Query: 688 PNLATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEI 738
+A +++ ++ +C +L E +++ + LL+ + AE+I
Sbjct: 552 DAIAHEIDLEVQRIIKECYARCKQILLENKDSLDLVAKTLLDMETLDAEQI 602
>sp|B8G4Q6|FTSH_CHLAD ATP-dependent zinc metalloprotease FtsH OS=Chloroflexus aggregans
(strain MD-66 / DSM 9485) GN=ftsH PE=3 SV=1
Length = 656
Score = 277 bits (708), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 183/457 (40%), Positives = 263/457 (57%), Gaps = 34/457 (7%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S GKSRA+ + ++ T +TF D AGQE K++L EIV LK ++F G P+GVL+
Sbjct: 150 SFGKSRARMFAGDKPT-ITFADVAGQEEAKQDLAEIVEFLKFPDKFAALGARIPRGVLMV 208
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLL++A+AGEAGVPFF+ +G++FVEMFVGV ASRV+DLF A+ AP I+FID
Sbjct: 209 GPPGTGKTLLSRAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKRNAPCIVFID 268
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG +GG EREQ L QIL EMDGF +T+ V+VI ATNR D+LDPAL+R
Sbjct: 269 EIDAVGRQRGA-GLGGSHDEREQTLNQILVEMDGFDTNTN-VIVIAATNRPDVLDPALVR 326
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V + P GR ILKVH + K +DV L+ +A T F+GA+L N++
Sbjct: 327 PGRFDRQVVLDAPDVRGRIEILKVHVKGKPL----AEDVNLEILARQTPGFSGADLMNVV 382
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA IL AR+ I E +A++R + S + + KL +AY EA A++
Sbjct: 383 NEAAILAARRSKRKISMAEFQDAVERV--AIGGPERRSRVMTDRQKLVVAYHEAGHAIVG 440
Query: 586 CHLPDPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNA---------IVRACAPR 636
LP + ++ + P + + +F D LN + + R
Sbjct: 441 AALPKADK------VQKVTIIPRGQAGGYT--LFLPDEDSLNLRTVSQFKARLAVSLGGR 492
Query: 637 VIEEQMFGIDNMCWISSKATLDASRLAEFLILQTGMTA-FGKAYYRNQSDLVPNLATKLE 695
V EE +FG + + +S + +R+A ++ + GM+ G + + +L+ L ++
Sbjct: 493 VAEEIVFGNEEVTTGASGDLVQVTRIARAMVTRYGMSQRLGPIVFGEKEELI-FLGREIS 551
Query: 696 ALR---DEYMRFAVEKCASVLREYHSAVETITDILLE 729
R DE R E+ +++ E A ET ILL+
Sbjct: 552 EQRNYGDEVARQIDEEVHAIVSE---AYETAQQILLQ 585
>sp|P49825|FTSH_ODOSI ATP-dependent zinc metalloprotease FtsH OS=Odontella sinensis
GN=ftsH PE=3 SV=1
Length = 644
Score = 276 bits (707), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 183/495 (36%), Positives = 262/495 (52%), Gaps = 39/495 (7%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
SLGKS A+F TGV+F D AG + K E +EIV LK +++ G PKG+LL
Sbjct: 167 SLGKSTARF-ERRPDTGVSFKDIAGIDEAKTEFEEIVSFLKEPDKYTIVGAKIPKGILLV 225
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKAIA EA VPFF+ G++FVEMF+G+ A+RV+DLF A AP I+FID
Sbjct: 226 GPPGTGKTLLAKAIANEADVPFFSVAGSEFVEMFIGIGAARVRDLFKKASENAPCIVFID 285
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG +GGG EREQ L Q+LTEMDGFK V+V+GATNR DILD ALLR
Sbjct: 286 EIDAVGRERGA-GVGGGNDEREQTLNQLLTEMDGFK-ENKGVIVVGATNRADILDAALLR 343
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V V LP + GR ILKVHARNK +DV L ++A T F+GA+L N+L
Sbjct: 344 PGRFDRQVTVNLPDRLGRVGILKVHARNKPLG----EDVSLVQLANRTPGFSGADLANLL 399
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETG-QEDSTDIPEELKLRLAYREAAVAVL 584
NEA IL R I + E+ EA R G ED+ + K +AY E A+
Sbjct: 400 NEAAILATRYKKSSITKNEVNEAADRIIGGIAGAPMEDTKN-----KRLIAYHEVGHAIT 454
Query: 585 ACHLPDPYRPIIETDIKSIRSQPNMRYAEIS------GRVFSRKNDYLNAIVRACAPRVI 638
L +++ I P ++ + ++ L I+ R
Sbjct: 455 GSVLKS------HDEVEKITLTPRGGAKGLTWFTPEEDQSLLSRSALLARIITTLGGRAA 508
Query: 639 EEQMFGIDNMCWISSKATLDASRLAEFLILQTGMTAFGKAYYRNQ--------------S 684
E+ +FG + +S + LA ++ + GM+ G ++ S
Sbjct: 509 EQVIFGEPEVTTGASSDLQQVTNLARQMVTRFGMSNIGPLALEDESTGQVFLGGNMASGS 568
Query: 685 DLVPNLATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKK 744
+ N+A +++ + + + EK ++ + ++ I + LL+K + +E ++
Sbjct: 569 EYAENIADRIDDEVRKIITYCYEKAIEIVLDNRVVIDLIVEKLLDKETMDGDEFRELLST 628
Query: 745 APQIPQPAVSPVDEY 759
+P + V ++
Sbjct: 629 YTILPNKNIPYVSKF 643
>sp|B4U7U4|FTSH_HYDS0 ATP-dependent zinc metalloprotease FtsH OS=Hydrogenobaculum sp.
(strain Y04AAS1) GN=ftsH PE=3 SV=1
Length = 636
Score = 276 bits (707), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 189/474 (39%), Positives = 262/474 (55%), Gaps = 35/474 (7%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S GKS+AK + EE V D+ AG + +K E+ E++ LK+ F+ G PKG+L +
Sbjct: 144 SFGKSKAK-VYIEEKPNVKLDNVAGMDEVKEEVAEVIEYLKDPARFRKLGGRPPKGILFY 202
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
G PG GKTLLAKA+AGEA VPF + +G+DFVEMFVGV A+R++D F +AR AP I+FID
Sbjct: 203 GEPGVGKTLLAKALAGEAHVPFISVSGSDFVEMFVGVGAARMRDTFETARKNAPCIVFID 262
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G RG ++GG EREQ L Q+L EMDGF S +L+I ATNR DILDPALLR
Sbjct: 263 EIDAVGRSRGAINLGGND-EREQTLNQLLVEMDGFDTSEG-ILIIAATNRPDILDPALLR 320
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ + + P GR+ ILKVHA+NK KDV L+ IA T FTGA+L+NIL
Sbjct: 321 PGRFDRQIFIPKPDVKGRYEILKVHAKNKPL----AKDVDLELIARATPGFTGADLENIL 376
Query: 526 NEAGILTARKDLDYIGQEELLEALKR-QKGTFETGQEDSTDIPEELKLRLAYREAAVAVL 584
NEA +L ARK D I E+L EA+ R G G S P+E K ++A EA A++
Sbjct: 377 NEAALLAARKRKDLIHMEDLEEAIDRVMMGLERRGMAIS---PKE-KEKIAVHEAGHALM 432
Query: 585 ACHLPDPYRPIIETDI------KSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVI 638
+PD P+ + I + +Q I + K D L+ I R
Sbjct: 433 GLMMPDA-DPLHKVSIIPRGMALGVTTQ-----LPIDDKHIYDKADLLSRIHILMGGRCA 486
Query: 639 EEQMFGIDNMCWISSKATLDASRLAEFLILQTGMTA-FGKAYYRNQ----------SDLV 687
EE +G D + + A+ LA ++ GM+ G R ++
Sbjct: 487 EEVFYGKDGITTGAENDLQRATDLAYRIVATWGMSENVGPISVRRNINPFLGGSTVTEGS 546
Query: 688 PNLATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDI 741
P+L +++ + + A E+ V+ E A+ ++ L+EK I +E +I
Sbjct: 547 PDLLKEIDKEVQKLLASAYEETKRVIAENKEALSSVVKRLIEKETIDCKEFVEI 600
>sp|B8D065|FTSH_HALOH ATP-dependent zinc metalloprotease FtsH OS=Halothermothrix orenii
(strain H 168 / OCM 544 / DSM 9562) GN=ftsH PE=3 SV=1
Length = 630
Score = 276 bits (706), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 187/481 (38%), Positives = 266/481 (55%), Gaps = 38/481 (7%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S GKSRA+ +E VTF+D A E +K ELQE+V LKN ++F G PKGVLL
Sbjct: 145 SFGKSRARL--SENGKKVTFEDVANYEEVKEELQEVVEFLKNPDKFTRMGAKVPKGVLLV 202
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLA+A+AGEAGVPFF +G+DFVEMFVGV ASRV+DLF + AP IIFID
Sbjct: 203 GPPGTGKTLLARAVAGEAGVPFFIISGSDFVEMFVGVGASRVRDLFEQGKKNAPCIIFID 262
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
E+DA+G +RG +GGG EREQ L Q+L EMDGF+ ++V+ ATNR D+LDPALLR
Sbjct: 263 ELDAVGRQRGA-GLGGGHDEREQTLNQLLVEMDGFE-PNEGIIVMAATNRPDVLDPALLR 320
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V V P GR ILK+H RNK DV ++ +A+ T FTGA+++N+
Sbjct: 321 PGRFDRQVVVDKPDVKGRMGILKIHLRNKPVAD----DVDVEVLAKRTPGFTGADMENLA 376
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA IL R+ + I E+ +A+ + + S + E + +AY E A++
Sbjct: 377 NEAAILAVRRRKNKITMEDFDDAIDK---VIAGPAKKSKVMSERERKLVAYHETGHALVG 433
Query: 586 CHLPDPYRPIIETDIKSIRSQPNMRYA-EISGRVFSRKNDYLNAIVRACAPRVIEEQMFG 644
L R + + R+ MR+A + F K + L+ I R E +F
Sbjct: 434 DLLEHADRTHKISIVPRGRAG-GMRWALPKEDKNFMSKQELLDQITVLLGGRA-SESIFL 491
Query: 645 IDNMCWISSKATLD---ASRLAEFLILQTGMTA----------------FGKAYYRNQSD 685
D IS+ A D A++LA ++ + GM+ G+ R Q +
Sbjct: 492 ED----ISTGAQNDLERATKLARAMVTEYGMSEKLGPLTLGHKHDEQIFLGRDISR-QRN 546
Query: 686 LVPNLATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKA 745
+A +++ + + ++ +L+E + VE I LL++ + AE++ + K
Sbjct: 547 YSEEIAAEIDKEVSSIIEYCYQRAEKILQENTAKVERIVRELLDRETLDAEQLQKLIKGE 606
Query: 746 P 746
P
Sbjct: 607 P 607
>sp|B8H444|FTSH_CAUCN ATP-dependent zinc metalloprotease FtsH OS=Caulobacter crescentus
(strain NA1000 / CB15N) GN=ftsH PE=2 SV=1
Length = 626
Score = 276 bits (706), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 184/485 (37%), Positives = 270/485 (55%), Gaps = 28/485 (5%)
Query: 279 LQRRALGSLG--KSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGI 336
+Q A G++G KS+A+ ++ E +TF+D AG + K ELQE+V LK+ +FQ G
Sbjct: 123 MQGGAKGAMGFGKSKARLLT-ENKNRITFEDVAGVDEAKEELQEVVDFLKDPAKFQRLGG 181
Query: 337 YCPKGVLLHGPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARS 396
PKG LL GPPGTGKTL+A+A+AGEAGVPFF +G+DFVEMFVGV ASRV+D+F A+
Sbjct: 182 KIPKGALLVGPPGTGKTLIARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKK 241
Query: 397 FAPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRL 456
AP IIFIDEIDA+G RG +GGG EREQ L Q+L EMDGF+ + +++I ATNR
Sbjct: 242 NAPCIIFIDEIDAVGRHRGA-GLGGGNDEREQTLNQLLVEMDGFE-ANEGIILIAATNRP 299
Query: 457 DILDPALLRKGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDF 516
D+LDPALLR GRFD+ V V P GR I++VH +N + DV ++ +A T F
Sbjct: 300 DVLDPALLRPGRFDRQVVVPNPDVAGREKIIRVHMKNVPLAA----DVDVKTLARGTPGF 355
Query: 517 TGAELQNILNEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAY 576
+GA+L N++NEA ++ ARK+ + ++ +A + + S + EE K AY
Sbjct: 356 SGADLANLVNEAALMAARKNRRMVTMQDFEQAKDK---VMMGAERRSMAMNEEEKKLTAY 412
Query: 577 REAAVAVLACHLPDPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNA-IVRACAP 635
E A++A ++P P+ + I M G +S K + + +
Sbjct: 413 HEGGHAIVALNVP-LADPVHKATIVPRGRALGMVMQLPEGDRYSMKYQQMTSRLAIMMGG 471
Query: 636 RVIEEQMFGIDNMCWISSKATLDASRLAEFLILQTGMT-AFGKAYYRNQSDLV------- 687
RV EE +FG +N+ +S A+ LA ++ + G + G Y + D V
Sbjct: 472 RVAEEIIFGKENITSGASSDIKAATDLARNMVTRWGYSDILGTVAYGDNQDEVFLGHSVA 531
Query: 688 --PNLATKLEALRDE----YMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDI 741
N++ + L D +++ +++ +L + + T+ LLE + EEI DI
Sbjct: 532 RTQNVSEETARLIDSEVKRLVQYGLDEARRILTDKIDDLHTLGKALLEYETLSGEEIADI 591
Query: 742 YKKAP 746
K P
Sbjct: 592 LKGIP 596
>sp|B9L3S8|FTSH2_THERP ATP-dependent zinc metalloprotease FtsH 2 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH2 PE=3 SV=1
Length = 699
Score = 276 bits (705), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 183/478 (38%), Positives = 266/478 (55%), Gaps = 33/478 (6%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S G+SRA+ E VTF D AG+E K EL ++V LKN ++ G P+GVLL
Sbjct: 232 SFGRSRARVYDVERPQ-VTFADVAGEEEAKAELAQVVDFLKNPAKYHRIGARLPRGVLLV 290
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLA+A+AGEAGVPFF+ + ++FVEMFVGV ASRV+DLF A++ APSIIFID
Sbjct: 291 GPPGTGKTLLARAVAGEAGVPFFSVSASEFVEMFVGVGASRVRDLFERAKAQAPSIIFID 350
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
E+DA+G +R +G G EREQ L Q+L EMDGF+ T V+VI ATNR D+LDPALLR
Sbjct: 351 ELDAVGRQRFA-GLGVGNDEREQTLNQLLVEMDGFEAHTD-VVVIAATNRPDVLDPALLR 408
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V VGLP K GR AIL++H R DV L+ +A T F+GA+L N++
Sbjct: 409 PGRFDRQVVVGLPDKRGRAAILRIHTRGIPI----APDVDLEGLAAATPGFSGADLANLV 464
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA ++ AR+ + + + EAL + G S + +E + +AY EA AV+A
Sbjct: 465 NEAALVAARRGKQVVDRSDFEEALDK----MLLGTTRSLLMSQEERRLVAYHEAGHAVVA 520
Query: 586 CHLP--DPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMF 643
P DP R I + + R+ A R +N L + R E+ +F
Sbjct: 521 YFTPGADPLRKI--SIVPRGRALGVTVQAPEEDRFNYTRNQLLGRLAVLLGGRAAEQLVF 578
Query: 644 GIDNMCWISSKATLDASRLAEFLILQTGMTA---------------FGKAYYRNQSDLVP 688
+ + +A++LA ++ GM+ G+ ++ S
Sbjct: 579 --HEVTTGAQNDLKEATQLARRMVGLWGMSEELGPIYLGLGEQHVFLGREIVQDHSIGTS 636
Query: 689 NLATKLEALRDEYMRFAVEKCASVLREYHSAVETITDILLEKGEIKAEEIWDIYKKAP 746
L +A++ + A+E+ +LRE+ ++ + D+L+ + + E+I ++ + P
Sbjct: 637 TLDRADQAVQ-RLLNEAMERAERILREHREELDRLADLLIAEETVGPEKIREVLGEQP 693
>sp|Q67WJ2|FTSH6_ORYSJ ATP-dependent zinc metalloprotease FTSH 6, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH6 PE=3 SV=1
Length = 686
Score = 275 bits (702), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 193/475 (40%), Positives = 264/475 (55%), Gaps = 27/475 (5%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
LGKS+AKF E TGVTFDD AG + K++ QEIV+ LK E+F G PKGVLL
Sbjct: 202 GLGKSKAKF-QMEPKTGVTFDDVAGVDEAKQDFQEIVQFLKFPEKFTAVGARTPKGVLLV 260
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKAIAGEAGVPFF+ +G++F+EMFVGV ASRV+DLF A++ AP ++FID
Sbjct: 261 GPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFDRAKASAPCLVFID 320
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +RG IGGG EREQ L Q+LTEMDGF V+VI ATNR +ILD ALLR
Sbjct: 321 EIDAVGRQRGA-GIGGGNDEREQTLNQLLTEMDGFGGGDGGVVVIAATNRPEILDAALLR 379
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V VGLP GR IL VH NK + V L +A T F+GA+L N++
Sbjct: 380 PGRFDRRVSVGLPDVRGREEILLVHGANKRL----DPGVSLAVVAMRTPGFSGADLANLM 435
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA IL R+ D I E+ +++ R G E ++ + K+ +AY E AV A
Sbjct: 436 NEAAILAGRRGKDRITVSEIDDSIDR----IVAGLEGTSMTDGKSKMLVAYHEIGHAVCA 491
Query: 586 CHLP--DPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMF 643
D + + R E + SR+ + IV R EE +F
Sbjct: 492 TLTAGHDEVQKVTLIPRGQARGLTWFLPGEEDPALVSRQQIFAG-IVGGLGGRAAEEVVF 550
Query: 644 GIDNMCWISSKATLDASRLAEFLILQTGMTAFGKAYYRNQS----DLV------PNLATK 693
G + ++ +R+A ++ GM+ G + D+V +++ +
Sbjct: 551 GEPEVTTGAAGDLQQVTRVARRMVTAFGMSEIGPWALAEPAAQGGDVVLRMLARSSMSER 610
Query: 694 LEALRDEYMRFAVEKCASV----LREYHSAVETITDILLEKGEIKAEEIWDIYKK 744
L A D +R V++ V +R +A++ + D+L+EK + +E I +
Sbjct: 611 LAADIDAAVRTIVDEAYEVAKAHVRRNRAAIDQLVDVLMEKETLGGDEFRAILSE 665
>sp|O69076|FTSH_STRPN ATP-dependent zinc metalloprotease FtsH OS=Streptococcus pneumoniae
serotype 4 (strain ATCC BAA-334 / TIGR4) GN=ftsH PE=3
SV=3
Length = 652
Score = 275 bits (702), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 171/388 (44%), Positives = 232/388 (59%), Gaps = 12/388 (3%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S G+S+AK + E+ V F D AG E K+EL E+V LK+ + F G P GVLL
Sbjct: 168 SFGRSKAKAANKEDIK-VRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLE 226
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKA+AGEAGVPFF+ +G+DFVEMFVGV ASRV+ LF A+ AP+IIFID
Sbjct: 227 GPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFID 286
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +R G +GGG EREQ L Q+L EMDGF+ ++VI ATNR D+LDPALLR
Sbjct: 287 EIDAVGRQR-GVGLGGGNDEREQTLNQLLIEMDGFE-GNEGIIVIAATNRSDVLDPALLR 344
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V VG P GR AILKVHA+NK +DV L+ +A+ T F GA+L+N+L
Sbjct: 345 PGRFDRKVLVGRPDVKGREAILKVHAKNKPLA----EDVDLKLVAQQTPGFVGADLENVL 400
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA ++ AR++ I ++ EA R ++D T +E +L +AY EA ++
Sbjct: 401 NEAALVAARRNKSIIDASDIDEAEDRVIAG--PSKKDKTVSQKEREL-VAYHEAGHTIVG 457
Query: 586 CHLPDPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMFGI 645
L + T + R+ M ++ K D + RV EE +F +
Sbjct: 458 LVLSNARVVHKVTIVPRGRAGGYMIALPKEDQMLLSKEDMKEQLAGLMGGRVAEEIIFNV 517
Query: 646 DNMCWISSKATLDASRLAEFLILQTGMT 673
+S A+++A ++ + GM+
Sbjct: 518 QTTG--ASNDFEQATQMARAMVTEYGMS 543
>sp|P59652|FTSH_STRR6 ATP-dependent zinc metalloprotease FtsH OS=Streptococcus pneumoniae
(strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1
Length = 652
Score = 275 bits (702), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 171/388 (44%), Positives = 232/388 (59%), Gaps = 12/388 (3%)
Query: 286 SLGKSRAKFISAEETTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLH 345
S G+S+AK + E+ V F D AG E K+EL E+V LK+ + F G P GVLL
Sbjct: 168 SFGRSKAKAANKEDIK-VRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLE 226
Query: 346 GPPGTGKTLLAKAIAGEAGVPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFID 405
GPPGTGKTLLAKA+AGEAGVPFF+ +G+DFVEMFVGV ASRV+ LF A+ AP+IIFID
Sbjct: 227 GPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFID 286
Query: 406 EIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLR 465
EIDA+G +R G +GGG EREQ L Q+L EMDGF+ ++VI ATNR D+LDPALLR
Sbjct: 287 EIDAVGRQR-GVGLGGGNDEREQTLNQLLIEMDGFE-GNEGIIVIAATNRSDVLDPALLR 344
Query: 466 KGRFDKIVRVGLPSKDGRFAILKVHARNKYFRSEEEKDVLLQEIAELTEDFTGAELQNIL 525
GRFD+ V VG P GR AILKVHA+NK +DV L+ +A+ T F GA+L+N+L
Sbjct: 345 PGRFDRKVLVGRPDVKGREAILKVHAKNKPLA----EDVDLKLVAQQTPGFVGADLENVL 400
Query: 526 NEAGILTARKDLDYIGQEELLEALKRQKGTFETGQEDSTDIPEELKLRLAYREAAVAVLA 585
NEA ++ AR++ I ++ EA R ++D T +E +L +AY EA ++
Sbjct: 401 NEAALVAARRNKSIIDASDIDEAEDRVIAG--PSKKDKTVSQKEREL-VAYHEAGHTIVG 457
Query: 586 CHLPDPYRPIIETDIKSIRSQPNMRYAEISGRVFSRKNDYLNAIVRACAPRVIEEQMFGI 645
L + T + R+ M ++ K D + RV EE +F +
Sbjct: 458 LVLSNARVVHKVTIVPRGRAGGYMIALPKEDQMLLSKEDMKEQLAGLMGGRVAEEIIFNV 517
Query: 646 DNMCWISSKATLDASRLAEFLILQTGMT 673
+S A+++A ++ + GM+
Sbjct: 518 QTTG--ASNDFEQATQMARAMVTEYGMS 543
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 311,462,932
Number of Sequences: 539616
Number of extensions: 13665646
Number of successful extensions: 57884
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2290
Number of HSP's successfully gapped in prelim test: 563
Number of HSP's that attempted gapping in prelim test: 52126
Number of HSP's gapped (non-prelim): 3770
length of query: 845
length of database: 191,569,459
effective HSP length: 126
effective length of query: 719
effective length of database: 123,577,843
effective search space: 88852469117
effective search space used: 88852469117
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)