Query 043053
Match_columns 1058
No_of_seqs 949 out of 6961
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 21:46:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043053.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043053hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 2.8E-76 9.7E-81 739.6 25.7 616 2-625 52-752 (768)
2 3rgz_A Protein brassinosteroid 100.0 5.5E-70 1.9E-74 682.7 20.0 568 15-589 91-739 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 6.5E-62 2.2E-66 604.6 26.3 585 27-618 7-627 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 4.3E-62 1.5E-66 606.2 24.3 590 3-602 12-635 (680)
5 3j0a_A TOLL-like receptor 5; m 100.0 1.5E-55 5.3E-60 557.6 34.1 530 28-600 8-570 (844)
6 3t6q_A CD180 antigen; protein- 100.0 2.6E-56 8.7E-61 546.7 24.2 541 26-602 14-572 (606)
7 3t6q_A CD180 antigen; protein- 100.0 2.2E-55 7.5E-60 538.5 25.4 505 3-520 20-562 (606)
8 3vq2_A TLR4, TOLL-like recepto 100.0 1.1E-55 3.7E-60 541.1 22.1 539 26-604 13-572 (606)
9 3j0a_A TOLL-like receptor 5; m 100.0 4.3E-54 1.5E-58 544.4 34.1 526 51-618 7-565 (844)
10 3vq2_A TLR4, TOLL-like recepto 100.0 5E-54 1.7E-58 526.4 19.6 499 2-519 18-559 (606)
11 4gt4_A Tyrosine-protein kinase 100.0 1.2E-51 4E-56 452.8 20.7 258 704-987 26-304 (308)
12 3omv_A RAF proto-oncogene seri 100.0 4.4E-51 1.5E-55 445.8 24.4 263 704-990 36-301 (307)
13 4asz_A BDNF/NT-3 growth factor 100.0 1.5E-51 5.1E-56 450.0 20.3 260 704-990 13-290 (299)
14 4aoj_A High affinity nerve gro 100.0 5.1E-51 1.7E-55 452.2 24.2 261 704-991 41-321 (329)
15 4b9d_A Serine/threonine-protei 100.0 1.4E-51 4.9E-56 455.7 17.9 254 704-984 24-278 (350)
16 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.4E-50 1.2E-54 437.1 18.9 253 704-983 32-285 (311)
17 4fih_A Serine/threonine-protei 100.0 6.7E-50 2.3E-54 441.6 19.5 250 704-983 74-324 (346)
18 4g3f_A NF-kappa-beta-inducing 100.0 9E-50 3.1E-54 439.4 18.6 256 703-990 57-317 (336)
19 2z63_A TOLL-like receptor 4, v 100.0 9.8E-50 3.3E-54 484.9 20.4 534 26-617 9-560 (570)
20 3fpq_A Serine/threonine-protei 100.0 2.8E-49 9.4E-54 428.5 20.2 250 706-983 28-283 (290)
21 2z63_A TOLL-like receptor 4, v 100.0 1.1E-49 3.9E-54 484.3 18.9 506 2-524 14-537 (570)
22 4ase_A Vascular endothelial gr 100.0 4.4E-49 1.5E-53 440.0 19.7 262 704-990 64-348 (353)
23 3hyh_A Carbon catabolite-derep 100.0 7.3E-49 2.5E-53 421.2 19.2 252 702-984 11-264 (275)
24 4fie_A Serine/threonine-protei 100.0 9.9E-49 3.4E-53 442.9 21.2 250 704-983 151-401 (423)
25 4eco_A Uncharacterized protein 100.0 9.9E-49 3.4E-53 478.8 21.6 452 48-519 81-601 (636)
26 3hmm_A TGF-beta receptor type- 100.0 1.6E-48 5.6E-53 429.5 21.1 269 704-990 3-298 (303)
27 3ubd_A Ribosomal protein S6 ki 100.0 1.3E-48 4.3E-53 425.2 15.3 250 704-983 24-282 (304)
28 4eco_A Uncharacterized protein 100.0 6.6E-49 2.3E-53 480.3 13.6 454 24-497 81-603 (636)
29 2z81_A CD282 antigen, TOLL-lik 100.0 3.7E-48 1.3E-52 468.6 18.8 482 26-522 7-514 (549)
30 4g31_A Eukaryotic translation 100.0 2E-47 6.7E-52 418.4 20.0 254 702-983 3-280 (299)
31 2z81_A CD282 antigen, TOLL-lik 100.0 9.6E-48 3.3E-52 464.9 19.0 491 47-596 4-516 (549)
32 4ecn_A Leucine-rich repeat pro 100.0 8.8E-47 3E-51 467.8 22.1 435 48-522 323-822 (876)
33 2z7x_B TOLL-like receptor 1, v 100.0 6.1E-47 2.1E-51 454.4 16.1 455 27-522 3-485 (520)
34 4ecn_A Leucine-rich repeat pro 100.0 3.2E-46 1.1E-50 462.8 18.7 444 145-617 323-870 (876)
35 2z7x_B TOLL-like receptor 1, v 100.0 1.5E-46 5E-51 451.1 14.4 450 5-495 5-482 (520)
36 4g8a_A TOLL-like receptor 4; l 100.0 4E-45 1.4E-49 450.5 21.1 536 28-602 35-592 (635)
37 4b99_A Mitogen-activated prote 100.0 1.5E-44 5E-49 410.8 21.1 264 704-984 54-346 (398)
38 4f9c_A Cell division cycle 7-r 100.0 3.2E-44 1.1E-48 403.9 20.1 200 702-922 19-251 (361)
39 3v5w_A G-protein coupled recep 100.0 1E-43 3.4E-48 419.0 20.6 256 704-984 189-451 (689)
40 4g8a_A TOLL-like receptor 4; l 100.0 1.5E-43 5.3E-48 436.3 22.2 540 39-617 19-584 (635)
41 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1E-43 3.5E-48 429.9 17.0 458 24-522 31-514 (562)
42 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 9.2E-44 3.1E-48 430.4 15.1 458 123-598 34-518 (562)
43 3uto_A Twitchin; kinase, muscl 100.0 8.8E-43 3E-47 416.4 22.4 256 701-984 154-412 (573)
44 2qkw_B Protein kinase; three-h 100.0 6E-41 2E-45 375.7 24.6 274 701-990 36-316 (321)
45 2psq_A Fibroblast growth facto 100.0 1.3E-40 4.3E-45 379.6 25.4 261 704-990 81-365 (370)
46 3p86_A Serine/threonine-protei 100.0 1.6E-40 5.3E-45 369.3 22.7 260 704-990 37-299 (309)
47 3soc_A Activin receptor type-2 100.0 8.8E-41 3E-45 374.1 20.4 269 704-990 24-319 (322)
48 3fxz_A Serine/threonine-protei 100.0 1.2E-40 3.9E-45 368.4 20.9 251 703-983 19-270 (297)
49 3tki_A Serine/threonine-protei 100.0 8.2E-41 2.8E-45 374.1 19.6 256 703-984 6-263 (323)
50 3uim_A Brassinosteroid insensi 100.0 1.2E-40 4.2E-45 374.1 21.1 273 702-987 28-309 (326)
51 3zgw_A Maternal embryonic leuc 100.0 3.7E-41 1.2E-45 378.8 16.3 257 700-986 6-264 (347)
52 3s95_A LIMK-1, LIM domain kina 100.0 1.9E-40 6.6E-45 369.6 22.0 259 704-992 10-285 (310)
53 3v47_A TOLL-like receptor 5B a 100.0 1.7E-40 6E-45 391.4 22.6 373 134-523 22-413 (455)
54 1jl5_A Outer protein YOPM; leu 100.0 1.4E-40 4.7E-45 388.7 21.5 362 46-495 9-371 (454)
55 1jl5_A Outer protein YOPM; leu 100.0 1.2E-40 4E-45 389.4 20.4 283 22-351 9-291 (454)
56 3cbl_A C-FES, proto-oncogene t 100.0 1.2E-40 4.2E-45 381.2 19.2 260 704-990 114-375 (377)
57 2izr_A Casein kinase I isoform 100.0 9.9E-41 3.4E-45 375.4 18.0 262 704-991 9-283 (330)
58 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.9E-40 1.3E-44 359.0 22.0 258 704-991 8-266 (268)
59 3fe3_A MAP/microtubule affinit 100.0 2.6E-40 8.9E-45 369.9 20.2 249 704-983 15-265 (328)
60 3kul_A Ephrin type-A receptor 100.0 6E-40 2.1E-44 367.5 22.8 262 704-992 49-316 (325)
61 4eqm_A Protein kinase; transfe 100.0 3.3E-40 1.1E-44 364.3 20.0 264 704-991 11-277 (294)
62 4hcu_A Tyrosine-protein kinase 100.0 5.7E-40 1.9E-44 357.9 21.5 257 704-990 10-267 (269)
63 2yab_A Death-associated protei 100.0 7.6E-40 2.6E-44 370.5 23.3 260 702-984 10-274 (361)
64 3lb7_A RAF proto-oncogene seri 100.0 1.4E-39 4.8E-44 361.4 25.0 264 704-991 36-302 (307)
65 3v47_A TOLL-like receptor 5B a 100.0 2.9E-40 9.9E-45 389.5 20.4 382 27-473 13-411 (455)
66 1o6l_A RAC-beta serine/threoni 100.0 1.4E-39 4.9E-44 364.8 23.1 253 704-985 5-263 (337)
67 3l9p_A Anaplastic lymphoma kin 100.0 4.6E-40 1.6E-44 374.7 19.2 263 704-992 71-348 (367)
68 4euu_A Serine/threonine-protei 100.0 1.9E-39 6.6E-44 363.0 23.9 269 704-990 9-310 (319)
69 3vhe_A Vascular endothelial gr 100.0 4.8E-40 1.7E-44 374.7 19.2 263 703-990 21-356 (359)
70 2ivs_A Proto-oncogene tyrosine 100.0 1.5E-39 5.3E-44 363.2 22.8 261 704-990 23-312 (314)
71 3soa_A Calcium/calmodulin-depe 100.0 1.6E-39 5.5E-44 377.5 23.5 259 700-984 7-269 (444)
72 3q4u_A Activin receptor type-1 100.0 1.4E-39 4.8E-44 361.2 21.9 262 703-987 7-300 (301)
73 3poz_A Epidermal growth factor 100.0 8.1E-40 2.8E-44 367.2 20.2 261 704-992 15-281 (327)
74 2y0a_A Death-associated protei 100.0 1.3E-39 4.6E-44 364.9 21.6 261 701-984 8-273 (326)
75 3gen_A Tyrosine-protein kinase 100.0 1.2E-39 4.3E-44 358.1 20.9 257 704-990 24-281 (283)
76 1luf_A Muscle-specific tyrosin 100.0 1.1E-39 3.6E-44 369.4 20.9 263 704-992 47-338 (343)
77 3tt0_A Basic fibroblast growth 100.0 2.1E-39 7.1E-44 371.9 23.6 262 704-991 69-354 (382)
78 1tki_A Titin; serine kinase, m 100.0 9.1E-40 3.1E-44 365.0 19.3 255 703-986 4-261 (321)
79 2nru_A Interleukin-1 receptor- 100.0 4.1E-39 1.4E-43 358.4 24.2 274 701-989 22-306 (307)
80 3kex_A Receptor tyrosine-prote 100.0 8.3E-40 2.8E-44 366.9 18.6 261 704-992 13-279 (325)
81 2qol_A Ephrin receptor; recept 100.0 1.8E-39 6.3E-44 370.2 21.7 261 704-991 45-311 (373)
82 3c0i_A Peripheral plasma membr 100.0 2.1E-39 7.2E-44 367.1 21.9 262 702-985 22-289 (351)
83 2bdw_A Hypothetical protein K1 100.0 2.1E-39 7.2E-44 368.1 21.5 258 701-985 26-287 (362)
84 3h4j_B AMPK kdaid, SNF1-like p 100.0 7.2E-40 2.5E-44 366.8 17.4 252 704-986 9-262 (336)
85 1csn_A Casein kinase-1; phosph 100.0 2.4E-39 8.2E-44 358.7 21.0 263 704-991 10-285 (298)
86 4dc2_A Protein kinase C IOTA t 100.0 1.3E-39 4.6E-44 371.5 19.5 257 703-983 51-319 (396)
87 3niz_A Rhodanese family protei 100.0 6E-39 2E-43 357.2 23.9 266 701-983 18-301 (311)
88 4aw2_A Serine/threonine-protei 100.0 1.5E-39 5.1E-44 376.2 19.6 260 704-985 74-341 (437)
89 2i1m_A Macrophage colony-stimu 100.0 1.5E-39 5.2E-44 366.4 19.2 265 703-992 45-329 (333)
90 1rjb_A FL cytokine receptor; k 100.0 2.5E-39 8.6E-44 366.4 21.0 264 703-991 44-336 (344)
91 3ugc_A Tyrosine-protein kinase 100.0 2.7E-39 9.1E-44 357.7 20.2 265 704-990 10-292 (295)
92 1k9a_A Carboxyl-terminal SRC k 100.0 8E-39 2.7E-43 374.6 25.3 252 704-990 193-446 (450)
93 3o0g_A Cell division protein k 100.0 3.1E-39 1.1E-43 356.6 20.5 261 704-983 2-283 (292)
94 1mp8_A Focal adhesion kinase 1 100.0 5.2E-39 1.8E-43 352.6 22.1 259 704-991 15-278 (281)
95 1opk_A P150, C-ABL, proto-onco 100.0 2.9E-39 9.9E-44 382.5 21.5 259 704-991 220-480 (495)
96 1t46_A HOMO sapiens V-KIT hard 100.0 4.6E-39 1.6E-43 359.2 21.5 262 704-990 23-308 (313)
97 2zv2_A Calcium/calmodulin-depe 100.0 4.1E-39 1.4E-43 356.7 20.9 260 704-983 13-293 (298)
98 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.2E-39 4E-44 368.1 16.6 253 703-984 22-282 (353)
99 2c30_A Serine/threonine-protei 100.0 6.1E-39 2.1E-43 358.7 22.3 252 705-986 46-298 (321)
100 4fr4_A YANK1, serine/threonine 100.0 6E-39 2.1E-43 364.9 22.5 253 704-983 15-272 (384)
101 2pvf_A Fibroblast growth facto 100.0 8E-39 2.7E-43 360.4 23.0 262 704-991 35-320 (334)
102 3og7_A AKAP9-BRAF fusion prote 100.0 5.8E-39 2E-43 353.8 21.4 262 704-989 24-288 (289)
103 3qd2_B Eukaryotic translation 100.0 3.9E-39 1.3E-43 363.0 20.4 255 701-983 3-326 (332)
104 1ob3_A PFPK5, cell division co 100.0 2.9E-39 1E-43 355.9 18.9 260 704-983 2-281 (288)
105 3kfa_A Tyrosine-protein kinase 100.0 6E-39 2.1E-43 353.6 21.3 263 704-995 13-277 (288)
106 1fot_A TPK1 delta, CAMP-depend 100.0 4E-39 1.4E-43 358.6 20.1 249 704-984 6-260 (318)
107 1qcf_A Haematopoetic cell kina 100.0 2.4E-39 8.4E-44 379.7 19.2 257 704-990 188-445 (454)
108 3ork_A Serine/threonine protei 100.0 1.5E-39 5E-44 362.5 16.2 258 703-983 11-274 (311)
109 3kmu_A ILK, integrin-linked ki 100.0 5.5E-39 1.9E-43 350.5 20.3 254 704-989 10-270 (271)
110 1kob_A Twitchin; kinase, intra 100.0 4.6E-39 1.6E-43 367.4 20.5 256 701-984 48-306 (387)
111 3lzb_A Epidermal growth factor 100.0 4.6E-39 1.6E-43 360.7 20.0 263 704-994 15-283 (327)
112 2pmi_A Negative RE, cyclin-dep 100.0 5.6E-39 1.9E-43 358.6 20.6 263 703-983 4-294 (317)
113 3gni_B Strad alpha; kinase fol 100.0 4.4E-39 1.5E-43 370.6 20.2 207 704-922 25-241 (389)
114 2eva_A TAK1 kinase - TAB1 chim 100.0 1E-38 3.6E-43 354.7 22.5 256 704-991 8-265 (307)
115 3qup_A Tyrosine-protein kinase 100.0 7.6E-39 2.6E-43 359.0 21.5 262 704-990 23-299 (323)
116 4f0f_A Serine/threonine-protei 100.0 1E-38 3.5E-43 351.5 21.6 259 704-987 19-287 (287)
117 3dtc_A Mitogen-activated prote 100.0 5.7E-39 1.9E-43 350.4 19.3 257 704-987 7-271 (271)
118 2yex_A Serine/threonine-protei 100.0 1.2E-38 4.2E-43 348.8 22.0 257 701-983 4-262 (276)
119 3t9t_A Tyrosine-protein kinase 100.0 9.7E-39 3.3E-43 347.7 21.1 257 704-990 8-265 (267)
120 1xjd_A Protein kinase C, theta 100.0 2.5E-39 8.6E-44 363.8 16.8 252 703-983 16-270 (345)
121 2wqm_A Serine/threonine-protei 100.0 1.3E-38 4.3E-43 355.0 22.2 270 702-994 30-302 (310)
122 3dbq_A Dual specificity protei 100.0 3.8E-39 1.3E-43 364.3 18.1 256 704-986 9-277 (343)
123 3a8x_A Protein kinase C IOTA t 100.0 6.3E-39 2.2E-43 361.4 19.7 256 704-983 9-276 (345)
124 2qr7_A Ribosomal protein S6 ki 100.0 4.3E-39 1.5E-43 362.3 18.2 256 701-986 19-281 (342)
125 4eut_A Serine/threonine-protei 100.0 1E-38 3.4E-43 367.9 21.7 269 704-990 9-310 (396)
126 3uc3_A Serine/threonine-protei 100.0 6E-39 2.1E-43 364.4 19.4 255 704-986 20-278 (361)
127 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.1E-38 3.6E-43 360.1 21.1 249 704-984 41-295 (350)
128 3ttj_A Mitogen-activated prote 100.0 6.6E-39 2.3E-43 375.6 20.2 261 703-984 61-357 (464)
129 1nxk_A MAP kinase-activated pr 100.0 7.4E-39 2.5E-43 368.5 20.1 257 701-987 58-326 (400)
130 2acx_A G protein-coupled recep 100.0 5.8E-39 2E-43 379.3 19.4 255 704-984 184-446 (576)
131 3v8s_A RHO-associated protein 100.0 8.7E-39 3E-43 367.0 20.3 258 704-986 69-333 (410)
132 3mdy_A Bone morphogenetic prot 100.0 4.8E-38 1.6E-42 354.9 26.0 272 700-991 33-333 (337)
133 1qpc_A LCK kinase; alpha beta 100.0 1.8E-38 6.1E-43 348.1 21.8 257 704-990 13-270 (279)
134 3lm5_A Serine/threonine-protei 100.0 1.2E-38 4.3E-43 357.5 21.1 261 698-983 22-288 (327)
135 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 7.3E-39 2.5E-43 375.1 19.4 256 704-989 184-440 (452)
136 4e5w_A Tyrosine-protein kinase 100.0 1.4E-38 4.7E-43 353.4 20.5 263 704-988 21-301 (302)
137 2a2a_A Death-associated protei 100.0 2.3E-38 7.7E-43 354.6 22.4 261 701-984 9-274 (321)
138 2w4o_A Calcium/calmodulin-depe 100.0 9.5E-39 3.3E-43 361.2 19.4 253 702-984 51-307 (349)
139 1p4o_A Insulin-like growth fac 100.0 1.2E-38 4.2E-43 357.3 20.1 262 703-990 24-300 (322)
140 3hko_A Calcium/calmodulin-depe 100.0 1.5E-38 5.2E-43 360.2 21.0 268 698-984 20-332 (345)
141 1b6c_B TGF-B superfamily recep 100.0 3.3E-38 1.1E-42 357.0 23.8 269 700-991 38-338 (342)
142 1u59_A Tyrosine-protein kinase 100.0 2.9E-38 9.9E-43 347.9 22.6 262 704-993 9-276 (287)
143 3op5_A Serine/threonine-protei 100.0 1.5E-39 5E-44 370.9 12.6 276 704-991 35-331 (364)
144 2i0e_A Protein kinase C-beta I 100.0 1.1E-38 3.7E-43 359.8 19.5 252 703-983 19-277 (353)
145 2xir_A Vascular endothelial gr 100.0 1.3E-38 4.4E-43 356.0 19.8 263 704-991 27-312 (316)
146 2y94_A 5'-AMP-activated protei 100.0 1.2E-38 3.9E-43 372.5 20.2 251 704-984 16-268 (476)
147 2zmd_A Dual specificity protei 100.0 1E-38 3.4E-43 366.4 19.3 256 704-986 56-324 (390)
148 3a62_A Ribosomal protein S6 ki 100.0 1.9E-38 6.3E-43 355.8 21.0 253 704-984 17-278 (327)
149 3kn6_A Ribosomal protein S6 ki 100.0 8.3E-39 2.8E-43 358.1 17.9 254 703-983 7-271 (325)
150 3sv0_A Casein kinase I-like; t 100.0 1.3E-38 4.3E-43 372.8 20.0 262 704-990 7-279 (483)
151 3p1a_A MYT1 kinase, membrane-a 100.0 3E-38 1E-42 351.7 22.0 249 702-983 55-305 (311)
152 4fvq_A Tyrosine-protein kinase 100.0 5.9E-39 2E-43 353.8 16.1 251 704-989 8-275 (289)
153 3gxj_A TGF-beta receptor type- 100.0 6.1E-40 2.1E-44 364.5 8.2 265 704-991 3-299 (303)
154 2h34_A Serine/threonine-protei 100.0 3.3E-38 1.1E-42 351.1 22.0 268 700-992 30-299 (309)
155 3kk8_A Calcium/calmodulin depe 100.0 4E-38 1.4E-42 346.2 22.4 256 703-985 5-264 (284)
156 3g33_A Cell division protein k 100.0 1.1E-38 3.9E-43 354.9 18.1 268 702-983 7-297 (308)
157 2yfx_A Tyrosine-protein kinase 100.0 1.9E-38 6.6E-43 356.3 20.1 263 704-992 30-307 (327)
158 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.1E-38 7.3E-43 374.0 21.3 257 704-983 185-449 (543)
159 3fdn_A Serine/threonine-protei 100.0 1.2E-38 4E-43 349.5 17.7 250 704-984 9-259 (279)
160 3brb_A Proto-oncogene tyrosine 100.0 4.2E-38 1.4E-42 351.3 22.5 262 704-990 34-309 (313)
161 1mqb_A Ephrin type-A receptor 100.0 4.6E-38 1.6E-42 353.7 22.9 263 704-993 44-313 (333)
162 3cc6_A Protein tyrosine kinase 100.0 4.7E-38 1.6E-42 345.0 22.5 261 704-993 12-277 (281)
163 3f3z_A Calcium/calmodulin-depe 100.0 3.6E-38 1.2E-42 345.3 21.4 255 700-984 5-263 (277)
164 3is5_A Calcium-dependent prote 100.0 3E-38 1E-42 347.2 20.8 255 701-983 19-279 (285)
165 3cok_A Serine/threonine-protei 100.0 1.7E-38 6E-43 347.9 18.9 253 703-983 10-263 (278)
166 2x4f_A Myosin light chain kina 100.0 2.3E-38 7.7E-43 360.9 20.5 250 708-985 93-345 (373)
167 3dls_A PAS domain-containing s 100.0 1E-38 3.4E-43 358.9 17.3 253 701-984 21-276 (335)
168 2vd5_A DMPK protein; serine/th 100.0 9.2E-39 3.1E-43 367.0 17.0 259 704-985 61-330 (412)
169 4agu_A Cyclin-dependent kinase 100.0 2.6E-38 9E-43 352.6 20.1 263 703-983 2-285 (311)
170 4hgt_A Casein kinase I isoform 100.0 2.3E-38 7.7E-43 350.5 19.2 266 702-992 7-283 (296)
171 3c1x_A Hepatocyte growth facto 100.0 2.5E-38 8.6E-43 360.3 20.0 260 705-991 90-357 (373)
172 3lxp_A Non-receptor tyrosine-p 100.0 4.2E-38 1.4E-42 351.8 21.3 264 705-992 32-313 (318)
173 1u5q_A Serine/threonine protei 100.0 1.9E-38 6.4E-43 358.2 18.5 253 703-987 53-310 (348)
174 2jii_A Serine/threonine-protei 100.0 6.2E-39 2.1E-43 364.1 14.7 262 704-991 42-338 (352)
175 3oz6_A Mitogen-activated prote 100.0 1.8E-38 6.1E-43 365.3 18.7 206 700-921 5-234 (388)
176 2a19_B Interferon-induced, dou 100.0 1.6E-38 5.4E-43 349.5 17.4 254 700-992 7-277 (284)
177 3uzp_A CKI-delta, CKID, casein 100.0 3.9E-38 1.3E-42 348.6 20.6 263 704-991 9-282 (296)
178 1byg_A CSK, protein (C-termina 100.0 2.8E-38 9.5E-43 346.3 19.0 253 703-990 20-274 (278)
179 3llt_A Serine/threonine kinase 100.0 4.7E-38 1.6E-42 358.3 21.6 198 703-921 34-262 (360)
180 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4.7E-38 1.6E-42 358.8 21.5 252 704-990 65-340 (365)
181 2r5t_A Serine/threonine-protei 100.0 2.5E-38 8.7E-43 359.3 19.0 248 703-979 37-286 (373)
182 3f66_A Hepatocyte growth facto 100.0 7.5E-38 2.6E-42 346.7 22.1 260 704-990 25-292 (298)
183 1xbb_A Tyrosine-protein kinase 100.0 6.3E-38 2.2E-42 345.9 21.4 262 704-993 16-283 (291)
184 3i6u_A CDS1, serine/threonine- 100.0 2.8E-38 9.7E-43 366.3 19.2 265 700-985 131-402 (419)
185 4ejn_A RAC-alpha serine/threon 100.0 1.9E-38 6.4E-43 371.7 17.8 253 703-984 147-406 (446)
186 2v62_A Serine/threonine-protei 100.0 3E-39 1E-43 365.5 10.6 273 704-988 37-327 (345)
187 3bhy_A Death-associated protei 100.0 7E-38 2.4E-42 344.1 21.2 259 702-983 3-266 (283)
188 3mtl_A Cell division protein k 100.0 1.4E-38 4.6E-43 356.7 15.3 263 704-985 2-284 (324)
189 3pls_A Macrophage-stimulating 100.0 1.2E-37 4.1E-42 345.1 22.7 261 705-991 22-289 (298)
190 2eue_A Carbon catabolite derep 100.0 3.4E-38 1.2E-42 345.0 17.9 250 704-984 13-264 (275)
191 1fvr_A Tyrosine-protein kinase 100.0 6.4E-38 2.2E-42 352.0 20.2 262 704-994 25-305 (327)
192 3lxl_A Tyrosine-protein kinase 100.0 2.3E-38 7.7E-43 355.7 16.2 266 704-992 23-306 (327)
193 3g2f_A Bone morphogenetic prot 100.0 3E-38 1E-42 356.4 17.0 270 704-992 13-321 (336)
194 3a7i_A MST3 kinase, serine/thr 100.0 1.5E-37 5E-42 345.2 22.1 254 704-988 22-276 (303)
195 1vzo_A Ribosomal protein S6 ki 100.0 3.3E-38 1.1E-42 357.9 17.0 260 704-986 54-325 (355)
196 2vgo_A Serine/threonine-protei 100.0 5.5E-38 1.9E-42 345.1 18.3 250 704-984 14-264 (284)
197 2h8h_A Proto-oncogene tyrosine 100.0 3.2E-38 1.1E-42 377.1 17.6 256 704-989 267-523 (535)
198 3com_A Serine/threonine-protei 100.0 1.4E-37 4.7E-42 347.4 21.6 255 701-985 26-281 (314)
199 1ua2_A CAK, cell division prot 100.0 4.5E-38 1.6E-42 355.9 17.9 272 699-984 5-293 (346)
200 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.4E-38 8.3E-43 355.4 15.4 265 701-983 31-319 (329)
201 3lij_A Calcium/calmodulin depe 100.0 1.4E-37 4.7E-42 369.1 22.7 257 700-984 33-293 (494)
202 2rku_A Serine/threonine-protei 100.0 7.8E-38 2.7E-42 345.7 19.1 253 703-984 14-267 (294)
203 2ozo_A Tyrosine-protein kinase 100.0 1.7E-37 5.8E-42 376.0 23.6 257 706-990 337-599 (613)
204 2jam_A Calcium/calmodulin-depe 100.0 1.6E-37 5.5E-42 345.0 20.8 255 701-985 6-264 (304)
205 2owb_A Serine/threonine-protei 100.0 8.4E-38 2.9E-42 352.0 18.6 253 703-984 40-293 (335)
206 2wtk_C Serine/threonine-protei 100.0 2.6E-37 8.9E-42 343.6 22.1 258 702-984 3-265 (305)
207 2y7j_A Phosphorylase B kinase 100.0 1.7E-37 5.7E-42 353.3 20.9 263 700-983 90-360 (365)
208 1t4h_A Serine/threonine-protei 100.0 1.8E-37 6.1E-42 342.2 20.3 250 704-983 26-283 (290)
209 3mwu_A Calmodulin-domain prote 100.0 1.5E-37 5.3E-42 368.2 21.3 257 700-984 18-278 (486)
210 2w5a_A Serine/threonine-protei 100.0 3.9E-38 1.3E-42 345.4 14.8 256 703-985 5-270 (279)
211 2w1i_A JAK2; chromosomal rearr 100.0 2.1E-37 7.1E-42 347.6 20.7 264 704-990 41-323 (326)
212 2buj_A Serine/threonine-protei 100.0 6.1E-38 2.1E-42 350.7 16.2 261 704-989 29-306 (317)
213 1cm8_A Phosphorylated MAP kina 100.0 2E-37 6.7E-42 352.8 20.6 257 703-984 24-309 (367)
214 1x8b_A WEE1HU, WEE1-like prote 100.0 1.7E-37 5.7E-42 342.1 19.4 249 701-983 8-280 (289)
215 3nyv_A Calmodulin-domain prote 100.0 1.2E-37 4.3E-42 369.2 19.6 257 702-985 24-284 (484)
216 4aaa_A Cyclin-dependent kinase 100.0 2E-37 6.9E-42 348.5 20.3 266 703-985 24-309 (331)
217 2vwi_A Serine/threonine-protei 100.0 4.1E-38 1.4E-42 349.7 14.4 259 704-983 15-288 (303)
218 1u46_A ACK-1, activated CDC42 100.0 1.2E-37 4E-42 343.9 18.0 263 704-991 18-286 (291)
219 3eqc_A Dual specificity mitoge 100.0 7E-38 2.4E-42 356.8 16.6 200 704-921 33-233 (360)
220 3bz5_A Internalin-J, INLJ; leu 100.0 1.6E-37 5.5E-42 363.1 20.0 359 18-477 36-394 (457)
221 2ac3_A MAP kinase-interacting 100.0 1.3E-37 4.5E-42 347.8 18.4 256 704-983 12-296 (316)
222 2xrw_A Mitogen-activated prote 100.0 2E-37 6.7E-42 354.0 20.0 261 703-985 24-321 (371)
223 2ycf_A Serine/threonine-protei 100.0 3E-37 1E-41 345.7 21.1 264 700-984 6-276 (322)
224 2r3i_A Cell division protein k 100.0 2.6E-37 9E-42 342.5 20.1 264 704-983 3-284 (299)
225 3rp9_A Mitogen-activated prote 100.0 1.6E-37 5.5E-42 365.5 19.3 196 704-914 53-280 (458)
226 3n9x_A Phosphotransferase; mal 100.0 3.3E-37 1.1E-41 359.2 21.3 202 703-919 25-253 (432)
227 3q5i_A Protein kinase; CDPK, m 100.0 2.6E-37 9E-42 367.7 20.8 267 700-985 32-304 (504)
228 2x7f_A TRAF2 and NCK-interacti 100.0 1.8E-37 6E-42 348.4 18.0 253 703-984 23-288 (326)
229 3kvw_A DYRK2, dual specificity 100.0 1.9E-37 6.6E-42 360.2 18.8 199 702-921 95-302 (429)
230 3byv_A Rhoptry kinase; malaria 100.0 8.3E-38 2.8E-42 358.1 15.4 244 704-983 73-360 (377)
231 4fl3_A Tyrosine-protein kinase 100.0 3.4E-37 1.2E-41 374.1 21.5 253 709-989 374-631 (635)
232 3rgf_A Cyclin-dependent kinase 100.0 9.5E-38 3.3E-42 361.2 15.5 203 702-921 18-239 (405)
233 2h6d_A 5'-AMP-activated protei 100.0 3.4E-37 1.2E-41 337.3 19.1 251 704-984 11-263 (276)
234 2id5_A Lingo-1, leucine rich r 100.0 9.1E-38 3.1E-42 370.2 15.5 347 220-618 14-361 (477)
235 2clq_A Mitogen-activated prote 100.0 3.9E-37 1.3E-41 340.4 19.5 252 705-983 23-279 (295)
236 2pml_X PFPK7, Ser/Thr protein 100.0 3.7E-37 1.3E-41 349.3 19.7 267 703-984 30-324 (348)
237 1o6v_A Internalin A; bacterial 100.0 7.9E-37 2.7E-41 360.4 23.2 345 47-423 45-389 (466)
238 3mi9_A Cell division protein k 100.0 5.5E-37 1.9E-41 348.1 20.6 264 703-984 16-313 (351)
239 1j1b_A Glycogen synthase kinas 100.0 4.5E-37 1.5E-41 356.4 19.6 258 704-984 54-338 (420)
240 3pfq_A PKC-B, PKC-beta, protei 100.0 4.3E-37 1.5E-41 375.7 20.4 252 703-983 340-598 (674)
241 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.6E-37 5.6E-42 347.6 15.2 260 704-992 33-305 (319)
242 2j7t_A Serine/threonine-protei 100.0 2.2E-37 7.5E-42 343.7 15.8 253 703-983 18-276 (302)
243 2fst_X Mitogen-activated prote 100.0 3.1E-37 1.1E-41 350.7 17.2 259 703-984 28-313 (367)
244 3nsz_A CK II alpha, casein kin 100.0 7.3E-37 2.5E-41 344.0 20.0 253 704-983 36-320 (330)
245 3fme_A Dual specificity mitoge 100.0 6.9E-37 2.4E-41 337.5 19.2 256 704-985 7-269 (290)
246 3ll6_A Cyclin G-associated kin 100.0 5.4E-37 1.8E-41 346.3 18.6 256 704-990 28-309 (337)
247 3q60_A ROP5B; pseudokinase, tr 100.0 1.1E-37 3.8E-42 356.3 13.0 257 704-984 62-354 (371)
248 3fhr_A MAP kinase-activated pr 100.0 3.2E-37 1.1E-41 347.1 16.5 255 702-985 26-290 (336)
249 2wei_A Calmodulin-domain prote 100.0 1.6E-36 5.5E-41 333.9 21.4 257 700-984 18-278 (287)
250 1o6v_A Internalin A; bacterial 100.0 1.6E-36 5.4E-41 357.8 22.8 345 119-495 45-389 (466)
251 3bz5_A Internalin-J, INLJ; leu 100.0 9.7E-37 3.3E-41 356.5 19.9 362 87-525 33-394 (457)
252 3pg1_A Mitogen-activated prote 100.0 2.9E-37 9.8E-42 352.1 15.0 275 700-983 18-317 (362)
253 1phk_A Phosphorylase kinase; g 100.0 1.1E-36 3.6E-41 337.4 19.0 263 701-983 14-284 (298)
254 2j0j_A Focal adhesion kinase 1 100.0 1.6E-36 5.5E-41 369.5 22.3 258 704-990 390-652 (656)
255 3qyz_A Mitogen-activated prote 100.0 1.3E-36 4.5E-41 346.4 20.0 263 704-984 27-315 (364)
256 2b9h_A MAP kinase FUS3, mitoge 100.0 1.7E-36 5.8E-41 344.5 20.8 262 703-983 10-306 (353)
257 3eb0_A Putative uncharacterize 100.0 5.2E-37 1.8E-41 352.2 16.6 256 702-983 5-322 (383)
258 1z57_A Dual specificity protei 100.0 1.1E-36 3.9E-41 343.9 18.8 197 704-921 14-237 (339)
259 1zy4_A Serine/threonine-protei 100.0 1.8E-36 6E-41 336.5 19.8 254 702-984 4-285 (303)
260 2vx3_A Dual specificity tyrosi 100.0 2.5E-36 8.5E-41 346.4 21.6 201 702-921 52-261 (382)
261 3an0_A Dual specificity mitoge 100.0 8.4E-37 2.9E-41 345.0 17.3 255 704-986 51-314 (340)
262 3cek_A Dual specificity protei 100.0 9.8E-37 3.3E-41 340.2 17.4 255 704-985 28-295 (313)
263 1wak_A Serine/threonine-protei 100.0 8.9E-37 3E-41 352.9 17.6 200 703-922 36-297 (397)
264 4exu_A Mitogen-activated prote 100.0 1.8E-36 6.1E-41 346.1 19.8 259 703-984 41-325 (371)
265 1blx_A Cyclin-dependent kinase 100.0 2.8E-36 9.7E-41 338.7 20.2 259 704-983 11-297 (326)
266 4e7w_A Glycogen synthase kinas 100.0 1.1E-36 3.7E-41 350.2 17.1 258 704-984 40-323 (394)
267 2id5_A Lingo-1, leucine rich r 100.0 1.5E-36 5E-41 359.9 17.3 301 194-494 33-333 (477)
268 3coi_A Mitogen-activated prote 100.0 5.8E-36 2E-40 339.8 20.8 253 704-983 24-306 (353)
269 3e3p_A Protein kinase, putativ 100.0 3.1E-36 1.1E-40 343.3 18.1 267 698-984 17-316 (360)
270 2eu9_A Dual specificity protei 100.0 4.9E-36 1.7E-40 341.0 19.4 198 703-921 18-242 (355)
271 2i6l_A Mitogen-activated prote 100.0 1.8E-36 6.1E-41 339.3 14.6 255 704-984 11-307 (320)
272 2dyl_A Dual specificity mitoge 100.0 5.9E-36 2E-40 334.8 16.9 255 703-984 24-285 (318)
273 2rio_A Serine/threonine-protei 100.0 7.3E-36 2.5E-40 347.8 17.6 254 704-984 15-297 (434)
274 3a99_A Proto-oncogene serine/t 100.0 2.3E-36 7.9E-41 337.9 12.3 248 702-983 41-294 (320)
275 2iwi_A Serine/threonine-protei 100.0 3.6E-36 1.2E-40 335.5 13.8 252 698-983 25-284 (312)
276 1q8y_A SR protein kinase; tran 100.0 4.5E-36 1.5E-40 343.9 14.6 198 704-921 19-238 (373)
277 3aln_A Dual specificity mitoge 100.0 8.5E-36 2.9E-40 334.8 16.3 258 704-986 22-289 (327)
278 3p23_A Serine/threonine-protei 100.0 8.3E-36 2.8E-40 346.0 15.8 250 705-984 25-285 (432)
279 3qa8_A MGC80376 protein; kinas 100.0 5.5E-36 1.9E-40 356.7 13.4 259 701-981 11-296 (676)
280 3o6n_A APL1; leucine-rich repe 100.0 2.1E-35 7.4E-40 340.1 16.1 335 216-617 44-378 (390)
281 3uqc_A Probable conserved tran 100.0 3.4E-35 1.2E-39 322.0 14.5 236 704-992 31-268 (286)
282 2pzi_A Probable serine/threoni 100.0 1.5E-34 5E-39 356.3 19.4 240 704-988 80-327 (681)
283 3dzo_A Rhoptry kinase domain; 100.0 8.1E-35 2.8E-39 336.6 15.9 244 704-983 78-364 (413)
284 3oja_B Anopheles plasmodium-re 100.0 6.6E-35 2.3E-39 354.6 15.9 335 216-617 50-384 (597)
285 3m2w_A MAP kinase-activated pr 100.0 1.7E-34 5.7E-39 319.7 15.2 236 701-986 14-260 (299)
286 3o6n_A APL1; leucine-rich repe 100.0 4.7E-34 1.6E-38 328.9 15.7 310 168-519 44-353 (390)
287 4fmz_A Internalin; leucine ric 100.0 1.7E-33 5.7E-38 319.0 18.7 308 164-518 39-346 (347)
288 4fmz_A Internalin; leucine ric 100.0 3.3E-33 1.1E-37 316.5 19.3 308 140-494 39-346 (347)
289 2vuw_A Serine/threonine-protei 100.0 6.2E-34 2.1E-38 320.8 12.4 199 703-919 19-278 (336)
290 3oja_B Anopheles plasmodium-re 100.0 1.5E-33 5.2E-38 342.6 14.5 310 168-519 50-359 (597)
291 1ogq_A PGIP-2, polygalacturona 100.0 3.9E-33 1.3E-37 310.1 12.4 258 337-621 50-312 (313)
292 2ft3_A Biglycan; proteoglycan, 100.0 5.9E-32 2E-36 303.9 18.8 290 170-516 34-331 (332)
293 1xku_A Decorin; proteoglycan, 100.0 7E-32 2.4E-36 303.1 18.8 289 194-516 32-330 (330)
294 2ft3_A Biglycan; proteoglycan, 100.0 7.9E-32 2.7E-36 302.9 18.9 269 242-541 55-331 (332)
295 1xku_A Decorin; proteoglycan, 100.0 1.4E-31 4.7E-36 300.8 19.0 289 218-541 32-330 (330)
296 1ogq_A PGIP-2, polygalacturona 100.0 3.3E-32 1.1E-36 302.6 10.2 248 218-492 51-302 (313)
297 1z7x_W Ribonuclease inhibitor; 100.0 1.2E-34 4.1E-39 342.1 -18.8 374 145-518 3-440 (461)
298 1z7x_W Ribonuclease inhibitor; 100.0 2.2E-34 7.5E-39 339.9 -21.1 267 138-423 106-412 (461)
299 4azs_A Methyltransferase WBDD; 100.0 1.3E-29 4.5E-34 302.7 5.1 196 711-918 241-438 (569)
300 2z80_A TOLL-like receptor 2, v 100.0 2.6E-29 9E-34 284.9 6.7 281 215-522 29-318 (353)
301 2z66_A Variable lymphocyte rec 100.0 9.6E-29 3.3E-33 274.4 10.8 252 244-521 10-264 (306)
302 3ogk_B Coronatine-insensitive 100.0 9E-32 3.1E-36 328.2 -15.3 402 70-490 110-547 (592)
303 3ogk_B Coronatine-insensitive 100.0 1.7E-31 5.7E-36 325.8 -13.0 425 17-467 66-548 (592)
304 2z80_A TOLL-like receptor 2, v 100.0 4.5E-29 1.5E-33 283.0 7.6 278 192-495 30-315 (353)
305 2z66_A Variable lymphocyte rec 99.9 1.9E-28 6.4E-33 272.1 11.2 281 196-504 10-297 (306)
306 1ozn_A Reticulon 4 receptor; N 99.9 4.1E-28 1.4E-32 266.3 12.5 238 265-503 32-270 (285)
307 1wwl_A Monocyte differentiatio 99.9 1.5E-28 5E-33 273.3 8.5 249 309-591 39-310 (312)
308 4fcg_A Uncharacterized protein 99.9 1.3E-27 4.3E-32 267.2 14.8 237 22-279 79-315 (328)
309 1ozn_A Reticulon 4 receptor; N 99.9 8.7E-28 3E-32 263.7 12.8 248 314-563 33-283 (285)
310 3zyi_A Leucine-rich repeat-con 99.9 1.7E-27 5.8E-32 279.5 14.3 229 290-520 76-305 (452)
311 3zyi_A Leucine-rich repeat-con 99.9 2.4E-27 8.3E-32 278.2 15.1 247 195-470 56-303 (452)
312 3zyj_A Leucine-rich repeat-con 99.9 2.9E-27 9.9E-32 276.5 15.5 246 195-469 45-291 (440)
313 3zyj_A Leucine-rich repeat-con 99.9 3.7E-27 1.3E-31 275.6 15.6 248 170-446 44-292 (440)
314 4fcg_A Uncharacterized protein 99.9 4.9E-27 1.7E-31 262.4 15.8 237 47-304 80-316 (328)
315 1wwl_A Monocyte differentiatio 99.9 3.5E-28 1.2E-32 270.2 6.3 249 285-568 39-310 (312)
316 3o53_A Protein LRIM1, AGAP0063 99.9 1E-28 3.4E-33 275.3 -3.7 180 361-548 99-281 (317)
317 3o53_A Protein LRIM1, AGAP0063 99.9 1.9E-28 6.4E-33 273.1 -1.8 267 195-499 12-281 (317)
318 3g06_A SSPH2 (leucine-rich rep 99.9 8.8E-26 3E-30 271.2 19.7 269 193-529 40-308 (622)
319 3g06_A SSPH2 (leucine-rich rep 99.9 1.3E-25 4.5E-30 269.7 19.0 266 146-479 41-306 (622)
320 3en9_A Glycoprotease, O-sialog 99.9 1.5E-26 5.3E-31 274.7 10.4 195 706-919 338-539 (540)
321 3oja_A Leucine-rich immune mol 99.9 1.3E-26 4.6E-31 273.2 2.6 149 361-513 120-270 (487)
322 2p1m_B Transport inhibitor res 99.9 1.6E-29 5.5E-34 308.5 -23.3 432 19-469 61-543 (594)
323 2p1m_B Transport inhibitor res 99.9 2.2E-29 7.6E-34 307.2 -22.7 131 70-201 103-243 (594)
324 3oja_A Leucine-rich immune mol 99.9 1.1E-26 3.6E-31 274.0 0.4 193 333-538 76-270 (487)
325 3rfs_A Internalin B, repeat mo 99.9 2.3E-24 8E-29 234.3 14.6 209 333-553 37-245 (272)
326 3rfs_A Internalin B, repeat mo 99.9 8.2E-25 2.8E-29 237.9 10.8 230 288-530 18-247 (272)
327 2z62_A TOLL-like receptor 4, v 99.9 1.5E-24 5.1E-29 236.6 12.1 208 314-522 29-241 (276)
328 2z62_A TOLL-like receptor 4, v 99.9 2E-24 6.8E-29 235.7 11.3 203 267-470 30-237 (276)
329 2o6q_A Variable lymphocyte rec 99.9 2.3E-23 7.7E-28 226.3 17.9 179 338-519 17-195 (270)
330 2o6q_A Variable lymphocyte rec 99.9 1.7E-23 5.9E-28 227.3 16.7 203 316-521 19-221 (270)
331 1p9a_G Platelet glycoprotein I 99.9 1.6E-23 5.4E-28 229.5 15.6 205 359-594 8-212 (290)
332 1p9a_G Platelet glycoprotein I 99.9 2.5E-23 8.7E-28 227.8 14.1 179 334-518 7-185 (290)
333 4glp_A Monocyte differentiatio 99.9 5.5E-23 1.9E-27 228.1 9.7 200 361-590 91-307 (310)
334 3goz_A Leucine-rich repeat-con 99.9 1.4E-24 4.9E-29 246.5 -3.3 262 245-526 2-305 (362)
335 3m19_A Variable lymphocyte rec 99.9 6.3E-22 2.2E-26 212.3 15.1 183 337-522 14-196 (251)
336 4glp_A Monocyte differentiatio 99.9 2.1E-22 7.3E-27 223.4 11.2 202 336-568 90-308 (310)
337 3goz_A Leucine-rich repeat-con 99.9 7.3E-24 2.5E-28 240.7 -1.3 258 150-427 3-302 (362)
338 2xwt_C Thyrotropin receptor; s 99.9 1.2E-22 3.9E-27 216.5 7.8 178 290-470 32-218 (239)
339 1zar_A RIO2 kinase; serine kin 99.9 2.3E-22 7.8E-27 218.7 9.9 153 706-891 92-252 (282)
340 1h6u_A Internalin H; cell adhe 99.9 5.5E-22 1.9E-26 219.5 13.1 192 360-591 40-231 (308)
341 2xwt_C Thyrotropin receptor; s 99.9 1.4E-22 4.8E-27 215.8 8.0 196 242-467 32-236 (239)
342 3m19_A Variable lymphocyte rec 99.9 9.7E-22 3.3E-26 210.9 14.0 154 362-518 15-168 (251)
343 1h6u_A Internalin H; cell adhe 99.9 3.9E-22 1.3E-26 220.7 10.0 213 289-519 19-231 (308)
344 2ast_B S-phase kinase-associat 99.9 1.2E-23 4E-28 236.8 -4.1 253 50-311 49-315 (336)
345 2ca6_A RAN GTPase-activating p 99.9 2.5E-24 8.6E-29 247.1 -10.2 250 209-470 24-316 (386)
346 2ca6_A RAN GTPase-activating p 99.8 4.1E-24 1.4E-28 245.3 -10.1 265 160-443 23-340 (386)
347 4ay9_X Follicle-stimulating ho 99.8 3E-21 1E-25 217.9 12.2 239 197-467 13-256 (350)
348 2ast_B S-phase kinase-associat 99.8 5.2E-23 1.8E-27 231.5 -2.4 222 171-419 49-282 (336)
349 4ay9_X Follicle-stimulating ho 99.8 2.6E-21 8.8E-26 218.5 11.0 241 172-444 12-257 (350)
350 2o6s_A Variable lymphocyte rec 99.8 1.6E-20 5.5E-25 195.1 11.1 175 341-525 11-185 (208)
351 2o6s_A Variable lymphocyte rec 99.8 9.5E-20 3.3E-24 189.3 14.6 181 364-555 10-190 (208)
352 3cvr_A Invasion plasmid antige 99.8 3E-20 1E-24 220.3 8.5 188 314-529 60-254 (571)
353 3cvr_A Invasion plasmid antige 99.8 3.7E-19 1.3E-23 210.9 13.3 134 338-494 60-193 (571)
354 2v9t_B SLIT homolog 2 protein 99.8 2.7E-19 9.4E-24 187.2 10.4 128 388-518 14-141 (220)
355 1h6t_A Internalin B; cell adhe 99.8 3E-19 1E-23 195.7 10.6 173 333-519 42-214 (291)
356 1h6t_A Internalin B; cell adhe 99.8 1.5E-19 5.2E-24 198.0 8.1 193 288-496 23-215 (291)
357 1m9s_A Internalin B; cell inva 99.8 4.6E-19 1.6E-23 212.7 12.9 199 288-502 20-218 (605)
358 2v70_A SLIT-2, SLIT homolog 2 99.8 2.7E-19 9.1E-24 187.3 9.3 157 436-618 35-194 (220)
359 2v9t_B SLIT homolog 2 protein 99.8 7.4E-19 2.5E-23 183.9 11.6 152 365-519 15-166 (220)
360 2xot_A Amphoterin-induced prot 99.8 2.1E-19 7E-24 203.7 7.6 177 340-519 21-203 (361)
361 2v70_A SLIT-2, SLIT homolog 2 99.8 8E-19 2.7E-23 183.6 11.4 156 364-522 14-170 (220)
362 1m9s_A Internalin B; cell inva 99.8 7.9E-19 2.7E-23 210.6 11.9 194 311-520 19-212 (605)
363 2xot_A Amphoterin-induced prot 99.8 8.4E-19 2.9E-23 198.7 10.3 160 364-526 21-184 (361)
364 4b8c_D Glucose-repressible alc 99.8 1.4E-18 4.8E-23 214.0 12.4 223 337-590 173-404 (727)
365 1dce_A Protein (RAB geranylger 99.8 3.4E-20 1.2E-24 221.2 -2.2 217 262-512 346-567 (567)
366 1dce_A Protein (RAB geranylger 99.8 5.4E-20 1.8E-24 219.5 -0.5 217 238-488 346-567 (567)
367 3e6j_A Variable lymphocyte rec 99.8 4.2E-18 1.4E-22 179.4 13.6 156 363-522 21-176 (229)
368 3e6j_A Variable lymphocyte rec 99.7 5.9E-18 2E-22 178.3 12.7 153 339-495 21-173 (229)
369 1zth_A RIO1 serine protein kin 99.7 3.6E-18 1.2E-22 183.4 10.8 148 706-867 49-220 (258)
370 1xeu_A Internalin C; cellular 99.7 1.8E-18 6.2E-23 186.3 8.0 169 287-470 17-185 (263)
371 1xeu_A Internalin C; cellular 99.7 3.8E-18 1.3E-22 183.7 9.0 170 311-495 17-186 (263)
372 3sb4_A Hypothetical leucine ri 99.7 1.5E-18 5.1E-23 194.1 1.6 102 360-463 225-327 (329)
373 4ezg_A Putative uncharacterize 99.7 1.5E-17 5E-22 171.0 8.9 151 360-518 43-194 (197)
374 4ezg_A Putative uncharacterize 99.7 1.4E-17 4.7E-22 171.2 7.8 155 333-495 40-195 (197)
375 3sb4_A Hypothetical leucine ri 99.7 3.3E-18 1.1E-22 191.2 3.0 283 216-512 24-328 (329)
376 4b8c_D Glucose-repressible alc 99.7 4.3E-18 1.5E-22 209.7 4.0 224 313-568 173-405 (727)
377 1w8a_A SLIT protein; signaling 99.7 4E-17 1.4E-21 166.8 8.6 132 388-522 11-143 (192)
378 1w8a_A SLIT protein; signaling 99.7 1.4E-16 4.7E-21 162.8 11.9 131 364-497 11-142 (192)
379 4fdw_A Leucine rich hypothetic 99.6 3.4E-16 1.1E-20 178.6 12.2 269 193-517 113-382 (401)
380 4gyi_A RIO2 kinase; protein ki 99.6 1.2E-16 4.2E-21 177.1 7.8 149 706-867 97-266 (397)
381 4fdw_A Leucine rich hypothetic 99.6 6.1E-16 2.1E-20 176.4 12.8 271 168-470 112-383 (401)
382 2ell_A Acidic leucine-rich nuc 99.6 5.7E-16 1.9E-20 154.7 8.6 132 385-518 24-160 (168)
383 2ell_A Acidic leucine-rich nuc 99.6 9.5E-16 3.2E-20 153.0 8.0 131 362-494 25-160 (168)
384 4fs7_A Uncharacterized protein 99.6 5.1E-15 1.7E-19 169.8 14.4 331 160-509 62-392 (394)
385 4fs7_A Uncharacterized protein 99.6 7.2E-15 2.5E-19 168.5 15.2 319 180-515 58-376 (394)
386 2wfh_A SLIT homolog 2 protein 99.6 2.6E-15 8.8E-20 153.2 9.4 126 341-470 14-139 (193)
387 2wfh_A SLIT homolog 2 protein 99.6 4.6E-15 1.6E-19 151.4 10.9 128 388-519 13-140 (193)
388 2o6r_A Variable lymphocyte rec 99.6 5.9E-15 2E-19 148.6 11.4 133 387-522 9-141 (177)
389 2je0_A Acidic leucine-rich nuc 99.6 1.5E-15 5.2E-20 148.2 6.3 127 385-513 17-148 (149)
390 2o6r_A Variable lymphocyte rec 99.6 5.9E-15 2E-19 148.6 10.3 129 340-471 10-138 (177)
391 2je0_A Acidic leucine-rich nuc 99.6 1.7E-15 5.9E-20 147.8 6.1 127 361-489 17-148 (149)
392 1a9n_A U2A', U2A'; complex (nu 99.5 7.8E-15 2.7E-19 147.5 5.5 132 381-518 15-153 (176)
393 1a9n_A U2A', U2A'; complex (nu 99.5 2E-14 6.8E-19 144.5 5.8 132 357-494 15-153 (176)
394 1ds9_A Outer arm dynein; leuci 99.5 7.4E-16 2.5E-20 158.3 -5.2 137 333-474 14-157 (198)
395 1ds9_A Outer arm dynein; leuci 99.4 4.4E-16 1.5E-20 160.0 -8.8 156 357-519 14-186 (198)
396 3g39_A Variable lymphocyte rec 99.4 5.7E-13 1.9E-17 132.8 9.7 108 411-521 11-118 (170)
397 2r9u_A Variable lymphocyte rec 99.4 1.2E-12 4.1E-17 130.9 11.2 105 412-519 15-119 (174)
398 3g39_A Variable lymphocyte rec 99.4 7.6E-13 2.6E-17 131.9 9.7 86 385-470 30-115 (170)
399 4gt6_A Cell surface protein; l 99.4 2.9E-12 9.8E-17 146.8 15.0 134 377-517 257-390 (394)
400 2r9u_A Variable lymphocyte rec 99.4 8.1E-13 2.8E-17 132.1 8.6 86 385-470 33-118 (174)
401 4gt6_A Cell surface protein; l 99.4 2.4E-12 8.1E-17 147.5 13.6 135 352-493 256-390 (394)
402 3tm0_A Aminoglycoside 3'-phosp 99.2 4.1E-11 1.4E-15 128.9 10.6 146 700-864 10-212 (263)
403 3un9_A NLR family member X1; l 99.2 9.9E-14 3.4E-18 156.6 -10.5 89 430-518 180-283 (372)
404 3un9_A NLR family member X1; l 99.2 1.7E-13 5.8E-18 154.6 -9.0 139 409-568 101-253 (372)
405 2ifg_A High affinity nerve gro 99.2 2.5E-11 8.4E-16 136.5 8.4 103 366-471 13-117 (347)
406 2ifg_A High affinity nerve gro 99.1 6.7E-11 2.3E-15 132.9 8.3 103 414-519 13-117 (347)
407 4h09_A Hypothetical leucine ri 99.1 7.1E-10 2.4E-14 126.2 16.7 313 142-480 43-355 (379)
408 1nd4_A Aminoglycoside 3'-phosp 99.1 1.3E-10 4.3E-15 124.9 8.7 137 705-865 21-214 (264)
409 4h09_A Hypothetical leucine ri 99.1 9E-10 3.1E-14 125.3 15.8 316 164-505 41-356 (379)
410 3dxp_A Putative acyl-COA dehyd 99.0 1.6E-09 5.6E-14 122.1 12.4 142 709-865 43-248 (359)
411 3sg8_A APH(2'')-ID; antibiotic 98.9 8.7E-10 3E-14 121.2 5.3 183 709-918 25-287 (304)
412 2ra8_A Uncharacterized protein 98.8 1.4E-10 4.8E-15 129.5 -3.8 205 25-252 108-341 (362)
413 2ra8_A Uncharacterized protein 98.8 7.5E-10 2.6E-14 123.6 0.0 137 164-303 134-293 (362)
414 3r70_A Aminoglycoside phosphot 98.6 2E-07 6.9E-12 102.9 12.9 137 705-866 38-238 (320)
415 3d1u_A Putative fructosamine-3 98.5 8.4E-07 2.9E-11 95.8 13.1 78 707-799 18-98 (288)
416 4gkh_A Aminoglycoside 3'-phosp 98.4 1.1E-06 3.8E-11 94.5 10.8 135 711-865 31-223 (272)
417 3rw6_A Nuclear RNA export fact 98.3 9.6E-08 3.3E-12 100.8 1.4 92 429-522 137-237 (267)
418 3tdw_A Gentamicin resistance p 98.3 2.2E-06 7.4E-11 93.8 11.8 136 709-865 24-224 (306)
419 3rw6_A Nuclear RNA export fact 98.2 8.2E-08 2.8E-12 101.3 -1.8 66 407-474 168-237 (267)
420 3ovc_A Hygromycin-B 4-O-kinase 98.2 3.7E-06 1.3E-10 94.2 11.1 139 708-865 45-243 (362)
421 1io0_A Tropomodulin; LRR prote 98.2 1.1E-07 3.7E-12 95.7 -2.4 18 501-518 147-164 (185)
422 3ats_A Putative uncharacterize 98.2 4.8E-06 1.6E-10 93.4 10.5 84 709-800 25-122 (357)
423 1io0_A Tropomodulin; LRR prote 98.1 1.8E-07 6.2E-12 94.0 -2.8 16 191-206 63-78 (185)
424 3e4g_A ATP synthase subunit S, 98.0 4.9E-07 1.7E-11 88.3 -0.4 84 48-131 61-150 (176)
425 3e4g_A ATP synthase subunit S, 97.9 1.7E-06 6E-11 84.4 1.0 34 170-203 62-95 (176)
426 2q83_A YTAA protein; 2635576, 97.9 3E-05 1E-09 86.4 11.0 139 710-864 38-251 (346)
427 3jr1_A Putative fructosamine-3 97.8 5.6E-05 1.9E-09 82.2 11.3 137 709-861 41-232 (312)
428 2olc_A MTR kinase, methylthior 97.8 4.1E-05 1.4E-09 87.2 10.1 82 709-796 35-120 (397)
429 3f7w_A Putative fructosamine-3 97.7 0.00023 7.8E-09 76.9 12.4 79 705-798 16-97 (288)
430 2pyw_A Uncharacterized protein 97.5 0.00039 1.3E-08 79.6 12.2 76 835-914 232-312 (420)
431 3dxq_A Choline/ethanolamine ki 97.3 0.00055 1.9E-08 74.4 9.4 71 709-798 23-95 (301)
432 3csv_A Aminoglycoside phosphot 97.2 0.00055 1.9E-08 75.6 9.0 31 835-865 183-217 (333)
433 2ppq_A HSK, HK, homoserine kin 97.2 0.0005 1.7E-08 75.5 7.9 142 709-864 27-216 (322)
434 1nw1_A Choline kinase (49.2 KD 97.1 0.0014 4.7E-08 75.0 10.4 73 709-798 78-159 (429)
435 3feg_A Choline/ethanolamine ki 97.1 0.0016 5.4E-08 72.7 10.1 141 709-865 55-254 (379)
436 1zyl_A Hypothetical protein YI 97.0 0.0031 1.1E-07 69.3 11.6 141 710-865 32-223 (328)
437 2qg7_A Ethanolamine kinase PV0 96.9 0.0043 1.5E-07 71.1 11.7 74 709-798 113-188 (458)
438 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00012 4.3E-09 72.7 -1.7 82 385-466 41-135 (197)
439 3c5i_A Choline kinase; choline 96.8 0.0024 8.2E-08 71.6 8.6 74 709-798 38-121 (369)
440 3i1a_A Spectinomycin phosphotr 96.5 0.0052 1.8E-07 67.8 9.2 31 835-865 206-236 (339)
441 1pgv_A TMD-1, tropomodulin TMD 96.3 0.00027 9.1E-09 70.3 -2.6 90 189-278 66-170 (197)
442 3rfe_A Platelet glycoprotein I 96.3 0.004 1.4E-07 57.8 5.5 55 413-469 12-67 (130)
443 3rfe_A Platelet glycoprotein I 96.1 0.0047 1.6E-07 57.3 5.0 56 461-518 12-68 (130)
444 2yle_A Protein spire homolog 1 95.9 0.027 9.1E-07 56.2 9.4 102 797-917 34-135 (229)
445 3f2s_A CK, chetk-alpha, cholin 95.7 0.024 8.2E-07 63.3 9.1 152 709-864 57-279 (401)
446 3mes_A Choline kinase; malaria 95.6 0.047 1.6E-06 61.6 11.0 140 709-865 75-291 (424)
447 3g15_A CK, chetk-alpha, cholin 91.1 0.72 2.5E-05 51.8 10.3 30 836-865 245-280 (401)
448 4ann_A ESSB; membrane protein, 88.1 1.3 4.6E-05 44.0 8.3 122 761-919 36-158 (215)
449 2ks1_B Epidermal growth factor 87.3 1.1 3.8E-05 31.8 5.0 29 645-673 12-40 (44)
450 4ano_A ESSB; membrane protein, 86.6 2.2 7.5E-05 42.6 8.9 114 769-919 48-163 (219)
451 2l2t_A Receptor tyrosine-prote 84.1 1.8 6.2E-05 30.6 4.8 27 646-672 12-38 (44)
452 2jwa_A Receptor tyrosine-prote 78.6 4.7 0.00016 28.5 5.3 26 647-672 14-39 (44)
453 3cxl_A N-chimerin; SH2, RHO-GA 69.8 0.61 2.1E-05 53.3 -1.5 62 709-782 147-215 (463)
454 2k1k_A Ephrin type-A receptor 60.6 8.8 0.0003 26.3 3.4 24 648-671 14-37 (38)
455 1cja_A Protein (actin-fragmin 56.1 32 0.0011 36.5 8.6 77 785-865 156-237 (342)
456 2lz0_A Uncharacterized protein 50.8 22 0.00074 30.5 5.3 46 372-418 7-52 (100)
457 2l9u_A Receptor tyrosine-prote 50.1 25 0.00086 22.9 4.0 28 644-671 6-34 (40)
458 2lz0_A Uncharacterized protein 40.2 59 0.002 27.7 6.4 41 209-250 12-52 (100)
459 3ls8_A Phosphatidylinositol 3- 37.1 2E+02 0.0067 33.4 11.9 82 774-863 402-500 (614)
460 2k21_A Potassium voltage-gated 29.4 1.1E+02 0.0036 27.0 5.9 31 645-675 53-83 (138)
461 1zza_A Stannin, AG8_1; helix, 26.3 34 0.0012 26.5 2.1 9 659-667 30-38 (90)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.8e-76 Score=739.64 Aligned_cols=616 Identities=35% Similarity=0.528 Sum_probs=468.3
Q ss_pred eeeEeecCCCCCCC---CCccccCCCCCcEEEccCCcCCCCCCCCCCCCCcccEEecCCCCCCCCCCh--hhcCcccCCE
Q 043053 2 VTEITIQSVPLQLP---IPTNLSSFKHLQTLVISDANLTGSIPFDIGDCVGLIVLDFSSNNLVGTLPS--SLGKLHNLEE 76 (1058)
Q Consensus 2 ~~~~~~~~~~~~~~---~p~~~~~~~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~i~~~lp~--~l~~l~~L~~ 76 (1058)
||++.+...++.-. +|+.+.++++|+.++++.+.+. .+|..++.+++|++|+|++|.+++.+|. .+++|++|++
T Consensus 52 v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~ 130 (768)
T 3rgz_A 52 VTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKF 130 (768)
T ss_dssp EEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCE
T ss_pred EEEEECCCCCcCCccCccChhHhccCcccccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCE
Confidence 67788887777555 7777788888888888877765 4667788888888888888888777777 7888888888
Q ss_pred EeccccCCCCcccccc-ccchhhhHHhhhhccccCCChhh---hcccccchhhhcCCCccccCCCCccccCCCCCceecc
Q 043053 77 LILNSNQLTGKIPVEL-SNCKSLRKLLLFDNALAGNIPAE---LGRLSNLEEMRAGGNKDIVGKIPAELGDCSNMTALGL 152 (1058)
Q Consensus 77 L~L~~n~~~~~~p~~l-~~l~~L~~L~L~~n~~~~~~p~~---l~~l~~L~~L~l~~~~~~~~~l~~~l~~l~~L~~L~l 152 (1058)
|+|++|++.+.+|..+ .++++|++|+|++|.+.+..|.. ++++++|++|++++|. +.+..+ ++.+++|++|++
T Consensus 131 L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~-l~~~~~--~~~l~~L~~L~L 207 (768)
T 3rgz_A 131 LNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNK-ISGDVD--VSRCVNLEFLDV 207 (768)
T ss_dssp EECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSE-EESCCB--CTTCTTCCEEEC
T ss_pred EECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCc-ccccCC--cccCCcCCEEEC
Confidence 8888887777777665 77888888888888877666665 6777777777777775 222222 366777777777
Q ss_pred cCccccccCCccccCCCccceeeeeccccccccCccccCCCCccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCC
Q 043053 153 ADTQVSGSLPASLGKLSKLQTLSIYTTMISGEIPAEIGNCSELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGA 232 (1058)
Q Consensus 153 ~~~~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 232 (1058)
++|.+.+..|. ++++++|++|++++|.+++.+|..++++++|++|+|++|.+.+.+|.. .+++|++|+|++|.+.+.
T Consensus 208 s~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ 284 (768)
T 3rgz_A 208 SSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGE 284 (768)
T ss_dssp CSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEES
T ss_pred cCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCc
Confidence 77777765555 777777777777777777777777777777777777777776655544 667777777777777766
Q ss_pred CCccccCc-CCccEEEeecCCCcCcCCccccccCCcceeecccCccCCCcccc-ccccccchhhhhcCCcccCcCCCccc
Q 043053 233 IPEEIGNC-TSLKMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPAN-LANATNLVQLQLDTNQISGLIPPEIG 310 (1058)
Q Consensus 233 ~~~~l~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~L~~N~i~~~~~~~~~ 310 (1058)
+|..+..+ ++|++|+|++|.+++.+|..|+.+++|++|++++|.+.+.+|.. +..+++|++|+|++|++++..|..+.
T Consensus 285 ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~ 364 (768)
T 3rgz_A 285 IPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLT 364 (768)
T ss_dssp CCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHH
T ss_pred cCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHH
Confidence 66666554 77777777777777777777777777777777777776555543 67777777777777777766777777
Q ss_pred ccc-hhhhhhccCcccCCCCChhhhc--cCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCC
Q 043053 311 MLS-KLTVFFAWQNQLEGSIPSTLAS--CSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSL 387 (1058)
Q Consensus 311 ~l~-~L~~L~l~~N~l~~~~~~~~~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 387 (1058)
.++ +|++|++++|++++.++..+.. +++|++|++++|++++.+|..+..+++|++|+|++|.+++..|..|+++++|
T Consensus 365 ~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 444 (768)
T 3rgz_A 365 NLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKL 444 (768)
T ss_dssp HHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTC
T ss_pred hhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCC
Confidence 665 6777777777776666666655 6667777777777776666667777777777777777766667677777777
Q ss_pred cEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCC
Q 043053 388 VRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDN 467 (1058)
Q Consensus 388 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N 467 (1058)
+.|++++|++++..|..|..+++|++|+|++|++++..|..+..+++|+.|+|++|++++.+|.+|+.+++|++|+|++|
T Consensus 445 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 524 (768)
T 3rgz_A 445 RDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN 524 (768)
T ss_dssp CEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS
T ss_pred CEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCC
Confidence 77777777777666667777777777777777777666777777777777777777777667777777777777777777
Q ss_pred ccccCCcccccccccccccccccccCCCCCCC------------------------------------------------
Q 043053 468 RFSGQIPASLGRLVSLNKIILSKNLFSGPIPS------------------------------------------------ 499 (1058)
Q Consensus 468 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~------------------------------------------------ 499 (1058)
++++.+|..+..+++|+.|+|++|++++.+|.
T Consensus 525 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 604 (768)
T 3rgz_A 525 SFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQL 604 (768)
T ss_dssp CCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGG
T ss_pred cccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhh
Confidence 77766777777777777777777766655553
Q ss_pred ----------------------cccCCcccccccccCCcccCCCChhhhhhHHHHHHHhhccCCCCCCCCcccccccccc
Q 043053 500 ----------------------SLGLCSSLQLLDLSSNQLTGSVPMELGQIEALEIALNLSCNGLTGPIPAQISALNKLS 557 (1058)
Q Consensus 500 ----------------------~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l~~L~ 557 (1058)
.+..+++|+.|||++|+++|.+|..++.+..++ .|+|++|+++|.+|..|+++++|+
T Consensus 605 ~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~-~L~Ls~N~l~g~ip~~l~~L~~L~ 683 (768)
T 3rgz_A 605 NRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLF-ILNLGHNDISGSIPDEVGDLRGLN 683 (768)
T ss_dssp GGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCC-EEECCSSCCCSCCCGGGGGCTTCC
T ss_pred hccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCC-EEeCcCCccCCCCChHHhCCCCCC
Confidence 455568899999999999999999999999887 599999999999999999999999
Q ss_pred EEecCCCcccCCC-CcccccCcceeEEEecccccccCCCccccccCCCccccCCcccccCCCCCCcccC
Q 043053 558 ILDLSHNKLEGNL-NPLAQLDNLVSLNISYNKFTGYLPDNKLFRQLSPTDLAGNEGLCSSRKDSCFLSN 625 (1058)
Q Consensus 558 ~L~L~~N~l~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~~~~~~~ 625 (1058)
.|||++|+++|.+ ..+..+++|++||+++|+++|.+|...+|+.+...++.|||++||.|...|...+
T Consensus 684 ~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~~~ 752 (768)
T 3rgz_A 684 ILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPSN 752 (768)
T ss_dssp EEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCSCC
T ss_pred EEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCCCc
Confidence 9999999999865 6789999999999999999999999999999999999999999999988887543
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=5.5e-70 Score=682.67 Aligned_cols=568 Identities=33% Similarity=0.522 Sum_probs=526.4
Q ss_pred CCCccccCCCCCcEEEccCCcCCCCCCC--CCCCCCcccEEecCCCCCCCCCChhh-cCcccCCEEeccccCCCCccccc
Q 043053 15 PIPTNLSSFKHLQTLVISDANLTGSIPF--DIGDCVGLIVLDFSSNNLVGTLPSSL-GKLHNLEELILNSNQLTGKIPVE 91 (1058)
Q Consensus 15 ~~p~~~~~~~~L~~L~l~~~~~~~~~p~--~l~~l~~L~~L~l~~~~i~~~lp~~l-~~l~~L~~L~L~~n~~~~~~p~~ 91 (1058)
++|..++++++|++|+|++|.+.|.+|. .++.|++|++|+|++|.+++.+|..+ .++++|++|+|++|++.+..|..
T Consensus 91 ~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 170 (768)
T 3rgz_A 91 GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVG 170 (768)
T ss_dssp ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHH
T ss_pred CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChh
Confidence 4668899999999999999999988998 89999999999999999998888877 89999999999999999878877
Q ss_pred ---cccchhhhHHhhhhccccCCChhhhcccccchhhhcCCCccccCCCCccccCCCCCceecccCccccccCCccccCC
Q 043053 92 ---LSNCKSLRKLLLFDNALAGNIPAELGRLSNLEEMRAGGNKDIVGKIPAELGDCSNMTALGLADTQVSGSLPASLGKL 168 (1058)
Q Consensus 92 ---l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l 168 (1058)
+.++++|++|++++|.+.+..|. +++++|++|++++|. +.+.+|. ++.+++|++|++++|.+.+..|..++++
T Consensus 171 ~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~-l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l 246 (768)
T 3rgz_A 171 WVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNN-FSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTC 246 (768)
T ss_dssp HHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSC-CCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTC
T ss_pred hhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCc-CCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcC
Confidence 88999999999999999876654 889999999999997 3344555 9999999999999999999999999999
Q ss_pred CccceeeeeccccccccCccccCCCCccEEEccCCcCCCCCCCCcCCC-CCcceeecccccccCCCCccccCcCCccEEE
Q 043053 169 SKLQTLSIYTTMISGEIPAEIGNCSELVSLFLYENSLSGSIPPEIGKL-KKLEELFLWQNSLVGAIPEEIGNCTSLKMID 247 (1058)
Q Consensus 169 ~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 247 (1058)
++|++|++++|.+.+.+|.. .+++|++|+|++|.+++.+|..+..+ ++|++|+|++|.+.+..|..|+++++|++|+
T Consensus 247 ~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 324 (768)
T 3rgz_A 247 TELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLA 324 (768)
T ss_dssp SSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEE
T ss_pred CCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEE
Confidence 99999999999999887765 89999999999999998899888775 9999999999999999999999999999999
Q ss_pred eecCCCcCcCCcc-ccccCCcceeecccCccCCCccccccccc-cchhhhhcCCcccCcCCCcccc--cchhhhhhccCc
Q 043053 248 FSLNSLSGTIPLS-IGGLSELEEFMISDNNVSGSIPANLANAT-NLVQLQLDTNQISGLIPPEIGM--LSKLTVFFAWQN 323 (1058)
Q Consensus 248 L~~n~l~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~--l~~L~~L~l~~N 323 (1058)
+++|.+.+.+|.. ++.+++|++|++++|.+.+..|..+..++ +|+.|++++|++++..|..+.. +++|++|++++|
T Consensus 325 L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n 404 (768)
T 3rgz_A 325 LSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNN 404 (768)
T ss_dssp CCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSS
T ss_pred CCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCC
Confidence 9999999888865 89999999999999999988999999987 9999999999999988888877 889999999999
Q ss_pred ccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccc
Q 043053 324 QLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPR 403 (1058)
Q Consensus 324 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 403 (1058)
++++.+|..|..+++|+.|++++|++++..|..+..+++|++|++++|.+++.+|..+..+++|++|+|++|++++..|.
T Consensus 405 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 484 (768)
T 3rgz_A 405 GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPS 484 (768)
T ss_dssp EEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCG
T ss_pred ccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccc------
Q 043053 404 EIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASL------ 477 (1058)
Q Consensus 404 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~------ 477 (1058)
.|..+++|++|+|++|++++.+|..++.+++|+.|+|++|++++.+|..++.+++|++|++++|+++|.+|..+
T Consensus 485 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~ 564 (768)
T 3rgz_A 485 GLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK 564 (768)
T ss_dssp GGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTC
T ss_pred HHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999988777543
Q ss_pred ----------------------------------------------------------------cccccccccccccccC
Q 043053 478 ----------------------------------------------------------------GRLVSLNKIILSKNLF 493 (1058)
Q Consensus 478 ----------------------------------------------------------------~~l~~L~~L~Ls~N~l 493 (1058)
..+.+|+.|+|++|++
T Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l 644 (768)
T 3rgz_A 565 IAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNML 644 (768)
T ss_dssp BCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCC
T ss_pred hhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcc
Confidence 3356789999999999
Q ss_pred CCCCCCcccCCcccccccccCCcccCCCChhhhhhHHHHHHHhhccCCCCCCCCccccccccccEEecCCCcccCCCCcc
Q 043053 494 SGPIPSSLGLCSSLQLLDLSSNQLTGSVPMELGQIEALEIALNLSCNGLTGPIPAQISALNKLSILDLSHNKLEGNLNPL 573 (1058)
Q Consensus 494 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 573 (1058)
+|.+|..|+.+++|+.|+|++|+++|.+|..++.+..++ .|+|++|+++|.+|..|..+++|++|||++|+|+|.++..
T Consensus 645 ~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~-~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~ 723 (768)
T 3rgz_A 645 SGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN-ILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723 (768)
T ss_dssp BSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCC-EEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS
T ss_pred cccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCC-EEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc
Confidence 999999999999999999999999999999999999987 5999999999999999999999999999999999988766
Q ss_pred cccCcceeEEEecccc
Q 043053 574 AQLDNLVSLNISYNKF 589 (1058)
Q Consensus 574 ~~l~~L~~L~l~~N~l 589 (1058)
..+..+....+.+|+.
T Consensus 724 ~~~~~~~~~~~~gN~~ 739 (768)
T 3rgz_A 724 GQFETFPPAKFLNNPG 739 (768)
T ss_dssp SSGGGSCGGGGCSCTE
T ss_pred hhhccCCHHHhcCCch
Confidence 6666666666778864
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=6.5e-62 Score=604.56 Aligned_cols=585 Identities=23% Similarity=0.217 Sum_probs=398.8
Q ss_pred cEEEccCCcCCCCCCCCCCCCCcccEEecCCCCCCCCCChhhcCcccCCEEeccccCCCCccccccccchhhhHHhhhhc
Q 043053 27 QTLVISDANLTGSIPFDIGDCVGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNSNQLTGKIPVELSNCKSLRKLLLFDN 106 (1058)
Q Consensus 27 ~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~L~~n 106 (1058)
+.+++++++++ .+|..+. .+|++|+|++|++++..+..++++++|++|+|++|++.+..|..|+++++|++|+|++|
T Consensus 7 ~~~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 7 EVADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp SEEECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred CeeECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 45667777666 5666554 56777777777776444456777777777777777776666666777777777777777
Q ss_pred cccCCCh-hhhcccccchhhhcCCCccccCCCC-ccccCCCCCceecccCccccccCCccccCCCccceeeeeccccccc
Q 043053 107 ALAGNIP-AELGRLSNLEEMRAGGNKDIVGKIP-AELGDCSNMTALGLADTQVSGSLPASLGKLSKLQTLSIYTTMISGE 184 (1058)
Q Consensus 107 ~~~~~~p-~~l~~l~~L~~L~l~~~~~~~~~l~-~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~i~~~ 184 (1058)
.+. .+| ..++++++|++|++++|. +..++ ..++.+++|++|++++|.+.+..|..++++++|++|++++|.+++.
T Consensus 84 ~l~-~l~~~~~~~l~~L~~L~L~~n~--l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 160 (680)
T 1ziw_A 84 ELS-QLSDKTFAFCTNLTELHLMSNS--IQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQAL 160 (680)
T ss_dssp CCC-CCCTTTTTTCTTCSEEECCSSC--CCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCB
T ss_pred ccC-ccChhhhccCCCCCEEECCCCc--cCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCccccc
Confidence 766 444 357777777777777765 33333 4566777777777777777766666777777777777777777655
Q ss_pred cCcccc--CCCCccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCcccc---CcCCccEEEeecCCCcCcCCc
Q 043053 185 IPAEIG--NCSELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIG---NCTSLKMIDFSLNSLSGTIPL 259 (1058)
Q Consensus 185 ~~~~l~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~---~l~~L~~L~L~~n~l~~~~~~ 259 (1058)
.+..+. .+++|++|++++|.+++..|..|..+++|+.|++++|.+.......+. ..++|+.|++++|.+.+..+.
T Consensus 161 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~ 240 (680)
T 1ziw_A 161 KSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNT 240 (680)
T ss_dssp CHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTT
T ss_pred CHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChh
Confidence 554443 456777777777777766666777777777777776665422111111 235677777777777766666
Q ss_pred cccccCC--cceeecccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCC-----CCC--
Q 043053 260 SIGGLSE--LEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEG-----SIP-- 330 (1058)
Q Consensus 260 ~~~~l~~--L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~-----~~~-- 330 (1058)
.|.+++. |++|++++|.+.+..+..|..+++|++|+|++|++.+..+..|..+++|+.|++.+|...+ .+|
T Consensus 241 ~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i 320 (680)
T 1ziw_A 241 TFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKI 320 (680)
T ss_dssp TTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEE
T ss_pred HhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhccccccccccc
Confidence 6666644 7777777777776666667777777777777777777777777777777777776654432 112
Q ss_pred --hhhhccCcccccccccccccccCcccccccccchhhhccccCCCC--CCCCCccCC--CCCcEEEccCccccCCcccc
Q 043053 331 --STLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISG--SIPPEIGNC--SSLVRLRVGNNRIAGLIPRE 404 (1058)
Q Consensus 331 --~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~ 404 (1058)
..|..+++|++|++++|++.+..+..|..+++|++|++++|.+.. .....|..+ ++|+.|++++|+++++.|..
T Consensus 321 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~ 400 (680)
T 1ziw_A 321 DDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDA 400 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTT
T ss_pred ChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhh
Confidence 256677777777777777777666667777777777777776432 222233332 46777777777777777777
Q ss_pred ccCccccceeeccCccCCCCCC-CcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccc--cCCcccccccc
Q 043053 405 IGGLKTLNFLDLSSNRLSGSVP-DEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFS--GQIPASLGRLV 481 (1058)
Q Consensus 405 ~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~ 481 (1058)
|..+++|++|+|++|.+++.+| ..|..+++|+.|++++|++++..+..|..+++|+.|++++|.++ +..|..|..++
T Consensus 401 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~ 480 (680)
T 1ziw_A 401 FSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLR 480 (680)
T ss_dssp TTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCT
T ss_pred hhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCC
Confidence 7777777777777777765444 56777777777777777777777777777777777777777765 45667777777
Q ss_pred cccccccccccCCCCCCCcccCCcccccccccCCcccCCCC--------hhhhhhHHHHHHHhhccCCCCCCCCcccccc
Q 043053 482 SLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVP--------MELGQIEALEIALNLSCNGLTGPIPAQISAL 553 (1058)
Q Consensus 482 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p--------~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l 553 (1058)
+|+.|+|++|++++..+..|..+++|++|++++|++++..+ ..+..+..++ .|++++|+++.+.+..|.++
T Consensus 481 ~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~-~L~L~~N~l~~i~~~~~~~l 559 (680)
T 1ziw_A 481 NLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLH-ILNLESNGFDEIPVEVFKDL 559 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCC-EEECCSSCCCCCCTTTTTTC
T ss_pred CCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCC-EEECCCCCCCCCCHHHcccc
Confidence 77777777777777666777777777777777777764321 1245555554 37777777776666677888
Q ss_pred ccccEEecCCCcccCCCC-cccccCcceeEEEecccccccCCCcc--ccccCCCccccCCcccccCCC
Q 043053 554 NKLSILDLSHNKLEGNLN-PLAQLDNLVSLNISYNKFTGYLPDNK--LFRQLSPTDLAGNEGLCSSRK 618 (1058)
Q Consensus 554 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~~~~~--~~~~~~~~~~~~n~~~c~~~~ 618 (1058)
++|+.|||++|+|++.++ .+..+++|+.|++++|++++..|... .+..+...++.+|||.|+|+.
T Consensus 560 ~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 560 FELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred cCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 888888888888887664 35678888888888888887666532 467777888888888888763
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=4.3e-62 Score=606.16 Aligned_cols=590 Identities=21% Similarity=0.215 Sum_probs=504.3
Q ss_pred eeEeecCCCCCCCCCccccCCCCCcEEEccCCcCCCCCCCCCCCCCcccEEecCCCCCCCCCChhhcCcccCCEEecccc
Q 043053 3 TEITIQSVPLQLPIPTNLSSFKHLQTLVISDANLTGSIPFDIGDCVGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNSN 82 (1058)
Q Consensus 3 ~~~~~~~~~~~~~~p~~~~~~~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n 82 (1058)
+...+..||. .+| +++++|+|++|++++..+..++++++|++|+|++|.+++..|..++++++|++|+|++|
T Consensus 12 s~~~L~~ip~--~~~------~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 12 SHLKLTQVPD--DLP------TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp CSSCCSSCCS--CSC------TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred CCCCcccccc--ccC------CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 3445555655 333 68999999999999656667999999999999999999888999999999999999999
Q ss_pred CCCCccccccccchhhhHHhhhhccccCCChhhhcccccchhhhcCCCccccCCCCccccCCCCCceecccCccccccCC
Q 043053 83 QLTGKIPVELSNCKSLRKLLLFDNALAGNIPAELGRLSNLEEMRAGGNKDIVGKIPAELGDCSNMTALGLADTQVSGSLP 162 (1058)
Q Consensus 83 ~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~~~~ 162 (1058)
++.+..+..|+++++|++|++++|.+.+..|..++++++|++|++++|. +.+..|..++.+++|++|++++|.+.+..+
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 162 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNG-LSSTKLGTQVQLENLQELLLSNNKIQALKS 162 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSC-CSCCCCCSSSCCTTCCEEECCSSCCCCBCH
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCc-ccccCchhhcccccCCEEEccCCcccccCH
Confidence 9985444579999999999999999986556889999999999999997 345567778999999999999999987777
Q ss_pred cccc--CCCccceeeeeccccccccCccccCCCCccEEEccCCcCCCCCCCCcC---CCCCcceeecccccccCCCCccc
Q 043053 163 ASLG--KLSKLQTLSIYTTMISGEIPAEIGNCSELVSLFLYENSLSGSIPPEIG---KLKKLEELFLWQNSLVGAIPEEI 237 (1058)
Q Consensus 163 ~~l~--~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~---~l~~L~~L~L~~n~l~~~~~~~l 237 (1058)
..++ .+++|+.|++++|.+.+..|..+..+.+|+.|++.+|.+.+.....+. ..++|+.|++++|.+.+..+..|
T Consensus 163 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~ 242 (680)
T 1ziw_A 163 EELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTF 242 (680)
T ss_dssp HHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTT
T ss_pred HHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHh
Confidence 6654 568999999999999998999999999999999999887532221111 34789999999999998888888
Q ss_pred cCcCC--ccEEEeecCCCcCcCCccccccCCcceeecccCccCCCccccccccccchhhhhcCCcccC---------cCC
Q 043053 238 GNCTS--LKMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISG---------LIP 306 (1058)
Q Consensus 238 ~~l~~--L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~---------~~~ 306 (1058)
..++. |++|+|++|++++..+..|+.+++|++|++++|.+.+..+..|..+++|+.|++++|...+ +..
T Consensus 243 ~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~ 322 (680)
T 1ziw_A 243 LGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDD 322 (680)
T ss_dssp GGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECT
T ss_pred hccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccCh
Confidence 88865 9999999999998888889999999999999999998888999999999999999875542 233
Q ss_pred CcccccchhhhhhccCcccCCCCChhhhccCcccccccccccccc--cCccccccc--ccchhhhccccCCCCCCCCCcc
Q 043053 307 PEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTA--SVPAGLFQL--QNLTKLLLISNDISGSIPPEIG 382 (1058)
Q Consensus 307 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~ 382 (1058)
..|..+++|++|++++|++++..+..|..+++|++|++++|.+.. .....|..+ ++|+.|++++|++++..|..|.
T Consensus 323 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~ 402 (680)
T 1ziw_A 323 FSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFS 402 (680)
T ss_dssp TTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTT
T ss_pred hhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhh
Confidence 478899999999999999999989999999999999999998542 222233333 5899999999999998899999
Q ss_pred CCCCCcEEEccCccccCCc-cccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccC--CCCccccccCCCC
Q 043053 383 NCSSLVRLRVGNNRIAGLI-PREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQ--GSLPNSLSSLSGL 459 (1058)
Q Consensus 383 ~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~--~~~~~~~~~l~~L 459 (1058)
.+++|+.|+|++|.+++.. +..|.++++|++|++++|++.+..+..|..+++|+.|++++|.++ +..|..|.++++|
T Consensus 403 ~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L 482 (680)
T 1ziw_A 403 WLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNL 482 (680)
T ss_dssp TCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTC
T ss_pred CCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCC
Confidence 9999999999999998644 478999999999999999999888999999999999999999987 5688899999999
Q ss_pred CeeecCCCccccCCcccccccccccccccccccCCCCCC--------CcccCCcccccccccCCcccCCCChhhhhhHHH
Q 043053 460 QVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIP--------SSLGLCSSLQLLDLSSNQLTGSVPMELGQIEAL 531 (1058)
Q Consensus 460 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--------~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l 531 (1058)
++|++++|++++..+..|..+++|+.|+|++|++++..+ ..|..+++|+.|++++|+++...+..|..+..+
T Consensus 483 ~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L 562 (680)
T 1ziw_A 483 TILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFEL 562 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCc
Confidence 999999999998888889999999999999999986422 347889999999999999995444568888887
Q ss_pred HHHHhhccCCCCCCCCccccccccccEEecCCCcccCCCCc-cc-ccCcceeEEEecccccccCCC-ccccccC
Q 043053 532 EIALNLSCNGLTGPIPAQISALNKLSILDLSHNKLEGNLNP-LA-QLDNLVSLNISYNKFTGYLPD-NKLFRQL 602 (1058)
Q Consensus 532 ~~~l~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~-~l~~L~~L~l~~N~l~~~~~~-~~~~~~~ 602 (1058)
+ .|++++|++++..+..|.++++|+.|+|++|+|++.++. +. .+++|+.|++++|+|.|.|+. .+...++
T Consensus 563 ~-~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~~~~~~~~~ 635 (680)
T 1ziw_A 563 K-IIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWI 635 (680)
T ss_dssp C-EEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCCCSSEECCS
T ss_pred c-eeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCccHHHHHHHH
Confidence 6 499999999998889999999999999999999998754 44 689999999999999999985 4433343
No 5
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-55 Score=557.62 Aligned_cols=530 Identities=22% Similarity=0.190 Sum_probs=295.8
Q ss_pred EEEccCCcCCCCCCCCCCCCCcccEEecCCCCCCCCCChhhcCcccCCEEeccccCCCCcc-ccccccchhhhHHhhhhc
Q 043053 28 TLVISDANLTGSIPFDIGDCVGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNSNQLTGKI-PVELSNCKSLRKLLLFDN 106 (1058)
Q Consensus 28 ~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n~~~~~~-p~~l~~l~~L~~L~L~~n 106 (1058)
..+.++++++ .+|. -.++|++|+|++|.|++..|.++.++++|++|+|++|...+.+ |..|+++++|++|+|++|
T Consensus 8 ~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 8 IAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 3444444444 3443 2344555555555555444445555555555555555333333 444555555555555555
Q ss_pred cccCCChhhhcccccchhhhcCCCccccCCCCcc--ccCCCCCceecccCccccccCC-ccccCCCccceeeeecccccc
Q 043053 107 ALAGNIPAELGRLSNLEEMRAGGNKDIVGKIPAE--LGDCSNMTALGLADTQVSGSLP-ASLGKLSKLQTLSIYTTMISG 183 (1058)
Q Consensus 107 ~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~l~~~--l~~l~~L~~L~l~~~~~~~~~~-~~l~~l~~L~~L~l~~n~i~~ 183 (1058)
.+.+..|..++++++|++|++++|. +.+.+|.. ++.+++|++|++++|.+.+..+ ..|+++++|++|++++|.+.+
T Consensus 84 ~l~~~~p~~~~~l~~L~~L~Ls~n~-l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~ 162 (844)
T 3j0a_A 84 KIYFLHPDAFQGLFHLFELRLYFCG-LSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFL 162 (844)
T ss_dssp CCCEECTTSSCSCSSCCCEECTTCC-CSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCC
T ss_pred cCcccCHhHccCCcccCEeeCcCCC-CCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCe
Confidence 5544344455555555555555443 12223332 5555555555555555554333 345566666666666666655
Q ss_pred ccCccccCC--CCccEEEccCCcCCCCCCCCcCCCCC------cceeecccccccCCCCccccCc---CCccEEEeecC-
Q 043053 184 EIPAEIGNC--SELVSLFLYENSLSGSIPPEIGKLKK------LEELFLWQNSLVGAIPEEIGNC---TSLKMIDFSLN- 251 (1058)
Q Consensus 184 ~~~~~l~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~------L~~L~L~~n~l~~~~~~~l~~l---~~L~~L~L~~n- 251 (1058)
..+..+..+ ++|+.|+|++|.+.+..|..++.+.+ |+.|++++|.+.+..+..+... ++++.|+++.+
T Consensus 163 ~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~ 242 (844)
T 3j0a_A 163 VCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHI 242 (844)
T ss_dssp CCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSC
T ss_pred eCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccc
Confidence 555555555 55666666666665555555544443 6666666665555555444322 34555555422
Q ss_pred --------CCcCcCCcccccc--CCcceeecccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhcc
Q 043053 252 --------SLSGTIPLSIGGL--SELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAW 321 (1058)
Q Consensus 252 --------~l~~~~~~~~~~l--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~ 321 (1058)
.+.+.....|.++ ++|+.|++++|.+.+..+..|..+++|+.|+|++|+|+++.+..|..+++|++|+++
T Consensus 243 ~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls 322 (844)
T 3j0a_A 243 MGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLS 322 (844)
T ss_dssp CBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEE
T ss_pred ccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECC
Confidence 2222222333332 456666666666655555555666666666666666665555556666666666666
Q ss_pred CcccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCc
Q 043053 322 QNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLI 401 (1058)
Q Consensus 322 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 401 (1058)
+|++++..+..|..+++|+.|++++|++....+..|..+++|++|+|++|.+++. ..+++|+.|++++|+++.+
T Consensus 323 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~~l- 396 (844)
T 3j0a_A 323 YNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLVTL- 396 (844)
T ss_dssp SCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCCCC-
T ss_pred CCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcccc-
Confidence 6666555555666666666666666666554455555566666666666665532 2255566666666666543
Q ss_pred cccccCccccceeeccCccCCCCCC-CcccCCcccchhhccCCccCCCCcc-ccccCCCCCeeecCCCccc-----cCCc
Q 043053 402 PREIGGLKTLNFLDLSSNRLSGSVP-DEIGDCTELQMIDLSHNTLQGSLPN-SLSSLSGLQVLDVSDNRFS-----GQIP 474 (1058)
Q Consensus 402 ~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~-----~~~~ 474 (1058)
|.. ..+++.|++++|++++... ..+..+++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..+
T Consensus 397 ~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~ 473 (844)
T 3j0a_A 397 PKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCW 473 (844)
T ss_dssp CCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCS
T ss_pred ccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccch
Confidence 211 3456666666666654321 1233556666666666666543322 3444566666666666665 2333
Q ss_pred ccccccccccccccccccCCCCCCCcccCCcccccccccCCcccCCCChhhhhhHHHHHHHhhccCCCCCCCCccccccc
Q 043053 475 ASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVPMELGQIEALEIALNLSCNGLTGPIPAQISALN 554 (1058)
Q Consensus 475 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l~ 554 (1058)
..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++ ..+..+. +
T Consensus 474 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-------------------------l~~~~~~--~ 526 (844)
T 3j0a_A 474 DVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTV-------------------------LSHNDLP--A 526 (844)
T ss_dssp SCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSS-------------------------CCCCCCC--S
T ss_pred hhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCc-------------------------cChhhhh--c
Confidence 456666666666666666666666666666666666666666664 3333333 7
Q ss_pred cccEEecCCCcccCCCCcccccCcceeEEEecccccccCCCccccc
Q 043053 555 KLSILDLSHNKLEGNLNPLAQLDNLVSLNISYNKFTGYLPDNKLFR 600 (1058)
Q Consensus 555 ~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~ 600 (1058)
+|+.|||++|+|++.++.. +.+|+.|++++|+|.|.|+..+...
T Consensus 527 ~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~~~~f~~ 570 (844)
T 3j0a_A 527 NLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICECELSTFIN 570 (844)
T ss_dssp CCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSSCCSHHH
T ss_pred cccEEECCCCcCCCCChhH--hCCcCEEEecCCCcccccccHHHHH
Confidence 8999999999999876543 4588999999999999998654333
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.6e-56 Score=546.72 Aligned_cols=541 Identities=21% Similarity=0.199 Sum_probs=386.1
Q ss_pred CcEEEccCCcCCCCCCCCCCCCCcccEEecCCCCCCCCCChhhcCcccCCEEeccccCCCCccccccccchhhhHHhhhh
Q 043053 26 LQTLVISDANLTGSIPFDIGDCVGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNSNQLTGKIPVELSNCKSLRKLLLFD 105 (1058)
Q Consensus 26 L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~L~~ 105 (1058)
-++++.++..++ .+|..+.. ++++|+|++|.|++..|.+++++++|++|+|++|++.+..|..|+++++|++|+|++
T Consensus 14 ~~~~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~ 90 (606)
T 3t6q_A 14 NKTYNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTA 90 (606)
T ss_dssp TTEEECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CceEECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCC
Confidence 346677777766 67766644 577777777777755566777777777777777777766677777777777777777
Q ss_pred ccccCCChhhhcccccchhhhcCCCccccCCC-CccccCCCCCceecccCccccccCCccccCCCccceeeeeccccccc
Q 043053 106 NALAGNIPAELGRLSNLEEMRAGGNKDIVGKI-PAELGDCSNMTALGLADTQVSGSLPASLGKLSKLQTLSIYTTMISGE 184 (1058)
Q Consensus 106 n~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~l-~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~i~~~ 184 (1058)
|.+.+..|..++++++|++|++++|. +..+ +..++.+++|++|++++|++.+..+..+..+++|++|++++|.+++.
T Consensus 91 n~l~~~~~~~~~~l~~L~~L~L~~n~--i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 168 (606)
T 3t6q_A 91 NPLIFMAETALSGPKALKHLFFIQTG--ISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYL 168 (606)
T ss_dssp CCCSEECTTTTSSCTTCCEEECTTSC--CSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEE
T ss_pred CcccccChhhhcccccccEeeccccC--cccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCccccc
Confidence 77775566777777777777777776 3333 45677778888888888877754444455588888888888888777
Q ss_pred cCccccCCCCcc--EEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEeecCCCc-----CcC
Q 043053 185 IPAEIGNCSELV--SLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLS-----GTI 257 (1058)
Q Consensus 185 ~~~~l~~l~~L~--~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~-----~~~ 257 (1058)
.+..++.+++|+ .|++++|.+.+..|..+.. .+|+.|++++|. ..+..+..+.+++...+..+.+. ...
T Consensus 169 ~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~ 244 (606)
T 3t6q_A 169 SKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDIS 244 (606)
T ss_dssp CHHHHHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCCC
T ss_pred ChhhhhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCch---hHHHHhhhccccchhheechhhccccccccC
Confidence 677778888887 7888888887666655544 578888888775 23344555555544444333322 122
Q ss_pred CccccccC--CcceeecccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhc
Q 043053 258 PLSIGGLS--ELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLAS 335 (1058)
Q Consensus 258 ~~~~~~l~--~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 335 (1058)
+..+.++. +|+.|++++|.+.+..+..|..+++|++|++++|+++ ..|..+..+++|++|++++|++++..+..+..
T Consensus 245 ~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~ 323 (606)
T 3t6q_A 245 PAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASN 323 (606)
T ss_dssp GGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGG
T ss_pred hhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhc
Confidence 23333333 6777777777777766677777777777777777777 44666777777777777777777776777777
Q ss_pred cCcccccccccccccccCcc-cccccccchhhhccccCCCCCC--CCCccCCCCCcEEEccCccccCCccccccCccccc
Q 043053 336 CSNLQALDLSHNSLTASVPA-GLFQLQNLTKLLLISNDISGSI--PPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLN 412 (1058)
Q Consensus 336 l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 412 (1058)
+++|+.|++++|.+.+.++. .+..+++|++|++++|.+++.. +..+..+++|++|++++|++.+..|..|..+++|+
T Consensus 324 l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 403 (606)
T 3t6q_A 324 FPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLE 403 (606)
T ss_dssp CTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCS
T ss_pred cCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCC
Confidence 77777777777777654544 3667777777777777777554 66777777888888888887777777777778888
Q ss_pred eeeccCccCCCCCCC-cccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccC---Cccccccccccccccc
Q 043053 413 FLDLSSNRLSGSVPD-EIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQ---IPASLGRLVSLNKIIL 488 (1058)
Q Consensus 413 ~L~Ls~N~l~~~~~~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~~~~l~~L~~L~L 488 (1058)
+|++++|++++..+. .+..+++|+.|++++|.+++..|..|..+++|++|++++|++++. .+..+..+++|+.|+|
T Consensus 404 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~L 483 (606)
T 3t6q_A 404 LLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVL 483 (606)
T ss_dssp EEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEEC
T ss_pred eEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEEC
Confidence 888888877765543 377777888888888888777777777788888888888877652 2355777777888888
Q ss_pred ccccCCCCCCCcccCCcccccccccCCcccCCCChhhhhhHHHHHHHhhccCCCCCCCCccccccccccEEecCCCcccC
Q 043053 489 SKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVPMELGQIEALEIALNLSCNGLTGPIPAQISALNKLSILDLSHNKLEG 568 (1058)
Q Consensus 489 s~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 568 (1058)
++|++++..|..|..+++|+.|++++|++++.+ |..|..+++| .|||++|++++
T Consensus 484 s~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-------------------------~~~l~~l~~L-~L~L~~N~l~~ 537 (606)
T 3t6q_A 484 SFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSS-------------------------IEALSHLKGI-YLNLASNHISI 537 (606)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCCGGG-------------------------GGGGTTCCSC-EEECCSSCCCC
T ss_pred CCCccCccChhhhccccCCCEEECCCCccCcCC-------------------------hhHhCccccc-EEECcCCcccc
Confidence 888887777777777788888887777777544 4455677888 89999999988
Q ss_pred CCC-cccccCcceeEEEecccccccCCCccccccC
Q 043053 569 NLN-PLAQLDNLVSLNISYNKFTGYLPDNKLFRQL 602 (1058)
Q Consensus 569 ~~~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~ 602 (1058)
.++ .+..+++|+.|++++|+|+|.++..+...++
T Consensus 538 ~~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~w~ 572 (606)
T 3t6q_A 538 ILPSLLPILSQQRTINLRQNPLDCTCSNIYFLEWY 572 (606)
T ss_dssp CCGGGHHHHHTSSEEECTTCCEECSGGGHHHHHHH
T ss_pred cCHhhcccCCCCCEEeCCCCCccccCCcHHHHHHH
Confidence 664 4678888999999999999888765444443
No 7
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.2e-55 Score=538.46 Aligned_cols=505 Identities=19% Similarity=0.224 Sum_probs=346.1
Q ss_pred eeEeecCCCCCCCCCccccCCCCCcEEEccCCcCCCCCCCCCCCCCcccEEecCCCCCCCCCChhhcCcccCCEEecccc
Q 043053 3 TEITIQSVPLQLPIPTNLSSFKHLQTLVISDANLTGSIPFDIGDCVGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNSN 82 (1058)
Q Consensus 3 ~~~~~~~~~~~~~~p~~~~~~~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n 82 (1058)
+...+..||. .+|. .+++|+|++|++++..|..++++++|++|+|++|++++..|.+|+++++|++|+|++|
T Consensus 20 ~~~~l~~iP~--~l~~------~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n 91 (606)
T 3t6q_A 20 ENLGLNEIPG--TLPN------STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTAN 91 (606)
T ss_dssp TTSCCSSCCT--TSCT------TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred CCCCcccCcC--CCCC------cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCC
Confidence 3445556665 4443 6899999999999766889999999999999999999777999999999999999999
Q ss_pred CCCCccccccccchhhhHHhhhhccccCCChhhhcccccchhhhcCCCccccCCC-CccccCCCCCceecccCccccccC
Q 043053 83 QLTGKIPVELSNCKSLRKLLLFDNALAGNIPAELGRLSNLEEMRAGGNKDIVGKI-PAELGDCSNMTALGLADTQVSGSL 161 (1058)
Q Consensus 83 ~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~l-~~~l~~l~~L~~L~l~~~~~~~~~ 161 (1058)
++.+..|..|+++++|++|++++|.+.+..|..++++++|++|++++|. +..+ +..+..+++|++|++++|.+.+..
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~--l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 169 (606)
T 3t6q_A 92 PLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNH--ISSIKLPKGFPTEKLKVLDFQNNAIHYLS 169 (606)
T ss_dssp CCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSC--CCCCCCCTTCCCTTCCEEECCSSCCCEEC
T ss_pred cccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCc--ccccCcccccCCcccCEEEcccCcccccC
Confidence 9998889999999999999999999995557889999999999999998 4443 233444999999999999999888
Q ss_pred CccccCCCccc--eeeeeccccccccCccccCCCCccEEEccCCcCC--------------------------CCCCCCc
Q 043053 162 PASLGKLSKLQ--TLSIYTTMISGEIPAEIGNCSELVSLFLYENSLS--------------------------GSIPPEI 213 (1058)
Q Consensus 162 ~~~l~~l~~L~--~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~--------------------------~~~~~~~ 213 (1058)
+..++.+++|+ .|++++|.+.+..|..+.. .+|+.|++++|... ...+..+
T Consensus 170 ~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~ 248 (606)
T 3t6q_A 170 KEDMSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVF 248 (606)
T ss_dssp HHHHHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGG
T ss_pred hhhhhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHh
Confidence 89999999999 8899999999777766554 68999999988511 0011112
Q ss_pred CCCC--CcceeecccccccCCCCccccCcCCccEEEeecCCCcCcCCccccccCCcceeecccCccCCCccccccccccc
Q 043053 214 GKLK--KLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNL 291 (1058)
Q Consensus 214 ~~l~--~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 291 (1058)
..+. +|+.|++++|.+.+..+..|..+++|++|++++|+++ .+|..++++++|++|++++|.+.+..+..+..+++|
T Consensus 249 ~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 327 (606)
T 3t6q_A 249 EGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSL 327 (606)
T ss_dssp GGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTC
T ss_pred chhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcC
Confidence 2222 4566666666666555555666666666666666665 445555666666666666666665555566666666
Q ss_pred hhhhhcCCcccCcCC-CcccccchhhhhhccCcccCCCC--ChhhhccCcccccccccccccccCcccccccccchhhhc
Q 043053 292 VQLQLDTNQISGLIP-PEIGMLSKLTVFFAWQNQLEGSI--PSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLL 368 (1058)
Q Consensus 292 ~~L~L~~N~i~~~~~-~~~~~l~~L~~L~l~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 368 (1058)
++|++++|.+.+..+ ..|..+++|++|++++|++++.. +..+..+++|++|++++|++.+..|..+..+++|++|++
T Consensus 328 ~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 407 (606)
T 3t6q_A 328 THLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDL 407 (606)
T ss_dssp SEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEEC
T ss_pred CEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEEC
Confidence 666666666553333 33556666666666666665544 455566666666666666666555555556666666666
Q ss_pred cccCCCCCCCC-CccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCC---CCCCcccCCcccchhhccCCc
Q 043053 369 ISNDISGSIPP-EIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSG---SVPDEIGDCTELQMIDLSHNT 444 (1058)
Q Consensus 369 ~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~---~~~~~~~~l~~L~~L~l~~N~ 444 (1058)
++|.+.+..+. .|..+++|++|++++|.+++..|..|..+++|++|+|++|++++ ..+..+..+++|+.|++++|+
T Consensus 408 ~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~ 487 (606)
T 3t6q_A 408 AFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCD 487 (606)
T ss_dssp TTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSC
T ss_pred CCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCc
Confidence 66666554433 25566666666666666665555566666666666666666554 122445556666666666666
Q ss_pred cCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCcccCC
Q 043053 445 LQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGS 520 (1058)
Q Consensus 445 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 520 (1058)
+++..|..|.++++|++|+|++|++++..|..+..++.| .|+|++|++++..|..+..+++|+.|++++|++.+.
T Consensus 488 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 488 LSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECS
T ss_pred cCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCcccc
Confidence 665555666666666666666666665556666666666 666666666655555556666666666666666543
No 8
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.1e-55 Score=541.12 Aligned_cols=539 Identities=22% Similarity=0.224 Sum_probs=348.8
Q ss_pred CcEEEccCCcCCCCCCCCCCCCCcccEEecCCCCCCCCCChhhcCcccCCEEeccccCCCCccccccccchhhhHHhhhh
Q 043053 26 LQTLVISDANLTGSIPFDIGDCVGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNSNQLTGKIPVELSNCKSLRKLLLFD 105 (1058)
Q Consensus 26 L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~L~~ 105 (1058)
-++++.++++++ .+|..+. .+|++|+|++|++++..|..+.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 13 ~~~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~ 89 (606)
T 3vq2_A 13 NITYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTG 89 (606)
T ss_dssp TTEEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CCceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCC
Confidence 467888888887 7887665 6888999999988866666888889999999999888866677888888888888888
Q ss_pred ccccCCChhhhcccccchhhhcCCCccccCCCC-ccccCCCCCceecccCccccc-cCCccccCCCccceeeeecccccc
Q 043053 106 NALAGNIPAELGRLSNLEEMRAGGNKDIVGKIP-AELGDCSNMTALGLADTQVSG-SLPASLGKLSKLQTLSIYTTMISG 183 (1058)
Q Consensus 106 n~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~l~-~~l~~l~~L~~L~l~~~~~~~-~~~~~l~~l~~L~~L~l~~n~i~~ 183 (1058)
|.+.+..|..++++++|++|++++|. +..++ ..++.+++|++|++++|.+.+ .+|..|+++++|++|++++|.+++
T Consensus 90 n~l~~~~p~~~~~l~~L~~L~L~~n~--l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~ 167 (606)
T 3vq2_A 90 NPIQSFSPGSFSGLTSLENLVAVETK--LASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQT 167 (606)
T ss_dssp CCCCCCCTTSSTTCTTCCEEECTTSC--CCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCE
T ss_pred CcccccChhhcCCcccCCEEEccCCc--cccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCccee
Confidence 88886667788888888888888776 33443 567777788888888777764 457777778888888888777777
Q ss_pred ccCccccCCCCcc----EEEccCCcCCCCCCCCcCCCCCcceeeccccccc-CCCCccccCcCCccEEEeecCCCcCcC-
Q 043053 184 EIPAEIGNCSELV----SLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLV-GAIPEEIGNCTSLKMIDFSLNSLSGTI- 257 (1058)
Q Consensus 184 ~~~~~l~~l~~L~----~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~l~~l~~L~~L~L~~n~l~~~~- 257 (1058)
..+..++.+++|+ +|++++|.+++..+..+... +|+.|++++|.+. +..+..+.++++|+.+++..+.+.+..
T Consensus 168 ~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~ 246 (606)
T 3vq2_A 168 ITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERN 246 (606)
T ss_dssp ECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCC
T ss_pred cChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCc
Confidence 6666666665554 67888887775444444443 7778888777765 344556777777777777655443211
Q ss_pred -----CccccccC--Ccceeec-ccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCC
Q 043053 258 -----PLSIGGLS--ELEEFMI-SDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSI 329 (1058)
Q Consensus 258 -----~~~~~~l~--~L~~L~l-~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 329 (1058)
+..+.++. .++.+++ ..|.+.+..+. +..+++|+.|++++|.+..+ | .+..+++|++|++++|++ +.+
T Consensus 247 l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l-~-~l~~~~~L~~L~l~~n~l-~~l 322 (606)
T 3vq2_A 247 LEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYL-E-DVPKHFKWQSLSIIRCQL-KQF 322 (606)
T ss_dssp CSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCC-C-CCCTTCCCSEEEEESCCC-SSC
T ss_pred ccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchhh-h-hccccccCCEEEcccccC-ccc
Confidence 11111111 2344444 44455544444 55566666666666665443 2 455555555555555555 233
Q ss_pred ChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCC--CCCCccCCCCCcEEEccCccccCCccccccC
Q 043053 330 PSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGS--IPPEIGNCSSLVRLRVGNNRIAGLIPREIGG 407 (1058)
Q Consensus 330 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 407 (1058)
| .+ .+++|+.|++++|+..+.. .+..+++|++|++++|.+++. .+..+..+++|++|++++|.++++ |..|..
T Consensus 323 p-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~-~~~~~~ 397 (606)
T 3vq2_A 323 P-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIM-SANFMG 397 (606)
T ss_dssp C-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEE-CCCCTT
T ss_pred c-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccc-hhhccC
Confidence 4 23 5555555555555433222 344555555555555555533 244555555555555555555543 345555
Q ss_pred ccccceeeccCccCCCCCC-CcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCcccc-CCcccccccccccc
Q 043053 408 LKTLNFLDLSSNRLSGSVP-DEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSG-QIPASLGRLVSLNK 485 (1058)
Q Consensus 408 l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~ 485 (1058)
+++|++|++++|++.+..| ..+..+++|+.|++++|.+++..|..|.++++|++|++++|++++ .+|..|..+++|+.
T Consensus 398 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 477 (606)
T 3vq2_A 398 LEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTF 477 (606)
T ss_dssp CTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred CCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCE
Confidence 5555555555555554444 445555555555555555555555555555555555555555554 24555555555555
Q ss_pred cccccccCCCCCCCcccCCcccccccccCCcccCCCChhhhhhHHHHHHHhhccCCCCCCCCccccccccccEEecCCCc
Q 043053 486 IILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVPMELGQIEALEIALNLSCNGLTGPIPAQISALNKLSILDLSHNK 565 (1058)
Q Consensus 486 L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 565 (1058)
|+|++|++++..|..|..+++|+.|++++|+++ +..|..|.++++|+.|||++|+
T Consensus 478 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-------------------------~~~~~~~~~l~~L~~L~l~~N~ 532 (606)
T 3vq2_A 478 LDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLL-------------------------FLDSSHYNQLYSLSTLDCSFNR 532 (606)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCS-------------------------CEEGGGTTTCTTCCEEECTTSC
T ss_pred EECCCCcCCccChhhhcccccCCEEECCCCcCC-------------------------CcCHHHccCCCcCCEEECCCCc
Confidence 555555555555555555555555555555554 4556667889999999999999
Q ss_pred ccCCCCcccccC-cceeEEEecccccccCCCccccccCCC
Q 043053 566 LEGNLNPLAQLD-NLVSLNISYNKFTGYLPDNKLFRQLSP 604 (1058)
Q Consensus 566 l~~~~~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~~~~~~ 604 (1058)
|++.+..+..++ +|+.|++++|+|.|.++..+.++++..
T Consensus 533 l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~~~~~l~~ 572 (606)
T 3vq2_A 533 IETSKGILQHFPKSLAFFNLTNNSVACICEHQKFLQWVKE 572 (606)
T ss_dssp CCCEESCGGGSCTTCCEEECCSCCCCCSSTTHHHHTTTTT
T ss_pred CcccCHhHhhhcccCcEEEccCCCcccCCccHHHHHHHHc
Confidence 998777788887 599999999999999998766666543
No 9
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4.3e-54 Score=544.35 Aligned_cols=526 Identities=23% Similarity=0.234 Sum_probs=383.9
Q ss_pred cEEecCCCCCCCCCChhhcCcccCCEEeccccCCCCccccccccchhhhHHhhhhccccCCC-hhhhcccccchhhhcCC
Q 043053 51 IVLDFSSNNLVGTLPSSLGKLHNLEELILNSNQLTGKIPVELSNCKSLRKLLLFDNALAGNI-PAELGRLSNLEEMRAGG 129 (1058)
Q Consensus 51 ~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~-p~~l~~l~~L~~L~l~~ 129 (1058)
+..+.++++++ .+|. -.++|++|||++|++.+..|..|.++++|++|+|++|...+.+ |..+++|++|++|++++
T Consensus 7 ~~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~ 82 (844)
T 3j0a_A 7 RIAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82 (844)
T ss_dssp EEEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTT
T ss_pred eEEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCC
Confidence 57889999999 8897 4689999999999999778899999999999999999666566 67889999999999998
Q ss_pred CccccCCCCccccCCCCCceecccCccccccCCcc--ccCCCccceeeeeccccccccC-ccccCCCCccEEEccCCcCC
Q 043053 130 NKDIVGKIPAELGDCSNMTALGLADTQVSGSLPAS--LGKLSKLQTLSIYTTMISGEIP-AEIGNCSELVSLFLYENSLS 206 (1058)
Q Consensus 130 ~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~~~~~~--l~~l~~L~~L~l~~n~i~~~~~-~~l~~l~~L~~L~L~~n~l~ 206 (1058)
|. +....|..++.+++|++|++++|.+.+..|.. |+++++|++|++++|.+.+..+ ..++++++|++|+|++|.++
T Consensus 83 N~-l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~ 161 (844)
T 3j0a_A 83 SK-IYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIF 161 (844)
T ss_dssp CC-CCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCC
T ss_pred Cc-CcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCC
Confidence 87 33445778888999999999999888766655 8888899999999888876654 57888889999999998888
Q ss_pred CCCCCCcCCC--CCcceeecccccccCCCCccccCcCC------ccEEEeecCCCcCcCCcccccc---CCcceeecccC
Q 043053 207 GSIPPEIGKL--KKLEELFLWQNSLVGAIPEEIGNCTS------LKMIDFSLNSLSGTIPLSIGGL---SELEEFMISDN 275 (1058)
Q Consensus 207 ~~~~~~~~~l--~~L~~L~L~~n~l~~~~~~~l~~l~~------L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~l~~n 275 (1058)
+..+..+..+ ++|+.|++++|.+.+..+..++.+++ |+.|++++|.+.+..+..+... .+++.|.++.+
T Consensus 162 ~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~ 241 (844)
T 3j0a_A 162 LVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHH 241 (844)
T ss_dssp CCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSS
T ss_pred eeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccc
Confidence 7778888777 78889999988888877777766665 8888888888887777666543 56777777633
Q ss_pred ---------ccCCCcccccccc--ccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCccccccc
Q 043053 276 ---------NVSGSIPANLANA--TNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDL 344 (1058)
Q Consensus 276 ---------~l~~~~~~~~~~l--~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 344 (1058)
.+.......|..+ ++|+.|+|++|.+.+..+..|..+++|+.|++++|++++..+..|.++++|++|+|
T Consensus 242 ~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 321 (844)
T 3j0a_A 242 IMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNL 321 (844)
T ss_dssp CCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEE
T ss_pred cccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEEC
Confidence 2333333344443 56677777777776666666666667777777777666666666666666777777
Q ss_pred ccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCC
Q 043053 345 SHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGS 424 (1058)
Q Consensus 345 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 424 (1058)
++|++++..|..|..+++|++|++++|.+.+..+..|.++++|+.|+|++|.++++. .+++|+.|++++|+++ .
T Consensus 322 s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~-----~~~~L~~L~l~~N~l~-~ 395 (844)
T 3j0a_A 322 SYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIH-----FIPSIPDIFLSGNKLV-T 395 (844)
T ss_dssp ESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCS-----SCCSCSEEEEESCCCC-C
T ss_pred CCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCccc-----CCCCcchhccCCCCcc-c
Confidence 776666655666666666666666666666666666666666666666666666432 2566666666666666 3
Q ss_pred CCCcccCCcccchhhccCCccCCCCc-cccccCCCCCeeecCCCccccCCcc-cccccccccccccccccCC-----CCC
Q 043053 425 VPDEIGDCTELQMIDLSHNTLQGSLP-NSLSSLSGLQVLDVSDNRFSGQIPA-SLGRLVSLNKIILSKNLFS-----GPI 497 (1058)
Q Consensus 425 ~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~ 497 (1058)
+|.. ..+++.|++++|++++... ..+.++++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..
T Consensus 396 l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~ 472 (844)
T 3j0a_A 396 LPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELC 472 (844)
T ss_dssp CCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCC
T ss_pred cccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccc
Confidence 3332 3456666666666665321 2244666666666666666643332 3444566666666666665 333
Q ss_pred CCcccCCcccccccccCCcccCCCChhhhhhHHHHHHHhhccCCCCCCCCccccccccccEEecCCCcccCCCCcccccC
Q 043053 498 PSSLGLCSSLQLLDLSSNQLTGSVPMELGQIEALEIALNLSCNGLTGPIPAQISALNKLSILDLSHNKLEGNLNPLAQLD 577 (1058)
Q Consensus 498 ~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~ 577 (1058)
+..|..+++|+.|+|++|+|+ +..+..|.++++|+.|||++|+|++.++.... +
T Consensus 473 ~~~~~~l~~L~~L~Ls~N~l~-------------------------~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~ 526 (844)
T 3j0a_A 473 WDVFEGLSHLQVLYLNHNYLN-------------------------SLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-A 526 (844)
T ss_dssp SSCSSCBCCEECCCCCHHHHT-------------------------TCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-S
T ss_pred hhhhcCcccccEEECCCCccc-------------------------ccChhHccchhhhheeECCCCCCCccChhhhh-c
Confidence 445666666666666666665 45556678899999999999999987754443 8
Q ss_pred cceeEEEecccccccCCCccccccCCCccccCCcccccCCC
Q 043053 578 NLVSLNISYNKFTGYLPDNKLFRQLSPTDLAGNEGLCSSRK 618 (1058)
Q Consensus 578 ~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~ 618 (1058)
+|+.|++++|++++.+|.. |..+...++.+|||.|+|+.
T Consensus 527 ~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 527 NLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp CCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSSC
T ss_pred cccEEECCCCcCCCCChhH--hCCcCEEEecCCCccccccc
Confidence 9999999999999998864 67888899999999998864
No 10
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=5e-54 Score=526.38 Aligned_cols=499 Identities=20% Similarity=0.192 Sum_probs=318.9
Q ss_pred eeeEeecCCCCCCCCCccccCCCCCcEEEccCCcCCCCCCCCCCCCCcccEEecCCCCCCCCCChhhcCcccCCEEeccc
Q 043053 2 VTEITIQSVPLQLPIPTNLSSFKHLQTLVISDANLTGSIPFDIGDCVGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNS 81 (1058)
Q Consensus 2 ~~~~~~~~~~~~~~~p~~~~~~~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~ 81 (1058)
|++..+..||. .+| +++++|+|++|++++..+..++++++|++|+|++|++++..|.+++++++|++|+|++
T Consensus 18 c~~~~l~~ip~--~~~------~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~ 89 (606)
T 3vq2_A 18 CMDQKLSKVPD--DIP------SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTG 89 (606)
T ss_dssp CTTSCCSSCCT--TSC------TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred ccCCCcccCCC--CCC------CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCC
Confidence 33444555665 333 6899999999999976677899999999999999999977788999999999999999
Q ss_pred cCCCCccccccccchhhhHHhhhhccccCCChhhhcccccchhhhcCCCccccCCCCccccCCCCCceecccCccccccC
Q 043053 82 NQLTGKIPVELSNCKSLRKLLLFDNALAGNIPAELGRLSNLEEMRAGGNKDIVGKIPAELGDCSNMTALGLADTQVSGSL 161 (1058)
Q Consensus 82 n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~~~ 161 (1058)
|++.+..|..|+++++|++|++++|.+.+..|..++++++|++|++++|......+|..++++++|++|++++|++.+..
T Consensus 90 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~ 169 (606)
T 3vq2_A 90 NPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTIT 169 (606)
T ss_dssp CCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEEC
T ss_pred CcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecC
Confidence 99997779999999999999999999985555889999999999999998322368999999999999999999999888
Q ss_pred CccccCCCccc----eeeeeccccccccCccccCCCCccEEEccCCcCC-CCCCCCcCCCCCcceeecccc---------
Q 043053 162 PASLGKLSKLQ----TLSIYTTMISGEIPAEIGNCSELVSLFLYENSLS-GSIPPEIGKLKKLEELFLWQN--------- 227 (1058)
Q Consensus 162 ~~~l~~l~~L~----~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n--------- 227 (1058)
+..++.+++|+ .|++++|.+++..+..+... +|+.|++++|.+. +..|..+.+++.|+.+++..+
T Consensus 170 ~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~ 248 (606)
T 3vq2_A 170 VNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLE 248 (606)
T ss_dssp TTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCS
T ss_pred hhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCccc
Confidence 88888887776 79999999986555555544 8999999999886 345666777777777776433
Q ss_pred ------------------------cccCCCCccccCcCCccEEEeecCCCcCcCCccccccCCcceeecccCccCCCccc
Q 043053 228 ------------------------SLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPA 283 (1058)
Q Consensus 228 ------------------------~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 283 (1058)
.+.+..|. +..+++|+.|++++|.+.. +| .+..+++|++|++++|.+. .+|
T Consensus 249 ~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l~-~lp- 323 (606)
T 3vq2_A 249 IFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQLK-QFP- 323 (606)
T ss_dssp CCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCCS-SCC-
T ss_pred ccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccCc-ccc-
Confidence 33333333 4444555555555555542 22 4444555555555555552 333
Q ss_pred cccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCC--CChhhhccCcccccccccccccccCcccccccc
Q 043053 284 NLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGS--IPSTLASCSNLQALDLSHNSLTASVPAGLFQLQ 361 (1058)
Q Consensus 284 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 361 (1058)
.+ .+++|++|++++|+..+. ..+..+++|++|++++|++++. .+..+..+++|++|++++|.+.+ +|..+..++
T Consensus 324 ~~-~l~~L~~L~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~ 399 (606)
T 3vq2_A 324 TL-DLPFLKSLTLTMNKGSIS--FKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLE 399 (606)
T ss_dssp CC-CCSSCCEEEEESCSSCEE--CCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCT
T ss_pred cC-CCCccceeeccCCcCccc--hhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCC
Confidence 22 455555555555533221 1344455555555555555443 24445555555555555555542 334444455
Q ss_pred cchhhhccccCCCCCCC-CCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCC-CCCCcccCCcccchhh
Q 043053 362 NLTKLLLISNDISGSIP-PEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSG-SVPDEIGDCTELQMID 439 (1058)
Q Consensus 362 ~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~ 439 (1058)
+|++|++++|.+.+..+ ..|.++++|++|++++|++++..|..|.++++|++|++++|++++ ..|..|..+++|+.|+
T Consensus 400 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 479 (606)
T 3vq2_A 400 ELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLD 479 (606)
T ss_dssp TCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEE
Confidence 55555555555554444 344555555555555555554445555555555555555555544 2444455555555555
Q ss_pred ccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCc-ccccccccCCccc
Q 043053 440 LSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCS-SLQLLDLSSNQLT 518 (1058)
Q Consensus 440 l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~ 518 (1058)
+++|++++..|..|.++++|++|+|++|++++..|..|..+++|+.|+|++|+|+ .+|..+..++ +|+.|++++|++.
T Consensus 480 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~ 558 (606)
T 3vq2_A 480 LSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVA 558 (606)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCC
T ss_pred CCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcc
Confidence 5555555444445555555555555555555444555555555555555555554 3333344443 3555555555554
Q ss_pred C
Q 043053 519 G 519 (1058)
Q Consensus 519 ~ 519 (1058)
+
T Consensus 559 c 559 (606)
T 3vq2_A 559 C 559 (606)
T ss_dssp C
T ss_pred c
Confidence 3
No 11
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.2e-51 Score=452.81 Aligned_cols=258 Identities=26% Similarity=0.407 Sum_probs=211.4
Q ss_pred hhccccceeccccceEEEEEEe------cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCccccee
Q 043053 704 KCLVDANVIGKGCSGVVYRADM------DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFL 777 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 777 (1058)
..+.+.+.||+|+||+||+|.+ .+++.||||++... ......++|.+|+.++++++|||||+++
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~----------~~~~~~~~f~~E~~il~~l~HpNIV~l~ 95 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK----------AEGPLREEFRHEAMLRARLQHPNVVCLL 95 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-----------CCC-CHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcc----------cChHHHHHHHHHHHHHHhCCCCCCCCcc
Confidence 4567788999999999999965 35688999998533 2234468899999999999999999999
Q ss_pred eEEEcCCCceEEEEecCCCChhhhhhhcC--------------CCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCC
Q 043053 778 GCCWNRNNRLLMYDYMPNGSLGSLLHERT--------------GNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIK 843 (1058)
Q Consensus 778 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik 843 (1058)
|++.+++..++|||||++|+|.++++.+. ...++|..+.+|+.|||+||+|||+. +|||||||
T Consensus 96 g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK 172 (308)
T 4gt4_A 96 GVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLA 172 (308)
T ss_dssp EEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred eEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCcc
Confidence 99999999999999999999999996532 24689999999999999999999999 99999999
Q ss_pred CCcEEEcCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCC
Q 043053 844 ANNILIGLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTI 922 (1058)
Q Consensus 844 p~Nill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~ 922 (1058)
|+|||+++++.+||+|||+|+.....+........+||++|||||++.+..++.++|||||||++|||+| |+.||....
T Consensus 173 ~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~ 252 (308)
T 4gt4_A 173 TRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS 252 (308)
T ss_dssp GGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC
T ss_pred ccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999987765544445566789999999999999999999999999999999998 899997542
Q ss_pred CCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhh
Q 043053 923 PDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEI 987 (1058)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~ 987 (1058)
...+...+..... +. .++.+..+ +.+++.+||+.||++||||+||++.|+.+
T Consensus 253 --~~~~~~~i~~~~~-----~~---~p~~~~~~---~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 253 --NQDVVEMIRNRQV-----LP---CPDDCPAW---VYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp --HHHHHHHHHTTCC-----CC---CCTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred --HHHHHHHHHcCCC-----CC---CcccchHH---HHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 2334443333211 11 12222222 34478889999999999999999999764
No 12
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=4.4e-51 Score=445.83 Aligned_cols=263 Identities=28% Similarity=0.395 Sum_probs=203.1
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
+++.+.+.||+|+||+||+|.+. ..||||++... .......++|.+|++++++++|||||+++|++.+
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~---------~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~- 103 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVV---------DPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK- 103 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCS---------SCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEec---------CCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-
Confidence 45678899999999999999765 36999998532 1234456889999999999999999999998864
Q ss_pred CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccccc
Q 043053 784 NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLA 863 (1058)
Q Consensus 784 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~ 863 (1058)
+..|+|||||+||+|.++++.. ...++|..+.+|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|
T Consensus 104 ~~~~iVmEy~~gGsL~~~l~~~-~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla 179 (307)
T 3omv_A 104 DNLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLA 179 (307)
T ss_dssp SSCEEEEECCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSC
T ss_pred CeEEEEEEcCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCc
Confidence 5689999999999999999764 46799999999999999999999998 9999999999999999999999999999
Q ss_pred eeccCCCcccccccccCcCCccCcccccc---CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccc
Q 043053 864 KLVDDGDFARSSNTVAGSYGYIAPEYGYM---MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQV 940 (1058)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1058)
+..............+||+.|||||++.+ ..|+.++|||||||++|||+||+.||....+ ...+...+... .
T Consensus 180 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~-~~~~~~~~~~~----~ 254 (307)
T 3omv_A 180 TVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN-RDQIIFMVGRG----Y 254 (307)
T ss_dssp BC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-HHHHHHHHHTT----C
T ss_pred eecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh-HHHHHHHHhcC----C
Confidence 87655443344556789999999999864 4589999999999999999999999975432 11222222221 1
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 941 LDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
..|.....+.....+ +.+++.+||+.||++||||+||++.|+.++..
T Consensus 255 ~~p~~~~~~~~~~~~---l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 255 ASPDLSKLYKNCPKA---MKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp CCCCSTTSCTTSCHH---HHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred CCCCcccccccchHH---HHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 122222222222222 33478889999999999999999999887653
No 13
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.5e-51 Score=450.03 Aligned_cols=260 Identities=27% Similarity=0.454 Sum_probs=212.9
Q ss_pred hhccccceeccccceEEEEEEec------CCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCccccee
Q 043053 704 KCLVDANVIGKGCSGVVYRADMD------NGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFL 777 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 777 (1058)
++|.+.+.||+|+||+||+|.+. ++..||||++... .....++|.+|++++++++|||||+++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-----------~~~~~~~f~~E~~il~~l~HpnIV~l~ 81 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-----------SDNARKDFHREAELLTNLQHEHIVKFY 81 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC-----------CHHHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC-----------ChHHHHHHHHHHHHHHhCCCCCCccEE
Confidence 46888999999999999999653 4788999998522 334568899999999999999999999
Q ss_pred eEEEcCCCceEEEEecCCCChhhhhhhc-----------CCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCc
Q 043053 778 GCCWNRNNRLLMYDYMPNGSLGSLLHER-----------TGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANN 846 (1058)
Q Consensus 778 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~N 846 (1058)
|++.+++..|+|||||++|+|.++++.. ....++|..+.+|+.|||+||+|||++ +||||||||+|
T Consensus 82 g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~N 158 (299)
T 4asz_A 82 GVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRN 158 (299)
T ss_dssp EEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred EEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhh
Confidence 9999999999999999999999999753 235799999999999999999999999 99999999999
Q ss_pred EEEcCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCC
Q 043053 847 ILIGLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDG 925 (1058)
Q Consensus 847 ill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~ 925 (1058)
||+++++.+||+|||+|+.....+.........||+.|||||++.+..++.++|||||||++|||+| |+.||.... .
T Consensus 159 ILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~--~ 236 (299)
T 4asz_A 159 CLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS--N 236 (299)
T ss_dssp EEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--H
T ss_pred EEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--H
Confidence 9999999999999999987665544444455679999999999999999999999999999999999 899997542 2
Q ss_pred hhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 926 SHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
..+...+..... +..+...+ .+ +.+++.+||+.||++|||+++|.+.|+++...
T Consensus 237 ~~~~~~i~~~~~-----~~~p~~~~---~~---~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 237 NEVIECITQGRV-----LQRPRTCP---QE---VYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp HHHHHHHHHTCC-----CCCCTTCC---HH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC-----CCCCccch---HH---HHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 333333333221 11112222 22 34578889999999999999999999887654
No 14
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=5.1e-51 Score=452.15 Aligned_cols=261 Identities=28% Similarity=0.457 Sum_probs=205.9
Q ss_pred hhccccceeccccceEEEEEEec------CCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCccccee
Q 043053 704 KCLVDANVIGKGCSGVVYRADMD------NGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFL 777 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 777 (1058)
++|...++||+|+||+||+|.+. +++.||||++.. ......++|.+|++++++++|||||+++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~-----------~~~~~~~~f~~E~~il~~l~HpnIV~l~ 109 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE-----------ASESARQDFQREAELLTMLQHQHIVRFF 109 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC-----------CSHHHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc-----------CCHHHHHHHHHHHHHHHhCCCCCCCcEE
Confidence 46778899999999999999653 578999999852 2334568899999999999999999999
Q ss_pred eEEEcCCCceEEEEecCCCChhhhhhhcC-------------CCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCC
Q 043053 778 GCCWNRNNRLLMYDYMPNGSLGSLLHERT-------------GNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKA 844 (1058)
Q Consensus 778 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp 844 (1058)
|++.+++..|+|||||++|+|.++++... ..+++|.++++|+.|||+||+|||+. +||||||||
T Consensus 110 g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp 186 (329)
T 4aoj_A 110 GVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLAT 186 (329)
T ss_dssp EEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCG
T ss_pred EEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccH
Confidence 99999999999999999999999997532 34699999999999999999999998 999999999
Q ss_pred CcEEEcCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCC
Q 043053 845 NNILIGLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIP 923 (1058)
Q Consensus 845 ~Nill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~ 923 (1058)
+|||+++++.+||+|||+|+.....+........+||+.|||||++.+..++.++|||||||++|||+| |+.||....
T Consensus 187 ~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~- 265 (329)
T 4aoj_A 187 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS- 265 (329)
T ss_dssp GGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC-
T ss_pred hhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC-
Confidence 999999999999999999997765554445556789999999999999999999999999999999999 899997542
Q ss_pred CChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043053 924 DGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHER 991 (1058)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~ 991 (1058)
.......+.... .+..+...+. + +.+++.+||+.||++|||++||+++|+.+.+..
T Consensus 266 -~~~~~~~i~~g~-----~~~~p~~~~~---~---~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 266 -NTEAIDCITQGR-----ELERPRACPP---E---VYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp -HHHHHHHHHHTC-----CCCCCTTCCH---H---HHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred -HHHHHHHHHcCC-----CCCCcccccH---H---HHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 233333333322 1112222222 2 344788899999999999999999999886543
No 15
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.4e-51 Score=455.67 Aligned_cols=254 Identities=20% Similarity=0.306 Sum_probs=204.5
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|++.+.||+|+||+||+| +..+|+.||||++.... ......+.+.+|++++++++|||||++++++.+
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---------~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~ 94 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISR---------MSSKEREESRREVAVLANMKHPNIVQYRESFEE 94 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTT---------SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHH---------CCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE
Confidence 68999999999999999999 56789999999985432 223346789999999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
++..|+|||||+||+|.++++.+....+++..++.|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+
T Consensus 95 ~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGl 171 (350)
T 4b9d_A 95 NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGI 171 (350)
T ss_dssp TTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTE
T ss_pred CCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEccccc
Confidence 99999999999999999999876667789999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccccC
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVLD 942 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1058)
|+...... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||.... .......+.... .
T Consensus 172 a~~~~~~~--~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--~~~~~~~i~~~~-----~ 242 (350)
T 4b9d_A 172 ARVLNSTV--ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS--MKNLVLKIISGS-----F 242 (350)
T ss_dssp ESCCCHHH--HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHTC-----C
T ss_pred ceeecCCc--ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHHcCC-----C
Confidence 98764321 22345689999999999999999999999999999999999999997542 222222222211 1
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 943 PSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
+......+.+ +.+++.+||++||++|||++|++++-
T Consensus 243 ~~~~~~~s~~------~~~li~~~L~~dP~~R~s~~e~l~hp 278 (350)
T 4b9d_A 243 PPVSLHYSYD------LRSLVSQLFKRNPRDRPSVNSILEKG 278 (350)
T ss_dssp CCCCTTSCHH------HHHHHHHHTCSSGGGSCCHHHHHTSH
T ss_pred CCCCccCCHH------HHHHHHHHccCChhHCcCHHHHhcCH
Confidence 1122222222 34477889999999999999998753
No 16
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.4e-50 Score=437.13 Aligned_cols=253 Identities=18% Similarity=0.267 Sum_probs=210.7
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|++.+.||+|+||+||+| +..+|+.||||++.+.... .....+.+.+|++++++++|||||++++++.+
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~--------~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~ 103 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII--------KENKVPYVTRERDVMSRLDHPFFVKLYFTFQD 103 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH--------HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCC--------CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe
Confidence 57999999999999999999 5678999999999654321 22346789999999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
++..|+|||||+||+|.++++.. +.+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+
T Consensus 104 ~~~~yivmEy~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGl 178 (311)
T 4aw0_A 104 DEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGT 178 (311)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCC
Confidence 99999999999999999999864 6799999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccccC
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVLD 942 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1058)
|+..............+||+.|||||++.+..|+.++||||+||++|||++|+.||... +.......+... .
T Consensus 179 a~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--~~~~~~~~i~~~------~ 250 (311)
T 4aw0_A 179 AKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEGLIFAKIIKL------E 250 (311)
T ss_dssp CEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHT------C
T ss_pred ceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHcC------C
Confidence 99876544444556778999999999999999999999999999999999999999753 222222222221 1
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 943 PSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
..+....+. ++.+++.+||++||++|||++|+..+
T Consensus 251 ~~~p~~~s~------~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 251 YDFPEKFFP------KARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp CCCCTTCCH------HHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred CCCCcccCH------HHHHHHHHHccCCHhHCcChHHHcCC
Confidence 112222222 23457888999999999999987543
No 17
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=6.7e-50 Score=441.57 Aligned_cols=250 Identities=22% Similarity=0.337 Sum_probs=205.4
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
+.|+..+.||+|+||+||+| +..+|+.||||++... .....+.+.+|++++++++|||||++++++.+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~-----------~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~ 142 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR-----------KQQRRELLFNEVVIMRDYQHENVVEMYNSYLV 142 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGG-----------GCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecC-----------chhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE
Confidence 46888999999999999999 5568999999998533 12234668899999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
++..|+|||||+||+|.++++. ..+++..+..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+
T Consensus 143 ~~~~~ivmEy~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGl 216 (346)
T 4fih_A 143 GDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGF 216 (346)
T ss_dssp TTEEEEEECCCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred CCEEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcC
Confidence 9999999999999999999975 4689999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccccC
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVLD 942 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1058)
|+...... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||.... .......+..... ..
T Consensus 217 a~~~~~~~--~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~~~~~---~~ 289 (346)
T 4fih_A 217 CAQVSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRDNLP---PR 289 (346)
T ss_dssp CEECCSSS--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSSC---CC
T ss_pred ceecCCCC--CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHHcCCC---CC
Confidence 99775433 23456789999999999999999999999999999999999999997542 2222222222111 01
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 943 PSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
.......+. .+.+++.+||++||++|||++|++++
T Consensus 290 ~~~~~~~s~------~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 290 LKNLHKVSP------SLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp CSCGGGSCH------HHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCccccCCH------HHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111111122 23457888999999999999999875
No 18
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=9e-50 Score=439.37 Aligned_cols=256 Identities=21% Similarity=0.268 Sum_probs=204.7
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.+.|...++||+|+||+||+| +..+|+.||||++.... ...+|+.++++++|||||++++++.
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~----------------~~~~E~~il~~l~HpnIV~l~~~~~ 120 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV----------------FRVEELVACAGLSSPRIVPLYGAVR 120 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT----------------CCTHHHHTTTTCCCTTBCCEEEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH----------------hHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 357888999999999999999 55689999999985321 1247999999999999999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCC-Ceeeecc
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEF-EPYIADF 860 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~-~~kl~Df 860 (1058)
+++..|+|||||+||+|.++++.. +.+++..+..++.||+.||+|||++ +||||||||+|||++.+| .+||+||
T Consensus 121 ~~~~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DF 195 (336)
T 4g3f_A 121 EGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDF 195 (336)
T ss_dssp ETTEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCC
T ss_pred ECCEEEEEEeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeC
Confidence 999999999999999999999864 5799999999999999999999999 999999999999999998 6999999
Q ss_pred ccceeccCCCccc---ccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcC
Q 043053 861 GLAKLVDDGDFAR---SSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKG 937 (1058)
Q Consensus 861 Gl~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 937 (1058)
|+|+......... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||........ . ..+.....
T Consensus 196 Gla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~-~~i~~~~~ 273 (336)
T 4g3f_A 196 GHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-C-LKIASEPP 273 (336)
T ss_dssp TTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-H-HHHHHSCC
T ss_pred CCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-H-HHHHcCCC
Confidence 9999876533211 23456899999999999999999999999999999999999999976543321 1 11222110
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 938 IQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
.........+.. +.+++.+||++||++|||++|+++++.....+
T Consensus 274 ---~~~~~~~~~s~~------~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 274 ---PIREIPPSCAPL------TAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp ---GGGGSCTTSCHH------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CchhcCccCCHH------HHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 001122222222 23467789999999999999999988776543
No 19
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.8e-50 Score=484.92 Aligned_cols=534 Identities=20% Similarity=0.236 Sum_probs=320.4
Q ss_pred CcEEEccCCcCCCCCCCCCCCCCcccEEecCCCCCCCCCChhhcCcccCCEEeccccCCCCccccccccchhhhHHhhhh
Q 043053 26 LQTLVISDANLTGSIPFDIGDCVGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNSNQLTGKIPVELSNCKSLRKLLLFD 105 (1058)
Q Consensus 26 L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~L~~ 105 (1058)
.++.+.++.+++ .+|..+. .++++|+|++|++++..+.++.++++|++|+|++|++.+..|..|+++++|++|+|++
T Consensus 9 ~~~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 85 (570)
T 2z63_A 9 NITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTG 85 (570)
T ss_dssp TTEEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CcEEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcC
Confidence 355666776666 5776553 4677788888877755566777788888888888877755566677777777777777
Q ss_pred ccccCCChhhhcccccchhhhcCCCccccCCCCc-cccCCCCCceecccCccccc-cCCccccCCCccceeeeecccccc
Q 043053 106 NALAGNIPAELGRLSNLEEMRAGGNKDIVGKIPA-ELGDCSNMTALGLADTQVSG-SLPASLGKLSKLQTLSIYTTMISG 183 (1058)
Q Consensus 106 n~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~l~~-~l~~l~~L~~L~l~~~~~~~-~~~~~l~~l~~L~~L~l~~n~i~~ 183 (1058)
|.+.+..|..++++++|++|++++|. +..++. .++.+++|++|++++|.+.+ .+|..|+++++|++|++++|.+.+
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~n~--l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~ 163 (570)
T 2z63_A 86 NPIQSLALGAFSGLSSLQKLVAVETN--LASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163 (570)
T ss_dssp CCCCEECTTTTTTCTTCCEEECTTSC--CCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCE
T ss_pred CcCCccCHhhhcCccccccccccccc--cccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccce
Confidence 77764444566666666666666665 333333 46667777777777776664 356666667777777776666665
Q ss_pred ccCccccCCCCc----cEEEccCCcCCCCCCCCcCCCCCcceeecccccccC-CCCccccCcCCccEEEeecCCCcCcCC
Q 043053 184 EIPAEIGNCSEL----VSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVG-AIPEEIGNCTSLKMIDFSLNSLSGTIP 258 (1058)
Q Consensus 184 ~~~~~l~~l~~L----~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~ 258 (1058)
..+..++.+++| +.|++++|.+++..+..|..+ +|+.|++++|.... ..+..+..+++++.+++....+..
T Consensus 164 ~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~--- 239 (570)
T 2z63_A 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRN--- 239 (570)
T ss_dssp ECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCC---
T ss_pred ecHHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccC---
Confidence 555666666666 666666666665555555544 56666666653321 122334455555554443322211
Q ss_pred ccccccCCcceeecccCccCCCccccccccc--cchhhhhcCC-cccCcCCCcccccchhhhhhccCcccCCCCChhhhc
Q 043053 259 LSIGGLSELEEFMISDNNVSGSIPANLANAT--NLVQLQLDTN-QISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLAS 335 (1058)
Q Consensus 259 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~--~L~~L~L~~N-~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 335 (1058)
..+++. .....+..+. .++.+++++| .+.+..+..|..+++|+.|++++|.++ .+|..+..
T Consensus 240 -----~~~l~~----------~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~ 303 (570)
T 2z63_A 240 -----EGNLEK----------FDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYN 303 (570)
T ss_dssp -----CSSCEE----------CCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSC
T ss_pred -----chhhhh----------cchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhcc
Confidence 000110 1111111111 2344444444 444445555555555555555555555 24444555
Q ss_pred cCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCc--cccccCccccce
Q 043053 336 CSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLI--PREIGGLKTLNF 413 (1058)
Q Consensus 336 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~ 413 (1058)
+ +|+.|++++|.+. .+|. ..+++|++|++++|.+.+..+. ..+++|++|++++|++++.. +..+..+++|++
T Consensus 304 ~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~ 377 (570)
T 2z63_A 304 F-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKY 377 (570)
T ss_dssp C-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCE
T ss_pred C-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCE
Confidence 5 6666666666655 3333 3455566666666655544333 45566666666666665443 445556666666
Q ss_pred eeccCccCCCCCCCcccCCcccchhhccCCccCCCCc-cccccCCCCCeeecCCCccccCCccccccccccccccccccc
Q 043053 414 LDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLP-NSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNL 492 (1058)
Q Consensus 414 L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 492 (1058)
|++++|.+.+..+. +..+++|+.|++++|.+++..+ ..|.++++|++|++++|.+++..|..|..+++|+.|+|++|+
T Consensus 378 L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 456 (570)
T 2z63_A 378 LDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 456 (570)
T ss_dssp EECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCE
T ss_pred EECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCc
Confidence 66666666543333 5566666666666666655433 345666666666666666665555666666666666666666
Q ss_pred CC-CCCCCcccCCcccccccccCCcccCCCChhhhhhHHHHHHHhhccCCCCCCCCccccccccccEEecCCCcccCCCC
Q 043053 493 FS-GPIPSSLGLCSSLQLLDLSSNQLTGSVPMELGQIEALEIALNLSCNGLTGPIPAQISALNKLSILDLSHNKLEGNLN 571 (1058)
Q Consensus 493 l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 571 (1058)
+. +.+|..+..+++|+.|++++|+++ +..|.+|..+++|+.|+|++|++++.++
T Consensus 457 l~~~~~p~~~~~l~~L~~L~l~~n~l~-------------------------~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 511 (570)
T 2z63_A 457 FQENFLPDIFTELRNLTFLDLSQCQLE-------------------------QLSPTAFNSLSSLQVLNMASNQLKSVPD 511 (570)
T ss_dssp EGGGEECSCCTTCTTCCEEECTTSCCC-------------------------EECTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CccccchhhhhcccCCCEEECCCCccc-------------------------cCChhhhhcccCCCEEeCCCCcCCCCCH
Confidence 65 345566666666666666666555 3445566788999999999999998764
Q ss_pred -cccccCcceeEEEecccccccCCCcccc-ccCC--CccccCCcccccCC
Q 043053 572 -PLAQLDNLVSLNISYNKFTGYLPDNKLF-RQLS--PTDLAGNEGLCSSR 617 (1058)
Q Consensus 572 -~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~~~~--~~~~~~n~~~c~~~ 617 (1058)
.+..+++|+.|++++|+|+|.+|....+ .|+. ...+.+.+ .|..+
T Consensus 512 ~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~~~~~~~~-~C~~~ 560 (570)
T 2z63_A 512 GIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSA-KCSGS 560 (570)
T ss_dssp TTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGGGEESCC-BBTTT
T ss_pred HHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhccccCCCch-hhCCC
Confidence 5788999999999999999999986544 3332 23344554 66554
No 20
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.8e-49 Score=428.50 Aligned_cols=250 Identities=27% Similarity=0.377 Sum_probs=196.9
Q ss_pred ccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc--
Q 043053 706 LVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN-- 782 (1058)
Q Consensus 706 ~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-- 782 (1058)
|.+.++||+|+||+||+| +..+++.||||++.... ......+.|.+|++++++++|||||++++++.+
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~---------~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~ 98 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK---------LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV 98 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG---------SCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhh---------CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc
Confidence 356778999999999999 56679999999985432 223346789999999999999999999999865
Q ss_pred --CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcC-CCCeeeec
Q 043053 783 --RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGL-EFEPYIAD 859 (1058)
Q Consensus 783 --~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~-~~~~kl~D 859 (1058)
+...|+|||||+||+|.+++++. ..+++..+..|+.||++||+|||+++. +||||||||+|||++. ++.+||+|
T Consensus 99 ~~~~~~~lvmEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH~~~~-~IiHRDlKp~NILl~~~~g~vKl~D 175 (290)
T 3fpq_A 99 KGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGD 175 (290)
T ss_dssp TTEEEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSS-CCCCCCCCGGGEEESSTTSCEEECC
T ss_pred CCCcEEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCC-CEEecccChhheeEECCCCCEEEEe
Confidence 34579999999999999999864 679999999999999999999999811 3999999999999984 78999999
Q ss_pred cccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcc
Q 043053 860 FGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQ 939 (1058)
Q Consensus 860 fGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1058)
||+|+.... ......+||+.|||||++.+ .|+.++|||||||++|||+||+.||..... ...+...+...
T Consensus 176 FGla~~~~~----~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~-~~~~~~~i~~~---- 245 (290)
T 3fpq_A 176 LGLATLKRA----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-AAQIYRRVTSG---- 245 (290)
T ss_dssp TTGGGGCCT----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-HHHHHHHHTTT----
T ss_pred CcCCEeCCC----CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-HHHHHHHHHcC----
Confidence 999985433 23346789999999998865 699999999999999999999999974322 11121111111
Q ss_pred ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 940 VLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
...+......+. ++.+++.+||++||++|||++|++++
T Consensus 246 ~~~~~~~~~~~~------~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 246 VKPASFDKVAIP------EVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp CCCGGGGGCCCH------HHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCCCCCccCCH------HHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111111111222 23457888999999999999999875
No 21
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-49 Score=484.30 Aligned_cols=506 Identities=19% Similarity=0.190 Sum_probs=429.8
Q ss_pred eeeEeecCCCCCCCCCccccCCCCCcEEEccCCcCCCCCCCCCCCCCcccEEecCCCCCCCCCChhhcCcccCCEEeccc
Q 043053 2 VTEITIQSVPLQLPIPTNLSSFKHLQTLVISDANLTGSIPFDIGDCVGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNS 81 (1058)
Q Consensus 2 ~~~~~~~~~~~~~~~p~~~~~~~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~ 81 (1058)
|+...+..||. .+| +++++|+|++|++++..+..+.++++|++|+|++|++++..|..++++++|++|+|++
T Consensus 14 c~~~~l~~ip~--~l~------~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 85 (570)
T 2z63_A 14 CMELNFYKIPD--NLP------FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTG 85 (570)
T ss_dssp CCSSCCSSCCS--SSC------SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred eCCCCccccCC--Ccc------ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcC
Confidence 44445666665 444 4799999999999866677899999999999999999966678899999999999999
Q ss_pred cCCCCccccccccchhhhHHhhhhccccCCChhhhcccccchhhhcCCCccccCCCCccccCCCCCceecccCccccccC
Q 043053 82 NQLTGKIPVELSNCKSLRKLLLFDNALAGNIPAELGRLSNLEEMRAGGNKDIVGKIPAELGDCSNMTALGLADTQVSGSL 161 (1058)
Q Consensus 82 n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~~~ 161 (1058)
|++++..|..|+++++|++|++++|.+.+..+..++++++|++|++++|......+|..++++++|++|++++|++.+..
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~ 165 (570)
T 2z63_A 86 NPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 165 (570)
T ss_dssp CCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEEC
T ss_pred CcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceec
Confidence 99997777899999999999999999984333479999999999999997222257999999999999999999999888
Q ss_pred CccccCCCcc----ceeeeeccccccccCccccCCCCccEEEccCCcCCC-CCCCCcCCCCCcceeeccccccc------
Q 043053 162 PASLGKLSKL----QTLSIYTTMISGEIPAEIGNCSELVSLFLYENSLSG-SIPPEIGKLKKLEELFLWQNSLV------ 230 (1058)
Q Consensus 162 ~~~l~~l~~L----~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~------ 230 (1058)
+..++.+++| +.|++++|.+.+..+..+..+ +|+.|++++|.... .++..+..+++++.+.+....+.
T Consensus 166 ~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~ 244 (570)
T 2z63_A 166 CTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLE 244 (570)
T ss_dssp GGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCE
T ss_pred HHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhh
Confidence 8899999888 899999999998888777766 89999999986542 24455667777777666543322
Q ss_pred CCCCccccCcC--CccEEEeecC-CCcCcCCccccccCCcceeecccCccCCCccccccccccchhhhhcCCcccCcCCC
Q 043053 231 GAIPEEIGNCT--SLKMIDFSLN-SLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPP 307 (1058)
Q Consensus 231 ~~~~~~l~~l~--~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~ 307 (1058)
......+..+. .++.+++++| .+.+..+..+..+++|++|++++|.+. .+|..+..+ +|++|++++|.+..+..
T Consensus 245 ~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~l~~- 321 (570)
T 2z63_A 245 KFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQFPT- 321 (570)
T ss_dssp ECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCSSCCB-
T ss_pred hcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCcccccCc-
Confidence 11222333333 3677888888 777788888999999999999999988 577778888 99999999999985433
Q ss_pred cccccchhhhhhccCcccCCCCChhhhccCcccccccccccccccC--cccccccccchhhhccccCCCCCCCCCccCCC
Q 043053 308 EIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASV--PAGLFQLQNLTKLLLISNDISGSIPPEIGNCS 385 (1058)
Q Consensus 308 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 385 (1058)
..+++|+.|++.+|.+.+..+. ..+++|+.|++++|++++.. +..+..+++|++|++++|.+.+..+. +..++
T Consensus 322 --~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~ 396 (570)
T 2z63_A 322 --LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLE 396 (570)
T ss_dssp --CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCT
T ss_pred --ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccC
Confidence 4778899999999998876655 78899999999999998654 67788999999999999999865554 99999
Q ss_pred CCcEEEccCccccCCcc-ccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccC-CCCccccccCCCCCeee
Q 043053 386 SLVRLRVGNNRIAGLIP-REIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQ-GSLPNSLSSLSGLQVLD 463 (1058)
Q Consensus 386 ~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~ 463 (1058)
+|++|++++|.+.+..+ ..|..+++|++|++++|.+.+..|..|..+++|+.|++++|.++ +.+|..|..+++|++|+
T Consensus 397 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~ 476 (570)
T 2z63_A 397 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 476 (570)
T ss_dssp TCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEE
Confidence 99999999999998766 57899999999999999999999999999999999999999997 57889999999999999
Q ss_pred cCCCccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCcccCCCChh
Q 043053 464 VSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVPME 524 (1058)
Q Consensus 464 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~ 524 (1058)
+++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|++++|++++..|..
T Consensus 477 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 477 LSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 9999999888999999999999999999999988889999999999999999999887753
No 22
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.4e-49 Score=440.04 Aligned_cols=262 Identities=24% Similarity=0.347 Sum_probs=211.9
Q ss_pred hhccccceeccccceEEEEEEec------CCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCC-Ccccce
Q 043053 704 KCLVDANVIGKGCSGVVYRADMD------NGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRH-KNIVRF 776 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~ 776 (1058)
++|++.+.||+|+||+||+|.+. .++.||||++... ......+.|.+|++++.+++| ||||++
T Consensus 64 ~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~----------~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG----------ATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTT----------CCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred HHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccc----------cChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 68999999999999999999543 2367999998533 223346789999999999975 999999
Q ss_pred eeEEEcC-CCceEEEEecCCCChhhhhhhcC--------------CCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCC
Q 043053 777 LGCCWNR-NNRLLMYDYMPNGSLGSLLHERT--------------GNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRD 841 (1058)
Q Consensus 777 ~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrD 841 (1058)
+|+|.++ +..++|||||++|+|.++++... ...+++..+..++.|||+||+|||++ +|||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCc
Confidence 9999765 56899999999999999997532 24589999999999999999999999 999999
Q ss_pred CCCCcEEEcCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCC
Q 043053 842 IKANNILIGLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDP 920 (1058)
Q Consensus 842 ikp~Nill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~ 920 (1058)
|||+|||+++++.+||+|||+|+..............+||+.|||||++.+..|+.++|||||||++|||+| |+.||..
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999997765444344556789999999999999999999999999999999998 9999976
Q ss_pred CCCCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 921 TIPDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
... ...+...+..... +..+...+ .+ +.+++..||+.||++|||++||+++|+.+.+.
T Consensus 291 ~~~-~~~~~~~i~~g~~-----~~~p~~~~---~~---~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 291 VKI-DEEFCRRLKEGTR-----MRAPDYTT---PE---MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp CCC-SHHHHHHHHHTCC-----CCCCTTCC---HH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCH-HHHHHHHHHcCCC-----CCCCccCC---HH---HHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 532 2233333333221 11222222 22 34578889999999999999999999887543
No 23
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.3e-49 Score=421.20 Aligned_cols=252 Identities=22% Similarity=0.325 Sum_probs=191.0
Q ss_pred HHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEE
Q 043053 702 VLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCC 780 (1058)
Q Consensus 702 ~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 780 (1058)
.+.+|++.+.||+|+||+||+| +..+|+.||||++.+... ......+.+.+|++++++++|||||++++++
T Consensus 11 ~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~--------~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~ 82 (275)
T 3hyh_A 11 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVL--------AKSDMQGRIEREISYLRLLRHPHIIKLYDVI 82 (275)
T ss_dssp ---CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC--------------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred EeeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHc--------CCHHHHHHHHHHHHHHHHCCCCCCCeEEEEE
Confidence 3578999999999999999999 556899999999864422 2233467899999999999999999999999
Q ss_pred EcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecc
Q 043053 781 WNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADF 860 (1058)
Q Consensus 781 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~Df 860 (1058)
.+++..|+||||+ +|+|.+++.. .+.+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 83 ~~~~~~~ivmEy~-~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DF 156 (275)
T 3hyh_A 83 KSKDEIIMVIEYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADF 156 (275)
T ss_dssp ECSSEEEEEEECC-CEEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCS
T ss_pred EECCEEEEEEeCC-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeec
Confidence 9999999999999 6799999986 36799999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccCCCcccccccccCcCCccCccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcc
Q 043053 861 GLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKI-TEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQ 939 (1058)
Q Consensus 861 Gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1058)
|+|+...... .....+||+.|||||++.+..+ +.++||||+||++|||++|+.||... ........+...
T Consensus 157 Gla~~~~~~~---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~--~~~~~~~~i~~~---- 227 (275)
T 3hyh_A 157 GLSNIMTDGN---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE--SIPVLFKNISNG---- 227 (275)
T ss_dssp SCC------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHT----
T ss_pred CCCeecCCCC---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHcC----
Confidence 9998765432 3345789999999999998876 57999999999999999999999753 112222222211
Q ss_pred ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 940 VLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
...+....+.+ +.+++.+||++||++|||++|++++-
T Consensus 228 --~~~~p~~~s~~------~~~li~~~L~~dP~~R~s~~eil~hp 264 (275)
T 3hyh_A 228 --VYTLPKFLSPG------AAGLIKRMLIVNPLNRISIHEIMQDD 264 (275)
T ss_dssp --CCCCCTTSCHH------HHHHHHHHSCSSGGGSCCHHHHHHCH
T ss_pred --CCCCCCCCCHH------HHHHHHHHccCChhHCcCHHHHHcCc
Confidence 11122222222 34577889999999999999998854
No 24
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=9.9e-49 Score=442.90 Aligned_cols=250 Identities=22% Similarity=0.337 Sum_probs=206.2
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
+.|+..+.||+|+||+||+| +..+|+.||||++... .....+.+.+|+.+|++++|||||+++++|.+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~-----------~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~ 219 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR-----------KQQRRELLFNEVVIMRDYQHENVVEMYNSYLV 219 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEST-----------TCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEecc-----------chhHHHHHHHHHHHHHhCCCCCCCceEEEEEE
Confidence 46899999999999999999 5568999999998532 12235678999999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
++..|+|||||+||+|.++++. ..+++..+..|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+
T Consensus 220 ~~~~~iVmEy~~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGl 293 (423)
T 4fie_A 220 GDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGF 293 (423)
T ss_dssp TTEEEEEEECCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTT
T ss_pred CCEEEEEEeCCCCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCcc
Confidence 9999999999999999999975 4589999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccccC
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVLD 942 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1058)
|+.+.... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||.... .......+..... ..
T Consensus 294 a~~~~~~~--~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~~~~~---~~ 366 (423)
T 4fie_A 294 CAQVSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRDNLP---PR 366 (423)
T ss_dssp CEECCSSC--CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSCC---CC
T ss_pred ceECCCCC--ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHHcCCC---CC
Confidence 99775433 23456789999999999999999999999999999999999999997542 2222222222111 11
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 943 PSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
.......+. .+.+++.+||..||++|||++|++++
T Consensus 367 ~~~~~~~s~------~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 367 LKNLHKVSP------SLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp CSCTTSSCH------HHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CcccccCCH------HHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111112222 23457788999999999999999875
No 25
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=9.9e-49 Score=478.79 Aligned_cols=452 Identities=18% Similarity=0.259 Sum_probs=375.7
Q ss_pred CcccEEecCCCCCCCCCChhhcCcccCCEEeccccCC------CC------ccccccccchhhhHHhhhhccccCCChhh
Q 043053 48 VGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNSNQL------TG------KIPVELSNCKSLRKLLLFDNALAGNIPAE 115 (1058)
Q Consensus 48 ~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n~~------~~------~~p~~l~~l~~L~~L~L~~n~~~~~~p~~ 115 (1058)
.+++.|+|++|+++|.+|.++++|++|++|+|++|.+ .+ .+|... +.+|+ +++++|.+.+..|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 4789999999999999999999999999999999976 22 345444 78888 999999999888888
Q ss_pred hcc-cccchhhhcCCCccccCCCCccccCCCCCceeccc--CccccccCCccccCCCccceeeeeccccccc--------
Q 043053 116 LGR-LSNLEEMRAGGNKDIVGKIPAELGDCSNMTALGLA--DTQVSGSLPASLGKLSKLQTLSIYTTMISGE-------- 184 (1058)
Q Consensus 116 l~~-l~~L~~L~l~~~~~~~~~l~~~l~~l~~L~~L~l~--~~~~~~~~~~~l~~l~~L~~L~l~~n~i~~~-------- 184 (1058)
++. +..+..+++.... ........++.+.+. +|++++ +|..|+++++|++|++++|.+++.
T Consensus 158 ~~~~~~~l~~~~l~~~~-------~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~ 229 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKS-------IKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWEN 229 (636)
T ss_dssp SCHHHHHHHHHCTTSCC-------CCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSC
T ss_pred HHHHHHHHhhcCccccc-------cccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccc
Confidence 775 5566666555432 111223344444444 578887 899999999999999999999875
Q ss_pred ---------cCcccc--CCCCccEEEccCCcCCCCCCCCcCCCCCcceeeccccc-ccC-CCCccccCc------CCccE
Q 043053 185 ---------IPAEIG--NCSELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNS-LVG-AIPEEIGNC------TSLKM 245 (1058)
Q Consensus 185 ---------~~~~l~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~-~~~~~l~~l------~~L~~ 245 (1058)
+|..++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..++.+ ++|++
T Consensus 230 ~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~ 309 (636)
T 4eco_A 230 ENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQI 309 (636)
T ss_dssp TTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCE
T ss_pred cccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCE
Confidence 899998 99999999999999998999999999999999999998 887 788888776 89999
Q ss_pred EEeecCCCcCcCCc--cccccCCcceeecccCccCCCccccccccccchhhhhcCCcccCcCCCcccccch-hhhhhccC
Q 043053 246 IDFSLNSLSGTIPL--SIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSK-LTVFFAWQ 322 (1058)
Q Consensus 246 L~L~~n~l~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~-L~~L~l~~ 322 (1058)
|++++|+++ .+|. .++.+++|++|++++|.+.+.+| .|..+++|++|+|++|+++ ..|..|..+++ |++|++++
T Consensus 310 L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~ 386 (636)
T 4eco_A 310 IYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAH 386 (636)
T ss_dssp EECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCS
T ss_pred EECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccC
Confidence 999999998 7787 89999999999999999997778 8899999999999999998 66778899988 99999999
Q ss_pred cccCCCCChhhhccC--cccccccccccccccCccccc-------ccccchhhhccccCCCCCCCCCccCCCCCcEEEcc
Q 043053 323 NQLEGSIPSTLASCS--NLQALDLSHNSLTASVPAGLF-------QLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVG 393 (1058)
Q Consensus 323 N~l~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 393 (1058)
|+++ .+|..+..++ +|+.|++++|++.+..|..+. .+++|++|+|++|++++..+..+..+++|+.|+|+
T Consensus 387 N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls 465 (636)
T 4eco_A 387 NKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLM 465 (636)
T ss_dssp SCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECC
T ss_pred CcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECC
Confidence 9998 6677776654 899999999999988888877 77889999999999985544456678899999999
Q ss_pred CccccCCccccccCcc-------ccceeeccCccCCCCCCCccc--CCcccchhhccCCccCCCCccccccCCCCCeeec
Q 043053 394 NNRIAGLIPREIGGLK-------TLNFLDLSSNRLSGSVPDEIG--DCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDV 464 (1058)
Q Consensus 394 ~N~l~~~~~~~~~~l~-------~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 464 (1058)
+|+|+.+.+..+..+. +|++|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+|
T Consensus 466 ~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~L 543 (636)
T 4eco_A 466 GNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGI 543 (636)
T ss_dssp SSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEEC
T ss_pred CCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEEC
Confidence 9999866555555443 8999999999998 6777776 88999999999999987 7888889999999999
Q ss_pred ------CCCccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCcccC
Q 043053 465 ------SDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTG 519 (1058)
Q Consensus 465 ------~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 519 (1058)
++|++.+.+|..+..+++|+.|+|++|+| +.+|..+. ++|+.|++++|++..
T Consensus 544 s~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 544 RNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp CSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCE
T ss_pred CCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCcc
Confidence 56778888888888899999999999999 46777665 789999999998873
No 26
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.6e-48 Score=429.52 Aligned_cols=269 Identities=29% Similarity=0.338 Sum_probs=202.0
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
++|...+.||+|+||+||+|.+. |+.||||++... ......+.+|+..+.+++|||||++++++.++
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~------------~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~ 69 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR------------EERSWFREAEIYQTVMLRHENILGFIAADNKD 69 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGG------------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECcc------------chhhHHHHHHHHHHhcCCCCCCCcEEEEEEec
Confidence 57888999999999999999874 899999998432 11123344567777889999999999999865
Q ss_pred C----CceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccC-----CCCeEeCCCCCCcEEEcCCCC
Q 043053 784 N----NRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDC-----VPPIVHRDIKANNILIGLEFE 854 (1058)
Q Consensus 784 ~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivHrDikp~Nill~~~~~ 854 (1058)
+ ..|+|||||++|+|.++++. ..++|..+.+++.|+|+||+|||+++ .++||||||||+|||++.++.
T Consensus 70 ~~~~~~~~lV~Ey~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~ 146 (303)
T 3hmm_A 70 NGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 146 (303)
T ss_dssp CSSSEEEEEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred CCCceEEEEEecCCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCC
Confidence 4 46899999999999999986 46899999999999999999999762 358999999999999999999
Q ss_pred eeeeccccceeccCCCcc--cccccccCcCCccCccccccC------CCCcccchhhHHHHHHHHHhCCCCCCCCC----
Q 043053 855 PYIADFGLAKLVDDGDFA--RSSNTVAGSYGYIAPEYGYMM------KITEKSDVYSYGVVVLEVLTGKQPIDPTI---- 922 (1058)
Q Consensus 855 ~kl~DfGl~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvvl~elltg~~P~~~~~---- 922 (1058)
+||+|||+|+........ ......+||+.|||||++.+. .++.++|||||||++|||+||+.||....
T Consensus 147 ~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~ 226 (303)
T 3hmm_A 147 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 226 (303)
T ss_dssp EEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCC
T ss_pred EEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccc
Confidence 999999999877654321 123356799999999998654 46779999999999999999987764321
Q ss_pred ------CCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 923 ------PDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 923 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
+....... +.........+|.+...... .+....+.+++.+||+.||++||||+||++.|+++.++
T Consensus 227 p~~~~~~~~~~~~~-~~~~~~~~~~rp~~p~~~~~-~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 227 PYYDLVPSDPSVEE-MRKVVCEQKLRPNIPNRWQS-CEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp TTTTTSCSSCCHHH-HHHHHTTSCCCCCCCGGGGS-SHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cchhcccccchHHH-HHHHHhcccCCCCCCccccc-hHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 11111112 22222222333333322211 12223345689999999999999999999999988654
No 27
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.3e-48 Score=425.17 Aligned_cols=250 Identities=24% Similarity=0.288 Sum_probs=196.2
Q ss_pred hhccccceeccccceEEEEEEe----cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 704 KCLVDANVIGKGCSGVVYRADM----DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
++|++.+.||+|+||+||+|.. .+++.||||++.+.... .....++.+|++++++++|||||+++++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~---------~~~~~~~~~E~~il~~l~HpnIv~l~~~ 94 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK---------VRDRVRTKMERDILVEVNHPFIVKLHYA 94 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEE---------EEECC------CCCCCCCCTTEECEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcC---------hHHHHHHHHHHHHHHHCCCCCCCeEEEE
Confidence 5799999999999999999954 35789999999654321 1223468899999999999999999999
Q ss_pred EEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeec
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIAD 859 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~D 859 (1058)
+.+++..|+|||||+||+|.++++.. +.+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|
T Consensus 95 ~~~~~~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~D 169 (304)
T 3ubd_A 95 FQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTD 169 (304)
T ss_dssp EEETTEEEEEECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEES
T ss_pred EEECCEEEEEEEcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecc
Confidence 99999999999999999999999864 5799999999999999999999999 999999999999999999999999
Q ss_pred cccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcc
Q 043053 860 FGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQ 939 (1058)
Q Consensus 860 fGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1058)
||+|+...... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||.... .......+...
T Consensus 170 FGla~~~~~~~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--~~~~~~~i~~~---- 241 (304)
T 3ubd_A 170 FGLSKESIDHE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD--RKETMTMILKA---- 241 (304)
T ss_dssp SEEEEC-------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHC----
T ss_pred cccceeccCCC--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC--HHHHHHHHHcC----
Confidence 99998654432 33456789999999999999999999999999999999999999997542 22222222221
Q ss_pred ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 043053 940 VLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTM-----KDVAAM 983 (1058)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~-----~~v~~~ 983 (1058)
....+...+. ++.+++.+||++||++|||+ +|++++
T Consensus 242 --~~~~p~~~s~------~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 242 --KLGMPQFLSP------EAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp --CCCCCTTSCH------HHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred --CCCCCCcCCH------HHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 1112222222 23457888999999999985 466543
No 28
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6.6e-49 Score=480.35 Aligned_cols=454 Identities=17% Similarity=0.244 Sum_probs=354.7
Q ss_pred CCCcEEEccCCcCCCCCCCCCCCCCcccEEecCCCCC------CC------CCChhhcCcccCCEEeccccCCCCccccc
Q 043053 24 KHLQTLVISDANLTGSIPFDIGDCVGLIVLDFSSNNL------VG------TLPSSLGKLHNLEELILNSNQLTGKIPVE 91 (1058)
Q Consensus 24 ~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~i------~~------~lp~~l~~l~~L~~L~L~~n~~~~~~p~~ 91 (1058)
.+++.|+|+++.+.|.+|.++++|++|++|+|++|.+ .+ .+|..+ +..|+ ++++.|.+.+..|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 5799999999999999999999999999999999976 23 567666 67888 999999998888888
Q ss_pred cc-cchhhhHHhhhhccccCCChhhhcccccchhhhcCC-CccccCCCCccccCCCCCceecccCcccccc---------
Q 043053 92 LS-NCKSLRKLLLFDNALAGNIPAELGRLSNLEEMRAGG-NKDIVGKIPAELGDCSNMTALGLADTQVSGS--------- 160 (1058)
Q Consensus 92 l~-~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~l~~-~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~~--------- 160 (1058)
+. .+..+..+++....+. ......++.+.+.. ++.+.+ +|..++++++|++|++++|++++.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~------~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~ 230 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIK------KSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENE 230 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCC------CCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCT
T ss_pred HHHHHHHHhhcCccccccc------cccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccccc
Confidence 77 4556666666543322 12233455555554 223334 788888888888888888888764
Q ss_pred --------CCcccc--CCCccceeeeeccccccccCccccCCCCccEEEccCCc-CCC-CCCCCcCCC------CCccee
Q 043053 161 --------LPASLG--KLSKLQTLSIYTTMISGEIPAEIGNCSELVSLFLYENS-LSG-SIPPEIGKL------KKLEEL 222 (1058)
Q Consensus 161 --------~~~~l~--~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~-l~~-~~~~~~~~l------~~L~~L 222 (1058)
+|..++ ++++|++|++++|.+.+.+|..++++++|++|+|++|. +++ .+|..++.+ ++|++|
T Consensus 231 ~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L 310 (636)
T 4eco_A 231 NSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQII 310 (636)
T ss_dssp TSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEE
T ss_pred ccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEE
Confidence 788877 88888888888888888888888888888888888887 776 677777665 788888
Q ss_pred ecccccccCCCCc--cccCcCCccEEEeecCCCcCcCCccccccCCcceeecccCccCCCcccccccccc-chhhhhcCC
Q 043053 223 FLWQNSLVGAIPE--EIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATN-LVQLQLDTN 299 (1058)
Q Consensus 223 ~L~~n~l~~~~~~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~L~~N 299 (1058)
+|++|.++ .+|. .|+++++|++|++++|+++|.+| .++.+++|++|++++|.+. .+|..+..+++ |++|++++|
T Consensus 311 ~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N 387 (636)
T 4eco_A 311 YIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHN 387 (636)
T ss_dssp ECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSS
T ss_pred ECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCC
Confidence 88888887 6676 78888888888888888887777 7788888888888888887 66777888887 888888888
Q ss_pred cccCcCCCcccccc--hhhhhhccCcccCCCCChhhh-------ccCcccccccccccccccCcccc-cccccchhhhcc
Q 043053 300 QISGLIPPEIGMLS--KLTVFFAWQNQLEGSIPSTLA-------SCSNLQALDLSHNSLTASVPAGL-FQLQNLTKLLLI 369 (1058)
Q Consensus 300 ~i~~~~~~~~~~l~--~L~~L~l~~N~l~~~~~~~~~-------~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~ 369 (1058)
+++ ..|..+..++ +|++|++++|++++..|..|. .+++|+.|+|++|+++. +|..+ ..+++|++|+|+
T Consensus 388 ~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~-lp~~~~~~l~~L~~L~Ls 465 (636)
T 4eco_A 388 KLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISK-FPKELFSTGSPLSSINLM 465 (636)
T ss_dssp CCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCS-CCTHHHHTTCCCSEEECC
T ss_pred cCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCc-CCHHHHccCCCCCEEECC
Confidence 887 5566666654 788888888888887777777 77788888888888884 55444 457888888888
Q ss_pred ccCCCCCCCCCccCC-------CCCcEEEccCccccCCcccccc--CccccceeeccCccCCCCCCCcccCCcccchhhc
Q 043053 370 SNDISGSIPPEIGNC-------SSLVRLRVGNNRIAGLIPREIG--GLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDL 440 (1058)
Q Consensus 370 ~N~l~~~~~~~~~~l-------~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 440 (1058)
+|+++.+.+..+... ++|+.|+|++|+|+. +|..+. .+++|++|+|++|++++ +|..+..+++|+.|+|
T Consensus 466 ~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~L 543 (636)
T 4eco_A 466 GNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTK-LSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGI 543 (636)
T ss_dssp SSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCCB-CCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEEC
T ss_pred CCCCCCcCHHHhccccccccccCCccEEECcCCcCCc-cChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEEC
Confidence 888884433344333 288999999999884 455665 88899999999999986 7888888899999988
Q ss_pred ------cCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCC
Q 043053 441 ------SHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPI 497 (1058)
Q Consensus 441 ------~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 497 (1058)
++|++.+.+|..+..+++|++|+|++|++ +.+|..+. ++|+.|+|++|++....
T Consensus 544 s~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 544 RNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNISID 603 (636)
T ss_dssp CSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCEEE
T ss_pred CCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCcccc
Confidence 56778888999999999999999999999 57787766 79999999999887543
No 29
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=3.7e-48 Score=468.58 Aligned_cols=482 Identities=20% Similarity=0.195 Sum_probs=359.5
Q ss_pred CcEEEccCCcCCCCCCCCCCCCCcccEEecCCCCCCCCCChhhcCcccCCEEeccccCCCCccccccccchhhhHHhhhh
Q 043053 26 LQTLVISDANLTGSIPFDIGDCVGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNSNQLTGKIPVELSNCKSLRKLLLFD 105 (1058)
Q Consensus 26 L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~L~~ 105 (1058)
..+.+.+++.++ .+|..+. .+|++|+|++|++++..|.+++++++|++|+|++|++.+..|..|+++++|++|+|++
T Consensus 7 ~~~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~ 83 (549)
T 2z81_A 7 SGVCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSD 83 (549)
T ss_dssp TSEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred CceEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCC
Confidence 334566677776 6776554 5777777777777755566777777777777777777765666777777777777777
Q ss_pred ccccCCChhhhcccccchhhhcCCCccccCCCCccccCCCCCceecccCccccccCC-ccccCCCccceeeeeccccccc
Q 043053 106 NALAGNIPAELGRLSNLEEMRAGGNKDIVGKIPAELGDCSNMTALGLADTQVSGSLP-ASLGKLSKLQTLSIYTTMISGE 184 (1058)
Q Consensus 106 n~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~~~~-~~l~~l~~L~~L~l~~n~i~~~ 184 (1058)
|.+.+..|..++++++|++|++++|.......|..++.+++|++|++++|.+.+.+| ..|+++++|++|++++|.+.+.
T Consensus 84 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 163 (549)
T 2z81_A 84 NHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNY 163 (549)
T ss_dssp SCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEE
T ss_pred CccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccccc
Confidence 777755556677777777777777762111345667778888888888777433443 5677888888888888888777
Q ss_pred cCccccCCCCccEEEccCCcCCCCCCCC-cCCCCCcceeecccccccCCC--C-ccccCcCCccEEEeecCCCcCcCCc-
Q 043053 185 IPAEIGNCSELVSLFLYENSLSGSIPPE-IGKLKKLEELFLWQNSLVGAI--P-EEIGNCTSLKMIDFSLNSLSGTIPL- 259 (1058)
Q Consensus 185 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~~--~-~~l~~l~~L~~L~L~~n~l~~~~~~- 259 (1058)
.|..++.+++|++|++++|.+. .+|.. +..+++|++|++++|.+.+.. + .....+++|+.|++++|.+++..+.
T Consensus 164 ~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 242 (549)
T 2z81_A 164 QSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNE 242 (549)
T ss_dssp CTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHH
T ss_pred ChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHH
Confidence 7778888888888888888776 33333 345778888888888777542 1 2234567788888888877654333
Q ss_pred ---cccccCCcceeecccCccCCCc------cccccccccchhhhhcCCcccCcC-----CCcccccchhhhhhccCccc
Q 043053 260 ---SIGGLSELEEFMISDNNVSGSI------PANLANATNLVQLQLDTNQISGLI-----PPEIGMLSKLTVFFAWQNQL 325 (1058)
Q Consensus 260 ---~~~~l~~L~~L~l~~n~l~~~~------~~~~~~l~~L~~L~L~~N~i~~~~-----~~~~~~l~~L~~L~l~~N~l 325 (1058)
.+..+++|+.+++++|.+.+.. ...+..+.+|+.|++.++.+.... +..+....+|+.|++++|++
T Consensus 243 l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l 322 (549)
T 2z81_A 243 LLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKV 322 (549)
T ss_dssp HHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCC
T ss_pred HHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCcc
Confidence 3355677888888888766431 123456677888888887765431 11234456788899999998
Q ss_pred CCCCChhh-hccCcccccccccccccccCc---ccccccccchhhhccccCCCCCCC--CCccCCCCCcEEEccCccccC
Q 043053 326 EGSIPSTL-ASCSNLQALDLSHNSLTASVP---AGLFQLQNLTKLLLISNDISGSIP--PEIGNCSSLVRLRVGNNRIAG 399 (1058)
Q Consensus 326 ~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~L~~N~l~~ 399 (1058)
+. +|..+ ..+++|++|++++|++.+..| ..+..+++|++|+|++|++++..+ ..+..+++|++|++++|+|+.
T Consensus 323 ~~-ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 401 (549)
T 2z81_A 323 FL-VPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHP 401 (549)
T ss_dssp CC-CCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCC
T ss_pred cc-CCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCcc
Confidence 84 45544 689999999999999987664 346788999999999999986432 458889999999999999995
Q ss_pred CccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccc
Q 043053 400 LIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGR 479 (1058)
Q Consensus 400 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 479 (1058)
.|..+..+++|++|+|++|++++ +|..+ .++|+.|++++|+|++.+ ..+++|++|+|++|+|+ .+|. ...
T Consensus 402 -lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~ 471 (549)
T 2z81_A 402 -MPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASL 471 (549)
T ss_dssp -CCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGG
T ss_pred -CChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-ccc
Confidence 57788899999999999999984 44433 268999999999999743 57899999999999998 6665 567
Q ss_pred cccccccccccccCCCCCCCcccCCcccccccccCCcccCCCC
Q 043053 480 LVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVP 522 (1058)
Q Consensus 480 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 522 (1058)
+++|+.|+|++|++++.+|..|..+++|+.|++++|++.+..|
T Consensus 472 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 472 FPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred CccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 8999999999999999889999999999999999999987766
No 30
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2e-47 Score=418.36 Aligned_cols=254 Identities=22% Similarity=0.354 Sum_probs=189.6
Q ss_pred HHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEE
Q 043053 702 VLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCC 780 (1058)
Q Consensus 702 ~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 780 (1058)
..++|++.+.||+|+||+||+| +..+|+.||||++... ..+...+.+.+|++++++++|||||++++++
T Consensus 3 ~l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~----------~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~ 72 (299)
T 4g31_A 3 YLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLP----------NRELAREKVMREVKALAKLEHPGIVRYFNAW 72 (299)
T ss_dssp HHHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEEC----------SSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred cchhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEecc----------CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 3567999999999999999999 5568999999998532 2334567899999999999999999999998
Q ss_pred EcCCC------------ceEEEEecCCCChhhhhhhcCC-CCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcE
Q 043053 781 WNRNN------------RLLMYDYMPNGSLGSLLHERTG-NALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNI 847 (1058)
Q Consensus 781 ~~~~~------------~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Ni 847 (1058)
.+.+. .|+|||||+||+|.++++.+.. ...++..++.|+.||++||+|||++ +||||||||+||
T Consensus 73 ~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NI 149 (299)
T 4g31_A 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNI 149 (299)
T ss_dssp EEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred EecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHe
Confidence 75443 5899999999999999986432 2356677889999999999999999 999999999999
Q ss_pred EEcCCCCeeeeccccceeccCCCcc----------cccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCC
Q 043053 848 LIGLEFEPYIADFGLAKLVDDGDFA----------RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQP 917 (1058)
Q Consensus 848 ll~~~~~~kl~DfGl~~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P 917 (1058)
|++.++.+||+|||+|+........ ...+..+||+.|||||++.+..|+.++||||+||++|||++ |
T Consensus 150 Ll~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---P 226 (299)
T 4g31_A 150 FFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---P 226 (299)
T ss_dssp EECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---C
T ss_pred EECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---C
Confidence 9999999999999999876543211 12345679999999999999999999999999999999996 7
Q ss_pred CCCCCCCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 918 IDPTIPDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
|... ......+...... ..++..........+++.+||++||++|||+.|++++
T Consensus 227 f~~~----~~~~~~~~~~~~~--------~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 227 FSTQ----MERVRTLTDVRNL--------KFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp CSSH----HHHHHHHHHHHTT--------CCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCc----cHHHHHHHHHhcC--------CCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 7532 1111111111110 0111111222234458899999999999999999874
No 31
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=9.6e-48 Score=464.92 Aligned_cols=491 Identities=18% Similarity=0.207 Sum_probs=359.4
Q ss_pred CCcccEEecCCCCCCCCCChhhcCcccCCEEeccccCCCCccccccccchhhhHHhhhhccccCCChhhhcccccchhhh
Q 043053 47 CVGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNSNQLTGKIPVELSNCKSLRKLLLFDNALAGNIPAELGRLSNLEEMR 126 (1058)
Q Consensus 47 l~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~ 126 (1058)
|....+.|.++++++ .+|..+. ++|++|+|++|++++..|..|.++++|++|++++|.+.+..|..++++++|++|+
T Consensus 4 C~~~~~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 80 (549)
T 2z81_A 4 CDASGVCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLD 80 (549)
T ss_dssp ECTTSEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCceEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEE
Confidence 344455789999998 9998775 7999999999999977788999999999999999999976778899999999999
Q ss_pred cCCCccccCCCCc-cccCCCCCceecccCccccc-cCCccccCCCccceeeeeccccccccC-ccccCCCCccEEEccCC
Q 043053 127 AGGNKDIVGKIPA-ELGDCSNMTALGLADTQVSG-SLPASLGKLSKLQTLSIYTTMISGEIP-AEIGNCSELVSLFLYEN 203 (1058)
Q Consensus 127 l~~~~~~~~~l~~-~l~~l~~L~~L~l~~~~~~~-~~~~~l~~l~~L~~L~l~~n~i~~~~~-~~l~~l~~L~~L~L~~n 203 (1058)
+++|. ...++. .++.+++|++|++++|++.+ ..|..++++++|++|++++|.+.+.+| ..+.++++|++|++++|
T Consensus 81 Ls~n~--l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n 158 (549)
T 2z81_A 81 LSDNH--LSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKAL 158 (549)
T ss_dssp CTTSC--CCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred CCCCc--cCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCC
Confidence 99997 445554 48899999999999999885 356788999999999999998544554 68899999999999999
Q ss_pred cCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCcC--C-ccccccCCcceeecccCccCCC
Q 043053 204 SLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTI--P-LSIGGLSELEEFMISDNNVSGS 280 (1058)
Q Consensus 204 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~--~-~~~~~l~~L~~L~l~~n~l~~~ 280 (1058)
.+++..|..++.+++|+.|++++|.+.......+..+++|++|++++|++++.. + .....+++|+.|++++|.+.+.
T Consensus 159 ~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 238 (549)
T 2z81_A 159 SLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDE 238 (549)
T ss_dssp TCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHH
T ss_pred cccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchh
Confidence 999888899999999999999999886332233457899999999999988642 2 2234578889999998887754
Q ss_pred ccc----cccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCccccccccccccccc----
Q 043053 281 IPA----NLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTAS---- 352 (1058)
Q Consensus 281 ~~~----~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---- 352 (1058)
.+. .+..+++|+.|++++|.+.+...-. ......+..+.+|+.|+++++.+...
T Consensus 239 ~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~------------------~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~ 300 (549)
T 2z81_A 239 SFNELLKLLRYILELSEVEFDDCTLNGLGDFN------------------PSESDVVSELGKVETVTIRRLHIPQFYLFY 300 (549)
T ss_dssp HHHHHHGGGGGCTTCCEEEEESCEEECCSCCC------------------CCTTTCCCCCTTCCEEEEESCBCSCGGGSC
T ss_pred HHHHHHHHhhhhcccccccccccccccccccc------------------ccchhhhhhhcccccccccccccchhhhcc
Confidence 433 3355677888888888776542110 00112234455666666666655421
Q ss_pred -CcccccccccchhhhccccCCCCCCCCCc-cCCCCCcEEEccCccccCCcc---ccccCccccceeeccCccCCCCCC-
Q 043053 353 -VPAGLFQLQNLTKLLLISNDISGSIPPEI-GNCSSLVRLRVGNNRIAGLIP---REIGGLKTLNFLDLSSNRLSGSVP- 426 (1058)
Q Consensus 353 -~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~N~l~~~~~- 426 (1058)
.+..+...++|++|++++|.+. .+|..+ .++++|++|+|++|++++..| ..++.+++|++|+|++|++++..+
T Consensus 301 ~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 379 (549)
T 2z81_A 301 DLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKT 379 (549)
T ss_dssp CCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHH
T ss_pred cchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccc
Confidence 1111223456677777777766 344443 457777777777777766543 236667777777777777765432
Q ss_pred -CcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCc
Q 043053 427 -DEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCS 505 (1058)
Q Consensus 427 -~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 505 (1058)
..+..+++|+.|++++|++++ +|..+..+++|++|++++|+++ .+|..+. ++|+.|+|++|+|++.+ ..++
T Consensus 380 ~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~ 451 (549)
T 2z81_A 380 GEILLTLKNLTSLDISRNTFHP-MPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS----LFLP 451 (549)
T ss_dssp HHHGGGCTTCCEEECTTCCCCC-CCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC----CCCT
T ss_pred hhhhhcCCCCCEEECCCCCCcc-CChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc----ccCC
Confidence 346677777777777777773 5666777777777777777776 3343332 46777777777777542 4567
Q ss_pred ccccccccCCcccCCCChhhhhhHHHHHHHhhccCCCCCCCCccccccccccEEecCCCcccCCCC-cccccCcceeEEE
Q 043053 506 SLQLLDLSSNQLTGSVPMELGQIEALEIALNLSCNGLTGPIPAQISALNKLSILDLSHNKLEGNLN-PLAQLDNLVSLNI 584 (1058)
Q Consensus 506 ~L~~L~l~~N~l~~~~p~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~l 584 (1058)
+|++|+|++|+|+ .+|. ...+++|+.|||++|++++.++ .+..+++|+.|++
T Consensus 452 ~L~~L~Ls~N~l~-~ip~--------------------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 504 (549)
T 2z81_A 452 RLQELYISRNKLK-TLPD--------------------------ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWL 504 (549)
T ss_dssp TCCEEECCSSCCS-SCCC--------------------------GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEEC
T ss_pred hhcEEECCCCccC-cCCC--------------------------cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEe
Confidence 7888888888776 3442 2346789999999999998765 4888999999999
Q ss_pred ecccccccCCCc
Q 043053 585 SYNKFTGYLPDN 596 (1058)
Q Consensus 585 ~~N~l~~~~~~~ 596 (1058)
++|+|+|.+|..
T Consensus 505 ~~N~~~~~~~~~ 516 (549)
T 2z81_A 505 HTNPWDCSCPRI 516 (549)
T ss_dssp CSSCBCCCHHHH
T ss_pred cCCCccCCCccH
Confidence 999999988853
No 32
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=8.8e-47 Score=467.76 Aligned_cols=435 Identities=19% Similarity=0.242 Sum_probs=241.9
Q ss_pred CcccEEecCCCCCCCCCChhhcCcccCCEEec-cccCCCCccccccc---------cchhhhHHhhhhccccCCChhhhc
Q 043053 48 VGLIVLDFSSNNLVGTLPSSLGKLHNLEELIL-NSNQLTGKIPVELS---------NCKSLRKLLLFDNALAGNIPAELG 117 (1058)
Q Consensus 48 ~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L-~~n~~~~~~p~~l~---------~l~~L~~L~L~~n~~~~~~p~~l~ 117 (1058)
.+++.|+|++|++.|.+|.+|++|++|++|+| ++|.+.+..|-... .+..++..... .+....|. .
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~--~~l~~~~~--~ 398 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKK--MFLDYDQR--L 398 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHH--HHTCCCGG--G
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhh--hhhccCcc--h
Confidence 46899999999999999999999999999999 88877655332211 11222222221 11111111 0
Q ss_pred ccccchhhhcCCCccccCCCCccccCCCCCceecccC--ccccccCCccccCCCccceeeeeccccccc-----------
Q 043053 118 RLSNLEEMRAGGNKDIVGKIPAELGDCSNMTALGLAD--TQVSGSLPASLGKLSKLQTLSIYTTMISGE----------- 184 (1058)
Q Consensus 118 ~l~~L~~L~l~~~~~~~~~l~~~l~~l~~L~~L~l~~--~~~~~~~~~~l~~l~~L~~L~l~~n~i~~~----------- 184 (1058)
++..+-...+..+. ...+........++.+.+.. |++++ +|..|+++++|+.|+|++|.+++.
T Consensus 399 ~~s~l~~~~l~~~~---~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~ 474 (876)
T 4ecn_A 399 NLSDLLQDAINRNP---EMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANS 474 (876)
T ss_dssp GSCHHHHHHHHTCT---TSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTS
T ss_pred hhhHHHHHHhhhCc---cccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCccccccccccc
Confidence 11111111111111 01111112233444444443 66665 677777777777777777777652
Q ss_pred ------cCcccc--CCCCccEEEccCCcCCCCCCCCcCCCCCcceeeccccc-ccC-CCCccccCcC-------CccEEE
Q 043053 185 ------IPAEIG--NCSELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNS-LVG-AIPEEIGNCT-------SLKMID 247 (1058)
Q Consensus 185 ------~~~~l~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~-~~~~~l~~l~-------~L~~L~ 247 (1058)
+|..++ ++++|+.|+|++|.+.+.+|..|+++++|+.|+|++|+ +++ .+|..++.++ +|++|+
T Consensus 475 n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~ 554 (876)
T 4ecn_A 475 DYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFY 554 (876)
T ss_dssp HHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEE
T ss_pred ccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEE
Confidence 555554 55555555555555555555555555555555555554 444 3444443333 555555
Q ss_pred eecCCCcCcCCc--cccccCCcceeecccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCccc
Q 043053 248 FSLNSLSGTIPL--SIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQL 325 (1058)
Q Consensus 248 L~~n~l~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l 325 (1058)
|++|+++ .+|. .++++++|+.|++++|.+. .+| .|..+++|+.|+|++|+ +
T Consensus 555 Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~------------------------l 607 (876)
T 4ecn_A 555 MGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQ------------------------I 607 (876)
T ss_dssp CCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSC------------------------C
T ss_pred eeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCc------------------------c
Confidence 5555555 4444 4555555555555555544 333 44444445555554444 4
Q ss_pred CCCCChhhhccCc-ccccccccccccccCcccccccc--cchhhhccccCCCCCCCCCc---c--CCCCCcEEEccCccc
Q 043053 326 EGSIPSTLASCSN-LQALDLSHNSLTASVPAGLFQLQ--NLTKLLLISNDISGSIPPEI---G--NCSSLVRLRVGNNRI 397 (1058)
Q Consensus 326 ~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~~~~---~--~l~~L~~L~L~~N~l 397 (1058)
+ .+|..+..+++ |+.|+|++|+++ .+|..+..+. +|+.|+|++|++.+.+|... . .+++|+.|+|++|+|
T Consensus 608 ~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L 685 (876)
T 4ecn_A 608 E-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEI 685 (876)
T ss_dssp S-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCC
T ss_pred c-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcC
Confidence 4 34444555555 666666666655 4555544433 26666666666655443221 1 234677777777777
Q ss_pred cCCccccccCccccceeeccCccCCCCCCCcccC-------CcccchhhccCCccCCCCccccc--cCCCCCeeecCCCc
Q 043053 398 AGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGD-------CTELQMIDLSHNTLQGSLPNSLS--SLSGLQVLDVSDNR 468 (1058)
Q Consensus 398 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-------l~~L~~L~l~~N~l~~~~~~~~~--~l~~L~~L~L~~N~ 468 (1058)
+.+.+..+..+++|++|+|++|+|+.+.+..+.. +++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+
T Consensus 686 ~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~ 764 (876)
T 4ecn_A 686 QKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNC 764 (876)
T ss_dssp CSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSC
T ss_pred CccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCC
Confidence 7655555556777777777777777333333322 237777777777777 4566665 77777777777777
Q ss_pred cccCCccccccccccccccccc------ccCCCCCCCcccCCcccccccccCCcccCCCC
Q 043053 469 FSGQIPASLGRLVSLNKIILSK------NLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVP 522 (1058)
Q Consensus 469 l~~~~~~~~~~l~~L~~L~Ls~------N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 522 (1058)
|++ +|..+..+++|+.|+|++ |++.+.+|..|..+++|+.|+|++|++ +.+|
T Consensus 765 L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip 822 (876)
T 4ecn_A 765 FSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVD 822 (876)
T ss_dssp CSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCC
T ss_pred CCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccC
Confidence 775 566666666777776655 555555565666666666666666655 3444
No 33
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.1e-47 Score=454.41 Aligned_cols=455 Identities=17% Similarity=0.202 Sum_probs=326.2
Q ss_pred cEEEccCCcCCCCCCCCCCCCCcccEEecCCCCCCCCCChhhcCcccCCEEeccccCCCCccccccccchhhhHHhhhhc
Q 043053 27 QTLVISDANLTGSIPFDIGDCVGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNSNQLTGKIPVELSNCKSLRKLLLFDN 106 (1058)
Q Consensus 27 ~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~L~~n 106 (1058)
++|++++|+++ .+|..+. ++|++|+|++|++++..|..+.++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57899999998 6888776 79999999999998666688999999999999999998777888888888888888888
Q ss_pred cccCCChhhhcccccchhhhcCCCccccCCCCccccCCCCCceecccCccccc-cCCccccCCCccceeeeecccccccc
Q 043053 107 ALAGNIPAELGRLSNLEEMRAGGNKDIVGKIPAELGDCSNMTALGLADTQVSG-SLPASLGKLSKLQTLSIYTTMISGEI 185 (1058)
Q Consensus 107 ~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~-~~~~~l~~l~~L~~L~l~~n~i~~~~ 185 (1058)
.+. .+|.. .+++|++|++++|. +.+ ..|..|+++++|++|++++|.+.+
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~-------------------------l~~~~~p~~~~~l~~L~~L~L~~n~l~~-- 129 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNA-------------------------FDALPICKEFGNMSQLKFLGLSTTHLEK-- 129 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSC-------------------------CSSCCCCGGGGGCTTCCEEEEEESSCCG--
T ss_pred cee-ecCcc--ccCCccEEeccCCc-------------------------cccccchhhhccCCcceEEEecCcccch--
Confidence 877 56654 55555555555554 433 234445555555555555554443
Q ss_pred CccccCCCCc--cEEEccCCcC--CCCCCCCcCCCC-CcceeecccccccCCCCc-cccCcCCccEEEeecCC-------
Q 043053 186 PAEIGNCSEL--VSLFLYENSL--SGSIPPEIGKLK-KLEELFLWQNSLVGAIPE-EIGNCTSLKMIDFSLNS------- 252 (1058)
Q Consensus 186 ~~~l~~l~~L--~~L~L~~n~l--~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~-~l~~l~~L~~L~L~~n~------- 252 (1058)
..+..+++| +.|++++|.+ .+..|..+..+. +...+++++|.+.+..+. .+..+++|+.|++++|.
T Consensus 130 -~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 208 (520)
T 2z7x_B 130 -SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSY 208 (520)
T ss_dssp -GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHH
T ss_pred -hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccce
Confidence 223334444 5555555555 444444444443 223344455544433332 34455555555555554
Q ss_pred CcCcCCccccccCCcceeecccCccCCCcccccc---ccccchhhhhcCCcccCcCCCcc-----cccchhhhhhccCcc
Q 043053 253 LSGTIPLSIGGLSELEEFMISDNNVSGSIPANLA---NATNLVQLQLDTNQISGLIPPEI-----GMLSKLTVFFAWQNQ 324 (1058)
Q Consensus 253 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~---~l~~L~~L~L~~N~i~~~~~~~~-----~~l~~L~~L~l~~N~ 324 (1058)
+.+.++ .++.+++|+.|++++|.+.+..+..+. ..++|++|++++|++++..|..+ +.+++|+.+++++|.
T Consensus 209 ~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~ 287 (520)
T 2z7x_B 209 FLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDV 287 (520)
T ss_dssp HHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECC
T ss_pred eecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccc
Confidence 333333 455556666666665555432221111 13466666666666666666666 667777777777777
Q ss_pred cCCCCChhhhcc---CcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccC--
Q 043053 325 LEGSIPSTLASC---SNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAG-- 399 (1058)
Q Consensus 325 l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-- 399 (1058)
+ ......+..+ .+|+.|++++|.+.... .+..+++|++|++++|++++..|..++++++|++|+|++|+|++
T Consensus 288 ~-~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~ 364 (520)
T 2z7x_B 288 F-GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELS 364 (520)
T ss_dssp C-CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHH
T ss_pred e-ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccc
Confidence 7 2322455554 67999999999987432 12578999999999999998899999999999999999999997
Q ss_pred CccccccCccccceeeccCccCCCCCC-CcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCccccc
Q 043053 400 LIPREIGGLKTLNFLDLSSNRLSGSVP-DEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLG 478 (1058)
Q Consensus 400 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 478 (1058)
..|..|..+++|++|+|++|++++.+| ..+..+++|+.|++++|++++..|..+. ++|++|++++|+|+ .+|..+.
T Consensus 365 ~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~ 441 (520)
T 2z7x_B 365 KIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVV 441 (520)
T ss_dssp HHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGG
T ss_pred cchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhh
Confidence 445779999999999999999998444 4588999999999999999887776665 79999999999998 7888888
Q ss_pred ccccccccccccccCCCCCCCcccCCcccccccccCCcccCCCC
Q 043053 479 RLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVP 522 (1058)
Q Consensus 479 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 522 (1058)
.+++|+.|+|++|+|++..+..|..+++|+.|++++|++++..+
T Consensus 442 ~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 442 KLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp GCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 99999999999999996444459999999999999999987654
No 34
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.2e-46 Score=462.78 Aligned_cols=444 Identities=18% Similarity=0.207 Sum_probs=302.3
Q ss_pred CCCceecccCccccccCCccccCCCccceeee-eccccccccCccc----------------------------------
Q 043053 145 SNMTALGLADTQVSGSLPASLGKLSKLQTLSI-YTTMISGEIPAEI---------------------------------- 189 (1058)
Q Consensus 145 ~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l-~~n~i~~~~~~~l---------------------------------- 189 (1058)
..++.|+|+++.+.|.+|.+|++|++|+.|+| ++|.+.+..|...
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57888899999988888989999999999999 7777665533111
Q ss_pred -----------------cCCCCccEEEccC--CcCCCCCCCCcCCCCCcceeecccccccC-----------------CC
Q 043053 190 -----------------GNCSELVSLFLYE--NSLSGSIPPEIGKLKKLEELFLWQNSLVG-----------------AI 233 (1058)
Q Consensus 190 -----------------~~l~~L~~L~L~~--n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-----------------~~ 233 (1058)
.....++.+.+.. |.+++ +|..|+++++|+.|+|++|.+++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 1112233333332 56665 66677777777777777777776 26
Q ss_pred Ccccc--CcCCccEEEeecCCCcCcCCccccccCCcceeecccCc-cCC-Cccccccccc-------cchhhhhcCCccc
Q 043053 234 PEEIG--NCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMISDNN-VSG-SIPANLANAT-------NLVQLQLDTNQIS 302 (1058)
Q Consensus 234 ~~~l~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~-~~~~~~~~l~-------~L~~L~L~~N~i~ 302 (1058)
|..++ ++++|++|+|++|.+.+.+|..|+++++|+.|+|++|+ +++ .+|..+..++ +|++|+|++|+++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 66655 77777777777777777777777777777777777776 665 5666555554 7777777777777
Q ss_pred CcCCC--cccccchhhhhhccCcccCCCCChhhhccCcccccccccccccccCccccccccc-chhhhccccCCCCCCCC
Q 043053 303 GLIPP--EIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQN-LTKLLLISNDISGSIPP 379 (1058)
Q Consensus 303 ~~~~~--~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~ 379 (1058)
.+|. .|+.+++|+.|++++|+++ .+| .|..+++|+.|+|++|++. .+|..+..+++ |++|+|++|.++ .+|.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 5555 6777777777777777777 555 6777777777777777777 56666777776 777777777776 5566
Q ss_pred CccCCCC--CcEEEccCccccCCccccc---c--CccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccc
Q 043053 380 EIGNCSS--LVRLRVGNNRIAGLIPREI---G--GLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNS 452 (1058)
Q Consensus 380 ~~~~l~~--L~~L~L~~N~l~~~~~~~~---~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 452 (1058)
.+..++. |+.|+|++|++.+.+|... . .+++|++|+|++|+++.+.+..+..+++|+.|+|++|+|+.+.+..
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~ 716 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENS 716 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTS
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHH
Confidence 6665543 7777777777766544322 1 2346777777777777333333346677777777777777433333
Q ss_pred ccc-------CCCCCeeecCCCccccCCccccc--ccccccccccccccCCCCCCCcccCCcccccccccCCcccCCCCh
Q 043053 453 LSS-------LSGLQVLDVSDNRFSGQIPASLG--RLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVPM 523 (1058)
Q Consensus 453 ~~~-------l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 523 (1058)
+.. +++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+|++|+
T Consensus 717 ~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~------- 787 (876)
T 4ecn_A 717 LKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR------- 787 (876)
T ss_dssp SSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB-------
T ss_pred hccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC-------
Confidence 332 226777777777776 5666665 67777777777777775 56667777777777777765
Q ss_pred hhhhhHHHHHHHhhccCCCCCCCCccccccccccEEecCCCcccCCCCcccccCcceeEEEecccccccCCCcc-ccccC
Q 043053 524 ELGQIEALEIALNLSCNGLTGPIPAQISALNKLSILDLSHNKLEGNLNPLAQLDNLVSLNISYNKFTGYLPDNK-LFRQL 602 (1058)
Q Consensus 524 ~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~-~~~~~ 602 (1058)
++++|++.+.+|..|.++++|+.|+|++|+|...+..+. ++|+.|+|++|++....+... .....
T Consensus 788 ------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~ 853 (876)
T 4ecn_A 788 ------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDIRKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEA 853 (876)
T ss_dssp ------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCCCBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHT
T ss_pred ------------CcccccccccChHHHhcCCCCCEEECCCCCCCccCHhhc--CCCCEEECCCCCCCccChHHccccccc
Confidence 356799999999999999999999999999965655554 699999999999986554321 22234
Q ss_pred CCccccCCcccc--cCC
Q 043053 603 SPTDLAGNEGLC--SSR 617 (1058)
Q Consensus 603 ~~~~~~~n~~~c--~~~ 617 (1058)
....+.+|++.| +|+
T Consensus 854 ~~~~L~~n~~~~I~gC~ 870 (876)
T 4ecn_A 854 GMYVLLYDKTQDIRGCD 870 (876)
T ss_dssp TCCEEECCTTSEEESCG
T ss_pred hheeecCCCccccCCCC
Confidence 455666666544 554
No 35
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.5e-46 Score=451.09 Aligned_cols=450 Identities=22% Similarity=0.218 Sum_probs=283.0
Q ss_pred EeecCCCCCCCCCccccCCCCCcEEEccCCcCCCCCCCCCCCCCcccEEecCCCCCCCCCChhhcCcccCCEEeccccCC
Q 043053 5 ITIQSVPLQLPIPTNLSSFKHLQTLVISDANLTGSIPFDIGDCVGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNSNQL 84 (1058)
Q Consensus 5 ~~~~~~~~~~~~p~~~~~~~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n~~ 84 (1058)
+.+..-.++ .+|..+. ++|++|+|++|++++..|..++++++|++|+|++|++++..|..++++++|++|+|++|++
T Consensus 5 l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 81 (520)
T 2z7x_B 5 VDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKL 81 (520)
T ss_dssp EECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCC
T ss_pred EecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCce
Confidence 344444443 5666555 8999999999999966667899999999999999999977789999999999999999999
Q ss_pred CCccccccccchhhhHHhhhhccccC-CChhhhcccccchhhhcCCCccccCCCCccccCCCCC--ceecccCccc--cc
Q 043053 85 TGKIPVELSNCKSLRKLLLFDNALAG-NIPAELGRLSNLEEMRAGGNKDIVGKIPAELGDCSNM--TALGLADTQV--SG 159 (1058)
Q Consensus 85 ~~~~p~~l~~l~~L~~L~L~~n~~~~-~~p~~l~~l~~L~~L~l~~~~~~~~~l~~~l~~l~~L--~~L~l~~~~~--~~ 159 (1058)
+ .+|.. .+++|++|+|++|.+.+ .+|..++++++|++|++++|. +.. ..++.+++| ++|++++|.+ .+
T Consensus 82 ~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~--l~~--~~~~~l~~L~L~~L~l~~n~l~~~~ 154 (520)
T 2z7x_B 82 V-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTH--LEK--SSVLPIAHLNISKVLLVLGETYGEK 154 (520)
T ss_dssp C-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESS--CCG--GGGGGGTTSCEEEEEEEECTTTTSS
T ss_pred e-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcc--cch--hhccccccceeeEEEeecccccccc
Confidence 8 78877 89999999999999986 467888888888888888775 211 234445555 5555555555 44
Q ss_pred cCCccccCCCccceeeeeccccccccCccccCCCCccEEEccCCcCCCCCC-CCcCCCCCcceeeccccc-------ccC
Q 043053 160 SLPASLGKLSKLQTLSIYTTMISGEIPAEIGNCSELVSLFLYENSLSGSIP-PEIGKLKKLEELFLWQNS-------LVG 231 (1058)
Q Consensus 160 ~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~-------l~~ 231 (1058)
..|..+..+.. +...+++++|.+.+.++ ..+..+++|+.|++++|. +.+
T Consensus 155 ~~~~~l~~l~~-----------------------~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~ 211 (520)
T 2z7x_B 155 EDPEGLQDFNT-----------------------ESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLS 211 (520)
T ss_dssp CCTTTTTTCCE-----------------------EEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHH
T ss_pred ccccccccccc-----------------------ceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeec
Confidence 44555444431 12233444444433322 233344444444444443 322
Q ss_pred CCCccccCcCCccEEEeecCCCcCcCCcccc---ccCCcceeecccCccCCCccccc-----cccccchhhhhcCCcccC
Q 043053 232 AIPEEIGNCTSLKMIDFSLNSLSGTIPLSIG---GLSELEEFMISDNNVSGSIPANL-----ANATNLVQLQLDTNQISG 303 (1058)
Q Consensus 232 ~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~---~l~~L~~L~l~~n~l~~~~~~~~-----~~l~~L~~L~L~~N~i~~ 303 (1058)
.++ .+..+++|+.|++++|.+.+..+..+. .+++|++|++++|++.+..|..+ ..+++|+.+++++|.+ .
T Consensus 212 ~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~ 289 (520)
T 2z7x_B 212 ILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-G 289 (520)
T ss_dssp HHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-C
T ss_pred chh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-e
Confidence 222 344444555555544444432111111 12345555555555544444444 4455555555555554 2
Q ss_pred cCCCccccc---chhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCC--CCC
Q 043053 304 LIPPEIGML---SKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISG--SIP 378 (1058)
Q Consensus 304 ~~~~~~~~l---~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~ 378 (1058)
+....+..+ .+|+.|++++|.+.... .+..+++|++|++++|++++..|..+..+++|++|++++|++++ ..|
T Consensus 290 ~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~ 367 (520)
T 2z7x_B 290 FPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIA 367 (520)
T ss_dssp SCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHH
T ss_pred cchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccch
Confidence 211233332 33555555555544321 12456666677777777666666666666677777777776664 334
Q ss_pred CCccCCCCCcEEEccCccccC-CccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCC
Q 043053 379 PEIGNCSSLVRLRVGNNRIAG-LIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLS 457 (1058)
Q Consensus 379 ~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 457 (1058)
..+..+++|++|++++|++++ +.+..|..+++|++|+|++|++++..|..+. ++|+.|++++|+|+ .+|..+..++
T Consensus 368 ~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~ 444 (520)
T 2z7x_B 368 EMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLE 444 (520)
T ss_dssp HHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCT
T ss_pred HHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCC
Confidence 556777777777777777776 4334567777777777777777665555543 67777777777777 4566666777
Q ss_pred CCCeeecCCCccccCCcc-cccccccccccccccccCCC
Q 043053 458 GLQVLDVSDNRFSGQIPA-SLGRLVSLNKIILSKNLFSG 495 (1058)
Q Consensus 458 ~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~ 495 (1058)
+|++|++++|+|++ +|. .|..+++|+.|+|++|++.+
T Consensus 445 ~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c 482 (520)
T 2z7x_B 445 ALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDC 482 (520)
T ss_dssp TCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCcc
Confidence 77777777777773 444 37777777777787777764
No 36
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4e-45 Score=450.54 Aligned_cols=536 Identities=20% Similarity=0.193 Sum_probs=378.4
Q ss_pred EEEccCCcCCCCCCCCCCCCCcccEEecCCCCCCCCCChhhcCcccCCEEeccccCCCCccccccccchhhhHHhhhhcc
Q 043053 28 TLVISDANLTGSIPFDIGDCVGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNSNQLTGKIPVELSNCKSLRKLLLFDNA 107 (1058)
Q Consensus 28 ~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~L~~n~ 107 (1058)
+.+-++.+++ .+|..+- .++++|||++|+|++..|.+|.++++|++|+|++|++.+..|..|.+|++|++|+|++|+
T Consensus 35 ~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~ 111 (635)
T 4g8a_A 35 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 111 (635)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCc
Confidence 4456666665 5666553 367777777777773334567777777777777777775555567777777777777777
Q ss_pred ccCCChhhhcccccchhhhcCCCccccCCCCc-cccCCCCCceecccCccccc-cCCccccCCCccceeeeecccccccc
Q 043053 108 LAGNIPAELGRLSNLEEMRAGGNKDIVGKIPA-ELGDCSNMTALGLADTQVSG-SLPASLGKLSKLQTLSIYTTMISGEI 185 (1058)
Q Consensus 108 ~~~~~p~~l~~l~~L~~L~l~~~~~~~~~l~~-~l~~l~~L~~L~l~~~~~~~-~~~~~l~~l~~L~~L~l~~n~i~~~~ 185 (1058)
+.+..+..|++|++|++|++++|. +..++. .++++++|++|++++|++.+ ..|..++.+++|++|++++|++.+..
T Consensus 112 l~~l~~~~f~~L~~L~~L~Ls~N~--l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 189 (635)
T 4g8a_A 112 IQSLALGAFSGLSSLQKLVAVETN--LASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 189 (635)
T ss_dssp CCEECGGGGTTCTTCCEEECTTSC--CCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEEC
T ss_pred CCCCCHHHhcCCCCCCEEECCCCc--CCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccc
Confidence 763333557777777777777775 444544 46777777888887777764 35667777788888888888777666
Q ss_pred CccccCCCCc----cEEEccCCcCCCCCCCCcCCCCCcceeecccccccCC-CCccccCcCCccEEEeecCCCc------
Q 043053 186 PAEIGNCSEL----VSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGA-IPEEIGNCTSLKMIDFSLNSLS------ 254 (1058)
Q Consensus 186 ~~~l~~l~~L----~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~L~~n~l~------ 254 (1058)
+..+..+.++ ..++++.|.+....+. ......++.|++.+|..... .+..+..+..++...+..+...
T Consensus 190 ~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~-~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~ 268 (635)
T 4g8a_A 190 CTDLRVLHQMPLLNLSLDLSLNPMNFIQPG-AFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLE 268 (635)
T ss_dssp GGGGHHHHTCTTCCCEEECTTCCCCEECTT-TTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCS
T ss_pred cccccchhhhhhhhhhhhcccCcccccCcc-cccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccc
Confidence 6666654443 3677777777743333 33444567777777654321 2234556666666665443322
Q ss_pred CcCCccccccCCcceeecccCccCCC---ccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCCh
Q 043053 255 GTIPLSIGGLSELEEFMISDNNVSGS---IPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPS 331 (1058)
Q Consensus 255 ~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 331 (1058)
......+..+..+....+..+..... ....+..+.+++.+++.+|.+... ..+.....++.|++.+|.+....+
T Consensus 269 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~~~~~~- 345 (635)
T 4g8a_A 269 KFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPT- 345 (635)
T ss_dssp CCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC--GGGGSCCCCSEEEEESCEESSCCC-
T ss_pred cccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccc--cccccchhhhhhhcccccccCcCc-
Confidence 22233444555555555554433321 233455566777777777776654 235556677777888877765543
Q ss_pred hhhccCcccccccccccccccCcccccccccchhhhccccCCCC--CCCCCccCCCCCcEEEccCccccCCccccccCcc
Q 043053 332 TLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISG--SIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLK 409 (1058)
Q Consensus 332 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 409 (1058)
..+..|+.++++.|.+.. +.....+++|+.|++++|.+.. ..+..+..+.+|+.|++..|.+... +..+..++
T Consensus 346 --~~l~~L~~l~l~~n~~~~--~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~-~~~~~~l~ 420 (635)
T 4g8a_A 346 --LKLKSLKRLTFTSNKGGN--AFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITM-SSNFLGLE 420 (635)
T ss_dssp --CBCTTCCEEEEESCCSCC--BCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEE-CSCCTTCT
T ss_pred --ccchhhhhcccccccCCC--Ccccccccccccchhhccccccccccccchhhhhhhhhhhccccccccc-cccccccc
Confidence 345677788888887763 2334567888888888888753 3455566778899999999988754 55688899
Q ss_pred ccceeeccCccCCCCC-CCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccc-cCCcccccccccccccc
Q 043053 410 TLNFLDLSSNRLSGSV-PDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFS-GQIPASLGRLVSLNKII 487 (1058)
Q Consensus 410 ~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~ 487 (1058)
+|+.+++++|...... +..|..+++++.+++++|.+.+..+..+..++.|+.|+|++|.+. +..|..|..+++|+.|+
T Consensus 421 ~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~ 500 (635)
T 4g8a_A 421 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 500 (635)
T ss_dssp TCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred cccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEE
Confidence 9999999888776544 356788899999999999999888889999999999999999754 45778899999999999
Q ss_pred cccccCCCCCCCcccCCcccccccccCCcccCCCChhhhhhHHHHHHHhhccCCCCCCCCccccccccccEEecCCCccc
Q 043053 488 LSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVPMELGQIEALEIALNLSCNGLTGPIPAQISALNKLSILDLSHNKLE 567 (1058)
Q Consensus 488 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 567 (1058)
|++|+|++..|..|..+++|++|+|++|+|++..| ..|.++++|+.|||++|+|+
T Consensus 501 Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~-------------------------~~~~~l~~L~~L~Ls~N~l~ 555 (635)
T 4g8a_A 501 LSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT-------------------------FPYKCLNSLQVLDYSLNHIM 555 (635)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCC-------------------------GGGTTCTTCCEEECTTSCCC
T ss_pred CCCCccCCcChHHHcCCCCCCEEECCCCcCCCCCh-------------------------hHHhCCCCCCEEECCCCcCC
Confidence 99999999889999999999999999999885433 44577889999999999999
Q ss_pred CCC-Cccccc-CcceeEEEecccccccCCCccccccC
Q 043053 568 GNL-NPLAQL-DNLVSLNISYNKFTGYLPDNKLFRQL 602 (1058)
Q Consensus 568 ~~~-~~~~~l-~~L~~L~l~~N~l~~~~~~~~~~~~~ 602 (1058)
+.+ ..+..+ ++|+.|++++|+|+|.|...+..+|+
T Consensus 556 ~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~~~~wl 592 (635)
T 4g8a_A 556 TSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWI 592 (635)
T ss_dssp BCCSSCTTCCCTTCCEEECTTCCBCCSGGGHHHHHHH
T ss_pred CCCHHHHHhhhCcCCEEEeeCCCCcccCCcHHHHHHH
Confidence 876 456777 68999999999999999765544444
No 37
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-44 Score=410.84 Aligned_cols=264 Identities=23% Similarity=0.288 Sum_probs=201.0
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|.+.+.||+|+||+||+| +..+|+.||||++.... ......+.+.+|+++|++++|||||++++++..
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~---------~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 124 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF---------DVVTNAKRTLRELKILKHFKHDNIIAIKDILRP 124 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT---------SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccc---------cchHHHHHHHHHHHHHHhcCCCCcceEeeeeec
Confidence 57999999999999999999 56789999999985331 233345788999999999999999999998764
Q ss_pred C------CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCee
Q 043053 783 R------NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPY 856 (1058)
Q Consensus 783 ~------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~k 856 (1058)
. +..|+|||||+ |+|.+++.. ...+++..+..++.||+.||+|||++ +||||||||+|||++.++.+|
T Consensus 125 ~~~~~~~~~~~ivmE~~~-g~L~~~i~~--~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~K 198 (398)
T 4b99_A 125 TVPYGEFKSVYVVLDLME-SDLHQIIHS--SQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELK 198 (398)
T ss_dssp SSCTTTCCCEEEEEECCS-EEHHHHHTS--SSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEE
T ss_pred ccccccCCEEEEEEeCCC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEE
Confidence 3 56799999996 689999976 46799999999999999999999999 999999999999999999999
Q ss_pred eeccccceeccCCC--cccccccccCcCCccCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHH
Q 043053 857 IADFGLAKLVDDGD--FARSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVR 933 (1058)
Q Consensus 857 l~DfGl~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~ 933 (1058)
|+|||+|+.+.... ........+||+.|||||++.+. .++.++||||+||++|||++|+.||.+.. .......+.
T Consensus 199 i~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~--~~~~l~~I~ 276 (398)
T 4b99_A 199 IGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN--YVHQLQLIM 276 (398)
T ss_dssp ECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS--HHHHHHHHH
T ss_pred EeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC--HHHHHHHHH
Confidence 99999998764432 12234567899999999998775 56899999999999999999999997542 112111111
Q ss_pred hhcCc-c--ccC-----------CCCCCCCchhHHH-----HHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 934 QKKGI-Q--VLD-----------PSLLSRPESEIDE-----MLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 934 ~~~~~-~--~~~-----------~~~~~~~~~~~~~-----~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
..... . ... .......+..... ...+.+++.+||..||++|||++|++++-
T Consensus 277 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 346 (398)
T 4b99_A 277 MVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHP 346 (398)
T ss_dssp HHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSG
T ss_pred HhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCH
Confidence 11100 0 000 0000000100111 12345688999999999999999998864
No 38
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=3.2e-44 Score=403.92 Aligned_cols=200 Identities=27% Similarity=0.385 Sum_probs=170.5
Q ss_pred HHhhccccceeccccceEEEEEEe----cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccce
Q 043053 702 VLKCLVDANVIGKGCSGVVYRADM----DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVRF 776 (1058)
Q Consensus 702 ~~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~ 776 (1058)
+.++|++.+.||+|+||+||+|.. .+++.||||++.+. ....++.+|+++++.+ +|||||++
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~-------------~~~~~~~~E~~~l~~~~~h~nIv~l 85 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT-------------SHPIRIAAELQCLTVAGGQDNVMGV 85 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT-------------SCHHHHHHHHHHHHHTCSBTTBCCC
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc-------------cCHHHHHHHHHHHHHhcCCCCCceE
Confidence 446799999999999999999943 25788999988432 2245788999999998 59999999
Q ss_pred eeEEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCC-CCe
Q 043053 777 LGCCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLE-FEP 855 (1058)
Q Consensus 777 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~-~~~ 855 (1058)
++++.+++..|+||||++||+|.++++ .+++..+..++.|++.||+|||++ |||||||||+|||++.+ +.+
T Consensus 86 ~~~~~~~~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~ 157 (361)
T 4f9c_A 86 KYCFRKNDHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKY 157 (361)
T ss_dssp SEEEEETTEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEE
T ss_pred EEEEEECCEEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeE
Confidence 999999999999999999999999984 388999999999999999999999 99999999999999877 799
Q ss_pred eeeccccceeccCCCcc--------------------------cccccccCcCCccCccccccC-CCCcccchhhHHHHH
Q 043053 856 YIADFGLAKLVDDGDFA--------------------------RSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSYGVVV 908 (1058)
Q Consensus 856 kl~DfGl~~~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvvl 908 (1058)
||+|||+|+........ ......+||+.|||||++.+. .++.++||||+||++
T Consensus 158 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il 237 (361)
T 4f9c_A 158 ALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIF 237 (361)
T ss_dssp EECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHH
T ss_pred EECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHH
Confidence 99999999865432210 112346799999999998775 589999999999999
Q ss_pred HHHHhCCCCCCCCC
Q 043053 909 LEVLTGKQPIDPTI 922 (1058)
Q Consensus 909 ~elltg~~P~~~~~ 922 (1058)
|||++|+.||....
T Consensus 238 ~ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 238 LSLLSGRYPFYKAS 251 (361)
T ss_dssp HHHHHTCSSSSCCS
T ss_pred HHHHHCCCCCCCCC
Confidence 99999999997543
No 39
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1e-43 Score=419.00 Aligned_cols=256 Identities=20% Similarity=0.218 Sum_probs=202.9
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|.+.++||+|+||+||+| +..+|+.||||++.+...... ...........++.+++.++|||||+++++|.+
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~-----~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~ 263 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-----QGETLALNERIMLSLVSTGDCPFIVCMSYAFHT 263 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT-----TCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchh-----hhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE
Confidence 67999999999999999999 566899999999965433211 112222333455778888899999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
++..|+|||||+||+|.+++... +.+++..+..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+
T Consensus 264 ~~~lylVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGl 338 (689)
T 3v5w_A 264 PDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGL 338 (689)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccce
Confidence 99999999999999999999864 6799999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccc-cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcccc
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGY-MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVL 941 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1058)
|+..... ...+.+||+.|||||++. +..|+.++||||+||++|||++|+.||......... ...+.... .
T Consensus 339 A~~~~~~----~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~--~i~~~i~~---~ 409 (689)
T 3v5w_A 339 ACDFSKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRMTLT---M 409 (689)
T ss_dssp CEECSSC----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHH--HHHHHHHH---C
T ss_pred eeecCCC----CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHHhhcC---C
Confidence 9877543 234678999999999986 457999999999999999999999999754332221 11111111 1
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHH
Q 043053 942 DPSLLSRPESEIDEMLQALGVALLCVNASPDERPT-----MKDVAAML 984 (1058)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt-----~~~v~~~l 984 (1058)
....+...+. .+.+++..||++||++|++ ++||.++-
T Consensus 410 ~~~~p~~~S~------~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~Hp 451 (689)
T 3v5w_A 410 AVELPDSFSP------ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP 451 (689)
T ss_dssp CCCCCTTSCH------HHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSG
T ss_pred CCCCCccCCH------HHHHHHHHHccCCHhHCCCCCCCCHHHHhcCc
Confidence 1122222232 2345778899999999998 68887654
No 40
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.5e-43 Score=436.35 Aligned_cols=540 Identities=21% Similarity=0.223 Sum_probs=391.6
Q ss_pred CCCCCCCCCCcc---cEEecCCCCCCCCCChhhcCcccCCEEeccccCCCCccccccccchhhhHHhhhhccccCCChhh
Q 043053 39 SIPFDIGDCVGL---IVLDFSSNNLVGTLPSSLGKLHNLEELILNSNQLTGKIPVELSNCKSLRKLLLFDNALAGNIPAE 115 (1058)
Q Consensus 39 ~~p~~l~~l~~L---~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~ 115 (1058)
.+|.....|... +..+=++.+++ .+|..+- .++++|||++|+|++..|..|.++++|++|+|++|.+.+..|..
T Consensus 19 ~~p~~~~~c~~~~~~~~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~ 95 (635)
T 4g8a_A 19 SIPESWEPCVEVVPNITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGA 95 (635)
T ss_dssp ------CCSEEEETTTEEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTT
T ss_pred CCCCCCCCccccCCCCEEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhH
Confidence 456655555433 24455566787 8897653 48999999999999656678999999999999999998545567
Q ss_pred hcccccchhhhcCCCccccCCCCc-cccCCCCCceecccCccccccCCccccCCCccceeeeecccccc-ccCccccCCC
Q 043053 116 LGRLSNLEEMRAGGNKDIVGKIPA-ELGDCSNMTALGLADTQVSGSLPASLGKLSKLQTLSIYTTMISG-EIPAEIGNCS 193 (1058)
Q Consensus 116 l~~l~~L~~L~l~~~~~~~~~l~~-~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~i~~-~~~~~l~~l~ 193 (1058)
|++|++|++|++++|. +..+|. .|+.+++|++|++++|++++..+..|+++++|++|++++|.+.+ ..|..++.++
T Consensus 96 f~~L~~L~~L~Ls~N~--l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~ 173 (635)
T 4g8a_A 96 YQSLSHLSTLILTGNP--IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLT 173 (635)
T ss_dssp TTTCTTCCEEECTTCC--CCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCT
T ss_pred hcCCCCCCEEEccCCc--CCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccch
Confidence 9999999999999997 566665 58899999999999999997777789999999999999999976 4678899999
Q ss_pred CccEEEccCCcCCCCCCCCcCCCCCcc----eeecccccccCCCCccccCcCCccEEEeecCCCcC-cCCccccccCCcc
Q 043053 194 ELVSLFLYENSLSGSIPPEIGKLKKLE----ELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSG-TIPLSIGGLSELE 268 (1058)
Q Consensus 194 ~L~~L~L~~n~l~~~~~~~~~~l~~L~----~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~ 268 (1058)
+|++|+|++|.+++..+..|..+.+++ .++++.|.+....+..+ ....+..+++++|.... ..+..+.++..++
T Consensus 174 ~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~ 252 (635)
T 4g8a_A 174 NLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLE 252 (635)
T ss_dssp TCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCE
T ss_pred hhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhcccccccccchhhcCCcccc
Confidence 999999999999987787777665544 68899999985555444 44567889999987653 3345567778777
Q ss_pred eeecccCc------cCCCccccccccccchhhhhcCCcccC---cCCCcccccchhhhhhccCcccCCCCChhhhccCcc
Q 043053 269 EFMISDNN------VSGSIPANLANATNLVQLQLDTNQISG---LIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNL 339 (1058)
Q Consensus 269 ~L~l~~n~------l~~~~~~~~~~l~~L~~L~L~~N~i~~---~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 339 (1058)
...+..+. +.......+..+..+..+++..+.... .....+..+.+++.+.+.++.+.... .+....+|
T Consensus 253 ~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L 330 (635)
T 4g8a_A 253 VHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGW 330 (635)
T ss_dssp EEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCC
T ss_pred cccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccccc--ccccchhh
Confidence 76665443 222333445555555555555443322 23344556666777777777665432 35556677
Q ss_pred cccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccC--CccccccCccccceeecc
Q 043053 340 QALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAG--LIPREIGGLKTLNFLDLS 417 (1058)
Q Consensus 340 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls 417 (1058)
+.|++++|.+....+ ..+..|+.+++..|.+... ..+..+++|+.|++++|.+.. ..+..+..+.+|++|+++
T Consensus 331 ~~L~l~~~~~~~~~~---~~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~ 405 (635)
T 4g8a_A 331 QHLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLS 405 (635)
T ss_dssp SEEEEESCEESSCCC---CBCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECC
T ss_pred hhhhcccccccCcCc---ccchhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhcc
Confidence 777777777764332 2345666777777766532 234567777777777777753 234455566777777777
Q ss_pred CccCCCCCCCcccCCcccchhhccCCccCCCC-ccccccCCCCCeeecCCCccccCCcccccccccccccccccccCC-C
Q 043053 418 SNRLSGSVPDEIGDCTELQMIDLSHNTLQGSL-PNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFS-G 495 (1058)
Q Consensus 418 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~ 495 (1058)
.|.+. ..+..+..+++|+.+++++|.+.... +..|..+.+++.+++++|.+.+..+..+..++.|+.|+|++|.+. +
T Consensus 406 ~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~ 484 (635)
T 4g8a_A 406 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 484 (635)
T ss_dssp SCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGG
T ss_pred ccccc-cccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccc
Confidence 77766 34455667777777777777655433 345677777777777777777777777777777777777777643 3
Q ss_pred CCCCcccCCcccccccccCCcccCCCChhhhhhHHHHHHHhhccCCCCCCCCccccccccccEEecCCCcccCCC-Cccc
Q 043053 496 PIPSSLGLCSSLQLLDLSSNQLTGSVPMELGQIEALEIALNLSCNGLTGPIPAQISALNKLSILDLSHNKLEGNL-NPLA 574 (1058)
Q Consensus 496 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~ 574 (1058)
..|..|..+++|+.|+|++|+|++ ..|.+|.++++|++|+|++|+|++.+ ..+.
T Consensus 485 ~~~~~~~~l~~L~~L~Ls~N~L~~-------------------------l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~ 539 (635)
T 4g8a_A 485 FLPDIFTELRNLTFLDLSQCQLEQ-------------------------LSPTAFNSLSSLQVLNMSHNNFFSLDTFPYK 539 (635)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCE-------------------------ECTTTTTTCTTCCEEECTTSCCCBCCCGGGT
T ss_pred cCchhhhhccccCEEECCCCccCC-------------------------cChHHHcCCCCCCEEECCCCcCCCCChhHHh
Confidence 466777777777777777777764 44556688999999999999999976 4688
Q ss_pred ccCcceeEEEecccccccCCCcc--ccccCCCccccCCcccccCC
Q 043053 575 QLDNLVSLNISYNKFTGYLPDNK--LFRQLSPTDLAGNEGLCSSR 617 (1058)
Q Consensus 575 ~l~~L~~L~l~~N~l~~~~~~~~--~~~~~~~~~~~~n~~~c~~~ 617 (1058)
.+++|+.|++++|++++..|..- ....++..++.+|||.|+|.
T Consensus 540 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 540 CLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp TCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 99999999999999999988742 23678889999999999885
No 41
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1e-43 Score=429.94 Aligned_cols=458 Identities=19% Similarity=0.193 Sum_probs=316.7
Q ss_pred CCCcEEEccCCcCCCCCCCCCCCCCcccEEecCCCCCCCCCChhhcCcccCCEEeccccCCCCccccccccchhhhHHhh
Q 043053 24 KHLQTLVISDANLTGSIPFDIGDCVGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNSNQLTGKIPVELSNCKSLRKLLL 103 (1058)
Q Consensus 24 ~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~L 103 (1058)
...+++++++++++ .+|..+. ++|++|+|++|+|++..|.+++++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 31 ~~~~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 107 (562)
T 3a79_B 31 ELESMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDV 107 (562)
T ss_dssp --CCEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEEC
Confidence 34466777777766 4666553 56777777777776444466777777777777777766555666666666666666
Q ss_pred hhccccCCChhhhcccccchhhhcCCCccccCCCCccccCCCCCceecccCccccc-cCCccccCCCccceeeeeccccc
Q 043053 104 FDNALAGNIPAELGRLSNLEEMRAGGNKDIVGKIPAELGDCSNMTALGLADTQVSG-SLPASLGKLSKLQTLSIYTTMIS 182 (1058)
Q Consensus 104 ~~n~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~-~~~~~l~~l~~L~~L~l~~n~i~ 182 (1058)
++|.+. .+|.. .+++|++|++++|++.+ ..|..|+++++|++|++++|.+.
T Consensus 108 s~N~l~-~lp~~---------------------------~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~ 159 (562)
T 3a79_B 108 SHNRLQ-NISCC---------------------------PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFR 159 (562)
T ss_dssp TTSCCC-EECSC---------------------------CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCC
T ss_pred CCCcCC-ccCcc---------------------------ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccc
Confidence 666655 44433 34555555555555553 23456666666666666666665
Q ss_pred cccCccccCCCCc--cEEEccCCcC--CCCCCCCcCCCC-CcceeecccccccCCCCc-cccCcCCccEEEeecCCCc--
Q 043053 183 GEIPAEIGNCSEL--VSLFLYENSL--SGSIPPEIGKLK-KLEELFLWQNSLVGAIPE-EIGNCTSLKMIDFSLNSLS-- 254 (1058)
Q Consensus 183 ~~~~~~l~~l~~L--~~L~L~~n~l--~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~-~l~~l~~L~~L~L~~n~l~-- 254 (1058)
+. .+..+++| +.|++++|.+ ++..|..|..+. ..-.+++++|.+.+..+. .+..+++|+.|++++|...
T Consensus 160 ~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 236 (562)
T 3a79_B 160 QL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQ 236 (562)
T ss_dssp TT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHH
T ss_pred cC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccc
Confidence 42 23333333 6666666666 555555555543 111445666665544433 3456667777777766411
Q ss_pred --CcCCccccccCCcceeecccCccCCCcccc---ccccccchhhhhcCCcccCcCCCcc-----cccchhhhhhccCcc
Q 043053 255 --GTIPLSIGGLSELEEFMISDNNVSGSIPAN---LANATNLVQLQLDTNQISGLIPPEI-----GMLSKLTVFFAWQNQ 324 (1058)
Q Consensus 255 --~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~---~~~l~~L~~L~L~~N~i~~~~~~~~-----~~l~~L~~L~l~~N~ 324 (1058)
......+.++++|+.|+++++.+.+..... ....++|++|++++|++++..|..+ ..++.|+.+++..|.
T Consensus 237 ~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~ 316 (562)
T 3a79_B 237 RLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQV 316 (562)
T ss_dssp HHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECC
T ss_pred hHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccce
Confidence 011223556667777776666654321111 1123477778888887777667666 667777777777776
Q ss_pred cCCCCC-hhhhcc---CcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCC
Q 043053 325 LEGSIP-STLASC---SNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGL 400 (1058)
Q Consensus 325 l~~~~~-~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 400 (1058)
+ .+| ..+..+ .+|+.|++++|.+.... ....+++|++|++++|.+++..|..+.++++|+.|+|++|+++++
T Consensus 317 ~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 392 (562)
T 3a79_B 317 F--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNF 392 (562)
T ss_dssp C--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBT
T ss_pred e--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCc
Confidence 6 233 333332 67999999999987422 126789999999999999998999999999999999999999975
Q ss_pred c--cccccCccccceeeccCccCCC-CCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccc
Q 043053 401 I--PREIGGLKTLNFLDLSSNRLSG-SVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASL 477 (1058)
Q Consensus 401 ~--~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 477 (1058)
. |..|..+++|++|+|++|++++ ..+..+..+++|+.|++++|++++..|..+. ++|++|+|++|+|+ .+|..+
T Consensus 393 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~ 469 (562)
T 3a79_B 393 FKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDV 469 (562)
T ss_dssp THHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTT
T ss_pred ccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhh
Confidence 4 4679999999999999999998 4445688999999999999999876666554 79999999999998 677777
Q ss_pred cccccccccccccccCCCCCCCcccCCcccccccccCCcccCCCC
Q 043053 478 GRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVP 522 (1058)
Q Consensus 478 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 522 (1058)
..+++|+.|+|++|+|++..+..|..+++|+.|++++|++.+..|
T Consensus 470 ~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 470 THLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp TSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred cCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 799999999999999996444459999999999999999997655
No 42
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=9.2e-44 Score=430.37 Aligned_cols=458 Identities=20% Similarity=0.208 Sum_probs=296.3
Q ss_pred hhhhcCCCccccCCCCccccCCCCCceecccCccccccCCccccCCCccceeeeeccccccccCccccCCCCccEEEccC
Q 043053 123 EEMRAGGNKDIVGKIPAELGDCSNMTALGLADTQVSGSLPASLGKLSKLQTLSIYTTMISGEIPAEIGNCSELVSLFLYE 202 (1058)
Q Consensus 123 ~~L~l~~~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~ 202 (1058)
+++++++|. ...+|..+. ++|++|++++|.+.+..+..|+++++|++|++++|.+++..|..|.++++|++|+|++
T Consensus 34 ~~l~ls~~~--L~~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRN--LTHVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSC--CCSCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred cEEEcCCCC--CccCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 444555544 334554443 5566666666666655555666666666666666666655566666666666666666
Q ss_pred CcCCCCCCCCcCCCCCcceeecccccccCC-CCccccCcCCccEEEeecCCCcCcCCccccccCCc--ceeecccCcc--
Q 043053 203 NSLSGSIPPEIGKLKKLEELFLWQNSLVGA-IPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSEL--EEFMISDNNV-- 277 (1058)
Q Consensus 203 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~l~~n~l-- 277 (1058)
|.++ .+|.. .+++|++|+|++|++.+. .|..|+++++|++|++++|.+++. .+..+++| ++|++++|.+
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCC
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccc
Confidence 6666 44444 566666666666666542 245666666666666666666542 23344444 6666666666
Q ss_pred CCCccccccccc-cchhhhhcCCcccCcCCC-cccccchhhhhhccCcc-----cCCCCChhhhccCccccccccccccc
Q 043053 278 SGSIPANLANAT-NLVQLQLDTNQISGLIPP-EIGMLSKLTVFFAWQNQ-----LEGSIPSTLASCSNLQALDLSHNSLT 350 (1058)
Q Consensus 278 ~~~~~~~~~~l~-~L~~L~L~~N~i~~~~~~-~~~~l~~L~~L~l~~N~-----l~~~~~~~~~~l~~L~~L~Ls~N~l~ 350 (1058)
.+..|..+..+. ....+++++|.+.+..+. .+..+++|+.+++++|+ +.+ ....|..+++|+.|+++++.+.
T Consensus 184 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~ 262 (562)
T 3a79_B 184 KGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETT 262 (562)
T ss_dssp CSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEEC
T ss_pred cccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCc
Confidence 555555555543 111345666665543332 34556666666666663 111 1234666777777777777665
Q ss_pred ccCccc---ccccccchhhhccccCCCCCCCCCc-----cCCCCCcEEEccCccccCCccccccCc---cccceeeccCc
Q 043053 351 ASVPAG---LFQLQNLTKLLLISNDISGSIPPEI-----GNCSSLVRLRVGNNRIAGLIPREIGGL---KTLNFLDLSSN 419 (1058)
Q Consensus 351 ~~~~~~---~~~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~Ls~N 419 (1058)
+..... ....++|++|++++|.+++.+|..+ .+++.|+.++++.|.+ .+....+..+ .+|++|++++|
T Consensus 263 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~-~~p~~~~~~~~~~~~L~~L~l~~n 341 (562)
T 3a79_B 263 WKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF-LFSKEALYSVFAEMNIKMLSISDT 341 (562)
T ss_dssp HHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC-SSCHHHHHHHHHTCCCSEEEEESS
T ss_pred HHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee-ecChhhhhhhhccCcceEEEccCC
Confidence 321111 1123478888888888877777766 6666677777777766 2322333332 56888888888
Q ss_pred cCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccC--CcccccccccccccccccccCCCCC
Q 043053 420 RLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQ--IPASLGRLVSLNKIILSKNLFSGPI 497 (1058)
Q Consensus 420 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~ 497 (1058)
.+.... ....+++|+.|++++|++++..|..+.++++|++|+|++|++++. +|..|..+++|+.|+|++|++.+.+
T Consensus 342 ~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 419 (562)
T 3a79_B 342 PFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHA 419 (562)
T ss_dssp CCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCC
T ss_pred Cccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCcc
Confidence 775322 125677888888888888877777788888888888888888753 2456777888888888888887734
Q ss_pred C-CcccCCcccccccccCCcccCCCChhhhhhHHHHHHHhhccCCCCCCCCccccccccccEEecCCCcccCCCCc-ccc
Q 043053 498 P-SSLGLCSSLQLLDLSSNQLTGSVPMELGQIEALEIALNLSCNGLTGPIPAQISALNKLSILDLSHNKLEGNLNP-LAQ 575 (1058)
Q Consensus 498 ~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~ 575 (1058)
| ..+..+++|+.|++++|++++.+|..+. ..++ .|++++|+++. +|..+.++++|+.|||++|+|++.+.. +..
T Consensus 420 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~-~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~ 495 (562)
T 3a79_B 420 YDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVK-VLDLHNNRIMS-IPKDVTHLQALQELNVASNQLKSVPDGVFDR 495 (562)
T ss_dssp SSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCS-EEECCSSCCCC-CCTTTTSSCCCSEEECCSSCCCCCCTTSTTT
T ss_pred ChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCC-EEECCCCcCcc-cChhhcCCCCCCEEECCCCCCCCCCHHHHhc
Confidence 4 4577778888888888888776666553 2222 47788888874 555556999999999999999987766 889
Q ss_pred cCcceeEEEecccccccCCCccc
Q 043053 576 LDNLVSLNISYNKFTGYLPDNKL 598 (1058)
Q Consensus 576 l~~L~~L~l~~N~l~~~~~~~~~ 598 (1058)
+++|+.|++++|+|+|.||..+.
T Consensus 496 l~~L~~L~l~~N~~~c~c~~~~~ 518 (562)
T 3a79_B 496 LTSLQYIWLHDNPWDCTCPGIRY 518 (562)
T ss_dssp CTTCCCEECCSCCBCCCHHHHHH
T ss_pred CCCCCEEEecCCCcCCCcchHHH
Confidence 99999999999999999986544
No 43
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=8.8e-43 Score=416.37 Aligned_cols=256 Identities=23% Similarity=0.328 Sum_probs=209.5
Q ss_pred HHHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 701 QVLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 701 ~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
.++++|.+.+.||+|+||+||+| +..+|+.||||++... .....+.+.+|+++|+.++|||||+++++
T Consensus 154 ~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~-----------~~~~~~~~~~Ei~il~~l~hpnIv~l~~~ 222 (573)
T 3uto_A 154 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP-----------HESDKETVRKEIQTMSVLRHPTLVNLHDA 222 (573)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----------SHHHHHHHHHHHHHHHHTCCTTBCCEEEE
T ss_pred cCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc-----------chhhHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 34678999999999999999999 6678999999998432 22345788999999999999999999999
Q ss_pred EEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCC--CCeee
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLE--FEPYI 857 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~--~~~kl 857 (1058)
|.+++..|+|||||+||+|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+||
T Consensus 223 ~~~~~~~~iv~E~~~gg~L~~~i~~~-~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl 298 (573)
T 3uto_A 223 FEDDNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKL 298 (573)
T ss_dssp EECSSEEEEEEECCCCCBHHHHHTCT-TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEE
T ss_pred EEECCEEEEEEeecCCCcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEE
Confidence 99999999999999999999999753 46799999999999999999999999 99999999999999864 89999
Q ss_pred eccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcC
Q 043053 858 ADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKG 937 (1058)
Q Consensus 858 ~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 937 (1058)
+|||+|+...... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||.... .......+...
T Consensus 299 ~DFG~a~~~~~~~---~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~--~~~~~~~i~~~-- 371 (573)
T 3uto_A 299 IDFGLTAHLDPKQ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN--DDETLRNVKSC-- 371 (573)
T ss_dssp CCCSSCEECCTTS---EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS--HHHHHHHHHTT--
T ss_pred eeccceeEccCCC---ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHHhC--
Confidence 9999999876543 3345689999999999999999999999999999999999999997542 12222222211
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 938 IQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
...+.+......+. .+.+++.+||+.||++|||++|++++-
T Consensus 372 ~~~~~~~~~~~~s~------~~~dli~~~L~~dp~~R~t~~e~l~Hp 412 (573)
T 3uto_A 372 DWNMDDSAFSGISE------DGKDFIRKLLLADPNTRMTIHQALEHP 412 (573)
T ss_dssp CCCCCSGGGTTSCH------HHHHHHHTTSCSSGGGSCCHHHHHHST
T ss_pred CCCCCcccccCCCH------HHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 11111222222222 234578899999999999999999853
No 44
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=6e-41 Score=375.68 Aligned_cols=274 Identities=36% Similarity=0.605 Sum_probs=221.4
Q ss_pred HHHhhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEE
Q 043053 701 QVLKCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCC 780 (1058)
Q Consensus 701 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 780 (1058)
...++|...+.||+|+||.||+|...+++.||||++... .....+.+.+|++++++++||||+++++++
T Consensus 36 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-----------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 104 (321)
T 2qkw_B 36 EATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE-----------SSQGIEEFETEIETLSFCRHPHLVSLIGFC 104 (321)
T ss_dssp CCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC-----------CSSHHHHHHHHHHGGGSCCCTTBCCEEEEC
T ss_pred HHHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc-----------ChHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 345789999999999999999998888999999987432 233467899999999999999999999999
Q ss_pred EcCCCceEEEEecCCCChhhhhhhcC--CCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeee
Q 043053 781 WNRNNRLLMYDYMPNGSLGSLLHERT--GNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIA 858 (1058)
Q Consensus 781 ~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~ 858 (1058)
.+++..++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 105 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~ 181 (321)
T 2qkw_B 105 DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKIT 181 (321)
T ss_dssp CCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEEC
T ss_pred cCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEe
Confidence 99999999999999999999997643 23589999999999999999999999 99999999999999999999999
Q ss_pred ccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCC-hhHHHHHHhhc-
Q 043053 859 DFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDG-SHVVDWVRQKK- 936 (1058)
Q Consensus 859 DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~-~~~~~~~~~~~- 936 (1058)
|||+++...............||+.|+|||++.+..++.++||||||+++|||++|+.||....+.. .....|.....
T Consensus 182 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~ 261 (321)
T 2qkw_B 182 DFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN 261 (321)
T ss_dssp CCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHT
T ss_pred ecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccc
Confidence 9999987654333333445668999999999988899999999999999999999999997654432 23333332211
Q ss_pred ---CccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 937 ---GIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 937 ---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
.....++........ .....+.+++.+||+.||++|||++|++++|+.+...
T Consensus 262 ~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 262 NGQLEQIVDPNLADKIRP--ESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp TTCCCSSSSSSCTTCSCH--HHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred cccHHHhcChhhccccCH--HHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 112223333222222 2333455689999999999999999999999887543
No 45
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.3e-40 Score=379.59 Aligned_cols=261 Identities=26% Similarity=0.399 Sum_probs=212.9
Q ss_pred hhccccceeccccceEEEEEEe--------cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCccc
Q 043053 704 KCLVDANVIGKGCSGVVYRADM--------DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIV 774 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 774 (1058)
++|.+.+.||+|+||.||+|.. .++..||||++... ......+.+.+|+++++++ +||||+
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~~E~~~l~~l~~hpnIv 150 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD----------ATEKDLSDLVSEMEMMKMIGKHKNII 150 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT----------CBHHHHHHHHHHHHHHHHSCCCTTBC
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC----------cCHHHHHHHHHHHHHHHHhcCCCCEe
Confidence 6899999999999999999954 24567999998533 2334467899999999999 899999
Q ss_pred ceeeEEEcCCCceEEEEecCCCChhhhhhhcC--------------CCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeC
Q 043053 775 RFLGCCWNRNNRLLMYDYMPNGSLGSLLHERT--------------GNALEWELRYQILLGAAQGLAYLHHDCVPPIVHR 840 (1058)
Q Consensus 775 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHr 840 (1058)
++++++.+++..|+||||+++|+|.++++... ...+++..++.++.||++||+|||+. +|+||
T Consensus 151 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHr 227 (370)
T 2psq_A 151 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHR 227 (370)
T ss_dssp CEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred eEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceecc
Confidence 99999999999999999999999999998643 23588999999999999999999999 99999
Q ss_pred CCCCCcEEEcCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCC
Q 043053 841 DIKANNILIGLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPID 919 (1058)
Q Consensus 841 Dikp~Nill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~ 919 (1058)
||||+|||++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 228 Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~ 307 (370)
T 2psq_A 228 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 307 (370)
T ss_dssp CCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred ccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 9999999999999999999999997765544344455668899999999999999999999999999999999 999997
Q ss_pred CCCCCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 920 PTIPDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
... .......+.... .+......+. + +..++..||+.||++|||+.|+++.|+++...
T Consensus 308 ~~~--~~~~~~~~~~~~-----~~~~~~~~~~---~---l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 308 GIP--VEELFKLLKEGH-----RMDKPANCTN---E---LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp TCC--GGGHHHHHHTTC-----CCCCCTTSCH---H---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCC--HHHHHHHHhcCC-----CCCCCCCCCH---H---HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 542 223333222221 1111112222 2 33477889999999999999999999987653
No 46
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.6e-40 Score=369.30 Aligned_cols=260 Identities=30% Similarity=0.437 Sum_probs=200.9
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
.+|.+.+.||+|+||+||+|.. +|+.||||++.... ......+++.+|++++++++||||+++++++.+.
T Consensus 37 ~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 106 (309)
T 3p86_A 37 CDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQD---------FHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP 106 (309)
T ss_dssp GGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCC---------CSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred hHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCC---------CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence 6889999999999999999976 48999999985331 2334457899999999999999999999999999
Q ss_pred CCceEEEEecCCCChhhhhhhcC-CCCCCHHHHHHHHHHHHHHhhcccccCCCC--eEeCCCCCCcEEEcCCCCeeeecc
Q 043053 784 NNRLLMYDYMPNGSLGSLLHERT-GNALEWELRYQILLGAAQGLAYLHHDCVPP--IVHRDIKANNILIGLEFEPYIADF 860 (1058)
Q Consensus 784 ~~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivHrDikp~Nill~~~~~~kl~Df 860 (1058)
+..++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+. + |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Df 183 (309)
T 3p86_A 107 PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDF 183 (309)
T ss_dssp TCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCC
T ss_pred CceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCC
Confidence 99999999999999999997632 12489999999999999999999999 7 999999999999999999999999
Q ss_pred ccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccc
Q 043053 861 GLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQV 940 (1058)
Q Consensus 861 Gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1058)
|+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....+ ......+.....
T Consensus 184 g~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~--~~~~~~~~~~~~--- 256 (309)
T 3p86_A 184 GLSRLKASTF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP--AQVVAAVGFKCK--- 256 (309)
T ss_dssp C-------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH--HHHHHHHHHSCC---
T ss_pred CCCccccccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhcCC---
Confidence 9998654322 223456799999999999999999999999999999999999999975422 222222211111
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 941 LDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
........+.. +..++.+||+.||++|||++++++.|+.+...
T Consensus 257 -~~~~~~~~~~~------l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 257 -RLEIPRNLNPQ------VAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp -CCCCCTTSCHH------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred -CCCCCccCCHH------HHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 11112222222 33477889999999999999999999887654
No 47
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=8.8e-41 Score=374.11 Aligned_cols=269 Identities=26% Similarity=0.331 Sum_probs=208.2
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
++|.+.++||+|+||+||+|... ++.||||++... ......+.+|+.++++++||||+++++++...
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~------------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 90 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ------------DKQSWQNEYEVYSLPGMKHENILQFIGAEKRG 90 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG------------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecC------------chHHHHHHHHHHHHhcCCCCCchhhcceeccC
Confidence 57899999999999999999776 899999998432 22345667799999999999999999999875
Q ss_pred CC----ceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhccccc-------CCCCeEeCCCCCCcEEEcCC
Q 043053 784 NN----RLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHD-------CVPPIVHRDIKANNILIGLE 852 (1058)
Q Consensus 784 ~~----~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-------~~~~ivHrDikp~Nill~~~ 852 (1058)
.. .++||||+++|+|.++++. ..+++..++.++.|+++||+|||+. +.++|+||||||+||+++.+
T Consensus 91 ~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~ 167 (322)
T 3soc_A 91 TSVDVDLWLITAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNN 167 (322)
T ss_dssp CSSSEEEEEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTT
T ss_pred CCCCceEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCC
Confidence 54 5999999999999999976 3589999999999999999999985 12389999999999999999
Q ss_pred CCeeeeccccceeccCCCcccccccccCcCCccCcccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCh-
Q 043053 853 FEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYM-----MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGS- 926 (1058)
Q Consensus 853 ~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~- 926 (1058)
+.+||+|||+++...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||........
T Consensus 168 ~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~ 247 (322)
T 3soc_A 168 LTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYML 247 (322)
T ss_dssp CCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCC
T ss_pred CeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhcc
Confidence 9999999999988765544344455679999999999876 3456788999999999999999999976433211
Q ss_pred ----------hHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 927 ----------HVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 927 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
....+.... ......+...... ........+.+++.+||+.||++|||++++++.|+++...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 248 PFEEEIGQHPSLEDMQEVV-VHKKKRPVLRDYW-QKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp TTHHHHCSSCCHHHHHHHH-TTSCCCCCCCGGG-GSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred chhhhhccCCchhhhhhhh-hcccCCCCccccc-cccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 111111111 1111111111111 1112223355689999999999999999999999988753
No 48
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.2e-40 Score=368.44 Aligned_cols=251 Identities=22% Similarity=0.377 Sum_probs=204.4
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.++|...+.||+|+||+||+| +..+++.||||++... .....+.+.+|+.++++++||||+++++++.
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----------~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 87 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ-----------QQPKKELIINEILVMRENKNPNIVNYLDSYL 87 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGG-----------GCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecc-----------cccHHHHHHHHHHHHhcCCCCCCCeEeEEEE
Confidence 468999999999999999999 4578999999998533 2223577899999999999999999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccc
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFG 861 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfG 861 (1058)
.++..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 88 ~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg 161 (297)
T 3fxz_A 88 VGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG 161 (297)
T ss_dssp ETTEEEEEEECCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCT
T ss_pred ECCEEEEEEECCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCC
Confidence 99999999999999999999986 3589999999999999999999999 99999999999999999999999999
Q ss_pred cceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcccc
Q 043053 862 LAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVL 941 (1058)
Q Consensus 862 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1058)
++....... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....+ ......+.......
T Consensus 162 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~~~~~~~~~-- 235 (297)
T 3fxz_A 162 FCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP--LRALYLIATNGTPE-- 235 (297)
T ss_dssp TCEECCSTT--CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHHCSCC--
T ss_pred CceecCCcc--cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCCCC--
Confidence 998765433 233456799999999999999999999999999999999999999975422 11111111111111
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 942 DPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
.......+. .+.+++.+||+.||++|||++|++++
T Consensus 236 -~~~~~~~~~------~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 236 -LQNPEKLSA------IFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp -CSCGGGSCH------HHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -CCCccccCH------HHHHHHHHHccCChhHCcCHHHHhhC
Confidence 111111111 23347888999999999999999875
No 49
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=8.2e-41 Score=374.06 Aligned_cols=256 Identities=26% Similarity=0.361 Sum_probs=205.6
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.++|.+.+.||+|+||+||+| +..+++.||||++.... .....+.+.+|+.+++.++||||+++++++.
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~ 75 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR----------AVDCPENIKKEICINKMLNHENVVKFYGHRR 75 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----------------CHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccc----------ccchHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence 468999999999999999999 45589999999984331 1223467889999999999999999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccc
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFG 861 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfG 861 (1058)
+++..|+||||+++|+|.+++.. ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg 150 (323)
T 3tki_A 76 EGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFG 150 (323)
T ss_dssp CSSEEEEEEECCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred cCCeEEEEEEcCCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEee
Confidence 99999999999999999999975 35699999999999999999999999 99999999999999999999999999
Q ss_pred cceeccCCCcccccccccCcCCccCccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccc
Q 043053 862 LAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKI-TEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQV 940 (1058)
Q Consensus 862 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1058)
+++...............||+.|+|||++.+..+ +.++||||+||++|||++|+.||............+......
T Consensus 151 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--- 227 (323)
T 3tki_A 151 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY--- 227 (323)
T ss_dssp TCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTT---
T ss_pred ccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccccc---
Confidence 9987654433334456789999999999887765 778999999999999999999998664444444333322111
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 941 LDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
..+ ....+. .+.+++.+||+.||++|||++|++++-
T Consensus 228 ~~~--~~~~~~------~~~~li~~~L~~dP~~R~t~~eil~h~ 263 (323)
T 3tki_A 228 LNP--WKKIDS------APLALLHKILVENPSARITIPDIKKDR 263 (323)
T ss_dssp STT--GGGSCH------HHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred CCc--cccCCH------HHHHHHHHHccCChhhCcCHHHHhhCh
Confidence 110 111111 223578889999999999999998753
No 50
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.2e-40 Score=374.12 Aligned_cols=273 Identities=41% Similarity=0.692 Sum_probs=218.3
Q ss_pred HHhhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 702 VLKCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 702 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
..++|...+.||+|+||.||+|...+|+.||||++.... .......+.+|++++++++||||+++++++.
T Consensus 28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 28 ASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEER----------TQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp TTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC---------------CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred HhhccccceeEecCCCcEEEEEEecCCCEEEEEEecccc----------CchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 347899999999999999999987789999999985432 1122346899999999999999999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhcC--CCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeec
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERT--GNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIAD 859 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~D 859 (1058)
.++..++||||+++|+|.++++... ...+++..+..|+.|++.||+|||+.+.++|+||||||+||+++.++.+||+|
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 177 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 177 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECC
T ss_pred cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEecc
Confidence 9999999999999999999998643 34599999999999999999999998777999999999999999999999999
Q ss_pred cccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCC---CCCChhHHHHHHhhc
Q 043053 860 FGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPT---IPDGSHVVDWVRQKK 936 (1058)
Q Consensus 860 fGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~---~~~~~~~~~~~~~~~ 936 (1058)
||+++....... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||+.. .........|.....
T Consensus 178 fg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (326)
T 3uim_A 178 FGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256 (326)
T ss_dssp CSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred CccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence 999987654332 2334556999999999998888999999999999999999999999621 122334444544332
Q ss_pred Cccc----cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhh
Q 043053 937 GIQV----LDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEI 987 (1058)
Q Consensus 937 ~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~ 987 (1058)
.... .+....... .......+.+++..||+.||++|||+++++++|+..
T Consensus 257 ~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 257 KEKKLEALVDVDLQGNY--KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp SSCCSTTSSCTTCTTSC--CHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred hchhhhhhcChhhcccc--CHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 2211 122222111 223344556689999999999999999999999864
No 51
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.7e-41 Score=378.77 Aligned_cols=257 Identities=22% Similarity=0.294 Sum_probs=199.3
Q ss_pred HHHHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceee
Q 043053 700 EQVLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLG 778 (1058)
Q Consensus 700 ~~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~ 778 (1058)
+++.++|.+.+.||+|+||+||+| +..+|+.||||++.... .....+.+.+|++++++++||||+++++
T Consensus 6 ~~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~----------~~~~~~~~~~Ei~~l~~l~hpnIv~l~~ 75 (347)
T 3zgw_A 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNT----------LGSDLPRIKTEIEALKNLRHQHICQLYH 75 (347)
T ss_dssp TTTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSC----------C---CCHHHHHHHHHHTCCCTTBCCEEE
T ss_pred HHHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccc----------cchHHHHHHHHHHHHHhCCCCCEeeEEE
Confidence 455688999999999999999999 55789999999985432 1122467899999999999999999999
Q ss_pred EEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeee
Q 043053 779 CCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIA 858 (1058)
Q Consensus 779 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~ 858 (1058)
++.+.+..++||||+++|+|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 76 ~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~ 150 (347)
T 3zgw_A 76 VLETANKIFMVLEYCPGGELFDYIISQ--DRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLI 150 (347)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred EEEeCCEEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEE
Confidence 999999999999999999999999764 5689999999999999999999999 99999999999999999999999
Q ss_pred ccccceeccCCCcccccccccCcCCccCccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcC
Q 043053 859 DFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKI-TEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKG 937 (1058)
Q Consensus 859 DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 937 (1058)
|||++........ ......+||+.|+|||++.+..+ +.++||||+||++|||++|..||.... .......+....
T Consensus 151 DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~--~~~~~~~i~~~~- 226 (347)
T 3zgw_A 151 DFGLCAKPKGNKD-YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN--VMALYKKIMRGK- 226 (347)
T ss_dssp CCTTCBC---------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHTC-
T ss_pred eccCcccccCCCC-ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHHcCC-
Confidence 9999876543321 23345679999999999988775 889999999999999999999997531 122222221111
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 043053 938 IQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKE 986 (1058)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~ 986 (1058)
.......+.. +.+++.+||+.||++|||++|++++-..
T Consensus 227 -----~~~p~~~s~~------~~~li~~~L~~dP~~Rps~~eil~hp~~ 264 (347)
T 3zgw_A 227 -----YDVPKWLSPS------SILLLQQMLQVDPKKRISMKNLLNHPWI 264 (347)
T ss_dssp -----CCCCTTCCHH------HHHHHHHHTCSSGGGSCCHHHHHTCHHH
T ss_pred -----CCCCCCCCHH------HHHHHHHHcccCHhHCcCHHHHhcCcch
Confidence 1111112222 3347888999999999999999986544
No 52
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=369.64 Aligned_cols=259 Identities=25% Similarity=0.476 Sum_probs=210.7
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|...+.||+|+||+||+| +..+++.||+|++.. ......+.+.+|++++++++||||+++++++.+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~-----------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 78 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR-----------FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK 78 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC-----------CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc-----------CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEec
Confidence 57899999999999999999 556799999998742 234456889999999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
++..++||||+++|+|.++++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 154 (310)
T 3s95_A 79 DKRLNFITEYIKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGL 154 (310)
T ss_dssp TTEEEEEEECCTTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTT
T ss_pred CCeeEEEEEecCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeeccc
Confidence 99999999999999999999874 46799999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCccc------------ccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCh----
Q 043053 863 AKLVDDGDFAR------------SSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGS---- 926 (1058)
Q Consensus 863 ~~~~~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~---- 926 (1058)
++......... ......||+.|+|||++.+..++.++||||||+++|||++|..||....+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~ 234 (310)
T 3s95_A 155 ARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL 234 (310)
T ss_dssp CEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSB
T ss_pred ceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhh
Confidence 98765432111 11245799999999999999999999999999999999999999875433211
Q ss_pred hHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043053 927 HVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHERE 992 (1058)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~~ 992 (1058)
........ ......+.. +..++.+||+.||++|||++++++.|+.+.....
T Consensus 235 ~~~~~~~~---------~~~~~~~~~------l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 235 NVRGFLDR---------YCPPNCPPS------FFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp CHHHHHHH---------TCCTTCCTT------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred hhhccccc---------cCCCCCCHH------HHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 11111111 111122222 3347778999999999999999999998876543
No 53
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.7e-40 Score=391.37 Aligned_cols=373 Identities=21% Similarity=0.196 Sum_probs=292.1
Q ss_pred cCCCCccccCCCCCceecccCccccccCCccccCCCccceeeeecccccccc-CccccCCCCccEEEccCCcCCCCCCCC
Q 043053 134 VGKIPAELGDCSNMTALGLADTQVSGSLPASLGKLSKLQTLSIYTTMISGEI-PAEIGNCSELVSLFLYENSLSGSIPPE 212 (1058)
Q Consensus 134 ~~~l~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~-~~~l~~l~~L~~L~L~~n~l~~~~~~~ 212 (1058)
...+|. + .++|++|++++|.+.+..|..|+++++|++|++++|.+.+.+ +..|.++++|++|+|++|.+++..|..
T Consensus 22 l~~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 98 (455)
T 3v47_A 22 LHQVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGA 98 (455)
T ss_dssp CSSCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTT
T ss_pred cccCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhh
Confidence 445555 2 267888888888888777888888888888888888876554 566888888888888888888777888
Q ss_pred cCCCCCcceeecccccccCCCCcc--ccCcCCccEEEeecCCCcCcCCcc-ccccCCcceeecccCccCCCcccccccc-
Q 043053 213 IGKLKKLEELFLWQNSLVGAIPEE--IGNCTSLKMIDFSLNSLSGTIPLS-IGGLSELEEFMISDNNVSGSIPANLANA- 288 (1058)
Q Consensus 213 ~~~l~~L~~L~L~~n~l~~~~~~~--l~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l- 288 (1058)
|+++++|++|+|++|.+.+..+.. |..+++|++|+|++|.+++..|.. +.++++|++|++++|.+.+..+..+..+
T Consensus 99 ~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~ 178 (455)
T 3v47_A 99 FNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQ 178 (455)
T ss_dssp TTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGT
T ss_pred ccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccc
Confidence 888888888888888887644443 788888888888888888776765 7788888888888888887777777766
Q ss_pred -ccchhhhhcCCcccCcCCCccc--------ccchhhhhhccCcccCCCCChhhhcc---CcccccccccccccccCccc
Q 043053 289 -TNLVQLQLDTNQISGLIPPEIG--------MLSKLTVFFAWQNQLEGSIPSTLASC---SNLQALDLSHNSLTASVPAG 356 (1058)
Q Consensus 289 -~~L~~L~L~~N~i~~~~~~~~~--------~l~~L~~L~l~~N~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~~~~ 356 (1058)
.+|+.|++++|.+.+..+..++ .+++|++|++++|++++..+..+..+ .+|+.|++++|.+.+..
T Consensus 179 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~--- 255 (455)
T 3v47_A 179 GKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS--- 255 (455)
T ss_dssp TCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC---
T ss_pred cccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccc---
Confidence 6788888888888766554432 33455555555555554444444333 45555555555443211
Q ss_pred ccccccchhhhccccCCCCCCCCCccC--CCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcc
Q 043053 357 LFQLQNLTKLLLISNDISGSIPPEIGN--CSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTE 434 (1058)
Q Consensus 357 ~~~l~~L~~L~L~~N~l~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 434 (1058)
+..+.+....+..+.. .++|+.|++++|++++..|..|..+++|++|+|++|++++..|..|..+++
T Consensus 256 -----------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 324 (455)
T 3v47_A 256 -----------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTH 324 (455)
T ss_dssp -----------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred -----------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCccc
Confidence 1112222233333433 368999999999999999999999999999999999999999999999999
Q ss_pred cchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccC
Q 043053 435 LQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSS 514 (1058)
Q Consensus 435 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~ 514 (1058)
|+.|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|+.|++++
T Consensus 325 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 404 (455)
T 3v47_A 325 LLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHT 404 (455)
T ss_dssp CCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccC
Confidence 99999999999988899999999999999999999988899999999999999999999988888889999999999999
Q ss_pred CcccCCCCh
Q 043053 515 NQLTGSVPM 523 (1058)
Q Consensus 515 N~l~~~~p~ 523 (1058)
|++++..|.
T Consensus 405 N~l~~~~~~ 413 (455)
T 3v47_A 405 NPWDCSCPR 413 (455)
T ss_dssp SCBCCCTTT
T ss_pred CCcccCCCc
Confidence 999988873
No 54
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.4e-40 Score=388.74 Aligned_cols=362 Identities=22% Similarity=0.236 Sum_probs=167.0
Q ss_pred CCCcccEEecCCCCCCCCCChhhcCcccCCEEeccccCCCCccccccccchhhhHHhhhhccccCCChhhhcccccchhh
Q 043053 46 DCVGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNSNQLTGKIPVELSNCKSLRKLLLFDNALAGNIPAELGRLSNLEEM 125 (1058)
Q Consensus 46 ~l~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L 125 (1058)
..++|++|++++|.+ +.+|.++++|++|++|+|++|++.+.+|..++++++|+.+++.+|.. .++++|
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L 76 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHEL 76 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEE
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEE
Confidence 346667777777776 46777777777777777777766666777777777777776666642 345566
Q ss_pred hcCCCccccCCCCccccCCCCCceecccCccccccCCccccCCCccceeeeeccccccccCccccCCCCccEEEccCCcC
Q 043053 126 RAGGNKDIVGKIPAELGDCSNMTALGLADTQVSGSLPASLGKLSKLQTLSIYTTMISGEIPAEIGNCSELVSLFLYENSL 205 (1058)
Q Consensus 126 ~l~~~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l 205 (1058)
++++|. ...+|.. .++|++|++++|.+.+ +|.. +++|+.|++++|.+++ ++.. .++|++|++++|.+
T Consensus 77 ~l~~~~--l~~lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l 143 (454)
T 1jl5_A 77 ELNNLG--LSSLPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQL 143 (454)
T ss_dssp ECTTSC--CSCCCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCC
T ss_pred EecCCc--cccCCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCC
Confidence 666665 3444432 2456666666666553 4432 2455566666655542 2211 14556666666655
Q ss_pred CCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCcCCccccccCCcceeecccCccCCCccccc
Q 043053 206 SGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANL 285 (1058)
Q Consensus 206 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 285 (1058)
++ +| .|+.+++|++|++++|++.+ +|..+ ++|++|++++|++++ +| .++++++|++|++++|.+++ +|..
T Consensus 144 ~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~- 213 (454)
T 1jl5_A 144 EK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL- 213 (454)
T ss_dssp SS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC-
T ss_pred CC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC-
Confidence 53 44 35555666666666665553 33322 355555555555554 33 35555555555555555553 2221
Q ss_pred cccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchh
Q 043053 286 ANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTK 365 (1058)
Q Consensus 286 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 365 (1058)
.++|++|++++|+++.+ | .|+.+++|++|++++|++++ +|.. .++|++
T Consensus 214 --~~~L~~L~l~~n~l~~l-p-~~~~l~~L~~L~l~~N~l~~-------------------------l~~~---~~~L~~ 261 (454)
T 1jl5_A 214 --PLSLESIVAGNNILEEL-P-ELQNLPFLTTIYADNNLLKT-------------------------LPDL---PPSLEA 261 (454)
T ss_dssp --CTTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSS-------------------------CCSC---CTTCCE
T ss_pred --cCcccEEECcCCcCCcc-c-ccCCCCCCCEEECCCCcCCc-------------------------cccc---ccccCE
Confidence 13455555555555422 2 24444444444444444443 2221 134444
Q ss_pred hhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCC-cccchhhccCCc
Q 043053 366 LLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDC-TELQMIDLSHNT 444 (1058)
Q Consensus 366 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~l~~N~ 444 (1058)
|++++|++++ +|.. +++|+.|++++|+++++. . -.++|++|++++|++++. + .+ ++|+.|++++|+
T Consensus 262 L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~-~---~~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~ 328 (454)
T 1jl5_A 262 LNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLS-E---LPPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNK 328 (454)
T ss_dssp EECCSSCCSC-CCCC---CTTCCEEECCSSCCSEES-C---CCTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSC
T ss_pred EECCCCcccc-cCcc---cCcCCEEECcCCccCccc-C---cCCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCc
Confidence 4444444443 2221 244555555555554321 0 013455555555555421 1 11 245555555555
Q ss_pred cCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCC
Q 043053 445 LQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSG 495 (1058)
Q Consensus 445 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 495 (1058)
+++ +|.. +++|++|++++|+++ .+|. .+++|+.|+|++|++++
T Consensus 329 l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 329 LIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp CSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSS
T ss_pred ccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCc
Confidence 553 2322 344555555555554 2333 23455555555555554
No 55
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.2e-40 Score=389.38 Aligned_cols=283 Identities=23% Similarity=0.254 Sum_probs=201.4
Q ss_pred CCCCCcEEEccCCcCCCCCCCCCCCCCcccEEecCCCCCCCCCChhhcCcccCCEEeccccCCCCccccccccchhhhHH
Q 043053 22 SFKHLQTLVISDANLTGSIPFDIGDCVGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNSNQLTGKIPVELSNCKSLRKL 101 (1058)
Q Consensus 22 ~~~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L 101 (1058)
+..+|++|++++|.+ |.+|.+++++++|++|++++|++++.+|.+++++.+|+.+++++|.. .+|++|
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L 76 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHEL 76 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEE
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEE
Confidence 468999999999999 69999999999999999999999999999999999997777777742 456777
Q ss_pred hhhhccccCCChhhhcccccchhhhcCCCccccCCCCccccCCCCCceecccCccccccCCccccCCCccceeeeecccc
Q 043053 102 LLFDNALAGNIPAELGRLSNLEEMRAGGNKDIVGKIPAELGDCSNMTALGLADTQVSGSLPASLGKLSKLQTLSIYTTMI 181 (1058)
Q Consensus 102 ~L~~n~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~i 181 (1058)
++++|.+. .+|.. .++|++|++++|. ...+|.. +++|++|++++|++.+ ++.. .++|++|++++|.+
T Consensus 77 ~l~~~~l~-~lp~~---~~~L~~L~l~~n~--l~~lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l 143 (454)
T 1jl5_A 77 ELNNLGLS-SLPEL---PPHLESLVASCNS--LTELPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQL 143 (454)
T ss_dssp ECTTSCCS-CCCSC---CTTCSEEECCSSC--CSSCCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCC
T ss_pred EecCCccc-cCCCC---cCCCCEEEccCCc--CCccccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCC
Confidence 77777776 45542 3577888888776 4456653 3789999999998873 3322 16899999999999
Q ss_pred ccccCccccCCCCccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCcCCccc
Q 043053 182 SGEIPAEIGNCSELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSI 261 (1058)
Q Consensus 182 ~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~ 261 (1058)
++ +| .++++++|++|++++|.+++ +|..+ .+|++|++++|.+.+ +| .++.+++|++|++++|++++ +|..
T Consensus 144 ~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~- 213 (454)
T 1jl5_A 144 EK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL- 213 (454)
T ss_dssp SS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC-
T ss_pred CC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC-
Confidence 85 77 69999999999999999985 66544 589999999999996 55 69999999999999999986 4432
Q ss_pred cccCCcceeecccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccc
Q 043053 262 GGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQA 341 (1058)
Q Consensus 262 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 341 (1058)
.++|++|++++|.+. .+| .+..+++|++|++++|+++++ |.. +++|+.|++++|++++. |.. .++|+.
T Consensus 214 --~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l-~~~---~~~L~~L~l~~N~l~~l-~~~---~~~L~~ 281 (454)
T 1jl5_A 214 --PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTL-PDL---PPSLEALNVRDNYLTDL-PEL---PQSLTF 281 (454)
T ss_dssp --CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSC-CSC---CTTCCEEECCSSCCSCC-CCC---CTTCCE
T ss_pred --cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCcc-ccc---ccccCEEECCCCccccc-Ccc---cCcCCE
Confidence 258999999999998 556 489999999999999999874 322 35666666666666652 222 255666
Q ss_pred cccccccccc
Q 043053 342 LDLSHNSLTA 351 (1058)
Q Consensus 342 L~Ls~N~l~~ 351 (1058)
|++++|++++
T Consensus 282 L~ls~N~l~~ 291 (454)
T 1jl5_A 282 LDVSENIFSG 291 (454)
T ss_dssp EECCSSCCSE
T ss_pred EECcCCccCc
Confidence 6666666654
No 56
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.2e-40 Score=381.15 Aligned_cols=260 Identities=24% Similarity=0.398 Sum_probs=210.2
Q ss_pred hhccccceeccccceEEEEEEec-CCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRADMD-NGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|...+.||+|+||.||+|... +++.||||++... ......++|.+|++++++++||||+++++++..
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 183 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET----------LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ 183 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT----------SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc----------CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec
Confidence 57899999999999999999654 7999999998532 123345678899999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
++..++||||+++|+|.++++.. +..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 184 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~ 259 (377)
T 3cbl_A 184 KQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGM 259 (377)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred CCCcEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCC
Confidence 99999999999999999999864 35689999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcCcccc
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKGIQVL 941 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1058)
++...............+++.|+|||++.+..++.++|||||||++|||++ |..||.... .......+.....
T Consensus 260 s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~--~~~~~~~~~~~~~---- 333 (377)
T 3cbl_A 260 SREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS--NQQTREFVEKGGR---- 333 (377)
T ss_dssp CEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC--HHHHHHHHHTTCC----
T ss_pred ceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCCC----
Confidence 987554332222223346788999999988889999999999999999998 999997542 2233333322211
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 942 DPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
.......+. + +.+++..||+.||++|||++++++.|+++..+
T Consensus 334 -~~~~~~~~~---~---l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 334 -LPCPELCPD---A---VFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp -CCCCTTCCH---H---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCCCCCCH---H---HHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 111111222 2 33478889999999999999999999988653
No 57
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=9.9e-41 Score=375.35 Aligned_cols=262 Identities=16% Similarity=0.164 Sum_probs=208.3
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccceeeEEE
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVRFLGCCW 781 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 781 (1058)
++|.+.+.||+|+||+||+| +..+|+.||||++... ...+.+.+|+++++++ +||||+++++++.
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------------~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 75 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMK-------------SRAPQLHLEYRFYKQLGSGDGIPQVYYFGP 75 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETT-------------CSSCCHHHHHHHHHHHCSCTTSCCEEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccc-------------cchHHHHHHHHHHHHhhCCCCCCEEEEEEe
Confidence 57899999999999999999 4578999999987422 1124578999999999 8999999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCC-----ee
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFE-----PY 856 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~-----~k 856 (1058)
.++..++||||+ +|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++. +|
T Consensus 76 ~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~k 150 (330)
T 2izr_A 76 CGKYNAMVLELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIH 150 (330)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEE
T ss_pred cCCccEEEEEeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEE
Confidence 999999999999 99999999864 46799999999999999999999999 9999999999999998887 99
Q ss_pred eeccccceeccCCCcc-----cccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCh-hHHH
Q 043053 857 IADFGLAKLVDDGDFA-----RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGS-HVVD 930 (1058)
Q Consensus 857 l~DfGl~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~-~~~~ 930 (1058)
|+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ....
T Consensus 151 l~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~ 230 (330)
T 2izr_A 151 IIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQ 230 (330)
T ss_dssp ECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHH
T ss_pred EEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHH
Confidence 9999999876543321 123466799999999999999999999999999999999999999986543322 1111
Q ss_pred HHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043053 931 WVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHER 991 (1058)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~ 991 (1058)
.+..... ........... . .+..++..||+.||.+||+++++.+.++++....
T Consensus 231 ~i~~~~~-~~~~~~~~~~~----p---~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 231 KIGDTKR-ATPIEVLCENF----P---EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp HHHHHHH-HSCHHHHTTTC----H---HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHhhhc-cCCHHHHhccC----h---HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 1111110 00000001111 1 3445788899999999999999999998876543
No 58
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.9e-40 Score=359.01 Aligned_cols=258 Identities=27% Similarity=0.435 Sum_probs=210.3
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
++|.+.+.||+|+||.||+|...++..||||++... ....+++.+|++++++++||||+++++++.++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~------------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 75 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEG------------SMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE 75 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBT------------TBCHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccC------------CCcHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 678999999999999999998888889999998532 22346789999999999999999999999999
Q ss_pred CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccccc
Q 043053 784 NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLA 863 (1058)
Q Consensus 784 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~ 863 (1058)
...++||||+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~ 151 (268)
T 3sxs_A 76 YPIYIVTEYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMT 151 (268)
T ss_dssp SSEEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCE
T ss_pred CceEEEEEccCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccc
Confidence 9999999999999999999864 35689999999999999999999999 9999999999999999999999999999
Q ss_pred eeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcCccccC
Q 043053 864 KLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKGIQVLD 942 (1058)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1058)
+....... .......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||..... ......+.. ......
T Consensus 152 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~--~~~~~~ 226 (268)
T 3sxs_A 152 RYVLDDQY-VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN--SEVVLKVSQ--GHRLYR 226 (268)
T ss_dssp EECCTTCE-EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH--HHHHHHHHT--TCCCCC
T ss_pred eecchhhh-hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh--HHHHHHHHc--CCCCCC
Confidence 87655432 22334557788999999998889999999999999999999 9999975421 122111111 111111
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043053 943 PSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHER 991 (1058)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~ 991 (1058)
+ ...+. .+..++..||+.||++|||++++++.|+.+..+.
T Consensus 227 ~---~~~~~------~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 227 P---HLASD------TIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp C---TTSCH------HHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred C---CcChH------HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 1 11122 2344788899999999999999999999887653
No 59
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.6e-40 Score=369.93 Aligned_cols=249 Identities=22% Similarity=0.287 Sum_probs=204.7
Q ss_pred hhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
.+|.+.+.||+|+||.||+|. ..+|+.||||++.... ......+.+.+|+++++.++||||+++++++..
T Consensus 15 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~---------~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 85 (328)
T 3fe3_A 15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ---------LNPTSLQKLFREVRIMKILNHPNIVKLFEVIET 85 (328)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG---------SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred CCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhc---------CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE
Confidence 579999999999999999994 4789999999985432 223446788999999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
++..|+||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 86 ~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~ 160 (328)
T 3fe3_A 86 EKTLYLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGF 160 (328)
T ss_dssp SSEEEEEECCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTC
T ss_pred CCEEEEEEECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccC
Confidence 99999999999999999999764 5689999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCCC-cccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcccc
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKIT-EKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVL 941 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1058)
++...... .....+||+.|+|||++.+..+. .++||||+||++|||++|+.||.... .......+....
T Consensus 161 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~i~~~~----- 230 (328)
T 3fe3_A 161 SNEFTVGG---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN--LKELRERVLRGK----- 230 (328)
T ss_dssp CGGGSSSC---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHCC-----
T ss_pred ceecCCCC---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC--HHHHHHHHHhCC-----
Confidence 98665432 33466799999999999887765 78999999999999999999997542 122222222111
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 942 DPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
.......+. .+.+++.+||+.||.+|||++|++++
T Consensus 231 -~~~p~~~s~------~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 231 -YRIPFYMST------DCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp -CCCCTTSCH------HHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred -CCCCCCCCH------HHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 111111222 23347788999999999999999875
No 60
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=6e-40 Score=367.53 Aligned_cols=262 Identities=25% Similarity=0.373 Sum_probs=208.2
Q ss_pred hhccccceeccccceEEEEEEec----CCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 704 KCLVDANVIGKGCSGVVYRADMD----NGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
++|.+.+.||+|+||+||+|... .+..||||++... ......+.+.+|+.++++++||||++++++
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 118 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG----------YTERQRRDFLSEASIMGQFDHPNIIRLEGV 118 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT----------CCHHHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC----------CCHHHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 67899999999999999999553 4556999998532 233456789999999999999999999999
Q ss_pred EEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeec
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIAD 859 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~D 859 (1058)
+.+++..++||||+++|+|.++++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 119 ~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~D 194 (325)
T 3kul_A 119 VTRGRLAMIVTEYMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSD 194 (325)
T ss_dssp ECGGGCCEEEEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred EEeCCccEEEeeCCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECC
Confidence 99999999999999999999999764 45799999999999999999999999 999999999999999999999999
Q ss_pred cccceeccCCCc-ccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcC
Q 043053 860 FGLAKLVDDGDF-ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKG 937 (1058)
Q Consensus 860 fGl~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1058)
||+++....... ........+|+.|+|||++.+..++.++||||||+++|||++ |..||.... .......+....
T Consensus 195 fg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~--~~~~~~~~~~~~- 271 (325)
T 3kul_A 195 FGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT--NRDVISSVEEGY- 271 (325)
T ss_dssp CSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC--HHHHHHHHHTTC-
T ss_pred CCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHHcCC-
Confidence 999987654321 122334456788999999998889999999999999999999 999997542 222222222211
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043053 938 IQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHERE 992 (1058)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~~ 992 (1058)
........+. .+..++..||+.||++|||++++++.|+.+....+
T Consensus 272 ----~~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 272 ----RLPAPMGCPH------ALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp ----CCCCCTTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred ----CCCCCCCcCH------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 1111112222 23347788999999999999999999998875433
No 61
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.3e-40 Score=364.31 Aligned_cols=264 Identities=23% Similarity=0.345 Sum_probs=205.5
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|.+.+.||+|+||.||+| +..+++.||+|++.... .......+.+.+|+.++++++||||+++++++.+
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~ 82 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPP--------REKEETLKRFEREVHNSSQLSHQNIVSMIDVDEE 82 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCS--------SCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEEC
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCc--------cccHHHHHHHHHHHHHHhcCCCCCCceEEEeeee
Confidence 57999999999999999999 55679999999985331 2334456889999999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
++..|+||||++||+|.+++... ..+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 83 ~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~ 157 (294)
T 4eqm_A 83 DDCYYLVMEYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGI 157 (294)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSS
T ss_pred CCeEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCC
Confidence 99999999999999999999864 5789999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhc-Ccccc
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKK-GIQVL 941 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~-~~~~~ 941 (1058)
++....... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||...... . ....... .....
T Consensus 158 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~--~--~~~~~~~~~~~~~ 232 (294)
T 4eqm_A 158 AKALSETSL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV--S--IAIKHIQDSVPNV 232 (294)
T ss_dssp STTC--------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH--H--HHHHHHSSCCCCH
T ss_pred ccccccccc-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--H--HHHHHhhccCCCc
Confidence 986644321 2234567999999999999999999999999999999999999999754221 1 1111111 11111
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHHhhhhhh
Q 043053 942 DPSLLSRPESEIDEMLQALGVALLCVNASPDERP-TMKDVAAMLKEIKHER 991 (1058)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-t~~~v~~~l~~~~~~~ 991 (1058)
........+. .+..++.+||++||++|| +++++.+.++.+..+.
T Consensus 233 ~~~~~~~~~~------~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 233 TTDVRKDIPQ------SLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp HHHSCTTSCH------HHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred chhcccCCCH------HHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 1111112222 233477889999999999 8999999888765443
No 62
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.7e-40 Score=357.86 Aligned_cols=257 Identities=25% Similarity=0.407 Sum_probs=210.2
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
++|...+.||+|+||.||+|...+++.||||++... ....+++.+|++++++++||||+++++++.++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~------------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 77 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG------------AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTT------------SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccc------------ccCHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 578999999999999999998878999999998532 22346799999999999999999999999999
Q ss_pred CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccccc
Q 043053 784 NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLA 863 (1058)
Q Consensus 784 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~ 863 (1058)
...++||||+++|+|.++++.. ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 153 (269)
T 4hcu_A 78 APICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMT 153 (269)
T ss_dssp SSEEEEEECCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGG
T ss_pred CceEEEEEeCCCCcHHHHHHhc-CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccc
Confidence 9999999999999999999764 45789999999999999999999999 9999999999999999999999999999
Q ss_pred eeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcCccccC
Q 043053 864 KLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKGIQVLD 942 (1058)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1058)
+...... ........+|+.|+|||++.+..++.++||||+|+++|||++ |+.||.... .......+... ..
T Consensus 154 ~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~--~~~~~~~~~~~--~~--- 225 (269)
T 4hcu_A 154 RFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--NSEVVEDISTG--FR--- 225 (269)
T ss_dssp GGBCCHH-HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--HHHHHHHHHTT--CC---
T ss_pred ccccccc-cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC--HHHHHHHHhcC--cc---
Confidence 8654432 123334557889999999998999999999999999999999 999997542 22222222211 11
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 943 PSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
+......+. .+.+++..||+.||++|||+++++++|+++...
T Consensus 226 ~~~~~~~~~------~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 226 LYKPRLAST------HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp CCCCTTSCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCCcCCH------HHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 111111122 234477889999999999999999999988653
No 63
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=7.6e-40 Score=370.46 Aligned_cols=260 Identities=21% Similarity=0.292 Sum_probs=207.8
Q ss_pred HHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEE
Q 043053 702 VLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCC 780 (1058)
Q Consensus 702 ~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 780 (1058)
+.+.|.+.+.||+|+||.||+| +..+|+.||||++....... .......+.+.+|+.++++++||||+++++++
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~-----~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~ 84 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRA-----SRRGVCREEIEREVSILRQVLHPNIITLHDVY 84 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTT-----CSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEcccccc-----ccchhHHHHHHHHHHHHHhCCCcCCCcEEEEE
Confidence 4468999999999999999999 55579999999986442211 11223467899999999999999999999999
Q ss_pred EcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCC----Cee
Q 043053 781 WNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEF----EPY 856 (1058)
Q Consensus 781 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~----~~k 856 (1058)
.++...|+||||++||+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+|
T Consensus 85 ~~~~~~~lv~e~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vk 159 (361)
T 2yab_A 85 ENRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIK 159 (361)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHTT--CSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEE
T ss_pred EeCCEEEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEE
Confidence 999999999999999999999976 36799999999999999999999999 999999999999998877 799
Q ss_pred eeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhc
Q 043053 857 IADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKK 936 (1058)
Q Consensus 857 l~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 936 (1058)
|+|||+++...... .....+||+.|+|||++.+..++.++||||+||++|+|++|..||.... .......+...
T Consensus 160 l~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~--~~~~~~~i~~~- 233 (361)
T 2yab_A 160 LIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANITAV- 233 (361)
T ss_dssp ECCCSSCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--HHHHHHHHHTT-
T ss_pred EEecCCceEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhc-
Confidence 99999998765532 2345679999999999999899999999999999999999999997542 11222111111
Q ss_pred CccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 937 GIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
....++......+. .+.+++..||.+||++|||++|++++-
T Consensus 234 -~~~~~~~~~~~~s~------~~~~li~~~L~~dP~~R~t~~e~l~hp 274 (361)
T 2yab_A 234 -SYDFDEEFFSQTSE------LAKDFIRKLLVKETRKRLTIQEALRHP 274 (361)
T ss_dssp -CCCCCHHHHTTSCH------HHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred -CCCCCchhccCCCH------HHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 11111111112222 234578889999999999999998754
No 64
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.4e-39 Score=361.41 Aligned_cols=264 Identities=27% Similarity=0.374 Sum_probs=202.3
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
++|.+.+.||+|+||+||+|... ..+|||++... .......+.+.+|++++++++||||+++++++. .
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~---------~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~ 103 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVV---------DPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-K 103 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCS---------SCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-S
T ss_pred cceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecC---------CCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-c
Confidence 67889999999999999999764 35889987532 123345678999999999999999999999875 5
Q ss_pred CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccccc
Q 043053 784 NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLA 863 (1058)
Q Consensus 784 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~ 863 (1058)
+..++||||+++|+|.+++... ...+++..++.|+.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a 179 (307)
T 3lb7_A 104 DNLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLA 179 (307)
T ss_dssp SSCEEEEECCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSS
T ss_pred CcEEEEEecCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCc
Confidence 5689999999999999999754 46799999999999999999999999 9999999999999999999999999999
Q ss_pred eeccCCCcccccccccCcCCccCccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccc
Q 043053 864 KLVDDGDFARSSNTVAGSYGYIAPEYGY---MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQV 940 (1058)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1058)
+...............||+.|+|||++. +..++.++|||||||++|||++|+.||...... ......+........
T Consensus 180 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~-~~~~~~~~~~~~~~~ 258 (307)
T 3lb7_A 180 TVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR-DQIIFMVGRGYASPD 258 (307)
T ss_dssp CC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-HHHHHHHHHTCCCCC
T ss_pred eecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcH-HHHHHHHhcCCCCcc
Confidence 8654322223344567999999999876 567888999999999999999999999754321 222222222111111
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043053 941 LDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHER 991 (1058)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~ 991 (1058)
........+. + +..++..||+.||++||++.++++.++.+....
T Consensus 259 -~~~~~~~~~~---~---l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 259 -LSKLYKNCPK---A---MKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp -STTSCSSSCH---H---HHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred -hhhhhcCCcH---H---HHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 1111122222 2 334778899999999999999999999887543
No 65
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.9e-40 Score=389.51 Aligned_cols=382 Identities=18% Similarity=0.193 Sum_probs=193.5
Q ss_pred cEEEccCCcCCCCCCCCCCCCCcccEEecCCCCCCCCCChhhcCcccCCEEeccccCCCCcc-ccccccchhhhHHhhhh
Q 043053 27 QTLVISDANLTGSIPFDIGDCVGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNSNQLTGKI-PVELSNCKSLRKLLLFD 105 (1058)
Q Consensus 27 ~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n~~~~~~-p~~l~~l~~L~~L~L~~ 105 (1058)
+.++.++++++ .+|. +. ++|++|+|++|++++..|..++++++|++|+|++|.+.+.+ |..|.++++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 34566666665 5555 22 56666666666666555666666666666666666654333 23344444444444433
Q ss_pred ccccCCChhhhcccccchhhhcCCCccccCCCCccccCCCCCceecccCccccccCCccccCCCccceeeeecccccccc
Q 043053 106 NALAGNIPAELGRLSNLEEMRAGGNKDIVGKIPAELGDCSNMTALGLADTQVSGSLPASLGKLSKLQTLSIYTTMISGEI 185 (1058)
Q Consensus 106 n~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~ 185 (1058)
|.+. ...|..++.+++|++|++++|++.+..+..
T Consensus 89 n~l~-------------------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~--------------------- 122 (455)
T 3v47_A 89 NQFL-------------------------QLETGAFNGLANLEVLTLTQCNLDGAVLSG--------------------- 122 (455)
T ss_dssp CTTC-------------------------EECTTTTTTCTTCCEEECTTSCCBTHHHHS---------------------
T ss_pred CccC-------------------------ccChhhccCcccCCEEeCCCCCCCccccCc---------------------
Confidence 3332 112333444445555555555554333322
Q ss_pred CccccCCCCccEEEccCCcCCCCCCCC-cCCCCCcceeecccccccCCCCccccCc--CCccEEEeecCCCcCcCCcc--
Q 043053 186 PAEIGNCSELVSLFLYENSLSGSIPPE-IGKLKKLEELFLWQNSLVGAIPEEIGNC--TSLKMIDFSLNSLSGTIPLS-- 260 (1058)
Q Consensus 186 ~~~l~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~l~~l--~~L~~L~L~~n~l~~~~~~~-- 260 (1058)
..++.+++|++|+|++|.+++..|.. +.++++|++|++++|.+.+..+..+..+ .+|+.|++++|.+.+..+..
T Consensus 123 -~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~ 201 (455)
T 3v47_A 123 -NFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLG 201 (455)
T ss_dssp -STTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTT
T ss_pred -ccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhcc
Confidence 11444455555555555554443433 4445555555555555544444444433 44555555555554333222
Q ss_pred ------ccccCCcceeecccCccCCCcccccccc---ccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCCh
Q 043053 261 ------IGGLSELEEFMISDNNVSGSIPANLANA---TNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPS 331 (1058)
Q Consensus 261 ------~~~l~~L~~L~l~~n~l~~~~~~~~~~l---~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 331 (1058)
+..+++|++|++++|.+.+..+..+..+ ++|+.|++++|.+.+.. +..+.+....+.
T Consensus 202 ~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~--------------~~~~~~~~~~~~ 267 (455)
T 3v47_A 202 WEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS--------------FGHTNFKDPDNF 267 (455)
T ss_dssp HHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC--------------TTCCSSCCCCTT
T ss_pred ccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccc--------------cchhhhccCccc
Confidence 2234555666666665555555444433 55666666666544321 111222222222
Q ss_pred hhhcc--CcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCcc
Q 043053 332 TLASC--SNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLK 409 (1058)
Q Consensus 332 ~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 409 (1058)
.+..+ ++|+.|++++|++.+..|..+..+++|++|+|++|.+++..|..|.++++|++|+|++|+++++.+..|..++
T Consensus 268 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 347 (455)
T 3v47_A 268 TFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLD 347 (455)
T ss_dssp TTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCT
T ss_pred ccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcc
Confidence 23222 4566666666666655555555555555555555555555555555555555555555555555555555555
Q ss_pred ccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCC
Q 043053 410 TLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQI 473 (1058)
Q Consensus 410 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 473 (1058)
+|++|+|++|++++..|..|..+++|++|+|++|+|+++.+..|..+++|++|++++|++++..
T Consensus 348 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 411 (455)
T 3v47_A 348 KLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 411 (455)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred cCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCC
Confidence 5555555555555555555555555555555555555544444555555555555555555433
No 66
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.4e-39 Score=364.81 Aligned_cols=253 Identities=21% Similarity=0.231 Sum_probs=205.5
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|...+.||+|+||+||+| +..+|+.||||++.+.... .....+.+.+|+.++++++||||+++++++.+
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~--------~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~ 76 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII--------AKDEVAHTVTESRVLQNTRHPFLTALKYAFQT 76 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH--------HTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhh--------hhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe
Confidence 67999999999999999999 4557999999998644211 22345778999999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
.+..|+||||++||+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 77 ~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~ 151 (337)
T 1o6l_A 77 HDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGL 151 (337)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccc
Confidence 99999999999999999999763 5789999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccccC
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVLD 942 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1058)
++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+... .
T Consensus 152 a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--~~~~~~~i~~~------~ 221 (337)
T 1o6l_A 152 CKEGISDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--HERLFELILME------E 221 (337)
T ss_dssp CBCSCCTT--CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHC------C
T ss_pred hhhcccCC--CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC--HHHHHHHHHcC------C
Confidence 98643322 23446679999999999999999999999999999999999999997532 12222222111 1
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHHH
Q 043053 943 PSLLSRPESEIDEMLQALGVALLCVNASPDERP-----TMKDVAAMLK 985 (1058)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----t~~~v~~~l~ 985 (1058)
.......+. .+.+++..||+.||++|| +++|++++-.
T Consensus 222 ~~~p~~~s~------~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~ 263 (337)
T 1o6l_A 222 IRFPRTLSP------EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263 (337)
T ss_dssp CCCCTTSCH------HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred CCCCCCCCH------HHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCC
Confidence 111112222 234477889999999999 8999987643
No 67
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.6e-40 Score=374.74 Aligned_cols=263 Identities=23% Similarity=0.344 Sum_probs=210.6
Q ss_pred hhccccceeccccceEEEEEEe------cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCccccee
Q 043053 704 KCLVDANVIGKGCSGVVYRADM------DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFL 777 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 777 (1058)
++|.+.+.||+|+||+||+|.. .+++.||||++... .......++.+|+.++++++||||++++
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~~E~~~l~~l~hpnIv~~~ 140 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV----------CSEQDELDFLMEALIISKFNHQNIVRCI 140 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS----------CCHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc----------cChhhHHHHHHHHHHHHhCCCCCCCeEE
Confidence 6789999999999999999963 25678999998432 2334456789999999999999999999
Q ss_pred eEEEcCCCceEEEEecCCCChhhhhhhcC-----CCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCC
Q 043053 778 GCCWNRNNRLLMYDYMPNGSLGSLLHERT-----GNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLE 852 (1058)
Q Consensus 778 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~ 852 (1058)
+++.+....++||||+++|+|.++++... ...+++..++.++.||++||+|||+. +|+||||||+|||++.+
T Consensus 141 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~ 217 (367)
T 3l9p_A 141 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP 217 (367)
T ss_dssp EEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCS
T ss_pred EEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecC
Confidence 99999999999999999999999998643 24589999999999999999999999 99999999999999965
Q ss_pred C---CeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhH
Q 043053 853 F---EPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHV 928 (1058)
Q Consensus 853 ~---~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~ 928 (1058)
+ .+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |..||... .....
T Consensus 218 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~--~~~~~ 295 (367)
T 3l9p_A 218 GPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--SNQEV 295 (367)
T ss_dssp STTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHH
T ss_pred CCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHH
Confidence 5 599999999986544333334445678999999999999999999999999999999998 99999754 22233
Q ss_pred HHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043053 929 VDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHERE 992 (1058)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~~ 992 (1058)
...+..... .......+. + +..++..||+.||++|||+++++++++.+.....
T Consensus 296 ~~~i~~~~~-----~~~~~~~~~---~---l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 296 LEFVTSGGR-----MDPPKNCPG---P---VYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp HHHHHTTCC-----CCCCTTCCH---H---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred HHHHHcCCC-----CCCCccCCH---H---HHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 332222211 111112222 2 3347888999999999999999999998876543
No 68
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=363.04 Aligned_cols=269 Identities=22% Similarity=0.284 Sum_probs=207.6
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|.+.++||+|+||+||+| +..+++.||||++.... .....+.+.+|++++++++||||+++++++..
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 78 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS----------FLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE 78 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG----------GGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccc----------ccchHHHHHHHHHHHHhcCCCCcceEEEEeec
Confidence 57899999999999999999 45569999999985432 22335778899999999999999999999987
Q ss_pred CC--CceEEEEecCCCChhhhhhhcC-CCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEE----cCCCCe
Q 043053 783 RN--NRLLMYDYMPNGSLGSLLHERT-GNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILI----GLEFEP 855 (1058)
Q Consensus 783 ~~--~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill----~~~~~~ 855 (1058)
.. ..++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+||++ +.++.+
T Consensus 79 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~ 155 (319)
T 4euu_A 79 TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVY 155 (319)
T ss_dssp TTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEE
T ss_pred CCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceE
Confidence 65 6699999999999999998643 23489999999999999999999999 99999999999999 778889
Q ss_pred eeeccccceeccCCCcccccccccCcCCccCccccc--------cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCh-
Q 043053 856 YIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGY--------MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGS- 926 (1058)
Q Consensus 856 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~- 926 (1058)
||+|||+++...... ......||+.|+|||++. +..++.++|||||||++|||++|+.||........
T Consensus 156 kL~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~ 232 (319)
T 4euu_A 156 KLTDFGAARELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN 232 (319)
T ss_dssp EECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGC
T ss_pred EEccCCCceecCCCC---ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchh
Confidence 999999998765543 233457999999999876 56789999999999999999999999975432221
Q ss_pred -hHHHHHHhhcCcc-------------ccCCCCCC--CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 927 -HVVDWVRQKKGIQ-------------VLDPSLLS--RPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 927 -~~~~~~~~~~~~~-------------~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
.....+....... ...+.... ........ .+.+++..||+.||++|||++|++++..+....
T Consensus 233 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~ 310 (319)
T 4euu_A 233 KEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQV--LLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (319)
T ss_dssp HHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHH--HHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-
T ss_pred HHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHH--HhHHHHHHhccCChhhhccHHHhhhccHHHhhc
Confidence 1111111111100 00001111 11122222 234588999999999999999999988765543
No 69
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=4.8e-40 Score=374.72 Aligned_cols=263 Identities=24% Similarity=0.358 Sum_probs=209.8
Q ss_pred HhhccccceeccccceEEEEEEe------cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccc
Q 043053 703 LKCLVDANVIGKGCSGVVYRADM------DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVR 775 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 775 (1058)
.++|.+.+.||+|+||.||+|.. .+++.||||++... ......+.+.+|+++++++ +||||++
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG----------ATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT----------CCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc----------CCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 37899999999999999999952 35688999998532 2233457899999999999 7999999
Q ss_pred eeeEEEcCCC-ceEEEEecCCCChhhhhhhcCC-----------------------------------------------
Q 043053 776 FLGCCWNRNN-RLLMYDYMPNGSLGSLLHERTG----------------------------------------------- 807 (1058)
Q Consensus 776 ~~~~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~----------------------------------------------- 807 (1058)
+++++.+.+. .++||||+++|+|.++++....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 9999987655 8999999999999999986432
Q ss_pred -----------------CCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccccceeccCCC
Q 043053 808 -----------------NALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGD 870 (1058)
Q Consensus 808 -----------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~~~~~~~~ 870 (1058)
..+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 1289999999999999999999999 99999999999999999999999999998765444
Q ss_pred cccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcCccccCCCCCCCC
Q 043053 871 FARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKGIQVLDPSLLSRP 949 (1058)
Q Consensus 871 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 949 (1058)
.........||+.|+|||++.+..++.++|||||||++|||++ |+.||...... ......+..... .......
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~-----~~~~~~~ 321 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEGTR-----MRAPDYT 321 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HHHHHHHHHTCC-----CCCCTTC
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh-HHHHHHHHcCCC-----CCCCCCC
Confidence 3334456678999999999999999999999999999999998 99999765332 222222222111 1111112
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 950 ESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 950 ~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
+. .+.+++..||+.||++|||+++++++|+++...
T Consensus 322 ~~------~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 322 TP------EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp CH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CH------HHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 22 234477889999999999999999999988654
No 70
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.5e-39 Score=363.21 Aligned_cols=261 Identities=26% Similarity=0.382 Sum_probs=212.7
Q ss_pred hhccccceeccccceEEEEEEe------cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCccccee
Q 043053 704 KCLVDANVIGKGCSGVVYRADM------DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFL 777 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 777 (1058)
++|.+.+.||+|+||.||+|.. .+++.||||++... ......+.+.+|++++++++||||++++
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~~E~~~l~~l~hp~iv~~~ 92 (314)
T 2ivs_A 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN----------ASPSELRDLLSEFNVLKQVNHPHVIKLY 92 (314)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT----------CCHHHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC----------CCHHHHHHHHHHHHHHhhCCCCceeeEE
Confidence 6899999999999999999954 34588999998532 2334467899999999999999999999
Q ss_pred eEEEcCCCceEEEEecCCCChhhhhhhcCC----------------------CCCCHHHHHHHHHHHHHHhhcccccCCC
Q 043053 778 GCCWNRNNRLLMYDYMPNGSLGSLLHERTG----------------------NALEWELRYQILLGAAQGLAYLHHDCVP 835 (1058)
Q Consensus 778 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~ 835 (1058)
+++.+.+..++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+.
T Consensus 93 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--- 169 (314)
T 2ivs_A 93 GACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM--- 169 (314)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---
T ss_pred EEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---
Confidence 999999999999999999999999986432 3489999999999999999999999
Q ss_pred CeEeCCCCCCcEEEcCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-C
Q 043053 836 PIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-G 914 (1058)
Q Consensus 836 ~ivHrDikp~Nill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g 914 (1058)
+|+||||||+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||+|+++|||++ |
T Consensus 170 ~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 249 (314)
T 2ivs_A 170 KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249 (314)
T ss_dssp TEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred CCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999987765443333445567889999999998889999999999999999999 9
Q ss_pred CCCCCCCCCCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 915 KQPIDPTIPDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 915 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
+.||..... ......+..... +......+. .+..++..||+.||++|||++++++.|+++..+
T Consensus 250 ~~p~~~~~~--~~~~~~~~~~~~-----~~~~~~~~~------~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 250 GNPYPGIPP--ERLFNLLKTGHR-----MERPDNCSE------EMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp CCSSTTCCG--GGHHHHHHTTCC-----CCCCTTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCCCCCH--HHHHHHhhcCCc-----CCCCccCCH------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 999975532 233333322211 111122222 233477889999999999999999999987654
No 71
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=377.50 Aligned_cols=259 Identities=19% Similarity=0.238 Sum_probs=207.4
Q ss_pred HHHHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceee
Q 043053 700 EQVLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLG 778 (1058)
Q Consensus 700 ~~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~ 778 (1058)
..+.++|.+.+.||+|+||+||+| +..+|+.||+|++.... ......+.+.+|++++++++||||+++++
T Consensus 7 ~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~---------~~~~~~~~~~~E~~il~~l~hpnIv~l~~ 77 (444)
T 3soa_A 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKK---------LSARDHQKLEREARICRLLKHPNIVRLHD 77 (444)
T ss_dssp CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCS---------CHHHHHHHHHHHHHHHHHCCBTTBCCEEE
T ss_pred ccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEccc---------CCHHHHHHHHHHHHHHHhCCCcCCCeEEE
Confidence 456789999999999999999999 56789999999985432 12234577899999999999999999999
Q ss_pred EEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEc---CCCCe
Q 043053 779 CCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIG---LEFEP 855 (1058)
Q Consensus 779 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~---~~~~~ 855 (1058)
++.+++..|+||||++||+|.+++... ..+++..+..++.||++||+|||+. +|+||||||+|||++ .++.+
T Consensus 78 ~~~~~~~~~lv~E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~v 152 (444)
T 3soa_A 78 SISEEGHHYLIFDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAV 152 (444)
T ss_dssp EEECSSEEEEEECCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCE
T ss_pred EEEECCEEEEEEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcE
Confidence 999999999999999999999999874 5699999999999999999999999 999999999999998 45789
Q ss_pred eeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhh
Q 043053 856 YIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQK 935 (1058)
Q Consensus 856 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 935 (1058)
||+|||+++...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||... ........+...
T Consensus 153 kL~DFG~a~~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~--~~~~~~~~i~~~ 228 (444)
T 3soa_A 153 KLADFGLAIEVEGEQ--QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE--DQHRLYQQIKAG 228 (444)
T ss_dssp EECCCSSCBCCCTTC--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHT
T ss_pred EEccCceeEEecCCC--ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCc--cHHHHHHHHHhC
Confidence 999999998765432 2334567999999999999989999999999999999999999999753 222222222221
Q ss_pred cCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 936 KGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
. ...........+. .+.+++..||+.||++|||++|++++-
T Consensus 229 ~--~~~~~~~~~~~s~------~~~~li~~~L~~dP~~Rpta~e~L~hp 269 (444)
T 3soa_A 229 A--YDFPSPEWDTVTP------EAKDLINKMLTINPSKRITAAEALKHP 269 (444)
T ss_dssp C--CCCCTTTTTTSCH------HHHHHHHHHSCSSTTTSCCHHHHHHSC
T ss_pred C--CCCCccccccCCH------HHHHHHHHHcCCChhHCCCHHHHhcCc
Confidence 1 1111111112222 234577889999999999999999853
No 72
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.4e-39 Score=361.18 Aligned_cols=262 Identities=27% Similarity=0.369 Sum_probs=200.7
Q ss_pred HhhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcc--cCCCcccceeeEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGS--IRHKNIVRFLGCC 780 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~ 780 (1058)
.++|.+.+.||+|+||+||+|.. +++.||||++... ....+.+|.+++.. ++||||+++++++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--------------~~~~~~~e~~~~~~~~l~h~niv~~~~~~ 71 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR--------------DEKSWFRETELYNTVMLRHENILGFIASD 71 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG--------------GHHHHHHHHHHHHHTCCCCTTBCCEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc--------------cchhhHHHHHHHHHhhccCcCeeeEEEee
Confidence 36899999999999999999977 5899999998432 23455666666665 7899999999987
Q ss_pred EcC----CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhccc--------ccCCCCeEeCCCCCCcEE
Q 043053 781 WNR----NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLH--------HDCVPPIVHRDIKANNIL 848 (1058)
Q Consensus 781 ~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivHrDikp~Nil 848 (1058)
... ...++||||+++|+|.++++. ..+++..+++++.|+++||+||| +. +|+||||||+|||
T Consensus 72 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil 145 (301)
T 3q4u_A 72 MTSRHSSTQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNIL 145 (301)
T ss_dssp EEEETTEEEEEEEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEE
T ss_pred ccccCCCceeEEehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEE
Confidence 643 447899999999999999964 56999999999999999999999 77 9999999999999
Q ss_pred EcCCCCeeeeccccceeccCCCcc--cccccccCcCCccCccccccC------CCCcccchhhHHHHHHHHHhC------
Q 043053 849 IGLEFEPYIADFGLAKLVDDGDFA--RSSNTVAGSYGYIAPEYGYMM------KITEKSDVYSYGVVVLEVLTG------ 914 (1058)
Q Consensus 849 l~~~~~~kl~DfGl~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvvl~elltg------ 914 (1058)
++.++.+||+|||+++........ .......||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 146 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~ 225 (301)
T 3q4u_A 146 VKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGI 225 (301)
T ss_dssp ECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTB
T ss_pred EcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccc
Confidence 999999999999999876543321 112345799999999998776 455789999999999999999
Q ss_pred ----CCCCCCCCCCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhh
Q 043053 915 ----KQPIDPTIPDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEI 987 (1058)
Q Consensus 915 ----~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~ 987 (1058)
+.||....+............. .....+...... ........+.+++..||+.||++|||++++++.|+++
T Consensus 226 ~~~~~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 226 VEDYKPPFYDVVPNDPSFEDMRKVVC-VDQQRPNIPNRW-FSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CCCCCCTTTTTSCSSCCHHHHHHHHT-TSCCCCCCCGGG-GGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cccccccccccCCCCcchhhhhHHHh-ccCCCCCCChhh-ccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 8888765444333332222111 111112111110 0111223345689999999999999999999999876
No 73
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=8.1e-40 Score=367.16 Aligned_cols=261 Identities=25% Similarity=0.405 Sum_probs=202.5
Q ss_pred hhccccceeccccceEEEEEE-ecCCcE----EEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceee
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNGEV----IAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLG 778 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~----vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~ 778 (1058)
++|...+.||+|+||+||+|. ..+++. ||+|.+... ......+++.+|+.++++++||||+++++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~----------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 84 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA----------TSPKANKEILDEAYVMASVDNPHVCRLLG 84 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-----------------CHHHHHHHHHHHHHCCBTTBCCEEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc----------cCHHHHHHHHHHHHHHHhCCCCCEeEEEE
Confidence 578999999999999999995 445554 577776422 22344678999999999999999999999
Q ss_pred EEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeee
Q 043053 779 CCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIA 858 (1058)
Q Consensus 779 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~ 858 (1058)
++.++ ..++||||+++|+|.+++... ...+++..++.|+.|+++||+|||+. +|+||||||+|||++.++.+||+
T Consensus 85 ~~~~~-~~~~v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~ 159 (327)
T 3poz_A 85 ICLTS-TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKIT 159 (327)
T ss_dssp EEESS-SEEEEEECCTTCBHHHHHHHS-TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEEC
T ss_pred EEecC-CeEEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEc
Confidence 99875 478999999999999999875 46799999999999999999999999 99999999999999999999999
Q ss_pred ccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcC
Q 043053 859 DFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKG 937 (1058)
Q Consensus 859 DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1058)
|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||.... .......+.....
T Consensus 160 Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--~~~~~~~~~~~~~ 237 (327)
T 3poz_A 160 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILEKGER 237 (327)
T ss_dssp CTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--GGGHHHHHHTTCC
T ss_pred cCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCC--HHHHHHHHHcCCC
Confidence 9999987765443334445567889999999999999999999999999999999 999997543 2233333332211
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043053 938 IQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHERE 992 (1058)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~~ 992 (1058)
. . .+..... .+..++.+||+.||++|||+.++++.|+.+.....
T Consensus 238 ~-----~---~~~~~~~---~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~~ 281 (327)
T 3poz_A 238 L-----P---QPPICTI---DVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 281 (327)
T ss_dssp C-----C---CCTTBCH---HHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSHH
T ss_pred C-----C---CCccCCH---HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhhh
Confidence 1 1 1111112 23447888999999999999999999998876544
No 74
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=364.89 Aligned_cols=261 Identities=23% Similarity=0.306 Sum_probs=208.0
Q ss_pred HHHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 701 QVLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 701 ~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
.+.++|.+.+.||+|+||.||+| +..+|+.||||++...... ........+.+.+|+.++++++||||++++++
T Consensus 8 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~ 82 (326)
T 2y0a_A 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTK-----SSRRGVSREDIEREVSILKEIQHPNVITLHEV 82 (326)
T ss_dssp CHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCST-----TCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred CcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccc-----cccchhhHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 45678999999999999999999 4557999999998544221 11122346789999999999999999999999
Q ss_pred EEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCC----Ce
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEF----EP 855 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~----~~ 855 (1058)
+.++...++||||+++|+|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++ .+
T Consensus 83 ~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~ 157 (326)
T 2y0a_A 83 YENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRI 157 (326)
T ss_dssp EECSSEEEEEEECCCSCBHHHHHTT--SSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCE
T ss_pred EEeCCEEEEEEEcCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCE
Confidence 9999999999999999999999976 36789999999999999999999999 999999999999999887 79
Q ss_pred eeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhh
Q 043053 856 YIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQK 935 (1058)
Q Consensus 856 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 935 (1058)
||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... .......+...
T Consensus 158 kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~~~~~~ 232 (326)
T 2y0a_A 158 KIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANVSAV 232 (326)
T ss_dssp EECCCTTCEECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--HHHHHHHHHHT
T ss_pred EEEECCCCeECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC--HHHHHHHHHhc
Confidence 999999998775432 2335679999999999998899999999999999999999999997542 11111111111
Q ss_pred cCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 936 KGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
. ...........+. .+.+++..||+.||++|||+++++++-
T Consensus 233 ~--~~~~~~~~~~~~~------~~~~li~~~L~~dP~~Rpt~~e~l~hp 273 (326)
T 2y0a_A 233 N--YEFEDEYFSNTSA------LAKDFIRRLLVKDPKKRMTIQDSLQHP 273 (326)
T ss_dssp C--CCCCHHHHTTSCH------HHHHHHHHHSCSSGGGSCCHHHHHHST
T ss_pred C--CCcCccccccCCH------HHHHHHHHHccCChhhCCCHHHHhcCC
Confidence 1 0111111111122 234578889999999999999999864
No 75
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.2e-39 Score=358.07 Aligned_cols=257 Identities=25% Similarity=0.382 Sum_probs=207.4
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
++|.+.+.||+|+||+||+|...++..||||++... ....+++.+|++++++++||||+++++++.++
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~------------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 91 (283)
T 3gen_A 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG------------SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91 (283)
T ss_dssp GGEEEEEECC---CEEEEEEEETTTEEEEEEEECTT------------SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred HHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCC------------CCCHHHHHHHHHHHhcCCCCCEeeEEEEEecC
Confidence 689999999999999999998888899999998532 22346789999999999999999999999999
Q ss_pred CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccccc
Q 043053 784 NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLA 863 (1058)
Q Consensus 784 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~ 863 (1058)
...++||||+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 92 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~ 167 (283)
T 3gen_A 92 RPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLS 167 (283)
T ss_dssp SSEEEEECCCTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGG
T ss_pred CCeEEEEeccCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccc
Confidence 9999999999999999999764 35689999999999999999999999 9999999999999999999999999999
Q ss_pred eeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcCccccC
Q 043053 864 KLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKGIQVLD 942 (1058)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1058)
+....... .......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||.... .......+... . .
T Consensus 168 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~--~~~~~~~~~~~--~---~ 239 (283)
T 3gen_A 168 RYVLDDEY-TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT--NSETAEHIAQG--L---R 239 (283)
T ss_dssp GGBCCHHH-HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC--HHHHHHHHHTT--C---C
T ss_pred cccccccc-ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC--hhHHHHHHhcc--c---C
Confidence 86644321 22334457888999999998899999999999999999998 999997542 12222222211 1 1
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 943 PSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
.......+. .+..++..||+.||++|||+++++++|+++..+
T Consensus 240 ~~~~~~~~~------~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 240 LYRPHLASE------KVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp CCCCTTCCH------HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCcCCH------HHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 111111222 234478889999999999999999999988654
No 76
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-39 Score=369.43 Aligned_cols=263 Identities=27% Similarity=0.430 Sum_probs=209.9
Q ss_pred hhccccceeccccceEEEEEEec------CCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCccccee
Q 043053 704 KCLVDANVIGKGCSGVVYRADMD------NGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFL 777 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 777 (1058)
++|.+.+.||+|+||.||+|... +++.||||++... ......+.+.+|+.++++++||||++++
T Consensus 47 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~~E~~~l~~l~hp~iv~~~ 116 (343)
T 1luf_A 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE----------ASADMQADFQREAALMAEFDNPNIVKLL 116 (343)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT----------CCHHHHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred HHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccc----------cCHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 68899999999999999999553 4589999998533 2334567899999999999999999999
Q ss_pred eEEEcCCCceEEEEecCCCChhhhhhhcC----------------------CCCCCHHHHHHHHHHHHHHhhcccccCCC
Q 043053 778 GCCWNRNNRLLMYDYMPNGSLGSLLHERT----------------------GNALEWELRYQILLGAAQGLAYLHHDCVP 835 (1058)
Q Consensus 778 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~ 835 (1058)
+++.+++..++||||+++|+|.++++... ...+++..++.++.||++||+|||+.
T Consensus 117 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~--- 193 (343)
T 1luf_A 117 GVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER--- 193 (343)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred EEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence 99999999999999999999999998642 15789999999999999999999999
Q ss_pred CeEeCCCCCCcEEEcCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-C
Q 043053 836 PIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-G 914 (1058)
Q Consensus 836 ~ivHrDikp~Nill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g 914 (1058)
+|+||||||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |
T Consensus 194 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 273 (343)
T 1luf_A 194 KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG 273 (343)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred CeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcC
Confidence 999999999999999999999999999987654333333445668999999999998899999999999999999999 9
Q ss_pred CCCCCCCCCCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043053 915 KQPIDPTIPDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHERE 992 (1058)
Q Consensus 915 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~~ 992 (1058)
..||.... .......+..... +......+. .+..++..||+.||++|||+.++++.|+++....+
T Consensus 274 ~~p~~~~~--~~~~~~~~~~~~~-----~~~~~~~~~------~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 274 LQPYYGMA--HEEVIYYVRDGNI-----LACPENCPL------ELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp CCTTTTSC--HHHHHHHHHTTCC-----CCCCTTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred CCcCCCCC--hHHHHHHHhCCCc-----CCCCCCCCH------HHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 99997542 2222222222111 111112222 23447788999999999999999999998876543
No 77
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=371.88 Aligned_cols=262 Identities=26% Similarity=0.381 Sum_probs=213.2
Q ss_pred hhccccceeccccceEEEEEEe--------cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCccc
Q 043053 704 KCLVDANVIGKGCSGVVYRADM--------DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIV 774 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 774 (1058)
++|.+.+.||+|+||+||+|.. ..+..||||++... ......+++.+|+++++++ +||||+
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~~E~~~l~~l~~hpnIv 138 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD----------ATEKDLSDLISEMEMMKMIGKHKNII 138 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT----------CCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc----------cCHHHHHHHHHHHHHHHHhcCCchhh
Confidence 6899999999999999999954 23367999998533 2334467899999999999 899999
Q ss_pred ceeeEEEcCCCceEEEEecCCCChhhhhhhcC--------------CCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeC
Q 043053 775 RFLGCCWNRNNRLLMYDYMPNGSLGSLLHERT--------------GNALEWELRYQILLGAAQGLAYLHHDCVPPIVHR 840 (1058)
Q Consensus 775 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHr 840 (1058)
++++++..++..++||||+++|+|.+++.... ...+++..++.|+.|+++||+|||+. +|+||
T Consensus 139 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~ 215 (382)
T 3tt0_A 139 NLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHR 215 (382)
T ss_dssp CEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred hheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecC
Confidence 99999999999999999999999999998753 24589999999999999999999999 99999
Q ss_pred CCCCCcEEEcCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCC
Q 043053 841 DIKANNILIGLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPID 919 (1058)
Q Consensus 841 Dikp~Nill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~ 919 (1058)
||||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 216 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~ 295 (382)
T 3tt0_A 216 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 295 (382)
T ss_dssp CCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred CCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999987765444344455668899999999999999999999999999999999 999997
Q ss_pred CCCCCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043053 920 PTIPDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHER 991 (1058)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~ 991 (1058)
.. ........+..... .......+. + +..++..||+.||++|||++++++.|+++....
T Consensus 296 ~~--~~~~~~~~~~~~~~-----~~~~~~~~~---~---l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 296 GV--PVEELFKLLKEGHR-----MDKPSNCTN---E---LYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp TC--CHHHHHHHHHTTCC-----CCCCSSCCH---H---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred CC--CHHHHHHHHHcCCC-----CCCCccCCH---H---HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 54 22233332222211 111112222 2 334778899999999999999999999886543
No 78
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.1e-40 Score=365.02 Aligned_cols=255 Identities=18% Similarity=0.234 Sum_probs=206.7
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.++|.+.+.||+|+||.||+| +..+++.||+|.+... ....+.+.+|+++++.++||||+++++++.
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~------------~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~ 71 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK------------GTDQVLVKKEISILNIARHRNILHLHESFE 71 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC------------THHHHHHHHHHHHHHHSCCTTBCCEEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC------------cccHHHHHHHHHHHHhCCCCCCCeEeEEEe
Confidence 468999999999999999999 5567899999988422 223567899999999999999999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcC--CCCeeeec
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGL--EFEPYIAD 859 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~--~~~~kl~D 859 (1058)
+.+..++||||++||+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 72 ~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~D 147 (321)
T 1tki_A 72 SMEELVMIFEFISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIE 147 (321)
T ss_dssp ETTEEEEEECCCCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECC
T ss_pred cCCEEEEEEEeCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEE
Confidence 999999999999999999999763 35789999999999999999999999 9999999999999987 78999999
Q ss_pred cccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcc
Q 043053 860 FGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQ 939 (1058)
Q Consensus 860 fGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1058)
||+++...... ......||+.|+|||++.+..++.++||||+||++|+|++|..||.... .......+.... .
T Consensus 148 fg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~~i~~~~--~ 220 (321)
T 1tki_A 148 FGQARQLKPGD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET--NQQIIENIMNAE--Y 220 (321)
T ss_dssp CTTCEECCTTC---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHHHTC--C
T ss_pred CCCCeECCCCC---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC--HHHHHHHHHcCC--C
Confidence 99998876543 2345679999999999998888999999999999999999999997542 222222222111 1
Q ss_pred ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 043053 940 VLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKE 986 (1058)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~ 986 (1058)
..+.......+. .+.+++.+||..||++|||+.|++++-.-
T Consensus 221 ~~~~~~~~~~s~------~~~~li~~~L~~dp~~Rpt~~e~l~hp~~ 261 (321)
T 1tki_A 221 TFDEEAFKEISI------EAMDFVDRLLVKERKSRMTASEALQHPWL 261 (321)
T ss_dssp CCCHHHHTTSCH------HHHHHHHTTSCSSGGGSCCHHHHHHSHHH
T ss_pred CCChhhhccCCH------HHHHHHHHHcCCChhHCcCHHHHhcChhh
Confidence 111111111121 34458889999999999999999986553
No 79
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=4.1e-39 Score=358.43 Aligned_cols=274 Identities=32% Similarity=0.531 Sum_probs=212.2
Q ss_pred HHHhhcccc------ceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCccc
Q 043053 701 QVLKCLVDA------NVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIV 774 (1058)
Q Consensus 701 ~~~~~~~~~------~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 774 (1058)
.+.+.|... +.||+|+||.||+|.. +++.||||++..... ...+...+.+.+|+.++++++||||+
T Consensus 22 ~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~-------~~~~~~~~~~~~E~~~l~~l~h~~i~ 93 (307)
T 2nru_A 22 NVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVD-------ITTEELKQQFDQEIKVMAKCQHENLV 93 (307)
T ss_dssp HHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTT-------SCTTTHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccC-------cchHHHHHHHHHHHHHHHhcCCCCeE
Confidence 344455544 8999999999999976 488999999853311 12344568899999999999999999
Q ss_pred ceeeEEEcCCCceEEEEecCCCChhhhhhhcC-CCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCC
Q 043053 775 RFLGCCWNRNNRLLMYDYMPNGSLGSLLHERT-GNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEF 853 (1058)
Q Consensus 775 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~ 853 (1058)
++++++.+.+..++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++
T Consensus 94 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~ 170 (307)
T 2nru_A 94 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAF 170 (307)
T ss_dssp CEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTC
T ss_pred EEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcCCC
Confidence 99999999999999999999999999997532 45689999999999999999999999 999999999999999999
Q ss_pred CeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCh--hHHHH
Q 043053 854 EPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGS--HVVDW 931 (1058)
Q Consensus 854 ~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~--~~~~~ 931 (1058)
.+||+|||+++...............||+.|+|||++.+ .++.++||||||+++|+|++|..||........ .....
T Consensus 171 ~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 249 (307)
T 2nru_A 171 TAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 249 (307)
T ss_dssp CEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHH
T ss_pred cEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHH
Confidence 999999999987655433333445679999999998765 478899999999999999999999976533221 11111
Q ss_pred HHhhc-C-ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhh
Q 043053 932 VRQKK-G-IQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKH 989 (1058)
Q Consensus 932 ~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~ 989 (1058)
..... . ....++.....+... ...+..++..||+.||.+|||+++++++|+++..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 250 IEDEEKTIEDYIDKKMNDADSTS---VEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHTTSCCHHHHSCSSCSCCCHHH---HHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred hhhhhhhhhhhccccccccchHH---HHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 11111 0 011222222222222 2334458999999999999999999999998753
No 80
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=8.3e-40 Score=366.87 Aligned_cols=261 Identities=27% Similarity=0.394 Sum_probs=204.4
Q ss_pred hhccccceeccccceEEEEEE-ecCCcE----EEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceee
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNGEV----IAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLG 778 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~----vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~ 778 (1058)
++|...+.||+|+||+||+|. ..+++. ||+|.+... ......+.+.+|+.++++++||||+++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~----------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 82 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK----------SGRQSFQAVTDHMLAIGSLDHAHIVRLLG 82 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCT----------TSCSCBCSCCHHHHHHHTCCCTTBCCEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccc----------ccHHHHHHHHHHHHHHhcCCCCCcCeEEE
Confidence 578899999999999999995 445554 777766322 12223456788999999999999999999
Q ss_pred EEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeee
Q 043053 779 CCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIA 858 (1058)
Q Consensus 779 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~ 858 (1058)
++. ++..++||||+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+
T Consensus 83 ~~~-~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~ 157 (325)
T 3kex_A 83 LCP-GSSLQLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVA 157 (325)
T ss_dssp EEC-BSSEEEEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEEC
T ss_pred EEc-CCccEEEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEEC
Confidence 886 56689999999999999999764 35789999999999999999999999 99999999999999999999999
Q ss_pred ccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcC
Q 043053 859 DFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKG 937 (1058)
Q Consensus 859 DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1058)
|||+++...............||..|+|||++.+..++.++|||||||++|||++ |+.||..... ......+.....
T Consensus 158 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~~ 235 (325)
T 3kex_A 158 DFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL--AEVPDLLEKGER 235 (325)
T ss_dssp SCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT--THHHHHHHTTCB
T ss_pred CCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH--HHHHHHHHcCCC
Confidence 9999987765443344456678889999999998999999999999999999999 9999976532 233333332211
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043053 938 IQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHERE 992 (1058)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~~ 992 (1058)
. ..+. ..+.. +..++..||+.||++|||+++++++|+.+.....
T Consensus 236 ~--~~~~---~~~~~------~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~~ 279 (325)
T 3kex_A 236 L--AQPQ---ICTID------VYMVMVKCWMIDENIRPTFKELANEFTRMARDPP 279 (325)
T ss_dssp C--CCCT---TBCTT------TTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSHH
T ss_pred C--CCCC---cCcHH------HHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 1 1111 11111 2347778999999999999999999998866543
No 81
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.8e-39 Score=370.20 Aligned_cols=261 Identities=26% Similarity=0.385 Sum_probs=198.2
Q ss_pred hhccccceeccccceEEEEEEec----CCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 704 KCLVDANVIGKGCSGVVYRADMD----NGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
++|.+.+.||+|+||.||+|... ++..||||++... ......++|.+|+.++++++||||++++++
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~----------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 114 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG----------YTEKQRRDFLGEASIMGQFDHPNIIRLEGV 114 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTT----------CCHHHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCc----------cCHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 57899999999999999999654 5778999998532 233456789999999999999999999999
Q ss_pred EEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeec
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIAD 859 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~D 859 (1058)
+.+.+..++||||+++|+|.++++.. ...+++..++.++.||++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 115 ~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~D 190 (373)
T 2qol_A 115 VTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSD 190 (373)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECC
T ss_pred EeeCCceEEEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECc
Confidence 99999999999999999999999864 45789999999999999999999999 999999999999999999999999
Q ss_pred cccceeccCCCc-ccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcC
Q 043053 860 FGLAKLVDDGDF-ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKG 937 (1058)
Q Consensus 860 fGl~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1058)
||+++....... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||.... .......+....
T Consensus 191 fg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~--~~~~~~~i~~~~- 267 (373)
T 2qol_A 191 FGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS--NQDVIKAVDEGY- 267 (373)
T ss_dssp C----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC--HHHHHHHHHTTE-
T ss_pred CccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCC-
Confidence 999987654321 112223346788999999999999999999999999999998 999997542 222222222211
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043053 938 IQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHER 991 (1058)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~ 991 (1058)
........+. .+..++..||+.||++||++.++++.|+.+....
T Consensus 268 ----~~~~~~~~~~------~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 268 ----RLPPPMDCPA------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp ----ECCCCTTCBH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred ----CCCCCccccH------HHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 1111111222 2344788899999999999999999999886543
No 82
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.1e-39 Score=367.12 Aligned_cols=262 Identities=20% Similarity=0.277 Sum_probs=206.8
Q ss_pred HHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEE
Q 043053 702 VLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCC 780 (1058)
Q Consensus 702 ~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 780 (1058)
+.++|.+.+.||+|+||+||+| +..+|+.||||++....... ......+.+.+|++++++++||||+++++++
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~ 95 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTS------SPGLSTEDLKREASICHMLKHPHIVELLETY 95 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHT------SSSCCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccc------cccchHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 3478999999999999999999 55679999999985432211 1122357899999999999999999999999
Q ss_pred EcCCCceEEEEecCCCChhhhhhhc--CCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCC---e
Q 043053 781 WNRNNRLLMYDYMPNGSLGSLLHER--TGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFE---P 855 (1058)
Q Consensus 781 ~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~---~ 855 (1058)
.+++..|+||||++||+|.+++... ....+++..+..++.||++||+|||+. +|+||||||+||+++.++. +
T Consensus 96 ~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~v 172 (351)
T 3c0i_A 96 SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPV 172 (351)
T ss_dssp EETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCE
T ss_pred EeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcE
Confidence 9999999999999999999888653 234689999999999999999999999 9999999999999987654 9
Q ss_pred eeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhh
Q 043053 856 YIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQK 935 (1058)
Q Consensus 856 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 935 (1058)
||+|||+++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||... .......+...
T Consensus 173 kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~---~~~~~~~i~~~ 247 (351)
T 3c0i_A 173 KLGGFGVAIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT---KERLFEGIIKG 247 (351)
T ss_dssp EECCCTTCEECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS---HHHHHHHHHHT
T ss_pred EEecCcceeEecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc---HHHHHHHHHcC
Confidence 999999998775533 2234567999999999999999999999999999999999999999753 11221111111
Q ss_pred cCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 043053 936 KGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLK 985 (1058)
Q Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~ 985 (1058)
. ....+......+. .+.+++.+||+.||++|||+.+++++-.
T Consensus 248 ~--~~~~~~~~~~~s~------~~~~li~~~L~~dP~~R~s~~e~l~hp~ 289 (351)
T 3c0i_A 248 K--YKMNPRQWSHISE------SAKDLVRRMLMLDPAERITVYEALNHPW 289 (351)
T ss_dssp C--CCCCHHHHTTSCH------HHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred C--CCCCccccccCCH------HHHHHHHHHCCCChhHCcCHHHHhcChh
Confidence 1 1111111111122 2345788899999999999999998543
No 83
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.1e-39 Score=368.09 Aligned_cols=258 Identities=21% Similarity=0.276 Sum_probs=206.6
Q ss_pred HHHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 701 QVLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 701 ~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
.+.++|.+.+.||+|+||.||+| +..+|+.||||++.... ......+.+.+|++++++++||||++++++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~---------~~~~~~~~~~~E~~il~~l~hpnIv~~~~~ 96 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK---------LSARDFQKLEREARICRKLQHPNIVRLHDS 96 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT---------CCHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEccc---------CCHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 45688999999999999999999 55679999999985331 122345788999999999999999999999
Q ss_pred EEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCC---Cee
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEF---EPY 856 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~---~~k 856 (1058)
+.+++..|+||||+++|+|.+++... ..+++..+..++.||++||+|||+. +|+||||||+||+++.++ .+|
T Consensus 97 ~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~k 171 (362)
T 2bdw_A 97 IQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVK 171 (362)
T ss_dssp EECSSEEEEEECCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEE
T ss_pred EEeCCEEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEE
Confidence 99999999999999999999999763 5689999999999999999999999 999999999999998654 599
Q ss_pred eeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhc
Q 043053 857 IADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKK 936 (1058)
Q Consensus 857 l~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 936 (1058)
|+|||++....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||... +.......+....
T Consensus 172 l~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~--~~~~~~~~i~~~~ 246 (362)
T 2bdw_A 172 LADFGLAIEVNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--DQHRLYAQIKAGA 246 (362)
T ss_dssp ECCCTTCBCCTTCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTC
T ss_pred EeecCcceEecCCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCC
Confidence 99999998765432 234567999999999999989999999999999999999999999753 2222222222211
Q ss_pred CccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 043053 937 GIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLK 985 (1058)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~ 985 (1058)
. ..........+. .+.+++.+||+.||++|||+++++++-.
T Consensus 247 -~-~~~~~~~~~~~~------~~~~li~~~L~~dP~~R~t~~e~l~hp~ 287 (362)
T 2bdw_A 247 -Y-DYPSPEWDTVTP------EAKSLIDSMLTVNPKKRITADQALKVPW 287 (362)
T ss_dssp -C-CCCTTGGGGSCH------HHHHHHHHHSCSSGGGSCCHHHHTTSHH
T ss_pred -C-CCCcccccCCCH------HHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence 1 111111111121 2345788899999999999999987643
No 84
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.2e-40 Score=366.80 Aligned_cols=252 Identities=23% Similarity=0.314 Sum_probs=203.4
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
.+|.+.+.||+|+||+||+| +..+++.||||++..... ......+.+.+|+.+++.++||||+++++++.+
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--------~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 80 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLL--------KKSDMHMRVEREISYLKLLRHPHIIKLYDVITT 80 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH--------HHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHc--------cchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe
Confidence 57999999999999999999 457899999999854322 122234678999999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
++..++||||+ +|+|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~~lv~E~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~ 154 (336)
T 3h4j_B 81 PTDIVMVIEYA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGL 154 (336)
T ss_dssp SSEEEEEECCC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSC
T ss_pred CCEEEEEEECC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEecc
Confidence 99999999999 78999998764 5699999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcccc
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKI-TEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVL 941 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1058)
+.....+. .....+||+.|+|||++.+..+ ++++||||+||++|+|++|+.||........ .......
T Consensus 155 s~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~--------~~~i~~~ 223 (336)
T 3h4j_B 155 SNIMTDGN---FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL--------FKKVNSC 223 (336)
T ss_dssp TBTTTTSB---TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC--------BCCCCSS
T ss_pred ceeccCCc---ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH--------HHHHHcC
Confidence 98765433 2345679999999999988776 6899999999999999999999975422110 0000000
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 043053 942 DPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKE 986 (1058)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~ 986 (1058)
........+. .+.+++.+||+.||.+|||++|++++-..
T Consensus 224 ~~~~p~~~s~------~~~~li~~~L~~dP~~Rpt~~eil~hp~~ 262 (336)
T 3h4j_B 224 VYVMPDFLSP------GAQSLIRRMIVADPMQRITIQEIRRDPWF 262 (336)
T ss_dssp CCCCCTTSCH------HHHHHHHTTSCSSGGGSCCHHHHTTCHHH
T ss_pred CCCCcccCCH------HHHHHHHHHcCCChhHCcCHHHHHhChhh
Confidence 1111111122 23457889999999999999999986543
No 85
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.4e-39 Score=358.73 Aligned_cols=263 Identities=19% Similarity=0.218 Sum_probs=208.9
Q ss_pred hhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccceeeEEE
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVRFLGCCW 781 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 781 (1058)
++|.+.+.||+|+||.||+|. ..+|+.||||++... ...+.+.+|+.+++++ +|++++++++++.
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------------~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~ 76 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR-------------SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQ 76 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC-------------TTSCCHHHHHHHHHHTTTCTTCCCEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC-------------CccHHHHHHHHHHHHHhcCCCCCeEEeecC
Confidence 579999999999999999994 578999999987422 1234578999999999 7999999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCC-----ee
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFE-----PY 856 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~-----~k 856 (1058)
+....++||||+ +|+|.++++.. ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++. +|
T Consensus 77 ~~~~~~lv~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~k 151 (298)
T 1csn_A 77 EGLHNVLVIDLL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIY 151 (298)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEE
T ss_pred CCceeEEEEEec-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEE
Confidence 999999999999 99999999864 45699999999999999999999999 9999999999999988776 99
Q ss_pred eeccccceeccCCCcc-----cccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCh-hHHH
Q 043053 857 IADFGLAKLVDDGDFA-----RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGS-HVVD 930 (1058)
Q Consensus 857 l~DfGl~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~-~~~~ 930 (1058)
|+|||+++........ .......||+.|+|||++.+..++.++||||||+++|||++|+.||........ ....
T Consensus 152 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 231 (298)
T 1csn_A 152 VVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYE 231 (298)
T ss_dssp ECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHH
T ss_pred EEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHH
Confidence 9999999877654321 123456799999999999999999999999999999999999999986543222 1111
Q ss_pred HHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043053 931 WVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHER 991 (1058)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~ 991 (1058)
.+..... ....+......+. .+..++..||+.||++|||++++++.|+++..+.
T Consensus 232 ~~~~~~~-~~~~~~~~~~~~~------~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~ 285 (298)
T 1csn_A 232 RIGEKKQ-STPLRELCAGFPE------EFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 285 (298)
T ss_dssp HHHHHHH-HSCHHHHTTTSCH------HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHhhcc-CccHHHHHhhCcH------HHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence 1111110 0000111112222 2334777899999999999999999999886543
No 86
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.3e-39 Score=371.49 Aligned_cols=257 Identities=20% Similarity=0.247 Sum_probs=200.8
Q ss_pred HhhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccceeeEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVRFLGCC 780 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 780 (1058)
.++|.+.++||+|+||+||+|. ..+++.||||++.+... ......+.+.+|..++.++ +||||+++++++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~--------~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~ 122 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELV--------NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF 122 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGT--------C----CCHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhc--------cCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEE
Confidence 3689999999999999999994 55788999999865422 1223346788999999887 799999999999
Q ss_pred EcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecc
Q 043053 781 WNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADF 860 (1058)
Q Consensus 781 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~Df 860 (1058)
.+++..|+||||++||+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 123 ~~~~~~~lV~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DF 197 (396)
T 4dc2_A 123 QTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDY 197 (396)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred EECCEEEEEEEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeec
Confidence 9999999999999999999999864 5799999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCC----hhHHHHHHhhc
Q 043053 861 GLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDG----SHVVDWVRQKK 936 (1058)
Q Consensus 861 Gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~----~~~~~~~~~~~ 936 (1058)
|+++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ...........
T Consensus 198 Gla~~~~~~~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~ 275 (396)
T 4dc2_A 198 GMCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL 275 (396)
T ss_dssp TTCBCCCCTT--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHH
T ss_pred ceeeecccCC--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHh
Confidence 9998533222 33456789999999999999999999999999999999999999996432111 00111111111
Q ss_pred CccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCH------HHHHHH
Q 043053 937 GIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTM------KDVAAM 983 (1058)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~------~~v~~~ 983 (1058)
.. ........+. .+.+++..||+.||++||++ +|++++
T Consensus 276 ~~---~~~~p~~~s~------~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 276 EK---QIRIPRSLSV------KAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp HC---CCCCCTTSCH------HHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred cc---ccCCCCcCCH------HHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 00 1111112222 23457788999999999996 566554
No 87
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=6e-39 Score=357.22 Aligned_cols=266 Identities=23% Similarity=0.320 Sum_probs=203.3
Q ss_pred HHHhhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEE
Q 043053 701 QVLKCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCC 780 (1058)
Q Consensus 701 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 780 (1058)
.+.++|.+.+.||+|+||+||+|...+|+.||||++.... ......+.+.+|++++++++||||+++++++
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 88 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDA---------EDEGIPSTAIREISLLKELHHPNIVSLIDVI 88 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC---------------CHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred chHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEeccc---------ccchhhHHHHHHHHHHHHcCCCCEeeeeeEE
Confidence 3457899999999999999999987889999999985431 2334467889999999999999999999999
Q ss_pred EcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecc
Q 043053 781 WNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADF 860 (1058)
Q Consensus 781 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~Df 860 (1058)
.++...++||||+++ +|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Df 163 (311)
T 3niz_A 89 HSERCLTLVFEFMEK-DLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADF 163 (311)
T ss_dssp CCSSCEEEEEECCSE-EHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred ccCCEEEEEEcCCCC-CHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccC
Confidence 999999999999985 888888764 45689999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccCCCcccccccccCcCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcc
Q 043053 861 GLAKLVDDGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQ 939 (1058)
Q Consensus 861 Gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1058)
|+++...... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .............
T Consensus 164 g~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~ 240 (311)
T 3niz_A 164 GLARAFGIPV--RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPN 240 (311)
T ss_dssp TTCEETTSCC--C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCC
T ss_pred cCceecCCCc--ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCC
Confidence 9998765432 23345678999999999876 568999999999999999999999997654332 2222221111000
Q ss_pred cc-CC-----------CCCCCCchhHHH-----HHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 940 VL-DP-----------SLLSRPESEIDE-----MLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 940 ~~-~~-----------~~~~~~~~~~~~-----~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
.. .+ ............ ..++.+++.+||+.||++|||++|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 241 PREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp TTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00 00 000000000000 0134568889999999999999999874
No 88
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.5e-39 Score=376.19 Aligned_cols=260 Identities=23% Similarity=0.252 Sum_probs=203.9
Q ss_pred hhccccceeccccceEEEEEEe-cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRADM-DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|...++||+|+||+||+|.. .+++.||||++.+.... .....+.+.+|+.++..++||||+++++++.+
T Consensus 74 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~--------~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML--------KRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH--------HTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhh--------hHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 6899999999999999999954 56899999998543221 11223458899999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
++..|+||||++||+|.+++... ...+++..++.++.|++.||+|||+. +||||||||+|||++.++.+||+|||+
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGl 221 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGS 221 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhh
Confidence 99999999999999999999863 46799999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcC
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGY-----MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKG 937 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 937 (1058)
++....... ......+||+.|+|||++. ...++.++||||+||++|||++|+.||..... ......+.....
T Consensus 222 a~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~--~~~~~~i~~~~~ 298 (437)
T 4aw2_A 222 CLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL--VETYGKIMNHKE 298 (437)
T ss_dssp CEECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHTHHH
T ss_pred hhhcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh--hHHHHhhhhccc
Confidence 987654332 2334567999999999986 45689999999999999999999999975421 111111111110
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHHH
Q 043053 938 IQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDE--RPTMKDVAAMLK 985 (1058)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~--RPt~~~v~~~l~ 985 (1058)
....|......+. .+.+++.+|+..+|++ ||+++|++++-.
T Consensus 299 -~~~~p~~~~~~s~------~~~dLi~~lL~~~~~r~~r~~~~eil~Hpf 341 (437)
T 4aw2_A 299 -RFQFPTQVTDVSE------NAKDLIRRLICSREHRLGQNGIEDFKKHPF 341 (437)
T ss_dssp -HCCCCSSCCCSCH------HHHHHHHTTSSCGGGCTTTTTTHHHHTSGG
T ss_pred -cccCCcccccCCH------HHHHHHHHHhcccccccCCCCHHHHhCCCc
Confidence 0111111112222 2344777889888888 999999988643
No 89
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.5e-39 Score=366.40 Aligned_cols=265 Identities=25% Similarity=0.379 Sum_probs=211.4
Q ss_pred HhhccccceeccccceEEEEEEec-CC-----cEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccc
Q 043053 703 LKCLVDANVIGKGCSGVVYRADMD-NG-----EVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVR 775 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~-----~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 775 (1058)
.++|...+.||+|+||.||+|... ++ ..||||++... ......+.+.+|+.+++++ +||||++
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~~E~~~l~~l~~h~~iv~ 114 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST----------AHADEKEALMSELKIMSHLGQHENIVN 114 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTT----------CCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccc----------cChHHHHHHHHHHHHHHhhcCCCCeee
Confidence 367899999999999999999543 33 47999998533 2233467899999999999 8999999
Q ss_pred eeeEEEcCCCceEEEEecCCCChhhhhhhcC------------CCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCC
Q 043053 776 FLGCCWNRNNRLLMYDYMPNGSLGSLLHERT------------GNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIK 843 (1058)
Q Consensus 776 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik 843 (1058)
+++++..++..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+|||||
T Consensus 115 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 191 (333)
T 2i1m_A 115 LLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVA 191 (333)
T ss_dssp EEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCS
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcc
Confidence 9999999999999999999999999997532 34679999999999999999999999 99999999
Q ss_pred CCcEEEcCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCC
Q 043053 844 ANNILIGLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTI 922 (1058)
Q Consensus 844 p~Nill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~ 922 (1058)
|+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 192 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 271 (333)
T 2i1m_A 192 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL 271 (333)
T ss_dssp GGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred cceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccc
Confidence 9999999999999999999987654433233345567889999999998899999999999999999999 999997543
Q ss_pred CCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043053 923 PDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHERE 992 (1058)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~~ 992 (1058)
.. ............ .......+. .+..++..||+.||++|||++++++.|+++..+..
T Consensus 272 ~~-~~~~~~~~~~~~-----~~~~~~~~~------~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 329 (333)
T 2i1m_A 272 VN-SKFYKLVKDGYQ-----MAQPAFAPK------NIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR 329 (333)
T ss_dssp SS-HHHHHHHHHTCC-----CCCCTTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred hh-HHHHHHHhcCCC-----CCCCCCCCH------HHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhh
Confidence 22 222222222211 111111222 23447888999999999999999999998866543
No 90
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-39 Score=366.41 Aligned_cols=264 Identities=24% Similarity=0.338 Sum_probs=209.1
Q ss_pred HhhccccceeccccceEEEEEEe------cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccc
Q 043053 703 LKCLVDANVIGKGCSGVVYRADM------DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVR 775 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 775 (1058)
.++|.+.+.||+|+||.||+|.. .+++.||||++... ......+.+.+|+.+++++ +||||++
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~~E~~~l~~l~~hp~iv~ 113 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEK----------ADSSEREALMSELKMMTQLGSHENIVN 113 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC----------------CHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccc----------cCHHHHHHHHHHHHHHHhhcCCCCeee
Confidence 37899999999999999999964 34678999998533 1233457899999999999 8999999
Q ss_pred eeeEEEcCCCceEEEEecCCCChhhhhhhcCC---------------------CCCCHHHHHHHHHHHHHHhhcccccCC
Q 043053 776 FLGCCWNRNNRLLMYDYMPNGSLGSLLHERTG---------------------NALEWELRYQILLGAAQGLAYLHHDCV 834 (1058)
Q Consensus 776 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~ 834 (1058)
+++++...+..++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+.
T Consensus 114 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-- 191 (344)
T 1rjb_A 114 LLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK-- 191 (344)
T ss_dssp EEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred EEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 99999999999999999999999999986432 2479999999999999999999999
Q ss_pred CCeEeCCCCCCcEEEcCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-
Q 043053 835 PPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT- 913 (1058)
Q Consensus 835 ~~ivHrDikp~Nill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt- 913 (1058)
+|+||||||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++
T Consensus 192 -~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~ 270 (344)
T 1rjb_A 192 -SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSL 270 (344)
T ss_dssp -TEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTT
T ss_pred -CcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcC
Confidence 999999999999999999999999999987655433333445567889999999998899999999999999999998
Q ss_pred CCCCCCCCCCCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043053 914 GKQPIDPTIPDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHER 991 (1058)
Q Consensus 914 g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~ 991 (1058)
|..||..... .......+.... .+......+. .+..++..||+.||++|||+.+++++|+.+....
T Consensus 271 g~~p~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 271 GVNPYPGIPV-DANFYKLIQNGF-----KMDQPFYATE------EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp SCCSSTTCCC-SHHHHHHHHTTC-----CCCCCTTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred CCCCcccCCc-HHHHHHHHhcCC-----CCCCCCCCCH------HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 9999976532 223333222221 1111111222 2334778899999999999999999999876543
No 91
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2.7e-39 Score=357.71 Aligned_cols=265 Identities=28% Similarity=0.403 Sum_probs=202.3
Q ss_pred hhccccceeccccceEEEEEEe-----cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceee
Q 043053 704 KCLVDANVIGKGCSGVVYRADM-----DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLG 778 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~ 778 (1058)
++|++.+.||+|+||+||+|.+ .+++.||||++... .....+.+.+|++++++++||||+++++
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-----------~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 78 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-----------TEEHLRDFEREIEILKSLQHDNIVKYKG 78 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC-----------CHHHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC-----------CHHHHHHHHHHHHHHHhCCCCCEeeEEE
Confidence 6899999999999999999963 46899999998522 3344578999999999999999999999
Q ss_pred EEEc--CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCee
Q 043053 779 CCWN--RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPY 856 (1058)
Q Consensus 779 ~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~k 856 (1058)
++.. ....++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 79 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~k 154 (295)
T 3ugc_A 79 VCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVK 154 (295)
T ss_dssp EECHHHHTSCEEEEECCTTCBHHHHHHHC-GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEE
T ss_pred EEecCCCCceEEEEEeCCCCCHHHHHHhc-ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEE
Confidence 9865 35589999999999999999864 34689999999999999999999999 999999999999999999999
Q ss_pred eeccccceeccCCCc-ccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCC----------CCC
Q 043053 857 IADFGLAKLVDDGDF-ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTI----------PDG 925 (1058)
Q Consensus 857 l~DfGl~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~----------~~~ 925 (1058)
|+|||+++....... ........++..|+|||++.+..++.++||||||+++|||++|..||.... +..
T Consensus 155 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~ 234 (295)
T 3ugc_A 155 IGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 234 (295)
T ss_dssp ECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCT
T ss_pred EccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCcccc
Confidence 999999987654321 122334457788999999999999999999999999999999999986421 011
Q ss_pred hhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 926 SHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
............ ...........+ .+ +..++..||+.||++|||++|+++.|+++...
T Consensus 235 ~~~~~~~~~~~~-~~~~~~~~~~~~---~~---l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 235 QMIVFHLIELLK-NNGRLPRPDGCP---DE---IYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHHHHHHHHHHH-TTCCCCCCTTCC---HH---HHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred chhHHHHHHHHh-ccCcCCCCcCcC---HH---HHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 111101111000 000111111222 22 33478889999999999999999999988654
No 92
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=8e-39 Score=374.57 Aligned_cols=252 Identities=27% Similarity=0.390 Sum_probs=206.3
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
++|...+.||+|+||.||+|... |+.||||++... ...+.|.+|++++++++||||+++++++...
T Consensus 193 ~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 258 (450)
T 1k9a_A 193 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND-------------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258 (450)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSC-------------TTSHHHHHHHHHHHTCCCTTBCCEEEEEECT
T ss_pred HHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCc-------------hHHHHHHHHHHHHHhccCCCEEEEEEEEEcC
Confidence 57888999999999999999876 789999998422 2357899999999999999999999998776
Q ss_pred C-CceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 784 N-NRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 784 ~-~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
. ..++||||+++|+|.++++......+++..++.++.||++||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 259 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~ 335 (450)
T 1k9a_A 259 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGL 335 (450)
T ss_dssp TSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCC
Confidence 5 689999999999999999876555689999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcCcccc
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKGIQVL 941 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1058)
++..... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .....+....
T Consensus 336 a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~~----- 403 (450)
T 1k9a_A 336 TKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKGY----- 403 (450)
T ss_dssp CEECC-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--THHHHHHTTC-----
T ss_pred ccccccc-----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC-----
Confidence 9864332 123357889999999999999999999999999999998 99999765332 2333332221
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 942 DPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
........+. + +.+++..||+.||++|||+.++++.|+++...
T Consensus 404 ~~~~p~~~~~---~---l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 404 KMDAPDGCPP---A---VYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CCCCCTTCCH---H---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCCCcCCH---H---HHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 1111122222 2 33477889999999999999999999988654
No 93
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3.1e-39 Score=356.58 Aligned_cols=261 Identities=22% Similarity=0.323 Sum_probs=200.9
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|...+.||+|+||+||+| +..+++.||||++.... ......+.+.+|+.++++++||||+++++++.+
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 72 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD---------DDEGVPSSALREICLLKELKHKNIVRLHDVLHS 72 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSC---------SSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccC---------CcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe
Confidence 57899999999999999999 55679999999985331 233456788999999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
++..++||||+++ ++.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 73 ~~~~~lv~e~~~~-~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~ 147 (292)
T 3o0g_A 73 DKKLTLVFEFCDQ-DLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGL 147 (292)
T ss_dssp TTEEEEEEECCSE-EHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEecCCC-CHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 9999999999976 666666543 46799999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCC-CCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcc--
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMK-ITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQ-- 939 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~-- 939 (1058)
++...... .......||+.|+|||++.+.. ++.++||||+||++|||++|..||..............+......
T Consensus 148 ~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~ 225 (292)
T 3o0g_A 148 ARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEE 225 (292)
T ss_dssp CEECCSCC--SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred ceecCCcc--ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChh
Confidence 98765432 3334567899999999987765 799999999999999999999887543222222222222111000
Q ss_pred c---------cCC--------CCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 940 V---------LDP--------SLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 940 ~---------~~~--------~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
. ..+ ......+.... .+.+++..||+.||++|||++|++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 226 QWPSMTKLPDYKPYPMYPATTSLVNVVPKLNA---TGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp TCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCH---HHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhhhcccccccccccccCCcchhhcccccCh---HHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 000 00000001111 23457888999999999999999874
No 94
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=5.2e-39 Score=352.64 Aligned_cols=259 Identities=24% Similarity=0.358 Sum_probs=197.1
Q ss_pred hhccccceeccccceEEEEEEec----CCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 704 KCLVDANVIGKGCSGVVYRADMD----NGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
++|.+.+.||+|+||.||+|... .+..||||++... ......+.+.+|+.++++++||||++++++
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~----------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 84 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC----------TSDSVREKFLQEALTMRQFDHPHIVKLIGV 84 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT----------TSHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc----------CCHHHHHHHHHHHHHHHhCCCCccceEEEE
Confidence 68999999999999999999543 3557999987532 233456789999999999999999999999
Q ss_pred EEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeec
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIAD 859 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~D 859 (1058)
+. ++..++||||+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 85 ~~-~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 159 (281)
T 1mp8_A 85 IT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGD 159 (281)
T ss_dssp EC-SSSCEEEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC
T ss_pred Ec-cCccEEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECc
Confidence 84 56789999999999999999864 45789999999999999999999999 999999999999999999999999
Q ss_pred cccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcCc
Q 043053 860 FGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKGI 938 (1058)
Q Consensus 860 fGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1058)
||+++....... .......+|+.|+|||++.+..++.++||||+|+++|||++ |..||..... ......+.....
T Consensus 160 fg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~--~~~~~~i~~~~~- 235 (281)
T 1mp8_A 160 FGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVIGRIENGER- 235 (281)
T ss_dssp --------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHTTCC-
T ss_pred cccccccCcccc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH--HHHHHHHHcCCC-
Confidence 999987654332 22234457889999999998899999999999999999997 9999975432 233333322211
Q ss_pred cccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043053 939 QVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHER 991 (1058)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~ 991 (1058)
.......+.. +..++..||+.||++|||+.++++.|+++..+.
T Consensus 236 ----~~~~~~~~~~------l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 236 ----LPMPPNCPPT------LYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp ----CCCCTTCCHH------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----CCCCCCCCHH------HHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 1111222222 334778899999999999999999999886543
No 95
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.9e-39 Score=382.55 Aligned_cols=259 Identities=22% Similarity=0.350 Sum_probs=212.7
Q ss_pred hhccccceeccccceEEEEEEec-CCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRADMD-NGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|...+.||+|+||.||+|... ++..||||++... ....++|.+|++++++++||||+++++++.+
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~------------~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 287 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED------------TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS------------SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc------------ccchHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 56888999999999999999554 5899999998532 2236789999999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
+...++||||+++|+|.++++......+++..++.++.||++||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 288 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~ 364 (495)
T 1opk_A 288 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGL 364 (495)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTC
T ss_pred CCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeeccc
Confidence 99999999999999999999876567799999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcCcccc
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKGIQVL 941 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1058)
++....... .......+++.|+|||++.+..++.++|||||||++|||++ |..||.... .......+.....
T Consensus 365 a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~--~~~~~~~~~~~~~---- 437 (495)
T 1opk_A 365 SRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYR---- 437 (495)
T ss_dssp EECCTTCCE-ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHHHHHTTCC----
T ss_pred ceeccCCce-eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCCC----
Confidence 987654332 22334557789999999998889999999999999999999 999997543 2333333332211
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043053 942 DPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHER 991 (1058)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~ 991 (1058)
.......+. + +..++.+||+.||++|||++++++.|+.+....
T Consensus 438 -~~~~~~~~~---~---l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~ 480 (495)
T 1opk_A 438 -MERPEGCPE---K---VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 480 (495)
T ss_dssp -CCCCTTCCH---H---HHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSS
T ss_pred -CCCCCCCCH---H---HHHHHHHHcCcChhHCcCHHHHHHHHHHHHhcc
Confidence 111112222 2 334778899999999999999999999876543
No 96
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4.6e-39 Score=359.20 Aligned_cols=262 Identities=27% Similarity=0.392 Sum_probs=212.4
Q ss_pred hhccccceeccccceEEEEEEe------cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccce
Q 043053 704 KCLVDANVIGKGCSGVVYRADM------DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVRF 776 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~ 776 (1058)
++|...+.||+|+||.||+|.. .+++.||||++... ......+.+.+|+.+++++ +||||+++
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~~E~~~l~~l~~h~~i~~~ 92 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS----------AHLTEREALMSELKVLSYLGNHMNIVNL 92 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT----------CCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcc----------hhHHHHHHHHHHHHHHhhcccCCCeeeE
Confidence 6899999999999999999953 35788999998533 2223467899999999999 89999999
Q ss_pred eeEEEcCCCceEEEEecCCCChhhhhhhcCC----------------CCCCHHHHHHHHHHHHHHhhcccccCCCCeEeC
Q 043053 777 LGCCWNRNNRLLMYDYMPNGSLGSLLHERTG----------------NALEWELRYQILLGAAQGLAYLHHDCVPPIVHR 840 (1058)
Q Consensus 777 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHr 840 (1058)
++++.+++..++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+. +|+||
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~ 169 (313)
T 1t46_A 93 LGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHR 169 (313)
T ss_dssp EEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecC
Confidence 9999999999999999999999999986432 2589999999999999999999999 99999
Q ss_pred CCCCCcEEEcCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCC
Q 043053 841 DIKANNILIGLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPID 919 (1058)
Q Consensus 841 Dikp~Nill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~ 919 (1058)
||||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 170 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 249 (313)
T 1t46_A 170 DLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP 249 (313)
T ss_dssp CCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred CCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999987765443333445567889999999999999999999999999999999 999997
Q ss_pred CCCCCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 920 PTIPDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
.... ............ ........+. .+..++.+||+.||++|||++++++.|+++..+
T Consensus 250 ~~~~-~~~~~~~~~~~~-----~~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 250 GMPV-DSKFYKMIKEGF-----RMLSPEHAPA------EMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp TCCS-SHHHHHHHHHTC-----CCCCCTTSCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cccc-hhHHHHHhccCC-----CCCCcccCCH------HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 6532 222222222211 1111112222 234477889999999999999999999887654
No 97
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=356.68 Aligned_cols=260 Identities=20% Similarity=0.296 Sum_probs=195.2
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCC---------------CCcccchHHHHHHHHHHHcc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGC---------------SDEKSGVRDSFSAEIKTLGS 767 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~---------------~~~~~~~~~~~~~E~~~l~~ 767 (1058)
++|.+.+.||+|+||.||+| +..+++.||||++........... ........+.+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 67999999999999999999 556789999999854432111000 00112234678999999999
Q ss_pred cCCCcccceeeEEEc--CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCC
Q 043053 768 IRHKNIVRFLGCCWN--RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKAN 845 (1058)
Q Consensus 768 l~h~niv~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~ 845 (1058)
++||||+++++++.+ ....++||||+++|+|.+++.. ..+++..++.++.|+++||+|||+. +|+||||||+
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~ 166 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPS 166 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGG
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHH
Confidence 999999999999986 4567999999999999997653 5789999999999999999999999 9999999999
Q ss_pred cEEEcCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCC---CCcccchhhHHHHHHHHHhCCCCCCCCC
Q 043053 846 NILIGLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMK---ITEKSDVYSYGVVVLEVLTGKQPIDPTI 922 (1058)
Q Consensus 846 Nill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGvvl~elltg~~P~~~~~ 922 (1058)
||+++.++.+||+|||+++...... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSD--ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSS--CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HEEECCCCCEEEecCCCcccccccc--ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 9999999999999999998765433 2234567999999999987665 3778999999999999999999997431
Q ss_pred CCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 923 PDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
.......+.... .........+. .+.+++.+||+.||++|||++|++++
T Consensus 245 --~~~~~~~~~~~~----~~~~~~~~~~~------~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 245 --IMCLHSKIKSQA----LEFPDQPDIAE------DLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp --HHHHHHHHHHCC----CCCCSSSCCCH------HHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred --HHHHHHHHhccc----CCCCCccccCH------HHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 111111111111 11111111222 23447788999999999999999865
No 98
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=368.09 Aligned_cols=253 Identities=21% Similarity=0.279 Sum_probs=199.8
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccceeeEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVRFLGCC 780 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 780 (1058)
.++|.+.++||+|+||+||+| +..+|+.||||++.+... ......+.+.+|+.+++.+ +||||+++++++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~--------~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~ 93 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVI--------LQDDDVECTMTEKRILSLARNHPFLTQLFCCF 93 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH--------HHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHh--------cchhHHHHHHHHHHHHHhccCCCceeeEEEEE
Confidence 478999999999999999999 456799999999864422 1223456788999999988 699999999999
Q ss_pred EcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecc
Q 043053 781 WNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADF 860 (1058)
Q Consensus 781 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~Df 860 (1058)
.+++..|+||||++||+|.++++.. ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 94 ~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DF 168 (353)
T 3txo_A 94 QTPDRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADF 168 (353)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred EeCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccc
Confidence 9999999999999999999999864 5699999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccc
Q 043053 861 GLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQV 940 (1058)
Q Consensus 861 Gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1058)
|+++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+....
T Consensus 169 G~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--~~~~~~~i~~~~---- 240 (353)
T 3txo_A 169 GMCKEGICNG--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN--EDDLFEAILNDE---- 240 (353)
T ss_dssp TTCBCSCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHCC----
T ss_pred cceeecccCC--ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC--HHHHHHHHHcCC----
Confidence 9998543322 23446689999999999999899999999999999999999999997542 222222222211
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCH------HHHHHHH
Q 043053 941 LDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTM------KDVAAML 984 (1058)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~------~~v~~~l 984 (1058)
.......+. .+.+++..||++||++||++ ++++++-
T Consensus 241 --~~~p~~~~~------~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp 282 (353)
T 3txo_A 241 --VVYPTWLHE------DATGILKSFMTKNPTMRLGSLTQGGEHAILRHP 282 (353)
T ss_dssp --CCCCTTSCH------HHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSG
T ss_pred --CCCCCCCCH------HHHHHHHHHhhhCHHHccCCcccCCHHHHhhCC
Confidence 111111222 23457788999999999998 6777643
No 99
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=6.1e-39 Score=358.67 Aligned_cols=252 Identities=22% Similarity=0.327 Sum_probs=203.2
Q ss_pred hccccceeccccceEEEEEEe-cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 705 CLVDANVIGKGCSGVVYRADM-DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 705 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
.|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.++++++||||+++++++...
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~-----------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLR-----------KQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVG 114 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETT-----------TCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEET
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEecc-----------chhHHHHHHHHHHHHHhCCCCCcceEEEEEEEC
Confidence 367778999999999999955 47999999998432 223457889999999999999999999999999
Q ss_pred CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccccc
Q 043053 784 NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLA 863 (1058)
Q Consensus 784 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~ 863 (1058)
+..++||||+++|+|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 115 ~~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~ 188 (321)
T 2c30_A 115 EELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFC 188 (321)
T ss_dssp TEEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred CEEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeeeee
Confidence 999999999999999999874 4689999999999999999999999 9999999999999999999999999999
Q ss_pred eeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccccCC
Q 043053 864 KLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVLDP 943 (1058)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1058)
+...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||.... .......+.... .+
T Consensus 189 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~--~~~~~~~~~~~~-----~~ 259 (321)
T 2c30_A 189 AQISKDV--PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS--PVQAMKRLRDSP-----PP 259 (321)
T ss_dssp EECCSSS--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSS-----CC
T ss_pred eecccCc--cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHhcCC-----CC
Confidence 8765432 22345679999999999999999999999999999999999999997542 222222222211 11
Q ss_pred CCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 043053 944 SLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKE 986 (1058)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~ 986 (1058)
... ....... .+.+++.+||+.||++|||+++++++...
T Consensus 260 ~~~-~~~~~~~---~l~~li~~~l~~dp~~Rps~~ell~hp~~ 298 (321)
T 2c30_A 260 KLK-NSHKVSP---VLRDFLERMLVRDPQERATAQELLDHPFL 298 (321)
T ss_dssp CCT-TGGGSCH---HHHHHHHHHSCSSTTTSCCHHHHHTSGGG
T ss_pred CcC-ccccCCH---HHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence 111 0011111 23447788999999999999999886443
No 100
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=6e-39 Score=364.92 Aligned_cols=253 Identities=22% Similarity=0.288 Sum_probs=203.3
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|.+.+.||+|+||.||+| +..+++.||||++..... ......+.+.+|++++++++|||||++++++.+
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~--------~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 86 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKC--------VERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD 86 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHH--------HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhc--------ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 68999999999999999999 556789999999854422 122345788999999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
.+..|+||||++||+|.+++.. ...+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+
T Consensus 87 ~~~~~lv~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~ 161 (384)
T 4fr4_A 87 EEDMFMVVDLLLGGDLRYHLQQ--NVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNI 161 (384)
T ss_dssp SSEEEEEECCCTTEEHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccce
Confidence 9999999999999999999986 46799999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCcccccc---CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcc
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYM---MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQ 939 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1058)
++..... ......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||......... .........
T Consensus 162 a~~~~~~---~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~--~~~~~~~~~- 235 (384)
T 4fr4_A 162 AAMLPRE---TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK--EIVHTFETT- 235 (384)
T ss_dssp CEECCTT---CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHH--HHHHHHHHC-
T ss_pred eeeccCC---CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHH--HHHHHHhhc-
Confidence 9876543 23446779999999999863 45889999999999999999999999754332221 111111100
Q ss_pred ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHH
Q 043053 940 VLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPT-MKDVAAM 983 (1058)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt-~~~v~~~ 983 (1058)
........+. .+..++..||+.||++||+ ++++.++
T Consensus 236 --~~~~p~~~s~------~~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 236 --VVTYPSAWSQ------EMVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp --CCCCCTTSCH------HHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred --ccCCCCcCCH------HHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 1111112222 2345778899999999998 6766653
No 101
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=8e-39 Score=360.45 Aligned_cols=262 Identities=25% Similarity=0.379 Sum_probs=211.0
Q ss_pred hhccccceeccccceEEEEEEe--------cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCccc
Q 043053 704 KCLVDANVIGKGCSGVVYRADM--------DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIV 774 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 774 (1058)
++|.+.+.||+|+||.||+|.. .+++.||||++... ......+.+.+|+++++++ +||||+
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~~E~~~l~~l~~hp~iv 104 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD----------ATEKDLSDLVSEMEMMKMIGKHKNII 104 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTT----------CCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccC----------CcHHHHHHHHHHHHHHHHhhcCCCEe
Confidence 6899999999999999999965 35778999998532 2334467899999999999 899999
Q ss_pred ceeeEEEcCCCceEEEEecCCCChhhhhhhcCC--------------CCCCHHHHHHHHHHHHHHhhcccccCCCCeEeC
Q 043053 775 RFLGCCWNRNNRLLMYDYMPNGSLGSLLHERTG--------------NALEWELRYQILLGAAQGLAYLHHDCVPPIVHR 840 (1058)
Q Consensus 775 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHr 840 (1058)
++++++.+.+..++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+. +|+||
T Consensus 105 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~ 181 (334)
T 2pvf_A 105 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHR 181 (334)
T ss_dssp CEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred eEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCC
Confidence 999999999999999999999999999986431 3489999999999999999999999 99999
Q ss_pred CCCCCcEEEcCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCC
Q 043053 841 DIKANNILIGLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPID 919 (1058)
Q Consensus 841 Dikp~Nill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~ 919 (1058)
||||+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 182 Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 261 (334)
T 2pvf_A 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261 (334)
T ss_dssp CCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred CCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcC
Confidence 9999999999999999999999987765543334445567889999999988889999999999999999999 999997
Q ss_pred CCCCCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043053 920 PTIPDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHER 991 (1058)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~ 991 (1058)
... .......+..... .......+. .+..++..||+.||++|||+.++++.|+++....
T Consensus 262 ~~~--~~~~~~~~~~~~~-----~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 262 GIP--VEELFKLLKEGHR-----MDKPANCTN------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 320 (334)
T ss_dssp TCC--HHHHHHHHHHTCC-----CCCCTTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCC--HHHHHHHHhcCCC-----CCCCccCCH------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 542 2222222222211 111122222 2334778899999999999999999999886543
No 102
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=5.8e-39 Score=353.75 Aligned_cols=262 Identities=26% Similarity=0.377 Sum_probs=194.5
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
++|.+.+.||+|+||+||+|... ..||||++.... ......+.+.+|++++++++||||+++++++ ..
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~---------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~ 91 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTA---------PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TA 91 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSS---------CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CS
T ss_pred cceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccC---------CCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cC
Confidence 57899999999999999999764 359999885331 2344567899999999999999999999965 45
Q ss_pred CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccccc
Q 043053 784 NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLA 863 (1058)
Q Consensus 784 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~ 863 (1058)
...++||||+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 92 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 167 (289)
T 3og7_A 92 PQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLA 167 (289)
T ss_dssp SSCEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC--
T ss_pred CccEEEEEecCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceec
Confidence 6689999999999999999754 46789999999999999999999999 9999999999999999999999999999
Q ss_pred eeccCCCcccccccccCcCCccCccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccc
Q 043053 864 KLVDDGDFARSSNTVAGSYGYIAPEYGY---MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQV 940 (1058)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1058)
+...............||+.|+|||++. +..++.++||||+|+++|||++|+.||..... .......+........
T Consensus 168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~ 246 (289)
T 3og7_A 168 TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN-RDQIIEMVGRGSLSPD 246 (289)
T ss_dssp ----------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC-HHHHHHHHHHTSCCCC
T ss_pred cccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch-HHHHHHHhcccccCcc
Confidence 8655433223344567999999999876 56788899999999999999999999975432 2222222222211111
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhh
Q 043053 941 LDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKH 989 (1058)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~ 989 (1058)
........+. + +..++..||+.||++|||++++++.|+++..
T Consensus 247 -~~~~~~~~~~---~---l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 247 -LSKVRSNCPK---R---MKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp -TTSSCTTSCH---H---HHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred -hhhccccCCH---H---HHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 1111112222 2 3347788999999999999999999988754
No 103
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.9e-39 Score=362.99 Aligned_cols=255 Identities=21% Similarity=0.328 Sum_probs=198.6
Q ss_pred HHHhhccccceeccccceEEEEEEe-cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 701 QVLKCLVDANVIGKGCSGVVYRADM-DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 701 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
...++|.+.+.||+|+||.||+|.. .+|+.||||++... ..+...+.+.+|++++++++||||++++++
T Consensus 3 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----------~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 72 (332)
T 3qd2_B 3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLP----------NRELAREKVMREVKALAKLEHPGIVRYFNA 72 (332)
T ss_dssp HHHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECC----------STTTHHHHHHHHHHHHTSCCCTTBCCEEEE
T ss_pred hhhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecC----------CchhHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 3568899999999999999999955 58999999998532 233456889999999999999999999999
Q ss_pred EEcCCC---------------------------------------------------------ceEEEEecCCCChhhhh
Q 043053 780 CWNRNN---------------------------------------------------------RLLMYDYMPNGSLGSLL 802 (1058)
Q Consensus 780 ~~~~~~---------------------------------------------------------~~lv~e~~~~gsL~~~l 802 (1058)
+.+... .++||||+++|+|.+++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 152 (332)
T 3qd2_B 73 WLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWM 152 (332)
T ss_dssp EEECCSCHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHH
T ss_pred EEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHH
Confidence 865432 68999999999999999
Q ss_pred hhcC-CCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccccceeccCCCc----------
Q 043053 803 HERT-GNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDF---------- 871 (1058)
Q Consensus 803 ~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~~~~~~~~~---------- 871 (1058)
+... ....++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 153 ~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~ 229 (332)
T 3qd2_B 153 NRRCSLEDREHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 229 (332)
T ss_dssp HTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC------------
T ss_pred hcccCccchhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccc
Confidence 8643 23456777899999999999999999 999999999999999999999999999987765421
Q ss_pred ccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccccCCCCCCCCch
Q 043053 872 ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVLDPSLLSRPES 951 (1058)
Q Consensus 872 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 951 (1058)
........||+.|+|||++.+..++.++||||+||++|||++|..|+.. ........... ..+..
T Consensus 230 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-------~~~~~~~~~~~--------~~~~~ 294 (332)
T 3qd2_B 230 YATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-------RVRIITDVRNL--------KFPLL 294 (332)
T ss_dssp --CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-------HHHHHHHHHTT--------CCCHH
T ss_pred cccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-------HHHHHHHhhcc--------CCCcc
Confidence 1223456799999999999999999999999999999999998766421 11111111110 01111
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 952 EIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 952 ~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
.........+++..||+.||++|||++|++++
T Consensus 295 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 295 FTQKYPQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred cccCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 11122234568899999999999999999874
No 104
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.9e-39 Score=355.93 Aligned_cols=260 Identities=26% Similarity=0.355 Sum_probs=198.3
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
++|.+.+.||+|+||+||+|...+|+.||||++.... ......+.+.+|++++++++||||+++++++.++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~---------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 72 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEK---------EDEGIPSTTIREISILKELKHSNIVKLYDVIHTK 72 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSS---------GGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECS
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccc---------cccccchhHHHHHHHHHhcCCCCEeeeeeEEccC
Confidence 4789999999999999999977889999999985432 2233457788999999999999999999999999
Q ss_pred CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccccc
Q 043053 784 NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLA 863 (1058)
Q Consensus 784 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~ 863 (1058)
+..++||||+++ +|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 73 ~~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (288)
T 1ob3_A 73 KRLVLVFEHLDQ-DLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLA 147 (288)
T ss_dssp SCEEEEEECCSE-EHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHH
T ss_pred CeEEEEEEecCC-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccc
Confidence 999999999976 999998764 36789999999999999999999999 9999999999999999999999999999
Q ss_pred eeccCCCcccccccccCcCCccCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCc----
Q 043053 864 KLVDDGDFARSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGI---- 938 (1058)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~---- 938 (1058)
+...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ........+.....
T Consensus 148 ~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~ 224 (288)
T 1ob3_A 148 RAFGIPV--RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE-ADQLMRIFRILGTPNSKN 224 (288)
T ss_dssp HHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCTTT
T ss_pred cccCccc--cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHHCCCChhh
Confidence 8664322 223355789999999998764 589999999999999999999999975421 11111111110000
Q ss_pred -------cccCCCCCCC--------CchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 939 -------QVLDPSLLSR--------PESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 939 -------~~~~~~~~~~--------~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
...++..... ...... .+.+++.+||+.||++|||++|++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 225 WPNVTELPKYDPNFTVYEPLPWESFLKGLDE---SGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp STTGGGSTTCCTTCCCCCCCCGGGTCCSCCH---HHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred chhhhcccccccccccccCccHHHHhhhcCH---HHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0001110000 000111 23457888999999999999999874
No 105
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=6e-39 Score=353.62 Aligned_cols=263 Identities=22% Similarity=0.343 Sum_probs=215.7
Q ss_pred hhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|.+.+.||+|+||.||+|. ..++..||||++.. .....+.+.+|++++++++||||+++++++.+
T Consensus 13 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 80 (288)
T 3kfa_A 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE------------DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80 (288)
T ss_dssp GGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECS------------CSTHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cceeEEeecCCCCceeEEEeEecCCCEEEEEEecCc------------CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc
Confidence 678999999999999999994 45689999999842 22346789999999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
++..++||||+++|+|.+++.......+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~ 157 (288)
T 3kfa_A 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL 157 (288)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCG
T ss_pred CCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCcc
Confidence 99999999999999999999876667799999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcCcccc
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKGIQVL 941 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1058)
+........ .......+|+.|+|||++.+..++.++||||+|+++|+|++ |..||.... .......+.....
T Consensus 158 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~--~~~~~~~~~~~~~---- 230 (288)
T 3kfa_A 158 SRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYR---- 230 (288)
T ss_dssp GGTSCSSSS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHHHHHTTCC----
T ss_pred ceeccCCcc-ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHhccCC----
Confidence 987654332 23344567889999999998899999999999999999999 999997542 2233333322211
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhhhhhh
Q 043053 942 DPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHEREEYA 995 (1058)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~~~~~ 995 (1058)
.......+. .+.+++..||+.||++|||++++++.|+.+..+.....
T Consensus 231 -~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~~~~ 277 (288)
T 3kfa_A 231 -MERPEGCPE------KVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 277 (288)
T ss_dssp -CCCCTTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCCCCCH------HHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence 111122222 23447788999999999999999999998876654433
No 106
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=4e-39 Score=358.60 Aligned_cols=249 Identities=23% Similarity=0.298 Sum_probs=203.6
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|.+.+.||+|+||+||+| +..+|+.||+|++...... .....+.+.+|+.+++.++||||+++++++.+
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--------~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~ 77 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV--------RLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD 77 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH--------HTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh--------hhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe
Confidence 67999999999999999999 4557999999998644221 12335778899999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
....|+||||++||+|.++++. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 78 ~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~ 152 (318)
T 1fot_A 78 AQQIFMIMDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGF 152 (318)
T ss_dssp SSEEEEEECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred CCEEEEEEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCc
Confidence 9999999999999999999986 35789999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccccC
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVLD 942 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1058)
++..... ....+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+... .
T Consensus 153 a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~i~~~------~ 219 (318)
T 1fot_A 153 AKYVPDV-----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN--TMKTYEKILNA------E 219 (318)
T ss_dssp CEECSSC-----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHHHC------C
T ss_pred ceecCCc-----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--HHHHHHHHHhC------C
Confidence 9876432 235679999999999999999999999999999999999999997532 11111111111 1
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHH
Q 043053 943 PSLLSRPESEIDEMLQALGVALLCVNASPDERP-----TMKDVAAML 984 (1058)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----t~~~v~~~l 984 (1058)
.......+. .+.+++.+||..||++|| ++++++++-
T Consensus 220 ~~~p~~~~~------~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp 260 (318)
T 1fot_A 220 LRFPPFFNE------DVKDLLSRLITRDLSQRLGNLQNGTEDVKNHP 260 (318)
T ss_dssp CCCCTTSCH------HHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSG
T ss_pred CCCCCCCCH------HHHHHHHHHhccCHHHcCCCcCCCHHHHhcCc
Confidence 111112222 234477789999999999 888888753
No 107
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.4e-39 Score=379.65 Aligned_cols=257 Identities=25% Similarity=0.424 Sum_probs=209.3
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
++|...+.||+|+||+||+|...++..||||++... ....+.|.+|++++++++||||+++++++. .
T Consensus 188 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~------------~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~ 254 (454)
T 1qcf_A 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG------------SMSVEAFLAEANVMKTLQHDKLVKLHAVVT-K 254 (454)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTT------------SBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-S
T ss_pred HHeEEEEEcccCCceEEEEEEECCccEEEEEEecCC------------CccHHHHHHHHHHHhhCCCCCEeeEEEEEe-C
Confidence 678899999999999999998888899999998532 123678999999999999999999999986 6
Q ss_pred CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccccc
Q 043053 784 NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLA 863 (1058)
Q Consensus 784 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~ 863 (1058)
+..++||||+++|+|.++++......+++..++.++.||++||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 255 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a 331 (454)
T 1qcf_A 255 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLA 331 (454)
T ss_dssp SSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGG
T ss_pred CccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCc
Confidence 6789999999999999999865445688999999999999999999999 9999999999999999999999999999
Q ss_pred eeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcCccccC
Q 043053 864 KLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKGIQVLD 942 (1058)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1058)
+....... .......+|+.|+|||++....++.++|||||||++|||++ |+.||.... .......+.....
T Consensus 332 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~--~~~~~~~i~~~~~----- 403 (454)
T 1qcf_A 332 RVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--NPEVIRALERGYR----- 403 (454)
T ss_dssp GGBCCHHH-HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHHHHHHHHTCC-----
T ss_pred eEcCCCce-eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCCC-----
Confidence 87644221 22234457789999999998899999999999999999999 999997542 2233333322211
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 943 PSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
.......+ .+ +..++.+||+.||++|||++++++.|+++...
T Consensus 404 ~~~~~~~~---~~---l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 404 MPRPENCP---EE---LYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp CCCCTTSC---HH---HHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred CCCCCCCC---HH---HHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 11111122 22 34478889999999999999999999887543
No 108
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.5e-39 Score=362.52 Aligned_cols=258 Identities=22% Similarity=0.323 Sum_probs=194.5
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.++|.+.+.||+|+||.||+| +..+++.||||++.... .........+.+|++++++++||||+++++++.
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 82 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADL--------ARDPSFYLRFRREAQNAAALNHPAIVAVYDTGE 82 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTT--------TTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccc--------cCCHHHHHHHHHHHHHHHcCCCCCcceEEEeee
Confidence 468999999999999999999 45789999999985431 123345678999999999999999999999998
Q ss_pred cCCCc----eEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeee
Q 043053 782 NRNNR----LLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYI 857 (1058)
Q Consensus 782 ~~~~~----~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl 857 (1058)
..... |+||||++||+|.++++.. ..+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||
T Consensus 83 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl 157 (311)
T 3ork_A 83 AETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKV 157 (311)
T ss_dssp EEETTEEEEEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEE
T ss_pred ccCCCCcccEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEE
Confidence 76554 9999999999999999864 5789999999999999999999999 9999999999999999999999
Q ss_pred eccccceeccCCCc-ccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhc
Q 043053 858 ADFGLAKLVDDGDF-ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKK 936 (1058)
Q Consensus 858 ~DfGl~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 936 (1058)
+|||+++....... ........||+.|+|||++.+..++.++||||+|+++|||++|+.||....+ ..........
T Consensus 158 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~--~~~~~~~~~~- 234 (311)
T 3ork_A 158 MDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP--VSVAYQHVRE- 234 (311)
T ss_dssp CCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHC-
T ss_pred eeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHhcC-
Confidence 99999986654321 1223345699999999999999999999999999999999999999975422 1111111111
Q ss_pred CccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 937 GIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
............+. .+..++.+||+.||++||++.+++.+
T Consensus 235 -~~~~~~~~~~~~~~------~l~~li~~~l~~dP~~R~~~~~~l~~ 274 (311)
T 3ork_A 235 -DPIPPSARHEGLSA------DLDAVVLKALAKNPENRYQTAAEMRA 274 (311)
T ss_dssp -CCCCHHHHSTTCCH------HHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred -CCCCcccccCCCCH------HHHHHHHHHHhcCHhhChhhHHHHHH
Confidence 00000011111222 23347788999999999987766653
No 109
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=5.5e-39 Score=350.50 Aligned_cols=254 Identities=21% Similarity=0.320 Sum_probs=204.3
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
++|...+.||+|+||.||+|... ++.||||++.... ......+.+.+|+.++++++||||+++++++.++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~---------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 79 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRD---------WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP 79 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTT---------CCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccc---------cCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC
Confidence 57899999999999999999876 8999999985431 2334467899999999999999999999999877
Q ss_pred --CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCC--eEeCCCCCCcEEEcCCCCeeeec
Q 043053 784 --NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPP--IVHRDIKANNILIGLEFEPYIAD 859 (1058)
Q Consensus 784 --~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivHrDikp~Nill~~~~~~kl~D 859 (1058)
...++||||+++|+|.++++......+++..++.++.|+++||+|||+. + |+||||||+||+++.++.++++|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~ 156 (271)
T 3kmu_A 80 PAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISM 156 (271)
T ss_dssp TSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEG
T ss_pred CCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEe
Confidence 6779999999999999999876555799999999999999999999998 7 99999999999999999999999
Q ss_pred cccceeccCCCcccccccccCcCCccCccccccCCCCc---ccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhc
Q 043053 860 FGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITE---KSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKK 936 (1058)
Q Consensus 860 fGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 936 (1058)
||++..... ....||+.|+|||++.+..++. ++||||||+++|||++|+.||..... ..........
T Consensus 157 ~~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~- 226 (271)
T 3kmu_A 157 ADVKFSFQS-------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN--MEIGMKVALE- 226 (271)
T ss_dssp GGSCCTTSC-------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH--HHHHHHHHHS-
T ss_pred ccceeeecc-------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh--HHHHHHHHhc-
Confidence 988654322 2456899999999988765544 79999999999999999999975421 1111111111
Q ss_pred CccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhh
Q 043053 937 GIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKH 989 (1058)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~ 989 (1058)
...+......+.. +.+++..||+.||++|||++++++.|+++..
T Consensus 227 ---~~~~~~~~~~~~~------~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 227 ---GLRPTIPPGISPH------VSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp ---CCCCCCCTTCCHH------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred ---CCCCCCCCCCCHH------HHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1122222222322 3347778999999999999999999998764
No 110
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-39 Score=367.36 Aligned_cols=256 Identities=20% Similarity=0.262 Sum_probs=206.1
Q ss_pred HHHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 701 QVLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 701 ~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
.+.++|.+.+.||+|+||.||+| +..+|+.||+|++... .......+.+|++++++++||||++++++
T Consensus 48 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-----------~~~~~~~~~~E~~il~~l~hpnIv~~~~~ 116 (387)
T 1kob_A 48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP-----------YPLDKYTVKNEISIMNQLHHPKLINLHDA 116 (387)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----------SHHHHHHHHHHHHHHTTCCSTTBCCEEEE
T ss_pred ccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEeccc-----------chhhHHHHHHHHHHHHhCCCcCCCeEEEE
Confidence 34578999999999999999999 5567999999988432 12235678999999999999999999999
Q ss_pred EEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcC--CCCeee
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGL--EFEPYI 857 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~--~~~~kl 857 (1058)
+.+....++||||+++|+|.+++... ...+++..++.++.||+.||+|||+. +|+||||||+|||++. ++.+||
T Consensus 117 ~~~~~~~~lv~E~~~gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL 192 (387)
T 1kob_A 117 FEDKYEMVLILEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKI 192 (387)
T ss_dssp EECSSEEEEEEECCCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEE
T ss_pred EEeCCEEEEEEEcCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEE
Confidence 99999999999999999999999754 35789999999999999999999999 9999999999999974 468999
Q ss_pred eccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcC
Q 043053 858 ADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKG 937 (1058)
Q Consensus 858 ~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 937 (1058)
+|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+...
T Consensus 193 ~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~--~~~~~~~i~~~-- 265 (387)
T 1kob_A 193 IDFGLATKLNPDE---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED--DLETLQNVKRC-- 265 (387)
T ss_dssp CCCTTCEECCTTS---CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS--HHHHHHHHHHC--
T ss_pred EecccceecCCCc---ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC--HHHHHHHHHhC--
Confidence 9999998775532 2234579999999999999999999999999999999999999997542 12222222211
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 938 IQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
....++......+. .+.+++..||+.||++|||++|++++-
T Consensus 266 ~~~~~~~~~~~~s~------~~~~li~~~L~~dP~~Rpt~~ell~hp 306 (387)
T 1kob_A 266 DWEFDEDAFSSVSP------EAKDFIKNLLQKEPRKRLTVHDALEHP 306 (387)
T ss_dssp CCCCCSSTTTTSCH------HHHHHHHTTSCSSGGGSCCHHHHHTST
T ss_pred CCCCCccccccCCH------HHHHHHHHHcCCChhHCcCHHHHhhCc
Confidence 11112222222222 234578889999999999999998753
No 111
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.6e-39 Score=360.71 Aligned_cols=263 Identities=24% Similarity=0.388 Sum_probs=201.6
Q ss_pred hhccccceeccccceEEEEEE-ecCCcEE----EEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceee
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNGEVI----AVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLG 778 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~v----avK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~ 778 (1058)
++|.+.+.||+|+||+||+|. ..+++.| |+|.+... ......+.+.+|+.++++++||||+++++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~----------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~ 84 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA----------TSPKANKEILDEAYVMASVDNPHVCRLLG 84 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC----------SSCCCHHHHHHHHHHHTTCCBTTBCCCCE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc----------cCHHHHHHHHHHHHHHHhCCCCCeeEEEE
Confidence 578999999999999999995 4556554 66655322 23345688999999999999999999999
Q ss_pred EEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeee
Q 043053 779 CCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIA 858 (1058)
Q Consensus 779 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~ 858 (1058)
++..+. .++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 85 ~~~~~~-~~~v~~~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~ 159 (327)
T 3lzb_A 85 ICLTST-VQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKIT 159 (327)
T ss_dssp EEESSS-EEEEECCCSSCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEEC
T ss_pred EEecCC-ceEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEc
Confidence 998654 78999999999999999875 46789999999999999999999999 99999999999999999999999
Q ss_pred ccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcC
Q 043053 859 DFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKG 937 (1058)
Q Consensus 859 DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1058)
|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||.... .......+.....
T Consensus 160 DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~--~~~~~~~~~~~~~ 237 (327)
T 3lzb_A 160 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILEKGER 237 (327)
T ss_dssp CTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--GGGHHHHHHTTCC
T ss_pred cCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCC--HHHHHHHHHcCCC
Confidence 9999987655443333445567889999999999999999999999999999999 999997653 2233333332211
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhhhhh
Q 043053 938 IQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHEREEY 994 (1058)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~~~~ 994 (1058)
.......+. .+..++..||+.||++|||++|+++.|+++......+
T Consensus 238 -----~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~ 283 (327)
T 3lzb_A 238 -----LPQPPICTI------DVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRY 283 (327)
T ss_dssp -----CCCCTTBCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSHHHH
T ss_pred -----CCCCccCCH------HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCcCce
Confidence 111111122 2344788899999999999999999999987665443
No 112
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=5.6e-39 Score=358.60 Aligned_cols=263 Identities=23% Similarity=0.350 Sum_probs=188.5
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.++|...+.||+|+||+||+| +..+|+.||||++... ......+.+.+|++++++++||||+++++++.
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 73 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLD----------SEEGTPSTAIREISLMKELKHENIVRLYDVIH 73 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECC----------STTCSCHHHHHHHHHHTTCCBTTBCCEEEEEC
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecc----------cccccHHHHHHHHHHHHhcCCCCcceEEEEEE
Confidence 357889999999999999999 4557999999998533 12233567889999999999999999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhcC----CCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeee
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERT----GNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYI 857 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl 857 (1058)
+++..++||||++ |+|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||
T Consensus 74 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl 149 (317)
T 2pmi_A 74 TENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKL 149 (317)
T ss_dssp CTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEE
T ss_pred ECCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEE
Confidence 9999999999998 59999987542 24589999999999999999999999 9999999999999999999999
Q ss_pred eccccceeccCCCcccccccccCcCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhc
Q 043053 858 ADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKK 936 (1058)
Q Consensus 858 ~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 936 (1058)
+|||+++...... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ......+....
T Consensus 150 ~Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~~~ 225 (317)
T 2pmi_A 150 GDFGLARAFGIPV--NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND--EEQLKLIFDIM 225 (317)
T ss_dssp CCCSSCEETTSCC--CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHH
T ss_pred CcCccceecCCCc--ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHh
Confidence 9999998765332 22345578999999999876 4689999999999999999999999975422 11111111110
Q ss_pred Cc------------cccCCCCCCCCchhHHH----------HHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 937 GI------------QVLDPSLLSRPESEIDE----------MLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 937 ~~------------~~~~~~~~~~~~~~~~~----------~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
.. ....+............ ...+.+++..||+.||++|||++|++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 226 GTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 00 00011111111100000 0134568889999999999999999874
No 113
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=4.4e-39 Score=370.60 Aligned_cols=207 Identities=23% Similarity=0.294 Sum_probs=180.2
Q ss_pred hhccccceeccc--cceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEE
Q 043053 704 KCLVDANVIGKG--CSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCC 780 (1058)
Q Consensus 704 ~~~~~~~~lG~G--~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 780 (1058)
.+|.+.+.||+| +||+||+|. ..+|+.||||++.... ......+.+.+|+.++++++|||||++++++
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 95 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA---------CSNEMVTFLQGELHVSKLFNHPNIVPYRATF 95 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGG---------SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccc---------cChHHHHHHHHHHHHHHhCCCCCCCcEeEEE
Confidence 689999999999 999999994 4589999999985432 2234567889999999999999999999999
Q ss_pred EcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecc
Q 043053 781 WNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADF 860 (1058)
Q Consensus 781 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~Df 860 (1058)
.+++..|+||||+++|+|.+++.......+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~df 172 (389)
T 3gni_B 96 IADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGL 172 (389)
T ss_dssp EETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCG
T ss_pred EECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccc
Confidence 9999999999999999999999876567799999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccCCCc-----ccccccccCcCCccCcccccc--CCCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 043053 861 GLAKLVDDGDF-----ARSSNTVAGSYGYIAPEYGYM--MKITEKSDVYSYGVVVLEVLTGKQPIDPTI 922 (1058)
Q Consensus 861 Gl~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 922 (1058)
|.+........ ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 173 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 241 (389)
T 3gni_B 173 RSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 241 (389)
T ss_dssp GGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred ccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence 99865432211 112234578999999999887 678999999999999999999999997643
No 114
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=354.69 Aligned_cols=256 Identities=27% Similarity=0.430 Sum_probs=198.1
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
++|.+.+.||+|+||+||+|... ++.||||++.. ....+.+.+|++++++++||||+++++++.
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~-------------~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-- 71 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES-------------ESERKAFIVELRQLSRVNHPNIVKLYGACL-- 71 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSS-------------TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecC-------------hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--
Confidence 57889999999999999999775 78999999842 234678999999999999999999999886
Q ss_pred CCceEEEEecCCCChhhhhhhcCC-CCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCC-eeeeccc
Q 043053 784 NNRLLMYDYMPNGSLGSLLHERTG-NALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFE-PYIADFG 861 (1058)
Q Consensus 784 ~~~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~-~kl~DfG 861 (1058)
+..++||||+++|+|.++++.... ..+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||
T Consensus 72 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg 151 (307)
T 2eva_A 72 NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG 151 (307)
T ss_dssp TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCC
T ss_pred CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccc
Confidence 458999999999999999986432 24788999999999999999999932229999999999999998886 7999999
Q ss_pred cceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcccc
Q 043053 862 LAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVL 941 (1058)
Q Consensus 862 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1058)
++...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||................. .
T Consensus 152 ~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-----~ 221 (307)
T 2eva_A 152 TACDIQTH-----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG-----T 221 (307)
T ss_dssp C-----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTT-----C
T ss_pred cccccccc-----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcC-----C
Confidence 99765432 2344699999999999999999999999999999999999999975433222221111111 1
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043053 942 DPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHER 991 (1058)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~ 991 (1058)
.+......+.. +.+++.+||+.||++|||++++++.|+.+....
T Consensus 222 ~~~~~~~~~~~------l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 222 RPPLIKNLPKP------IESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp CCCCBTTCCHH------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred CCCcccccCHH------HHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 12222222222 334778899999999999999999999886543
No 115
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=7.6e-39 Score=359.03 Aligned_cols=262 Identities=21% Similarity=0.359 Sum_probs=193.9
Q ss_pred hhccccceeccccceEEEEEEecC-Cc---EEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDN-GE---VIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~---~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
++|.+.+.||+|+||+||+|.... ++ .||||++.... ......+.+.+|++++++++||||++++++
T Consensus 23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 93 (323)
T 3qup_A 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADI---------IASSDIEEFLREAACMKEFDHPHVAKLVGV 93 (323)
T ss_dssp --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC---------------CHHHHHHHHHHHHHTTCCCTTBCCCCEE
T ss_pred hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccc---------cCHHHHHHHHHHHHHHHHCCCCceehhhce
Confidence 579999999999999999995543 32 79999985431 123446889999999999999999999999
Q ss_pred EEcCCCc------eEEEEecCCCChhhhhhhcC----CCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEE
Q 043053 780 CWNRNNR------LLMYDYMPNGSLGSLLHERT----GNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILI 849 (1058)
Q Consensus 780 ~~~~~~~------~lv~e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill 849 (1058)
+...... ++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+||++
T Consensus 94 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli 170 (323)
T 3qup_A 94 SLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCML 170 (323)
T ss_dssp EECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred eeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEE
Confidence 9877655 99999999999999997532 22589999999999999999999999 99999999999999
Q ss_pred cCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhH
Q 043053 850 GLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHV 928 (1058)
Q Consensus 850 ~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~ 928 (1058)
+.++.+||+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ...
T Consensus 171 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~ 248 (323)
T 3qup_A 171 AEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN--AEI 248 (323)
T ss_dssp CTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGH
T ss_pred cCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh--HHH
Confidence 9999999999999987765544344445567889999999999999999999999999999999 9999975432 223
Q ss_pred HHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 929 VDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
...+..... .......+ . .+.+++.+||+.||++|||+.++++.++++...
T Consensus 249 ~~~~~~~~~-----~~~~~~~~---~---~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 249 YNYLIGGNR-----LKQPPECM---E---EVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp HHHHHTTCC-----CCCCTTCC---H---HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHhcCCC-----CCCCCccC---H---HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 222222111 11111122 2 234578889999999999999999999988654
No 116
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1e-38 Score=351.53 Aligned_cols=259 Identities=26% Similarity=0.470 Sum_probs=202.3
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|...+.||+|+||+||+| +..+++.||||++....... ........+.+.+|++++++++||||+++++++.+
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 94 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEG----ETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN 94 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTC----CHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeecccccc----chhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC
Confidence 67899999999999999999 45689999999985432110 00011122789999999999999999999999865
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCC--eEeCCCCCCcEEEcCCCC-----e
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPP--IVHRDIKANNILIGLEFE-----P 855 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivHrDikp~Nill~~~~~-----~ 855 (1058)
.. ++||||+++|+|.+++... ...+++..++.++.|+++||+|||+. + |+||||||+||+++.++. +
T Consensus 95 ~~--~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~ 168 (287)
T 4f0f_A 95 PP--RMVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCA 168 (287)
T ss_dssp TT--EEEEECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCE
T ss_pred CC--eEEEEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeE
Confidence 43 7999999999999998764 46799999999999999999999999 7 999999999999988776 9
Q ss_pred eeeccccceeccCCCcccccccccCcCCccCccccc--cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHH
Q 043053 856 YIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGY--MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVR 933 (1058)
Q Consensus 856 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~ 933 (1058)
||+|||+++.... ......||+.|+|||++. ...++.++||||+||++|||++|+.||...............
T Consensus 169 kl~Dfg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~ 243 (287)
T 4f0f_A 169 KVADFGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR 243 (287)
T ss_dssp EECCCTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHH
T ss_pred EeCCCCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHh
Confidence 9999999975433 233567999999999983 455788999999999999999999999865443332232222
Q ss_pred hhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhh
Q 043053 934 QKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEI 987 (1058)
Q Consensus 934 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~ 987 (1058)
... ..+......+.. +.+++..||+.||++|||++++++.|+++
T Consensus 244 ~~~----~~~~~~~~~~~~------l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 244 EEG----LRPTIPEDCPPR------LRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HSC----CCCCCCTTSCHH------HHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ccC----CCCCCCcccCHH------HHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 211 122222222322 33477789999999999999999998763
No 117
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=5.7e-39 Score=350.41 Aligned_cols=257 Identities=30% Similarity=0.441 Sum_probs=193.3
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
++|...+.||+|+||.||+|... ++.||||++..... .......+.+.+|+++++.++||||+++++++.++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~-------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 78 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPD-------EDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKE 78 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC-----------------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCc-------ccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 57889999999999999999765 89999999854321 12234467899999999999999999999999999
Q ss_pred CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcC--------CCCe
Q 043053 784 NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGL--------EFEP 855 (1058)
Q Consensus 784 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~--------~~~~ 855 (1058)
+..++||||+++|+|.+++.. ..+++..++.++.|+++||+|||+.+..+|+||||||+||+++. ++.+
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~ 155 (271)
T 3dtc_A 79 PNLCLVMEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKIL 155 (271)
T ss_dssp --CEEEEECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCE
T ss_pred CceEEEEEcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcce
Confidence 999999999999999999964 56899999999999999999999993223999999999999986 6789
Q ss_pred eeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhh
Q 043053 856 YIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQK 935 (1058)
Q Consensus 856 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 935 (1058)
||+|||+++...... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... ...........
T Consensus 156 kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~ 229 (271)
T 3dtc_A 156 KITDFGLAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID--GLAVAYGVAMN 229 (271)
T ss_dssp EECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC--HHHHHHHHHTS
T ss_pred EEccCCccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHhhhcC
Confidence 999999998655422 224569999999999999899999999999999999999999997542 11111111111
Q ss_pred cCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhh
Q 043053 936 KGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEI 987 (1058)
Q Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~ 987 (1058)
..........+. .+.+++.+||+.||++|||++|++++|+++
T Consensus 230 ----~~~~~~~~~~~~------~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 230 ----KLALPIPSTCPE------PFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ----CCCCCCCTTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ----CCCCCCCcccCH------HHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 111111222222 233477889999999999999999998754
No 118
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.2e-38 Score=348.81 Aligned_cols=257 Identities=26% Similarity=0.343 Sum_probs=208.5
Q ss_pred HHHhhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 701 QVLKCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 701 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
...++|.+.+.||+|+||.||+|. ..+++.||||++... ......+.+.+|+.++++++||||++++++
T Consensus 4 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 73 (276)
T 2yex_A 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK----------RAVDCPENIKKEICINKMLNHENVVKFYGH 73 (276)
T ss_dssp HHHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGG----------GCTTHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ceecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeec----------cchhhhHHHHHHHHHHHhcCCCCceeeeeE
Confidence 356899999999999999999995 457999999998533 122346789999999999999999999999
Q ss_pred EEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeec
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIAD 859 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~D 859 (1058)
+.+++..++||||+++|+|.+++.. ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 74 ~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~d 148 (276)
T 2yex_A 74 RREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISD 148 (276)
T ss_dssp EEETTEEEEEEECCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred EEcCCEEEEEEEecCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEee
Confidence 9999999999999999999999975 35789999999999999999999999 999999999999999999999999
Q ss_pred cccceeccCCCcccccccccCcCCccCccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCc
Q 043053 860 FGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKI-TEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGI 938 (1058)
Q Consensus 860 fGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1058)
||.+................||+.|+|||++.+..+ +.++||||+|+++|||++|+.||............+......
T Consensus 149 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~- 227 (276)
T 2yex_A 149 FGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY- 227 (276)
T ss_dssp CTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT-
T ss_pred CCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc-
Confidence 999987654332233445679999999999887765 778999999999999999999998664444444333322111
Q ss_pred cccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 939 QVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
. +. ....+. .+.+++..||+.||++|||++|++++
T Consensus 228 --~-~~-~~~~~~------~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 228 --L-NP-WKKIDS------APLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp --S-TT-GGGSCH------HHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --c-Cc-hhhcCH------HHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 0 00 111111 23347888999999999999999874
No 119
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=9.7e-39 Score=347.73 Aligned_cols=257 Identities=25% Similarity=0.398 Sum_probs=209.5
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
++|...+.||+|+||.||+|...+++.||||++... ....+.+.+|++++++++||||+++++++.++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~------------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 75 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG------------AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT------------TBCHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEcccc------------CCCHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 578999999999999999998888999999998533 12246899999999999999999999999999
Q ss_pred CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccccc
Q 043053 784 NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLA 863 (1058)
Q Consensus 784 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~ 863 (1058)
+..++||||+++|+|.++++.. ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 76 ~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~ 151 (267)
T 3t9t_A 76 APICLVTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMT 151 (267)
T ss_dssp SSCEEEECCCTTCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGG
T ss_pred CCeEEEEeCCCCCcHHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccc
Confidence 9999999999999999999864 45689999999999999999999999 9999999999999999999999999999
Q ss_pred eeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcCccccC
Q 043053 864 KLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKGIQVLD 942 (1058)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1058)
+...... ........++..|+|||+..+..++.++||||+|+++|||++ |+.||.... .......+... ..
T Consensus 152 ~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~~~~~~i~~~--~~--- 223 (267)
T 3t9t_A 152 RFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--NSEVVEDISTG--FR--- 223 (267)
T ss_dssp GGBCCHH-HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--HHHHHHHHHTT--CC---
T ss_pred ccccccc-ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC--HHHHHHHHhcC--Cc---
Confidence 8654322 122334557889999999998889999999999999999999 899997542 22222222211 11
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 943 PSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
.......+. .+..++.+||+.||++|||++++++.|+++..+
T Consensus 224 ~~~~~~~~~------~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 224 LYKPRLAST------HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp CCCCTTSCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCccCcH------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 111111122 233478889999999999999999999988653
No 120
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.5e-39 Score=363.81 Aligned_cols=252 Identities=24% Similarity=0.350 Sum_probs=203.6
Q ss_pred HhhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccceeeEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVRFLGCC 780 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 780 (1058)
.++|.+.+.||+|+||.||+|. ..+|+.||||++...... .....+.+..|..++..+ +||||+++++++
T Consensus 16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~--------~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~ 87 (345)
T 1xjd_A 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL--------MDDDVECTMVEKRVLSLAWEHPFLTHMFCTF 87 (345)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHH--------HTTCHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhh--------hhhhHHHHHHHHHHHHhcCCCCCCCcEEEEE
Confidence 4789999999999999999995 457899999998644221 122356788899999887 899999999999
Q ss_pred EcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecc
Q 043053 781 WNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADF 860 (1058)
Q Consensus 781 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~Df 860 (1058)
.+++..|+||||++||+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 88 ~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DF 162 (345)
T 1xjd_A 88 QTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADF 162 (345)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred EeCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEC
Confidence 9999999999999999999999864 5689999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccc
Q 043053 861 GLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQV 940 (1058)
Q Consensus 861 Gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1058)
|+++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+...
T Consensus 163 G~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--~~~~~~~i~~~----- 233 (345)
T 1xjd_A 163 GMCKENMLGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD--EEELFHSIRMD----- 233 (345)
T ss_dssp TTCBCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHC-----
T ss_pred hhhhhcccCC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHHhC-----
Confidence 9998643322 23456789999999999999999999999999999999999999997542 22222222211
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHH-HHHHH
Q 043053 941 LDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMK-DVAAM 983 (1058)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~-~v~~~ 983 (1058)
.+......+. .+.+++.+||+.||++||++. ++.++
T Consensus 234 -~~~~p~~~s~------~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 234 -NPFYPRWLEK------EAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp -CCCCCTTSCH------HHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred -CCCCCcccCH------HHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 1111122222 234577889999999999997 77654
No 121
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.3e-38 Score=355.01 Aligned_cols=270 Identities=20% Similarity=0.295 Sum_probs=202.3
Q ss_pred HHhhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEE
Q 043053 702 VLKCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCC 780 (1058)
Q Consensus 702 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 780 (1058)
...+|.+.+.||+|+||.||+|. ..+|+.||||++.... .......+.+.+|+.++++++||||+++++++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 101 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFD--------LMDAKARADCIKEIDLLKQLNHPNVIKYYASF 101 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTS--------SCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhh--------ccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 34689999999999999999994 5689999999985421 12334567899999999999999999999999
Q ss_pred EcCCCceEEEEecCCCChhhhhhhc--CCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeee
Q 043053 781 WNRNNRLLMYDYMPNGSLGSLLHER--TGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIA 858 (1058)
Q Consensus 781 ~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~ 858 (1058)
...+..++||||+++|+|.+++... ....+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~ 178 (310)
T 2wqm_A 102 IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLG 178 (310)
T ss_dssp EETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEEC
T ss_pred EcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEE
Confidence 9999999999999999999999752 246789999999999999999999999 99999999999999999999999
Q ss_pred ccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCc
Q 043053 859 DFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGI 938 (1058)
Q Consensus 859 DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1058)
|||+++...... .......|++.|+|||++.+..++.++||||||+++|||++|+.||.............+....
T Consensus 179 Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-- 254 (310)
T 2wqm_A 179 DLGLGRFFSSKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD-- 254 (310)
T ss_dssp CC--------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTC--
T ss_pred eccceeeecCCC--ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhccc--
Confidence 999998665432 2233456899999999999989999999999999999999999999754332222222222211
Q ss_pred cccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhhhhh
Q 043053 939 QVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHEREEY 994 (1058)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~~~~ 994 (1058)
..+......+. .+..++..||+.||++|||++++++.++++.....+.
T Consensus 255 --~~~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~ 302 (310)
T 2wqm_A 255 --YPPLPSDHYSE------ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS 302 (310)
T ss_dssp --SCCCCTTTSCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred --CCCCcccccCH------HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhh
Confidence 11111112222 2334778899999999999999999999998765543
No 122
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=364.26 Aligned_cols=256 Identities=22% Similarity=0.303 Sum_probs=196.7
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCC--CcccceeeEEE
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRH--KNIVRFLGCCW 781 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~ 781 (1058)
++|.+.+.||+|+||.||+|...+++.||||++.... ......+.+.+|+.++++++| |||+++++++.
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~ 79 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE---------ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI 79 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTT---------CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccc---------cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEe
Confidence 5689999999999999999987889999999985331 233446789999999999986 99999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccc
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFG 861 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfG 861 (1058)
++...++||| +.+|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+|||++ ++.+||+|||
T Consensus 80 ~~~~~~lv~e-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG 152 (343)
T 3dbq_A 80 TDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFG 152 (343)
T ss_dssp CSSEEEEEEC-CCSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCS
T ss_pred eCCEEEEEEe-CCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecc
Confidence 9999999999 5578999999873 6789999999999999999999999 999999999999997 6789999999
Q ss_pred cceeccCCCcccccccccCcCCccCcccccc-----------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHH
Q 043053 862 LAKLVDDGDFARSSNTVAGSYGYIAPEYGYM-----------MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVD 930 (1058)
Q Consensus 862 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~ 930 (1058)
+++..............+||+.|+|||++.+ ..++.++|||||||++|||++|+.||............
T Consensus 153 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~ 232 (343)
T 3dbq_A 153 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 232 (343)
T ss_dssp SSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH
T ss_pred cccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHH
Confidence 9987655433333446679999999999764 67888999999999999999999999754221111111
Q ss_pred HHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 043053 931 WVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKE 986 (1058)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~ 986 (1058)
..... .........+. .+.+++..||+.||++|||++|++++...
T Consensus 233 ~~~~~-----~~~~~~~~~~~------~l~~li~~~L~~dp~~Rpt~~e~l~hp~~ 277 (343)
T 3dbq_A 233 IIDPN-----HEIEFPDIPEK------DLQDVLKCCLKRDPKQRISIPELLAHPYV 277 (343)
T ss_dssp HHCTT-----SCCCCCCCSCH------HHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred HhcCC-----cccCCcccCCH------HHHHHHHHHcCCChhHCCCHHHHHhCccc
Confidence 11100 11111122222 23347788999999999999999987654
No 123
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=6.3e-39 Score=361.38 Aligned_cols=256 Identities=20% Similarity=0.243 Sum_probs=201.6
Q ss_pred hhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccceeeEEE
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVRFLGCCW 781 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 781 (1058)
++|...+.||+|+||.||+|. ..+++.||||++..... ......+.+.+|+.+++++ +||||+++++++.
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--------~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~ 80 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELV--------NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ 80 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGS--------CSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHh--------cchHHHHHHHHHHHHHHhcCCCCccCeEEEEEE
Confidence 578999999999999999995 45789999999864421 2233457788999999988 7999999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccc
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFG 861 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfG 861 (1058)
+++..|+||||++||+|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 81 ~~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG 155 (345)
T 3a8x_A 81 TESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYG 155 (345)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGG
T ss_pred eCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecc
Confidence 999999999999999999999864 5689999999999999999999999 99999999999999999999999999
Q ss_pred cceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCC----hhHHHHHHhhcC
Q 043053 862 LAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDG----SHVVDWVRQKKG 937 (1058)
Q Consensus 862 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~----~~~~~~~~~~~~ 937 (1058)
+++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ............
T Consensus 156 ~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~ 233 (345)
T 3a8x_A 156 MCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 233 (345)
T ss_dssp GCBCSCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHH
T ss_pred ccccccCCC--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHc
Confidence 998643222 23446689999999999999999999999999999999999999997532110 111111111100
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCH------HHHHHH
Q 043053 938 IQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTM------KDVAAM 983 (1058)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~------~~v~~~ 983 (1058)
. ........+. .+.+++..||+.||++||++ ++++++
T Consensus 234 ~---~~~~p~~~s~------~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 234 K---QIRIPRSLSV------KAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp C---CCCCCTTSCH------HHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred C---CCCCCCCCCH------HHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 0 1111112222 23457788999999999996 566554
No 124
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=4.3e-39 Score=362.30 Aligned_cols=256 Identities=22% Similarity=0.230 Sum_probs=201.8
Q ss_pred HHHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccceee
Q 043053 701 QVLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVRFLG 778 (1058)
Q Consensus 701 ~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~ 778 (1058)
.+.++|.+.+.||+|+||.||+| +..+|+.||||++.... ....+|++++.++ +||||+++++
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~---------------~~~~~E~~~l~~~~~hp~iv~~~~ 83 (342)
T 2qr7_A 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK---------------RDPTEEIEILLRYGQHPNIITLKD 83 (342)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT---------------CCCHHHHHHHHHHTTSTTBCCEEE
T ss_pred CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc---------------CChHHHHHHHHHhcCCCCcCeEEE
Confidence 45688999999999999999999 55679999999984321 1235788888888 6999999999
Q ss_pred EEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCC----CC
Q 043053 779 CCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLE----FE 854 (1058)
Q Consensus 779 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~----~~ 854 (1058)
++.+++..|+||||++||+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+||++..+ +.
T Consensus 84 ~~~~~~~~~lv~E~~~gg~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~ 158 (342)
T 2qr7_A 84 VYDDGKYVYVVTELMKGGELLDKILR--QKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPES 158 (342)
T ss_dssp EEECSSEEEEEECCCCSCBHHHHHHT--CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGG
T ss_pred EEEcCCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCe
Confidence 99999999999999999999999976 35789999999999999999999999 99999999999998543 35
Q ss_pred eeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCC-hhHHHHHH
Q 043053 855 PYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDG-SHVVDWVR 933 (1058)
Q Consensus 855 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~-~~~~~~~~ 933 (1058)
+||+|||+++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ......+.
T Consensus 159 ~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~ 236 (342)
T 2qr7_A 159 IRICDFGFAKQLRAEN--GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIG 236 (342)
T ss_dssp EEECCCTTCEECBCTT--CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHH
T ss_pred EEEEECCCcccCcCCC--CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHc
Confidence 9999999998765432 22345679999999999988888999999999999999999999997542222 12222222
Q ss_pred hhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 043053 934 QKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKE 986 (1058)
Q Consensus 934 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~ 986 (1058)
... ...........+. .+.+++..||+.||++|||+++++++-..
T Consensus 237 ~~~--~~~~~~~~~~~s~------~~~~li~~~L~~dP~~R~t~~~il~hp~~ 281 (342)
T 2qr7_A 237 SGK--FSLSGGYWNSVSD------TAKDLVSKMLHVDPHQRLTAALVLRHPWI 281 (342)
T ss_dssp HCC--CCCCSTTTTTSCH------HHHHHHHHHTCSSTTTSCCHHHHTTSHHH
T ss_pred cCC--cccCccccccCCH------HHHHHHHHHCCCChhHCcCHHHHhcCCee
Confidence 211 1111111122222 23447788999999999999999986554
No 125
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=367.87 Aligned_cols=269 Identities=22% Similarity=0.287 Sum_probs=207.8
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|.+.++||+|+||+||+| +..+|+.||||++.... .....+.+.+|++++++++||||+++++++..
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----------~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~ 78 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS----------FLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE 78 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG----------GGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccc----------ccchHHHHHHHHHHHHhcCCCCCCeEEEeecc
Confidence 57899999999999999999 55569999999985432 22335778899999999999999999999987
Q ss_pred CC--CceEEEEecCCCChhhhhhhcC-CCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEE----cCCCCe
Q 043053 783 RN--NRLLMYDYMPNGSLGSLLHERT-GNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILI----GLEFEP 855 (1058)
Q Consensus 783 ~~--~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill----~~~~~~ 855 (1058)
.. ..++||||+++|+|.++++... ...+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+
T Consensus 79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~ 155 (396)
T 4eut_A 79 TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVY 155 (396)
T ss_dssp TTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEE
T ss_pred CCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeE
Confidence 65 5699999999999999998643 23489999999999999999999999 99999999999999 777889
Q ss_pred eeeccccceeccCCCcccccccccCcCCccCcccccc--------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCh-
Q 043053 856 YIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYM--------MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGS- 926 (1058)
Q Consensus 856 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~- 926 (1058)
||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........
T Consensus 156 kL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~ 232 (396)
T 4eut_A 156 KLTDFGAARELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN 232 (396)
T ss_dssp EECCGGGCEECCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC
T ss_pred EEecCCCceEccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch
Confidence 999999998765432 2345679999999998765 5677899999999999999999999975433222
Q ss_pred -hHHHHHHhhcCccc-------------cCCCCCC--CCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 927 -HVVDWVRQKKGIQV-------------LDPSLLS--RPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 927 -~~~~~~~~~~~~~~-------------~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
.....+........ ....... ........ .+..++..||+.||++||+++++++.++++...
T Consensus 233 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 233 KEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQV--LLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp HHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHH--HHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred HHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHh--hchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 22111111111000 0001111 11122222 234588999999999999999999999887554
No 126
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=6e-39 Score=364.45 Aligned_cols=255 Identities=23% Similarity=0.265 Sum_probs=193.4
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|.+.+.||+|+||+||+| +..+++.||||++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 87 (361)
T 3uc3_A 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG------------AAIDENVQREIINHRSLRHPNIVRFKEVILT 87 (361)
T ss_dssp TTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESS------------TTSCHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred CcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecC------------ccccHHHHHHHHHHHhCCCCCCCcEEEEEee
Confidence 68999999999999999999 4558999999998422 1224678899999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCC--eeeecc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFE--PYIADF 860 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~--~kl~Df 860 (1058)
++..++||||+++|+|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 88 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Df 162 (361)
T 3uc3_A 88 PTHLAIIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDF 162 (361)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCC
T ss_pred CCEEEEEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeec
Confidence 99999999999999999999764 5689999999999999999999999 9999999999999987765 999999
Q ss_pred ccceeccCCCcccccccccCcCCccCccccccCCCCcc-cchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcc
Q 043053 861 GLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEK-SDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQ 939 (1058)
Q Consensus 861 Gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1058)
|+++..... .......||+.|+|||++.+..+..+ +||||+||++|+|++|+.||....... .....+.......
T Consensus 163 g~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~~~~~~~ 238 (361)
T 3uc3_A 163 GYSKSSVLH---SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQRILSVK 238 (361)
T ss_dssp CCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHHHHHHTTC
T ss_pred Ccccccccc---CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHHHHHhcCC
Confidence 998743322 22345579999999999888877655 899999999999999999997653322 2222222221111
Q ss_pred ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 043053 940 VLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKE 986 (1058)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~ 986 (1058)
...+.. ...+. .+.+++.+||+.||++|||+.|++++-..
T Consensus 239 ~~~~~~-~~~s~------~~~~li~~~L~~dP~~Rps~~ell~hp~f 278 (361)
T 3uc3_A 239 YSIPDD-IRISP------ECCHLISRIFVADPATRISIPEIKTHSWF 278 (361)
T ss_dssp CCCCTT-SCCCH------HHHHHHHHHSCSCTTTSCCHHHHHTSHHH
T ss_pred CCCCCc-CCCCH------HHHHHHHHHccCChhHCcCHHHHHhCcch
Confidence 111110 11122 23457888999999999999999987554
No 127
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.1e-38 Score=360.05 Aligned_cols=249 Identities=19% Similarity=0.207 Sum_probs=204.4
Q ss_pred hhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|...+.||+|+||.||+|. ..+|+.||||++..... ......+.+.+|++++++++||||+++++++.+
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 112 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV--------VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 112 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH--------HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHh--------ccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 689999999999999999994 45799999999854422 122345788999999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
+...|+||||++||+|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 113 ~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~ 187 (350)
T 1rdq_E 113 NSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGF 187 (350)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEccccc
Confidence 99999999999999999999864 5689999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccccC
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVLD 942 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1058)
++..... ....+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+....
T Consensus 188 a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--~~~~~~~i~~~~------ 254 (350)
T 1rdq_E 188 AKRVKGR-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ--PIQIYEKIVSGK------ 254 (350)
T ss_dssp CEECSSC-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHCC------
T ss_pred ceeccCC-----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC--HHHHHHHHHcCC------
Confidence 9876542 235679999999999999999999999999999999999999997542 222222222111
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHH
Q 043053 943 PSLLSRPESEIDEMLQALGVALLCVNASPDERPT-----MKDVAAML 984 (1058)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt-----~~~v~~~l 984 (1058)
.......+. .+.+++..||+.||++||+ +++++++-
T Consensus 255 ~~~p~~~~~------~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~ 295 (350)
T 1rdq_E 255 VRFPSHFSS------DLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHK 295 (350)
T ss_dssp CCCCTTCCH------HHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSG
T ss_pred CCCCCCCCH------HHHHHHHHHhhcCHHhccCCccCCHHHHHhCc
Confidence 111122222 2344778899999999998 88887654
No 128
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=6.6e-39 Score=375.59 Aligned_cols=261 Identities=23% Similarity=0.250 Sum_probs=195.2
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.++|.+.+.||+|+||+||+| +..+|+.||||++.... ......+++.+|+.+++.++||||+++++++.
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~---------~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 131 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF---------QNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 131 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG---------GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc---------cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEc
Confidence 478999999999999999999 66789999999985431 23344678899999999999999999999997
Q ss_pred cCC------CceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCe
Q 043053 782 NRN------NRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEP 855 (1058)
Q Consensus 782 ~~~------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~ 855 (1058)
... ..|+||||+++ ++.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+
T Consensus 132 ~~~~~~~~~~~~lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~ 203 (464)
T 3ttj_A 132 PQKTLEEFQDVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 203 (464)
T ss_dssp SCCSTTTCCEEEEEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCE
T ss_pred cCCccccCCeEEEEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCE
Confidence 654 35999999976 57666643 489999999999999999999999 99999999999999999999
Q ss_pred eeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhh
Q 043053 856 YIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQK 935 (1058)
Q Consensus 856 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 935 (1058)
||+|||+++..... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||.+... ...+...++..
T Consensus 204 kl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~-~~~~~~i~~~l 279 (464)
T 3ttj_A 204 KILDFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY-IDQWNKVIEQL 279 (464)
T ss_dssp EECCCCCC-----C---CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHH
T ss_pred EEEEEEeeeecCCC---cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhc
Confidence 99999999876543 233456899999999999999999999999999999999999999975421 11111111100
Q ss_pred cCc--c-----------c--cCCCCC------------CCCchhH--HHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 936 KGI--Q-----------V--LDPSLL------------SRPESEI--DEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 936 ~~~--~-----------~--~~~~~~------------~~~~~~~--~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
... . . ..+... ....... .....+.+++.+||..||++|||++|++++-
T Consensus 280 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 357 (464)
T 3ttj_A 280 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 357 (464)
T ss_dssp CSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred CCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcCh
Confidence 000 0 0 000000 0000011 1123456789999999999999999999864
No 129
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=7.4e-39 Score=368.54 Aligned_cols=257 Identities=22% Similarity=0.262 Sum_probs=193.9
Q ss_pred HHHhhcccc-ceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcc-cCCCccccee
Q 043053 701 QVLKCLVDA-NVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGS-IRHKNIVRFL 777 (1058)
Q Consensus 701 ~~~~~~~~~-~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~ 777 (1058)
.+.+.|.+. ++||+|+||+||+| +..+|+.||||++.. ...+.+|++++.+ .+||||++++
T Consensus 58 ~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----------------~~~~~~E~~~~~~~~~hp~iv~l~ 121 (400)
T 1nxk_A 58 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----------------CPKARREVELHWRASQCPHIVRIV 121 (400)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----------------SHHHHHHHHHHHHHTTSTTBCCEE
T ss_pred cccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc----------------chhHHHHHHHHHHhcCCCCcceEe
Confidence 345667766 78999999999999 556799999998831 2456788888744 4799999999
Q ss_pred eEEEc----CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcC--
Q 043053 778 GCCWN----RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGL-- 851 (1058)
Q Consensus 778 ~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~-- 851 (1058)
+++.. ....|+||||++||+|.+++.......+++..+..|+.||+.||+|||+. +|+||||||+|||++.
T Consensus 122 ~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~ 198 (400)
T 1nxk_A 122 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKR 198 (400)
T ss_dssp EEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSS
T ss_pred EEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCC
Confidence 99875 55679999999999999999876556799999999999999999999999 9999999999999998
Q ss_pred -CCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCC--hhH
Q 043053 852 -EFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDG--SHV 928 (1058)
Q Consensus 852 -~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~--~~~ 928 (1058)
++.+||+|||+++..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...
T Consensus 199 ~~~~~kl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~ 275 (400)
T 1nxk_A 199 PNAILKLTDFGFAKETTSH---NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 275 (400)
T ss_dssp TTCCEEECCCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSH
T ss_pred CCccEEEEecccccccCCC---CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHH
Confidence 789999999999876542 22345679999999999999999999999999999999999999997653322 112
Q ss_pred HHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhh
Q 043053 929 VDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEI 987 (1058)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~ 987 (1058)
...+.... .....+ .....+. .+.+++..||+.||++|||++|++++-...
T Consensus 276 ~~~i~~~~-~~~~~~-~~~~~s~------~~~~li~~~L~~dP~~Rpt~~eil~hp~~~ 326 (400)
T 1nxk_A 276 KTRIRMGQ-YEFPNP-EWSEVSE------EVKMLIRNLLKTEPTQRMTITEFMNHPWIM 326 (400)
T ss_dssp HHHHHHTC-CCCCTT-TTTTSCH------HHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred HHHHHcCc-ccCCCc-ccccCCH------HHHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence 22222111 111111 1111222 234578899999999999999999876543
No 130
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=5.8e-39 Score=379.29 Aligned_cols=255 Identities=23% Similarity=0.270 Sum_probs=207.2
Q ss_pred hhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|...++||+|+||.||+|. ..+|+.||||++...... .....+.+.+|++++++++|||||++++++.+
T Consensus 184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~--------~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~ 255 (576)
T 2acx_A 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK--------KRKGEAMALNEKQILEKVNSRFVVSLAYAYET 255 (576)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH--------HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhh--------hhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee
Confidence 578899999999999999994 458999999998644221 22335678899999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
.+..|+||||++||+|.+++.......+++..++.++.||+.||+|||+. +||||||||+|||++.++.+||+|||+
T Consensus 256 ~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGl 332 (576)
T 2acx_A 256 KDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGL 332 (576)
T ss_dssp SSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEeccc
Confidence 99999999999999999999875555699999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCC--hhHHHHHHhhcCccc
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDG--SHVVDWVRQKKGIQV 940 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~--~~~~~~~~~~~~~~~ 940 (1058)
++...... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ..+...+...
T Consensus 333 a~~~~~~~---~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~----- 404 (576)
T 2acx_A 333 AVHVPEGQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV----- 404 (576)
T ss_dssp CEECCTTC---CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC-----
T ss_pred ceecccCc---cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc-----
Confidence 98765432 2334579999999999999889999999999999999999999998653321 1122211111
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHH
Q 043053 941 LDPSLLSRPESEIDEMLQALGVALLCVNASPDERP-----TMKDVAAML 984 (1058)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----t~~~v~~~l 984 (1058)
........+. .+.+++..||+.||++|| +++|++++-
T Consensus 405 -~~~~p~~~s~------~~~dLI~~lL~~dP~~R~g~~~~sa~eil~Hp 446 (576)
T 2acx_A 405 -PEEYSERFSP------QARSLCSQLLCKDPAERLGCRGGSAREVKEHP 446 (576)
T ss_dssp -CCCCCTTSCH------HHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSG
T ss_pred -cccCCccCCH------HHHHHHHHhccCCHHHcCCCCCCCHHHHHhCh
Confidence 1111222222 234577889999999999 788888753
No 131
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=8.7e-39 Score=366.95 Aligned_cols=258 Identities=20% Similarity=0.223 Sum_probs=203.4
Q ss_pred hhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|.+.++||+|+||+||+|. ..+++.||+|++.+.... .....+.+.+|+.+++.++|||||++++++.+
T Consensus 69 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~--------~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI--------KRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH--------HTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred cccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhh--------hhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 679999999999999999994 457899999998543221 11223568899999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
++..|+||||++||+|.++++. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccce
Confidence 9999999999999999999975 3589999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCC----CCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCc
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMK----ITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGI 938 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1058)
++....... ......+||+.|+|||++.+.. ++.++||||+||++|||++|+.||..... ......+....
T Consensus 215 a~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--~~~~~~i~~~~-- 289 (410)
T 3v8s_A 215 CMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--VGTYSKIMNHK-- 289 (410)
T ss_dssp CEECCTTSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHTHH--
T ss_pred eEeeccCCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh--hhHHHHHHhcc--
Confidence 987655432 2334678999999999987665 78899999999999999999999975421 11111111111
Q ss_pred cccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHHHh
Q 043053 939 QVLDPSLLSRPESEIDEMLQALGVALLCVNASPDE--RPTMKDVAAMLKE 986 (1058)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~--RPt~~~v~~~l~~ 986 (1058)
...........+. .+.+++..||..+|.+ ||+++||+++-..
T Consensus 290 ~~~~~p~~~~~s~------~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f 333 (410)
T 3v8s_A 290 NSLTFPDDNDISK------EAKNLICAFLTDREVRLGRNGVEEIKRHLFF 333 (410)
T ss_dssp HHCCCCTTCCCCH------HHHHHHHHHSSCGGGCTTSSCHHHHHTSGGG
T ss_pred ccccCCCcccccH------HHHHHHHHHccChhhhCCCCCHHHHhcCccc
Confidence 0001011111222 2334677899999988 9999999987543
No 132
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-38 Score=354.90 Aligned_cols=272 Identities=28% Similarity=0.374 Sum_probs=204.7
Q ss_pred HHHHhhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc--CCCccccee
Q 043053 700 EQVLKCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI--RHKNIVRFL 777 (1058)
Q Consensus 700 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~ 777 (1058)
..+.++|.+.+.||+|+||.||+|... ++.||||++... ....+.+|.+++... +||||++++
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--------------~~~~~~~e~~~~~~~~~~h~~i~~~~ 97 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT--------------EEASWFRETEIYQTVLMRHENILGFI 97 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG--------------GHHHHHHHHHHHTSTTCCCTTBCCEE
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc--------------ccchhhhHHHHHHHHhhcCCCeeeEE
Confidence 345689999999999999999999776 899999998422 134455566666555 899999999
Q ss_pred eEEEcC----CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccC-----CCCeEeCCCCCCcEE
Q 043053 778 GCCWNR----NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDC-----VPPIVHRDIKANNIL 848 (1058)
Q Consensus 778 ~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivHrDikp~Nil 848 (1058)
+++... ...++||||+++|+|.++++. ..+++..++.++.|++.||+|||+.+ .++|+||||||+||+
T Consensus 98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nil 174 (337)
T 3mdy_A 98 AADIKGTGSWTQLYLITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNIL 174 (337)
T ss_dssp EEEEESCGGGCEEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEE
T ss_pred EEEccCCCCCCceEEEEeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEE
Confidence 999877 667999999999999999975 36899999999999999999999752 238999999999999
Q ss_pred EcCCCCeeeeccccceeccCCCcc--cccccccCcCCccCccccccCCCCcc------cchhhHHHHHHHHHhC------
Q 043053 849 IGLEFEPYIADFGLAKLVDDGDFA--RSSNTVAGSYGYIAPEYGYMMKITEK------SDVYSYGVVVLEVLTG------ 914 (1058)
Q Consensus 849 l~~~~~~kl~DfGl~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~------~DvwSlGvvl~elltg------ 914 (1058)
++.++.+||+|||+++........ .......||+.|+|||++.+.....+ +|||||||++|||++|
T Consensus 175 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~ 254 (337)
T 3mdy_A 175 VKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGI 254 (337)
T ss_dssp ECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTB
T ss_pred ECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccc
Confidence 999999999999999876543211 11235579999999999887766655 9999999999999999
Q ss_pred ----CCCCCCCCCCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 915 ----KQPIDPTIPDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 915 ----~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
..||....+............ ......+........ ......+.+++.+||+.||++|||+++++++|+.+...
T Consensus 255 ~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 255 VEEYQLPYHDLVPSDPSYEDMREIV-CIKKLRPSFPNRWSS-DECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332 (337)
T ss_dssp CCCCCCTTTTTSCSSCCHHHHHHHH-TTSCCCCCCCGGGGG-SHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred cccccccHhhhcCCCCchhhhHHHH-hhhccCccccccchh-hHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence 677765444333332222211 112222222111110 11222345588999999999999999999999988765
Q ss_pred h
Q 043053 991 R 991 (1058)
Q Consensus 991 ~ 991 (1058)
.
T Consensus 333 ~ 333 (337)
T 3mdy_A 333 Q 333 (337)
T ss_dssp T
T ss_pred c
Confidence 3
No 133
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.8e-38 Score=348.06 Aligned_cols=257 Identities=26% Similarity=0.413 Sum_probs=208.3
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
++|.+.+.||+|+||.||+|...+++.||||++... ....+.+.+|++++++++||||+++++++. .
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~------------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~ 79 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG------------SMSPDAFLAEANLMKQLQHQRLVRLYAVVT-Q 79 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT------------SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCC------------cccHHHHHHHHHHHHhCCCcCcceEEEEEc-C
Confidence 688999999999999999998888889999998532 123578999999999999999999999986 4
Q ss_pred CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccccc
Q 043053 784 NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLA 863 (1058)
Q Consensus 784 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~ 863 (1058)
+..++||||+++|+|.+++.......+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 80 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 156 (279)
T 1qpc_A 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLA 156 (279)
T ss_dssp SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCccc
Confidence 5689999999999999999865444789999999999999999999999 9999999999999999999999999999
Q ss_pred eeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcCccccC
Q 043053 864 KLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKGIQVLD 942 (1058)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1058)
+....... .......++..|+|||+..+..++.++||||||+++|||++ |+.||.... .......+.... .
T Consensus 157 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--~~~~~~~~~~~~-----~ 228 (279)
T 1qpc_A 157 RLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--NPEVIQNLERGY-----R 228 (279)
T ss_dssp EECSSSCE-ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHHHHHHHHTTC-----C
T ss_pred ccccCccc-ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC--HHHHHHHHhccc-----C
Confidence 87755332 22334557889999999988889999999999999999999 999997542 222222222211 1
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 943 PSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
.......+. .+..++..||+.||++|||++++++.|+++...
T Consensus 229 ~~~~~~~~~------~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 229 MVRPDNCPE------ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp CCCCTTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCcccccH------HHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 111112222 233477889999999999999999999987654
No 134
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.2e-38 Score=357.47 Aligned_cols=261 Identities=21% Similarity=0.267 Sum_probs=205.0
Q ss_pred cHHHHHhhcccc-ceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC-CCccc
Q 043053 698 SVEQVLKCLVDA-NVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR-HKNIV 774 (1058)
Q Consensus 698 ~~~~~~~~~~~~-~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv 774 (1058)
..+.+.++|.+. +.||+|+||.||+| +..+++.||||++.... ........+.+|+.+++++. ||||+
T Consensus 22 ~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~~e~~~l~~l~~~~~iv 92 (327)
T 3lm5_A 22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRR---------RGQDCRAEILHEIAVLELAKSCPRVI 92 (327)
T ss_dssp CHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEE---------TTEECHHHHHHHHHHHHHTTTCTTBC
T ss_pred HHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhh---------cchHHHHHHHHHHHHHHhccCCCCEE
Confidence 356677788887 89999999999999 55579999999985432 22344678999999999995 69999
Q ss_pred ceeeEEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcC---
Q 043053 775 RFLGCCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGL--- 851 (1058)
Q Consensus 775 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~--- 851 (1058)
++++++.+.+..++||||+++|+|.+++.......+++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 93 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~ 169 (327)
T 3lm5_A 93 NLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYP 169 (327)
T ss_dssp CEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTT
T ss_pred EEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCC
Confidence 9999999999999999999999999999766567899999999999999999999999 9999999999999998
Q ss_pred CCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHH
Q 043053 852 EFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDW 931 (1058)
Q Consensus 852 ~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~ 931 (1058)
++.+||+|||+++...... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ......
T Consensus 170 ~~~~kL~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~ 244 (327)
T 3lm5_A 170 LGDIKIVDFGMSRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN--QETYLN 244 (327)
T ss_dssp BCCEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH
T ss_pred CCcEEEeeCccccccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--hHHHHH
Confidence 7899999999998765432 23346799999999999999999999999999999999999999975421 111111
Q ss_pred HHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 932 VRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
+... ............+.. +.+++..||+.||++|||+++++++
T Consensus 245 i~~~--~~~~~~~~~~~~~~~------~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 245 ISQV--NVDYSEETFSSVSQL------ATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHT--CCCCCTTTTTTSCHH------HHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHhc--ccccCchhhcccCHH------HHHHHHHHcCCChhhCcCHHHHhCC
Confidence 1111 111111111222222 3347788999999999999999875
No 135
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=7.3e-39 Score=375.13 Aligned_cols=256 Identities=28% Similarity=0.455 Sum_probs=202.6
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
++|...+.||+|+||.||+|....+..||||++.... ...+.|.+|++++++++||||+++++++.+
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~------------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~- 250 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT------------MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 250 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS------------SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC------------CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-
Confidence 5788999999999999999988878889999985321 225789999999999999999999999876
Q ss_pred CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccccc
Q 043053 784 NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLA 863 (1058)
Q Consensus 784 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~ 863 (1058)
+..++||||+++|+|.++++......+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 251 ~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a 327 (452)
T 1fmk_A 251 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLA 327 (452)
T ss_dssp SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTT
T ss_pred CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccc
Confidence 6789999999999999999865456789999999999999999999999 9999999999999999999999999999
Q ss_pred eeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcCccccC
Q 043053 864 KLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKGIQVLD 942 (1058)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1058)
+....... .......++..|+|||++.+..++.++|||||||++|||++ |+.||.... .......+.... .
T Consensus 328 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~--~~~~~~~i~~~~-----~ 399 (452)
T 1fmk_A 328 RLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--NREVLDQVERGY-----R 399 (452)
T ss_dssp C---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHHHHHHHHTTC-----C
T ss_pred eecCCCce-ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCC-----C
Confidence 87654322 22234457889999999998899999999999999999999 999997542 222222222211 1
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhh
Q 043053 943 PSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKH 989 (1058)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~ 989 (1058)
.......+. .+.+++..||+.||++|||++++++.|+++..
T Consensus 400 ~~~~~~~~~------~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 400 MPCPPECPE------SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp CCCCTTSCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred CCCCCCCCH------HHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence 111112222 23347888999999999999999999988754
No 136
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.4e-38 Score=353.37 Aligned_cols=263 Identities=25% Similarity=0.364 Sum_probs=205.1
Q ss_pred hhccccceeccccceEEEEEE-----ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceee
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-----MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLG 778 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~ 778 (1058)
++|...+.||+|+||.||+|. ..+++.||||++... ......+.+.+|++++++++||||+++++
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 90 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE----------SGGNHIADLKKEIEILRNLYHENIVKYKG 90 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC---------------CCHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccc----------ccchhHHHHHHHHHHHHhCCCCCeeeeee
Confidence 568999999999999999997 357899999998543 22334578999999999999999999999
Q ss_pred EEEcC--CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCee
Q 043053 779 CCWNR--NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPY 856 (1058)
Q Consensus 779 ~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~k 856 (1058)
++.+. ...++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 91 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~k 166 (302)
T 4e5w_A 91 ICTEDGGNGIKLIMEFLPSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVK 166 (302)
T ss_dssp EEEC---CCEEEEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEE
T ss_pred EEecCCCceEEEEEEeCCCCcHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEE
Confidence 99876 5679999999999999999764 46689999999999999999999999 999999999999999999999
Q ss_pred eeccccceeccCCCc-ccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCC----------CCC
Q 043053 857 IADFGLAKLVDDGDF-ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTI----------PDG 925 (1058)
Q Consensus 857 l~DfGl~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~----------~~~ 925 (1058)
|+|||+++....... ........||..|+|||++.+..++.++||||+|+++|||++|+.|+.... ...
T Consensus 167 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 246 (302)
T 4e5w_A 167 IGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQ 246 (302)
T ss_dssp ECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGG
T ss_pred ECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccc
Confidence 999999987765432 123345568889999999998889999999999999999999999874321 011
Q ss_pred hhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhh
Q 043053 926 SHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIK 988 (1058)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~ 988 (1058)
.............. ........+. .+.+++..||+.||++|||++++++.|+++.
T Consensus 247 ~~~~~~~~~~~~~~--~~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 247 MTVTRLVNTLKEGK--RLPCPPNCPD------EVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp GHHHHHHHHHHTTC--CCCCCTTCCH------HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHhccC--CCCCCCCCCH------HHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 11111111111110 1111111222 2334788899999999999999999998763
No 137
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.3e-38 Score=354.63 Aligned_cols=261 Identities=21% Similarity=0.291 Sum_probs=208.3
Q ss_pred HHHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 701 QVLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 701 ~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
.+.++|.+.+.||+|+||.||+| +..+|+.||||++....... .......+.+.+|+.++++++||||++++++
T Consensus 9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 83 (321)
T 2a2a_A 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRA-----SRRGVSREEIEREVSILRQVLHHNVITLHDV 83 (321)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSS-----CSSSBCHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred hhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccc-----cccchhHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 45688999999999999999999 45579999999985442211 1122346789999999999999999999999
Q ss_pred EEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCC----Ce
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEF----EP 855 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~----~~ 855 (1058)
+.++...++||||+++|+|.+++.. ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++ .+
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~ 158 (321)
T 2a2a_A 84 YENRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHI 158 (321)
T ss_dssp EECSSEEEEEECCCCSCBHHHHHHT--CSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCE
T ss_pred EecCCEEEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCE
Confidence 9999999999999999999999976 35789999999999999999999999 999999999999999888 79
Q ss_pred eeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhh
Q 043053 856 YIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQK 935 (1058)
Q Consensus 856 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 935 (1058)
||+|||+++...... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... .......+...
T Consensus 159 kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~i~~~ 233 (321)
T 2a2a_A 159 KLIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANITSV 233 (321)
T ss_dssp EECCCTTCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--HHHHHHHHHTT
T ss_pred EEccCccceecCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHHhc
Confidence 999999998765532 2335569999999999998899999999999999999999999997542 11111111111
Q ss_pred cCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 936 KGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
....++......+. .+.+++..||+.||++|||++|++++-
T Consensus 234 --~~~~~~~~~~~~~~------~~~~li~~~l~~dp~~Rps~~e~l~hp 274 (321)
T 2a2a_A 234 --SYDFDEEFFSHTSE------LAKDFIRKLLVKETRKRLTIQEALRHP 274 (321)
T ss_dssp --CCCCCHHHHTTCCH------HHHHHHHTTSCSSTTTSCCHHHHHHST
T ss_pred --ccccChhhhcccCH------HHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 11111111111222 234578889999999999999999854
No 138
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=9.5e-39 Score=361.22 Aligned_cols=253 Identities=23% Similarity=0.268 Sum_probs=187.9
Q ss_pred HHhhccccceeccccceEEEEEEe-cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEE
Q 043053 702 VLKCLVDANVIGKGCSGVVYRADM-DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCC 780 (1058)
Q Consensus 702 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 780 (1058)
+.++|.+.+.||+|+||.||+|.. .+++.||||++... ...+.+.+|++++++++||||+++++++
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~~~~~~ 117 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT-------------VDKKIVRTEIGVLLRLSHPNIIKLKEIF 117 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------------------CHHHHHCCCTTBCCEEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc-------------hhHHHHHHHHHHHHhCCCCCCcceeeeE
Confidence 346799999999999999999954 56889999998432 1245688999999999999999999999
Q ss_pred EcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcC---CCCeee
Q 043053 781 WNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGL---EFEPYI 857 (1058)
Q Consensus 781 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~---~~~~kl 857 (1058)
.+++..++||||+++|+|.+++.. ...+++..++.++.|+++||+|||+. +|+||||||+||+++. ++.+||
T Consensus 118 ~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl 192 (349)
T 2w4o_A 118 ETPTEISLVLELVTGGELFDRIVE--KGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKI 192 (349)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHTT--CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEE
T ss_pred ecCCeEEEEEEeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEE
Confidence 999999999999999999999976 35689999999999999999999999 9999999999999975 889999
Q ss_pred eccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcC
Q 043053 858 ADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKG 937 (1058)
Q Consensus 858 ~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 937 (1058)
+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ....+...
T Consensus 193 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~i~~~-- 266 (349)
T 2w4o_A 193 ADFGLSKIVEHQV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF-MFRRILNC-- 266 (349)
T ss_dssp CCCC-------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH-HHHHHHTT--
T ss_pred ccCccccccCccc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH-HHHHHHhC--
Confidence 9999998765432 23356799999999999999999999999999999999999999975432211 11111111
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 938 IQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
............+. .+.+++.+||+.||++|||+.|++++-
T Consensus 267 ~~~~~~~~~~~~~~------~~~~li~~~L~~dP~~Rpt~~e~l~hp 307 (349)
T 2w4o_A 267 EYYFISPWWDEVSL------NAKDLVRKLIVLDPKKRLTTFQALQHP 307 (349)
T ss_dssp CCCCCTTTTTTSCH------HHHHHHHTTSCSSGGGSCCHHHHHHST
T ss_pred CCccCCchhhhCCH------HHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 11111111112222 234578889999999999999998853
No 139
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.2e-38 Score=357.26 Aligned_cols=262 Identities=23% Similarity=0.339 Sum_probs=209.7
Q ss_pred HhhccccceeccccceEEEEEEec------CCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccce
Q 043053 703 LKCLVDANVIGKGCSGVVYRADMD------NGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRF 776 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 776 (1058)
.++|.+.+.||+|+||.||+|... +++.||||++... ........+.+|+.++++++||||+++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~----------~~~~~~~~~~~E~~~l~~l~h~~i~~~ 93 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA----------ASMRERIEFLNEASVMKEFNCHHVVRL 93 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT----------SCHHHHHHHHHHHHHGGGCCCTTBCCE
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccc----------cCHHHHHHHHHHHHHHHhcCCCCEeee
Confidence 368999999999999999999443 4788999998532 223345678999999999999999999
Q ss_pred eeEEEcCCCceEEEEecCCCChhhhhhhcC--------CCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEE
Q 043053 777 LGCCWNRNNRLLMYDYMPNGSLGSLLHERT--------GNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNIL 848 (1058)
Q Consensus 777 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nil 848 (1058)
++++.+++..++||||+++|+|.++++... ...+++..++.++.|+++||+|||+. +|+||||||+||+
T Consensus 94 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIl 170 (322)
T 1p4o_A 94 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 170 (322)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEE
T ss_pred EEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEE
Confidence 999999999999999999999999997532 24578999999999999999999999 9999999999999
Q ss_pred EcCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChh
Q 043053 849 IGLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSH 927 (1058)
Q Consensus 849 l~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~ 927 (1058)
++.++.+||+|||+++...............||+.|+|||++.+..++.++||||+|+++|||++ |..||.... ...
T Consensus 171 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--~~~ 248 (322)
T 1p4o_A 171 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS--NEQ 248 (322)
T ss_dssp ECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC--HHH
T ss_pred EcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC--HHH
Confidence 99999999999999986654433333344567889999999998899999999999999999999 899997542 222
Q ss_pred HHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 928 VVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
....+..... +......+. + +..++..||+.||++|||+.++++.|++....
T Consensus 249 ~~~~~~~~~~-----~~~~~~~~~---~---l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 249 VLRFVMEGGL-----LDKPDNCPD---M---LFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp HHHHHHTTCC-----CCCCTTCCH---H---HHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred HHHHHHcCCc-----CCCCCCCCH---H---HHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 2222222110 111112222 2 33477889999999999999999999887553
No 140
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.5e-38 Score=360.23 Aligned_cols=268 Identities=23% Similarity=0.234 Sum_probs=203.2
Q ss_pred cHHHHHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccce
Q 043053 698 SVEQVLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRF 776 (1058)
Q Consensus 698 ~~~~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 776 (1058)
+..++.++|.+.+.||+|+||+||+| +..+++.||||++...... .......+.+.+|++++++++||||+++
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~~~~~E~~~l~~l~hpniv~~ 93 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIR------QINPKDVERIKTEVRLMKKLHHPNIARL 93 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH------C---CHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhc------ccCHHHHHHHHHHHHHHHhCCCCCccee
Confidence 46788899999999999999999999 5567899999998644221 1123456789999999999999999999
Q ss_pred eeEEEcCCCceEEEEecCCCChhhhhhhcC--------------------------------------CCCCCHHHHHHH
Q 043053 777 LGCCWNRNNRLLMYDYMPNGSLGSLLHERT--------------------------------------GNALEWELRYQI 818 (1058)
Q Consensus 777 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------------------------------~~~l~~~~~~~i 818 (1058)
++++.+.+..++||||+++|+|.+++.... ...+++..++.+
T Consensus 94 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 173 (345)
T 3hko_A 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNI 173 (345)
T ss_dssp EEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHH
T ss_pred ehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHH
Confidence 999999999999999999999999985210 122467788899
Q ss_pred HHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCC--CeeeeccccceeccCCC--cccccccccCcCCccCcccccc--
Q 043053 819 LLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEF--EPYIADFGLAKLVDDGD--FARSSNTVAGSYGYIAPEYGYM-- 892 (1058)
Q Consensus 819 ~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~--~~kl~DfGl~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~-- 892 (1058)
+.|+++||+|||+. +|+||||||+||+++.++ .+||+|||+++...... .........||+.|+|||++.+
T Consensus 174 ~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 250 (345)
T 3hko_A 174 MRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTN 250 (345)
T ss_dssp HHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSS
T ss_pred HHHHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCC
Confidence 99999999999999 999999999999998776 89999999998764322 1122345679999999999865
Q ss_pred CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCC
Q 043053 893 MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPD 972 (1058)
Q Consensus 893 ~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~ 972 (1058)
..++.++|||||||++|||++|+.||..... ......+.... ...........+. .+.+++..||+.||+
T Consensus 251 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~------~~~~li~~~l~~~p~ 320 (345)
T 3hko_A 251 ESYGPKCDAWSAGVLLHLLLMGAVPFPGVND--ADTISQVLNKK--LCFENPNYNVLSP------LARDLLSNLLNRNVD 320 (345)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC--CCTTSGGGGGSCH------HHHHHHHHHSCSCTT
T ss_pred CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCh--HHHHHHHHhcc--cccCCcccccCCH------HHHHHHHHHcCCChh
Confidence 6788999999999999999999999975421 11111111111 1111111111111 234578889999999
Q ss_pred CCCCHHHHHHHH
Q 043053 973 ERPTMKDVAAML 984 (1058)
Q Consensus 973 ~RPt~~~v~~~l 984 (1058)
+|||+.+++++-
T Consensus 321 ~Rps~~~~l~hp 332 (345)
T 3hko_A 321 ERFDAMRALQHP 332 (345)
T ss_dssp TSCCHHHHHHSH
T ss_pred HCCCHHHHhcCh
Confidence 999999998853
No 141
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.3e-38 Score=357.01 Aligned_cols=269 Identities=28% Similarity=0.366 Sum_probs=210.4
Q ss_pred HHHHhhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcc--cCCCccccee
Q 043053 700 EQVLKCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGS--IRHKNIVRFL 777 (1058)
Q Consensus 700 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~ 777 (1058)
..+.++|.+.+.||+|+||.||+|... |+.||||++... ..+.+.+|++++.. ++||||++++
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~--------------~~~~~~~e~~~~~~~~l~h~ni~~~~ 102 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--------------EERSWFREAEIYQTVMLRHENILGFI 102 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG--------------GHHHHHHHHHHHHHSCCCCTTBCCEE
T ss_pred ccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch--------------hHHHHHHHHHHHHHhhcCCCcEEEEE
Confidence 456689999999999999999999774 899999998422 24567888888887 7899999999
Q ss_pred eEEEcCC----CceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhccc--------ccCCCCeEeCCCCCC
Q 043053 778 GCCWNRN----NRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLH--------HDCVPPIVHRDIKAN 845 (1058)
Q Consensus 778 ~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivHrDikp~ 845 (1058)
+++.... ..++||||+++|+|.++++. ..+++..++.++.|+++||+||| +. +|+||||||+
T Consensus 103 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~ 176 (342)
T 1b6c_B 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSK 176 (342)
T ss_dssp EEEECCCSSCCCEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGG
T ss_pred eeecccCCccceeEEEEeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHH
Confidence 9998776 67999999999999999975 46899999999999999999999 77 9999999999
Q ss_pred cEEEcCCCCeeeeccccceeccCCCcc--cccccccCcCCccCccccccC------CCCcccchhhHHHHHHHHHhC---
Q 043053 846 NILIGLEFEPYIADFGLAKLVDDGDFA--RSSNTVAGSYGYIAPEYGYMM------KITEKSDVYSYGVVVLEVLTG--- 914 (1058)
Q Consensus 846 Nill~~~~~~kl~DfGl~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvvl~elltg--- 914 (1058)
||+++.++.+||+|||+++........ .......||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 177 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~ 256 (342)
T 1b6c_B 177 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI 256 (342)
T ss_dssp GEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCB
T ss_pred HEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCc
Confidence 999999999999999999876554321 123455799999999998765 234689999999999999999
Q ss_pred -------CCCCCCCCCCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhh
Q 043053 915 -------KQPIDPTIPDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEI 987 (1058)
Q Consensus 915 -------~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~ 987 (1058)
..||....+.......+..... .....+....... .......+..++.+||+.||++|||+.+++++|+++
T Consensus 257 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i 334 (342)
T 1b6c_B 257 GGIHEDYQLPYYDLVPSDPSVEEMRKVVC-EQKLRPNIPNRWQ-SCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334 (342)
T ss_dssp TTBCCCCCCTTTTTSCSSCCHHHHHHHHT-TSCCCCCCCGGGG-TSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCcccccccCccccCcCcccHHHHHHHHH-HHHhCCCCccccc-chhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 7888765443333333332221 1122222221111 112222345588999999999999999999999998
Q ss_pred hhhh
Q 043053 988 KHER 991 (1058)
Q Consensus 988 ~~~~ 991 (1058)
..+.
T Consensus 335 ~~~~ 338 (342)
T 1b6c_B 335 SQQE 338 (342)
T ss_dssp HHTT
T ss_pred HHHh
Confidence 7653
No 142
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-38 Score=347.86 Aligned_cols=262 Identities=23% Similarity=0.340 Sum_probs=209.2
Q ss_pred hhccccc-eeccccceEEEEEEe---cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 704 KCLVDAN-VIGKGCSGVVYRADM---DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 704 ~~~~~~~-~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
++|.+.+ .||+|+||.||+|.. .++..||||++... ......+.+.+|++++++++||||++++++
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 78 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG----------TEKADTEEMMREAQIMHQLDNPYIVRLIGV 78 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS----------CCHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc----------cchhHHHHHHHHHHHHHhCCCCCEeEEEEE
Confidence 4555655 999999999999954 36788999998532 233456789999999999999999999999
Q ss_pred EEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeec
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIAD 859 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~D 859 (1058)
+ ..+..++||||+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 79 ~-~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~D 153 (287)
T 1u59_A 79 C-QAEALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISD 153 (287)
T ss_dssp E-ESSSEEEEEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECC
T ss_pred e-cCCCcEEEEEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECc
Confidence 9 456689999999999999999754 46789999999999999999999999 999999999999999999999999
Q ss_pred cccceeccCCCc-ccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcC
Q 043053 860 FGLAKLVDDGDF-ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKG 937 (1058)
Q Consensus 860 fGl~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1058)
||+++....... ........||+.|+|||++.+..++.++||||+|+++|||++ |+.||.... .......+....
T Consensus 154 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--~~~~~~~i~~~~- 230 (287)
T 1u59_A 154 FGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIEQGK- 230 (287)
T ss_dssp CTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--THHHHHHHHTTC-
T ss_pred ccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHhcCC-
Confidence 999987754332 122334457899999999988889999999999999999998 999997542 233333333221
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhhhh
Q 043053 938 IQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHEREE 993 (1058)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~~~ 993 (1058)
.+......+. .+..++..||+.||++||++.+++++|+.+..+...
T Consensus 231 ----~~~~~~~~~~------~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 231 ----RMECPPECPP------ELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp ----CCCCCTTCCH------HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred ----cCCCCCCcCH------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 1111222222 233477889999999999999999999998766543
No 143
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.5e-39 Score=370.92 Aligned_cols=276 Identities=16% Similarity=0.204 Sum_probs=202.5
Q ss_pred hhccccceeccccceEEEEEEecC------CcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCccccee
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDN------GEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFL 777 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 777 (1058)
++|.+.+.||+|+||.||+|.... ++.||||++.....................+..|+..++.++||||++++
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~ 114 (364)
T 3op5_A 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW 114 (364)
T ss_dssp CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence 489999999999999999996544 47899998743311000000000001123445667778888999999999
Q ss_pred eEEEcC----CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEc--C
Q 043053 778 GCCWNR----NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIG--L 851 (1058)
Q Consensus 778 ~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~--~ 851 (1058)
+++... ...|+||||+ ||+|.+++... ...+++..++.|+.||+.||+|||+. +|+||||||+|||++ .
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSC
T ss_pred eeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCC
Confidence 998765 3479999999 99999999864 46799999999999999999999999 999999999999999 8
Q ss_pred CCCeeeeccccceeccCCCcc-----cccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCh
Q 043053 852 EFEPYIADFGLAKLVDDGDFA-----RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGS 926 (1058)
Q Consensus 852 ~~~~kl~DfGl~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 926 (1058)
++.+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....+.
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~- 268 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP- 268 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH-
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH-
Confidence 899999999999876543211 11234569999999999999999999999999999999999999998543322
Q ss_pred hHHHHHHhhc--C-ccccCCCCC-CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043053 927 HVVDWVRQKK--G-IQVLDPSLL-SRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHER 991 (1058)
Q Consensus 927 ~~~~~~~~~~--~-~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~ 991 (1058)
.......... . ....++.+. ...+. .+..++..||+.||++||+++++++.|+++..+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~ 331 (364)
T 3op5_A 269 KYVRDSKIRYRENIASLMDKCFPAANAPG------EIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI 331 (364)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHSCTTCCCH------HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhhHHHHHHHhcccccCHH------HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence 2222111111 0 011111110 11122 2344777899999999999999999998876543
No 144
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.1e-38 Score=359.85 Aligned_cols=252 Identities=21% Similarity=0.279 Sum_probs=202.7
Q ss_pred HhhccccceeccccceEEEEEEe-cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccceeeEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRADM-DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVRFLGCC 780 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 780 (1058)
.++|.+.++||+|+||+||+|.. .+|+.||||++...... .....+.+.+|..++..+ +||+|+++++++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~--------~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~ 90 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI--------QDDDVECTMVEKRVLALPGKPPFLTQLHSCF 90 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHH--------HTTCHHHHHHHHHHHTCTTCCTTBCCEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh--------cchHHHHHHHHHHHHHhcCCCCEEeeEEEEE
Confidence 36899999999999999999954 46889999998644221 123357788999999988 799999999999
Q ss_pred EcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecc
Q 043053 781 WNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADF 860 (1058)
Q Consensus 781 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~Df 860 (1058)
.+.+..|+||||++||+|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 91 ~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DF 165 (353)
T 2i0e_A 91 QTMDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADF 165 (353)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred EcCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeC
Confidence 9999999999999999999999864 5689999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccc
Q 043053 861 GLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQV 940 (1058)
Q Consensus 861 Gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1058)
|+++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+...
T Consensus 166 G~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--~~~~~~~i~~~----- 236 (353)
T 2i0e_A 166 GMCKENIWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--EDELFQSIMEH----- 236 (353)
T ss_dssp TTCBCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHC-----
T ss_pred CcccccccCC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC--HHHHHHHHHhC-----
Confidence 9998643322 23446689999999999999999999999999999999999999997542 22222222211
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHH
Q 043053 941 LDPSLLSRPESEIDEMLQALGVALLCVNASPDERPT-----MKDVAAM 983 (1058)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt-----~~~v~~~ 983 (1058)
........+. .+.+++..||+.||++||+ +++++++
T Consensus 237 -~~~~p~~~s~------~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 237 -NVAYPKSMSK------EAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp -CCCCCTTSCH------HHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred -CCCCCCCCCH------HHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1111112222 2345778899999999995 4677654
No 145
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.3e-38 Score=356.05 Aligned_cols=263 Identities=24% Similarity=0.360 Sum_probs=210.2
Q ss_pred hhccccceeccccceEEEEEEe------cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccce
Q 043053 704 KCLVDANVIGKGCSGVVYRADM------DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVRF 776 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~ 776 (1058)
++|.+.+.||+|+||+||+|.. .+++.||||++... ......+.+.+|+.+++++ +||||+++
T Consensus 27 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG----------ATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT----------CCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred hheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccC----------CCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 6899999999999999999953 45689999998533 2233457899999999999 69999999
Q ss_pred eeEEEcCC-CceEEEEecCCCChhhhhhhcCC--------------CCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCC
Q 043053 777 LGCCWNRN-NRLLMYDYMPNGSLGSLLHERTG--------------NALEWELRYQILLGAAQGLAYLHHDCVPPIVHRD 841 (1058)
Q Consensus 777 ~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrD 841 (1058)
++++...+ ..++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+. +|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccccc
Confidence 99987755 48999999999999999986432 2288999999999999999999999 999999
Q ss_pred CCCCcEEEcCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCC
Q 043053 842 IKANNILIGLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDP 920 (1058)
Q Consensus 842 ikp~Nill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~ 920 (1058)
|||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++||||+|+++|||++ |+.||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 999999999999999999999987655433333445668899999999999999999999999999999998 9999976
Q ss_pred CCCCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043053 921 TIPDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHER 991 (1058)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~ 991 (1058)
.... ......+..... .......+. .+..++..||+.||++|||+++++++|+.+.+..
T Consensus 254 ~~~~-~~~~~~~~~~~~-----~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 254 VKID-EEFCRRLKEGTR-----MRAPDYTTP------EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp CCCS-HHHHHHHHHTCC-----CCCCTTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cchh-HHHHHHhccCcc-----CCCCCCCCH------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 5332 222222222211 111111222 2344778899999999999999999999886543
No 146
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-38 Score=372.49 Aligned_cols=251 Identities=23% Similarity=0.351 Sum_probs=205.1
Q ss_pred hhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
.+|.+.+.||+|+||.||+|. ..+|+.||||++..... ......+.+.+|+.+++.++||||+++++++..
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~--------~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~ 87 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKI--------RSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST 87 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHH--------HHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhc--------cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE
Confidence 578999999999999999995 45899999999854321 122345789999999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
++..|+||||+++|+|.+++.. ...+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 88 ~~~~~lv~E~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~ 162 (476)
T 2y94_A 88 PSDIFMVMEYVSGGELFDYICK--NGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGL 162 (476)
T ss_dssp SSEEEEEEECCSSEEHHHHTTS--SSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSS
T ss_pred CCEEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccc
Confidence 9999999999999999999975 46799999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcccc
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKI-TEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVL 941 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1058)
++...... .....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||.... .......+.... .
T Consensus 163 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~--~~~~~~~i~~~~---~- 233 (476)
T 2y94_A 163 SNMMSDGE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH--VPTLFKKICDGI---F- 233 (476)
T ss_dssp CEECCTTC---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS--SHHHHHHHHTTC---C-
T ss_pred hhhccccc---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC--HHHHHHHHhcCC---c-
Confidence 98775543 2345679999999999888765 689999999999999999999997542 222222221111 0
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 942 DPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
......+. .+.+++..||+.||++|||+++++++-
T Consensus 234 --~~p~~~s~------~~~~Li~~~L~~dP~~Rpt~~eil~hp 268 (476)
T 2y94_A 234 --YTPQYLNP------SVISLLKHMLQVDPMKRATIKDIREHE 268 (476)
T ss_dssp --CCCTTCCH------HHHHHHHHHTCSSTTTSCCHHHHHTCH
T ss_pred --CCCccCCH------HHHHHHHHHcCCCchhCcCHHHHHhCH
Confidence 11111122 234578889999999999999999854
No 147
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1e-38 Score=366.40 Aligned_cols=256 Identities=22% Similarity=0.301 Sum_probs=197.6
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC--CCcccceeeEEE
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR--HKNIVRFLGCCW 781 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~ 781 (1058)
+.|.+.+.||+|+||.||+|....++.||||++.... ......+.+.+|++++++++ ||||+++++++.
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~---------~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~ 126 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE---------ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI 126 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTT---------CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEeccc---------ccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEe
Confidence 4599999999999999999977779999999985331 23345688999999999997 599999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccc
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFG 861 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfG 861 (1058)
.++..|+||| +.+|+|.+++... ..+++..+..++.||++||+|||+. +|+||||||+|||++ ++.+||+|||
T Consensus 127 ~~~~~~lv~E-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG 199 (390)
T 2zmd_A 127 TDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFG 199 (390)
T ss_dssp CSSEEEEEEE-CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCS
T ss_pred cCCEEEEEEe-cCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecC
Confidence 9999999999 5688999999874 5788999999999999999999999 999999999999995 6899999999
Q ss_pred cceeccCCCcccccccccCcCCccCcccccc-----------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHH
Q 043053 862 LAKLVDDGDFARSSNTVAGSYGYIAPEYGYM-----------MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVD 930 (1058)
Q Consensus 862 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~ 930 (1058)
+++..............+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........+..
T Consensus 200 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~ 279 (390)
T 2zmd_A 200 IANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 279 (390)
T ss_dssp SSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH
T ss_pred ccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHH
Confidence 9987654432233445679999999998765 36888999999999999999999999754221111111
Q ss_pred HHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 043053 931 WVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKE 986 (1058)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~ 986 (1058)
..... .........+. .+.+++..||+.||++|||++|++++...
T Consensus 280 ~~~~~-----~~~~~~~~~~~------~~~~li~~~L~~dP~~Rps~~ell~hp~~ 324 (390)
T 2zmd_A 280 IIDPN-----HEIEFPDIPEK------DLQDVLKCCLKRDPKQRISIPELLAHPYV 324 (390)
T ss_dssp HHCTT-----SCCCCCCCSCH------HHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred HhCcc-----ccCCCCccchH------HHHHHHHHHcccChhhCCCHHHHhhCcCc
Confidence 11100 01111111222 23457888999999999999999987543
No 148
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.9e-38 Score=355.77 Aligned_cols=253 Identities=23% Similarity=0.307 Sum_probs=192.9
Q ss_pred hhccccceeccccceEEEEEEe----cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 704 KCLVDANVIGKGCSGVVYRADM----DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
++|.+.+.||+|+||.||+|.. .+|+.||||++...... ........+.+|+.++++++||||++++++
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~-------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~ 89 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIV-------RNAKDTAHTKAERNILEEVKHPFIVDLIYA 89 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC---------------------HHHHHHHCCCTTBCCEEEE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhh-------hhhhHHHHHHHHHHHHHhCCCCCccceeEE
Confidence 6899999999999999999965 57999999998643211 122335678899999999999999999999
Q ss_pred EEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeec
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIAD 859 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~D 859 (1058)
+..++..|+||||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 90 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~D 164 (327)
T 3a62_A 90 FQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTD 164 (327)
T ss_dssp EECSSCEEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECC
T ss_pred EEcCCEEEEEEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEe
Confidence 99999999999999999999999864 5689999999999999999999999 999999999999999999999999
Q ss_pred cccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcc
Q 043053 860 FGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQ 939 (1058)
Q Consensus 860 fGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1058)
||+++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+....
T Consensus 165 fg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~~--- 237 (327)
T 3a62_A 165 FGLCKESIHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN--RKKTIDKILKCK--- 237 (327)
T ss_dssp CSCC------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHTC---
T ss_pred CCcccccccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC--HHHHHHHHHhCC---
Confidence 99987543322 22345679999999999999899999999999999999999999997542 112222121111
Q ss_pred ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHH
Q 043053 940 VLDPSLLSRPESEIDEMLQALGVALLCVNASPDERP-----TMKDVAAML 984 (1058)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----t~~~v~~~l 984 (1058)
.......+. .+.+++.+||+.||++|| ++.+++++-
T Consensus 238 ---~~~p~~~~~------~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp 278 (327)
T 3a62_A 238 ---LNLPPYLTQ------EARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 278 (327)
T ss_dssp ---CCCCTTSCH------HHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSG
T ss_pred ---CCCCCCCCH------HHHHHHHHHHhcCHhhccCCCCCCHHHHHcCC
Confidence 111112222 234477889999999999 677877753
No 149
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=8.3e-39 Score=358.09 Aligned_cols=254 Identities=20% Similarity=0.279 Sum_probs=181.1
Q ss_pred Hhhcccc---ceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC-CCccccee
Q 043053 703 LKCLVDA---NVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR-HKNIVRFL 777 (1058)
Q Consensus 703 ~~~~~~~---~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~ 777 (1058)
.++|.+. +.||+|+||+||+| +..+++.||||++... ....+.+|+.+++++. ||||++++
T Consensus 7 ~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--------------~~~~~~~e~~~l~~l~~h~niv~~~ 72 (325)
T 3kn6_A 7 YQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--------------MEANTQKEITALKLCEGHPNIVKLH 72 (325)
T ss_dssp HHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--------------GHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh--------------hhhhHHHHHHHHHHhcCCCCeeEEE
Confidence 4556654 78999999999999 5567999999998422 2467889999999997 99999999
Q ss_pred eEEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCC---C
Q 043053 778 GCCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEF---E 854 (1058)
Q Consensus 778 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~---~ 854 (1058)
+++.++...|+||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++ .
T Consensus 73 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 147 (325)
T 3kn6_A 73 EVFHDQLHTFLVMELLNGGELFERIKKK--KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLE 147 (325)
T ss_dssp EEEECSSEEEEEECCCCSCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CE
T ss_pred EEEEcCCEEEEEEEccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCccc
Confidence 9999999999999999999999999873 6799999999999999999999999 999999999999998766 8
Q ss_pred eeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCC--ChhHHHHH
Q 043053 855 PYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPD--GSHVVDWV 932 (1058)
Q Consensus 855 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~--~~~~~~~~ 932 (1058)
+||+|||+++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||...... ........
T Consensus 148 ~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~ 225 (325)
T 3kn6_A 148 IKIIDFGFARLKPPDN--QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM 225 (325)
T ss_dssp EEECCCTTCEECCC------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHH
T ss_pred EEEeccccceecCCCC--CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHH
Confidence 9999999998765432 2334567899999999999999999999999999999999999999754321 11112222
Q ss_pred HhhcCcc-ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 933 RQKKGIQ-VLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 933 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
....... ..........+ ..+.+++..||+.||++|||+++++++
T Consensus 226 ~~i~~~~~~~~~~~~~~~s------~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 226 KKIKKGDFSFEGEAWKNVS------QEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHTTTCCCCCSHHHHTSC------HHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred HHHHcCCCCCCcccccCCC------HHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 2211110 00000000111 234457888999999999999999764
No 150
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.3e-38 Score=372.85 Aligned_cols=262 Identities=19% Similarity=0.245 Sum_probs=204.1
Q ss_pred hhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCC-CcccceeeEEE
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRH-KNIVRFLGCCW 781 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~ 781 (1058)
++|.+.++||+|+||.||+|. ..+++.||||++... ....++.+|+++++.++| ++|..+..++.
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-------------~~~~~~~~E~~il~~L~~~~~i~~i~~~~~ 73 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-------------TKHPQLLYESKIYRILQGGTGIPNVRWFGV 73 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETT-------------CSSCCHHHHHHHHHHTTTSTTCCCEEEEEE
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccc-------------cccHHHHHHHHHHHHhcCCCCCCeEEEEEe
Confidence 679999999999999999994 578999999986422 112457899999999987 55666666667
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEE---cCCCCeeee
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILI---GLEFEPYIA 858 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill---~~~~~~kl~ 858 (1058)
..+..++||||+ +++|.+++... ...+++..++.|+.||+.||+|||+. +||||||||+|||+ +.++.+||+
T Consensus 74 ~~~~~~lvme~~-g~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~ 148 (483)
T 3sv0_A 74 EGDYNVLVMDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYII 148 (483)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEEC
T ss_pred eCCEEEEEEECC-CCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEE
Confidence 778889999999 99999999854 46799999999999999999999999 99999999999999 688999999
Q ss_pred ccccceeccCCCcc-----cccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCh-hHHHHH
Q 043053 859 DFGLAKLVDDGDFA-----RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGS-HVVDWV 932 (1058)
Q Consensus 859 DfGl~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~-~~~~~~ 932 (1058)
|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .....+
T Consensus 149 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i 228 (483)
T 3sv0_A 149 DFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI 228 (483)
T ss_dssp CCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHH
T ss_pred eCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHH
Confidence 99999877654321 123366799999999999999999999999999999999999999986543321 111111
Q ss_pred HhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 933 RQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
...... .....+....+. ++..++..||+.||++||++++|++.|+++...
T Consensus 229 ~~~~~~-~~~~~l~~~~p~------~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 229 SEKKVA-TSIEALCRGYPT------EFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp HHHHHH-SCHHHHHTTSCH------HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred hhcccc-ccHHHHhcCCcH------HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 111100 000111112222 234577889999999999999999999987554
No 151
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=351.69 Aligned_cols=249 Identities=23% Similarity=0.282 Sum_probs=193.3
Q ss_pred HHhhccccceeccccceEEEEEEe-cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccceeeE
Q 043053 702 VLKCLVDANVIGKGCSGVVYRADM-DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVRFLGC 779 (1058)
Q Consensus 702 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~ 779 (1058)
..++|...++||+|+||+||+|.. .+|+.||||++.... ........+..|+..+.++ +||||++++++
T Consensus 55 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~ 125 (311)
T 3p1a_A 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPF---------RGPKDRARKLAEVGSHEKVGQHPCCVRLEQA 125 (311)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSC---------CSHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred hhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccc---------cChHHHHHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 457899999999999999999954 589999999875331 2223344555666666555 89999999999
Q ss_pred EEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeec
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIAD 859 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~D 859 (1058)
+.+++..++||||+ +|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 126 ~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~D 200 (311)
T 3p1a_A 126 WEEGGILYLQTELC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGD 200 (311)
T ss_dssp EEETTEEEEEEECC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECC
T ss_pred EEeCCEEEEEEecc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEcc
Confidence 99999999999999 67999998765 46799999999999999999999999 999999999999999999999999
Q ss_pred cccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcc
Q 043053 860 FGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQ 939 (1058)
Q Consensus 860 fGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1058)
||+++...... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+... .....+...
T Consensus 201 FG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~-----~~~~~~~~~---- 267 (311)
T 3p1a_A 201 FGLLVELGTAG---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG-----EGWQQLRQG---- 267 (311)
T ss_dssp CTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH-----HHHHHHTTT----
T ss_pred ceeeeecccCC---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc-----cHHHHHhcc----
Confidence 99998765432 2345569999999998876 7899999999999999999997766421 111111111
Q ss_pred ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 940 VLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
...+......+. .+.+++.+||++||++|||++|++++
T Consensus 268 ~~~~~~~~~~~~------~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 268 YLPPEFTAGLSS------ELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp CCCHHHHTTSCH------HHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCCcccccCCCH------HHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 111111112222 23457888999999999999999874
No 152
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=5.9e-39 Score=353.85 Aligned_cols=251 Identities=18% Similarity=0.332 Sum_probs=199.3
Q ss_pred hhccccceeccccceEEEEEE-ecCC-------cEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccc
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNG-------EVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVR 775 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~-------~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 775 (1058)
++|.+.+.||+|+||+||+|. ..++ ..||+|++... .....+.+.+|++++++++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~-----------~~~~~~~~~~E~~~l~~l~h~~iv~ 76 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA-----------HRNYSESFFEAASMMSKLSHKHLVL 76 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG-----------GGGGHHHHHHHHHHHHTSCCTTBCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc-----------cHHHHHHHHHHHHHHHhCCCCCEeE
Confidence 578999999999999999994 3344 47999988432 2344678999999999999999999
Q ss_pred eeeEEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCC-
Q 043053 776 FLGCCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFE- 854 (1058)
Q Consensus 776 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~- 854 (1058)
+++++.+++..++||||+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 77 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~ 152 (289)
T 4fvq_A 77 NYGVCVCGDENILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDR 152 (289)
T ss_dssp EEEEECCTTCCEEEEECCTTCBHHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBG
T ss_pred EEEEEEeCCCCEEEEECCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcc
Confidence 999999999999999999999999999864 34589999999999999999999999 9999999999999998887
Q ss_pred -------eeeeccccceeccCCCcccccccccCcCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCCh
Q 043053 855 -------PYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGS 926 (1058)
Q Consensus 855 -------~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 926 (1058)
+||+|||++..... .....||+.|+|||++.+ ..++.++||||+|+++|||++|..|+..... ..
T Consensus 153 ~~~~~~~~kl~Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~-~~ 225 (289)
T 4fvq_A 153 KTGNPPFIKLSDPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD-SQ 225 (289)
T ss_dssp GGTBCCEEEECCCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-HH
T ss_pred cccccceeeeccCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc-hH
Confidence 99999999865432 123458899999999887 6789999999999999999996555443221 11
Q ss_pred hHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhh
Q 043053 927 HVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKH 989 (1058)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~ 989 (1058)
......... .......+.. +.+++..||+.||++|||+++++++|+++..
T Consensus 226 ~~~~~~~~~-------~~~~~~~~~~------l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 226 RKLQFYEDR-------HQLPAPKAAE------LANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp HHHHHHHTT-------CCCCCCSSCT------THHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred HHHHHhhcc-------CCCCCCCCHH------HHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 111111111 1111111222 2347778999999999999999999988764
No 153
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.1e-40 Score=364.46 Aligned_cols=265 Identities=28% Similarity=0.369 Sum_probs=188.2
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcc--cCCCcccceeeEEE
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGS--IRHKNIVRFLGCCW 781 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~ 781 (1058)
++|.+.+.||+|+||.||+|... |+.||||++... ....+.+|.+++.. ++||||+++++++.
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--------------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~ 67 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--------------EERSWFREAEIYQTVMLRHENILGFIAADN 67 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T--------------THHHHHHHHHHHTSTTCCC-CBCCEEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc--------------chhhHHHHHHHHHHHhccCcceeeeeeecc
Confidence 67999999999999999999765 899999998422 24567788888888 78999999999998
Q ss_pred cCC----CceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhccc--------ccCCCCeEeCCCCCCcEEE
Q 043053 782 NRN----NRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLH--------HDCVPPIVHRDIKANNILI 849 (1058)
Q Consensus 782 ~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivHrDikp~Nill 849 (1058)
... ..++||||+++|+|.++++. ..+++..++.++.|++.|++||| +. +|+||||||+||++
T Consensus 68 ~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~ 141 (303)
T 3gxj_A 68 KDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILV 141 (303)
T ss_dssp EECSSSEEEEEEEECCTTCCHHHHHHH---CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-C
T ss_pred cCCCccceeEEEEeccCCCCHHHHHhc---cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEE
Confidence 776 67999999999999999975 46788889999999999999999 77 99999999999999
Q ss_pred cCCCCeeeeccccceeccCCCcc--cccccccCcCCccCccccccC------CCCcccchhhHHHHHHHHHhC-------
Q 043053 850 GLEFEPYIADFGLAKLVDDGDFA--RSSNTVAGSYGYIAPEYGYMM------KITEKSDVYSYGVVVLEVLTG------- 914 (1058)
Q Consensus 850 ~~~~~~kl~DfGl~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvvl~elltg------- 914 (1058)
+.++.+||+|||+++........ .......||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 142 ~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~ 221 (303)
T 3gxj_A 142 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 221 (303)
T ss_dssp CTTCCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC
T ss_pred CCCCCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCcccc
Confidence 99999999999999766543321 122344799999999998765 344689999999999999999
Q ss_pred ---CCCCCCCCCCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043053 915 ---KQPIDPTIPDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHER 991 (1058)
Q Consensus 915 ---~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~ 991 (1058)
..||....+............ ......+....... .......+.+++.+||+.||++|||++++++.|+++..+.
T Consensus 222 ~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 222 EDYQLPYYDLVPSDPSVEEMRKVV-CEQKLRPNIPNRWQ-SCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp -CCCCTTTTTCC-CCCCC-CHHHH-TTSCCCCCCCGGGG-SSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred ceeeccccccCCCCccHHHHHHHH-HHhhcCCCcccccc-chhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 677755432211111111111 11111222211111 1122234456899999999999999999999999887643
No 154
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.3e-38 Score=351.12 Aligned_cols=268 Identities=21% Similarity=0.250 Sum_probs=199.0
Q ss_pred HHHHhhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceee
Q 043053 700 EQVLKCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLG 778 (1058)
Q Consensus 700 ~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~ 778 (1058)
....++|.+.+.||+|+||.||+|. ..+++.||||++..... ......+.+.+|+.++++++||||+++++
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--------~~~~~~~~~~~e~~~l~~l~hp~iv~~~~ 101 (309)
T 2h34_A 30 GTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLS--------SDPVFRTRMQREARTAGRLQEPHVVPIHD 101 (309)
T ss_dssp ----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGG--------GSHHHHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred CcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccc--------cCHHHHHHHHHHHHHHhhcCCCCeeEEEE
Confidence 3456789999999999999999995 45789999999854321 23344678999999999999999999999
Q ss_pred EEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeee
Q 043053 779 CCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIA 858 (1058)
Q Consensus 779 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~ 858 (1058)
++..++..++||||+++++|.+++... ..+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 102 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~ 176 (309)
T 2h34_A 102 FGEIDGQLYVDMRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLV 176 (309)
T ss_dssp EEEETTEEEEEEECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred EEeeCCeEEEEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEe
Confidence 999999999999999999999999864 5689999999999999999999999 99999999999999999999999
Q ss_pred ccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCc
Q 043053 859 DFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGI 938 (1058)
Q Consensus 859 DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1058)
|||++........ .......|++.|+|||++.+..++.++||||||+++|||++|+.||..... ......+....
T Consensus 177 Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~-- 251 (309)
T 2h34_A 177 DFGIASATTDEKL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL--SVMGAHINQAI-- 251 (309)
T ss_dssp SCCC-----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH--HHHHHHHHSCC--
T ss_pred cCccCcccccccc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH--HHHHHHhccCC--
Confidence 9999986654322 223355699999999999998999999999999999999999999975321 11111111110
Q ss_pred cccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHHhhhhhhh
Q 043053 939 QVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERP-TMKDVAAMLKEIKHERE 992 (1058)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-t~~~v~~~l~~~~~~~~ 992 (1058)
..........+.. +..++.+||+.||++|| +++++++.+++......
T Consensus 252 -~~~~~~~~~~~~~------l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 252 -PRPSTVRPGIPVA------FDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp -CCGGGTSTTCCTH------HHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred -CCccccCCCCCHH------HHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 0011112222332 23467789999999999 99999999987755443
No 155
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4e-38 Score=346.23 Aligned_cols=256 Identities=21% Similarity=0.272 Sum_probs=205.2
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.++|.+.+.||+|+||.||+| +..+|+.||+|++.... ......+.+.+|+.++++++||||+++++++.
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 75 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK---------LSARDFQKLEREARICRKLQHPNIVRLHDSIQ 75 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG---------CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeeccc---------CCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEE
Confidence 368999999999999999999 55679999999985432 12334578899999999999999999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCC---eeee
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFE---PYIA 858 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~---~kl~ 858 (1058)
+++..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+
T Consensus 76 ~~~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~ 150 (284)
T 3kk8_A 76 EESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLA 150 (284)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEEC
T ss_pred cCCEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEe
Confidence 999999999999999999998764 5689999999999999999999999 9999999999999987665 9999
Q ss_pred ccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCc
Q 043053 859 DFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGI 938 (1058)
Q Consensus 859 DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1058)
|||.+....... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... .......+.... .
T Consensus 151 Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~--~~~~~~~~~~~~-~ 224 (284)
T 3kk8_A 151 DFGLAIEVNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--QHRLYAQIKAGA-Y 224 (284)
T ss_dssp CCTTCEECCSSC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHTC-C
T ss_pred eceeeEEcccCc---cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc--hhHHHHHHHhcc-c
Confidence 999998765432 2335679999999999999999999999999999999999999997542 222222222111 1
Q ss_pred cccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 043053 939 QVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLK 985 (1058)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~ 985 (1058)
. .........+. .+.+++..||+.||++|||++|++++-.
T Consensus 225 ~-~~~~~~~~~~~------~~~~li~~~l~~dp~~Rps~~~~l~h~~ 264 (284)
T 3kk8_A 225 D-YPSPEWDTVTP------EAKSLIDSMLTVNPKKRITADQALKVPW 264 (284)
T ss_dssp C-CCTTTTTTSCH------HHHHHHHHHSCSSTTTSCCHHHHTTSHH
T ss_pred c-CCchhhcccCH------HHHHHHHHHcccChhhCCCHHHHhcCcc
Confidence 1 11111112222 2334778899999999999999998543
No 156
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=354.95 Aligned_cols=268 Identities=21% Similarity=0.257 Sum_probs=200.1
Q ss_pred HHhhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC---CCccccee
Q 043053 702 VLKCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR---HKNIVRFL 777 (1058)
Q Consensus 702 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~ 777 (1058)
..++|.+.+.||+|+||+||+|. ..+++.||||++...... .........+.+|+.++++++ ||||++++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~ 80 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGG------GGGGGLPISTVREVALLRRLEAFEHPNVVRLM 80 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCC------TTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEE
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEeccccc------ccccccchhHHHHHHHHHHHhhcCCCCeEEee
Confidence 34789999999999999999995 567999999998543211 112223456778888877775 99999999
Q ss_pred eEEEcCC-----CceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCC
Q 043053 778 GCCWNRN-----NRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLE 852 (1058)
Q Consensus 778 ~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~ 852 (1058)
+++.... ..++||||+. |+|.+++.......+++..++.++.|+++||+|||+. +|+||||||+||+++.+
T Consensus 81 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~ 156 (308)
T 3g33_A 81 DVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSG 156 (308)
T ss_dssp EEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTT
T ss_pred eeeeccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCC
Confidence 9998755 3689999997 5999999876556699999999999999999999999 99999999999999999
Q ss_pred CCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHH
Q 043053 853 FEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWV 932 (1058)
Q Consensus 853 ~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~ 932 (1058)
+.+||+|||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .......
T Consensus 157 ~~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~ 232 (308)
T 3g33_A 157 GTVKLADFGLARIYSYQ---MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIF 232 (308)
T ss_dssp SCEEECSCSCTTTSTTC---CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH-HHHHHHH
T ss_pred CCEEEeeCccccccCCC---cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence 99999999999866433 2334567999999999999999999999999999999999999999754221 1111111
Q ss_pred HhhcCc--cccC-------CCCCCCCchhHHH-----HHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 933 RQKKGI--QVLD-------PSLLSRPESEIDE-----MLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 933 ~~~~~~--~~~~-------~~~~~~~~~~~~~-----~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
...... .... .......+..... ...+.+++.+||+.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 233 DLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp HHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 111000 0000 0000000000000 0123457888999999999999999875
No 157
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.9e-38 Score=356.28 Aligned_cols=263 Identities=23% Similarity=0.347 Sum_probs=206.0
Q ss_pred hhccccceeccccceEEEEEEe------cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCccccee
Q 043053 704 KCLVDANVIGKGCSGVVYRADM------DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFL 777 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 777 (1058)
++|.+.+.||+|+||.||+|.. .+++.||||++... .......++.+|+.++++++||||++++
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 99 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV----------CSEQDELDFLMEALIISKFNHQNIVRCI 99 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS----------CCHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc----------cchhhHHHHHHHHHHHhhCCCCCCCeEE
Confidence 6899999999999999999963 35778999998532 2334457889999999999999999999
Q ss_pred eEEEcCCCceEEEEecCCCChhhhhhhcCC-----CCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCC
Q 043053 778 GCCWNRNNRLLMYDYMPNGSLGSLLHERTG-----NALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLE 852 (1058)
Q Consensus 778 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~ 852 (1058)
+++.+....|+||||+++|+|.+++..... ..+++..++.++.|+++||+|||+. +|+||||||+||+++.+
T Consensus 100 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~ 176 (327)
T 2yfx_A 100 GVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP 176 (327)
T ss_dssp EEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCS
T ss_pred EEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecC
Confidence 999999999999999999999999986432 4589999999999999999999999 99999999999999844
Q ss_pred ---CCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhH
Q 043053 853 ---FEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHV 928 (1058)
Q Consensus 853 ---~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~ 928 (1058)
..+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |+.||... .....
T Consensus 177 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~~~ 254 (327)
T 2yfx_A 177 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--SNQEV 254 (327)
T ss_dssp STTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHH
T ss_pred CCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc--CHHHH
Confidence 4699999999986654443334445678999999999998899999999999999999998 99999754 22223
Q ss_pred HHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043053 929 VDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHERE 992 (1058)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~~ 992 (1058)
...+..... +......+. .+..++..||+.||++||++++++++++.+.....
T Consensus 255 ~~~~~~~~~-----~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~ 307 (327)
T 2yfx_A 255 LEFVTSGGR-----MDPPKNCPG------PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 307 (327)
T ss_dssp HHHHHTTCC-----CCCCTTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred HHHHhcCCC-----CCCCCCCCH------HHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence 332222211 111112222 23347788999999999999999999998876544
No 158
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.1e-38 Score=374.01 Aligned_cols=257 Identities=19% Similarity=0.265 Sum_probs=204.4
Q ss_pred hhccccceeccccceEEEEEEe-cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRADM-DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|...++||+|+||.||+|.. .+|+.||||++.+... ......+.+.+|++++++++||||+++++++.+
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~--------~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~ 256 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRL--------KKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET 256 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHH--------HHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHh--------hhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee
Confidence 5788899999999999999954 5799999999864432 122335788999999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcC--CCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERT--GNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADF 860 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~Df 860 (1058)
.+..|+||||++||+|.+++.... ...+++..++.++.||+.||+|||+. +|+||||||+|||++.+|.+||+||
T Consensus 257 ~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DF 333 (543)
T 3c4z_A 257 KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDL 333 (543)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeec
Confidence 999999999999999999997643 45799999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccc
Q 043053 861 GLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQV 940 (1058)
Q Consensus 861 Gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1058)
|+++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||........ ...........
T Consensus 334 Gla~~~~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~-~~~~~~~i~~~-- 408 (543)
T 3c4z_A 334 GLAVELKAGQ--TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELKQRVLEQ-- 408 (543)
T ss_dssp TTCEECCTTC--CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC-HHHHHHHHHHC--
T ss_pred ceeeeccCCC--cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh-HHHHHHHHhhc--
Confidence 9998765433 223456899999999999999999999999999999999999999976532211 11111111100
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 043053 941 LDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTM-----KDVAAM 983 (1058)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~-----~~v~~~ 983 (1058)
........+. .+.+++..||+.||++||++ +++.++
T Consensus 409 -~~~~p~~~s~------~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 409 -AVTYPDKFSP------ASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp -CCCCCTTSCH------HHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred -ccCCCcccCH------HHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 1111122222 23347778999999999975 566553
No 159
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.2e-38 Score=349.50 Aligned_cols=250 Identities=26% Similarity=0.409 Sum_probs=200.7
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|.+.+.||+|+||.||+| +..+++.||||++..... ........+.+|+.++++++||||+++++++.+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 80 (279)
T 3fdn_A 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--------EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD 80 (279)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH--------HHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEecccc--------chhhHHHHHHHHHHHHHcCCCCCCcchhheEec
Confidence 67999999999999999999 556788999999854321 122345788999999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
.+..++||||+++|+|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~ 155 (279)
T 3fdn_A 81 ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGW 155 (279)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCE
T ss_pred CCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccc
Confidence 99999999999999999999864 5689999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccccC
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVLD 942 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1058)
+...... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... .......+... .
T Consensus 156 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~------~ 223 (279)
T 3fdn_A 156 SVHAPSS----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--YQETYKRISRV------E 223 (279)
T ss_dssp ESCC------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHHHT------C
T ss_pred cccCCcc----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc--HHHHHHHHHhC------C
Confidence 8654432 2235578999999999999999999999999999999999999997432 11111111111 1
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 943 PSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
.......+.. +.+++..||+.||++|||++|++++-
T Consensus 224 ~~~~~~~~~~------~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 224 FTFPDFVTEG------ARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp CCCCTTSCHH------HHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred CCCCCcCCHH------HHHHHHHHhccChhhCCCHHHHhhCc
Confidence 1111122222 23477889999999999999999864
No 160
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=4.2e-38 Score=351.32 Aligned_cols=262 Identities=23% Similarity=0.378 Sum_probs=197.2
Q ss_pred hhccccceeccccceEEEEEEec----CCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 704 KCLVDANVIGKGCSGVVYRADMD----NGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
++|.+.+.||+|+||.||+|... +++.||||++.... ......+.+.+|+.++++++||||++++++
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 104 (313)
T 3brb_A 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN---------SSQREIEEFLSEAACMKDFSHPNVIRLLGV 104 (313)
T ss_dssp GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---C---------CCHHHHHHHHHHHHHHHTCCCTTBCCCCEE
T ss_pred HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccc---------cchhHHHHHHHHHHHHhcCCCCCeeeeeEE
Confidence 67899999999999999999443 35589999985331 233445789999999999999999999999
Q ss_pred EEcCCC-----ceEEEEecCCCChhhhhhhc----CCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEc
Q 043053 780 CWNRNN-----RLLMYDYMPNGSLGSLLHER----TGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIG 850 (1058)
Q Consensus 780 ~~~~~~-----~~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~ 850 (1058)
+.+... .++||||+++|+|.+++... ....+++..++.++.|+++||+|||+. +|+||||||+||+++
T Consensus 105 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~ 181 (313)
T 3brb_A 105 CIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLR 181 (313)
T ss_dssp EEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEEC
T ss_pred EeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEc
Confidence 987553 49999999999999998532 246799999999999999999999999 999999999999999
Q ss_pred CCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHH
Q 043053 851 LEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVV 929 (1058)
Q Consensus 851 ~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~ 929 (1058)
.++.+||+|||+++...............+++.|+|||++.+..++.++||||||+++|||++ |..||..... ....
T Consensus 182 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~ 259 (313)
T 3brb_A 182 DDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN--HEMY 259 (313)
T ss_dssp TTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHH
T ss_pred CCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH--HHHH
Confidence 999999999999987655443334445567889999999999999999999999999999999 8899975422 2232
Q ss_pred HHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 930 DWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
..+.... .+......+. .+..++..||+.||++|||+++++++|+++...
T Consensus 260 ~~~~~~~-----~~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 260 DYLLHGH-----RLKQPEDCLD------ELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp HHHHTTC-----CCCCBTTCCH------HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHcCC-----CCCCCccccH------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 2222211 1111122222 234477889999999999999999999988654
No 161
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-38 Score=353.66 Aligned_cols=263 Identities=26% Similarity=0.415 Sum_probs=202.0
Q ss_pred hhccccceeccccceEEEEEEecC-----CcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceee
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDN-----GEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLG 778 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~ 778 (1058)
++|...+.||+|+||.||+|.... +..||||++... ........+.+|+.++++++||||+++++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 113 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG----------YTEKQRVDFLGEAGIMGQFSHHNIIRLEG 113 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT----------CCHHHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCC----------CCHHHHHHHHHHHHHHHhCCCCCCCcEEE
Confidence 567888999999999999995432 245999998532 23344668999999999999999999999
Q ss_pred EEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeee
Q 043053 779 CCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIA 858 (1058)
Q Consensus 779 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~ 858 (1058)
++.+.+..++||||+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 114 ~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~ 189 (333)
T 1mqb_A 114 VISKYKPMMIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVS 189 (333)
T ss_dssp EECSSSSEEEEEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEEC
T ss_pred EEecCCCcEEEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEEC
Confidence 999999999999999999999999864 46789999999999999999999999 99999999999999999999999
Q ss_pred ccccceeccCCCc-ccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhc
Q 043053 859 DFGLAKLVDDGDF-ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKK 936 (1058)
Q Consensus 859 DfGl~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 936 (1058)
|||+++....... ........+|+.|+|||++.+..++.++||||||+++|||++ |+.||.... .......+....
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~--~~~~~~~~~~~~ 267 (333)
T 1mqb_A 190 DFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS--NHEVMKAINDGF 267 (333)
T ss_dssp CCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--HHHHHHHHHTTC
T ss_pred CCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHHCCC
Confidence 9999987654321 112223446789999999998899999999999999999999 999997542 222222222211
Q ss_pred CccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhhhh
Q 043053 937 GIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHEREE 993 (1058)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~~~ 993 (1058)
........+. + +..++.+||+.||++||+++++++.|+++......
T Consensus 268 -----~~~~~~~~~~---~---l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 313 (333)
T 1mqb_A 268 -----RLPTPMDCPS---A---IYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313 (333)
T ss_dssp -----CCCCCTTCBH---H---HHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred -----cCCCcccCCH---H---HHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 1111112222 2 33477889999999999999999999988765443
No 162
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=4.7e-38 Score=345.04 Aligned_cols=261 Identities=23% Similarity=0.356 Sum_probs=205.1
Q ss_pred hhccccceeccccceEEEEEEecC----CcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDN----GEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
++|...+.||+|+||.||+|.... +..||||++... ......+.+.+|+.++++++||||++++++
T Consensus 12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 81 (281)
T 3cc6_A 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD----------CTLDNKEKFMSEAVIMKNLDHPHIVKLIGI 81 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTT----------SCHHHHHHHHHHHHHHHHHCCTTBCCEEEE
T ss_pred cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccc----------cCchHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 678999999999999999995432 346999998533 223346789999999999999999999999
Q ss_pred EEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeec
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIAD 859 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~D 859 (1058)
+.+ +..++||||+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 82 ~~~-~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 156 (281)
T 3cc6_A 82 IEE-EPTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGD 156 (281)
T ss_dssp ECS-SSCEEEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECC
T ss_pred EcC-CCCEEEEecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCc
Confidence 864 4578999999999999999764 45689999999999999999999999 999999999999999999999999
Q ss_pred cccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcCc
Q 043053 860 FGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKGI 938 (1058)
Q Consensus 860 fGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1058)
||++........ .......+|+.|+|||+..+..++.++||||||+++|||++ |+.||..... ......+.....
T Consensus 157 fg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~--~~~~~~~~~~~~- 232 (281)
T 3cc6_A 157 FGLSRYIEDEDY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN--KDVIGVLEKGDR- 232 (281)
T ss_dssp CCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG--GGHHHHHHHTCC-
T ss_pred cCCCcccccccc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh--HHHHHHHhcCCC-
Confidence 999987654332 22334557889999999998899999999999999999998 9999975422 233333322211
Q ss_pred cccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhhhh
Q 043053 939 QVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHEREE 993 (1058)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~~~ 993 (1058)
.......+. .+..++..||+.||++|||+.++++.|+++.....+
T Consensus 233 ----~~~~~~~~~------~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 277 (281)
T 3cc6_A 233 ----LPKPDLCPP------VLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 277 (281)
T ss_dssp ----CCCCTTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred ----CCCCCCCCH------HHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhhh
Confidence 111111222 233477889999999999999999999998765443
No 163
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.6e-38 Score=345.25 Aligned_cols=255 Identities=23% Similarity=0.257 Sum_probs=203.7
Q ss_pred HHHHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceee
Q 043053 700 EQVLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLG 778 (1058)
Q Consensus 700 ~~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~ 778 (1058)
.++.++|.+.+.||+|+||.||+| +..++..||+|++.... ....+.+.+|++++++++||||+++++
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-----------~~~~~~~~~E~~~l~~l~h~~i~~~~~ 73 (277)
T 3f3z_A 5 GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF-----------VEDVDRFKQEIEIMKSLDHPNIIRLYE 73 (277)
T ss_dssp -CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-----------CSCHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred hhhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc-----------cchHHHHHHHHHHHHhCCCCCEeeEEE
Confidence 356789999999999999999999 55568899999985331 223578999999999999999999999
Q ss_pred EEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEE---cCCCCe
Q 043053 779 CCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILI---GLEFEP 855 (1058)
Q Consensus 779 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill---~~~~~~ 855 (1058)
++.++...++||||+++++|.+++... ..+++..++.++.|+++||+|||+. +|+||||||+||++ +.++.+
T Consensus 74 ~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~ 148 (277)
T 3f3z_A 74 TFEDNTDIYLVMELCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPL 148 (277)
T ss_dssp EEECSSEEEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCE
T ss_pred EEecCCeEEEEEeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcE
Confidence 999999999999999999999999764 5689999999999999999999999 99999999999999 788899
Q ss_pred eeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhh
Q 043053 856 YIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQK 935 (1058)
Q Consensus 856 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 935 (1058)
||+|||++....... ......||+.|+|||++.+. ++.++||||+|+++|||++|+.||.... .......+...
T Consensus 149 ~l~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~ 222 (277)
T 3f3z_A 149 KLIDFGLAARFKPGK---MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPT--DSEVMLKIREG 222 (277)
T ss_dssp EECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHC
T ss_pred EEEecccceeccCcc---chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCC--HHHHHHHHHhC
Confidence 999999998765433 23455799999999987654 8999999999999999999999997542 22222222211
Q ss_pred cCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 936 KGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
. ...........+. .+.+++..||+.||++|||+.+++++-
T Consensus 223 ~--~~~~~~~~~~~~~------~~~~li~~~l~~dp~~R~s~~~~l~h~ 263 (277)
T 3f3z_A 223 T--FTFPEKDWLNVSP------QAESLIRRLLTKSPKQRITSLQALEHE 263 (277)
T ss_dssp C--CCCCHHHHTTSCH------HHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred C--CCCCchhhhcCCH------HHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 1 0011000001111 234578889999999999999998753
No 164
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3e-38 Score=347.22 Aligned_cols=255 Identities=25% Similarity=0.328 Sum_probs=197.9
Q ss_pred HHHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 701 QVLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 701 ~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
.+.++|.+.+.||+|+||+||+| +..++..||+|++... ......+.+.+|++++++++||||++++++
T Consensus 19 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~----------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~ 88 (285)
T 3is5_A 19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKD----------RSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88 (285)
T ss_dssp CHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGG----------GCCSCHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeecc----------ccchhHHHHHHHHHHHHhCCCchHHhHHHh
Confidence 45689999999999999999999 5567899999998543 122346789999999999999999999999
Q ss_pred EEcCCCceEEEEecCCCChhhhhhhc--CCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEE---cCCCC
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSLLHER--TGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILI---GLEFE 854 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill---~~~~~ 854 (1058)
+.+....++||||+++|+|.+++... ....+++..++.++.|+++||+|||+. +|+||||||+||++ +.++.
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~ 165 (285)
T 3is5_A 89 FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSP 165 (285)
T ss_dssp EECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCC
T ss_pred eecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCC
Confidence 99999999999999999999998653 246799999999999999999999999 99999999999999 45678
Q ss_pred eeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHh
Q 043053 855 PYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQ 934 (1058)
Q Consensus 855 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~ 934 (1058)
+||+|||+++...... ......||+.|+|||++. ..++.++||||+|+++|||++|+.||..... .........
T Consensus 166 ~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~--~~~~~~~~~ 239 (285)
T 3is5_A 166 IKIIDFGLAELFKSDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL--EEVQQKATY 239 (285)
T ss_dssp EEECCCCCCCC-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH
T ss_pred EEEEeeecceecCCcc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH--HHHHhhhcc
Confidence 9999999998665432 234567999999999875 4688999999999999999999999975421 122111111
Q ss_pred hcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 935 KKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 935 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
... ..... ....+ . .+.+++..||+.||++|||++|++++
T Consensus 240 ~~~--~~~~~-~~~~~---~---~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 240 KEP--NYAVE-CRPLT---P---QAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp CCC--CCCC---CCCC---H---HHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred CCc--ccccc-cCcCC---H---HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 110 01100 01111 1 23357888999999999999999864
No 165
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=347.94 Aligned_cols=253 Identities=25% Similarity=0.369 Sum_probs=183.7
Q ss_pred HhhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.++|.+.+.||+|+||.||+|. ..+|+.||||++..... ......+.+.+|+.++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 81 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAM--------YKAGMVQRVQNEVKIHCQLKHPSILELYNYFE 81 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH--------HHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhh--------hhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEc
Confidence 4689999999999999999995 46899999999854321 12233578999999999999999999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccc
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFG 861 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfG 861 (1058)
+.+..++||||+++++|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 82 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg 157 (278)
T 3cok_A 82 DSNYVYLVLEMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFG 157 (278)
T ss_dssp CSSEEEEEEECCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCT
T ss_pred cCCeEEEEEecCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeec
Confidence 999999999999999999999864 36789999999999999999999999 99999999999999999999999999
Q ss_pred cceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcccc
Q 043053 862 LAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVL 941 (1058)
Q Consensus 862 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1058)
++....... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||....... . ...... .
T Consensus 158 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~---~~~~~~---~ 227 (278)
T 3cok_A 158 LATQLKMPH--EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN--T---LNKVVL---A 227 (278)
T ss_dssp TCEECC------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------CCS---S
T ss_pred ceeeccCCC--CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH--H---HHHHhh---c
Confidence 998765332 12234568999999999998889999999999999999999999997543221 1 111110 1
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 942 DPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
+.......+. .+.+++.+||+.||++|||+++++++
T Consensus 228 ~~~~~~~~~~------~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 228 DYEMPSFLSI------EAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp CCCCCTTSCH------HHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccCCccccCH------HHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 1111111222 23457888999999999999999874
No 166
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=360.94 Aligned_cols=250 Identities=18% Similarity=0.238 Sum_probs=195.2
Q ss_pred ccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcCCCc
Q 043053 708 DANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNRNNR 786 (1058)
Q Consensus 708 ~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 786 (1058)
..+.||+|+||.||+| ...+|+.||||++... .....+.+.+|++++++++||||+++++++.+.+..
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~-----------~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 161 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTR-----------GMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDI 161 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECC-----------SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEccc-----------ccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEE
Confidence 3678999999999999 4567999999998532 123457899999999999999999999999999999
Q ss_pred eEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEE--cCCCCeeeeccccce
Q 043053 787 LLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILI--GLEFEPYIADFGLAK 864 (1058)
Q Consensus 787 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill--~~~~~~kl~DfGl~~ 864 (1058)
++||||+++|+|.+++... ...+++..++.++.||++||+|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 162 ~lv~E~~~~~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~ 237 (373)
T 2x4f_A 162 VLVMEYVDGGELFDRIIDE-SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLAR 237 (373)
T ss_dssp EEEEECCTTCEEHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCE
T ss_pred EEEEeCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCce
Confidence 9999999999999998753 35689999999999999999999999 99999999999999 567789999999998
Q ss_pred eccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccccCCC
Q 043053 865 LVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVLDPS 944 (1058)
Q Consensus 865 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 944 (1058)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+.... ....+.
T Consensus 238 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~--~~~~~~~i~~~~--~~~~~~ 310 (373)
T 2x4f_A 238 RYKPRE---KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN--DAETLNNILACR--WDLEDE 310 (373)
T ss_dssp ECCTTC---BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHHHTC--CCSCSG
T ss_pred ecCCcc---ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhcc--CCCChh
Confidence 775533 2334569999999999988889999999999999999999999997542 111111111111 111111
Q ss_pred CCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 043053 945 LLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLK 985 (1058)
Q Consensus 945 ~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~ 985 (1058)
.....+. .+.+++.+||+.||++|||++|++++-.
T Consensus 311 ~~~~~~~------~~~~li~~~L~~dp~~Rps~~e~l~hp~ 345 (373)
T 2x4f_A 311 EFQDISE------EAKEFISKLLIKEKSWRISASEALKHPW 345 (373)
T ss_dssp GGTTSCH------HHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred hhccCCH------HHHHHHHHHcCCChhhCCCHHHHhcCcC
Confidence 1111222 2345788899999999999999998543
No 167
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=358.88 Aligned_cols=253 Identities=21% Similarity=0.270 Sum_probs=203.8
Q ss_pred HHHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 701 QVLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 701 ~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
++.++|.+.+.||+|+||+||+| +..+++.||||++......... .......+.+.+|+.++++++||||++++++
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~---~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~ 97 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDC---WIEDPKLGKVTLEIAILSRVEHANIIKVLDI 97 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTS---EEEETTTEEEEHHHHHHTTCCCTTBCCEEEE
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhccccc---ccchHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 56789999999999999999999 5678999999998644221100 0011234567889999999999999999999
Q ss_pred EEcCCCceEEEEecCCC-ChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeee
Q 043053 780 CWNRNNRLLMYDYMPNG-SLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIA 858 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~ 858 (1058)
+.+.+..++||||+.+| +|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 98 ~~~~~~~~lv~e~~~~g~~l~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~ 172 (335)
T 3dls_A 98 FENQGFFQLVMEKHGSGLDLFAFIDR--HPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLI 172 (335)
T ss_dssp EECSSEEEEEEECCTTSCBHHHHHHT--CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEEC
T ss_pred EeeCCEEEEEEEeCCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEe
Confidence 99999999999999777 99999976 35699999999999999999999999 99999999999999999999999
Q ss_pred ccccceeccCCCcccccccccCcCCccCccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcC
Q 043053 859 DFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKI-TEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKG 937 (1058)
Q Consensus 859 DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 937 (1058)
|||+++...... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... ...
T Consensus 173 Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----------~~~ 238 (335)
T 3dls_A 173 DFGSAAYLERGK---LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE-----------TVE 238 (335)
T ss_dssp CCTTCEECCTTC---CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG-----------GTT
T ss_pred ecccceECCCCC---ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH-----------HHh
Confidence 999998775543 2335679999999999888776 7899999999999999999999964211 000
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 938 IQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
.. .. .....+. .+.+++..||++||++|||+++++++-
T Consensus 239 ~~-~~--~~~~~~~------~l~~li~~~L~~dP~~Rps~~ell~hp 276 (335)
T 3dls_A 239 AA-IH--PPYLVSK------ELMSLVSGLLQPVPERRTTLEKLVTDP 276 (335)
T ss_dssp TC-CC--CSSCCCH------HHHHHHHHHTCSSGGGSCCHHHHHHCT
T ss_pred hc-cC--CCcccCH------HHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 00 00 0111122 234577889999999999999999864
No 168
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.2e-39 Score=366.99 Aligned_cols=259 Identities=22% Similarity=0.231 Sum_probs=201.9
Q ss_pred hhccccceeccccceEEEEEEe-cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRADM-DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|.+.++||+|+||+||+|.. .+|+.||||++.+.... .....+.+.+|+.++..++||||+++++++.+
T Consensus 61 ~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~--------~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDML--------KRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH--------HHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhh--------hHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 6799999999999999999954 57999999998543211 12234568899999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
++..|+||||++||+|.+++... +..+++..++.++.||+.||+|||+. +||||||||+|||++.++.+||+|||+
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGl 208 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGS 208 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechh
Confidence 99999999999999999999864 35789999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccc-------cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhh
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGY-------MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQK 935 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 935 (1058)
++....... ......+||+.|+|||++. +..++.++|||||||++|||++|+.||..... ......+...
T Consensus 209 a~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~--~~~~~~i~~~ 285 (412)
T 2vd5_A 209 CLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST--AETYGKIVHY 285 (412)
T ss_dssp CEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHTH
T ss_pred heeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH--HHHHHHHHhc
Confidence 987654332 2234568999999999887 35688999999999999999999999975421 1111111111
Q ss_pred cCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCC---CCHHHHHHHHH
Q 043053 936 KGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDER---PTMKDVAAMLK 985 (1058)
Q Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~R---Pt~~~v~~~l~ 985 (1058)
.. ....+......+. .+.+++.+||. +|++| |+++|++++-.
T Consensus 286 ~~-~~~~p~~~~~~s~------~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpf 330 (412)
T 2vd5_A 286 KE-HLSLPLVDEGVPE------EARDFIQRLLC-PPETRLGRGGAGDFRTHPF 330 (412)
T ss_dssp HH-HCCCC----CCCH------HHHHHHHTTSS-CGGGCTTTTTHHHHHTSGG
T ss_pred cc-CcCCCccccCCCH------HHHHHHHHHcC-ChhhcCCCCCHHHHhcCCC
Confidence 00 0001111112222 23457788999 99998 58999987643
No 169
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=352.63 Aligned_cols=263 Identities=24% Similarity=0.357 Sum_probs=196.9
Q ss_pred HhhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.++|...+.||+|+||+||+|. ..+|+.||||++... .......+.+.+|++++++++||||+++++++.
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---------~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 72 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLES---------EDDPVIKKIALREIRMLKQLKHPNLVNLLEVFR 72 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCC---------CC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecc---------ccchHHHHHHHHHHHHHHhCCCCCccchhheee
Confidence 4689999999999999999994 456999999988533 123344678899999999999999999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccc
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFG 861 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfG 861 (1058)
+++..++||||+++++|.++++. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 73 ~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 147 (311)
T 4agu_A 73 RKRRLHLVFEYCDHTVLHELDRY--QRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFG 147 (311)
T ss_dssp ETTEEEEEEECCSEEHHHHHHHT--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred cCCeEEEEEEeCCCchHHHHHhh--hcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCC
Confidence 99999999999999999998875 35689999999999999999999999 99999999999999999999999999
Q ss_pred cceeccCCCcccccccccCcCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcC---
Q 043053 862 LAKLVDDGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKG--- 937 (1058)
Q Consensus 862 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~--- 937 (1058)
+++...... .......||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||...... .....+.....
T Consensus 148 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~ 223 (311)
T 4agu_A 148 FARLLTGPS--DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV--DQLYLIRKTLGDLI 223 (311)
T ss_dssp TCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCSCC
T ss_pred CchhccCcc--cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhcccc
Confidence 998765432 22345578999999999876 66799999999999999999999999754221 11111111000
Q ss_pred ---------ccccCCCCCCCC----chhH---HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 938 ---------IQVLDPSLLSRP----ESEI---DEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 938 ---------~~~~~~~~~~~~----~~~~---~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
...........+ .... .....+.+++..||+.||++|||++|++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 224 PRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp HHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000000000000 0000 001123458889999999999999999875
No 170
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.3e-38 Score=350.52 Aligned_cols=266 Identities=19% Similarity=0.258 Sum_probs=203.4
Q ss_pred HHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEE
Q 043053 702 VLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCC 780 (1058)
Q Consensus 702 ~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 780 (1058)
+.++|.+.+.||+|+||.||+| +..+++.||||++... ...+.+.+|++++++++|++++..++++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------------~~~~~~~~e~~~l~~l~~~~~i~~~~~~ 73 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK-------------TKHPQLHIESKIYKMMQGGVGIPTIRWC 73 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----------------CCCHHHHHHHHHHHTTSTTCCCEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccc-------------ccchHHHHHHHHHHHhcCCCCCCeeeee
Confidence 4478999999999999999999 4578999999986322 1224578999999999988877777766
Q ss_pred -EcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEE---cCCCCee
Q 043053 781 -WNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILI---GLEFEPY 856 (1058)
Q Consensus 781 -~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill---~~~~~~k 856 (1058)
...+..++||||+ +|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+|
T Consensus 74 ~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~k 148 (296)
T 4hgt_A 74 GAEGDYNVMVMELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVY 148 (296)
T ss_dssp EEETTEEEEEEECC-CCBHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEE
T ss_pred cCCCCceEEEEEcc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEE
Confidence 5566779999999 99999999854 45699999999999999999999999 99999999999999 7889999
Q ss_pred eeccccceeccCCCcc-----cccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCC-hhHHH
Q 043053 857 IADFGLAKLVDDGDFA-----RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDG-SHVVD 930 (1058)
Q Consensus 857 l~DfGl~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~-~~~~~ 930 (1058)
|+|||+++........ .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... .....
T Consensus 149 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 228 (296)
T 4hgt_A 149 IIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYE 228 (296)
T ss_dssp ECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHH
T ss_pred EecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhh
Confidence 9999999877654321 12345679999999999999999999999999999999999999998653321 11111
Q ss_pred HHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043053 931 WVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHERE 992 (1058)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~~ 992 (1058)
....... ....+......+. .+..++..||+.||++|||++++++.++++..+..
T Consensus 229 ~~~~~~~-~~~~~~~~~~~~~------~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 229 RISEKKM-STPIEVLCKGYPS------EFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp HHHHHHH-HSCHHHHTTTSCH------HHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred hhhcccc-cchhhhhhccCCH------HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 1111110 0000001111222 23447788999999999999999999998876543
No 171
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-38 Score=360.29 Aligned_cols=260 Identities=25% Similarity=0.374 Sum_probs=194.4
Q ss_pred hccccceeccccceEEEEEEec--CC--cEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEE
Q 043053 705 CLVDANVIGKGCSGVVYRADMD--NG--EVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCC 780 (1058)
Q Consensus 705 ~~~~~~~lG~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 780 (1058)
.|...+.||+|+||+||+|... ++ ..||||.+... ......++|.+|+.++++++||||+++++++
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~ 159 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI----------TDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 159 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC----------SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC----------CCHHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 4677899999999999999543 22 46899987432 2334568899999999999999999999987
Q ss_pred Ec-CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeec
Q 043053 781 WN-RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIAD 859 (1058)
Q Consensus 781 ~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~D 859 (1058)
.. ++..++||||+++|+|.++++.. ...+++..++.++.||++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 160 ~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~D 235 (373)
T 3c1x_A 160 LRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVAD 235 (373)
T ss_dssp CCCSSCCEEEEECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECC
T ss_pred EcCCCCeEEEEECCCCCCHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEee
Confidence 54 45779999999999999999764 45689999999999999999999999 999999999999999999999999
Q ss_pred cccceeccCCCcc--cccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhc
Q 043053 860 FGLAKLVDDGDFA--RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKK 936 (1058)
Q Consensus 860 fGl~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 936 (1058)
||+++........ .......+|+.|+|||++.+..++.++|||||||++|||++ |..||...... .....+....
T Consensus 236 FG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~--~~~~~~~~~~ 313 (373)
T 3c1x_A 236 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGR 313 (373)
T ss_dssp C---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS--CHHHHHHTTC
T ss_pred ccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH--HHHHHHHcCC
Confidence 9999866443221 12234567889999999999999999999999999999999 67777654322 2222222221
Q ss_pred CccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043053 937 GIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHER 991 (1058)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~ 991 (1058)
. .......+. . +..++..||+.||++|||++++++.|+++....
T Consensus 314 ~-----~~~p~~~~~---~---l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~ 357 (373)
T 3c1x_A 314 R-----LLQPEYCPD---P---LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 357 (373)
T ss_dssp C-----CCCCTTCCH---H---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred C-----CCCCCCCCH---H---HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 1 111111222 2 344778899999999999999999999886543
No 172
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=4.2e-38 Score=351.80 Aligned_cols=264 Identities=26% Similarity=0.382 Sum_probs=204.7
Q ss_pred hccccceeccccceEEEEEEe-----cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 705 CLVDANVIGKGCSGVVYRADM-----DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 705 ~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
.|...+.||+|+||+||+|.+ .+++.||||++... ......+.+.+|++++++++||||++++++
T Consensus 32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 101 (318)
T 3lxp_A 32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD----------AGPQHRSGWKQEIDILRTLYHEHIIKYKGC 101 (318)
T ss_dssp GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT----------CCHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc----------cChHHHHHHHHHHHHHHhCCCcchhhEEEE
Confidence 348999999999999988743 36899999998532 233446789999999999999999999999
Q ss_pred EEcC--CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeee
Q 043053 780 CWNR--NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYI 857 (1058)
Q Consensus 780 ~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl 857 (1058)
+.+. ...++||||+++|+|.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl 175 (318)
T 3lxp_A 102 CEDAGAASLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKI 175 (318)
T ss_dssp EEETTTTEEEEEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred EecCCCceEEEEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEE
Confidence 9874 5578999999999999999763 489999999999999999999999 9999999999999999999999
Q ss_pred eccccceeccCCCc-ccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCC---------C-h
Q 043053 858 ADFGLAKLVDDGDF-ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPD---------G-S 926 (1058)
Q Consensus 858 ~DfGl~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~---------~-~ 926 (1058)
+|||+++....... ........||..|+|||++.+..++.++||||+|+++|||++|+.||...... . .
T Consensus 176 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~ 255 (318)
T 3lxp_A 176 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQM 255 (318)
T ss_dssp CCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHH
T ss_pred CCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccch
Confidence 99999987765432 12234456888999999999888999999999999999999999999643110 0 0
Q ss_pred hHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043053 927 HVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHERE 992 (1058)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~~ 992 (1058)
........... ..........+. .+.+++..||+.||++|||++++++.|+.+..+..
T Consensus 256 ~~~~~~~~~~~--~~~~~~~~~~~~------~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 256 TVLRLTELLER--GERLPRPDKCPA------EVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp HHHHHHHHHHT--TCCCCCCTTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhc--ccCCCCCccccH------HHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 00011111100 001111112222 23447788999999999999999999998876543
No 173
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.9e-38 Score=358.24 Aligned_cols=253 Identities=28% Similarity=0.405 Sum_probs=201.8
Q ss_pred HhhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.+.|...+.||+|+||+||+|. ..+|+.||||++.... .......+.+.+|++++++++||||+++++++.
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~--------~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~ 124 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG--------KQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL 124 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCS--------SCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEcccc--------ccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence 4679999999999999999994 5789999999985331 122334578999999999999999999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccc
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFG 861 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfG 861 (1058)
+++..++||||++ |+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 125 ~~~~~~lv~e~~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 199 (348)
T 1u5q_A 125 REHTAWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFG 199 (348)
T ss_dssp ETTEEEEEEECCS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCT
T ss_pred ECCeEEEEEecCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeecc
Confidence 9999999999997 5888888654 46789999999999999999999999 99999999999999999999999999
Q ss_pred cceeccCCCcccccccccCcCCccCccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCc
Q 043053 862 LAKLVDDGDFARSSNTVAGSYGYIAPEYGY---MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGI 938 (1058)
Q Consensus 862 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1058)
+++.... .....||+.|+|||++. +..++.++|||||||++|||++|+.||..... ......+....
T Consensus 200 ~a~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~--~~~~~~~~~~~-- 269 (348)
T 1u5q_A 200 SASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--MSALYHIAQNE-- 269 (348)
T ss_dssp TCBSSSS------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSC--
T ss_pred CceecCC------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHhcC--
Confidence 9976543 23457999999999874 56789999999999999999999999965421 11111111111
Q ss_pred cccCCCC-CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhh
Q 043053 939 QVLDPSL-LSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEI 987 (1058)
Q Consensus 939 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~ 987 (1058)
.+.. ....+.. +..++..||+.||++|||+++++++....
T Consensus 270 ---~~~~~~~~~~~~------l~~li~~~l~~dP~~Rps~~~ll~h~~~~ 310 (348)
T 1u5q_A 270 ---SPALQSGHWSEY------FRNFVDSCLQKIPQDRPTSEVLLKHRFVL 310 (348)
T ss_dssp ---CCCCCCTTSCHH------HHHHHHHHTCSSGGGSCCHHHHTTCHHHH
T ss_pred ---CCCCCCCCCCHH------HHHHHHHHcccChhhCcCHHHHhhChhhh
Confidence 1111 1112222 23477889999999999999999876543
No 174
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.2e-39 Score=364.05 Aligned_cols=262 Identities=17% Similarity=0.192 Sum_probs=204.3
Q ss_pred hhccccceeccccceEEEEEEec---------CCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCccc
Q 043053 704 KCLVDANVIGKGCSGVVYRADMD---------NGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIV 774 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 774 (1058)
++|.+.+.||+|+||.||+|... .++.||||++... +.+.+|++++++++||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----------------~~~~~E~~~l~~l~h~niv 105 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----------------GRLFNEQNFFQRAAKPLQV 105 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----------------STHHHHHHHHHHHCCHHHH
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----------------chHHHHHHHHHHhcccchh
Confidence 68999999999999999999554 3789999987421 4678999999999999999
Q ss_pred c---------------eeeEEEc-CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeE
Q 043053 775 R---------------FLGCCWN-RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIV 838 (1058)
Q Consensus 775 ~---------------~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iv 838 (1058)
+ +++++.. +...++||||+ +|+|.+++.......+++..++.++.||++||+|||+. +|+
T Consensus 106 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iv 181 (352)
T 2jii_A 106 NKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYV 181 (352)
T ss_dssp HHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCB
T ss_pred hhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 8 6777765 66779999999 99999999875457799999999999999999999999 999
Q ss_pred eCCCCCCcEEEcCCC--CeeeeccccceeccCCCc-----ccccccccCcCCccCccccccCCCCcccchhhHHHHHHHH
Q 043053 839 HRDIKANNILIGLEF--EPYIADFGLAKLVDDGDF-----ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEV 911 (1058)
Q Consensus 839 HrDikp~Nill~~~~--~~kl~DfGl~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~el 911 (1058)
||||||+||+++.++ .+||+|||+++....... ........||+.|+|||++.+..++.++|||||||++|||
T Consensus 182 H~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el 261 (352)
T 2jii_A 182 HGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKW 261 (352)
T ss_dssp CSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHH
Confidence 999999999999998 999999999986653221 1122345799999999999998999999999999999999
Q ss_pred HhCCCCCCCCCCCChhHHHHHHhhc-C-ccccCCCC-CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhh
Q 043053 912 LTGKQPIDPTIPDGSHVVDWVRQKK-G-IQVLDPSL-LSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIK 988 (1058)
Q Consensus 912 ltg~~P~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~ 988 (1058)
++|+.||....+............. . ........ ....+. .+..++..||+.||++|||++++++.|+++.
T Consensus 262 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 335 (352)
T 2jii_A 262 LYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSE------TLQKYLKVVMALTYEEKPPYAMLRNNLEALL 335 (352)
T ss_dssp HHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCH------HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred HhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcH------HHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence 9999999865433333333222111 1 11111000 001122 2334777899999999999999999999886
Q ss_pred hhh
Q 043053 989 HER 991 (1058)
Q Consensus 989 ~~~ 991 (1058)
.+.
T Consensus 336 ~~~ 338 (352)
T 2jii_A 336 QDL 338 (352)
T ss_dssp HHT
T ss_pred Hhc
Confidence 554
No 175
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.8e-38 Score=365.27 Aligned_cols=206 Identities=30% Similarity=0.429 Sum_probs=166.8
Q ss_pred HHHHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC-CCccccee
Q 043053 700 EQVLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR-HKNIVRFL 777 (1058)
Q Consensus 700 ~~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~ 777 (1058)
..+.++|.+.+.||+|+||.||+| +..+|+.||||++.... ......+.+.+|+.+++++. ||||++++
T Consensus 5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~---------~~~~~~~~~~~E~~~l~~l~~h~niv~l~ 75 (388)
T 3oz6_A 5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF---------QNSTDAQRTFREIMILTELSGHENIVNLL 75 (388)
T ss_dssp HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC-----------CCHHHHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc---------cChHHHHHHHHHHHHHHhccCCCCCCeee
Confidence 356789999999999999999999 56789999999985331 23344677889999999998 99999999
Q ss_pred eEEEcCC--CceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCe
Q 043053 778 GCCWNRN--NRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEP 855 (1058)
Q Consensus 778 ~~~~~~~--~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~ 855 (1058)
+++..++ ..|+||||++ |+|.++++. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+
T Consensus 76 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~ 148 (388)
T 3oz6_A 76 NVLRADNDRDVYLVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHV 148 (388)
T ss_dssp EEEECTTSSCEEEEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCE
T ss_pred eEEecCCCCEEEEEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCE
Confidence 9997654 5799999997 599999976 4689999999999999999999999 99999999999999999999
Q ss_pred eeeccccceeccCCC-------------------cccccccccCcCCccCcccccc-CCCCcccchhhHHHHHHHHHhCC
Q 043053 856 YIADFGLAKLVDDGD-------------------FARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGK 915 (1058)
Q Consensus 856 kl~DfGl~~~~~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvvl~elltg~ 915 (1058)
||+|||+++...... ........+||+.|+|||++.+ ..++.++||||+||++|||++|+
T Consensus 149 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~ 228 (388)
T 3oz6_A 149 KVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228 (388)
T ss_dssp EECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred EecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCC
Confidence 999999998754311 1122345679999999999876 67899999999999999999999
Q ss_pred CCCCCC
Q 043053 916 QPIDPT 921 (1058)
Q Consensus 916 ~P~~~~ 921 (1058)
.||...
T Consensus 229 ~pf~~~ 234 (388)
T 3oz6_A 229 PIFPGS 234 (388)
T ss_dssp CSCCCS
T ss_pred CCCCCC
Confidence 999754
No 176
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.6e-38 Score=349.46 Aligned_cols=254 Identities=20% Similarity=0.375 Sum_probs=205.5
Q ss_pred HHHHhhccccceeccccceEEEEEEe-cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceee
Q 043053 700 EQVLKCLVDANVIGKGCSGVVYRADM-DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLG 778 (1058)
Q Consensus 700 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~ 778 (1058)
..+..+|...+.||+|+||.||+|.. .+++.||||++... .+.+.+|++++++++||||+++++
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---------------~~~~~~e~~~l~~l~h~~i~~~~~ 71 (284)
T 2a19_B 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN---------------NEKAEREVKALAKLDHVNIVHYNG 71 (284)
T ss_dssp HHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECC---------------SGGGHHHHHHHHHCCCTTBCCEEE
T ss_pred chhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccc---------------cHHHHHHHHHHHhCCCCCEEEEee
Confidence 34568899999999999999999955 48999999988422 135678999999999999999999
Q ss_pred EEEc----------------CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCC
Q 043053 779 CCWN----------------RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDI 842 (1058)
Q Consensus 779 ~~~~----------------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDi 842 (1058)
++.. ....++||||+++|+|.+++.......+++..++.++.|++.||+|||+. +|+||||
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl 148 (284)
T 2a19_B 72 CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDL 148 (284)
T ss_dssp EEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred eEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccC
Confidence 8854 34469999999999999999876567899999999999999999999999 9999999
Q ss_pred CCCcEEEcCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 043053 843 KANNILIGLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTI 922 (1058)
Q Consensus 843 kp~Nill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 922 (1058)
||+||+++.++.+||+|||++....... ......||+.|+|||++.+..++.++||||||+++|||++|..|+...
T Consensus 149 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~- 224 (284)
T 2a19_B 149 KPSNIFLVDTKQVKIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET- 224 (284)
T ss_dssp SGGGEEEEETTEEEECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-
T ss_pred CHHHEEEcCCCCEEECcchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-
Confidence 9999999999999999999998765532 223456999999999999999999999999999999999999887421
Q ss_pred CCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043053 923 PDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHERE 992 (1058)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~~ 992 (1058)
......... .......+.. +..++..||+.||++|||+.+++++++.+....+
T Consensus 225 ------~~~~~~~~~-----~~~~~~~~~~------~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 225 ------SKFFTDLRD-----GIISDIFDKK------EKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp ------HHHHHHHHT-----TCCCTTSCHH------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred ------HHHHHHhhc-----ccccccCCHH------HHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 111111111 1111122222 2347788999999999999999999998876544
No 177
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3.9e-38 Score=348.57 Aligned_cols=263 Identities=19% Similarity=0.257 Sum_probs=205.0
Q ss_pred hhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEE-E
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCC-W 781 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~ 781 (1058)
++|.+.+.||+|+||.||+|. ..+|+.||||++... ...+++.+|+.++++++|++++..+.++ .
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------------~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~ 75 (296)
T 3uzp_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK-------------TKHPQLHIESKIYKMMQGGVGIPTIRWCGA 75 (296)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESC-------------SSCCHHHHHHHHHHHHTTSTTCCCEEEEEE
T ss_pred cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCC-------------cchhHHHHHHHHHHHhhcCCCCCccccccC
Confidence 689999999999999999994 578999999987422 1234689999999999998877777666 4
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEE---cCCCCeeee
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILI---GLEFEPYIA 858 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill---~~~~~~kl~ 858 (1058)
.....++||||+ +|+|.+++... ...+++..++.++.|+++||+|||++ +|+||||||+||++ +.++.+||+
T Consensus 76 ~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~ 150 (296)
T 3uzp_A 76 EGDYNVMVMELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYII 150 (296)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEEC
T ss_pred CCCceEEEEEec-CCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEe
Confidence 566679999999 89999999753 45799999999999999999999999 99999999999999 488899999
Q ss_pred ccccceeccCCCcc-----cccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCC-ChhHHHHH
Q 043053 859 DFGLAKLVDDGDFA-----RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPD-GSHVVDWV 932 (1058)
Q Consensus 859 DfGl~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~-~~~~~~~~ 932 (1058)
|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .......+
T Consensus 151 Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 230 (296)
T 3uzp_A 151 DFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI 230 (296)
T ss_dssp CCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHH
T ss_pred eCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhh
Confidence 99999876654321 1234567999999999999999999999999999999999999999864322 11222111
Q ss_pred HhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043053 933 RQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHER 991 (1058)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~ 991 (1058)
..... ....+......+. .+..++..||+.||++|||++++++.|+++..+.
T Consensus 231 ~~~~~-~~~~~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 231 SEKKM-STPIEVLCKGYPS------EFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHHH-HSCHHHHTTTSCH------HHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred ccccc-CCchHHHHhhCCH------HHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 11110 0000111112222 2344778899999999999999999999886654
No 178
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2.8e-38 Score=346.30 Aligned_cols=253 Identities=27% Similarity=0.384 Sum_probs=199.0
Q ss_pred HhhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 703 LKCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
.++|.+.+.||+|+||+||+|... |+.||||++... ...+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-------------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 85 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND-------------ATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC-------------C--HHHHHTHHHHTTCCCTTBCCEEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch-------------hHHHHHHHHHHHHHhCCCCCEeeEEEEEEc
Confidence 368999999999999999999775 899999998422 235789999999999999999999999765
Q ss_pred C-CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccc
Q 043053 783 R-NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFG 861 (1058)
Q Consensus 783 ~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfG 861 (1058)
. +..++||||+++|+|.+++.......+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg 162 (278)
T 1byg_A 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFG 162 (278)
T ss_dssp C--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCC
T ss_pred CCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecc
Confidence 4 4689999999999999999875444588999999999999999999999 99999999999999999999999999
Q ss_pred cceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcCccc
Q 043053 862 LAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKGIQV 940 (1058)
Q Consensus 862 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1058)
++...... .....+++.|+|||++.+..++.++||||+|+++|||++ |+.||.... .......+....
T Consensus 163 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~--~~~~~~~~~~~~---- 231 (278)
T 1byg_A 163 LTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKDVVPRVEKGY---- 231 (278)
T ss_dssp C-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC--GGGHHHHHTTTC----
T ss_pred cccccccc-----ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHhcCC----
Confidence 98765432 223457889999999998899999999999999999998 999997542 222222222111
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 941 LDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
.+......+.. +..++..||+.||++|||+.++++.|+++...
T Consensus 232 -~~~~~~~~~~~------l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 232 -KMDAPDGCPPA------VYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp -CCCCCTTCCHH------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCCcccCCHH------HHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 11122222222 33477789999999999999999999998754
No 179
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.7e-38 Score=358.31 Aligned_cols=198 Identities=24% Similarity=0.316 Sum_probs=176.0
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC-----CCcccce
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR-----HKNIVRF 776 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~~ 776 (1058)
.++|.+.+.||+|+||+||+| +..+++.||||++.. .....+.+..|+++++.++ ||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~------------~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN------------IKKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS------------CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc------------chhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 368999999999999999999 446789999999842 2234567788999999996 9999999
Q ss_pred eeEEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcC-----
Q 043053 777 LGCCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGL----- 851 (1058)
Q Consensus 777 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~----- 851 (1058)
++++...+..++||||+ +++|.+++.......+++..+..++.||+.||+|||+. +|+||||||+|||++.
T Consensus 102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~ 177 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEK 177 (360)
T ss_dssp EEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCE
T ss_pred cceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccc
Confidence 99999999999999999 89999999876666799999999999999999999999 9999999999999975
Q ss_pred --------------------CCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHH
Q 043053 852 --------------------EFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEV 911 (1058)
Q Consensus 852 --------------------~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~el 911 (1058)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 252 (360)
T 3llt_A 178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAEL 252 (360)
T ss_dssp EEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred cccchhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHH
Confidence 789999999999865432 2356799999999999999999999999999999999
Q ss_pred HhCCCCCCCC
Q 043053 912 LTGKQPIDPT 921 (1058)
Q Consensus 912 ltg~~P~~~~ 921 (1058)
++|+.||...
T Consensus 253 l~g~~pf~~~ 262 (360)
T 3llt_A 253 YTGSLLFRTH 262 (360)
T ss_dssp HHSSCSCCCS
T ss_pred HHCCCCCCCC
Confidence 9999999754
No 180
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=4.7e-38 Score=358.75 Aligned_cols=252 Identities=15% Similarity=0.156 Sum_probs=202.1
Q ss_pred hhccccceeccccceEEEEE------EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC---CCccc
Q 043053 704 KCLVDANVIGKGCSGVVYRA------DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR---HKNIV 774 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~------~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv 774 (1058)
++|.+.+.||+|+||+||+| +..+++.||||++... ...++.+|++++++++ |+||+
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--------------~~~~~~~e~~~~~~l~~~~~~~iv 130 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--------------NPWEFYIGTQLMERLKPSMQHMFM 130 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--------------CHHHHHHHHHHHHHSCGGGGGGBC
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--------------ChhHHHHHHHHHHHhhhhhhhhhh
Confidence 67899999999999999999 4567899999998422 2457788888888887 99999
Q ss_pred ceeeEEEcCCCceEEEEecCCCChhhhhhhc---CCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcC
Q 043053 775 RFLGCCWNRNNRLLMYDYMPNGSLGSLLHER---TGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGL 851 (1058)
Q Consensus 775 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~ 851 (1058)
++++++..++..|+||||+++|+|.++++.. ....+++..++.|+.||++||+|||+. +||||||||+|||++.
T Consensus 131 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~ 207 (365)
T 3e7e_A 131 KFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGN 207 (365)
T ss_dssp CEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECG
T ss_pred hhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecc
Confidence 9999999999999999999999999999753 246799999999999999999999999 9999999999999998
Q ss_pred -----------CCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCC
Q 043053 852 -----------EFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDP 920 (1058)
Q Consensus 852 -----------~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 920 (1058)
++.+||+|||+++..............+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 208 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 287 (365)
T 3e7e_A 208 GFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK 287 (365)
T ss_dssp GGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred cccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcccc
Confidence 899999999999866533323445567899999999999999999999999999999999999999964
Q ss_pred CCCCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCC-CCHHHHHHHHHhhhhh
Q 043053 921 TIPDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDER-PTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~R-Pt~~~v~~~l~~~~~~ 990 (1058)
..... ..........+ ..+.+ ..++..|++.+|.+| |+++++.+.++++..+
T Consensus 288 ~~~~~-------------~~~~~~~~~~~--~~~~~---~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 288 NEGGE-------------CKPEGLFRRLP--HLDMW---NEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp EETTE-------------EEECSCCTTCS--SHHHH---HHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred CCCCc-------------eeechhccccC--cHHHH---HHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 32211 00111111111 11222 236677999999998 5788888888876554
No 181
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.5e-38 Score=359.34 Aligned_cols=248 Identities=24% Similarity=0.248 Sum_probs=190.5
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHH-HcccCCCcccceeeEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKT-LGSIRHKNIVRFLGCC 780 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~~~~~~ 780 (1058)
.++|.+.++||+|+||+||+| +..+++.||||++.+.... .....+.+.+|..+ ++.++||||+++++++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~--------~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~ 108 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAIL--------KKKEEKHIMSERNVLLKNVKHPFLVGLHFSF 108 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC---------------------CCBCCCCCTTBCCEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhh--------hhHHHHHHHHHHHHHHHhCCCCCCCCEEEEE
Confidence 368999999999999999999 4457899999998654321 12234556777776 5778999999999999
Q ss_pred EcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecc
Q 043053 781 WNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADF 860 (1058)
Q Consensus 781 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~Df 860 (1058)
.+.+..|+||||++||+|.+++... ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 109 ~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DF 183 (373)
T 2r5t_A 109 QTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDF 183 (373)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred EeCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeC
Confidence 9999999999999999999999863 5688999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccc
Q 043053 861 GLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQV 940 (1058)
Q Consensus 861 Gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1058)
|+++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+....
T Consensus 184 G~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--~~~~~~~i~~~~---- 255 (373)
T 2r5t_A 184 GLCKENIEHN--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN--TAEMYDNILNKP---- 255 (373)
T ss_dssp CBCGGGBCCC--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB--HHHHHHHHHHSC----
T ss_pred ccccccccCC--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHhcc----
Confidence 9998643322 23456789999999999999999999999999999999999999997532 112221111110
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 043053 941 LDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKD 979 (1058)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~ 979 (1058)
.......+. .+.+++..||+.||++||++.+
T Consensus 256 --~~~~~~~~~------~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 256 --LQLKPNITN------SARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp --CCCCSSSCH------HHHHHHHHHTCSSGGGSTTTTT
T ss_pred --cCCCCCCCH------HHHHHHHHHcccCHHhCCCCCC
Confidence 111112222 2344778899999999999853
No 182
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=7.5e-38 Score=346.68 Aligned_cols=260 Identities=25% Similarity=0.390 Sum_probs=201.3
Q ss_pred hhccccceeccccceEEEEEEecC----CcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDN----GEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
.+|.+.+.||+|+||+||+|.... +..||||.+... ......+.+.+|+.++++++||||++++++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~----------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 94 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI----------TDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 94 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC----------CSHHHHHHHHHHHHHHHTCCCTTBCCCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC----------CCHHHHHHHHHHHHHHHhCCCCCEeeeeeE
Confidence 468888999999999999995432 235899987532 233456789999999999999999999998
Q ss_pred EE-cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeee
Q 043053 780 CW-NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIA 858 (1058)
Q Consensus 780 ~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~ 858 (1058)
+. .++..++||||+++|+|.++++.. ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 95 ~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~ 170 (298)
T 3f66_A 95 CLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVA 170 (298)
T ss_dssp ECCSSSCCEEEEECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEEC
T ss_pred EEcCCCceEEEEeCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEEC
Confidence 65 456779999999999999999763 46689999999999999999999999 99999999999999999999999
Q ss_pred ccccceeccCCCc--ccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhh
Q 043053 859 DFGLAKLVDDGDF--ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQK 935 (1058)
Q Consensus 859 DfGl~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~ 935 (1058)
|||+++....... ........||+.|+|||++.+..++.++||||+|+++|||++ |.+||..... ..........
T Consensus 171 Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~--~~~~~~~~~~ 248 (298)
T 3f66_A 171 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--FDITVYLLQG 248 (298)
T ss_dssp SCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT--TTHHHHHHTT
T ss_pred cccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH--HHHHHHHhcC
Confidence 9999987654332 122344567889999999999999999999999999999999 5555554322 2222222221
Q ss_pred cCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 936 KGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
. .... ....+. .+..++..||+.||++|||++++++.|+++...
T Consensus 249 ~--~~~~---~~~~~~------~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 249 R--RLLQ---PEYCPD------PLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp C--CCCC---CTTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred C--CCCC---CccCCH------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 1 1111 111222 234477889999999999999999999988654
No 183
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=6.3e-38 Score=345.87 Aligned_cols=262 Identities=23% Similarity=0.366 Sum_probs=206.2
Q ss_pred hhccccc-eeccccceEEEEEEe---cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 704 KCLVDAN-VIGKGCSGVVYRADM---DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 704 ~~~~~~~-~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
++|.+.+ .||+|+||+||+|.. .+++.||||++.... ......+++.+|++++++++||||++++++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 86 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---------NDPALKDELLAEANVMQQLDNPYIVRMIGI 86 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC--------------CHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc---------cCHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 5778877 999999999999943 346889999985431 233446789999999999999999999999
Q ss_pred EEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeec
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIAD 859 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~D 859 (1058)
+ ..+..++||||+++|+|.+++... ..+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 87 ~-~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~D 160 (291)
T 1xbb_A 87 C-EAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISD 160 (291)
T ss_dssp E-ESSSEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECC
T ss_pred E-CCCCcEEEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEcc
Confidence 9 566789999999999999999863 5689999999999999999999999 999999999999999999999999
Q ss_pred cccceeccCCCc-ccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcC
Q 043053 860 FGLAKLVDDGDF-ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKG 937 (1058)
Q Consensus 860 fGl~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1058)
||+++....... ........+++.|+|||++.+..++.++||||||+++|||++ |+.||.... .......+....
T Consensus 161 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~~~~~~~~~~~- 237 (291)
T 1xbb_A 161 FGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK--GSEVTAMLEKGE- 237 (291)
T ss_dssp CTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHHHHHHHHTTC-
T ss_pred CCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHHcCC-
Confidence 999987654332 122233456789999999988889999999999999999999 999997542 222333222211
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhhhh
Q 043053 938 IQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHEREE 993 (1058)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~~~ 993 (1058)
.+......+. .+..++..||+.||++||+++++++.|+++......
T Consensus 238 ----~~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 283 (291)
T 1xbb_A 238 ----RMGCPAGCPR------EMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 283 (291)
T ss_dssp ----CCCCCTTCCH------HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHH
T ss_pred ----CCCCCCCCCH------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhh
Confidence 1111122222 233477889999999999999999999998765543
No 184
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.8e-38 Score=366.30 Aligned_cols=265 Identities=20% Similarity=0.282 Sum_probs=196.1
Q ss_pred HHHHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceee
Q 043053 700 EQVLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLG 778 (1058)
Q Consensus 700 ~~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~ 778 (1058)
..+.++|.+.+.||+|+||+||+| +..+++.||||++........ ..........+.+|++++++++||||+++++
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 207 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIG---SAREADPALNVETEIEILKKLNHPCIIKIKN 207 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC-----------CCHHHHHHHHHHCCCTTBCCCCE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhccc---ccccchhHHHHHHHHHHHHhCCCCCEeeEEE
Confidence 566789999999999999999999 666789999999865432111 0112223346889999999999999999999
Q ss_pred EEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCC---Ce
Q 043053 779 CCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEF---EP 855 (1058)
Q Consensus 779 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~---~~ 855 (1058)
++.. +..++||||+++|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++ .+
T Consensus 208 ~~~~-~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~ 281 (419)
T 3i6u_A 208 FFDA-EDYYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLI 281 (419)
T ss_dssp EEES-SEEEEEEECCTTCBGGGGTSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCE
T ss_pred EEec-CceEEEEEcCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceE
Confidence 9854 457999999999999999976 36789999999999999999999999 999999999999997554 59
Q ss_pred eeeccccceeccCCCcccccccccCcCCccCcccccc---CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHH
Q 043053 856 YIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYM---MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWV 932 (1058)
Q Consensus 856 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~ 932 (1058)
||+|||+++..... ......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .....+
T Consensus 282 kl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~i 357 (419)
T 3i6u_A 282 KITDFGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQI 357 (419)
T ss_dssp EECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-CHHHHH
T ss_pred EEeecccceecCCC---ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-HHHHHH
Confidence 99999999876543 22345679999999999753 567889999999999999999999997543322 222222
Q ss_pred HhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 043053 933 RQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLK 985 (1058)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~ 985 (1058)
.... ....+......+. .+.+++.+||+.||++|||++|++++-.
T Consensus 358 ~~~~--~~~~~~~~~~~~~------~~~~li~~~L~~dP~~Rps~~e~l~hp~ 402 (419)
T 3i6u_A 358 TSGK--YNFIPEVWAEVSE------KALDLVKKLLVVDPKARFTTEEALRHPW 402 (419)
T ss_dssp HTTC--CCCCHHHHTTSCH------HHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred hcCC--CCCCchhhcccCH------HHHHHHHHHccCChhHCcCHHHHhCCcc
Confidence 2211 0111111111121 2445788899999999999999998643
No 185
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.9e-38 Score=371.74 Aligned_cols=253 Identities=19% Similarity=0.224 Sum_probs=195.5
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.++|.+.+.||+|+||.||+| +..+|+.||||++..... ........+.+|+.++++++||||+++++++.
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--------~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~ 218 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVI--------VAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 218 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH--------C-------------CCCCCSCTTSCCEEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhh--------hhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEe
Confidence 367999999999999999999 566899999999854321 12233467789999999999999999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccc-cCCCCeEeCCCCCCcEEEcCCCCeeeecc
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHH-DCVPPIVHRDIKANNILIGLEFEPYIADF 860 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivHrDikp~Nill~~~~~~kl~Df 860 (1058)
+.+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+ . +||||||||+|||++.++.+||+||
T Consensus 219 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DF 293 (446)
T 4ejn_A 219 THDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDF 293 (446)
T ss_dssp ETTEEEEEECCCSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCC
T ss_pred eCCEEEEEEeeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccC
Confidence 999999999999999999999764 578999999999999999999998 7 9999999999999999999999999
Q ss_pred ccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccc
Q 043053 861 GLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQV 940 (1058)
Q Consensus 861 Gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1058)
|+++...... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+....
T Consensus 294 G~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--~~~~~~~i~~~~---- 365 (446)
T 4ejn_A 294 GLCKEGIKDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--HEKLFELILMEE---- 365 (446)
T ss_dssp CCCCTTCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHCC----
T ss_pred CCceeccCCC--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC--HHHHHHHHHhCC----
Confidence 9997543322 23445789999999999999999999999999999999999999997542 222222222111
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHH
Q 043053 941 LDPSLLSRPESEIDEMLQALGVALLCVNASPDERP-----TMKDVAAML 984 (1058)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----t~~~v~~~l 984 (1058)
.......+. .+.+++..||+.||++|| +++|++++-
T Consensus 366 --~~~p~~~~~------~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp 406 (446)
T 4ejn_A 366 --IRFPRTLGP------EAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR 406 (446)
T ss_dssp --CCCCTTSCH------HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred --CCCCccCCH------HHHHHHHHHcccCHHHhCCCCCCCHHHHHhCc
Confidence 111111222 234577889999999999 999998753
No 186
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3e-39 Score=365.49 Aligned_cols=273 Identities=18% Similarity=0.197 Sum_probs=197.5
Q ss_pred hhccccceeccccceEEEEEEec----CCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 704 KCLVDANVIGKGCSGVVYRADMD----NGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
++|.+.+.||+|+||.||+|... ++..||||++.....................+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57999999999999999999554 67889999885331100000000001122457789999999999999999999
Q ss_pred EEc----CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCC--
Q 043053 780 CWN----RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEF-- 853 (1058)
Q Consensus 780 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~-- 853 (1058)
+.. ....|+||||+ +++|.+++... ..+++..++.++.||++||+|||+. +|+||||||+||+++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQN--GTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGG--GBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTT
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCC
Confidence 987 66789999999 99999999864 3799999999999999999999999 999999999999999887
Q ss_pred CeeeeccccceeccCCCc-----ccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhH
Q 043053 854 EPYIADFGLAKLVDDGDF-----ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHV 928 (1058)
Q Consensus 854 ~~kl~DfGl~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~ 928 (1058)
.+||+|||+++....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 999999999987643221 111245679999999999999999999999999999999999999996433222222
Q ss_pred HHHHHhhc-C-ccccCCCCC-CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhh
Q 043053 929 VDWVRQKK-G-IQVLDPSLL-SRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIK 988 (1058)
Q Consensus 929 ~~~~~~~~-~-~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~ 988 (1058)
........ . ......... ...+. .+..++..||+.||++|||++++++.|++..
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 271 QTAKTNLLDELPQSVLKWAPSGSSCC------EIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHHHHHHTTTHHHHHHSCTTSCCH------HHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred HHHHHhhcccccHHHHhhccccccHH------HHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 11111110 0 000000000 01122 2344777899999999999999999987754
No 187
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=7e-38 Score=344.11 Aligned_cols=259 Identities=22% Similarity=0.318 Sum_probs=202.9
Q ss_pred HHhhccccceeccccceEEEEEEe-cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEE
Q 043053 702 VLKCLVDANVIGKGCSGVVYRADM-DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCC 780 (1058)
Q Consensus 702 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 780 (1058)
+.++|.+.+.||+|+||.||+|.. .+++.||||++....... .......+.+.+|++++++++||||+++++++
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 77 (283)
T 3bhy_A 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSS-----SRRGVSREEIEREVNILREIRHPNIITLHDIF 77 (283)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTT-----CSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccc-----cccchHHHHHHHHHHHHHhCCCCCeeehhhee
Confidence 347899999999999999999954 579999999985442211 12223467899999999999999999999999
Q ss_pred EcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCC----Cee
Q 043053 781 WNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEF----EPY 856 (1058)
Q Consensus 781 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~----~~k 856 (1058)
.++...++||||+++++|.+++... ..+++..++.++.|+++||+|||+. +|+||||||+||+++.++ .+|
T Consensus 78 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~k 152 (283)
T 3bhy_A 78 ENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIK 152 (283)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEE
T ss_pred cCCCeEEEEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceE
Confidence 9999999999999999999999763 5689999999999999999999999 999999999999998877 899
Q ss_pred eeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhc
Q 043053 857 IADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKK 936 (1058)
Q Consensus 857 l~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 936 (1058)
|+|||.+....... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||.... .......+...
T Consensus 153 l~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~- 226 (283)
T 3bhy_A 153 LIDFGIAHKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET--KQETLTNISAV- 226 (283)
T ss_dssp ECCCTTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHHTT-
T ss_pred EEecccceeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc--hHHHHHHhHhc-
Confidence 99999998765432 2234568999999999998899999999999999999999999997542 11111111111
Q ss_pred CccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 937 GIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
.....+......+. .+.+++.+||+.||++|||+++++++
T Consensus 227 -~~~~~~~~~~~~~~------~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 227 -NYDFDEEYFSNTSE------LAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp -CCCCCHHHHTTCCH------HHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred -ccCCcchhcccCCH------HHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 11111111111111 23457888999999999999999984
No 188
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=356.68 Aligned_cols=263 Identities=19% Similarity=0.297 Sum_probs=192.9
Q ss_pred hhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|.+.+.||+|+||+||+|. ..+++.||||++.... .......+.+|++++++++||||+++++++.+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 71 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEH----------EEGAPCTAIREVSLLKDLKHANIVTLHDIIHT 71 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC----------------CCCCCCCHHHHSCCCCTTBCCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccc----------ccccchhHHHHHHHHHhcCCCCCCeeeeEEee
Confidence 578999999999999999994 4589999999985332 11112244579999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
++..++||||++ |+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 72 ~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 146 (324)
T 3mtl_A 72 EKSLTLVFEYLD-KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGL 146 (324)
T ss_dssp SSCEEEEEECCS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSE
T ss_pred CCEEEEEecccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcc
Confidence 999999999997 4999998764 45789999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcc--
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQ-- 939 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~-- 939 (1058)
++...... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ......+.......
T Consensus 147 a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~~~ 222 (324)
T 3mtl_A 147 ARAKSIPT--KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV--EEQLHFIFRILGTPTE 222 (324)
T ss_dssp EECC--------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCT
T ss_pred cccccCCc--cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCCh
Confidence 98654322 23345578999999999876 5689999999999999999999999975421 12222221111100
Q ss_pred ccCCCCC-----------CCCchhH-----HHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 043053 940 VLDPSLL-----------SRPESEI-----DEMLQALGVALLCVNASPDERPTMKDVAAMLK 985 (1058)
Q Consensus 940 ~~~~~~~-----------~~~~~~~-----~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~ 985 (1058)
..-+... ....... .....+.+++.+||+.||++|||++|++++-.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 284 (324)
T 3mtl_A 223 ETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF 284 (324)
T ss_dssp TTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred HhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChh
Confidence 0000000 0000000 00012345888999999999999999998543
No 189
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-37 Score=345.06 Aligned_cols=261 Identities=25% Similarity=0.356 Sum_probs=204.9
Q ss_pred hccccceeccccceEEEEEEe-cCCc---EEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEE
Q 043053 705 CLVDANVIGKGCSGVVYRADM-DNGE---VIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCC 780 (1058)
Q Consensus 705 ~~~~~~~lG~G~~g~Vy~~~~-~~~~---~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 780 (1058)
.|...++||+|+||+||+|.. .+++ .||+|++... ......+.+.+|+.++++++||||+++++++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~----------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 91 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI----------TEMQQVEAFLREGLLMRGLNHPNVLALIGIM 91 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC----------CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc----------ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence 456678999999999999953 3333 7999988532 2334567899999999999999999999999
Q ss_pred EcCCCc-eEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeec
Q 043053 781 WNRNNR-LLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIAD 859 (1058)
Q Consensus 781 ~~~~~~-~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~D 859 (1058)
.+.+.. ++||||+.+|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 92 ~~~~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~D 167 (298)
T 3pls_A 92 LPPEGLPHVLLPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVAD 167 (298)
T ss_dssp CCSSSCCEEEECCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECC
T ss_pred ecCCCCcEEEEecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCc
Confidence 876665 9999999999999999764 46789999999999999999999999 999999999999999999999999
Q ss_pred cccceeccCCCc--ccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcC
Q 043053 860 FGLAKLVDDGDF--ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKG 937 (1058)
Q Consensus 860 fGl~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 937 (1058)
||+++....... ........+|+.|+|||...+..++.++||||+|+++|+|++|..|+.... ........+.....
T Consensus 168 fg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~-~~~~~~~~~~~~~~ 246 (298)
T 3pls_A 168 FGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI-DPFDLTHFLAQGRR 246 (298)
T ss_dssp TTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CGGGHHHHHHTTCC
T ss_pred CCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC-CHHHHHHHhhcCCC
Confidence 999986544321 122344568899999999999999999999999999999999666654332 22333333332221
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043053 938 IQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHER 991 (1058)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~ 991 (1058)
.......+. .+..++..||+.||.+|||++++++.|+++..+.
T Consensus 247 -----~~~~~~~~~------~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 247 -----LPQPEYCPD------SLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp -----CCCCTTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -----CCCCccchH------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence 111111222 2344788899999999999999999999886543
No 190
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.4e-38 Score=344.99 Aligned_cols=250 Identities=22% Similarity=0.324 Sum_probs=180.2
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|.+.+.||+|+||.||+| +..+|+.||||++..... ......+.+.+|++++++++||||+++++++.+
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 84 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVL--------AKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS 84 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-------------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhc--------chHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec
Confidence 57999999999999999999 456799999999854321 223346789999999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
.+..++||||+ +++|.+++... ..+++..++.++.|+++|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 85 ~~~~~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 158 (275)
T 2eue_A 85 KDEIIMVIEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGL 158 (275)
T ss_dssp SSCEEEEEECC-CEEHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSC
T ss_pred CCeEEEEehhc-CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeeccc
Confidence 99999999999 67898888763 5689999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcccc
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKI-TEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVL 941 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1058)
+....... ......||+.|+|||++.+..+ +.++||||+|+++|||++|+.||.... .......+....
T Consensus 159 ~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~----- 228 (275)
T 2eue_A 159 SNIMTDGN---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--IPVLFKNISNGV----- 228 (275)
T ss_dssp C------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHTC-----
T ss_pred ceeccCcc---cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhCC-----
Confidence 98665432 2234569999999999887765 689999999999999999999997532 111111111111
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 942 DPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
.......+. .+.+++.+||+.||++|||++|++++-
T Consensus 229 -~~~~~~~~~------~~~~li~~~l~~dP~~Rps~~e~l~h~ 264 (275)
T 2eue_A 229 -YTLPKFLSP------GAAGLIKRMLIVNPLNRISIHEIMQDD 264 (275)
T ss_dssp -CCCCTTSCH------HHHHHHHHHSCSSGGGSCCHHHHTTCH
T ss_pred -CCCCccCCH------HHHHHHHHHhhcCHhHCCCHHHHhhCC
Confidence 111112222 234478889999999999999998753
No 191
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=6.4e-38 Score=352.01 Aligned_cols=262 Identities=26% Similarity=0.408 Sum_probs=203.9
Q ss_pred hhccccceeccccceEEEEE-EecCCcEE--EEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccceeeE
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVI--AVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVRFLGC 779 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~v--avK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~ 779 (1058)
++|.+.+.||+|+||.||+| ...++..+ |||.+... ......+.+.+|+++++++ +||||++++++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~----------~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 94 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY----------ASKDDHRDFAGELEVLCKLGHHPNIINLLGA 94 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC----------------CHHHHHHHHHTTCCCCTTBCCEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc----------cchHHHHHHHHHHHHHHhccCCCchhhhcee
Confidence 68899999999999999999 44566654 89987432 1223456789999999999 89999999999
Q ss_pred EEcCCCceEEEEecCCCChhhhhhhcC--------------CCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCC
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSLLHERT--------------GNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKAN 845 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~ 845 (1058)
+.+++..++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+
T Consensus 95 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~ 171 (327)
T 1fvr_A 95 CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAAR 171 (327)
T ss_dssp EEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGG
T ss_pred eeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccc
Confidence 999999999999999999999997642 34789999999999999999999999 9999999999
Q ss_pred cEEEcCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCC
Q 043053 846 NILIGLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPD 924 (1058)
Q Consensus 846 Nill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~ 924 (1058)
||+++.++.+||+|||+++..... .......+++.|+|||++.+..++.++||||+|+++|||++ |+.||.....
T Consensus 172 NIl~~~~~~~kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~- 247 (327)
T 1fvr_A 172 NILVGENYVAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC- 247 (327)
T ss_dssp GEEECGGGCEEECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-
T ss_pred eEEEcCCCeEEEcccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH-
Confidence 999999999999999998743221 22234457889999999988889999999999999999998 9999975421
Q ss_pred ChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhhhhh
Q 043053 925 GSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHEREEY 994 (1058)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~~~~ 994 (1058)
......+... .........+. .+.+++.+||+.||++|||++++++.|+++..+....
T Consensus 248 -~~~~~~~~~~-----~~~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~ 305 (327)
T 1fvr_A 248 -AELYEKLPQG-----YRLEKPLNCDD------EVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTY 305 (327)
T ss_dssp -HHHHHHGGGT-----CCCCCCTTBCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCS
T ss_pred -HHHHHHhhcC-----CCCCCCCCCCH------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcCc
Confidence 1221111111 11111111222 2344788899999999999999999999887665433
No 192
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.3e-38 Score=355.72 Aligned_cols=266 Identities=26% Similarity=0.330 Sum_probs=205.6
Q ss_pred hhccccceeccccceEEEEEE-----ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceee
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-----MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLG 778 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~ 778 (1058)
++|.+.+.||+|+||.||+|. ..+++.||||++... .....+.+.+|++++++++||||+++++
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-----------~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 91 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-----------GPDQQRDFQREIQILKALHSDFIVKYRG 91 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC-----------CHHHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC-----------CHHHHHHHHHHHHHHHhcCCCceeEEEE
Confidence 689999999999999999997 357899999998532 2334577999999999999999999999
Q ss_pred EEEc--CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCee
Q 043053 779 CCWN--RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPY 856 (1058)
Q Consensus 779 ~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~k 856 (1058)
++.. ....++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 92 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~k 167 (327)
T 3lxl_A 92 VSYGPGRQSLRLVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVK 167 (327)
T ss_dssp EEECSSSCEEEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEE
T ss_pred EEecCCCceEEEEEeecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEE
Confidence 9874 45578999999999999999864 24689999999999999999999999 999999999999999999999
Q ss_pred eeccccceeccCCCc-ccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCC----------CC
Q 043053 857 IADFGLAKLVDDGDF-ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIP----------DG 925 (1058)
Q Consensus 857 l~DfGl~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~----------~~ 925 (1058)
|+|||+++....... ........||+.|+|||++.+..++.++||||+|+++|+|++|+.||..... ..
T Consensus 168 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~ 247 (327)
T 3lxl_A 168 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDV 247 (327)
T ss_dssp ECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----C
T ss_pred EcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhccccccc
Confidence 999999987654332 1223445688899999999988899999999999999999999999864211 00
Q ss_pred hhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043053 926 SHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHERE 992 (1058)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~~ 992 (1058)
............. .........+. + +..++..||+.||++|||+++++++|+.+.....
T Consensus 248 ~~~~~~~~~~~~~--~~~~~~~~~~~---~---l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 248 PALSRLLELLEEG--QRLPAPPACPA---E---VHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp CHHHHHHHHHHTT--CCCCCCTTCCH---H---HHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred ccHHHHHHHhhcc--cCCCCCCcccH---H---HHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 0111111111100 01111112222 2 3347788999999999999999999998866543
No 193
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=356.40 Aligned_cols=270 Identities=24% Similarity=0.343 Sum_probs=196.5
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHH--HcccCCCcccceeeEEE
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKT--LGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~ 781 (1058)
++|.+.+.||+|+||.||+|.. +++.||||++... ....+..|.++ +..++||||+++++++.
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--------------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~ 77 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA--------------NRQNFINEKNIYRVPLMEHDNIARFIVGDE 77 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG--------------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc--------------chhhHHHHHHHHHHHhccCcchhhheeccc
Confidence 6889999999999999999966 5899999998422 12344444444 55589999999998654
Q ss_pred c-----CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccC------CCCeEeCCCCCCcEEEc
Q 043053 782 N-----RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDC------VPPIVHRDIKANNILIG 850 (1058)
Q Consensus 782 ~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------~~~ivHrDikp~Nill~ 850 (1058)
. ...+++||||+++|+|.++++.. ..++..++.++.|+++||+|||+.. .++|+||||||+|||++
T Consensus 78 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~ 154 (336)
T 3g2f_A 78 RVTADGRMEYLLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVK 154 (336)
T ss_dssp EECTTSCEEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEEC
T ss_pred ccccCCCceEEEEEecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEc
Confidence 2 22458999999999999999763 4589999999999999999999862 23899999999999999
Q ss_pred CCCCeeeeccccceeccCCCc------ccccccccCcCCccCcccccc-------CCCCcccchhhHHHHHHHHHhCCCC
Q 043053 851 LEFEPYIADFGLAKLVDDGDF------ARSSNTVAGSYGYIAPEYGYM-------MKITEKSDVYSYGVVVLEVLTGKQP 917 (1058)
Q Consensus 851 ~~~~~kl~DfGl~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGvvl~elltg~~P 917 (1058)
.++.+||+|||+++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 155 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p 234 (336)
T 3g2f_A 155 NDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTD 234 (336)
T ss_dssp TTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGG
T ss_pred CCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCc
Confidence 999999999999987654321 122334579999999999876 4566789999999999999999887
Q ss_pred CCCCCCCCh-------------hHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 918 IDPTIPDGS-------------HVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 918 ~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
|........ .... ...........+...............+.+++.+||+.||++|||++|+++.|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L 313 (336)
T 3g2f_A 235 LFPGESVPEYQMAFQTEVGNHPTFED-MQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERM 313 (336)
T ss_dssp GSTTSCCCCCCCTTHHHHCSSCCHHH-HHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred CCCccchhHHHHhhhcccCCCchHHH-HHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHH
Confidence 754321110 0000 01111111112222222222112222345688999999999999999999999
Q ss_pred Hhhhhhhh
Q 043053 985 KEIKHERE 992 (1058)
Q Consensus 985 ~~~~~~~~ 992 (1058)
+++.....
T Consensus 314 ~~ll~~~~ 321 (336)
T 3g2f_A 314 AELMMIWE 321 (336)
T ss_dssp HHHHHCCC
T ss_pred HHHHHHHH
Confidence 98875443
No 194
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.5e-37 Score=345.20 Aligned_cols=254 Identities=26% Similarity=0.386 Sum_probs=207.7
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
+.|...+.||+|+||.||+| +..+++.||||++... ......+.+.+|+.++++++||||+++++++.+
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 91 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLE----------EAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK 91 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETT----------TCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccc----------ccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec
Confidence 57899999999999999999 5567999999998533 123346789999999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
+...++||||+++++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 92 ~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~ 165 (303)
T 3a7i_A 92 DTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGV 165 (303)
T ss_dssp TTEEEEEEECCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCeEEEEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeeccc
Confidence 9999999999999999999974 5689999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccccC
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVLD 942 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1058)
+....... .......||+.|+|||++.+..++.++||||||+++|+|++|+.||.... .......+.... .
T Consensus 166 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~-----~ 236 (303)
T 3a7i_A 166 AGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH--PMKVLFLIPKNN-----P 236 (303)
T ss_dssp CEECBTTB--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSC-----C
T ss_pred ceecCccc--cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC--HHHHHHHhhcCC-----C
Confidence 98765533 22345679999999999999999999999999999999999999997542 122222222111 1
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhh
Q 043053 943 PSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIK 988 (1058)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~ 988 (1058)
+......+.. +..++..||+.||++|||+.+++++.....
T Consensus 237 ~~~~~~~~~~------l~~li~~~l~~dp~~Rps~~~ll~~~~~~~ 276 (303)
T 3a7i_A 237 PTLEGNYSKP------LKEFVEACLNKEPSFRPTAKELLKHKFILR 276 (303)
T ss_dssp CCCCSSCCHH------HHHHHHHHCCSSGGGSCCHHHHTTCHHHHH
T ss_pred CCCccccCHH------HHHHHHHHcCCChhhCcCHHHHhhChhhhc
Confidence 1222222222 334778899999999999999998765443
No 195
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-38 Score=357.89 Aligned_cols=260 Identities=23% Similarity=0.270 Sum_probs=202.8
Q ss_pred hhccccceeccccceEEEEEEe----cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccceee
Q 043053 704 KCLVDANVIGKGCSGVVYRADM----DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVRFLG 778 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~ 778 (1058)
++|.+.+.||+|+||.||+|.. .+++.||||++...... ......+.+.+|+++++++ +||||+++++
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 126 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIV-------QKAKTTEHTRTERQVLEHIRQSPFLVTLHY 126 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEE-------EEESSGGGCCCHHHHHHHHHTCTTBCCEEE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhh-------hhhhHHHHHHHHHHHHHHccCCCceeEEEE
Confidence 6899999999999999999965 47899999998654321 1223345677899999999 5999999999
Q ss_pred EEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeee
Q 043053 779 CCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIA 858 (1058)
Q Consensus 779 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~ 858 (1058)
++..+...++||||+++|+|.+++... ..+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+
T Consensus 127 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~ 201 (355)
T 1vzo_A 127 AFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLT 201 (355)
T ss_dssp EEEETTEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEES
T ss_pred EEeeCceEEEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEe
Confidence 999999999999999999999999864 5689999999999999999999999 99999999999999999999999
Q ss_pred ccccceeccCCCcccccccccCcCCccCcccccc--CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhc
Q 043053 859 DFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYM--MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKK 936 (1058)
Q Consensus 859 DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 936 (1058)
|||+++....... ......+||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .........
T Consensus 202 DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~ 279 (355)
T 1vzo_A 202 DFGLSKEFVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEISRRIL 279 (355)
T ss_dssp CSSEEEECCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHHHHHHH
T ss_pred eCCCCeecccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-HHHHHHHHh
Confidence 9999987643221 23345679999999999875 3478899999999999999999999975432221 112111111
Q ss_pred CccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHHHh
Q 043053 937 GIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERP-----TMKDVAAMLKE 986 (1058)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RP-----t~~~v~~~l~~ 986 (1058)
. ..+......+. .+.+++.+||+.||++|| ++++++++...
T Consensus 280 ~---~~~~~~~~~~~------~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f 325 (355)
T 1vzo_A 280 K---SEPPYPQEMSA------LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325 (355)
T ss_dssp H---CCCCCCTTSCH------HHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred c---cCCCCCcccCH------HHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcch
Confidence 1 11112222222 233477889999999999 89999876543
No 196
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=5.5e-38 Score=345.08 Aligned_cols=250 Identities=27% Similarity=0.392 Sum_probs=203.5
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|.+.+.||+|+||.||+| +..+++.||||++..... ......+.+.+|++++++++||||+++++++.+
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 85 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL--------EKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD 85 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHH--------HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEccccc--------chHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc
Confidence 67999999999999999999 445788999999854321 122345789999999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
++..++||||+++|+|.+++... ..+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 86 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~ 160 (284)
T 2vgo_A 86 RKRIYLMLEFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGW 160 (284)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred CCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccc
Confidence 99999999999999999999864 4689999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccccC
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVLD 942 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1058)
+...... ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||.... .......+.. .+
T Consensus 161 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~~~~------~~ 228 (284)
T 2vgo_A 161 SVHAPSL----RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS--HTETHRRIVN------VD 228 (284)
T ss_dssp CEECSSS----CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHHT------TC
T ss_pred cccCccc----ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC--HhHHHHHHhc------cc
Confidence 8765432 2234579999999999999899999999999999999999999997532 1111111111 11
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 943 PSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
.......+. .+.+++..||+.||++|||+++++++-
T Consensus 229 ~~~~~~~~~------~~~~li~~~l~~~p~~Rps~~~ll~h~ 264 (284)
T 2vgo_A 229 LKFPPFLSD------GSKDLISKLLRYHPPQRLPLKGVMEHP 264 (284)
T ss_dssp CCCCTTSCH------HHHHHHHHHSCSSGGGSCCHHHHHTCH
T ss_pred cCCCCcCCH------HHHHHHHHHhhcCHhhCCCHHHHhhCH
Confidence 111122222 233477889999999999999998753
No 197
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=3.2e-38 Score=377.06 Aligned_cols=256 Identities=27% Similarity=0.453 Sum_probs=207.9
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
++|.+.+.||+|+||.||+|.+..+..||||++... ....++|.+|++++++++||||+++++++.+
T Consensus 267 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~------------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~- 333 (535)
T 2h8h_A 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG------------TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 333 (535)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTT------------SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred hhhhhheecccCCCeEEEEEEECCCceEEEEEeCCC------------CCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-
Confidence 578899999999999999998887888999998532 1235789999999999999999999999876
Q ss_pred CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccccc
Q 043053 784 NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLA 863 (1058)
Q Consensus 784 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~ 863 (1058)
+..|+||||+++|+|.++++......+++..++.|+.||++||+|||++ +||||||||+|||++.++.+||+|||++
T Consensus 334 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 410 (535)
T 2h8h_A 334 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLA 410 (535)
T ss_dssp SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTST
T ss_pred ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccc
Confidence 6789999999999999999865456789999999999999999999999 9999999999999999999999999999
Q ss_pred eeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcCccccC
Q 043053 864 KLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKGIQVLD 942 (1058)
Q Consensus 864 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1058)
+....... .......++..|+|||++.+..++.++|||||||++|||++ |+.||.... .......+.....
T Consensus 411 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~--~~~~~~~i~~~~~----- 482 (535)
T 2h8h_A 411 RLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--NREVLDQVERGYR----- 482 (535)
T ss_dssp TTCCCHHH-HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC--HHHHHHHHHTTCC-----
T ss_pred eecCCCce-ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCCC-----
Confidence 86543221 22234457789999999998899999999999999999999 999997542 2223332222111
Q ss_pred CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhh
Q 043053 943 PSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKH 989 (1058)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~ 989 (1058)
.......+. + +.+++..||+.||++|||++++++.|+++..
T Consensus 483 ~~~~~~~~~---~---l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 483 MPCPPECPE---S---LHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp CCCCTTCCH---H---HHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred CCCCCCCCH---H---HHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 111112222 2 3347888999999999999999999988754
No 198
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=347.37 Aligned_cols=255 Identities=26% Similarity=0.404 Sum_probs=198.9
Q ss_pred HHHhhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 701 QVLKCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 701 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
...++|.+.+.||+|+||.||+|. ..+|+.||||++... ...+.+.+|+.++++++||||++++++
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-------------~~~~~~~~e~~~l~~l~h~~i~~~~~~ 92 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE-------------SDLQEIIKEISIMQQCDSPHVVKYYGS 92 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT-------------SCCHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch-------------HHHHHHHHHHHHHHhCCCCCCccEEEE
Confidence 345789999999999999999994 456999999988422 124678999999999999999999999
Q ss_pred EEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeec
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIAD 859 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~D 859 (1058)
+...+..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 93 ~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~d 168 (314)
T 3com_A 93 YFKNTDLWIVMEYCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLAD 168 (314)
T ss_dssp EEETTEEEEEEECCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECC
T ss_pred EEeCCEEEEEeecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEee
Confidence 99999999999999999999999743 46789999999999999999999999 999999999999999999999999
Q ss_pred cccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcc
Q 043053 860 FGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQ 939 (1058)
Q Consensus 860 fGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1058)
||.+....... .......||+.|+|||++.+..++.++||||||+++|+|++|+.||..... ............
T Consensus 169 fg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~-- 242 (314)
T 3com_A 169 FGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP--MRAIFMIPTNPP-- 242 (314)
T ss_dssp CTTCEECBTTB--SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSCC--
T ss_pred cccchhhhhhc--cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHhcCCC--
Confidence 99998765432 223455789999999999998999999999999999999999999975421 111111111111
Q ss_pred ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 043053 940 VLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLK 985 (1058)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~ 985 (1058)
+.. ..+..... .+.+++..||+.||.+|||+.+++++-.
T Consensus 243 ---~~~-~~~~~~~~---~l~~li~~~l~~dp~~Rpt~~~ll~~~~ 281 (314)
T 3com_A 243 ---PTF-RKPELWSD---NFTDFVKQCLVKSPEQRATATQLLQHPF 281 (314)
T ss_dssp ---CCC-SSGGGSCH---HHHHHHHHHTCSCTTTSCCHHHHTTSHH
T ss_pred ---ccc-CCcccCCH---HHHHHHHHHccCChhhCcCHHHHHhCHH
Confidence 000 01111111 2344788899999999999999987543
No 199
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.5e-38 Score=355.90 Aligned_cols=272 Identities=24% Similarity=0.288 Sum_probs=196.6
Q ss_pred HHHHHhhccccceeccccceEEEEEEe-cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCccccee
Q 043053 699 VEQVLKCLVDANVIGKGCSGVVYRADM-DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFL 777 (1058)
Q Consensus 699 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 777 (1058)
+....++|...+.||+|+||.||+|.. .+|+.||||++...... .......+.+.+|++++++++||||++++
T Consensus 5 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 78 (346)
T 1ua2_A 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRS------EAKDGINRTALREIKLLQELSHPNIIGLL 78 (346)
T ss_dssp --------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------------CTHHHHHHHHHHHCCCTTBCCEE
T ss_pred hHHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcc------hhhhhhhHHHHHHHHHHhhCCCCCCCeEE
Confidence 445568899999999999999999954 57999999998543211 11222345788999999999999999999
Q ss_pred eEEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeee
Q 043053 778 GCCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYI 857 (1058)
Q Consensus 778 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl 857 (1058)
+++.+.+..++||||+++ +|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||
T Consensus 79 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl 153 (346)
T 1ua2_A 79 DAFGHKSNISLVFDFMET-DLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKL 153 (346)
T ss_dssp EEECCTTCCEEEEECCSE-EHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred EEEeeCCceEEEEEcCCC-CHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEE
Confidence 999999999999999986 899988764 45688999999999999999999999 9999999999999999999999
Q ss_pred eccccceeccCCCcccccccccCcCCccCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhc
Q 043053 858 ADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKK 936 (1058)
Q Consensus 858 ~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 936 (1058)
+|||+++...... .......||+.|+|||++.+. .++.++||||+||++|||++|..||..... ...+........
T Consensus 154 ~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~-~~~~~~i~~~~~ 230 (346)
T 1ua2_A 154 ADFGLAKSFGSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-LDQLTRIFETLG 230 (346)
T ss_dssp CCCGGGSTTTSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHC
T ss_pred EecccceeccCCc--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHcC
Confidence 9999998764432 233456799999999998654 578999999999999999999999975421 111222221111
Q ss_pred Cc-cccCCCC---------CCCCchhHHH-----HHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 937 GI-QVLDPSL---------LSRPESEIDE-----MLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 937 ~~-~~~~~~~---------~~~~~~~~~~-----~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
.. ...-+.. ...+...... ...+.+++..||+.||++|||++|++++-
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 231 TPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp CCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred CCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 00 0000000 0000000000 12345588889999999999999998854
No 200
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.4e-38 Score=355.44 Aligned_cols=265 Identities=19% Similarity=0.250 Sum_probs=192.5
Q ss_pred HHHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 701 QVLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 701 ~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
...++|.+.+.||+|+||+||+| +..+++.||||++.... ......+.+.+|++++++++||||++++++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 101 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEH---------EEEGVPGTAIREVSLLKELQHRNIIELKSV 101 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC-----------------CHHHHHHGGGCCCTTBCCEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccc---------cccccchhHHHHHHHHHHcCCCCcceEEEE
Confidence 34578999999999999999999 56689999999985431 223345677899999999999999999999
Q ss_pred EEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEc-----CCCC
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIG-----LEFE 854 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~-----~~~~ 854 (1058)
+.+++..++||||+++ +|.+++... ..+++..++.|+.|+++||+|||+. +|+||||||+|||++ .++.
T Consensus 102 ~~~~~~~~lv~e~~~~-~L~~~~~~~--~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~ 175 (329)
T 3gbz_A 102 IHHNHRLHLIFEYAEN-DLKKYMDKN--PDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPV 175 (329)
T ss_dssp EEETTEEEEEEECCSE-EHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCE
T ss_pred EecCCEEEEEEecCCC-CHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccce
Confidence 9999999999999975 999999864 5689999999999999999999999 999999999999994 4556
Q ss_pred eeeeccccceeccCCCcccccccccCcCCccCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHH
Q 043053 855 PYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVR 933 (1058)
Q Consensus 855 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~ 933 (1058)
+||+|||+++...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||..... .........
T Consensus 176 ~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~~~~~ 252 (329)
T 3gbz_A 176 LKIGDFGLARAFGIPI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE-IDQLFKIFE 252 (329)
T ss_dssp EEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHH
T ss_pred EEECcCCCccccCCcc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH-HHHHHHHHH
Confidence 9999999998765332 233455789999999998774 489999999999999999999999975421 111111111
Q ss_pred hhcCcc-----------ccCCCCCCCCchhHHH------HHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 934 QKKGIQ-----------VLDPSLLSRPESEIDE------MLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 934 ~~~~~~-----------~~~~~~~~~~~~~~~~------~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
...... ................ ...+.+++.+||+.||++|||++|++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 253 VLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp HHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 110000 0000000000000110 0234568899999999999999999874
No 201
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.4e-37 Score=369.15 Aligned_cols=257 Identities=23% Similarity=0.304 Sum_probs=201.7
Q ss_pred HHHHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceee
Q 043053 700 EQVLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLG 778 (1058)
Q Consensus 700 ~~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~ 778 (1058)
..+.++|.+.+.||+|+||+||+| +..+++.||||++..... .......+.+|+.++++++||||+++++
T Consensus 33 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---------~~~~~~~~~~E~~~l~~l~hpniv~~~~ 103 (494)
T 3lij_A 33 GHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSV---------STSSNSKLLEEVAVLKLLDHPNIMKLYD 103 (494)
T ss_dssp CCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC--------------CTTHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred CchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEecccc---------CchHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 456789999999999999999999 455789999999854321 1223578899999999999999999999
Q ss_pred EEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCC---CCe
Q 043053 779 CCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLE---FEP 855 (1058)
Q Consensus 779 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~---~~~ 855 (1058)
++.+....|+||||+++|+|.+++... ..+++..++.++.||++||+|||+. +|+||||||+|||++.+ +.+
T Consensus 104 ~~~~~~~~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~ 178 (494)
T 3lij_A 104 FFEDKRNYYLVMECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALI 178 (494)
T ss_dssp EEECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCE
T ss_pred EEEeCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcE
Confidence 999999999999999999999998764 5689999999999999999999999 99999999999999764 459
Q ss_pred eeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhh
Q 043053 856 YIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQK 935 (1058)
Q Consensus 856 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 935 (1058)
||+|||+++...... .....+||+.|+|||++. ..++.++||||+||++|+|++|+.||.... .......+...
T Consensus 179 kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~~i~~~ 252 (494)
T 3lij_A 179 KIVDFGLSAVFENQK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT--DQEILRKVEKG 252 (494)
T ss_dssp EECCCTTCEECBTTB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHT
T ss_pred EEEECCCCeECCCCc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhC
Confidence 999999998776532 334567999999999876 468999999999999999999999997542 22222222221
Q ss_pred cCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 936 KGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
. ...........+. .+.+++..||+.||.+|||+.+++++-
T Consensus 253 ~--~~~~~~~~~~~s~------~~~~li~~~L~~dp~~R~s~~e~l~hp 293 (494)
T 3lij_A 253 K--YTFDSPEWKNVSE------GAKDLIKQMLQFDSQRRISAQQALEHP 293 (494)
T ss_dssp C--CCCCSGGGTTSCH------HHHHHHHHHTCSSTTTSCCHHHHHTCH
T ss_pred C--CCCCchhcccCCH------HHHHHHHHHCCCChhhCccHHHHhcCc
Confidence 1 1111111122222 234577889999999999999999753
No 202
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=7.8e-38 Score=345.73 Aligned_cols=253 Identities=25% Similarity=0.357 Sum_probs=204.9
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.++|...+.||+|+||.||+| +..+++.||+|++..... ......+.+.+|+.++++++||||+++++++.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~--------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 85 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL--------LKPHQREKMSMEISIHRSLAHQHVVGFHGFFE 85 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--------CSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhc--------cCHHHHHHHHHHHHHHHhCCCCCEeeeeeeec
Confidence 368999999999999999999 455789999998854321 23345678999999999999999999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccc
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFG 861 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfG 861 (1058)
+++..++||||+++++|.+++... ..+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 160 (294)
T 2rku_A 86 DNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFG 160 (294)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred cCCEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEecc
Confidence 999999999999999999998763 5789999999999999999999999 99999999999999999999999999
Q ss_pred cceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcccc
Q 043053 862 LAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVL 941 (1058)
Q Consensus 862 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1058)
.++...... .......||+.|+|||++.+..++.++||||+|+++|+|++|+.||..... ......+.. . .
T Consensus 161 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~--~-~-- 231 (294)
T 2rku_A 161 LATKVEYDG--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL--KETYLRIKK--N-E-- 231 (294)
T ss_dssp TCEECCSTT--CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHT--T-C--
T ss_pred CceecccCc--cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhh--c-c--
Confidence 998765332 223346799999999999988899999999999999999999999975421 111111111 1 1
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 942 DPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
.......+. .+..++.+||+.||++|||+++++++-
T Consensus 232 -~~~~~~~~~------~~~~li~~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 232 -YSIPKHINP------VAASLIQKMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp -CCCCTTSCH------HHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred -CCCccccCH------HHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 111112222 233477889999999999999998753
No 203
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=375.95 Aligned_cols=257 Identities=23% Similarity=0.344 Sum_probs=200.7
Q ss_pred ccccc-eeccccceEEEEEEec---CCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 706 LVDAN-VIGKGCSGVVYRADMD---NGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 706 ~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
+...+ .||+|+||.||+|... ++..||||++... ......++|.+|++++++++|||||++++++.
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~----------~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~ 406 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG----------TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ 406 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCC----------CSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCC----------CChHHHHHHHHHHHHHHhCCCCCEeeEEEEec
Confidence 33344 7999999999999543 4677999998533 22334688999999999999999999999997
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccc
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFG 861 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfG 861 (1058)
. +..++||||+++|+|.+++... ...+++..+..++.||++||+|||+. +||||||||+|||++.++.+||+|||
T Consensus 407 ~-~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFG 481 (613)
T 2ozo_A 407 A-EALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFG 481 (613)
T ss_dssp S-SSEEEEEECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCS
T ss_pred c-CCeEEEEEeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeecc
Confidence 6 5689999999999999999764 46799999999999999999999999 99999999999999999999999999
Q ss_pred cceeccCCCc-ccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcCcc
Q 043053 862 LAKLVDDGDF-ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKGIQ 939 (1058)
Q Consensus 862 l~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1058)
+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.... .......+.....
T Consensus 482 la~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~--~~~~~~~i~~~~~-- 557 (613)
T 2ozo_A 482 LSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIEQGKR-- 557 (613)
T ss_dssp TTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--SHHHHHHHHTTCC--
T ss_pred CcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC--HHHHHHHHHcCCC--
Confidence 9987643321 112223446789999999998999999999999999999998 999997653 3344443333221
Q ss_pred ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 940 VLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
.......+. + +..++..||+.||++||++.++++.|+.+...
T Consensus 558 ---~~~p~~~~~---~---l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 558 ---MECPPECPP---E---LYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp ---CCCCTTCCH---H---HHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCCcCCH---H---HHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 111112222 2 33478889999999999999999999887654
No 204
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.6e-37 Score=344.96 Aligned_cols=255 Identities=24% Similarity=0.332 Sum_probs=203.2
Q ss_pred HHHhhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 701 QVLKCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 701 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
.+.++|.+.+.||+|+||.||+|. ..+|+.||||++... .....+.+.+|++++++++||||++++++
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 74 (304)
T 2jam_A 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKS-----------PAFRDSSLENEIAVLKKIKHENIVTLEDI 74 (304)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-----------------HHHHHHHHHHHCCCTTBCCEEEE
T ss_pred chhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecc-----------cccchHHHHHHHHHHHhCCCCCeeehhhh
Confidence 456899999999999999999994 457999999998532 11224578899999999999999999999
Q ss_pred EEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEE---cCCCCee
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILI---GLEFEPY 856 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill---~~~~~~k 856 (1058)
+.+.+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+|
T Consensus 75 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~k 149 (304)
T 2jam_A 75 YESTTHYYLVMQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIM 149 (304)
T ss_dssp EECSSEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEE
T ss_pred cccCCEEEEEEEcCCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEE
Confidence 99999999999999999999999764 5689999999999999999999999 99999999999999 7788999
Q ss_pred eeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhc
Q 043053 857 IADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKK 936 (1058)
Q Consensus 857 l~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 936 (1058)
|+|||+++..... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||.... .......+....
T Consensus 150 l~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~ 223 (304)
T 2jam_A 150 ITDFGLSKMEQNG----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET--ESKLFEKIKEGY 223 (304)
T ss_dssp BCSCSTTCCCCCB----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHCC
T ss_pred EccCCcceecCCC----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHHcCC
Confidence 9999999765432 2234569999999999999999999999999999999999999997542 222222222211
Q ss_pred CccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 043053 937 GIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLK 985 (1058)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~ 985 (1058)
...........+. .+.+++..||+.||++|||+++++++-.
T Consensus 224 --~~~~~~~~~~~~~------~~~~li~~~l~~dp~~Rps~~~~l~h~~ 264 (304)
T 2jam_A 224 --YEFESPFWDDISE------SAKDFICHLLEKDPNERYTCEKALSHPW 264 (304)
T ss_dssp --CCCCTTTTTTSCH------HHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred --CCCCccccccCCH------HHHHHHHHHcCCChhHCcCHHHHhcCcc
Confidence 1111111122222 2344788899999999999999998543
No 205
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=8.4e-38 Score=352.01 Aligned_cols=253 Identities=25% Similarity=0.359 Sum_probs=205.5
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.++|.+.+.||+|+||.||+| +..+++.||+|++..... ......+.+.+|+.++++++||||+++++++.
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~--------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 111 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL--------LKPHQREKMSMEISIHRSLAHQHVVGFHGFFE 111 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--------CSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhh--------cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence 368999999999999999999 555788999999854321 23345678999999999999999999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccc
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFG 861 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfG 861 (1058)
+.+..|+||||+++++|.+++... ..+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg 186 (335)
T 2owb_A 112 DNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFG 186 (335)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCT
T ss_pred cCCeEEEEEecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeecc
Confidence 999999999999999999998764 5789999999999999999999999 99999999999999999999999999
Q ss_pred cceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcccc
Q 043053 862 LAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVL 941 (1058)
Q Consensus 862 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1058)
+++...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+...
T Consensus 187 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~------ 256 (335)
T 2owb_A 187 LATKVEYDG--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL--KETYLRIKKN------ 256 (335)
T ss_dssp TCEECCSTT--CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHHT------
T ss_pred CceecccCc--ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH--HHHHHHHhcC------
Confidence 998765332 223456799999999999998999999999999999999999999975321 1111111111
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 942 DPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
........+. .+..++.+||+.||++|||++|++++-
T Consensus 257 ~~~~~~~~~~------~~~~li~~~l~~dp~~Rps~~ell~~~ 293 (335)
T 2owb_A 257 EYSIPKHINP------VAASLIQKMLQTDPTARPTINELLNDE 293 (335)
T ss_dssp CCCCCTTSCH------HHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred CCCCCccCCH------HHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 1111112222 233477889999999999999998753
No 206
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=343.57 Aligned_cols=258 Identities=19% Similarity=0.262 Sum_probs=201.2
Q ss_pred HHhhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEE
Q 043053 702 VLKCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCC 780 (1058)
Q Consensus 702 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 780 (1058)
+.++|.+.+.||+|+||.||+|. ..+++.||||++...... ......+.+.+|++++++++||||+++++++
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 75 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLR-------RIPNGEANVKKEIQLLRRLRHKNVIQLVDVL 75 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHH-------HSTTHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEecccccc-------ccchhHHHHHHHHHHHHhcCCCCeeEEEEEE
Confidence 45789999999999999999994 467899999998654321 1123467899999999999999999999998
Q ss_pred E--cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeee
Q 043053 781 W--NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIA 858 (1058)
Q Consensus 781 ~--~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~ 858 (1058)
. +....++||||+++| |.+++.......+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 76 ~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~ 151 (305)
T 2wtk_C 76 YNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKIS 151 (305)
T ss_dssp ECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred EcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEee
Confidence 5 345779999999876 88888776667899999999999999999999999 99999999999999999999999
Q ss_pred ccccceeccCCCcccccccccCcCCccCccccccCC--CCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhc
Q 043053 859 DFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMK--ITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKK 936 (1058)
Q Consensus 859 DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 936 (1058)
|||.+................||+.|+|||+..+.. ++.++||||+|+++|||++|+.||.... .......+...
T Consensus 152 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~i~~~- 228 (305)
T 2wtk_C 152 ALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN--IYKLFENIGKG- 228 (305)
T ss_dssp CCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHC-
T ss_pred ccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch--HHHHHHHHhcC-
Confidence 999998765433333344567999999999987644 3779999999999999999999997532 11222211111
Q ss_pred CccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 937 GIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
........+.. +.+++.+||+.||++|||+++++++-
T Consensus 229 -----~~~~~~~~~~~------l~~li~~~l~~dp~~Rps~~~ll~~~ 265 (305)
T 2wtk_C 229 -----SYAIPGDCGPP------LSDLLKGMLEYEPAKRFSIRQIRQHS 265 (305)
T ss_dssp -----CCCCCSSSCHH------HHHHHHHHTCSSTTTSCCHHHHHHSH
T ss_pred -----CCCCCCccCHH------HHHHHHHHccCChhhCCCHHHHhcCc
Confidence 11111222222 23477889999999999999998753
No 207
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.7e-37 Score=353.33 Aligned_cols=263 Identities=23% Similarity=0.359 Sum_probs=205.1
Q ss_pred HHHHhhccccceeccccceEEEEEEe-cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCccccee
Q 043053 700 EQVLKCLVDANVIGKGCSGVVYRADM-DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVRFL 777 (1058)
Q Consensus 700 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~ 777 (1058)
..+.++|.+.+.||+|+||.||+|.. .+|+.||||++....... .........+.+.+|+.+++++ +||||++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~---~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERL---SPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCC---CHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEcccccc---CHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 45667899999999999999999955 579999999985432100 0011123356789999999999 799999999
Q ss_pred eEEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeee
Q 043053 778 GCCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYI 857 (1058)
Q Consensus 778 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl 857 (1058)
+++......++||||++||+|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEE
Confidence 9999999999999999999999999863 5689999999999999999999999 9999999999999999999999
Q ss_pred eccccceeccCCCcccccccccCcCCccCcccccc------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHH
Q 043053 858 ADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYM------MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDW 931 (1058)
Q Consensus 858 ~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~ 931 (1058)
+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .......
T Consensus 242 ~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~--~~~~~~~ 316 (365)
T 2y7j_A 242 SDFGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR--QILMLRM 316 (365)
T ss_dssp CCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHH
T ss_pred EecCcccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC--HHHHHHH
Confidence 9999998775432 2345679999999998753 357889999999999999999999997532 1122222
Q ss_pred HHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 932 VRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 932 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
+.... .. .........+. .+.+++.+||+.||++|||+++++++
T Consensus 317 i~~~~-~~-~~~~~~~~~~~------~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 317 IMEGQ-YQ-FSSPEWDDRSS------TVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHHTC-CC-CCHHHHSSSCH------HHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhCC-CC-CCCcccccCCH------HHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 21111 00 00000011111 23457888999999999999999874
No 208
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.8e-37 Score=342.16 Aligned_cols=250 Identities=26% Similarity=0.369 Sum_probs=197.2
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
+.|.+.+.||+|+||.||+| +..++..||+|++.... ......+.+.+|+.++++++||||+++++++..
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~---------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 96 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK---------LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWES 96 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG---------SCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchh---------hCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecc
Confidence 45788899999999999999 55678999999985432 223446789999999999999999999999865
Q ss_pred ----CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCC--eEeCCCCCCcEEEc-CCCCe
Q 043053 783 ----RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPP--IVHRDIKANNILIG-LEFEP 855 (1058)
Q Consensus 783 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivHrDikp~Nill~-~~~~~ 855 (1058)
....++||||+++|+|.+++... ..+++..++.++.|++.||+|||+. + |+||||||+||+++ .++.+
T Consensus 97 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~ 171 (290)
T 1t4h_A 97 TVKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSV 171 (290)
T ss_dssp ESSSCEEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCE
T ss_pred ccCCCceEEEEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCE
Confidence 34479999999999999999864 5689999999999999999999998 7 99999999999998 78999
Q ss_pred eeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhh
Q 043053 856 YIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQK 935 (1058)
Q Consensus 856 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 935 (1058)
||+|||++...... ......||+.|+|||++.+ .++.++||||+|+++|+|++|+.||...... ..........
T Consensus 172 kl~Dfg~~~~~~~~----~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~ 245 (290)
T 1t4h_A 172 KIGDLGLATLKRAS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-AQIYRRVTSG 245 (290)
T ss_dssp EECCTTGGGGCCTT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-HHHHHHHTTT
T ss_pred EEeeCCCccccccc----ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcH-HHHHHHHhcc
Confidence 99999999754432 2234569999999998764 5899999999999999999999999754221 1111111111
Q ss_pred cCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 936 KGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
. .........+. .+.+++..||+.||++|||+++++++
T Consensus 246 ~----~~~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 246 V----KPASFDKVAIP------EVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp C----CCGGGGGCCCH------HHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred C----CccccCCCCCH------HHHHHHHHHccCChhhCCCHHHHhhC
Confidence 1 11111111112 23457888999999999999999874
No 209
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.5e-37 Score=368.17 Aligned_cols=257 Identities=23% Similarity=0.287 Sum_probs=204.1
Q ss_pred HHHHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceee
Q 043053 700 EQVLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLG 778 (1058)
Q Consensus 700 ~~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~ 778 (1058)
..+.++|.+.+.||+|+||+||+| +..+++.||||++..... .......+.+|++++++++||||+++++
T Consensus 18 g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~~~E~~~l~~l~hpniv~~~~ 88 (486)
T 3mwu_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA---------KNKDTSTILREVELLKKLDHPNIMKLFE 88 (486)
T ss_dssp CHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHH---------BCSCHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred CChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccc---------cchHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 356789999999999999999999 455899999999854321 1223578899999999999999999999
Q ss_pred EEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEc---CCCCe
Q 043053 779 CCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIG---LEFEP 855 (1058)
Q Consensus 779 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~---~~~~~ 855 (1058)
++.+....|+||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+
T Consensus 89 ~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~ 163 (486)
T 3mwu_A 89 ILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDI 163 (486)
T ss_dssp EEECSSEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCE
T ss_pred EEEcCCEEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCE
Confidence 999999999999999999999999764 5689999999999999999999999 999999999999995 45679
Q ss_pred eeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhh
Q 043053 856 YIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQK 935 (1058)
Q Consensus 856 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 935 (1058)
||+|||+++...... .....+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.... .......+...
T Consensus 164 kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~~i~~~ 237 (486)
T 3mwu_A 164 KIIDFGLSTCFQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN--EYDILKRVETG 237 (486)
T ss_dssp EECSCSCTTTBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHT
T ss_pred EEEECCcCeECCCCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhC
Confidence 999999998665432 2345679999999999876 58999999999999999999999997542 22222222221
Q ss_pred cCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 936 KGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
.. ..+.......+. .+.+++..||+.||++|||+.+++++-
T Consensus 238 ~~--~~~~~~~~~~s~------~~~~li~~~L~~dp~~R~t~~~~l~hp 278 (486)
T 3mwu_A 238 KY--AFDLPQWRTISD------DAKDLIRKMLTFHPSLRITATQCLEHP 278 (486)
T ss_dssp CC--CSCSGGGGGSCH------HHHHHHHHHTCSSTTTSCCHHHHHHCH
T ss_pred CC--CCCCcccCCCCH------HHHHHHHHHcCCChhhCcCHHHHhcCH
Confidence 11 111111111121 234578889999999999999999864
No 210
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3.9e-38 Score=345.36 Aligned_cols=256 Identities=21% Similarity=0.325 Sum_probs=201.7
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.++|.+.+.||+|+||.||+| +..+++.||+|++.... ......+.+.+|++++++++||||+++++++.
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 75 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGS---------MTEAEKQMLVSEVNLLRELKHPNIVRYYDRII 75 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTT---------CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEccc---------CCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEe
Confidence 368999999999999999999 44579999999985331 22344678999999999999999999999885
Q ss_pred c--CCCceEEEEecCCCChhhhhhhcC--CCCCCHHHHHHHHHHHHHHhhcccccCCCC-----eEeCCCCCCcEEEcCC
Q 043053 782 N--RNNRLLMYDYMPNGSLGSLLHERT--GNALEWELRYQILLGAAQGLAYLHHDCVPP-----IVHRDIKANNILIGLE 852 (1058)
Q Consensus 782 ~--~~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-----ivHrDikp~Nill~~~ 852 (1058)
+ ....++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+. + |+||||||+||+++.+
T Consensus 76 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~ 152 (279)
T 2w5a_A 76 DRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGK 152 (279)
T ss_dssp EGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSS
T ss_pred cCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCC
Confidence 4 567899999999999999997532 34589999999999999999999998 7 9999999999999999
Q ss_pred CCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHH
Q 043053 853 FEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWV 932 (1058)
Q Consensus 853 ~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~ 932 (1058)
+.+||+|||.++...... .......||+.|+|||++.+..++.++||||||+++|+|++|+.||.... .......+
T Consensus 153 ~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~i 228 (279)
T 2w5a_A 153 QNVKLGDFGLARILNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS--QKELAGKI 228 (279)
T ss_dssp SCEEECCCCHHHHC---C--HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHH
T ss_pred CCEEEecCchheeecccc--ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC--HHHHHHHH
Confidence 999999999998664432 12234568999999999998889999999999999999999999997542 22222222
Q ss_pred HhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 043053 933 RQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLK 985 (1058)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~ 985 (1058)
..... +......+. .+..++.+||+.||++|||++|++++++
T Consensus 229 ~~~~~-----~~~~~~~~~------~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 229 REGKF-----RRIPYRYSD------ELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp HHTCC-----CCCCTTSCH------HHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred hhccc-----ccCCcccCH------HHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 22211 111122222 2334778899999999999999998654
No 211
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.1e-37 Score=347.63 Aligned_cols=264 Identities=28% Similarity=0.410 Sum_probs=205.9
Q ss_pred hhccccceeccccceEEEEEE-----ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceee
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-----MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLG 778 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~ 778 (1058)
++|.+.+.||+|+||.||+|. ..+++.||||++... .....+.+.+|++++++++||||+++++
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-----------~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 109 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-----------TEEHLRDFEREIEILKSLQHDNIVKYKG 109 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC-----------CSHHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC-----------CHHHHHHHHHHHHHHHhCCCCCeeeEEE
Confidence 578999999999999999996 347899999998532 2344678999999999999999999999
Q ss_pred EEEcCC--CceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCee
Q 043053 779 CCWNRN--NRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPY 856 (1058)
Q Consensus 779 ~~~~~~--~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~k 856 (1058)
++...+ ..++||||+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 110 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~k 185 (326)
T 2w1i_A 110 VCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVK 185 (326)
T ss_dssp EECC----CCEEEECCCTTCBHHHHHHHS-TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEE
T ss_pred EEEecCCCceEEEEECCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEE
Confidence 987654 679999999999999999864 35689999999999999999999999 999999999999999999999
Q ss_pred eeccccceeccCCCcc-cccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCC----------CCC
Q 043053 857 IADFGLAKLVDDGDFA-RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTI----------PDG 925 (1058)
Q Consensus 857 l~DfGl~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~----------~~~ 925 (1058)
|+|||+++........ .......++..|+|||++.+..++.++||||||+++|||++|..||.... ...
T Consensus 186 L~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~ 265 (326)
T 2w1i_A 186 IGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 265 (326)
T ss_dssp ECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCT
T ss_pred EecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccch
Confidence 9999999877543321 12234457788999999988889999999999999999999999986320 000
Q ss_pred hhHH-HHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 926 SHVV-DWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 926 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
.... ......... .........+ .+ +..++..||+.||++|||+.++++.|+++..+
T Consensus 266 ~~~~~~~~~~~~~~--~~~~~~~~~~---~~---l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 266 QMIVFHLIELLKNN--GRLPRPDGCP---DE---IYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHHHHHHHHHHTT--CCCCCCTTCC---HH---HHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhhcC--CCCCCCCccc---HH---HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 0000 000110000 0111111222 22 33478889999999999999999999988764
No 212
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=6.1e-38 Score=350.69 Aligned_cols=261 Identities=24% Similarity=0.352 Sum_probs=201.3
Q ss_pred hhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|.+.+.||+|+||.||+|. ..+++.||||++... .....+.+.+|++++++++||||+++++++..
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 97 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH-----------EQQDREEAQREADMHRLFNHPNILRLVAYCLR 97 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES-----------SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC-----------CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEe
Confidence 579999999999999999994 478999999988432 23446789999999999999999999999873
Q ss_pred ----CCCceEEEEecCCCChhhhhhhc--CCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCee
Q 043053 783 ----RNNRLLMYDYMPNGSLGSLLHER--TGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPY 856 (1058)
Q Consensus 783 ----~~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~k 856 (1058)
....++||||+++|+|.+++... ....+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 98 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~k 174 (317)
T 2buj_A 98 ERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPV 174 (317)
T ss_dssp EETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEE
T ss_pred ccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEE
Confidence 34678999999999999999763 346789999999999999999999999 999999999999999999999
Q ss_pred eeccccceeccCCCcc-------cccccccCcCCccCccccccCC---CCcccchhhHHHHHHHHHhCCCCCCCCCCCCh
Q 043053 857 IADFGLAKLVDDGDFA-------RSSNTVAGSYGYIAPEYGYMMK---ITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGS 926 (1058)
Q Consensus 857 l~DfGl~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 926 (1058)
|+|||++......... .......||+.|+|||++.+.. ++.++||||||+++|||++|+.||........
T Consensus 175 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~ 254 (317)
T 2buj_A 175 LMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD 254 (317)
T ss_dssp ECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS
T ss_pred EEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc
Confidence 9999998765321100 0112345799999999987544 68899999999999999999999964211111
Q ss_pred hHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhh
Q 043053 927 HVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKH 989 (1058)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~ 989 (1058)
......... .........+. .+..++..||+.||++|||+++++++|+.+..
T Consensus 255 ~~~~~~~~~-----~~~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 255 SVALAVQNQ-----LSIPQSPRHSS------ALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp CHHHHHHCC-------CCCCTTSCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred hhhHHhhcc-----CCCCccccCCH------HHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 222211111 01111111222 23447788999999999999999999988764
No 213
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-37 Score=352.83 Aligned_cols=257 Identities=23% Similarity=0.321 Sum_probs=193.6
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.++|...+.||+|+||.||+| +..+|+.||||++.... ......+++.+|++++++++||||+++++++.
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~---------~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 94 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF---------QSELFAKRAYRELRLLKHMRHENVIGLLDVFT 94 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT---------SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEEC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc---------cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEe
Confidence 367999999999999999999 55789999999985331 23345678899999999999999999999997
Q ss_pred cCC------CceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCe
Q 043053 782 NRN------NRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEP 855 (1058)
Q Consensus 782 ~~~------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~ 855 (1058)
... ..|+||||+ +++|.++++. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+
T Consensus 95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~ 167 (367)
T 1cm8_A 95 PDETLDDFTDFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCEL 167 (367)
T ss_dssp SCSSTTTCCCCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCE
T ss_pred cCCccccCceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCE
Confidence 653 359999999 8899999976 4689999999999999999999999 99999999999999999999
Q ss_pred eeeccccceeccCCCcccccccccCcCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHh
Q 043053 856 YIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQ 934 (1058)
Q Consensus 856 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~ 934 (1058)
||+|||+++..... ....+||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ..+......
T Consensus 168 kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~ 241 (367)
T 1cm8_A 168 KILDFGLARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMKV 241 (367)
T ss_dssp EECCCTTCEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHH
T ss_pred EEEeeecccccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHh
Confidence 99999999875432 335678999999999877 67899999999999999999999999754211 111111110
Q ss_pred hcC---------------------ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 935 KKG---------------------IQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 935 ~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
... .......+....+... ..+.+++.+||..||++|||++|++++-
T Consensus 242 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ll~~mL~~dP~~R~t~~e~l~hp 309 (367)
T 1cm8_A 242 TGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNAS---PLAVNLLEKMLVLDAEQRVTAGEALAHP 309 (367)
T ss_dssp HCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCC---HHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred cCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCC---HHHHHHHHHHccCChhHCCCHHHHhcCh
Confidence 000 0000000000001111 1244578889999999999999999853
No 214
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.7e-37 Score=342.12 Aligned_cols=249 Identities=20% Similarity=0.270 Sum_probs=198.5
Q ss_pred HHHhhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccceee
Q 043053 701 QVLKCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVRFLG 778 (1058)
Q Consensus 701 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~ 778 (1058)
...++|.+.+.||+|+||+||+|. ..+++.||||++.... .......++.+|+..+.++ +||||+++++
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~ 78 (289)
T 1x8b_A 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPL---------AGSVDEQNALREVYAHAVLGQHSHVVRYFS 78 (289)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCC---------TTSHHHHHHHHHHHHHHHSCSCTTBCCEEE
T ss_pred cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccc---------cccHHHHHHHHHHHHHHHhCCCCCeeeeee
Confidence 355889999999999999999994 4589999999985331 2233467888999999999 8999999999
Q ss_pred EEEcCCCceEEEEecCCCChhhhhhhcC--CCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCC----
Q 043053 779 CCWNRNNRLLMYDYMPNGSLGSLLHERT--GNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLE---- 852 (1058)
Q Consensus 779 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~---- 852 (1058)
++.+++..++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.+
T Consensus 79 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~ 155 (289)
T 1x8b_A 79 AWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPN 155 (289)
T ss_dssp EEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC------
T ss_pred eeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCc
Confidence 9999999999999999999999997642 36689999999999999999999999 99999999999999844
Q ss_pred ---------------CCeeeeccccceeccCCCcccccccccCcCCccCccccccC-CCCcccchhhHHHHHHHHHhCCC
Q 043053 853 ---------------FEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSYGVVVLEVLTGKQ 916 (1058)
Q Consensus 853 ---------------~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvvl~elltg~~ 916 (1058)
..+||+|||.+....... ...||+.|+|||++.+. .++.++||||||+++|||++|..
T Consensus 156 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~ 229 (289)
T 1x8b_A 156 AASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEP 229 (289)
T ss_dssp --------------CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccccccccccccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCC
Confidence 479999999998765432 34589999999998765 56689999999999999999987
Q ss_pred CCCCCCCCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 917 PIDPTIPDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 917 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
|+... ... ..+.... .+......+.. +.+++..||+.||++|||+++++++
T Consensus 230 ~~~~~----~~~-~~~~~~~-----~~~~~~~~~~~------~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 230 LPRNG----DQW-HEIRQGR-----LPRIPQVLSQE------FTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp CCSSS----HHH-HHHHTTC-----CCCCSSCCCHH------HHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CCcch----hHH-HHHHcCC-----CCCCCcccCHH------HHHHHHHHhCCCcccCCCHHHHhhC
Confidence 76422 111 1121111 11222222222 3347778999999999999999875
No 215
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.2e-37 Score=369.17 Aligned_cols=257 Identities=23% Similarity=0.308 Sum_probs=206.1
Q ss_pred HHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEE
Q 043053 702 VLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCC 780 (1058)
Q Consensus 702 ~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 780 (1058)
+.++|...++||+|+||.||+| +..+|+.||||++..... ......+.+.+|++++++++||||+++++++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 95 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQV--------KQKTDKESLLREVQLLKQLDHPNIMKLYEFF 95 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CBSSCHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhc--------ccchHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 5578999999999999999999 455899999999854321 2233467899999999999999999999999
Q ss_pred EcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEE---cCCCCeee
Q 043053 781 WNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILI---GLEFEPYI 857 (1058)
Q Consensus 781 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill---~~~~~~kl 857 (1058)
.+....|+||||+++|+|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||
T Consensus 96 ~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl 170 (484)
T 3nyv_A 96 EDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRI 170 (484)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEE
T ss_pred EeCCEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEE
Confidence 9999999999999999999999763 5789999999999999999999999 99999999999999 56789999
Q ss_pred eccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcC
Q 043053 858 ADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKG 937 (1058)
Q Consensus 858 ~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 937 (1058)
+|||+++...... .....+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.... .......+.....
T Consensus 171 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~~i~~~~~ 244 (484)
T 3nyv_A 171 IDFGLSTHFEASK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN--EYDILKKVEKGKY 244 (484)
T ss_dssp CCTTHHHHBCCCC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHCCC
T ss_pred EeeeeeEEccccc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHHcCCC
Confidence 9999998765432 2345679999999999876 68999999999999999999999997542 2222222222111
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 043053 938 IQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLK 985 (1058)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~ 985 (1058)
..........+. .+.+++..||++||++|||++|++++-.
T Consensus 245 --~~~~~~~~~~s~------~~~~li~~~L~~dp~~R~s~~e~l~h~~ 284 (484)
T 3nyv_A 245 --TFELPQWKKVSE------SAKDLIRKMLTYVPSMRISARDALDHEW 284 (484)
T ss_dssp --CCCSGGGGGSCH------HHHHHHHHHTCSSGGGSCCHHHHHTSHH
T ss_pred --CCCCcccccCCH------HHHHHHHHHCCCChhHCcCHHHHhhChh
Confidence 111111111122 2345788899999999999999997543
No 216
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2e-37 Score=348.49 Aligned_cols=266 Identities=24% Similarity=0.368 Sum_probs=199.1
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.++|...+.||+|+||.||+| +..+|+.||||++... .......+.+.+|+.++++++||||+++++++.
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---------~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 94 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLES---------DDDKMVKKIAMREIKLLKQLRHENLVNLLEVCK 94 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESC---------SSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecC---------CCchHHHHHHHHHHHHHhhCCCCCEeeEEEEee
Confidence 478999999999999999999 4556999999988433 123344677889999999999999999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccc
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFG 861 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfG 861 (1058)
+.+..++||||+++++|.++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 95 ~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 169 (331)
T 4aaa_A 95 KKKRWYLVFEFVDHTILDDLELF--PNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFG 169 (331)
T ss_dssp ETTEEEEEEECCSEEHHHHHHHS--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred cCCEEEEEEecCCcchHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCC
Confidence 99999999999999999988764 35689999999999999999999999 99999999999999999999999999
Q ss_pred cceeccCCCcccccccccCcCCccCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhc----
Q 043053 862 LAKLVDDGDFARSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKK---- 936 (1058)
Q Consensus 862 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~---- 936 (1058)
+++...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... ...........
T Consensus 170 ~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~ 246 (331)
T 4aaa_A 170 FARTLAAPG--EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI-DQLYHIMMCLGNLIP 246 (331)
T ss_dssp TC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCH
T ss_pred CceeecCCc--cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCCh
Confidence 998654432 223456799999999998765 7889999999999999999999999754221 11111111000
Q ss_pred -----------CccccCCCCCCCCchhH---HHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 043053 937 -----------GIQVLDPSLLSRPESEI---DEMLQALGVALLCVNASPDERPTMKDVAAMLK 985 (1058)
Q Consensus 937 -----------~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~ 985 (1058)
......+......+... .....+.+++.+||+.||++|||++|++++-.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~ 309 (331)
T 4aaa_A 247 RHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDF 309 (331)
T ss_dssp HHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHH
T ss_pred hhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCch
Confidence 00000111111100000 00123445888999999999999999998644
No 217
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=4.1e-38 Score=349.74 Aligned_cols=259 Identities=26% Similarity=0.391 Sum_probs=183.1
Q ss_pred hhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|.+.+.||+|+||.||+|. ..+++.||||++... ......+++.+|++++++++||||+++++++..
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 84 (303)
T 2vwi_A 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLE----------KCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVV 84 (303)
T ss_dssp CCCEEEEECC---CCCEEEEEC----CEEEEECCC--------------------------CCCCCCCTTBCCEEEEEES
T ss_pred hhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhh----------hcchhHHHHHHHHHHHhhcCCCCEeeEEEEEee
Confidence 678999999999999999994 457899999988533 112335678899999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhc------CCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCee
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHER------TGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPY 856 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~k 856 (1058)
++..++||||+++|+|.+++... ....+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 85 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~k 161 (303)
T 2vwi_A 85 KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQ 161 (303)
T ss_dssp SSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEE
T ss_pred cCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEE
Confidence 99999999999999999999741 245689999999999999999999999 999999999999999999999
Q ss_pred eeccccceeccCCCc---ccccccccCcCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHH
Q 043053 857 IADFGLAKLVDDGDF---ARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWV 932 (1058)
Q Consensus 857 l~DfGl~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~ 932 (1058)
|+|||++........ ........||+.|+|||++.+ ..++.++||||+|+++|||++|+.||....+. ......
T Consensus 162 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~ 239 (303)
T 2vwi_A 162 IADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM--KVLMLT 239 (303)
T ss_dssp ECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG--GHHHHH
T ss_pred EEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh--hHHHHH
Confidence 999999876543221 112234579999999998875 56889999999999999999999999764322 111111
Q ss_pred HhhcCcc----ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 933 RQKKGIQ----VLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 933 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
....... ..++......+. .+..++.+||+.||++|||+++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 240 LQNDPPSLETGVQDKEMLKKYGK------SFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp HTSSCCCTTC-----CCCCCCCH------HHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hccCCCccccccccchhhhhhhH------HHHHHHHHHccCChhhCcCHHHHhhC
Confidence 1111100 011111122222 23347788999999999999999875
No 218
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.2e-37 Score=343.87 Aligned_cols=263 Identities=25% Similarity=0.385 Sum_probs=196.3
Q ss_pred hhccccceeccccceEEEEEEec--CCc--EEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 704 KCLVDANVIGKGCSGVVYRADMD--NGE--VIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
++|.+.+.||+|+||+||+|.+. +++ .||||++..... ......+.+.+|++++++++||||++++++
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 89 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVL--------SQPEAMDDFIREVNAMHSLDHRNLIRLYGV 89 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC----------------CHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCcc--------CCHHHHHHHHHHHHHHHhCCCCCcccEEEE
Confidence 68999999999999999999542 333 689998854321 233456889999999999999999999999
Q ss_pred EEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeec
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIAD 859 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~D 859 (1058)
+..+. .++||||+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 90 ~~~~~-~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~D 164 (291)
T 1u46_A 90 VLTPP-MKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGD 164 (291)
T ss_dssp ECSSS-CEEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECC
T ss_pred EccCC-ceeeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcc
Confidence 98654 89999999999999999864 35689999999999999999999999 999999999999999999999999
Q ss_pred cccceeccCCCcc-cccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcC
Q 043053 860 FGLAKLVDDGDFA-RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKG 937 (1058)
Q Consensus 860 fGl~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 937 (1058)
||+++........ .......+|..|+|||+..+..++.++||||||+++|||++ |+.||.... .......+....
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~~~~~~~~~~~- 241 (291)
T 1u46_A 165 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN--GSQILHKIDKEG- 241 (291)
T ss_dssp CTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC--HHHHHHHHHTSC-
T ss_pred ccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC--HHHHHHHHHccC-
Confidence 9999876543321 22334567889999999988888999999999999999999 999997542 222222221111
Q ss_pred ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043053 938 IQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHER 991 (1058)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~ 991 (1058)
.........+. .+.+++..||+.||++|||++++++.|+++....
T Consensus 242 ---~~~~~~~~~~~------~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 242 ---ERLPRPEDCPQ------DIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp ---CCCCCCTTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred ---CCCCCCcCcCH------HHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 11111112222 2334778899999999999999999998876543
No 219
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=7e-38 Score=356.77 Aligned_cols=200 Identities=27% Similarity=0.456 Sum_probs=175.1
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|...+.||+|+||+||+| +..+++.||+|++... ......+.+.+|+.++++++||||+++++++.+
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~----------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 102 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE----------IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 102 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECC----------CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccc----------cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE
Confidence 57899999999999999999 5558999999998532 233456789999999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
++..++||||+++|+|.++++.. ..+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 178 (360)
T 3eqc_A 103 DGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGV 178 (360)
T ss_dssp TTEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCC
T ss_pred CCEEEEEEECCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCC
Confidence 99999999999999999999864 56899999999999999999999831 799999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCC
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPT 921 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 921 (1058)
+..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 179 ~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 179 SGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp CHHHHH----HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred Cccccc----ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 875532 1233457999999999999999999999999999999999999999753
No 220
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.6e-37 Score=363.12 Aligned_cols=359 Identities=20% Similarity=0.238 Sum_probs=196.7
Q ss_pred ccccCCCCCcEEEccCCcCCCCCCCCCCCCCcccEEecCCCCCCCCCChhhcCcccCCEEeccccCCCCccccccccchh
Q 043053 18 TNLSSFKHLQTLVISDANLTGSIPFDIGDCVGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNSNQLTGKIPVELSNCKS 97 (1058)
Q Consensus 18 ~~~~~~~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~ 97 (1058)
..++++++|++|++++|.+++ +| .++.+++|++|++++|+++ .+| ++++++|++|+|++|++++ +| ++++++
T Consensus 36 ~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~-~~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~ 107 (457)
T 3bz5_A 36 ISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNIT-TLD--LSQNTNLTYLACDSNKLTN-LD--VTPLTK 107 (457)
T ss_dssp EEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCS-CCC--CTTCTTCSEEECCSSCCSC-CC--CTTCTT
T ss_pred cChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCC-eEc--cccCCCCCEEECcCCCCce-ee--cCCCCc
Confidence 344455555555555555542 33 3555555555555555555 233 4555555555555555542 22 444444
Q ss_pred hhHHhhhhccccCCChhhhcccccchhhhcCCCccccCCCCccccCCCCCceecccCccccccCCccccCCCccceeeee
Q 043053 98 LRKLLLFDNALAGNIPAELGRLSNLEEMRAGGNKDIVGKIPAELGDCSNMTALGLADTQVSGSLPASLGKLSKLQTLSIY 177 (1058)
Q Consensus 98 L~~L~L~~n~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~ 177 (1058)
|++|++++|.+. .++ ++.+++|++|++++|++++. .++++++|++|+++
T Consensus 108 L~~L~L~~N~l~--------------------------~l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~ 156 (457)
T 3bz5_A 108 LTYLNCDTNKLT--------------------------KLD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCH 156 (457)
T ss_dssp CCEEECCSSCCS--------------------------CCC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECT
T ss_pred CCEEECCCCcCC--------------------------eec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECC
Confidence 444444444443 222 44455555555555555532 25556666666666
Q ss_pred ccccccccCccccCCCCccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCcC
Q 043053 178 TTMISGEIPAEIGNCSELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTI 257 (1058)
Q Consensus 178 ~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 257 (1058)
+|...+.+ .++.+++|+.|++++|.+++ +| ++.+++|+.|++++|.+++. .+..+++|++|++++|++++ +
T Consensus 157 ~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-i 227 (457)
T 3bz5_A 157 LNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-I 227 (457)
T ss_dssp TCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-C
T ss_pred CCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-c
Confidence 66433333 35566666666666666664 33 55666666666666666543 25566666666666666664 3
Q ss_pred CccccccCCcceeecccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccC
Q 043053 258 PLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCS 337 (1058)
Q Consensus 258 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 337 (1058)
| ++.+++|+.|++++|++++.. +..+++|+.|++++|++ +.|++++|.+.+.+| +..++
T Consensus 228 p--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n~L--------------~~L~l~~n~~~~~~~--~~~l~ 286 (457)
T 3bz5_A 228 D--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQTDL--------------LEIDLTHNTQLIYFQ--AEGCR 286 (457)
T ss_dssp C--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTCCC--------------SCCCCTTCTTCCEEE--CTTCT
T ss_pred C--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCCCC--------------CEEECCCCccCCccc--ccccc
Confidence 3 556666666666666666533 23444555555555432 334455555444443 35566
Q ss_pred cccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeecc
Q 043053 338 NLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLS 417 (1058)
Q Consensus 338 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 417 (1058)
+|+.|++++|...+.+|. ..++|+.|++++| ++|+.|++++|+|+++ .++.+++|+.|+++
T Consensus 287 ~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l---~l~~l~~L~~L~l~ 347 (457)
T 3bz5_A 287 KIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL---DVSHNTKLKSLSCV 347 (457)
T ss_dssp TCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC---CCTTCTTCSEEECC
T ss_pred cCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc---ccccCCcCcEEECC
Confidence 777777777766555542 2234444443333 5667777777777764 26666777777777
Q ss_pred CccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccc
Q 043053 418 SNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASL 477 (1058)
Q Consensus 418 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 477 (1058)
+|+|++ ++.|..|++++|.++|. ..+..|+.+++++|+++|.+|..+
T Consensus 348 ~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~ 394 (457)
T 3bz5_A 348 NAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDL 394 (457)
T ss_dssp SSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTC
T ss_pred CCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhH
Confidence 777663 24556666666666653 234455566666666666665443
No 221
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.3e-37 Score=347.81 Aligned_cols=256 Identities=21% Similarity=0.262 Sum_probs=193.6
Q ss_pred hhcccc-ceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccceeeEE
Q 043053 704 KCLVDA-NVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVRFLGCC 780 (1058)
Q Consensus 704 ~~~~~~-~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 780 (1058)
+.|.+. +.||+|+||+||+| +..+++.||||++... .....+.+.+|++++.++ +||||+++++++
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----------~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~ 80 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ-----------PGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECC-----------SSCCHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeC-----------cchhHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 567774 78999999999999 4568999999998432 223467889999999985 799999999999
Q ss_pred EcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCC---eee
Q 043053 781 WNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFE---PYI 857 (1058)
Q Consensus 781 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~---~kl 857 (1058)
.+++..++||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||
T Consensus 81 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl 155 (316)
T 2ac3_A 81 EEEDRFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKI 155 (316)
T ss_dssp EETTEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEE
T ss_pred eeCCEEEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEE
Confidence 9999999999999999999999874 5689999999999999999999999 9999999999999998776 999
Q ss_pred eccccceeccCCCc-----ccccccccCcCCccCcccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCC--
Q 043053 858 ADFGLAKLVDDGDF-----ARSSNTVAGSYGYIAPEYGYM-----MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDG-- 925 (1058)
Q Consensus 858 ~DfGl~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~-- 925 (1058)
+|||+++....... .......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||.......
T Consensus 156 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 235 (316)
T 2ac3_A 156 CDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG 235 (316)
T ss_dssp CCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSC
T ss_pred EEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccc
Confidence 99999876542211 112234569999999999865 557889999999999999999999997653321
Q ss_pred -----------hhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 926 -----------SHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 926 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
......+.... . ..........+ ..+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~i~~~~-~-~~~~~~~~~~~------~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 236 WDRGEACPACQNMLFESIQEGK-Y-EFPDKDWAHIS------CAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp C----CCHHHHHHHHHHHHHCC-C-CCCHHHHTTSC------HHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccccccchhHHHHHHHHHhccC-c-ccCchhcccCC------HHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 01111111110 0 00000001111 123457888999999999999999875
No 222
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2e-37 Score=353.97 Aligned_cols=261 Identities=23% Similarity=0.262 Sum_probs=191.9
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.++|...+.||+|+||.||+| +..+++.||||++.... ......+.+.+|+.+++.++||||+++++++.
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~ 94 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF---------QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 94 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT---------SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc---------CChHHHHHHHHHHHHHHhcCCCCccceEEeec
Confidence 468999999999999999999 56679999999985321 23344678899999999999999999999997
Q ss_pred cCC------CceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCe
Q 043053 782 NRN------NRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEP 855 (1058)
Q Consensus 782 ~~~------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~ 855 (1058)
..+ ..|+||||+++ +|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 95 ~~~~~~~~~~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~ 166 (371)
T 2xrw_A 95 PQKSLEEFQDVYIVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTL 166 (371)
T ss_dssp SCCSTTTCCEEEEEEECCSE-EHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCE
T ss_pred cccccccccceEEEEEcCCC-CHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCE
Confidence 655 56999999975 78888853 488999999999999999999999 99999999999999999999
Q ss_pred eeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhh
Q 043053 856 YIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQK 935 (1058)
Q Consensus 856 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 935 (1058)
||+|||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+...
T Consensus 167 kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~~ 241 (371)
T 2xrw_A 167 KILDFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH--IDQWNKVIEQ 241 (371)
T ss_dssp EECCCCC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHC-
T ss_pred EEEEeecccccccc---cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHH
Confidence 99999999865432 223356799999999999999999999999999999999999999975421 1111111000
Q ss_pred cCcc----------------ccCCC------------CCCCCch--hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 043053 936 KGIQ----------------VLDPS------------LLSRPES--EIDEMLQALGVALLCVNASPDERPTMKDVAAMLK 985 (1058)
Q Consensus 936 ~~~~----------------~~~~~------------~~~~~~~--~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~ 985 (1058)
.... ...+. ....... .......+.+++.+||+.||++|||++|++++-.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 321 (371)
T 2xrw_A 242 LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 321 (371)
T ss_dssp CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred hCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcc
Confidence 0000 00000 0000000 1111234567899999999999999999998654
No 223
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3e-37 Score=345.74 Aligned_cols=264 Identities=21% Similarity=0.295 Sum_probs=200.0
Q ss_pred HHHHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceee
Q 043053 700 EQVLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLG 778 (1058)
Q Consensus 700 ~~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~ 778 (1058)
..+.++|.+.+.||+|+||.||+| +..+++.||||++........ ..........+.+|++++++++||||+++++
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 82 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIG---SAREADPALNVETEIEILKKLNHPCIIKIKN 82 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC------------------CHHHHHHHHHHCCCTTBCCEEE
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhc---ccccchhhhhHHHHHHHHHhCCCCCCceEee
Confidence 456789999999999999999999 556789999999864422110 0111223456889999999999999999999
Q ss_pred EEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCC---e
Q 043053 779 CCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFE---P 855 (1058)
Q Consensus 779 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~---~ 855 (1058)
++..+. .|+||||+++|+|.+++.. ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++. +
T Consensus 83 ~~~~~~-~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~ 156 (322)
T 2ycf_A 83 FFDAED-YYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLI 156 (322)
T ss_dssp EEESSS-EEEEEECCTTEETHHHHST--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCE
T ss_pred EEcCCc-eEEEEecCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeE
Confidence 987654 8999999999999999975 46789999999999999999999999 9999999999999987664 9
Q ss_pred eeeccccceeccCCCcccccccccCcCCccCccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHH
Q 043053 856 YIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGY---MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWV 932 (1058)
Q Consensus 856 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~ 932 (1058)
||+|||+++...... ......||+.|+|||++. ...++.++|||||||++|+|++|+.||....... .....+
T Consensus 157 kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~ 232 (322)
T 2ycf_A 157 KITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQI 232 (322)
T ss_dssp EECCCTTCEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CHHHHH
T ss_pred EEccCccceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HHHHHH
Confidence 999999998765432 223456999999999864 5678899999999999999999999997553322 222222
Q ss_pred HhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 933 RQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
..... ...+......+. .+.+++.+||+.||++|||+++++++-
T Consensus 233 ~~~~~--~~~~~~~~~~~~------~~~~li~~~l~~dP~~Rps~~~~l~h~ 276 (322)
T 2ycf_A 233 TSGKY--NFIPEVWAEVSE------KALDLVKKLLVVDPKARFTTEEALRHP 276 (322)
T ss_dssp HHTCC--CCCHHHHTTSCH------HHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred HhCcc--ccCchhhhhcCH------HHHHHHHHHcccCHhhCCCHHHHhhCc
Confidence 22111 011111111121 234578889999999999999998753
No 224
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.6e-37 Score=342.48 Aligned_cols=264 Identities=26% Similarity=0.352 Sum_probs=200.7
Q ss_pred hhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|...+.||+|+||.||+|. ..+|+.||||++.... ......+.+.+|+.++++++||||+++++++..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 73 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT---------ETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 73 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC-----------------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCc---------cchhhHHHHHHHHHHHHHcCCCCeeeEEEEEec
Confidence 578999999999999999994 4579999999985432 223345788899999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
++..++||||++ |+|.+++.......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 74 ~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~ 149 (299)
T 2r3i_A 74 ENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 149 (299)
T ss_dssp TTEEEEEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTH
T ss_pred CCceEEEEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchh
Confidence 999999999997 5999999876556789999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCC-CCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCc---
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMK-ITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGI--- 938 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~--- 938 (1058)
+....... .......||+.|+|||++.+.. ++.++||||||+++|||++|+.||..... ..............
T Consensus 150 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~ 226 (299)
T 2r3i_A 150 ARAFGVPV--RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEV 226 (299)
T ss_dssp HHHHCCCS--BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCTT
T ss_pred hhhccCCc--cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHHHhCCCchh
Confidence 98765432 2233456899999999987765 78999999999999999999999975421 11111111111100
Q ss_pred --------cccCCCCCCCCchhHHH-----HHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 939 --------QVLDPSLLSRPESEIDE-----MLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 939 --------~~~~~~~~~~~~~~~~~-----~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
....+............ ...+.+++.+||+.||++|||+++++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp TSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00001110000000000 0123457888999999999999999874
No 225
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-37 Score=365.51 Aligned_cols=196 Identities=26% Similarity=0.327 Sum_probs=155.3
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|.+.+.||+|+||+||+| +..+++.||||++.... ......+++.+|+.++++++|||||++++++..
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~---------~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 123 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF---------EDLIDCKRILREIAILNRLNHDHVVKVLDIVIP 123 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTT---------SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCC
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh---------cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEec
Confidence 68999999999999999999 56689999999985331 233446789999999999999999999999854
Q ss_pred C-----CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeee
Q 043053 783 R-----NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYI 857 (1058)
Q Consensus 783 ~-----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl 857 (1058)
. ...|+||||+ +|+|.++++. ...+++..+..++.||+.||+|||+. +||||||||+|||++.++.+||
T Consensus 124 ~~~~~~~~~~lv~e~~-~~~L~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl 197 (458)
T 3rp9_A 124 KDVEKFDELYVVLEIA-DSDFKKLFRT--PVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKV 197 (458)
T ss_dssp SCTTTCCCEEEEECCC-SEEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEE
T ss_pred CCcccCceEEEEEecc-ccchhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEee
Confidence 3 4579999998 5699999975 46799999999999999999999999 9999999999999999999999
Q ss_pred eccccceeccCCCc-------------------------ccccccccCcCCccCcccc-ccCCCCcccchhhHHHHHHHH
Q 043053 858 ADFGLAKLVDDGDF-------------------------ARSSNTVAGSYGYIAPEYG-YMMKITEKSDVYSYGVVVLEV 911 (1058)
Q Consensus 858 ~DfGl~~~~~~~~~-------------------------~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGvvl~el 911 (1058)
+|||+++....... .......+||+.|+|||++ .+..++.++||||+||++|||
T Consensus 198 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~el 277 (458)
T 3rp9_A 198 CDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL 277 (458)
T ss_dssp CCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHH
T ss_pred cccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHH
Confidence 99999987643211 0123456789999999975 566799999999999999999
Q ss_pred HhC
Q 043053 912 LTG 914 (1058)
Q Consensus 912 ltg 914 (1058)
++|
T Consensus 278 ltg 280 (458)
T 3rp9_A 278 LNM 280 (458)
T ss_dssp HTT
T ss_pred HHh
Confidence 993
No 226
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.3e-37 Score=359.16 Aligned_cols=202 Identities=24% Similarity=0.307 Sum_probs=168.7
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.++|.+.+.||+|+||.||+| +..+++.||||++.... ......+++.+|+.++++++||||+++++++.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~---------~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~ 95 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF---------EDLIDCKRILREITILNRLKSDYIIRLYDLII 95 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT---------TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh---------cChHHHHHHHHHHHHHHHcCCCCcceEEEEEe
Confidence 368999999999999999999 56678999999985321 23344678999999999999999999999997
Q ss_pred cC-----CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCee
Q 043053 782 NR-----NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPY 856 (1058)
Q Consensus 782 ~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~k 856 (1058)
.. ...|+||||++ |+|.++++. ...+++..+..++.||++||+|||+. +|+||||||+|||++.++.+|
T Consensus 96 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~k 169 (432)
T 3n9x_A 96 PDDLLKFDELYIVLEIAD-SDLKKLFKT--PIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVK 169 (432)
T ss_dssp CSCTTTCCCEEEEEECCS-EEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEE
T ss_pred cCCCCcCCeEEEEEecCC-cCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEE
Confidence 66 46799999996 599999976 46799999999999999999999999 999999999999999999999
Q ss_pred eeccccceeccCCCcc--------------------cccccccCcCCccCcccc-ccCCCCcccchhhHHHHHHHHHhCC
Q 043053 857 IADFGLAKLVDDGDFA--------------------RSSNTVAGSYGYIAPEYG-YMMKITEKSDVYSYGVVVLEVLTGK 915 (1058)
Q Consensus 857 l~DfGl~~~~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGvvl~elltg~ 915 (1058)
|+|||+++........ ......+||+.|+|||++ .+..++.++||||+||++|||++|.
T Consensus 170 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~ 249 (432)
T 3n9x_A 170 VCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNML 249 (432)
T ss_dssp ECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTC
T ss_pred EccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcc
Confidence 9999999876543211 123567899999999985 5667999999999999999999865
Q ss_pred CCCC
Q 043053 916 QPID 919 (1058)
Q Consensus 916 ~P~~ 919 (1058)
.||.
T Consensus 250 ~p~~ 253 (432)
T 3n9x_A 250 QSHI 253 (432)
T ss_dssp TTTC
T ss_pred cccc
Confidence 5553
No 227
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.6e-37 Score=367.69 Aligned_cols=267 Identities=23% Similarity=0.301 Sum_probs=203.7
Q ss_pred HHHHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccC--CCCCcccchHHHHHHHHHHHcccCCCcccce
Q 043053 700 EQVLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAAN--GCSDEKSGVRDSFSAEIKTLGSIRHKNIVRF 776 (1058)
Q Consensus 700 ~~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~--~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 776 (1058)
..+.++|.+.+.||+|+||+||+| +..+++.||||++......... ......+...+.+.+|+.++++++||||+++
T Consensus 32 ~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~ 111 (504)
T 3q5i_A 32 GKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKL 111 (504)
T ss_dssp SCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCE
T ss_pred CCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence 345688999999999999999999 5567899999998644321100 0001112446789999999999999999999
Q ss_pred eeEEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCC---
Q 043053 777 LGCCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEF--- 853 (1058)
Q Consensus 777 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~--- 853 (1058)
++++.++...|+||||+++|+|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 112 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 186 (504)
T 3q5i_A 112 FDVFEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLL 186 (504)
T ss_dssp EEEEECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCS
T ss_pred EEEEEcCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCc
Confidence 99999999999999999999999999764 5689999999999999999999999 999999999999998876
Q ss_pred CeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHH
Q 043053 854 EPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVR 933 (1058)
Q Consensus 854 ~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~ 933 (1058)
.+||+|||+++...... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||.... .......+.
T Consensus 187 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~~i~ 260 (504)
T 3q5i_A 187 NIKIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN--DQDIIKKVE 260 (504)
T ss_dssp SEEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHH
T ss_pred cEEEEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHH
Confidence 69999999998775532 234567999999999876 468999999999999999999999997542 222222222
Q ss_pred hhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 043053 934 QKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLK 985 (1058)
Q Consensus 934 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~ 985 (1058)
... ...+.......+. .+.+++..||++||.+|||++|++++-.
T Consensus 261 ~~~--~~~~~~~~~~~s~------~~~~li~~~L~~dp~~R~t~~e~l~h~~ 304 (504)
T 3q5i_A 261 KGK--YYFDFNDWKNISD------EAKELIKLMLTYDYNKRCTAEEALNSRW 304 (504)
T ss_dssp HCC--CCCCHHHHTTSCH------HHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred cCC--CCCCccccCCCCH------HHHHHHHHHcCCChhHCCCHHHHhcCHh
Confidence 211 1111111111122 2445788899999999999999997543
No 228
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=348.45 Aligned_cols=253 Identities=23% Similarity=0.360 Sum_probs=193.8
Q ss_pred HhhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccceeeEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVRFLGCC 780 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 780 (1058)
.++|.+.+.||+|+||.||+|. ..+|+.||||++... ....+.+.+|+.+++++ +||||+++++++
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~------------~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 90 (326)
T 2x7f_A 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT------------GDEEEEIKQEINMLKKYSHHRNIATYYGAF 90 (326)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC------------SSTTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC------------cccHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence 4689999999999999999995 467999999998422 12347889999999999 799999999999
Q ss_pred Ec------CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCC
Q 043053 781 WN------RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFE 854 (1058)
Q Consensus 781 ~~------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~ 854 (1058)
.. ....++||||+++|+|.+++.......+++..++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~ 167 (326)
T 2x7f_A 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAE 167 (326)
T ss_dssp EECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCC
T ss_pred eeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCC
Confidence 76 45679999999999999999876556789999999999999999999999 9999999999999999999
Q ss_pred eeeeccccceeccCCCcccccccccCcCCccCccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHH
Q 043053 855 PYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGY-----MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVV 929 (1058)
Q Consensus 855 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~ 929 (1058)
+||+|||++....... .......||+.|+|||++. +..++.++|||||||++|+|++|+.||....+ ....
T Consensus 168 ~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~ 243 (326)
T 2x7f_A 168 VKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP--MRAL 243 (326)
T ss_dssp EEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH--HHHH
T ss_pred EEEeeCcCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH--HHHH
Confidence 9999999988654322 2233457999999999876 56788999999999999999999999965421 1111
Q ss_pred HHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 930 DWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
..+...... .......+. .+..++..||+.||++|||+++++++-
T Consensus 244 ~~~~~~~~~----~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~~ll~hp 288 (326)
T 2x7f_A 244 FLIPRNPAP----RLKSKKWSK------KFQSFIESCLVKNHSQRPATEQLMKHP 288 (326)
T ss_dssp HHHHHSCCC----CCSCSCSCH------HHHHHHHHHCCSSGGGSCCHHHHHTSH
T ss_pred HHhhcCccc----cCCccccCH------HHHHHHHHHhccChhhCCCHHHHhhCh
Confidence 111111110 001111222 233477889999999999999999854
No 229
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.9e-37 Score=360.22 Aligned_cols=199 Identities=25% Similarity=0.279 Sum_probs=174.7
Q ss_pred HHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc------CCCccc
Q 043053 702 VLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI------RHKNIV 774 (1058)
Q Consensus 702 ~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv 774 (1058)
+..+|.+.+.||+|+||+||+| +..+++.||||++... ....+.+.+|+++++.+ .|+||+
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~------------~~~~~~~~~E~~~l~~l~~~~~~~~~~iv 162 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE------------KRFHRQAAEEIRILEHLRKQDKDNTMNVI 162 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC------------HHHHHHHHHHHHHHHHHHTTCTTSCSCBC
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc------------cchHHHHHHHHHHHHHHhhccccCCcCEE
Confidence 3467999999999999999999 6667899999998422 23356778888888877 577999
Q ss_pred ceeeEEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCC
Q 043053 775 RFLGCCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFE 854 (1058)
Q Consensus 775 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~ 854 (1058)
++++++......++||||+. |+|.+++.......+++..+..|+.||++||+|||+. +||||||||+|||++.++.
T Consensus 163 ~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~ 238 (429)
T 3kvw_A 163 HMLENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGR 238 (429)
T ss_dssp CEEEEEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTS
T ss_pred EEEeecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCC
Confidence 99999999999999999996 5999999876666799999999999999999999999 9999999999999999987
Q ss_pred --eeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCC
Q 043053 855 --PYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPT 921 (1058)
Q Consensus 855 --~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 921 (1058)
+||+|||+++..... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 239 ~~vkL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 239 SGIKVIDFGSSCYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CCEEECCCTTCEETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cceEEeecccceecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 999999999765432 23467999999999999999999999999999999999999999754
No 230
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=8.3e-38 Score=358.07 Aligned_cols=244 Identities=17% Similarity=0.201 Sum_probs=187.4
Q ss_pred hhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHH---HHHcccCCCccccee--
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEI---KTLGSIRHKNIVRFL-- 777 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~---~~l~~l~h~niv~~~-- 777 (1058)
++|.+.+.||+|+||+||+|. ..+|+.||||++.... .......+.+.+|+ +.+++++|||||+++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--------~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~ 144 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTE--------RPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLR 144 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC---------CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHC
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeecc--------ccchHHHHHHHHHHHHHHhccccCCHHHHHHHhh
Confidence 578889999999999999995 4679999999985331 12334568899999 555666799999998
Q ss_pred -----eEEEcCCC-----------------ceEEEEecCCCChhhhhhhcC-----CCCCCHHHHHHHHHHHHHHhhccc
Q 043053 778 -----GCCWNRNN-----------------RLLMYDYMPNGSLGSLLHERT-----GNALEWELRYQILLGAAQGLAYLH 830 (1058)
Q Consensus 778 -----~~~~~~~~-----------------~~lv~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~~LH 830 (1058)
+++.+++. .|+||||+ +|+|.+++.... ...+++..++.|+.||++||+|||
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 223 (377)
T 3byv_A 145 FIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH 223 (377)
T ss_dssp BCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 66655432 78999999 679999998632 122345888899999999999999
Q ss_pred ccCCCCeEeCCCCCCcEEEcCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccC-----------CCCccc
Q 043053 831 HDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMM-----------KITEKS 899 (1058)
Q Consensus 831 ~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~ 899 (1058)
+. +|+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++
T Consensus 224 ~~---~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~ 294 (377)
T 3byv_A 224 HY---GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSF 294 (377)
T ss_dssp HT---TEECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHH
T ss_pred hC---CeecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhh
Confidence 99 999999999999999999999999999986432 2335567 999999998887 899999
Q ss_pred chhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 043053 900 DVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKD 979 (1058)
Q Consensus 900 DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~ 979 (1058)
|||||||++|||++|+.||........ ....... ....+. .+.+++..||+.||++|||+.+
T Consensus 295 DvwSlG~il~elltg~~Pf~~~~~~~~-----------~~~~~~~-~~~~~~------~~~~li~~~L~~dp~~Rpt~~e 356 (377)
T 3byv_A 295 DAWALGLVIYWIWCADLPITKDAALGG-----------SEWIFRS-CKNIPQ------PVRALLEGFLRYPKEDRLLPLQ 356 (377)
T ss_dssp HHHHHHHHHHHHHHSSCCC------CC-----------SGGGGSS-CCCCCH------HHHHHHHHHTCSSGGGCCCHHH
T ss_pred hHHHHHHHHHHHHHCCCCCcccccccc-----------hhhhhhh-ccCCCH------HHHHHHHHHcCCCchhCCCHHH
Confidence 999999999999999999975422110 0001111 112222 2334778899999999999999
Q ss_pred HHHH
Q 043053 980 VAAM 983 (1058)
Q Consensus 980 v~~~ 983 (1058)
++++
T Consensus 357 ~l~h 360 (377)
T 3byv_A 357 AMET 360 (377)
T ss_dssp HHTS
T ss_pred HhhC
Confidence 9974
No 231
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.4e-37 Score=374.07 Aligned_cols=253 Identities=24% Similarity=0.370 Sum_probs=198.4
Q ss_pred cceeccccceEEEEEEe---cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcCCC
Q 043053 709 ANVIGKGCSGVVYRADM---DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNRNN 785 (1058)
Q Consensus 709 ~~~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 785 (1058)
.+.||+|+||+||+|.+ ..++.||||++.... ......+++.+|++++++++|||||++++++.. +.
T Consensus 374 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~---------~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~ 443 (635)
T 4fl3_A 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---------NDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ES 443 (635)
T ss_dssp EEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG---------GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SS
T ss_pred CCEeccCCCEEEEEEEEcCCCcceEEEEEEecccc---------CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CC
Confidence 35899999999999944 346789999985432 233446889999999999999999999999964 56
Q ss_pred ceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccccee
Q 043053 786 RLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKL 865 (1058)
Q Consensus 786 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~~~ 865 (1058)
.++||||+++|+|.++++. ...+++..++.|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+++.
T Consensus 444 ~~lv~E~~~~g~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~ 518 (635)
T 4fl3_A 444 WMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKA 518 (635)
T ss_dssp EEEEEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHH
T ss_pred EEEEEEccCCCCHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccc
Confidence 8999999999999999976 46789999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCc-ccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcCccccCC
Q 043053 866 VDDGDF-ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKGIQVLDP 943 (1058)
Q Consensus 866 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1058)
...... ........||+.|+|||++.+..++.++|||||||++|||++ |+.||.... .......+..... .
T Consensus 519 ~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~--~~~~~~~i~~~~~-----~ 591 (635)
T 4fl3_A 519 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK--GSEVTAMLEKGER-----M 591 (635)
T ss_dssp TTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHHHHHHHHTTCC-----C
T ss_pred cccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCCC-----C
Confidence 654321 222334557889999999999999999999999999999998 999997542 2233333332211 1
Q ss_pred CCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhh
Q 043053 944 SLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKH 989 (1058)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~ 989 (1058)
......+ .+ +.+++..||+.||++||+++++++.|+++..
T Consensus 592 ~~p~~~~---~~---l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 592 GCPAGCP---RE---MYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp CCCTTCC---HH---HHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCCCC---HH---HHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 1111222 22 3447788999999999999999999988754
No 232
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=9.5e-38 Score=361.24 Aligned_cols=203 Identities=25% Similarity=0.360 Sum_probs=156.1
Q ss_pred HHhhccc-cceeccccceEEEEEEec---CCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCccccee
Q 043053 702 VLKCLVD-ANVIGKGCSGVVYRADMD---NGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFL 777 (1058)
Q Consensus 702 ~~~~~~~-~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 777 (1058)
+.+.|.+ .++||+|+||+||+|... +++.||||++... .....+.+|+.++++++||||++++
T Consensus 18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~-------------~~~~~~~~E~~~l~~l~hpniv~~~ 84 (405)
T 3rgf_A 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT-------------GISMSACREIALLRELKHPNVISLQ 84 (405)
T ss_dssp HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS-------------SCCHHHHHHHHHHHHCCCTTBCCCC
T ss_pred hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC-------------CCCHHHHHHHHHHHhcCCCCeeeEe
Confidence 3456766 568999999999999654 5789999998422 2235788999999999999999999
Q ss_pred eEEEc--CCCceEEEEecCCCChhhhhhhcC-------CCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEE
Q 043053 778 GCCWN--RNNRLLMYDYMPNGSLGSLLHERT-------GNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNIL 848 (1058)
Q Consensus 778 ~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nil 848 (1058)
+++.. ....|+||||+++ +|.+++.... ...+++..++.|+.||+.||+|||+. +|+||||||+|||
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIl 160 (405)
T 3rgf_A 85 KVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANIL 160 (405)
T ss_dssp EEEEETTTTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred eEEecCCCCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeE
Confidence 99964 5667999999965 8888886321 23589999999999999999999999 9999999999999
Q ss_pred E----cCCCCeeeeccccceeccCCCc-ccccccccCcCCccCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 043053 849 I----GLEFEPYIADFGLAKLVDDGDF-ARSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSYGVVVLEVLTGKQPIDPT 921 (1058)
Q Consensus 849 l----~~~~~~kl~DfGl~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvvl~elltg~~P~~~~ 921 (1058)
+ +.++.+||+|||+++....... .......+||+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 161 l~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 161 VMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp ECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 9 6778999999999987654221 1233456799999999998874 5899999999999999999999999754
No 233
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=3.4e-37 Score=337.27 Aligned_cols=251 Identities=24% Similarity=0.345 Sum_probs=195.1
Q ss_pred hhccccceeccccceEEEEEEe-cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRADM-DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|.+.+.||+|+||.||+|.. .+|+.||||++..... ......+.+.+|++++++++||||+++++++..
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 82 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI--------RSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST 82 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH--------HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccc--------cchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec
Confidence 5789999999999999999954 4799999999854321 122345789999999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
++..++||||+++++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 83 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~ 157 (276)
T 2h6d_A 83 PTDFFMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGL 157 (276)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCG
T ss_pred CCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeeccc
Confidence 99999999999999999999864 5689999999999999999999999 999999999999999999999999999
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcccc
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKI-TEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVL 941 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1058)
+....... ......||+.|+|||++.+..+ +.++||||+|+++|+|++|+.||.... .......+....
T Consensus 158 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~~----- 227 (276)
T 2h6d_A 158 SNMMSDGE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH--VPTLFKKIRGGV----- 227 (276)
T ss_dssp GGCCCC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHCC-----
T ss_pred ccccCCCc---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc--HHHHHHHhhcCc-----
Confidence 98765432 2234568999999999887765 689999999999999999999997532 122222222111
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 942 DPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
.......+. .+..++.+||+.||++|||+++++++-
T Consensus 228 -~~~~~~~~~------~l~~li~~~l~~~p~~Rps~~~~l~h~ 263 (276)
T 2h6d_A 228 -FYIPEYLNR------SVATLLMHMLQVDPLKRATIKDIREHE 263 (276)
T ss_dssp -CCCCTTSCH------HHHHHHHHHTCSSGGGSCCHHHHHHSH
T ss_pred -ccCchhcCH------HHHHHHHHHccCChhhCCCHHHHHhCh
Confidence 111111122 233477889999999999999999853
No 234
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.1e-38 Score=370.23 Aligned_cols=347 Identities=22% Similarity=0.231 Sum_probs=223.8
Q ss_pred ceeecccccccCCCCccccCcCCccEEEeecCCCcCcCCccccccCCcceeecccCccCCCccccccccccchhhhhcCC
Q 043053 220 EELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTN 299 (1058)
Q Consensus 220 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 299 (1058)
+.++.+++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.+.+..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 34555555555 3444332 35666666666666555555566666666666666555555555555555555555555
Q ss_pred cccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCC
Q 043053 300 QISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPP 379 (1058)
Q Consensus 300 ~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 379 (1058)
+++.+ .+..|.++++|++|+|++|++.+..+..|..+++|++|+|++|.+.+..+.
T Consensus 91 ~l~~~------------------------~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 146 (477)
T 2id5_A 91 RLKLI------------------------PLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHR 146 (477)
T ss_dssp CCCSC------------------------CTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTT
T ss_pred cCCcc------------------------CcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChh
Confidence 55544 444455555566666666666555555555566666666666666655566
Q ss_pred CccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCC
Q 043053 380 EIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGL 459 (1058)
Q Consensus 380 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 459 (1058)
.|.++++|+.|+|++|+++++.+..|..+++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+.+|..+....+|
T Consensus 147 ~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L 226 (477)
T 2id5_A 147 AFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNL 226 (477)
T ss_dssp SSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCC
T ss_pred hccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccc
Confidence 66666667777777776666666666666777777777777666666666667777777777766655555555555567
Q ss_pred CeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCcccCCCChhhhhhHHHHHHHhhcc
Q 043053 460 QVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVPMELGQIEALEIALNLSC 539 (1058)
Q Consensus 460 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~l~ls~ 539 (1058)
+.|+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..
T Consensus 227 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~------------------ 288 (477)
T 2id5_A 227 TSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVE------------------ 288 (477)
T ss_dssp SEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEEC------------------
T ss_pred cEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceEC------------------
Confidence 77777777776444456667777777777777777666667777777777777777776432
Q ss_pred CCCCCCCCccccccccccEEecCCCcccCCCC-cccccCcceeEEEecccccccCCCccccccCCCccccCCcccccCCC
Q 043053 540 NGLTGPIPAQISALNKLSILDLSHNKLEGNLN-PLAQLDNLVSLNISYNKFTGYLPDNKLFRQLSPTDLAGNEGLCSSRK 618 (1058)
Q Consensus 540 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~ 618 (1058)
|.+|.++++|+.|||++|+|++.++ .+..+++|+.|++++|+|+|.++..+.+++.....+.++...|..|.
T Consensus 289 -------~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 289 -------PYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp -------TTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred -------HHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCch
Confidence 3345667777888888888777654 45777888888888888888887666666666667778888887664
No 235
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3.9e-37 Score=340.35 Aligned_cols=252 Identities=29% Similarity=0.390 Sum_probs=195.6
Q ss_pred hccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 705 CLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 705 ~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
+|....+||+|+||.||+| +..+++.||||++... .....+.+.+|+.++++++||||+++++++.+.
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-----------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 91 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER-----------DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN 91 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC-----------CC---HHHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC-----------chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeC
Confidence 3455669999999999999 4567899999988422 223457899999999999999999999999999
Q ss_pred CCceEEEEecCCCChhhhhhhcC-CCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcC-CCCeeeeccc
Q 043053 784 NNRLLMYDYMPNGSLGSLLHERT-GNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGL-EFEPYIADFG 861 (1058)
Q Consensus 784 ~~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~-~~~~kl~DfG 861 (1058)
+..++||||+++++|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 92 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg 168 (295)
T 2clq_A 92 GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFG 168 (295)
T ss_dssp TEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTT
T ss_pred CcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecc
Confidence 99999999999999999998643 33567889999999999999999999 9999999999999987 8999999999
Q ss_pred cceeccCCCcccccccccCcCCccCccccccCC--CCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCcc
Q 043053 862 LAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMK--ITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQ 939 (1058)
Q Consensus 862 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 939 (1058)
.++...... .......||+.|+|||++.+.. ++.++||||||+++|||++|+.||...... ....+.....
T Consensus 169 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~--- 241 (295)
T 2clq_A 169 TSKRLAGIN--PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP--QAAMFKVGMF--- 241 (295)
T ss_dssp TCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH--HHHHHHHHHH---
T ss_pred cccccCCCC--CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch--hHHHHhhccc---
Confidence 998765432 2233557999999999987643 788999999999999999999999643221 1111111111
Q ss_pred ccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 940 VLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
...+......+.. +..++.+||+.||++|||+++++++
T Consensus 242 ~~~~~~~~~~~~~------~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 242 KVHPEIPESMSAE------AKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp CCCCCCCTTSCHH------HHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred cccccccccCCHH------HHHHHHHHccCChhhCCCHHHHhcC
Confidence 1122222222222 3347788999999999999999864
No 236
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3.7e-37 Score=349.26 Aligned_cols=267 Identities=19% Similarity=0.288 Sum_probs=206.7
Q ss_pred HhhccccceeccccceEEEEEEecCCcEEEEEecCcccccccC------CCCCcccchHHHHHHHHHHHcccCCCcccce
Q 043053 703 LKCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAAN------GCSDEKSGVRDSFSAEIKTLGSIRHKNIVRF 776 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~------~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 776 (1058)
.++|.+.+.||+|+||.||+|.. +|+.||||++......... ..........+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36899999999999999999977 8999999998654321100 0000011223889999999999999999999
Q ss_pred eeEEEcCCCceEEEEecCCCChhhh------hhhcCCCCCCHHHHHHHHHHHHHHhhcccc-cCCCCeEeCCCCCCcEEE
Q 043053 777 LGCCWNRNNRLLMYDYMPNGSLGSL------LHERTGNALEWELRYQILLGAAQGLAYLHH-DCVPPIVHRDIKANNILI 849 (1058)
Q Consensus 777 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivHrDikp~Nill 849 (1058)
++++.+.+..++||||+++|+|.++ +.......+++..++.++.|++.||+|||+ . +|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEE
Confidence 9999999999999999999999999 665446789999999999999999999999 8 99999999999999
Q ss_pred cCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccC-CCCc-ccchhhHHHHHHHHHhCCCCCCCCCCCChh
Q 043053 850 GLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMM-KITE-KSDVYSYGVVVLEVLTGKQPIDPTIPDGSH 927 (1058)
Q Consensus 850 ~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwSlGvvl~elltg~~P~~~~~~~~~~ 927 (1058)
+.++.+||+|||.+...... ......||+.|+|||+..+. .++. ++||||+|+++|||++|+.||...... ..
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~ 260 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-VE 260 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-HH
T ss_pred cCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-HH
Confidence 99999999999999876543 23456799999999998877 6666 999999999999999999999765332 22
Q ss_pred HHHHHHhhcCccccC-CCCC------------CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 928 VVDWVRQKKGIQVLD-PSLL------------SRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 928 ~~~~~~~~~~~~~~~-~~~~------------~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
....+.......... .... ...+. .+.+++..||+.||++|||++|++++-
T Consensus 261 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~li~~~L~~dP~~Rps~~e~l~hp 324 (348)
T 2pml_X 261 LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSN------EDIDFLKLFLRKNPAERITSEDALKHE 324 (348)
T ss_dssp HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCH------HHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred HHHHHhccCcCCccchhhhhccccccccccchhhcCH------HHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 322222211100000 0000 11111 234578889999999999999999853
No 237
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=7.9e-37 Score=360.44 Aligned_cols=345 Identities=27% Similarity=0.412 Sum_probs=208.9
Q ss_pred CCcccEEecCCCCCCCCCChhhcCcccCCEEeccccCCCCccccccccchhhhHHhhhhccccCCChhhhcccccchhhh
Q 043053 47 CVGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNSNQLTGKIPVELSNCKSLRKLLLFDNALAGNIPAELGRLSNLEEMR 126 (1058)
Q Consensus 47 l~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~ 126 (1058)
+.+|+.|++++|.++ .+|. +..+++|++|+|++|++.+ +|. +.++++|++|++++|.+. .++. ++++++|++|+
T Consensus 45 l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~-~~~-~~~l~~L~~L~l~~n~l~-~~~~-~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIA-DITP-LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEE
T ss_pred hccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCC-chh-hhccccCCEEECCCCccc-cChh-hcCCCCCCEEE
Confidence 455666666666665 4553 5666666666666666653 333 666666666666666665 3333 66666666666
Q ss_pred cCCCccccCCCCccccCCCCCceecccCccccccCCccccCCCccceeeeeccccccccCccccCCCCccEEEccCCcCC
Q 043053 127 AGGNKDIVGKIPAELGDCSNMTALGLADTQVSGSLPASLGKLSKLQTLSIYTTMISGEIPAEIGNCSELVSLFLYENSLS 206 (1058)
Q Consensus 127 l~~~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~ 206 (1058)
+++|. +..++. ++.+++|++|++++|.+.+ ++ .++++++|+.|++.+ .+.+.. .+.++++|+.|++++|.+.
T Consensus 119 L~~n~--l~~~~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~~-~~~~~~--~~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 119 LFNNQ--ITDIDP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFGN-QVTDLK--PLANLTTLERLDISSNKVS 190 (466)
T ss_dssp CCSSC--CCCCGG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEEE-SCCCCG--GGTTCTTCCEEECCSSCCC
T ss_pred CCCCC--CCCChH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecCC-cccCch--hhccCCCCCEEECcCCcCC
Confidence 66654 333433 6666777777777776653 22 467777777777753 333222 2677777777777777766
Q ss_pred CCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCcCCccccccCCcceeecccCccCCCcccccc
Q 043053 207 GSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLA 286 (1058)
Q Consensus 207 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 286 (1058)
+. ..+..+++|++|++++|.+.+..+ ++.+++|++|++++|.+++. ..+..+++|+.|++++|.+.+..+ +.
T Consensus 191 ~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~ 262 (466)
T 1o6v_A 191 DI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LS 262 (466)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GT
T ss_pred CC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hh
Confidence 32 246677777777777777765433 56677777777777777643 346667777777777777765443 66
Q ss_pred ccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhh
Q 043053 287 NATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKL 366 (1058)
Q Consensus 287 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 366 (1058)
.+++|++|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..| +..+++|++|
T Consensus 263 ~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 336 (466)
T 1o6v_A 263 GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRL 336 (466)
T ss_dssp TCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEE
T ss_pred cCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEe
Confidence 66677777777776665433 5555566666666666554433 5556666666666666664433 4455566666
Q ss_pred hccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCC
Q 043053 367 LLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSG 423 (1058)
Q Consensus 367 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 423 (1058)
++++|.+++. ..+.++++|+.|++++|++++..| +..+++|++|++++|.+++
T Consensus 337 ~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 337 FFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp ECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred ECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 6666655543 345555666666666666655544 5555666666666665553
No 238
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=5.5e-37 Score=348.08 Aligned_cols=264 Identities=23% Similarity=0.325 Sum_probs=201.7
Q ss_pred HhhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
..+|.+.+.||+|+||+||+|. ..+|+.||||++.... ........+.+|++++++++||||+++++++.
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 86 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN---------EKEGFPITALREIKILQLLKHENVVNLIEICR 86 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSS---------CSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccc---------ccccchHHHHHHHHHHHhccCCCcccHhheee
Confidence 4789999999999999999994 4689999999885432 22334567889999999999999999999997
Q ss_pred cC--------CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCC
Q 043053 782 NR--------NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEF 853 (1058)
Q Consensus 782 ~~--------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~ 853 (1058)
.. +..++||||+++ +|.+.+... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 87 ~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~ 161 (351)
T 3mi9_A 87 TKASPYNRCKGSIYLVFDFCEH-DLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDG 161 (351)
T ss_dssp EC--------CEEEEEEECCSE-EHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTS
T ss_pred ccccccccCCceEEEEEeccCC-CHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCC
Confidence 64 357999999975 888877654 35689999999999999999999999 999999999999999999
Q ss_pred CeeeeccccceeccCCCc--ccccccccCcCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHH
Q 043053 854 EPYIADFGLAKLVDDGDF--ARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVD 930 (1058)
Q Consensus 854 ~~kl~DfGl~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~ 930 (1058)
.+||+|||+++....... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... .....
T Consensus 162 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~ 239 (351)
T 3mi9_A 162 VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE--QHQLA 239 (351)
T ss_dssp CEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHH
T ss_pred CEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh--HHHHH
Confidence 999999999987653221 223345678999999998876 4579999999999999999999999975421 12222
Q ss_pred HHHhhcCccccCCCCCC----------------CCchhHHHH------HHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 931 WVRQKKGIQVLDPSLLS----------------RPESEIDEM------LQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 931 ~~~~~~~~~~~~~~~~~----------------~~~~~~~~~------~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
.+...... ..+.... ......... ..+.+++.+||+.||++|||++|++++-
T Consensus 240 ~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 313 (351)
T 3mi9_A 240 LISQLCGS--ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 313 (351)
T ss_dssp HHHHHHCC--CCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHHHHhCC--CChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCC
Confidence 22211110 0010000 000001111 1245689999999999999999998853
No 239
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=4.5e-37 Score=356.36 Aligned_cols=258 Identities=26% Similarity=0.367 Sum_probs=190.9
Q ss_pred hhccccceeccccceEEEEEEe-cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRADM-DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
.+|...++||+|+||.||+|.. .+|+.||||++... ...+.+|++++++++|||||++++++..
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~---------------~~~~~~E~~il~~l~hpniv~l~~~~~~ 118 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD---------------KRFKNRELQIMRKLDHCNIVRLRYFFYS 118 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------------TTSCCHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc---------------chhHHHHHHHHHHcCCCCccceeeEEec
Confidence 3688999999999999999955 57999999988422 1122479999999999999999999854
Q ss_pred CC------CceEEEEecCCCChhhhhhh--cCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCC-C
Q 043053 783 RN------NRLLMYDYMPNGSLGSLLHE--RTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLE-F 853 (1058)
Q Consensus 783 ~~------~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~-~ 853 (1058)
.. ..++||||+++ ++.+++.. .....+++..++.++.||++||+|||+. +|+||||||+|||++.+ +
T Consensus 119 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~ 194 (420)
T 1j1b_A 119 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTA 194 (420)
T ss_dssp EETTTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTT
T ss_pred cCCCCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCC
Confidence 21 25789999976 77776653 2356799999999999999999999999 99999999999999965 5
Q ss_pred CeeeeccccceeccCCCcccccccccCcCCccCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHH
Q 043053 854 EPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWV 932 (1058)
Q Consensus 854 ~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~ 932 (1058)
.+||+|||+++...... .....+||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ...+...+
T Consensus 195 ~~kl~DFG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~l~~i~ 270 (420)
T 1j1b_A 195 VLKLCDFGSAKQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII 270 (420)
T ss_dssp EEEECCCTTCEECCTTC---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHH
T ss_pred eEEeccchhhhhcccCC---CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHH
Confidence 68999999998765432 22346789999999998764 789999999999999999999999975421 11222222
Q ss_pred Hhhc------------Ccc-ccCCCCCCCCchhH---HHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 933 RQKK------------GIQ-VLDPSLLSRPESEI---DEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 933 ~~~~------------~~~-~~~~~~~~~~~~~~---~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
.... ... ...+.....+.... .....+.+++.+||+.||++|||+.|++++-
T Consensus 271 ~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp 338 (420)
T 1j1b_A 271 KVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 338 (420)
T ss_dssp HHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCH
Confidence 1100 000 00011110000000 0012345688899999999999999999754
No 240
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.3e-37 Score=375.72 Aligned_cols=252 Identities=21% Similarity=0.271 Sum_probs=203.9
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccceeeEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVRFLGCC 780 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 780 (1058)
.++|.+.++||+|+||.||+| +..+++.||||++.+.... .....+.+..|..++..+ +||+|+++++++
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~--------~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~ 411 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI--------QDDDVECTMVEKRVLALPGKPPFLTQLHSCF 411 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHH--------HTTTTHHHHHHHHHHTCTTCCTTBCCEEEEC
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccc--------cHHHHHHHHHHHHHHHhccCCCeEEEEEEEE
Confidence 467999999999999999999 5567899999998644221 223356788999999988 699999999999
Q ss_pred EcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecc
Q 043053 781 WNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADF 860 (1058)
Q Consensus 781 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~Df 860 (1058)
.+.+..|+||||++||+|.++++.. ..+++..++.++.||+.||+|||+. +||||||||+|||++.++.+||+||
T Consensus 412 ~~~~~~~lV~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DF 486 (674)
T 3pfq_A 412 QTMDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADF 486 (674)
T ss_dssp BCSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCC
T ss_pred EeCCEEEEEEeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeec
Confidence 9999999999999999999999874 5699999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccc
Q 043053 861 GLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQV 940 (1058)
Q Consensus 861 Gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 940 (1058)
|+++...... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+.. ..
T Consensus 487 Gla~~~~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~--~~~~~~~i~~---~~- 558 (674)
T 3pfq_A 487 GMCKENIWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--EDELFQSIME---HN- 558 (674)
T ss_dssp TTCEECCCTT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHS---SC-
T ss_pred ceeeccccCC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC--HHHHHHHHHh---CC-
Confidence 9998643322 23456789999999999999999999999999999999999999997542 2222222211 11
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 043053 941 LDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTM-----KDVAAM 983 (1058)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~-----~~v~~~ 983 (1058)
.......+. .+.+++..||+.||++||++ +||.++
T Consensus 559 --~~~p~~~s~------~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 559 --VAYPKSMSK------EAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp --CCCCTTSCH------HHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred --CCCCccCCH------HHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 111112222 23457788999999999997 666654
No 241
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=347.57 Aligned_cols=260 Identities=22% Similarity=0.351 Sum_probs=196.7
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
++|.+.+.||+|+||.||+|.... .||||++.... ......+.+.+|+.++++++||||+++++++.++
T Consensus 33 ~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~---------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 101 (319)
T 2y4i_B 33 EQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIER---------DNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP 101 (319)
T ss_dssp SCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCS---------CCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS
T ss_pred HHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCC---------CCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence 578999999999999999997653 48999885432 1222345677899999999999999999999999
Q ss_pred CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccccc
Q 043053 784 NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLA 863 (1058)
Q Consensus 784 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~ 863 (1058)
+..++||||+++++|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||+++ ++.+||+|||++
T Consensus 102 ~~~~iv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~ 176 (319)
T 2y4i_B 102 PHLAIITSLCKGRTLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLF 176 (319)
T ss_dssp SCEEEECBCCCSEEHHHHTTSS-CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCC
T ss_pred CceEEEeecccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCc
Confidence 9999999999999999999864 35789999999999999999999999 999999999999998 789999999998
Q ss_pred eeccCCC---cccccccccCcCCccCcccccc---------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHH
Q 043053 864 KLVDDGD---FARSSNTVAGSYGYIAPEYGYM---------MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDW 931 (1058)
Q Consensus 864 ~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~ 931 (1058)
+...... .........||+.|+|||++.+ ..++.++||||||+++|||++|+.||..... ......
T Consensus 177 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~ 254 (319)
T 2y4i_B 177 SISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA--EAIIWQ 254 (319)
T ss_dssp C----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH--HHHHHH
T ss_pred cccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHH
Confidence 7543211 1122334568999999998764 4578899999999999999999999975421 122211
Q ss_pred HHhhcCccccCCCCC-CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043053 932 VRQKKGIQVLDPSLL-SRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHERE 992 (1058)
Q Consensus 932 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~~ 992 (1058)
+.... .+... ...+.. +..++..||+.||++|||++++++.|+++.....
T Consensus 255 ~~~~~-----~~~~~~~~~~~~------l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~ 305 (319)
T 2y4i_B 255 MGTGM-----KPNLSQIGMGKE------ISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305 (319)
T ss_dssp HHTTC-----CCCCCCSSCCTT------HHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred hccCC-----CCCCCcCCCCHH------HHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence 11111 11111 112222 2346778999999999999999999998876543
No 242
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.2e-37 Score=343.67 Aligned_cols=253 Identities=22% Similarity=0.341 Sum_probs=195.6
Q ss_pred HhhccccceeccccceEEEEEEe-cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRADM-DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.++|.+.+.||+|+||.||+|.. .+++.||+|++... .....+.+.+|++++++++||||+++++++.
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~-----------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 86 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK-----------SEEELEDYIVEIEILATCDHPYIVKLLGAYY 86 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC---------------CCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC-----------CHHHHHHHHHHHHHHhcCCCCCEeeeeeeee
Confidence 36899999999999999999954 56899999998532 2234678999999999999999999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccc
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFG 861 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfG 861 (1058)
.++..++||||+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 87 ~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 162 (302)
T 2j7t_A 87 HDGKLWIMIEFCPGGAVDAIMLEL-DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFG 162 (302)
T ss_dssp CC-CEEEEEECCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCH
T ss_pred eCCeEEEEEEeCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECC
Confidence 999999999999999999998764 45689999999999999999999999 99999999999999999999999999
Q ss_pred cceeccCCCcccccccccCcCCccCcccc-----ccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhc
Q 043053 862 LAKLVDDGDFARSSNTVAGSYGYIAPEYG-----YMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKK 936 (1058)
Q Consensus 862 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 936 (1058)
++....... .......||+.|+|||++ .+..++.++||||||+++|+|++|+.||....+ ...........
T Consensus 163 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~ 238 (302)
T 2j7t_A 163 VSAKNLKTL--QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP--MRVLLKIAKSD 238 (302)
T ss_dssp HHHHHHHHH--HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSC
T ss_pred CCccccccc--cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH--HHHHHHHhccC
Confidence 975432211 122345689999999987 366788999999999999999999999975421 11111111111
Q ss_pred CccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 937 GIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
.... ......+. .+..++..||+.||++|||+++++++
T Consensus 239 ~~~~---~~~~~~~~------~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 239 PPTL---LTPSKWSV------EFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp CCCC---SSGGGSCH------HHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred Cccc---CCccccCH------HHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0000 00111111 23447888999999999999999874
No 243
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3.1e-37 Score=350.74 Aligned_cols=259 Identities=24% Similarity=0.321 Sum_probs=182.2
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.++|...+.||+|+||.||+| +..+|+.||||++.... ......+.+.+|+++++.++||||+++++++.
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~---------~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~ 98 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---------QSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 98 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT---------SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc---------cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe
Confidence 378999999999999999999 56789999999985331 23344678889999999999999999999987
Q ss_pred cC------CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCe
Q 043053 782 NR------NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEP 855 (1058)
Q Consensus 782 ~~------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~ 855 (1058)
.. ...|+||||+ +++|.++++. ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+
T Consensus 99 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~ 171 (367)
T 2fst_X 99 PARSLEEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 171 (367)
T ss_dssp SCSSGGGCCCCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred cCCccccCCeEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCE
Confidence 54 5579999999 7899999875 5689999999999999999999999 99999999999999999999
Q ss_pred eeeccccceeccCCCcccccccccCcCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHh
Q 043053 856 YIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQ 934 (1058)
Q Consensus 856 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~ 934 (1058)
||+|||+++..... ....+||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ......+..
T Consensus 172 kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~l~~i~~ 244 (367)
T 2fst_X 172 KILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH--IDQLKLILR 244 (367)
T ss_dssp EECC--------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHH
T ss_pred EEeecccccccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHH
Confidence 99999999865432 335679999999999876 6789999999999999999999999975421 111111111
Q ss_pred hcCcc---ccC-----------CCCCCCCchhHHH-----HHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 935 KKGIQ---VLD-----------PSLLSRPESEIDE-----MLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 935 ~~~~~---~~~-----------~~~~~~~~~~~~~-----~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
..+.. ... ..+...+...... ...+.+++.+||..||++|||++|++++-
T Consensus 245 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp 313 (367)
T 2fst_X 245 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313 (367)
T ss_dssp HHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcCh
Confidence 10000 000 0000000000111 12345688899999999999999998763
No 244
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=7.3e-37 Score=344.05 Aligned_cols=253 Identities=22% Similarity=0.261 Sum_probs=197.4
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC-CCcccceeeEEE
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR-HKNIVRFLGCCW 781 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~ 781 (1058)
++|.+.+.||+|+||+||+| +..+++.||||++... ..+.+.+|++++++++ ||||+++++++.
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--------------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~ 101 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--------------KKKKIKREIKILENLRGGPNIITLADIVK 101 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--------------CHHHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc--------------chHHHHHHHHHHHHcCCCCCEEEeeeeec
Confidence 68999999999999999999 5678999999998422 2477899999999997 999999999998
Q ss_pred c--CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCC-Ceeee
Q 043053 782 N--RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEF-EPYIA 858 (1058)
Q Consensus 782 ~--~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~-~~kl~ 858 (1058)
+ ....++||||+++++|.++++. +++..+..++.|+++||+|||+. +|+||||||+||+++.++ .+||+
T Consensus 102 ~~~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~ 173 (330)
T 3nsz_A 102 DPVSRTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLI 173 (330)
T ss_dssp CTTTCCEEEEEECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEEC
T ss_pred cCCCCceEEEEeccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEE
Confidence 7 5667999999999999999853 78899999999999999999999 999999999999999777 89999
Q ss_pred ccccceeccCCCcccccccccCcCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhc-
Q 043053 859 DFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKK- 936 (1058)
Q Consensus 859 DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~- 936 (1058)
|||+++...... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..................
T Consensus 174 Dfg~a~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~ 250 (330)
T 3nsz_A 174 DWGLAEFYHPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 250 (330)
T ss_dssp CCTTCEECCTTC---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCH
T ss_pred eCCCceEcCCCC---ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCC
Confidence 999998765432 2345578999999999876 67899999999999999999999999654332222211111000
Q ss_pred ---------CccccCC----------------CCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 937 ---------GIQVLDP----------------SLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 937 ---------~~~~~~~----------------~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
.....++ .......... ...+.+++..||++||++|||++|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 251 EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLV--SPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGC--CHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred chhhhHHHHhccccccchhhhhhhccccchhhhccccccccC--CHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000000 0000000001 1234458889999999999999999875
No 245
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=6.9e-37 Score=337.48 Aligned_cols=256 Identities=21% Similarity=0.319 Sum_probs=187.7
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|...+.||+|+||+||+| +..+|+.||||++.... ......+.+.++...++.++||||+++++++.+
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~ 77 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV---------NSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR 77 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC------------CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeeccc---------CcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec
Confidence 68999999999999999999 45689999999985431 122334455566666888999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhh--cCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHE--RTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADF 860 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~Df 860 (1058)
++..++||||+++ +|.+++.. .....+++..++.++.|++.||+|||++ .+|+||||||+||+++.++.+||+||
T Consensus 78 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Df 154 (290)
T 3fme_A 78 EGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDF 154 (290)
T ss_dssp SSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC
T ss_pred cCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeec
Confidence 9999999999975 99888764 2356799999999999999999999985 28999999999999999999999999
Q ss_pred ccceeccCCCcccccccccCcCCccCcccc----ccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhc
Q 043053 861 GLAKLVDDGDFARSSNTVAGSYGYIAPEYG----YMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKK 936 (1058)
Q Consensus 861 Gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 936 (1058)
|+++...... ......||+.|+|||++ .+..++.++||||+|+++|||++|+.||..................
T Consensus 155 g~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 231 (290)
T 3fme_A 155 GISGYLVDDV---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS 231 (290)
T ss_dssp ------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC
T ss_pred CCcccccccc---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCC
Confidence 9998765432 22344699999999995 5667889999999999999999999999754222222222211111
Q ss_pred CccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 043053 937 GIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLK 985 (1058)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~ 985 (1058)
........+. .+.+++..||+.||++|||++|++++-.
T Consensus 232 -----~~~~~~~~~~------~~~~li~~~l~~~p~~Rpt~~e~l~hp~ 269 (290)
T 3fme_A 232 -----PQLPADKFSA------EFVDFTSQCLKKNSKERPTYPELMQHPF 269 (290)
T ss_dssp -----CCCCTTTSCH------HHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred -----CCcccccCCH------HHHHHHHHHhhcChhhCcCHHHHHhCcc
Confidence 0000111222 2345778899999999999999998543
No 246
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.4e-37 Score=346.27 Aligned_cols=256 Identities=21% Similarity=0.285 Sum_probs=185.2
Q ss_pred hhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC-CCcccceeeEEE
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR-HKNIVRFLGCCW 781 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~ 781 (1058)
.+|.+.++||+|+||.||+|. ..+++.||||++... .....+.+.+|+.+++++. ||||+++++++.
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----------~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~ 96 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN-----------EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAAS 96 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES-----------SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC-----------chHHHHHHHHHHHHHHHhccCCChhhcccccc
Confidence 478999999999999999994 567999999988422 2334578899999999996 999999999985
Q ss_pred c--------CCCceEEEEecCCCChhhhhhhc-CCCCCCHHHHHHHHHHHHHHhhcccccCCCC--eEeCCCCCCcEEEc
Q 043053 782 N--------RNNRLLMYDYMPNGSLGSLLHER-TGNALEWELRYQILLGAAQGLAYLHHDCVPP--IVHRDIKANNILIG 850 (1058)
Q Consensus 782 ~--------~~~~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivHrDikp~Nill~ 850 (1058)
. ....++||||+. |+|.+++... ....+++..++.++.|++.||+|||+. + |+||||||+||+++
T Consensus 97 ~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~ 172 (337)
T 3ll6_A 97 IGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLS 172 (337)
T ss_dssp ECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEEC
T ss_pred ccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEEC
Confidence 2 334689999996 6999998752 346799999999999999999999998 7 99999999999999
Q ss_pred CCCCeeeeccccceeccCCCcc----------cccccccCcCCccCcccc---ccCCCCcccchhhHHHHHHHHHhCCCC
Q 043053 851 LEFEPYIADFGLAKLVDDGDFA----------RSSNTVAGSYGYIAPEYG---YMMKITEKSDVYSYGVVVLEVLTGKQP 917 (1058)
Q Consensus 851 ~~~~~kl~DfGl~~~~~~~~~~----------~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlGvvl~elltg~~P 917 (1058)
.++.+||+|||+++........ .......||+.|+|||++ .+..++.++|||||||++|||++|+.|
T Consensus 173 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p 252 (337)
T 3ll6_A 173 NQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP 252 (337)
T ss_dssp TTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCC
T ss_pred CCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCC
Confidence 9999999999999876543211 111245689999999988 566788999999999999999999999
Q ss_pred CCCCCCCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 918 IDPTIPDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
|...... ....... ........+.. +..++..||+.||++|||++|++++|+++...
T Consensus 253 ~~~~~~~-----~~~~~~~-----~~~~~~~~~~~------~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~ 309 (337)
T 3ll6_A 253 FEDGAKL-----RIVNGKY-----SIPPHDTQYTV------FHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA 309 (337)
T ss_dssp C-----------------C-----CCCTTCCSSGG------GHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CcchhHH-----HhhcCcc-----cCCcccccchH------HHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 9643211 1111111 11111111222 23477889999999999999999999988654
No 247
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.1e-37 Score=356.33 Aligned_cols=257 Identities=12% Similarity=0.038 Sum_probs=180.5
Q ss_pred hhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc--CCCccccee---
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI--RHKNIVRFL--- 777 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~--- 777 (1058)
..|...+.||+|+||.||+|. ..+|+.||||++..... ......+.+.+|+.+++.+ +||||++++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~ 133 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAE--------NSRSELERLHEATFAAARLLGESPEEARDRRRL 133 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCST--------THHHHHHHHHHHHHHHHHHHC----------CB
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEeccc--------ccccHHHHHHHHHHHHHHhcccChhhhhhceeE
Confidence 458899999999999999995 55899999999864321 1234456788885544444 699988755
Q ss_pred ----eEEEcCC-----------------CceEEEEecCCCChhhhhhhcCCCCCCHHHH------HHHHHHHHHHhhccc
Q 043053 778 ----GCCWNRN-----------------NRLLMYDYMPNGSLGSLLHERTGNALEWELR------YQILLGAAQGLAYLH 830 (1058)
Q Consensus 778 ----~~~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~~i~~~l~~LH 830 (1058)
+++..+. ..|+||||++ |+|.++++... ..+++..+ ..++.||++||+|||
T Consensus 134 ~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH 211 (371)
T 3q60_A 134 LLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQ 211 (371)
T ss_dssp CCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 4444332 2699999998 79999998642 34466666 788899999999999
Q ss_pred ccCCCCeEeCCCCCCcEEEcCCCCeeeeccccceeccCCCcccccccccCcCCccCcccccc--CCCCcccchhhHHHHH
Q 043053 831 HDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYM--MKITEKSDVYSYGVVV 908 (1058)
Q Consensus 831 ~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvvl 908 (1058)
++ +|+||||||+|||++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++|||||||++
T Consensus 212 ~~---~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il 283 (371)
T 3q60_A 212 SK---GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSI 283 (371)
T ss_dssp HT---TEEETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHH
T ss_pred HC---CCccCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHH
Confidence 99 9999999999999999999999999999876431 114457799999999987 6789999999999999
Q ss_pred HHHHhCCCCCCCCCCCChhHHHHHH-hhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 909 LEVLTGKQPIDPTIPDGSHVVDWVR-QKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 909 ~elltg~~P~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
|||++|+.||....+.......... ................+. .+.+++.+||+.||++|||+++++++-
T Consensus 284 ~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~li~~~L~~dP~~Rpt~~e~l~hp 354 (371)
T 3q60_A 284 YRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPD------FVKTLIGRFLNFDRRRRLLPLEAMETP 354 (371)
T ss_dssp HHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCH------HHHHHHHHHTCSSTTTCCCHHHHTTSH
T ss_pred HHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCH------HHHHHHHHHcCCChhhCCCHHHHhcCH
Confidence 9999999999866432211000000 000000000000111122 234478889999999999999998743
No 248
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3.2e-37 Score=347.12 Aligned_cols=255 Identities=23% Similarity=0.268 Sum_probs=171.6
Q ss_pred HHhhcccc-ceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 702 VLKCLVDA-NVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 702 ~~~~~~~~-~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
+.++|.+. ++||+|+||+||+| +..+|+.||||++... ..........++.+.||||++++++
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---------------~~~~~e~~~~~~~~~h~~i~~~~~~ 90 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---------------PKARQEVDHHWQASGGPHIVCILDV 90 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS---------------HHHHHHHHHHHHHTTSTTBCCEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---------------HHHHHHHHHHHHhcCCCChHHHHHH
Confidence 44678885 57999999999999 5557999999998421 1122223334566789999999999
Q ss_pred EEc----CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCC---
Q 043053 780 CWN----RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLE--- 852 (1058)
Q Consensus 780 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~--- 852 (1058)
+.. ....++||||+++|+|.+++.......+++..++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 91 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~ 167 (336)
T 3fhr_A 91 YENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKD 167 (336)
T ss_dssp EEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTT
T ss_pred HhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCC
Confidence 876 34479999999999999999876566899999999999999999999999 99999999999999864
Q ss_pred CCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHH
Q 043053 853 FEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWV 932 (1058)
Q Consensus 853 ~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~ 932 (1058)
+.+||+|||+++..... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.......... ...
T Consensus 168 ~~~kl~Dfg~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~~ 242 (336)
T 3fhr_A 168 AVLKLTDFGFAKETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP-GMK 242 (336)
T ss_dssp CCEEECCCTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------
T ss_pred ceEEEeccccceecccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh-hHH
Confidence 45999999999866542 2335568999999999988889999999999999999999999997543221100 000
Q ss_pred Hhhc-CccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 043053 933 RQKK-GIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLK 985 (1058)
Q Consensus 933 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~ 985 (1058)
.... .............+. .+.+++..||+.||++|||++|++++-.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~------~~~~li~~~L~~dP~~Rpt~~ell~hp~ 290 (336)
T 3fhr_A 243 RRIRLGQYGFPNPEWSEVSE------DAKQLIRLLLKTDPTERLTITQFMNHPW 290 (336)
T ss_dssp --------CCCTTTSTTCCH------HHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred HhhhccccccCchhhccCCH------HHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 0000 000011111111222 2334778899999999999999998654
No 249
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.6e-36 Score=333.92 Aligned_cols=257 Identities=23% Similarity=0.280 Sum_probs=203.6
Q ss_pred HHHHhhccccceeccccceEEEEEEe-cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceee
Q 043053 700 EQVLKCLVDANVIGKGCSGVVYRADM-DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLG 778 (1058)
Q Consensus 700 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~ 778 (1058)
..+.++|.+.+.||+|+||.||+|.. .+++.||||++.... ......+.+.+|++++++++||||+++++
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~---------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~ 88 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS---------AKNKDTSTILREVELLKKLDHPNIMKLFE 88 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG---------BSSSCHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccc---------cchHHHHHHHHHHHHHHhccCCCccEEEE
Confidence 55678999999999999999999954 579999999985432 12334678999999999999999999999
Q ss_pred EEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCC---CCe
Q 043053 779 CCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLE---FEP 855 (1058)
Q Consensus 779 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~---~~~ 855 (1058)
++.+.+..++||||+++++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.+ +.+
T Consensus 89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~ 163 (287)
T 2wei_A 89 ILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDI 163 (287)
T ss_dssp EEECSSEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCE
T ss_pred EEeCCCeEEEEEEccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccE
Confidence 999999999999999999999998764 4689999999999999999999999 99999999999999764 469
Q ss_pred eeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhh
Q 043053 856 YIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQK 935 (1058)
Q Consensus 856 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 935 (1058)
||+|||++....... ......||+.|+|||++.+. ++.++||||+|+++|+|++|+.||.... .......+...
T Consensus 164 kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~ 237 (287)
T 2wei_A 164 KIIDFGLSTCFQQNT---KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKN--EYDILKRVETG 237 (287)
T ss_dssp EECSTTGGGTBCCCS---SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHC
T ss_pred EEeccCcceeecCCC---ccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCC--HHHHHHHHHcC
Confidence 999999998665432 22344689999999987754 8899999999999999999999997542 22222222221
Q ss_pred cCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 936 KGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
. ...+.......+. .+.+++..||+.||++|||+++++++-
T Consensus 238 ~--~~~~~~~~~~~~~------~~~~li~~~l~~dp~~Rps~~ell~hp 278 (287)
T 2wei_A 238 K--YAFDLPQWRTISD------DAKDLIRKMLTFHPSLRITATQCLEHP 278 (287)
T ss_dssp C--CCCCSGGGTTSCH------HHHHHHHHHTCSSGGGSCCHHHHHHSH
T ss_pred C--CCCCchhhhhcCH------HHHHHHHHHcccChhhCcCHHHHhcCH
Confidence 1 1111111111222 234578889999999999999999853
No 250
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.6e-36 Score=357.85 Aligned_cols=345 Identities=29% Similarity=0.446 Sum_probs=208.9
Q ss_pred cccchhhhcCCCccccCCCCccccCCCCCceecccCccccccCCccccCCCccceeeeeccccccccCccccCCCCccEE
Q 043053 119 LSNLEEMRAGGNKDIVGKIPAELGDCSNMTALGLADTQVSGSLPASLGKLSKLQTLSIYTTMISGEIPAEIGNCSELVSL 198 (1058)
Q Consensus 119 l~~L~~L~l~~~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L 198 (1058)
+.+|+.|++.++. ...+| .+..+++|++|++++|.+.+. +. ++++++|++|++++|.+.+..+ ++++++|++|
T Consensus 45 l~~l~~L~l~~~~--i~~l~-~~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 117 (466)
T 1o6v_A 45 LDQVTTLQADRLG--IKSID-GVEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGL 117 (466)
T ss_dssp HHTCCEEECCSSC--CCCCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred hccccEEecCCCC--CccCc-chhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh--hcCCCCCCEE
Confidence 4555555555554 33444 255566666666666666533 22 6666667777776666664433 6666777777
Q ss_pred EccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCcCCccccccCCcceeecccCccC
Q 043053 199 FLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVS 278 (1058)
Q Consensus 199 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 278 (1058)
++++|.+++. +. +..+++|++|++++|.+.+. ..+..+++|++|+++ |.+.+.. .+..+++|++|++++|.+.
T Consensus 118 ~L~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 118 TLFNNQITDI-DP-LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVS 190 (466)
T ss_dssp ECCSSCCCCC-GG-GTTCTTCSEEEEEEEEECCC--GGGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCC-hH-HcCCCCCCEEECCCCccCCC--hhhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCC
Confidence 7777766643 22 66666777777777666642 236666677777765 3443322 2666666777777776665
Q ss_pred CCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccccccccccccccCccccc
Q 043053 279 GSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLF 358 (1058)
Q Consensus 279 ~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 358 (1058)
+. ..+..+++|++|++++|++.+..+ ++.+++|++|++++|++++. ..+..+++|+.|++++|.+.+..+ +.
T Consensus 191 ~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~ 262 (466)
T 1o6v_A 191 DI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LS 262 (466)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GT
T ss_pred CC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hh
Confidence 43 235666666666666666665543 55566666666666666543 345666666666666666664333 55
Q ss_pred ccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchh
Q 043053 359 QLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMI 438 (1058)
Q Consensus 359 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 438 (1058)
.+++|++|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|++|+|++|++++..| +..+++|+.|
T Consensus 263 ~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 336 (466)
T 1o6v_A 263 GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRL 336 (466)
T ss_dssp TCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEE
T ss_pred cCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEe
Confidence 56666666666666664333 5666666666666666665543 5666666666666666665444 5566666666
Q ss_pred hccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCC
Q 043053 439 DLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSG 495 (1058)
Q Consensus 439 ~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 495 (1058)
++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|++++
T Consensus 337 ~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 337 FFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp ECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred ECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 6666666653 346666666666666666665554 5666666666666666664
No 251
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=9.7e-37 Score=356.50 Aligned_cols=362 Identities=20% Similarity=0.257 Sum_probs=186.8
Q ss_pred ccccccccchhhhHHhhhhccccCCChhhhcccccchhhhcCCCccccCCCCccccCCCCCceecccCccccccCCcccc
Q 043053 87 KIPVELSNCKSLRKLLLFDNALAGNIPAELGRLSNLEEMRAGGNKDIVGKIPAELGDCSNMTALGLADTQVSGSLPASLG 166 (1058)
Q Consensus 87 ~~p~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~~~~~~l~ 166 (1058)
..+..++++++|++|++++|.+. .+| .++++++|++|++++|. +..+| ++.+++|++|++++|++.+. + ++
T Consensus 33 ~~~~~~~~l~~L~~L~Ls~n~l~-~~~-~l~~l~~L~~L~Ls~n~--l~~~~--~~~l~~L~~L~Ls~N~l~~~-~--~~ 103 (457)
T 3bz5_A 33 TDTISEEQLATLTSLDCHNSSIT-DMT-GIEKLTGLTKLICTSNN--ITTLD--LSQNTNLTYLACDSNKLTNL-D--VT 103 (457)
T ss_dssp TSEEEHHHHTTCCEEECCSSCCC-CCT-TGGGCTTCSEEECCSSC--CSCCC--CTTCTTCSEEECCSSCCSCC-C--CT
T ss_pred ccccChhHcCCCCEEEccCCCcc-cCh-hhcccCCCCEEEccCCc--CCeEc--cccCCCCCEEECcCCCCcee-e--cC
Confidence 33444455555555555555554 233 34455555555555544 22332 44445555555555544432 1 44
Q ss_pred CCCccceeeeeccccccccCccccCCCCccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEE
Q 043053 167 KLSKLQTLSIYTTMISGEIPAEIGNCSELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMI 246 (1058)
Q Consensus 167 ~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 246 (1058)
++++|++|++++|.+++ ++ ++.+++|++|++++|.+++. + ++.+++|++|++++|...+.+ .+..+++|++|
T Consensus 104 ~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L 175 (457)
T 3bz5_A 104 PLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTL 175 (457)
T ss_dssp TCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEE
T ss_pred CCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEE
Confidence 44455555555554443 22 44444555555555544431 1 444444555555544332222 24444445555
Q ss_pred EeecCCCcCcCCccccccCCcceeecccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccC
Q 043053 247 DFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLE 326 (1058)
Q Consensus 247 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~ 326 (1058)
++++|++++ +| ++.+++|+.|++++|.+++. .+..+++|++|++++|+++++ | ++.+++|+.|++++|+++
T Consensus 176 ~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p--~~~l~~L~~L~l~~N~l~ 246 (457)
T 3bz5_A 176 DCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D--VTPLTQLTYFDCSVNPLT 246 (457)
T ss_dssp ECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCS
T ss_pred ECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C--ccccCCCCEEEeeCCcCC
Confidence 555554443 22 44444445555544444432 244444444444444444442 2 444444444444444444
Q ss_pred CCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCcccccc
Q 043053 327 GSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIG 406 (1058)
Q Consensus 327 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 406 (1058)
+.. +..+++|+.|++++| +|+.|++++|.+.+.+| ++.+++|+.|++++|.+.+..|.
T Consensus 247 ~~~---~~~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~--- 304 (457)
T 3bz5_A 247 ELD---VSTLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC--- 304 (457)
T ss_dssp CCC---CTTCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---
T ss_pred CcC---HHHCCCCCEEeccCC--------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---
Confidence 332 223333444443333 23344555555544443 34556666666666655444332
Q ss_pred CccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCccccccccccccc
Q 043053 407 GLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKI 486 (1058)
Q Consensus 407 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 486 (1058)
...+|+.|++++| ++|+.|++++|+|++. + ++++++|+.|++++|+|++ ++.|..|
T Consensus 305 ~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L 360 (457)
T 3bz5_A 305 QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKI 360 (457)
T ss_dssp TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGS
T ss_pred CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccc
Confidence 2334444444433 6778888888888874 3 7788888888888888874 2466777
Q ss_pred ccccccCCCCCCCcccCCcccccccccCCcccCCCChhh
Q 043053 487 ILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVPMEL 525 (1058)
Q Consensus 487 ~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~ 525 (1058)
++++|.+.|. ..+..|..+++++|+++|.+|..+
T Consensus 361 ~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~ 394 (457)
T 3bz5_A 361 PALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDL 394 (457)
T ss_dssp SGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTC
T ss_pred cccCCcEEec-----ceeeecCccccccCcEEEEcChhH
Confidence 7888888764 345667778888888888777664
No 252
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.9e-37 Score=352.10 Aligned_cols=275 Identities=20% Similarity=0.204 Sum_probs=194.8
Q ss_pred HHHHhhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 700 EQVLKCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 700 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
..+.++|.+.+.||+|+||.||+|...+|+.||||++...................+.+.+|++++++++||||++++++
T Consensus 18 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 97 (362)
T 3pg1_A 18 HAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDI 97 (362)
T ss_dssp HHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEE
T ss_pred HHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeee
Confidence 44557899999999999999999977779999999986543211100001122334789999999999999999999999
Q ss_pred EEcC-----CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCC
Q 043053 780 CWNR-----NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFE 854 (1058)
Q Consensus 780 ~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~ 854 (1058)
+... ...|+||||++ |+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 98 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~ 172 (362)
T 3pg1_A 98 FVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNND 172 (362)
T ss_dssp EEECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCC
T ss_pred EEeccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCCCC
Confidence 8543 24699999997 5898888754 45789999999999999999999999 9999999999999999999
Q ss_pred eeeeccccceeccCCCcccccccccCcCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHH
Q 043053 855 PYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVR 933 (1058)
Q Consensus 855 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~ 933 (1058)
+||+|||+++..... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...... ........
T Consensus 173 ~kl~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~ 248 (362)
T 3pg1_A 173 ITICDFNLAREDTAD---ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY-NQLNKIVE 248 (362)
T ss_dssp EEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHH
T ss_pred EEEEecCcccccccc---cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH
Confidence 999999999754432 22345678999999998876 67899999999999999999999999754211 11111111
Q ss_pred hhcCc--------------cccCCCCCCCCchhHHH-----HHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 934 QKKGI--------------QVLDPSLLSRPESEIDE-----MLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 934 ~~~~~--------------~~~~~~~~~~~~~~~~~-----~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
..... ..........+...... ...+.+++..||+.||++|||++|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 249 VVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 00000 00000000000000000 1124458889999999999999999875
No 253
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.1e-36 Score=337.41 Aligned_cols=263 Identities=23% Similarity=0.309 Sum_probs=203.5
Q ss_pred HHHhhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC-CCcccceee
Q 043053 701 QVLKCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR-HKNIVRFLG 778 (1058)
Q Consensus 701 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~ 778 (1058)
...++|...+.||+|+||.||+|. ..+|+.||||++........ .........+.+.+|+++++++. ||||+++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~ 91 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSF--SAEEVQELREATLKEVDILRKVSGHPNIIQLKD 91 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTC--CHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEeccccccc--CHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeee
Confidence 445789999999999999999994 45789999999854321000 00011234577889999999996 999999999
Q ss_pred EEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeee
Q 043053 779 CCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIA 858 (1058)
Q Consensus 779 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~ 858 (1058)
++..+...++||||+++|+|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 92 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 166 (298)
T 1phk_A 92 TYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLT 166 (298)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred eeccCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEe
Confidence 999999999999999999999999864 5789999999999999999999999 99999999999999999999999
Q ss_pred ccccceeccCCCcccccccccCcCCccCccccc------cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHH
Q 043053 859 DFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGY------MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWV 932 (1058)
Q Consensus 859 DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~ 932 (1058)
|||++....... ......|++.|+|||++. ...++.++||||+|+++|||++|+.||.... .......+
T Consensus 167 dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~~~ 241 (298)
T 1phk_A 167 DFGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK--QMLMLRMI 241 (298)
T ss_dssp CCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHH
T ss_pred cccchhhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc--HHHHHHHH
Confidence 999998765432 233557899999999875 4567889999999999999999999997532 12222222
Q ss_pred HhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 933 RQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
.... .. .........+ . .+.+++.+||+.||++|||+++++++
T Consensus 242 ~~~~-~~-~~~~~~~~~~---~---~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 242 MSGN-YQ-FGSPEWDDYS---D---TVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp HHTC-CC-CCTTTGGGSC---H---HHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred hcCC-cc-cCcccccccC---H---HHHHHHHHHccCCcccCCCHHHHHhC
Confidence 2111 11 1111011111 1 23457888999999999999999874
No 254
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.6e-36 Score=369.50 Aligned_cols=258 Identities=24% Similarity=0.359 Sum_probs=203.8
Q ss_pred hhccccceeccccceEEEEEEec----CCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 704 KCLVDANVIGKGCSGVVYRADMD----NGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
++|.+.+.||+|+||.||+|... .+..||||++... ......+.+.+|+.++++++||||++++++
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~----------~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~ 459 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC----------TSDSVREKFLQEALTMRQFDHPHIVKLIGV 459 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST----------TCHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc----------CCHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 67899999999999999999553 3567999987432 233456789999999999999999999999
Q ss_pred EEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeec
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIAD 859 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~D 859 (1058)
+. ++..|+||||+++|+|.++++.. ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 460 ~~-~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~D 534 (656)
T 2j0j_A 460 IT-ENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGD 534 (656)
T ss_dssp EC-SSSCEEEEECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC
T ss_pred Ee-cCceEEEEEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEe
Confidence 85 46689999999999999999864 45689999999999999999999999 999999999999999999999999
Q ss_pred cccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHhhcCc
Q 043053 860 FGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVRQKKGI 938 (1058)
Q Consensus 860 fGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 938 (1058)
||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||.... .......+.....
T Consensus 535 FG~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~--~~~~~~~i~~~~~- 610 (656)
T 2j0j_A 535 FGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK--NNDVIGRIENGER- 610 (656)
T ss_dssp CCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--HHHHHHHHHHTCC-
T ss_pred cCCCeecCCCcc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHcCCC-
Confidence 999987654332 22234557889999999998899999999999999999997 999997542 2223332322211
Q ss_pred cccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhh
Q 043053 939 QVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHE 990 (1058)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~ 990 (1058)
+......+. .+.+++..||+.||++|||+.++++.|+.+..+
T Consensus 611 ----~~~~~~~~~------~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 611 ----LPMPPNCPP------TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp ----CCCCTTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCCCccccH------HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 111122222 233478889999999999999999999988654
No 255
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.3e-36 Score=346.44 Aligned_cols=263 Identities=24% Similarity=0.280 Sum_probs=198.6
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
.+|.+.+.||+|+||.||+| +..+++.||||++... ......+.+.+|++++++++||||+++++++..
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 96 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF----------EHQTYCQRTLREIKILLRFRHENIIGINDIIRA 96 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT----------TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECC
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc----------cCcHHHHHHHHHHHHHHhcCCCCCccceeEEec
Confidence 58999999999999999999 5568899999998532 233445788999999999999999999999976
Q ss_pred C-----CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeee
Q 043053 783 R-----NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYI 857 (1058)
Q Consensus 783 ~-----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl 857 (1058)
. ...|+||||+++ +|.++++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 97 ~~~~~~~~~~iv~e~~~~-~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl 169 (364)
T 3qyz_A 97 PTIEQMKDVYIVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKI 169 (364)
T ss_dssp SSTTTCCCEEEEEECCSE-EHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEE
T ss_pred CCccccceEEEEEcccCc-CHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEE
Confidence 4 357999999974 99999975 4589999999999999999999999 9999999999999999999999
Q ss_pred eccccceeccCCCc-ccccccccCcCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhh
Q 043053 858 ADFGLAKLVDDGDF-ARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQK 935 (1058)
Q Consensus 858 ~DfGl~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 935 (1058)
+|||+++....... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .........
T Consensus 170 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~ 248 (364)
T 3qyz_A 170 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGIL 248 (364)
T ss_dssp CCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHH
T ss_pred EeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHh
Confidence 99999987654321 112345679999999998654 458999999999999999999999997543211 111111100
Q ss_pred cCcc----------------ccCCCCCCCCchhH--HHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 936 KGIQ----------------VLDPSLLSRPESEI--DEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 936 ~~~~----------------~~~~~~~~~~~~~~--~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
.... ...+.....+.... .....+.+++.+||+.||++|||++|++++-
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 315 (364)
T 3qyz_A 249 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315 (364)
T ss_dssp CSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred CCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 0000 00000000000000 0011345688899999999999999999753
No 256
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.7e-36 Score=344.54 Aligned_cols=262 Identities=23% Similarity=0.307 Sum_probs=195.5
Q ss_pred HhhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.++|.+.+.||+|+||.||+|. ..+|+.||||++... ........+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 79 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF----------DKPLFALRTLREIKILKHFKHENIITIFNIQR 79 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC----------SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc----------ccchHHHHHHHHHHHHHhCcCCCcCCeeeeec
Confidence 3689999999999999999994 457999999998432 23344677889999999999999999999887
Q ss_pred cC-----CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCee
Q 043053 782 NR-----NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPY 856 (1058)
Q Consensus 782 ~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~k 856 (1058)
.. ...++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 80 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~k 152 (353)
T 2b9h_A 80 PDSFENFNEVYIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLK 152 (353)
T ss_dssp CSCSTTCCCEEEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEE
T ss_pred ccccCccceEEEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEE
Confidence 54 56799999997 599999876 4689999999999999999999999 999999999999999999999
Q ss_pred eeccccceeccCCCcc--------cccccccCcCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChh
Q 043053 857 IADFGLAKLVDDGDFA--------RSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSH 927 (1058)
Q Consensus 857 l~DfGl~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~ 927 (1058)
|+|||+++........ .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ..
T Consensus 153 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~ 230 (353)
T 2b9h_A 153 VCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY--RH 230 (353)
T ss_dssp ECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HH
T ss_pred EEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc--HH
Confidence 9999999876542211 11234578999999998654 6789999999999999999999999975421 11
Q ss_pred HHHHHHhhcCccccCC---------------CCCCCCchhHH-----HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 928 VVDWVRQKKGIQVLDP---------------SLLSRPESEID-----EMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 928 ~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~-----~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
....+.........+. .....+..... ....+.+++.+||+.||++|||++|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp HHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 1111111000000000 00000000000 01123458889999999999999999874
No 257
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.2e-37 Score=352.24 Aligned_cols=256 Identities=23% Similarity=0.326 Sum_probs=192.3
Q ss_pred HHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEE
Q 043053 702 VLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCC 780 (1058)
Q Consensus 702 ~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 780 (1058)
..++|.+.+.||+|+||+||+| +..+|+.||||++.... ....+|+++++.++||||+++++++
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---------------~~~~~E~~il~~l~hpnIv~l~~~~ 69 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP---------------RYKNRELDIMKVLDHVNIIKLVDYF 69 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT---------------TSCCHHHHHHTTCCCTTBCCEEEEE
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc---------------chHHHHHHHHHHcCCCCccchhhee
Confidence 3468999999999999999999 56789999999884221 1123799999999999999999998
Q ss_pred EcC--------------------------------------CCceEEEEecCCCChhhhhhh--cCCCCCCHHHHHHHHH
Q 043053 781 WNR--------------------------------------NNRLLMYDYMPNGSLGSLLHE--RTGNALEWELRYQILL 820 (1058)
Q Consensus 781 ~~~--------------------------------------~~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~ 820 (1058)
... ...++||||+++ +|.+.+.. .....+++..+..++.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~ 148 (383)
T 3eb0_A 70 YTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIY 148 (383)
T ss_dssp EEC-------------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred eecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 543 236899999984 88888764 2357799999999999
Q ss_pred HHHHHhhcccccCCCCeEeCCCCCCcEEEc-CCCCeeeeccccceeccCCCcccccccccCcCCccCccccccC-CCCcc
Q 043053 821 GAAQGLAYLHHDCVPPIVHRDIKANNILIG-LEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMM-KITEK 898 (1058)
Q Consensus 821 ~i~~~l~~LH~~~~~~ivHrDikp~Nill~-~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~ 898 (1058)
|+++||+|||+. +|+||||||+||+++ .++.+||+|||+++...... ......||+.|+|||++.+. .++.+
T Consensus 149 qi~~aL~~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~ 222 (383)
T 3eb0_A 149 QLFRAVGFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPS 222 (383)
T ss_dssp HHHHHHHHHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTH
T ss_pred HHHHHHHHHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcc
Confidence 999999999999 999999999999998 68899999999998765432 23355789999999988765 48999
Q ss_pred cchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcC------------ccc-cCCCCCCC------CchhHHHHHHH
Q 043053 899 SDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKG------------IQV-LDPSLLSR------PESEIDEMLQA 959 (1058)
Q Consensus 899 ~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~------------~~~-~~~~~~~~------~~~~~~~~~~~ 959 (1058)
+||||+||++|||++|+.||..... .......+..... ... .-+..... +.... ..+
T Consensus 223 ~DiwslG~il~ell~g~~pf~~~~~-~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 298 (383)
T 3eb0_A 223 IDLWSIGCVFGELILGKPLFSGETS-IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTP---SLA 298 (383)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCC---HHH
T ss_pred hhhhhHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCC---HHH
Confidence 9999999999999999999975421 1122221111000 000 00000000 00001 124
Q ss_pred HHHHHhccCCCCCCCCCHHHHHHH
Q 043053 960 LGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 960 ~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
.+++.+||+.||++|||+.|++++
T Consensus 299 ~~li~~~L~~dP~~R~t~~e~l~h 322 (383)
T 3eb0_A 299 IDLLEQILRYEPDLRINPYEAMAH 322 (383)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHccCChhhCCCHHHHhcC
Confidence 558888999999999999999874
No 258
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.1e-36 Score=343.87 Aligned_cols=197 Identities=20% Similarity=0.282 Sum_probs=173.4
Q ss_pred hhccccceeccccceEEEEEEe--cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCc------ccc
Q 043053 704 KCLVDANVIGKGCSGVVYRADM--DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKN------IVR 775 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~ 775 (1058)
++|.+.+.||+|+||+||+|.. .+++.||||++.. .....+.+.+|+++++.++|++ |++
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~------------~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~ 81 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN------------VDRYCEAARSEIQVLEHLNTTDPNSTFRCVQ 81 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS------------SHHHHHHHHHHHHHHHHHHHHCTTCTTCBCC
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEec------------CCchhHHHHHHHHHHHHhhhcCCCCceeeEe
Confidence 6899999999999999999954 4789999999842 2234577889999999987654 999
Q ss_pred eeeEEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcC----
Q 043053 776 FLGCCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGL---- 851 (1058)
Q Consensus 776 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~---- 851 (1058)
+++++...+..++||||+ +++|.+++.......+++..+..++.|+++||+|||+. +|+||||||+||+++.
T Consensus 82 ~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 157 (339)
T 1z57_A 82 MLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYT 157 (339)
T ss_dssp EEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEE
T ss_pred eecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccc
Confidence 999999999999999999 88999999876556789999999999999999999999 9999999999999987
Q ss_pred ---------------CCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCC
Q 043053 852 ---------------EFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQ 916 (1058)
Q Consensus 852 ---------------~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~ 916 (1058)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~ 232 (339)
T 1z57_A 158 EAYNPKIKRDERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFT 232 (339)
T ss_dssp EEEC----CEEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred cccCCccccccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCC
Confidence 668999999999865432 234579999999999999999999999999999999999999
Q ss_pred CCCCC
Q 043053 917 PIDPT 921 (1058)
Q Consensus 917 P~~~~ 921 (1058)
||...
T Consensus 233 pf~~~ 237 (339)
T 1z57_A 233 VFPTH 237 (339)
T ss_dssp SCCCS
T ss_pred CCCCC
Confidence 99754
No 259
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.8e-36 Score=336.47 Aligned_cols=254 Identities=23% Similarity=0.371 Sum_probs=191.5
Q ss_pred HHhhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEE
Q 043053 702 VLKCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCC 780 (1058)
Q Consensus 702 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 780 (1058)
+.++|...+.||+|+||.||+|. ..+++.||||++.. .....+.+.+|+.++++++||||+++++++
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 71 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH------------TEEKLSTILSEVMLLASLNHQYVVRYYAAW 71 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE------------EHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec------------cHHHHHHHHHHHHHHHhcCchHHHHHHHHH
Confidence 56789999999999999999995 46899999999842 223457899999999999999999999988
Q ss_pred Ec-------------CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcE
Q 043053 781 WN-------------RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNI 847 (1058)
Q Consensus 781 ~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Ni 847 (1058)
.+ ....++||||+++|+|.++++.. ...+++..++.++.|+++||+|||+. +|+||||||+||
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Ni 147 (303)
T 1zy4_A 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNI 147 (303)
T ss_dssp EECCCCCC------CEEEEEEEEECCCSCBHHHHHHHS-CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGE
T ss_pred HhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhcc-ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhE
Confidence 65 34568999999999999999864 45678899999999999999999999 999999999999
Q ss_pred EEcCCCCeeeeccccceeccCCCc------------ccccccccCcCCccCccccccC-CCCcccchhhHHHHHHHHHhC
Q 043053 848 LIGLEFEPYIADFGLAKLVDDGDF------------ARSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSYGVVVLEVLTG 914 (1058)
Q Consensus 848 ll~~~~~~kl~DfGl~~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvvl~elltg 914 (1058)
+++.++.+||+|||+++....... ........||+.|+|||++.+. .++.++||||+||++|||++
T Consensus 148 l~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~- 226 (303)
T 1zy4_A 148 FIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY- 226 (303)
T ss_dssp EECTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS-
T ss_pred EEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh-
Confidence 999999999999999986543210 1223455689999999998764 68999999999999999998
Q ss_pred CCCCCCCCCCChhHHHHHHhhcCc-cccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 915 KQPIDPTIPDGSHVVDWVRQKKGI-QVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 915 ~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
||... ............. ....+......+. .+..++..||+.||++|||+++++++-
T Consensus 227 --p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~li~~~l~~dp~~Rps~~~ll~h~ 285 (303)
T 1zy4_A 227 --PFSTG----MERVNILKKLRSVSIEFPPDFDDNKMK------VEKKIIRLLIDHDPNKRPGARTLLNSG 285 (303)
T ss_dssp --CCSSH----HHHHHHHHHHHSTTCCCCTTCCTTTSH------HHHHHHHHHTCSSGGGSCCHHHHHHSS
T ss_pred --ccCCc----hhHHHHHHhccccccccCccccccchH------HHHHHHHHHHhcCcccCcCHHHHhCCC
Confidence 55421 1111222221111 1111222111111 223478889999999999999999854
No 260
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.5e-36 Score=346.45 Aligned_cols=201 Identities=24% Similarity=0.278 Sum_probs=172.7
Q ss_pred HHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC-CC-----ccc
Q 043053 702 VLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR-HK-----NIV 774 (1058)
Q Consensus 702 ~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv 774 (1058)
+.++|.+.+.||+|+||+||+| +..+++.||||++.. ......++.+|+.+++.++ |+ +|+
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~------------~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv 119 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN------------KKAFLNQAQIEVRLLELMNKHDTEMKYYIV 119 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECS------------SHHHHHHHHHHHHHHHHHHHCSSGGGGGBC
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEec------------cHHHHHHHHHHHHHHHHHHhcccccceeEE
Confidence 3578999999999999999999 556789999999842 2234567788999988885 55 499
Q ss_pred ceeeEEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEc--CC
Q 043053 775 RFLGCCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIG--LE 852 (1058)
Q Consensus 775 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~--~~ 852 (1058)
++++++...+..++||||++ |+|.+++.......+++..+..++.|++.||+|||.+ ..+||||||||+|||++ .+
T Consensus 120 ~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~ 197 (382)
T 2vx3_A 120 HLKRHFMFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKR 197 (382)
T ss_dssp CEEEEEEETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTS
T ss_pred EeeeeeccCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCC
Confidence 99999999999999999996 5999999876556799999999999999999999952 12999999999999995 47
Q ss_pred CCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCC
Q 043053 853 FEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPT 921 (1058)
Q Consensus 853 ~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 921 (1058)
+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 198 ~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 198 SAIKIVDFGSSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CCEEECCCTTCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CcEEEEeccCceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 78999999999876432 23567999999999999999999999999999999999999999754
No 261
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=8.4e-37 Score=344.98 Aligned_cols=255 Identities=22% Similarity=0.347 Sum_probs=196.8
Q ss_pred hhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHH-HcccCCCcccceeeEEE
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKT-LGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~ 781 (1058)
++|...+.||+|+||.||+|. ..+|+.||||++... .......++..|+.+ ++.++||||+++++++.
T Consensus 51 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~----------~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~ 120 (340)
T 3an0_A 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRAT----------VNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF 120 (340)
T ss_dssp SCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----------CCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEE
T ss_pred hheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccc----------cCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEE
Confidence 568889999999999999995 568999999998543 122234555566655 78889999999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhc--CCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeec
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHER--TGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIAD 859 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~D 859 (1058)
+++..++||||+++ +|.+++... ....+++..++.++.||++||+|||++ .+|+||||||+||+++.++.+||+|
T Consensus 121 ~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~D 197 (340)
T 3an0_A 121 REGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCD 197 (340)
T ss_dssp CSSCEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECC
T ss_pred eCCcEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEee
Confidence 99999999999976 999988752 356899999999999999999999974 2899999999999999999999999
Q ss_pred cccceeccCCCcccccccccCcCCccCccccc----cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhh
Q 043053 860 FGLAKLVDDGDFARSSNTVAGSYGYIAPEYGY----MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQK 935 (1058)
Q Consensus 860 fGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 935 (1058)
||+++..... .......||+.|+|||++. ...++.++|||||||++|||++|+.||.................
T Consensus 198 fg~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 274 (340)
T 3an0_A 198 FGISGYLVDS---VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP 274 (340)
T ss_dssp CSHHHHHSCH---HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSC
T ss_pred CCCceecccc---cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCC
Confidence 9999876432 1223457999999999864 34788999999999999999999999975422211222111111
Q ss_pred cCccccCCCCC-CCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 043053 936 KGIQVLDPSLL-SRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKE 986 (1058)
Q Consensus 936 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~ 986 (1058)
.+... ...+ . .+.+++.+||+.||++|||+.+++++-..
T Consensus 275 ------~~~~~~~~~~---~---~~~~li~~~l~~dp~~Rps~~ell~hp~f 314 (340)
T 3an0_A 275 ------SPQLPADKFS---A---EFVDFTSQCLKKNSKERPTYPELMQHPFF 314 (340)
T ss_dssp ------CCCCCGGGSC---H---HHHHHHHHHTCSSGGGSCCHHHHTTSHHH
T ss_pred ------CCCCCcccCC---H---HHHHHHHHHccCCcccCcCHHHHhcCcCc
Confidence 11110 0111 1 23457888999999999999999985443
No 262
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=9.8e-37 Score=340.18 Aligned_cols=255 Identities=22% Similarity=0.305 Sum_probs=194.6
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC--CCcccceeeEEE
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR--HKNIVRFLGCCW 781 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~ 781 (1058)
++|.+.+.||+|+||.||+|...+++.||||++.... ......+.+.+|++++++++ ||||+++++++.
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~ 98 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE---------ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI 98 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSS---------CCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccc---------ccccchHHHHHHHHHHHhccccCCceEEEEEEee
Confidence 5799999999999999999987889999999985331 23345678999999999997 599999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccc
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFG 861 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfG 861 (1058)
.++..++||| +.+++|.+++... ..+++..++.++.|+++||+|||+. +|+||||||+||+++ ++.+||+|||
T Consensus 99 ~~~~~~lv~e-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-~~~~kL~Dfg 171 (313)
T 3cek_A 99 TDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFG 171 (313)
T ss_dssp CSSEEEEEEC-CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCS
T ss_pred cCCEEEEEEe-cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE-CCeEEEeecc
Confidence 9999999999 5688999999864 5789999999999999999999999 999999999999996 5899999999
Q ss_pred cceeccCCCcccccccccCcCCccCcccccc-----------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHH
Q 043053 862 LAKLVDDGDFARSSNTVAGSYGYIAPEYGYM-----------MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVD 930 (1058)
Q Consensus 862 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~ 930 (1058)
+++...............||+.|+|||++.+ ..++.++||||||+++|||++|+.||............
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 251 (313)
T 3cek_A 172 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 251 (313)
T ss_dssp SSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH
T ss_pred ccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHH
Confidence 9987654332223345679999999998765 46788999999999999999999999754322111111
Q ss_pred HHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 043053 931 WVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLK 985 (1058)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~ 985 (1058)
..... .........+. .+..++.+||+.||++||++++++++..
T Consensus 252 ~~~~~-----~~~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~ell~h~~ 295 (313)
T 3cek_A 252 IIDPN-----HEIEFPDIPEK------DLQDVLKCCLKRDPKQRISIPELLAHPY 295 (313)
T ss_dssp HHCTT-----SCCCCCCCSCH------HHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHhcc-----cccCCcccchH------HHHHHHHHHccCCcccCcCHHHHhcCcc
Confidence 11110 11111112222 2334778899999999999999998643
No 263
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=8.9e-37 Score=352.94 Aligned_cols=200 Identities=23% Similarity=0.294 Sum_probs=172.5
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC--------CCcc
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR--------HKNI 773 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--------h~ni 773 (1058)
.++|.+.+.||+|+||+||+| +..+++.||||++.. .....+.+.+|++++++++ |+||
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~------------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i 103 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS------------AEHYTETALDEIRLLKSVRNSDPNDPNREMV 103 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS------------CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGB
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEec------------CCcchHHHHHHHHHHHHHhhcCCCCCCccee
Confidence 368999999999999999999 566789999999842 2334678899999999996 7889
Q ss_pred cceeeEEE----cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEE
Q 043053 774 VRFLGCCW----NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILI 849 (1058)
Q Consensus 774 v~~~~~~~----~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill 849 (1058)
+++++++. .....++||||+ +|++.+++.......+++..++.++.||++||+|||+++ +|+||||||+|||+
T Consensus 104 v~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll 180 (397)
T 1wak_A 104 VQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILL 180 (397)
T ss_dssp CCEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEE
T ss_pred eeeecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeE
Confidence 99999987 456789999999 667777776654567999999999999999999999853 89999999999999
Q ss_pred cCCC-------------------------------------------------CeeeeccccceeccCCCcccccccccC
Q 043053 850 GLEF-------------------------------------------------EPYIADFGLAKLVDDGDFARSSNTVAG 880 (1058)
Q Consensus 850 ~~~~-------------------------------------------------~~kl~DfGl~~~~~~~~~~~~~~~~~g 880 (1058)
+.++ .+||+|||+++..... .....|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~g 255 (397)
T 1wak_A 181 SVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQ 255 (397)
T ss_dssp CCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCS
T ss_pred eccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCC
Confidence 9775 7999999999876432 234579
Q ss_pred cCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 043053 881 SYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTI 922 (1058)
Q Consensus 881 t~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 922 (1058)
|+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 256 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 297 (397)
T 1wak_A 256 TRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHS 297 (397)
T ss_dssp CGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred CCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 999999999999999999999999999999999999997654
No 264
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.8e-36 Score=346.05 Aligned_cols=259 Identities=24% Similarity=0.302 Sum_probs=194.5
Q ss_pred HhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.++|...+.||+|+||.||+| +..+|+.||||++.... ......+.+.+|+.++++++||||+++++++.
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 111 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF---------QSEIFAKRAYRELLLLKHMQHENVIGLLDVFT 111 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT---------SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc---------cchhHHHHHHHHHHHHHhcCCCCchhhhhhee
Confidence 368999999999999999999 56689999999985331 23345678899999999999999999999998
Q ss_pred cCCCc------eEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCe
Q 043053 782 NRNNR------LLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEP 855 (1058)
Q Consensus 782 ~~~~~------~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~ 855 (1058)
..+.. ++||||++ |+|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 112 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~ 183 (371)
T 4exu_A 112 PASSLRNFYDFYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCEL 183 (371)
T ss_dssp SCSSSTTCCCCEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCE
T ss_pred ccCCcccceeEEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCE
Confidence 76654 99999997 58888874 3489999999999999999999999 99999999999999999999
Q ss_pred eeeccccceeccCCCcccccccccCcCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHh
Q 043053 856 YIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQ 934 (1058)
Q Consensus 856 kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~ 934 (1058)
||+|||+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .........
T Consensus 184 kL~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~ 257 (371)
T 4exu_A 184 KILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKV 257 (371)
T ss_dssp EECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHH
T ss_pred EEEecCcccccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHH
Confidence 99999999865432 235578999999999877 67899999999999999999999999754211 111111110
Q ss_pred hcCc-cccC------------CCCCCCCchhHHH-----HHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 935 KKGI-QVLD------------PSLLSRPESEIDE-----MLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 935 ~~~~-~~~~------------~~~~~~~~~~~~~-----~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
.... .... ......+...... ...+.+++..||+.||++|||++|++++-
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 325 (371)
T 4exu_A 258 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHP 325 (371)
T ss_dssp HCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSG
T ss_pred hCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCc
Confidence 0000 0000 0000000000000 12345588899999999999999998753
No 265
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.8e-36 Score=338.66 Aligned_cols=259 Identities=22% Similarity=0.313 Sum_probs=197.5
Q ss_pred hhccccceeccccceEEEEEEe--cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc---CCCcccceee
Q 043053 704 KCLVDANVIGKGCSGVVYRADM--DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI---RHKNIVRFLG 778 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~~~~ 778 (1058)
++|.+.+.||+|+||.||+|.. .+|+.||||++..... .......+.+|+.+++.+ +||||+++++
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~ 81 (326)
T 1blx_A 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG---------EEGMPLSTIREVAVLRHLETFEHPNVVRLFD 81 (326)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBC---------TTSCBCTHHHHHHHHHHHHHTCCTTBCCEEE
T ss_pred hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcc---------cccCCchhhHHHHHHHhhhccCCCCeEeeee
Confidence 6899999999999999999965 5688999999854321 112234566777777766 8999999999
Q ss_pred EEE-----cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCC
Q 043053 779 CCW-----NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEF 853 (1058)
Q Consensus 779 ~~~-----~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~ 853 (1058)
++. .....++||||++ |+|.+++.......+++..++.++.|+++||+|||+. ||+||||||+||+++.++
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~ 157 (326)
T 1blx_A 82 VCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSG 157 (326)
T ss_dssp EEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTC
T ss_pred eeeecccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCC
Confidence 987 4566799999998 5999999876556799999999999999999999999 999999999999999999
Q ss_pred CeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHH
Q 043053 854 EPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVR 933 (1058)
Q Consensus 854 ~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~ 933 (1058)
.+||+|||+++..... .......||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+.
T Consensus 158 ~~kl~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~i~ 232 (326)
T 1blx_A 158 QIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD--VDQLGKIL 232 (326)
T ss_dssp CEEECSCCSCCCCCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHH
T ss_pred CEEEecCcccccccCC---CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHH
Confidence 9999999999865432 233456789999999999988999999999999999999999999975421 11111111
Q ss_pred hhcCc---cccC---------------CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 934 QKKGI---QVLD---------------PSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 934 ~~~~~---~~~~---------------~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
..... .... ............ .+.+++.+||+.||++|||+.+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 233 DVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDE---LGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp HHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCH---HHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHcCCCCcccCccccccchhhhcccCcchhhhccccCCH---HHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 11000 0000 000000011111 23357888999999999999999864
No 266
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.1e-36 Score=350.25 Aligned_cols=258 Identities=21% Similarity=0.305 Sum_probs=191.0
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcC
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 783 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 783 (1058)
.+|...++||+|+||+||+|....+..||+|++.... ....+|+++++.++||||+++++++...
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~---------------~~~~~E~~il~~l~h~niv~l~~~~~~~ 104 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK---------------RFKNRELQIMRIVKHPNVVDLKAFFYSN 104 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT---------------TSCCHHHHHHHTCCCTTBCCEEEEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc---------------chHHHHHHHHHhCCCCCcceEEEEEEec
Confidence 5799999999999999999987777779999884321 1123799999999999999999999654
Q ss_pred CC------ceEEEEecCCCChhhhhhh--cCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEc-CCCC
Q 043053 784 NN------RLLMYDYMPNGSLGSLLHE--RTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIG-LEFE 854 (1058)
Q Consensus 784 ~~------~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~-~~~~ 854 (1058)
.. .++||||++++ +.+.+.. .....+++..++.++.|+++||+|||+. +|+||||||+|||++ .++.
T Consensus 105 ~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~ 180 (394)
T 4e7w_A 105 GDKKDEVFLNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGV 180 (394)
T ss_dssp SSSSSCEEEEEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTE
T ss_pred CCCCCceEEEEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCc
Confidence 33 68999999874 4443331 2246789999999999999999999999 999999999999999 7899
Q ss_pred eeeeccccceeccCCCcccccccccCcCCccCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHH
Q 043053 855 PYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVR 933 (1058)
Q Consensus 855 ~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~ 933 (1058)
+||+|||+++...... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ...+...++
T Consensus 181 ~kL~DFG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~l~~i~~ 256 (394)
T 4e7w_A 181 LKLIDFGSAKILIAGE---PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG-IDQLVEIIK 256 (394)
T ss_dssp EEECCCTTCEECCTTC---CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHH
T ss_pred EEEeeCCCcccccCCC---CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHH
Confidence 9999999998765432 23356789999999988764 589999999999999999999999975421 112222111
Q ss_pred hhc----------CccccCCCCCCCCchhHH------HHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 934 QKK----------GIQVLDPSLLSRPESEID------EMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 934 ~~~----------~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
... .................. ....+.+++.+||+.||++|||+.|++++-
T Consensus 257 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 323 (394)
T 4e7w_A 257 VLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHP 323 (394)
T ss_dssp HHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred HhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcCh
Confidence 100 000000111100000000 011345688899999999999999999853
No 267
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=359.89 Aligned_cols=301 Identities=22% Similarity=0.208 Sum_probs=158.5
Q ss_pred CccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCcCCccccccCCcceeecc
Q 043053 194 ELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMIS 273 (1058)
Q Consensus 194 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 273 (1058)
+++.|+|++|.+++..+..|.++++|++|+|++|.+.+..|..|.++++|++|+|++|++++..+..|.++++|++|+++
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 112 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDIS 112 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECT
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECC
Confidence 34444444444443333444444444444444444443334444444444444444444443333334444444444444
Q ss_pred cCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccccccccccccccC
Q 043053 274 DNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASV 353 (1058)
Q Consensus 274 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 353 (1058)
+|.+.+..+..|..+++|++|+|++|.+.++.+..|..+++|++|++++|++++..+..|..+++|+.|++++|.+.+..
T Consensus 113 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~ 192 (477)
T 2id5_A 113 ENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIR 192 (477)
T ss_dssp TSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEEC
T ss_pred CCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeC
Confidence 44444444444444444444444444444444444455555555555555555444455556666666666666666555
Q ss_pred cccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCc
Q 043053 354 PAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCT 433 (1058)
Q Consensus 354 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 433 (1058)
+..|..+++|++|++++|.+.+.++..+....+|+.|+|++|+|+++.+..|..+++|++|+|++|.+++..+..|..++
T Consensus 193 ~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 272 (477)
T 2id5_A 193 DYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELL 272 (477)
T ss_dssp TTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCT
T ss_pred hhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccc
Confidence 55555555556666655555544444444445666666666666655545566666666666666666655555566666
Q ss_pred ccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCC
Q 043053 434 ELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFS 494 (1058)
Q Consensus 434 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 494 (1058)
+|+.|+|++|+++++.|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++.
T Consensus 273 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 273 RLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp TCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred cCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCcc
Confidence 6666666666666555556666666666666666665544445555555555555555554
No 268
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=5.8e-36 Score=339.85 Aligned_cols=253 Identities=24% Similarity=0.295 Sum_probs=192.9
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|...+.||+|+||.||+| +..+|+.||||++.... ......+.+.+|+.++++++||||+++++++..
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 94 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF---------QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTP 94 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT---------SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECS
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc---------cchHHHHHHHHHHHHHHhcCCCCcccHhheEec
Confidence 67899999999999999999 55679999999985331 233446788999999999999999999999987
Q ss_pred CCC------ceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCee
Q 043053 783 RNN------RLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPY 856 (1058)
Q Consensus 783 ~~~------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~k 856 (1058)
... .++||||++ |+|.+++.. .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~k 166 (353)
T 3coi_A 95 ASSLRNFYDFYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELK 166 (353)
T ss_dssp CSSGGGCCCCEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEE
T ss_pred ccccccceeEEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEE
Confidence 654 499999997 599888753 489999999999999999999999 999999999999999999999
Q ss_pred eeccccceeccCCCcccccccccCcCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhh
Q 043053 857 IADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQK 935 (1058)
Q Consensus 857 l~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 935 (1058)
|+|||+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ......+...
T Consensus 167 l~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~~~~i~~~ 239 (353)
T 3coi_A 167 ILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY--LDQLTQILKV 239 (353)
T ss_dssp ECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH--HHHHHHHHHH
T ss_pred EeecccccCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHH
Confidence 9999999765432 234578999999998876 6789999999999999999999999975421 1111111110
Q ss_pred cC----------------------ccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 936 KG----------------------IQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 936 ~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
.+ .....+......+.... .+.+++.+||+.||++|||+++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 240 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASP---QAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCH---HHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCH---HHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00 00000111111111112 23457888999999999999999875
No 269
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3.1e-36 Score=343.34 Aligned_cols=267 Identities=20% Similarity=0.250 Sum_probs=187.0
Q ss_pred cHHHHHhhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccce
Q 043053 698 SVEQVLKCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRF 776 (1058)
Q Consensus 698 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 776 (1058)
......++|.+.+.||+|+||.||+|. ..+|+.||||++... ......+.+|++.++.++||||+++
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------------~~~~~~~~~~~~~l~~l~h~niv~~ 84 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD------------PRFRNRELQIMQDLAVLHHPNIVQL 84 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC------------TTCCCHHHHHHHHHHHHCCTTBCCE
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC------------ccccHHHHHHHHHHHhcCCCCcccH
Confidence 345667899999999999999999994 467999999987422 1223466788888999999999999
Q ss_pred eeEEEcCCC-------ceEEEEecCCCChhhhhhh--cCCCCCCHHHHHHHHHHHHHHhhccc--ccCCCCeEeCCCCCC
Q 043053 777 LGCCWNRNN-------RLLMYDYMPNGSLGSLLHE--RTGNALEWELRYQILLGAAQGLAYLH--HDCVPPIVHRDIKAN 845 (1058)
Q Consensus 777 ~~~~~~~~~-------~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH--~~~~~~ivHrDikp~ 845 (1058)
++++..... .++||||+++ +|.+.+.. .....+++..+..++.|++.|++||| +. +|+||||||+
T Consensus 85 ~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~ 160 (360)
T 3e3p_A 85 QSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPH 160 (360)
T ss_dssp EEEEEEECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGG
T ss_pred HHhhhccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHH
Confidence 999976433 6899999986 55554442 23567899999999999999999999 77 9999999999
Q ss_pred cEEEcC-CCCeeeeccccceeccCCCcccccccccCcCCccCccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCC
Q 043053 846 NILIGL-EFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSYGVVVLEVLTGKQPIDPTIP 923 (1058)
Q Consensus 846 Nill~~-~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 923 (1058)
|||++. ++.+||+|||+++...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.....
T Consensus 161 NIll~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~ 237 (360)
T 3e3p_A 161 NVLVNEADGTLKLCDFGSAKKLSPSE---PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS 237 (360)
T ss_dssp GEEEETTTTEEEECCCTTCBCCCTTS---CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HEEEeCCCCcEEEeeCCCceecCCCC---CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh
Confidence 999997 8999999999998765432 23355789999999988654 489999999999999999999999975421
Q ss_pred CChhHHHHHHhhcCc----------cccCCCCCCCCchhH---------HHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 924 DGSHVVDWVRQKKGI----------QVLDPSLLSRPESEI---------DEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 924 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~---------~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
........+..... ............... .....+.+++..||+.||++|||++|++++-
T Consensus 238 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 316 (360)
T 3e3p_A 238 -AGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHP 316 (360)
T ss_dssp -HHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSG
T ss_pred -HHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCc
Confidence 11111111110000 000000000000000 0122345688999999999999999998753
No 270
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=4.9e-36 Score=341.03 Aligned_cols=198 Identities=20% Similarity=0.270 Sum_probs=172.0
Q ss_pred HhhccccceeccccceEEEEEEe-cCC-cEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCc------cc
Q 043053 703 LKCLVDANVIGKGCSGVVYRADM-DNG-EVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKN------IV 774 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~-~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv 774 (1058)
.++|.+.+.||+|+||+||+|.. .++ +.||||++.. .....+.+.+|+.++++++|++ ++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~------------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~ 85 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN------------VGKYREAARLEINVLKKIKEKDKENKFLCV 85 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS------------CHHHHHHHHHHHHHHHHHHHHCTTSCSCBC
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc------------cccchhHHHHHHHHHHHHhhcCCCCceeEE
Confidence 36899999999999999999954 445 7899999842 2234578889999999997765 99
Q ss_pred ceeeEEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEE-----
Q 043053 775 RFLGCCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILI----- 849 (1058)
Q Consensus 775 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill----- 849 (1058)
.+++++...+..++||||+ ++++.+++.......+++..++.++.||+.||+|||+. +|+||||||+|||+
T Consensus 86 ~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~ 161 (355)
T 2eu9_A 86 LMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEF 161 (355)
T ss_dssp CEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCE
T ss_pred EeeeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccc
Confidence 9999999999999999999 66888888776556799999999999999999999999 99999999999999
Q ss_pred --------------cCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCC
Q 043053 850 --------------GLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGK 915 (1058)
Q Consensus 850 --------------~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~ 915 (1058)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 236 (355)
T 2eu9_A 162 ETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGF 236 (355)
T ss_dssp EEEECCC-CCCEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred cccccccccccccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCC
Confidence 56789999999999865432 23457999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 043053 916 QPIDPT 921 (1058)
Q Consensus 916 ~P~~~~ 921 (1058)
.||...
T Consensus 237 ~pf~~~ 242 (355)
T 2eu9_A 237 TLFQTH 242 (355)
T ss_dssp CSCCCS
T ss_pred CCCCCC
Confidence 999754
No 271
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=339.29 Aligned_cols=255 Identities=24% Similarity=0.315 Sum_probs=188.3
Q ss_pred hhccccceeccccceEEEEEE-ecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRAD-MDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
++|...+.||+|+||.||+|. ..+++.||||++... .....+++.+|++++++++||||+++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 79 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT-----------DPQSVKHALREIKIIRRLDHDNIVKVFEILGP 79 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC-----------SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECT
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC-----------ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccc
Confidence 689999999999999999994 456999999988422 23446788999999999999999999998743
Q ss_pred --------------CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEE
Q 043053 783 --------------RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNIL 848 (1058)
Q Consensus 783 --------------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nil 848 (1058)
....++||||++ |+|.+++.. ..+++..++.++.|+++||+|||+. +|+||||||+||+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil 152 (320)
T 2i6l_A 80 SGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLF 152 (320)
T ss_dssp TSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEE
T ss_pred cccccccccccccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEE
Confidence 356789999997 599999964 5689999999999999999999999 9999999999999
Q ss_pred Ec-CCCCeeeeccccceeccCCCc-ccccccccCcCCccCcccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCC
Q 043053 849 IG-LEFEPYIADFGLAKLVDDGDF-ARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDG 925 (1058)
Q Consensus 849 l~-~~~~~kl~DfGl~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 925 (1058)
++ .++.+||+|||+++....... ........+|..|+|||++.+ ..++.++||||||+++|||++|+.||.....
T Consensus 153 ~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-- 230 (320)
T 2i6l_A 153 INTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE-- 230 (320)
T ss_dssp EETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--
T ss_pred EcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH--
Confidence 97 567999999999986643211 122344567999999998765 6789999999999999999999999975421
Q ss_pred hhHHHHHHhhcCcc------------------cc-CC-----CCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 043053 926 SHVVDWVRQKKGIQ------------------VL-DP-----SLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVA 981 (1058)
Q Consensus 926 ~~~~~~~~~~~~~~------------------~~-~~-----~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~ 981 (1058)
......+....... .. .+ ......+ ..+.+++.+||+.||++|||++|++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~li~~~L~~dP~~Rpt~~ell 304 (320)
T 2i6l_A 231 LEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGIS------REAVDFLEQILTFSPMDRLTAEEAL 304 (320)
T ss_dssp HHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCC------HHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred HHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhh------HHHHHHHHHHcCCCccccCCHHHHh
Confidence 11111111100000 00 00 0000111 1244588899999999999999998
Q ss_pred HHH
Q 043053 982 AML 984 (1058)
Q Consensus 982 ~~l 984 (1058)
++-
T Consensus 305 ~hp 307 (320)
T 2i6l_A 305 SHP 307 (320)
T ss_dssp TSH
T ss_pred CCc
Confidence 753
No 272
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=5.9e-36 Score=334.81 Aligned_cols=255 Identities=22% Similarity=0.315 Sum_probs=179.2
Q ss_pred HhhccccceeccccceEEEEEEe-cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 703 LKCLVDANVIGKGCSGVVYRADM-DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+..+..+++.++||||+++++++.
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~ 94 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSG---------NKEENKRILMDLDVVLKSHDCPYIVQCFGTFI 94 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTS---------CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccc---------cchHHHHHHHHHHHHHHhcCCCceeeEEEEEe
Confidence 46899999999999999999954 579999999985331 12223345555666788889999999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccc-cCCCCeEeCCCCCCcEEEcCCCCeeeecc
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHH-DCVPPIVHRDIKANNILIGLEFEPYIADF 860 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivHrDikp~Nill~~~~~~kl~Df 860 (1058)
+++..++||||+ ++.+..+... ....+++..++.++.|+++||+|||+ . +|+||||||+||+++.++.+||+||
T Consensus 95 ~~~~~~lv~e~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~df 169 (318)
T 2dyl_A 95 TNTDVFIAMELM-GTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDF 169 (318)
T ss_dssp CSSEEEEEECCC-SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCC
T ss_pred cCCcEEEEEecc-CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEEC
Confidence 999999999999 5455555443 35678999999999999999999998 5 8999999999999999999999999
Q ss_pred ccceeccCCCcccccccccCcCCccCccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhh
Q 043053 861 GLAKLVDDGDFARSSNTVAGSYGYIAPEYGY-----MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQK 935 (1058)
Q Consensus 861 Gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 935 (1058)
|++....... ......||+.|+|||++. ...++.++||||||+++|||++|+.||....... .........
T Consensus 170 g~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~ 245 (318)
T 2dyl_A 170 GISGRLVDDK---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF-EVLTKVLQE 245 (318)
T ss_dssp TTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH-HHHHHHHHS
T ss_pred CCchhccCCc---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH-HHHHHHhcc
Confidence 9997654432 223456999999999984 5567889999999999999999999997542221 111111111
Q ss_pred cCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 936 KGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
. ....+. ....+. .+..++..||+.||.+|||+++++++-
T Consensus 246 ~--~~~~~~-~~~~~~------~l~~li~~~l~~dp~~Rps~~~ll~h~ 285 (318)
T 2dyl_A 246 E--PPLLPG-HMGFSG------DFQSFVKDCLTKDHRKRPKYNKLLEHS 285 (318)
T ss_dssp C--CCCCCS-SSCCCH------HHHHHHHHHTCSCTTTSCCHHHHTTSH
T ss_pred C--CCCCCc-cCCCCH------HHHHHHHHHccCChhHCcCHHHHhhCH
Confidence 1 100111 011222 233477889999999999999999854
No 273
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=7.3e-36 Score=347.76 Aligned_cols=254 Identities=25% Similarity=0.346 Sum_probs=185.9
Q ss_pred hhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 782 (1058)
+.|...++||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +|||||++++++.+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~--------------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~ 80 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID--------------FCDIALMEIKLLTESDDHPNVIRYYCSETT 80 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG--------------GHHHHHHHHHHHHHHTTSTTBCCEEEEEEC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH--------------HHHHHHHHHHHHHhccCCCCcCeEEEEEec
Confidence 356667899999999998887778999999988422 235678999999886 79999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCC-----CCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCC-----
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNA-----LEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLE----- 852 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~-----l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~----- 852 (1058)
++..|+||||+. |+|.+++....... ..+..++.++.||+.||+|||+. +|+||||||+|||++.+
T Consensus 81 ~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~ 156 (434)
T 2rio_A 81 DRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTA 156 (434)
T ss_dssp SSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHS
T ss_pred CCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCccccc
Confidence 999999999996 59999998643211 12334578999999999999999 99999999999999754
Q ss_pred --------CCeeeeccccceeccCCCcc--cccccccCcCCccCcccccc-------CCCCcccchhhHHHHHHHHHh-C
Q 043053 853 --------FEPYIADFGLAKLVDDGDFA--RSSNTVAGSYGYIAPEYGYM-------MKITEKSDVYSYGVVVLEVLT-G 914 (1058)
Q Consensus 853 --------~~~kl~DfGl~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGvvl~ellt-g 914 (1058)
+.+||+|||+++........ .......||+.|+|||++.+ ..++.++|||||||++|||++ |
T Consensus 157 ~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g 236 (434)
T 2rio_A 157 DQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236 (434)
T ss_dssp CCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTS
T ss_pred ccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCC
Confidence 48999999999877653211 12335679999999999865 568899999999999999999 9
Q ss_pred CCCCCCCCCCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 915 KQPIDPTIPDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 915 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
+.||...... ........... +........ .....+.+++.+||+.||++|||+.+++++-
T Consensus 237 ~~Pf~~~~~~---~~~i~~~~~~~----~~~~~~~~~--~~~~~~~~li~~~L~~dP~~Rps~~eil~hp 297 (434)
T 2rio_A 237 KHPFGDKYSR---ESNIIRGIFSL----DEMKCLHDR--SLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297 (434)
T ss_dssp CCTTCSTTTH---HHHHHHTCCCC----CCCTTCCCH--HHHHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred CCCCCCchhh---HHHHhcCCCCc----ccccccccc--cchHHHHHHHHHHhhCChhhCCCHHHHHhCC
Confidence 9999754221 11222211111 111111111 1122345688999999999999999998754
No 274
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.3e-36 Score=337.92 Aligned_cols=248 Identities=21% Similarity=0.333 Sum_probs=198.1
Q ss_pred HHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC--CCcccceee
Q 043053 702 VLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR--HKNIVRFLG 778 (1058)
Q Consensus 702 ~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~ 778 (1058)
+.++|.+.+.||+|+||.||+| +..+++.||||++........ ......+.+.+|+.++++++ ||||+++++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-----~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~ 115 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-----GELPNGTRVPMEVVLLKKVSSGFSGVIRLLD 115 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCE-----EECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhh-----hhhhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence 3468999999999999999999 566899999999864432110 01112355678999999996 599999999
Q ss_pred EEEcCCCceEEEEecCC-CChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEc-CCCCee
Q 043053 779 CCWNRNNRLLMYDYMPN-GSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIG-LEFEPY 856 (1058)
Q Consensus 779 ~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~-~~~~~k 856 (1058)
++..++..++||||+.+ ++|.+++... ..+++..++.++.|+++||+|||+. +|+||||||+||+++ .++.+|
T Consensus 116 ~~~~~~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~k 190 (320)
T 3a99_A 116 WFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELK 190 (320)
T ss_dssp EEECSSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEE
T ss_pred EEecCCcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEE
Confidence 99999999999999986 8999999863 5789999999999999999999999 999999999999999 788999
Q ss_pred eeccccceeccCCCcccccccccCcCCccCccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhh
Q 043053 857 IADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKI-TEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQK 935 (1058)
Q Consensus 857 l~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 935 (1058)
|+|||+++...... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||... . ......
T Consensus 191 L~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~----~---~~~~~~ 259 (320)
T 3a99_A 191 LIDFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----E---EIIRGQ 259 (320)
T ss_dssp ECCCTTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----H---HHHHCC
T ss_pred EeeCcccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh----h---hhhccc
Confidence 99999998765432 234569999999999887666 67899999999999999999999632 1 111110
Q ss_pred cCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 936 KGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
. ......+. .+.+++.+||+.||++|||+++++++
T Consensus 260 ---~----~~~~~~~~------~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 260 ---V----FFRQRVSS------ECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ---C----CCSSCCCH------HHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ---c----cccccCCH------HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 11112222 23347788999999999999999874
No 275
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.6e-36 Score=335.46 Aligned_cols=252 Identities=19% Similarity=0.288 Sum_probs=189.5
Q ss_pred cHHHHHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc----CCCc
Q 043053 698 SVEQVLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI----RHKN 772 (1058)
Q Consensus 698 ~~~~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l----~h~n 772 (1058)
+.+.+.++|.+.+.||+|+||.||+| +..+++.||||++........ ........+.+|+.++.++ +|||
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-----~~~~~~~~~~~e~~~l~~l~~~~~h~~ 99 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGW-----SPLSDSVTCPLEVALLWKVGAGGGHPG 99 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC-------------CCCCHHHHHHHHHHSSCCCSS
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEeccccccc-----ccchhhHHHHHHHHHHHhhcccCCCCC
Confidence 34556688999999999999999999 456789999999854422110 0112234556788888888 8999
Q ss_pred ccceeeEEEcCCCceEEEEe-cCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEc-
Q 043053 773 IVRFLGCCWNRNNRLLMYDY-MPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIG- 850 (1058)
Q Consensus 773 iv~~~~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~- 850 (1058)
|+++++++...+..++|||| +.+++|.+++... ..+++..++.++.|+++||+|||+. +|+||||||+||+++
T Consensus 100 i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 174 (312)
T 2iwi_A 100 VIRLLDWFETQEGFMLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDL 174 (312)
T ss_dssp BCCEEEEC-----CEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEET
T ss_pred eeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeC
Confidence 99999999999999999999 7899999999874 5689999999999999999999999 999999999999999
Q ss_pred CCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCC-cccchhhHHHHHHHHHhCCCCCCCCCCCChhHH
Q 043053 851 LEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKIT-EKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVV 929 (1058)
Q Consensus 851 ~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~ 929 (1058)
.++.+||+|||+++...... .....||..|+|||++.+..+. .++||||+|+++|||++|+.||... .
T Consensus 175 ~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~----~--- 243 (312)
T 2iwi_A 175 RRGCAKLIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD----Q--- 243 (312)
T ss_dssp TTTEEEECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----H---
T ss_pred CCCeEEEEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh----H---
Confidence 88999999999998765432 2355699999999998776664 5899999999999999999999632 1
Q ss_pred HHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 043053 930 DWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAM 983 (1058)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~ 983 (1058)
...... .......+. .+.+++.+||+.||++|||++|++++
T Consensus 244 ~~~~~~-------~~~~~~~~~------~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 244 EILEAE-------LHFPAHVSP------DCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp HHHHTC-------CCCCTTSCH------HHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred HHhhhc-------cCCcccCCH------HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111 111112222 23347888999999999999999875
No 276
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=4.5e-36 Score=343.89 Aligned_cols=198 Identities=23% Similarity=0.333 Sum_probs=169.8
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC-----------CC
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR-----------HK 771 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~ 771 (1058)
++|.+.+.||+|+||+||+| +..+++.||||++... ....+.+.+|+.++++++ ||
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~ 86 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD------------KVYTEAAEDEIKLLQRVNDADNTKEDSMGAN 86 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC------------HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHT
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC------------ccchhhhhHHHHHHHHhhcccccchhccccc
Confidence 57999999999999999999 4578999999998422 234577889999999886 89
Q ss_pred cccceeeEEEcCC----CceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcE
Q 043053 772 NIVRFLGCCWNRN----NRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNI 847 (1058)
Q Consensus 772 niv~~~~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Ni 847 (1058)
||+++++++...+ ..++||||+ +++|.+++.......+++..+..++.||+.||+|||+++ +|+||||||+||
T Consensus 87 ~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NI 163 (373)
T 1q8y_A 87 HILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENV 163 (373)
T ss_dssp TBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGE
T ss_pred hHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHe
Confidence 9999999998654 678999999 889999998766667999999999999999999999952 899999999999
Q ss_pred EEc------CCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCC
Q 043053 848 LIG------LEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPT 921 (1058)
Q Consensus 848 ll~------~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 921 (1058)
|++ ..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 164 ll~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 238 (373)
T 1q8y_A 164 LMEIVDSPENLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238 (373)
T ss_dssp EEEEEETTTTEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---
T ss_pred EEeccCCCcCcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 995 3447999999999876432 23457899999999999999999999999999999999999999754
No 277
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=8.5e-36 Score=334.78 Aligned_cols=258 Identities=24% Similarity=0.318 Sum_probs=177.0
Q ss_pred hhccccceeccccceEEEEEEe-cCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHH-HHcccCCCcccceeeEEE
Q 043053 704 KCLVDANVIGKGCSGVVYRADM-DNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIK-TLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~ 781 (1058)
++|...+.||+|+||.||+|.. .+|+.||||++... .......++.+|+. +++.++||||+++++++.
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~----------~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~ 91 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRST----------VDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALF 91 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECC----------CCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecc----------cCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEE
Confidence 5788999999999999999954 58999999998532 12223455566665 788889999999999999
Q ss_pred cCCCceEEEEecCCCChhhhhhh---cCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeee
Q 043053 782 NRNNRLLMYDYMPNGSLGSLLHE---RTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIA 858 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~ 858 (1058)
+++..++||||+++ +|.+++.. .....+++..+..++.|+++||+|||+. .+|+||||||+||+++.++.+||+
T Consensus 92 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~ 168 (327)
T 3aln_A 92 REGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLC 168 (327)
T ss_dssp CSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEEC
T ss_pred eCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEc
Confidence 99999999999985 88888763 2256789999999999999999999985 289999999999999999999999
Q ss_pred ccccceeccCCCcccccccccCcCCccCcccc----ccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHh
Q 043053 859 DFGLAKLVDDGDFARSSNTVAGSYGYIAPEYG----YMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQ 934 (1058)
Q Consensus 859 DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~ 934 (1058)
|||+++...... ......||+.|+|||++ .+..++.++||||||+++|||++|+.||....... .....
T Consensus 169 Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~ 241 (327)
T 3aln_A 169 DFGISGQLVDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF----DQLTQ 241 (327)
T ss_dssp CCSSSCC---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------CC
T ss_pred cCCCceeccccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH----HHHHH
Confidence 999998664432 22344699999999998 45678899999999999999999999997532111 11111
Q ss_pred hcCccccCCCCCCCC-chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 043053 935 KKGIQVLDPSLLSRP-ESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKE 986 (1058)
Q Consensus 935 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~ 986 (1058)
.. ....+.+.... ..... .+..++..||+.||++|||+++++++-..
T Consensus 242 ~~--~~~~~~~~~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~ell~hp~~ 289 (327)
T 3aln_A 242 VV--KGDPPQLSNSEEREFSP---SFINFVNLCLTKDESKRPKYKELLKHPFI 289 (327)
T ss_dssp CC--CSCCCCCCCCSSCCCCH---HHHHHHHHHTCSSGGGSCCHHHHTTSHHH
T ss_pred Hh--cCCCCCCCCcccccCCH---HHHHHHHHHhhCChhhCcCHHHHHhChHH
Confidence 11 11111111100 01112 23447888999999999999999885443
No 278
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.3e-36 Score=345.97 Aligned_cols=250 Identities=26% Similarity=0.374 Sum_probs=184.8
Q ss_pred hccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccceeeEEEcC
Q 043053 705 CLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVRFLGCCWNR 783 (1058)
Q Consensus 705 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 783 (1058)
+|...++||+|+||+||.....+|+.||||++.... ...+.+|+++++++ +|||||++++++.+.
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~--------------~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~ 90 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC--------------FSFADREVQLLRESDEHPNVIRYFCTEKDR 90 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT--------------EEECHHHHHHHHHSCCCTTBCCEEEEEEET
T ss_pred EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH--------------HHHHHHHHHHHHhccCCCCcCeEEEEEecC
Confidence 588889999999999776666779999999985331 12346899999999 799999999999999
Q ss_pred CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcC---C--CCeeee
Q 043053 784 NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGL---E--FEPYIA 858 (1058)
Q Consensus 784 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~---~--~~~kl~ 858 (1058)
...|+||||++ |+|.+++.... ....+..++.++.||++||+|||+. +|+||||||+||+++. + ..+||+
T Consensus 91 ~~~~lv~E~~~-g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~ 165 (432)
T 3p23_A 91 QFQYIAIELCA-ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMIS 165 (432)
T ss_dssp TEEEEEEECCS-EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEEC
T ss_pred CEEEEEEECCC-CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEe
Confidence 99999999996 59999998653 3445556678999999999999999 9999999999999953 2 357899
Q ss_pred ccccceeccCCCc-ccccccccCcCCccCccccc---cCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCChhHHHHHH
Q 043053 859 DFGLAKLVDDGDF-ARSSNTVAGSYGYIAPEYGY---MMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPDGSHVVDWVR 933 (1058)
Q Consensus 859 DfGl~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~ 933 (1058)
|||+++....... .......+||+.|+|||++. ...++.++||||+||++|||++ |..||..... .. .....
T Consensus 166 DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~--~~-~~~~~ 242 (432)
T 3p23_A 166 DFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ--RQ-ANILL 242 (432)
T ss_dssp CTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT--HH-HHHHT
T ss_pred cccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH--HH-HHHHh
Confidence 9999987654321 12334567999999999987 4567889999999999999999 9999964321 11 11111
Q ss_pred hhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 043053 934 QKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAML 984 (1058)
Q Consensus 934 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l 984 (1058)
.... ..... +.... -..+.+++.+||+.||++|||+++++++-
T Consensus 243 ~~~~-----~~~~~-~~~~~--~~~~~~li~~~L~~dP~~Rps~~evl~hp 285 (432)
T 3p23_A 243 GACS-----LDCLH-PEKHE--DVIARELIEKMIAMDPQKRPSAKHVLKHP 285 (432)
T ss_dssp TCCC-----CTTSC-TTCHH--HHHHHHHHHHHSCSSGGGSCCHHHHHTST
T ss_pred ccCC-----ccccC-ccccc--cHHHHHHHHHHHhCCHhhCCCHHHHHhCc
Confidence 1111 11111 11111 12244588999999999999999999753
No 279
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=5.5e-36 Score=356.73 Aligned_cols=259 Identities=24% Similarity=0.312 Sum_probs=194.0
Q ss_pred HHHhhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeE
Q 043053 701 QVLKCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGC 779 (1058)
Q Consensus 701 ~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 779 (1058)
....+|.+.+.||+|+||.||+| +..+|+.||||++... ......+.+.+|++++++++||||++++++
T Consensus 11 ~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~----------~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v 80 (676)
T 3qa8_A 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE----------LSPKNRERWCLEIQIMKKLNHPNVVSAREV 80 (676)
T ss_dssp ------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC----------CCHHHHHHHHHHHHHHHHCCBTTBCCEEEC
T ss_pred CCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc----------CCHHHHHHHHHHHHHHHhCCCCCCCceeee
Confidence 44578999999999999999999 5567999999988532 233446789999999999999999999998
Q ss_pred EEc------CCCceEEEEecCCCChhhhhhhcC-CCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCC
Q 043053 780 CWN------RNNRLLMYDYMPNGSLGSLLHERT-GNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLE 852 (1058)
Q Consensus 780 ~~~------~~~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~ 852 (1058)
+.. ++..++||||++||+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 81 ~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~ 157 (676)
T 3qa8_A 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPG 157 (676)
T ss_dssp CTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECC
T ss_pred ecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecC
Confidence 765 667799999999999999998643 33689999999999999999999999 99999999999999977
Q ss_pred CC---eeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHH
Q 043053 853 FE---PYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVV 929 (1058)
Q Consensus 853 ~~---~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~ 929 (1058)
+. +||+|||.+....... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||.... ...
T Consensus 158 g~~~~vKL~DFG~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~~ 230 (676)
T 3qa8_A 158 PQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW----QPV 230 (676)
T ss_dssp SSSCEEEECSCCCCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC----HHH
T ss_pred CCceeEEEccccccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc----chh
Confidence 65 8999999998765432 2345679999999999999999999999999999999999999996431 111
Q ss_pred HHHHhh--------cCcc------ccCCCC--CCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 043053 930 DWVRQK--------KGIQ------VLDPSL--LSRPESEIDEMLQALGVALLCVNASPDERPTMKDVA 981 (1058)
Q Consensus 930 ~~~~~~--------~~~~------~~~~~~--~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~ 981 (1058)
.|.... .... ...... .......... .+.+++..||++||++|||+++++
T Consensus 231 ~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~--~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 231 QWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAG--KLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp HSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHH--HHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhH--HHHHHHHHHccCCHhhCcCHHHHh
Confidence 111000 0000 000000 0111111222 234588899999999999998844
No 280
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.1e-35 Score=340.06 Aligned_cols=335 Identities=20% Similarity=0.235 Sum_probs=223.8
Q ss_pred CCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCcCCccccccCCcceeecccCccCCCccccccccccchhhh
Q 043053 216 LKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQ 295 (1058)
Q Consensus 216 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 295 (1058)
+++++.|++++|.+....+..|..+++|++|+|++|.+++..+..|+.+++|++|++++|.+.+..+..|..+++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 46667777777766644444456666777777777776655555666666666666666666665566666666666666
Q ss_pred hcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCC
Q 043053 296 LDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISG 375 (1058)
Q Consensus 296 L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 375 (1058)
|++|+++.+.+..|..+++ |++|++++|++++..+..+..+++|++|++++|.+++
T Consensus 124 L~~n~l~~l~~~~~~~l~~------------------------L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPK------------------------LTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTT------------------------CCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred CCCCccCcCCHHHhcCCCC------------------------CcEEECCCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 6666666544444444444 4444444444444444444444555555555555443
Q ss_pred CCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCcccccc
Q 043053 376 SIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSS 455 (1058)
Q Consensus 376 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 455 (1058)
. .+..+++|+.|++++|.++++ ...++|++|++++|.+... |.. ..++|+.|++++|.+++. ..+..
T Consensus 180 ~---~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~ 246 (390)
T 3o6n_A 180 V---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLN 246 (390)
T ss_dssp C---CGGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGG
T ss_pred c---ccccccccceeeccccccccc-----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcC
Confidence 2 244456666666666666532 2335677777777777643 222 236777777777777753 46777
Q ss_pred CCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCcccCCCChhhhhhHHHHHHH
Q 043053 456 LSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVPMELGQIEALEIAL 535 (1058)
Q Consensus 456 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~l 535 (1058)
+++|++|++++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|+.|++++|+++ .+|..
T Consensus 247 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~----------- 313 (390)
T 3o6n_A 247 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERN----------- 313 (390)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGG-----------
T ss_pred CCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCcc-----------
Confidence 7888888888888877777778888888888888888874 4556677888999999999887 33333
Q ss_pred hhccCCCCCCCCccccccccccEEecCCCcccCCCCcccccCcceeEEEecccccccCCCccccccCCCccccCCccccc
Q 043053 536 NLSCNGLTGPIPAQISALNKLSILDLSHNKLEGNLNPLAQLDNLVSLNISYNKFTGYLPDNKLFRQLSPTDLAGNEGLCS 615 (1058)
Q Consensus 536 ~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~ 615 (1058)
+..+++|+.|+|++|+++... +..+++|+.|++++|+|++.+. ...+..+....+.+++..|.
T Consensus 314 --------------~~~l~~L~~L~L~~N~i~~~~--~~~~~~L~~L~l~~N~~~~~~~-~~~~~~~~~~~~~~~~~~c~ 376 (390)
T 3o6n_A 314 --------------QPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCNSL-RALFRNVARPAVDDADQHCK 376 (390)
T ss_dssp --------------HHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHHHH-HHHTTTCCTTTBCCCCSCCC
T ss_pred --------------ccccCcCCEEECCCCccceeC--chhhccCCEEEcCCCCccchhH-HHHHHHHHhhcccccCceec
Confidence 345678999999999998763 6778899999999999998543 34677777778888888888
Q ss_pred CC
Q 043053 616 SR 617 (1058)
Q Consensus 616 ~~ 617 (1058)
++
T Consensus 377 ~~ 378 (390)
T 3o6n_A 377 ID 378 (390)
T ss_dssp TT
T ss_pred cc
Confidence 65
No 281
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=3.4e-35 Score=322.03 Aligned_cols=236 Identities=12% Similarity=0.088 Sum_probs=180.9
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEc
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWN 782 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 782 (1058)
.+|.+.+.||+|+||.||+| +..+++.||||++.... .......+.+.+|+..+++++||||+++++++.+
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--------~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~ 102 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQG--------VLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT 102 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTC--------CSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECccc--------ccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE
Confidence 67999999999999999999 44569999999986432 1223456889999999999999999999999999
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccc
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGL 862 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl 862 (1058)
++..|+||||++|++|.++++. . .....+.+|+.|+++||+|||+. ||+||||||+||+++.++.+||+++|
T Consensus 103 ~~~~~lv~e~~~g~~L~~~l~~---~-~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~- 174 (286)
T 3uqc_A 103 RAGGLVVAEWIRGGSLQEVADT---S-PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA- 174 (286)
T ss_dssp TTEEEEEEECCCEEEHHHHHTT---C-CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-
T ss_pred CCcEEEEEEecCCCCHHHHHhc---C-CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-
Confidence 9999999999999999999964 2 35556889999999999999999 99999999999999999999998543
Q ss_pred ceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccccC
Q 043053 863 AKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVLD 942 (1058)
Q Consensus 863 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1058)
|++| ++.++|||||||++|||++|+.||........... ...........
T Consensus 175 ---------------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~--~~~~~~~~~~~ 224 (286)
T 3uqc_A 175 ---------------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP--AERDTAGQPIE 224 (286)
T ss_dssp ---------------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE--CCBCTTSCBCC
T ss_pred ---------------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH--HHHHhccCCCC
Confidence 3333 67899999999999999999999986533210000 00000000000
Q ss_pred -CCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043053 943 -PSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDVAAMLKEIKHERE 992 (1058)
Q Consensus 943 -~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~~~~~~~ 992 (1058)
.......+. .+..++.+||+.||++| |++|+++.|+++.....
T Consensus 225 ~~~~~~~~~~------~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 225 PADIDRDIPF------QISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp HHHHCTTSCH------HHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred hhhcccCCCH------HHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 001111122 23447888999999999 99999999998876543
No 282
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.5e-34 Score=356.30 Aligned_cols=240 Identities=21% Similarity=0.255 Sum_probs=190.7
Q ss_pred hhccccceeccccceEEEEEEec--CCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 704 KCLVDANVIGKGCSGVVYRADMD--NGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
++|.+.+.||+|+||.||+|... +|+.||||++... ......+.+.+|++++++++||||+++++++.
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~----------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 149 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS----------GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVE 149 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS----------CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc----------CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEe
Confidence 68999999999999999999553 6899999988532 23344678899999999999999999999998
Q ss_pred cCCC-----ceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCee
Q 043053 782 NRNN-----RLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPY 856 (1058)
Q Consensus 782 ~~~~-----~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~k 856 (1058)
..+. .|+||||++|++|.+++.. .+++..++.|+.||++||+|||+. +||||||||+|||++.+ .+|
T Consensus 150 ~~~~~~~~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~k 221 (681)
T 2pzi_A 150 HTDRHGDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLK 221 (681)
T ss_dssp EECTTSCEEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEE
T ss_pred ecCCCCCceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEE
Confidence 7665 6999999999999998753 689999999999999999999999 99999999999999875 999
Q ss_pred eeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhc
Q 043053 857 IADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKK 936 (1058)
Q Consensus 857 l~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 936 (1058)
|+|||+++..... ....||+.|+|||++.+.. +.++|||||||++|+|++|..||.......
T Consensus 222 l~DFG~a~~~~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~----------- 283 (681)
T 2pzi_A 222 LIDLGAVSRINSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG----------- 283 (681)
T ss_dssp ECCCTTCEETTCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS-----------
T ss_pred EEecccchhcccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc-----------
Confidence 9999999876542 3557999999999987654 889999999999999999998886421110
Q ss_pred CccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHHHHhhh
Q 043053 937 GIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPT-MKDVAAMLKEIK 988 (1058)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt-~~~v~~~l~~~~ 988 (1058)
... ..........+..++.+||++||++||+ ++++.+.+..+.
T Consensus 284 --------~~~-~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 284 --------LPE-DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp --------CCT-TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred --------ccc-cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 000 0111111123445888999999999995 555666665544
No 283
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=8.1e-35 Score=336.61 Aligned_cols=244 Identities=18% Similarity=0.202 Sum_probs=179.4
Q ss_pred hhccccceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCC-Ccccce-----
Q 043053 704 KCLVDANVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRH-KNIVRF----- 776 (1058)
Q Consensus 704 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~----- 776 (1058)
+.|...++||+|+||+||+| +..+|+.||||++.... .......+.+.+|+.+++.++| ++....
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~--------~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~ 149 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTE--------RPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLR 149 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSC--------C----CCHHHHHHHHGGGGSTTCCSHHHHHHHTC
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCC--------CccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcc
Confidence 45778899999999999999 56789999999885331 1222346789999999999987 321111
Q ss_pred ----e------------eEEEc-----CCCceEEEEecCCCChhhhhh-----hcCCCCCCHHHHHHHHHHHHHHhhccc
Q 043053 777 ----L------------GCCWN-----RNNRLLMYDYMPNGSLGSLLH-----ERTGNALEWELRYQILLGAAQGLAYLH 830 (1058)
Q Consensus 777 ----~------------~~~~~-----~~~~~lv~e~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~~i~~~l~~LH 830 (1058)
. .++.. ...++++|+++ +|+|.++++ ......+++..++.++.|+++||+|||
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 228 (413)
T 3dzo_A 150 FIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH 228 (413)
T ss_dssp BCCCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1 11111 12346777766 679999985 222456788999999999999999999
Q ss_pred ccCCCCeEeCCCCCCcEEEcCCCCeeeeccccceeccCCCcccccccccCcCCccCcccc----------ccCCCCcccc
Q 043053 831 HDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYG----------YMMKITEKSD 900 (1058)
Q Consensus 831 ~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~D 900 (1058)
+. +||||||||+|||++.++.+||+|||+++..... ....+| +.|+|||++ .+..++.++|
T Consensus 229 ~~---~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~D 299 (413)
T 3dzo_A 229 HY---GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFD 299 (413)
T ss_dssp HT---TEECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHH
T ss_pred hC---CcccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhh
Confidence 99 9999999999999999999999999998865432 345567 999999998 5556888999
Q ss_pred hhhHHHHHHHHHhCCCCCCCCCCCChhHHHHHHhhcCccccCCCCCCCCchhHHHHHHHHHHHHhccCCCCCCCCCHHHH
Q 043053 901 VYSYGVVVLEVLTGKQPIDPTIPDGSHVVDWVRQKKGIQVLDPSLLSRPESEIDEMLQALGVALLCVNASPDERPTMKDV 980 (1058)
Q Consensus 901 vwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~RPt~~~v 980 (1058)
||||||++|||++|+.||........ ....-... ...+. .+.+++..||+.||++||++.++
T Consensus 300 vwSlGvil~elltg~~Pf~~~~~~~~-----------~~~~~~~~-~~~~~------~~~~li~~~l~~dP~~Rpt~~~~ 361 (413)
T 3dzo_A 300 TWTLGLAIYWIWCADLPNTDDAALGG-----------SEWIFRSC-KNIPQ------PVRALLEGFLRYPKEDRLLPLQA 361 (413)
T ss_dssp HHHHHHHHHHHHHSSCCCCTTGGGSC-----------SGGGGSSC-CCCCH------HHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCcchhhh-----------HHHHHhhc-ccCCH------HHHHHHHHHccCChhhCcCHHHH
Confidence 99999999999999999975422110 00000000 11222 23457788999999999999999
Q ss_pred HHH
Q 043053 981 AAM 983 (1058)
Q Consensus 981 ~~~ 983 (1058)
+++
T Consensus 362 l~~ 364 (413)
T 3dzo_A 362 MET 364 (413)
T ss_dssp TTS
T ss_pred HhC
Confidence 875
No 284
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=6.6e-35 Score=354.57 Aligned_cols=335 Identities=21% Similarity=0.238 Sum_probs=228.4
Q ss_pred CCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCcCCccccccCCcceeecccCccCCCccccccccccchhhh
Q 043053 216 LKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQ 295 (1058)
Q Consensus 216 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 295 (1058)
+.+++.|++++|.+....+..|..+++|++|+|++|.+++..+..|+.+++|++|+|++|.+.+..+..|+.+++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 45667777777777655555566677777777777777766666667777777777777777666666666666666666
Q ss_pred hcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCC
Q 043053 296 LDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISG 375 (1058)
Q Consensus 296 L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 375 (1058)
|++|.|+++.+..|+.+++|++|++++|.+++..|..|..+++|+.|++++|.+ ++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l------------------------~~ 185 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRL------------------------TH 185 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCC------------------------SB
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCC------------------------CC
Confidence 666666655444455555555555555555544444455555555555555444 43
Q ss_pred CCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCcccccc
Q 043053 376 SIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSS 455 (1058)
Q Consensus 376 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 455 (1058)
. .+..+++|+.|++++|.++++ ...++|+.|++++|.+....+.. .++|+.|+|++|.+++ +..+..
T Consensus 186 ~---~~~~l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~ 252 (597)
T 3oja_B 186 V---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLN 252 (597)
T ss_dssp C---CGGGCTTCSEEECCSSCCSEE-----ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGG
T ss_pred c---ChhhhhhhhhhhcccCccccc-----cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--Chhhcc
Confidence 2 134455666666666666532 33456777777777766433222 2567777777777775 356777
Q ss_pred CCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCcccCCCChhhhhhHHHHHHH
Q 043053 456 LSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVPMELGQIEALEIAL 535 (1058)
Q Consensus 456 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~l 535 (1058)
+++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|+++ .+|.
T Consensus 253 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~------------ 318 (597)
T 3oja_B 253 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVER------------ 318 (597)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGG------------
T ss_pred CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCc------------
Confidence 8888888888888877777778888888888888888875 4666677888999999999887 3443
Q ss_pred hhccCCCCCCCCccccccccccEEecCCCcccCCCCcccccCcceeEEEecccccccCCCccccccCCCccccCCccccc
Q 043053 536 NLSCNGLTGPIPAQISALNKLSILDLSHNKLEGNLNPLAQLDNLVSLNISYNKFTGYLPDNKLFRQLSPTDLAGNEGLCS 615 (1058)
Q Consensus 536 ~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~ 615 (1058)
.+..+++|+.|+|++|++++.+ +..+++|+.|++++|+|+|.+. ...+..+....+.+++..|+
T Consensus 319 -------------~~~~l~~L~~L~L~~N~l~~~~--~~~~~~L~~L~l~~N~~~~~~~-~~~~~~~~~~~~~~~~~~C~ 382 (597)
T 3oja_B 319 -------------NQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCNSL-RALFRNVARPAVDDADQHCK 382 (597)
T ss_dssp -------------GHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHHHH-HHHTTTCCTTTBCCCCCCCC
T ss_pred -------------ccccCCCCCEEECCCCCCCCcC--hhhcCCCCEEEeeCCCCCChhH-HHHHHHHhhhccccccccCC
Confidence 3456778999999999998763 6778899999999999998753 34677777888889999998
Q ss_pred CC
Q 043053 616 SR 617 (1058)
Q Consensus 616 ~~ 617 (1058)
.+
T Consensus 383 ~~ 384 (597)
T 3oja_B 383 ID 384 (597)
T ss_dssp TT
T ss_pred cc
Confidence 74
No 285
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.7e-34 Score=319.69 Aligned_cols=236 Identities=21% Similarity=0.264 Sum_probs=179.5
Q ss_pred HHHhhcccc-ceeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHH-cccCCCccccee
Q 043053 701 QVLKCLVDA-NVIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTL-GSIRHKNIVRFL 777 (1058)
Q Consensus 701 ~~~~~~~~~-~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~ 777 (1058)
.+.++|.+. +.||+|+||.||+| +..+++.||||++.. ...+.+|+.++ +..+||||++++
T Consensus 14 ~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----------------~~~~~~e~~~~~~~~~h~~i~~~~ 77 (299)
T 3m2w_A 14 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----------------CPKARREVELHWRASQCPHIVRIV 77 (299)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----------------SHHHHHHHHHHHHHTTSTTBCCEE
T ss_pred ccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc----------------cHHHHHHHHHHHHhccCCCchhHH
Confidence 455677776 78999999999999 557899999999831 24567888888 555899999999
Q ss_pred eEEEc----CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcC--
Q 043053 778 GCCWN----RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGL-- 851 (1058)
Q Consensus 778 ~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~-- 851 (1058)
+++.. ....++||||+++|+|.+++.......+++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 78 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 154 (299)
T 3m2w_A 78 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKR 154 (299)
T ss_dssp EEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSS
T ss_pred hhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCC
Confidence 99876 56689999999999999999886566799999999999999999999999 9999999999999998
Q ss_pred -CCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCChhHHH
Q 043053 852 -EFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGSHVVD 930 (1058)
Q Consensus 852 -~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~ 930 (1058)
++.+||+|||++..... ..++.++||||+||++|||++|+.||....... .
T Consensus 155 ~~~~~kl~Dfg~a~~~~~------------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~--~-- 206 (299)
T 3m2w_A 155 PNAILKLTDFGFAKETTG------------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA--I-- 206 (299)
T ss_dssp TTCCEEECCCTTCEECTT------------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC----------
T ss_pred CCCcEEEecccccccccc------------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh--h--
Confidence 78899999999875432 235678999999999999999999997542211 0
Q ss_pred HHHhhcCccccCCCCCCCCchhH-HHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHh
Q 043053 931 WVRQKKGIQVLDPSLLSRPESEI-DEMLQALGVALLCVNASPDERPTMKDVAAMLKE 986 (1058)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~cl~~dP~~RPt~~~v~~~l~~ 986 (1058)
. ... ...........+.... .....+.+++..||+.||++|||++|++++...
T Consensus 207 -~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~ 260 (299)
T 3m2w_A 207 -S-PGM-KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 260 (299)
T ss_dssp ---CCS-CCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred -h-HHH-HHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhh
Confidence 0 000 0000000011110000 001123457888999999999999999986543
No 286
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4.7e-34 Score=328.88 Aligned_cols=310 Identities=19% Similarity=0.179 Sum_probs=221.8
Q ss_pred CCccceeeeeccccccccCccccCCCCccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEE
Q 043053 168 LSKLQTLSIYTTMISGEIPAEIGNCSELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMID 247 (1058)
Q Consensus 168 l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 247 (1058)
+.+|+.|++.+|.+....+..+..+++|++|+|++|.+++..+..|..+++|++|+|++|.+.+..+..|..+++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 56777777777777643334456777777777777777755556677777777777777777766666677777777777
Q ss_pred eecCCCcCcCCccccccCCcceeecccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCC
Q 043053 248 FSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEG 327 (1058)
Q Consensus 248 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~ 327 (1058)
|++|.++...+..|+++++|++|++++|.+.+..+..|..+++|++|++++|++++.
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~----------------------- 180 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV----------------------- 180 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC-----------------------
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc-----------------------
Confidence 777777654444456677777777777776665566666666666666666666543
Q ss_pred CCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccC
Q 043053 328 SIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGG 407 (1058)
Q Consensus 328 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 407 (1058)
.+..+++|+.|++++|.+.+ +...++|++|++++|.+... |.. ..++|+.|++++|.+++. ..+..
T Consensus 181 ----~~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~ 246 (390)
T 3o6n_A 181 ----DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLN 246 (390)
T ss_dssp ----CGGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGG
T ss_pred ----ccccccccceeecccccccc-----cCCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcC
Confidence 13344556666666666553 12234566667777766643 222 236788888888888764 56788
Q ss_pred ccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccc
Q 043053 408 LKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKII 487 (1058)
Q Consensus 408 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 487 (1058)
+++|++|+|++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+..+++|+.|+
T Consensus 247 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~ 324 (390)
T 3o6n_A 247 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 324 (390)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEE
Confidence 8888888888888887778888888888888888888885 5666778888999999999887 5677788888999999
Q ss_pred cccccCCCCCCCcccCCcccccccccCCcccC
Q 043053 488 LSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTG 519 (1058)
Q Consensus 488 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 519 (1058)
|++|+|+... +..+++|+.|++++|++.+
T Consensus 325 L~~N~i~~~~---~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 325 LDHNSIVTLK---LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp CCSSCCCCCC---CCTTCCCSEEECCSSCEEH
T ss_pred CCCCccceeC---chhhccCCEEEcCCCCccc
Confidence 9999987542 6678899999999999874
No 287
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.7e-33 Score=318.96 Aligned_cols=308 Identities=24% Similarity=0.422 Sum_probs=206.8
Q ss_pred cccCCCccceeeeeccccccccCccccCCCCccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCc
Q 043053 164 SLGKLSKLQTLSIYTTMISGEIPAEIGNCSELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSL 243 (1058)
Q Consensus 164 ~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 243 (1058)
.+..+++|+.|++++|.+.. ++ .+..+++|++|++++|.+++ ++. +..+++|++|++++|.+.+. ..+..+++|
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L 112 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITDI--SALQNLTNL 112 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTC
T ss_pred cchhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccCc--hHHcCCCcC
Confidence 34566777777777777753 33 36677777777777777764 333 67777777777777777642 356777777
Q ss_pred cEEEeecCCCcCcCCccccccCCcceeecccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCc
Q 043053 244 KMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQN 323 (1058)
Q Consensus 244 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N 323 (1058)
++|++++|.+.+..+ +..+++|++|++++|......+ .+..+++|++|++++|.+.+..+
T Consensus 113 ~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~----------------- 172 (347)
T 4fmz_A 113 RELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP----------------- 172 (347)
T ss_dssp SEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG-----------------
T ss_pred CEEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh-----------------
Confidence 777777777764333 6667777777777775443322 35666666666666666554322
Q ss_pred ccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccc
Q 043053 324 QLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPR 403 (1058)
Q Consensus 324 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 403 (1058)
+..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|++++..+
T Consensus 173 ---------~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~- 238 (347)
T 4fmz_A 173 ---------IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP- 238 (347)
T ss_dssp ---------GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-
T ss_pred ---------hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc-
Confidence 5556666666666666664322 5566666677777776664433 6667777777777777776544
Q ss_pred cccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccc
Q 043053 404 EIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSL 483 (1058)
Q Consensus 404 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 483 (1058)
+..+++|++|++++|.+++. ..+..+++|+.|++++|++++. ..+..+++|+.|++++|++++..+..+..+++|
T Consensus 239 -~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 313 (347)
T 4fmz_A 239 -LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNL 313 (347)
T ss_dssp -GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTC
T ss_pred -hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccC
Confidence 77777777777777777653 4567777777778887777754 357777888888888888877777777778888
Q ss_pred cccccccccCCCCCCCcccCCcccccccccCCccc
Q 043053 484 NKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLT 518 (1058)
Q Consensus 484 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 518 (1058)
+.|+|++|++++..| +..+++|+.|++++|+|+
T Consensus 314 ~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 314 TTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp SEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 888888888876555 777788888888888775
No 288
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3.3e-33 Score=316.53 Aligned_cols=308 Identities=23% Similarity=0.398 Sum_probs=230.7
Q ss_pred cccCCCCCceecccCccccccCCccccCCCccceeeeeccccccccCccccCCCCccEEEccCCcCCCCCCCCcCCCCCc
Q 043053 140 ELGDCSNMTALGLADTQVSGSLPASLGKLSKLQTLSIYTTMISGEIPAEIGNCSELVSLFLYENSLSGSIPPEIGKLKKL 219 (1058)
Q Consensus 140 ~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 219 (1058)
.+..+++|++|+++++.+. .++ .+..+++|++|++++|.+++..+ +..+++|++|++++|.+++ + +.+..+++|
T Consensus 39 ~~~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L 112 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-I-SALQNLTNL 112 (347)
T ss_dssp CHHHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTC
T ss_pred cchhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-c-hHHcCCCcC
Confidence 3557899999999999997 444 48999999999999999985433 9999999999999999985 4 468999999
Q ss_pred ceeecccccccCCCCccccCcCCccEEEeecCCCcCcCCccccccCCcceeecccCccCCCccccccccccchhhhhcCC
Q 043053 220 EELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTN 299 (1058)
Q Consensus 220 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 299 (1058)
++|++++|.+.+. +. +..+++|++|++++|......+ .+..+++|++|++++|.+.+..+ +..+++|++|++++|
T Consensus 113 ~~L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n 187 (347)
T 4fmz_A 113 RELYLNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYN 187 (347)
T ss_dssp SEEECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTS
T ss_pred CEEECcCCcccCc-hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCC
Confidence 9999999999854 33 8999999999999997664444 48999999999999999986554 889999999999999
Q ss_pred cccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCC
Q 043053 300 QISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPP 379 (1058)
Q Consensus 300 ~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 379 (1058)
.+.+..+ +. .+++|+.|++++|.+.+..+ +..+++|++|++++|.+++..+
T Consensus 188 ~l~~~~~--~~------------------------~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~- 238 (347)
T 4fmz_A 188 QIEDISP--LA------------------------SLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP- 238 (347)
T ss_dssp CCCCCGG--GG------------------------GCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-
T ss_pred ccccccc--cc------------------------CCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc-
Confidence 9876432 44 44455555555555553322 4455556666666666554332
Q ss_pred CccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCC
Q 043053 380 EIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGL 459 (1058)
Q Consensus 380 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 459 (1058)
+..+++|++|++++|.++++ ..+..+++|++|++++|++++. ..+..+++|+.|++++|++++..+..|..+++|
T Consensus 239 -~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 313 (347)
T 4fmz_A 239 -LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNL 313 (347)
T ss_dssp -GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTC
T ss_pred -hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccC
Confidence 66667777777777777654 3566777777777777777654 346677777777777777777777777777777
Q ss_pred CeeecCCCccccCCcccccccccccccccccccCC
Q 043053 460 QVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFS 494 (1058)
Q Consensus 460 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 494 (1058)
++|++++|++++..| +..+++|+.|++++|+|+
T Consensus 314 ~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 314 TTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp SEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 777777777775544 667777777777777764
No 289
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=6.2e-34 Score=320.77 Aligned_cols=199 Identities=15% Similarity=0.117 Sum_probs=162.5
Q ss_pred HhhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC---------CCcc
Q 043053 703 LKCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR---------HKNI 773 (1058)
Q Consensus 703 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---------h~ni 773 (1058)
.++|.+.+.||+|+||+||+|.. +|+.||||++........ ........+.+.+|+.+++.++ ||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~---~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~ni 94 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLV---NGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGF 94 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCB---TTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCB
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCcccc---ccccchhHHHHHHHHHHHHHHHHhhccccccCCch
Confidence 47899999999999999999976 689999999965422100 0123344578899999999886 5555
Q ss_pred cceee-----------------EEEc-------------CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHH
Q 043053 774 VRFLG-----------------CCWN-------------RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAA 823 (1058)
Q Consensus 774 v~~~~-----------------~~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~ 823 (1058)
|++.+ ++.+ ++..|+||||+++|++.+.+.. ..+++..++.++.||+
T Consensus 95 v~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 95 IGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLT 171 (336)
T ss_dssp CCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHH
T ss_pred hhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHH
Confidence 55554 4443 6778999999999987777743 5689999999999999
Q ss_pred HHhhccc-ccCCCCeEeCCCCCCcEEEcCCC--------------------CeeeeccccceeccCCCcccccccccCcC
Q 043053 824 QGLAYLH-HDCVPPIVHRDIKANNILIGLEF--------------------EPYIADFGLAKLVDDGDFARSSNTVAGSY 882 (1058)
Q Consensus 824 ~~l~~LH-~~~~~~ivHrDikp~Nill~~~~--------------------~~kl~DfGl~~~~~~~~~~~~~~~~~gt~ 882 (1058)
.||+||| +. +|+||||||+|||++.++ .+||+|||+|+..... ..+||+
T Consensus 172 ~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~ 241 (336)
T 2vuw_A 172 ASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCD 241 (336)
T ss_dssp HHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCC
T ss_pred HHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEee
Confidence 9999999 88 999999999999999887 8999999999876542 347999
Q ss_pred CccCccccccCCCCcccchhhHHHH-HHHHHhCCCCCC
Q 043053 883 GYIAPEYGYMMKITEKSDVYSYGVV-VLEVLTGKQPID 919 (1058)
Q Consensus 883 ~y~aPE~~~~~~~~~~~DvwSlGvv-l~elltg~~P~~ 919 (1058)
.|+|||++.+.. +.++||||+|++ .+++++|..||.
T Consensus 242 ~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 242 VSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp CTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred cccChhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 999999988766 889999998777 778899999984
No 290
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.5e-33 Score=342.62 Aligned_cols=310 Identities=20% Similarity=0.186 Sum_probs=222.1
Q ss_pred CCccceeeeeccccccccCccccCCCCccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEE
Q 043053 168 LSKLQTLSIYTTMISGEIPAEIGNCSELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMID 247 (1058)
Q Consensus 168 l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 247 (1058)
+.+++.|++++|.+....+..+..+++|+.|+|++|.+++..|..|+.+++|++|+|++|.+.+..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 45666677777766644444556667777777777777655556666777777777777776666666666667777777
Q ss_pred eecCCCcCcCCccccccCCcceeecccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCC
Q 043053 248 FSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEG 327 (1058)
Q Consensus 248 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~ 327 (1058)
|++|.+++..+..|+++++|++|++++|.+.+..|..|..+++|++|+|++|.+++.
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~----------------------- 186 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV----------------------- 186 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC-----------------------
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc-----------------------
Confidence 777766655455556666666666666666665555666666666666666665543
Q ss_pred CCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccC
Q 043053 328 SIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGG 407 (1058)
Q Consensus 328 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 407 (1058)
.+..+++|+.|++++|.+.+ +....+|+.|++++|.+....+.. .++|+.|+|++|.+++. ..+..
T Consensus 187 ----~~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~~--~~l~~ 252 (597)
T 3oja_B 187 ----DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTDT--AWLLN 252 (597)
T ss_dssp ----CGGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCCC--GGGGG
T ss_pred ----ChhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCCC--hhhcc
Confidence 13344566666666666653 223345667777777766433222 25788888888888863 67888
Q ss_pred ccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccc
Q 043053 408 LKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKII 487 (1058)
Q Consensus 408 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 487 (1058)
+++|++|+|++|.+++..|..|+.+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+
T Consensus 253 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~ 330 (597)
T 3oja_B 253 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 330 (597)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEE
Confidence 8899999999999988888888889999999999999986 5677788899999999999998 6777888899999999
Q ss_pred cccccCCCCCCCcccCCcccccccccCCcccC
Q 043053 488 LSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTG 519 (1058)
Q Consensus 488 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 519 (1058)
|++|+|.+.. +..+++|+.|++++|++.+
T Consensus 331 L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~ 359 (597)
T 3oja_B 331 LDHNSIVTLK---LSTHHTLKNLTLSHNDWDC 359 (597)
T ss_dssp CCSSCCCCCC---CCTTCCCSEEECCSSCEEH
T ss_pred CCCCCCCCcC---hhhcCCCCEEEeeCCCCCC
Confidence 9999998653 6677899999999999984
No 291
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.98 E-value=3.9e-33 Score=310.09 Aligned_cols=258 Identities=31% Similarity=0.497 Sum_probs=217.8
Q ss_pred Ccccccccccccccc--cCcccccccccchhhhccc-cCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccce
Q 043053 337 SNLQALDLSHNSLTA--SVPAGLFQLQNLTKLLLIS-NDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNF 413 (1058)
Q Consensus 337 ~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 413 (1058)
.+++.|+|++|.+.+ .+|..+..+++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++..|..|..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 467778888888877 6777888888888888884 7887778888888888888888888888778888888888888
Q ss_pred eeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCC-CCCeeecCCCccccCCccccccccccccccccccc
Q 043053 414 LDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLS-GLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNL 492 (1058)
Q Consensus 414 L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 492 (1058)
|+|++|.+++..|..|..+++|++|++++|++++.+|..+..++ +|++|++++|++++.+|..+..+. |+.|+|++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 88888888888888888888888888888888877888888887 888888888888888888888876 8888888888
Q ss_pred CCCCCCCcccCCcccccccccCCcccCCCChhhhhhHHHHHHHhhccCCCCCCCCccccccccccEEecCCCcccCC-CC
Q 043053 493 FSGPIPSSLGLCSSLQLLDLSSNQLTGSVPMELGQIEALEIALNLSCNGLTGPIPAQISALNKLSILDLSHNKLEGN-LN 571 (1058)
Q Consensus 493 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~ 571 (1058)
+++..|..|..+++|+.|++++|++++.+|. +..+++|++|||++|++++. +.
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--------------------------~~~l~~L~~L~Ls~N~l~~~~p~ 262 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK--------------------------VGLSKNLNGLDLRNNRIYGTLPQ 262 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG--------------------------CCCCTTCCEEECCSSCCEECCCG
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc--------------------------ccccCCCCEEECcCCcccCcCCh
Confidence 8888888888888999999998888753332 35678899999999999864 46
Q ss_pred cccccCcceeEEEecccccccCCCccccccCCCccccCCcccccCCCCCC
Q 043053 572 PLAQLDNLVSLNISYNKFTGYLPDNKLFRQLSPTDLAGNEGLCSSRKDSC 621 (1058)
Q Consensus 572 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~~~ 621 (1058)
.+..+++|+.|++++|+++|.+|....+..++..++.+|+++|+.|...|
T Consensus 263 ~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~~C 312 (313)
T 1ogq_A 263 GLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLPAC 312 (313)
T ss_dssp GGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSSCC
T ss_pred HHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCCCC
Confidence 78889999999999999999999988899999999999999999887776
No 292
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=5.9e-32 Score=303.94 Aligned_cols=290 Identities=21% Similarity=0.258 Sum_probs=133.9
Q ss_pred ccceeeeeccccccccCccccCCCCccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEee
Q 043053 170 KLQTLSIYTTMISGEIPAEIGNCSELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFS 249 (1058)
Q Consensus 170 ~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~ 249 (1058)
+|+.++++++.+. .+|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|.+.+..|..|..+++|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4455555555444 3443332 345555555555544444445555555555555555554444445555555555555
Q ss_pred cCCCcCcCCccccccCCcceeecccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCC
Q 043053 250 LNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSI 329 (1058)
Q Consensus 250 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 329 (1058)
+|.++ .+|..+. ++|++|++++|.+....+..|..+++|++|++++|.++. .+..
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~----------------------~~~~ 165 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLEN----------------------SGFE 165 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBG----------------------GGSC
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCcccc----------------------CCCC
Confidence 55544 2222222 344444444444443333334444444444444444331 0123
Q ss_pred ChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCcc
Q 043053 330 PSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLK 409 (1058)
Q Consensus 330 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 409 (1058)
+..|..+ +|+.|++++|++++ +|..+. ++|++|+++ +|.+++..+..|..++
T Consensus 166 ~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~------------------------~n~i~~~~~~~l~~l~ 217 (332)
T 2ft3_A 166 PGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLD------------------------HNKIQAIELEDLLRYS 217 (332)
T ss_dssp TTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCC------------------------SSCCCCCCTTSSTTCT
T ss_pred cccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECC------------------------CCcCCccCHHHhcCCC
Confidence 3344444 55555555555553 333222 344444444 4444444444444444
Q ss_pred ccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccc------cccc
Q 043053 410 TLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGR------LVSL 483 (1058)
Q Consensus 410 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~------l~~L 483 (1058)
+|++|+|++|++++..+..|..+++|+.|++++|+++ .+|..+..+++|++|++++|+|++..+..|.. ...|
T Consensus 218 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l 296 (332)
T 2ft3_A 218 KLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYY 296 (332)
T ss_dssp TCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCB
T ss_pred CCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccc
Confidence 4444444444444444444444444444444444444 23444444555555555555554433333332 2345
Q ss_pred cccccccccCC--CCCCCcccCCcccccccccCCc
Q 043053 484 NKIILSKNLFS--GPIPSSLGLCSSLQLLDLSSNQ 516 (1058)
Q Consensus 484 ~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~l~~N~ 516 (1058)
+.|++++|++. +..|..|..+++|+.|++++|+
T Consensus 297 ~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 297 NGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cceEeecCcccccccCcccccccchhhhhhccccc
Confidence 56666666655 4555566666666666666653
No 293
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=7e-32 Score=303.14 Aligned_cols=289 Identities=20% Similarity=0.282 Sum_probs=146.4
Q ss_pred CccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCcCCccccccCCcceeecc
Q 043053 194 ELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMIS 273 (1058)
Q Consensus 194 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 273 (1058)
+|+.++++++.++ .+|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|+++++|++|+++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 3444455444444 3333322 344445555554444433444444445555555444444444444444444444444
Q ss_pred cCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccccccccccccc--
Q 043053 274 DNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTA-- 351 (1058)
Q Consensus 274 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-- 351 (1058)
+|.++. +|..+. ++|++|++++|++++.. +..|..+++|+.|++++|.+..
T Consensus 109 ~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~------------------------~~~~~~l~~L~~L~l~~n~l~~~~ 161 (330)
T 1xku_A 109 KNQLKE-LPEKMP--KTLQELRVHENEITKVR------------------------KSVFNGLNQMIVVELGTNPLKSSG 161 (330)
T ss_dssp SSCCSB-CCSSCC--TTCCEEECCSSCCCBBC------------------------HHHHTTCTTCCEEECCSSCCCGGG
T ss_pred CCcCCc-cChhhc--ccccEEECCCCcccccC------------------------HhHhcCCccccEEECCCCcCCccC
Confidence 444442 221111 33444444444433332 2233333333334444333321
Q ss_pred cCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccC
Q 043053 352 SVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGD 431 (1058)
Q Consensus 352 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 431 (1058)
..+..+..+++|++|++++|.++. +|..+. ++|++|++++|++++..+..|..+++|++|+|++|++++..+..+..
T Consensus 162 ~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 238 (330)
T 1xku_A 162 IENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLAN 238 (330)
T ss_dssp BCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGG
T ss_pred cChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccC
Confidence 233333344444444444444442 222222 45666666666666665666666666666666666666555556666
Q ss_pred CcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccc------cccccccccccccCCC--CCCCcccC
Q 043053 432 CTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGR------LVSLNKIILSKNLFSG--PIPSSLGL 503 (1058)
Q Consensus 432 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~------l~~L~~L~Ls~N~l~~--~~~~~~~~ 503 (1058)
+++|+.|+|++|+++ .+|..+..+++|++|++++|+|++..+..|.. ...|+.|++++|++.. +.|..|..
T Consensus 239 l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~ 317 (330)
T 1xku_A 239 TPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRC 317 (330)
T ss_dssp STTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTT
T ss_pred CCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCcccccc
Confidence 666666666666666 35556666666666666666666555555533 2566677777777653 55667777
Q ss_pred CcccccccccCCc
Q 043053 504 CSSLQLLDLSSNQ 516 (1058)
Q Consensus 504 l~~L~~L~l~~N~ 516 (1058)
+.+++.++|++|+
T Consensus 318 ~~~l~~l~L~~N~ 330 (330)
T 1xku_A 318 VYVRAAVQLGNYK 330 (330)
T ss_dssp CCCGGGEEC----
T ss_pred ccceeEEEecccC
Confidence 7777777777774
No 294
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=7.9e-32 Score=302.88 Aligned_cols=269 Identities=20% Similarity=0.282 Sum_probs=180.9
Q ss_pred CccEEEeecCCCcCcCCccccccCCcceeecccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhcc
Q 043053 242 SLKMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAW 321 (1058)
Q Consensus 242 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~ 321 (1058)
+|+.|++++|.+++..+..|.++++|++|++++|.+++..|..|..+++|++|+|++|+++.+.+. +. ++|++|+++
T Consensus 55 ~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~-~~--~~L~~L~l~ 131 (332)
T 2ft3_A 55 DTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPN-LP--SSLVELRIH 131 (332)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCSCCSS-CC--TTCCEEECC
T ss_pred CCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCccCcc-cc--ccCCEEECC
Confidence 444444444444443344444444444444444444444444444444455555555544422111 11 233333333
Q ss_pred CcccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCc
Q 043053 322 QNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLI 401 (1058)
Q Consensus 322 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 401 (1058)
+|++++..+..|..+++|+.|++++|.++. .+..+..|..+ +|+.|++++|+++++.
T Consensus 132 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~----------------------~~~~~~~~~~l-~L~~L~l~~n~l~~l~ 188 (332)
T 2ft3_A 132 DNRIRKVPKGVFSGLRNMNCIEMGGNPLEN----------------------SGFEPGAFDGL-KLNYLRISEAKLTGIP 188 (332)
T ss_dssp SSCCCCCCSGGGSSCSSCCEEECCSCCCBG----------------------GGSCTTSSCSC-CCSCCBCCSSBCSSCC
T ss_pred CCccCccCHhHhCCCccCCEEECCCCcccc----------------------CCCCcccccCC-ccCEEECcCCCCCccC
Confidence 333333333344444555555555554431 12455666666 7888888888888653
Q ss_pred cccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccc
Q 043053 402 PREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLV 481 (1058)
Q Consensus 402 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 481 (1058)
. .+. ++|++|+|++|++++..+..|..+++|+.|++++|++++..+..|..+++|++|+|++|+++ .+|..+..++
T Consensus 189 ~-~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~ 264 (332)
T 2ft3_A 189 K-DLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLK 264 (332)
T ss_dssp S-SSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCT
T ss_pred c-ccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCc
Confidence 3 332 78999999999999988899999999999999999999988889999999999999999998 7888899999
Q ss_pred cccccccccccCCCCCCCcccCC------cccccccccCCccc--CCCChhhhhhHHHHHHHhhccCC
Q 043053 482 SLNKIILSKNLFSGPIPSSLGLC------SSLQLLDLSSNQLT--GSVPMELGQIEALEIALNLSCNG 541 (1058)
Q Consensus 482 ~L~~L~Ls~N~l~~~~~~~~~~l------~~L~~L~l~~N~l~--~~~p~~~~~l~~l~~~l~ls~N~ 541 (1058)
+|+.|+|++|+|++..+..|..+ .+|+.|++++|++. +..|..|..+..+.. +++++|+
T Consensus 265 ~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~-l~l~~n~ 331 (332)
T 2ft3_A 265 LLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLA-IQFGNYK 331 (332)
T ss_dssp TCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTT-EEC----
T ss_pred cCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhh-hhccccc
Confidence 99999999999998888877653 67999999999997 667778887777763 7777763
No 295
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1.4e-31 Score=300.75 Aligned_cols=289 Identities=19% Similarity=0.247 Sum_probs=225.1
Q ss_pred CcceeecccccccCCCCccccCcCCccEEEeecCCCcCcCCccccccCCcceeecccCccCCCccccccccccchhhhhc
Q 043053 218 KLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLD 297 (1058)
Q Consensus 218 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 297 (1058)
+|+.++++++.+. .+|..+. ++|+.|+|++|.+++..+..|+++++|++|++++|.+++..|..|..+++|++|+|+
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 5666666666665 3444332 456666666666665555556666666666666666665555556666666666666
Q ss_pred CCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCC--
Q 043053 298 TNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISG-- 375 (1058)
Q Consensus 298 ~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-- 375 (1058)
+|+++.+ |..+. ++|++|++++|++++..+..+..+++|++|++++|.+..
T Consensus 109 ~n~l~~l-------------------------~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 161 (330)
T 1xku_A 109 KNQLKEL-------------------------PEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSG 161 (330)
T ss_dssp SSCCSBC-------------------------CSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGG
T ss_pred CCcCCcc-------------------------Chhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccC
Confidence 5555422 22222 689999999999998777788999999999999999964
Q ss_pred CCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCcccccc
Q 043053 376 SIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSS 455 (1058)
Q Consensus 376 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 455 (1058)
..+..|.++++|+.|++++|.++.+.. .+. ++|++|++++|++++..|..|..+++|+.|++++|++++..+..|..
T Consensus 162 ~~~~~~~~l~~L~~L~l~~n~l~~l~~-~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 238 (330)
T 1xku_A 162 IENGAFQGMKKLSYIRIADTNITTIPQ-GLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLAN 238 (330)
T ss_dssp BCTTGGGGCTTCCEEECCSSCCCSCCS-SCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGG
T ss_pred cChhhccCCCCcCEEECCCCccccCCc-ccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccC
Confidence 678889999999999999999997643 332 89999999999999888999999999999999999999888889999
Q ss_pred CCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCC------cccccccccCCcccC--CCChhhhh
Q 043053 456 LSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLC------SSLQLLDLSSNQLTG--SVPMELGQ 527 (1058)
Q Consensus 456 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l------~~L~~L~l~~N~l~~--~~p~~~~~ 527 (1058)
+++|++|+|++|+++ .+|..+..+++|+.|+|++|+|++..+..|... ..|+.|++++|++.. ..|..|..
T Consensus 239 l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~ 317 (330)
T 1xku_A 239 TPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRC 317 (330)
T ss_dssp STTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTT
T ss_pred CCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCcccccc
Confidence 999999999999998 788899999999999999999998888877543 788999999999963 55677777
Q ss_pred hHHHHHHHhhccCC
Q 043053 528 IEALEIALNLSCNG 541 (1058)
Q Consensus 528 l~~l~~~l~ls~N~ 541 (1058)
+..+. .+++++|+
T Consensus 318 ~~~l~-~l~L~~N~ 330 (330)
T 1xku_A 318 VYVRA-AVQLGNYK 330 (330)
T ss_dssp CCCGG-GEEC----
T ss_pred cccee-EEEecccC
Confidence 66665 37788774
No 296
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=3.3e-32 Score=302.61 Aligned_cols=248 Identities=29% Similarity=0.462 Sum_probs=125.7
Q ss_pred CcceeecccccccC--CCCccccCcCCccEEEeec-CCCcCcCCccccccCCcceeecccCccCCCccccccccccchhh
Q 043053 218 KLEELFLWQNSLVG--AIPEEIGNCTSLKMIDFSL-NSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQL 294 (1058)
Q Consensus 218 ~L~~L~L~~n~l~~--~~~~~l~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 294 (1058)
+++.|+|++|.+.+ .+|..|.++++|++|+|++ |.+.+.+|..|+.+++|++|++++|.+.+..|..|..+++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 45555555555554 4455555555555555553 55554445445555555555555444444444444444444444
Q ss_pred hhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccc-cchhhhccccCC
Q 043053 295 QLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQ-NLTKLLLISNDI 373 (1058)
Q Consensus 295 ~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l 373 (1058)
+|++|+++ +.+|..|..+++|++|++++|++++.+|..+..++ +|++|++++|.+
T Consensus 131 ~Ls~N~l~------------------------~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l 186 (313)
T 1ogq_A 131 DFSYNALS------------------------GTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186 (313)
T ss_dssp ECCSSEEE------------------------SCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEE
T ss_pred eCCCCccC------------------------CcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCee
Confidence 44444433 34444455555555555555555544454444444 444444444444
Q ss_pred CCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCcccc
Q 043053 374 SGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSL 453 (1058)
Q Consensus 374 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 453 (1058)
++..|..|..++ |+.|+|++|++++..|..|..+++|++|+|++|++++..|. +..+++|++|+|++|+|++.+|..|
T Consensus 187 ~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l 264 (313)
T 1ogq_A 187 TGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGL 264 (313)
T ss_dssp EEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGG
T ss_pred eccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHH
Confidence 444444444444 55555555555555555555555555555555555543333 4445555555555555554555555
Q ss_pred ccCCCCCeeecCCCccccCCccccccccccccccccccc
Q 043053 454 SSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNL 492 (1058)
Q Consensus 454 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 492 (1058)
..+++|++|+|++|++++.+|.. ..+++|+.|++++|+
T Consensus 265 ~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 265 TQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp GGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred hcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 55555555555555555544443 444455555555554
No 297
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.2e-34 Score=342.13 Aligned_cols=374 Identities=19% Similarity=0.149 Sum_probs=243.3
Q ss_pred CCCceecccCccccccCCcc-ccCCCccceeeeeccccccc----cCccccCCCCccEEEccCCcCCCCCCCCcC-CCC-
Q 043053 145 SNMTALGLADTQVSGSLPAS-LGKLSKLQTLSIYTTMISGE----IPAEIGNCSELVSLFLYENSLSGSIPPEIG-KLK- 217 (1058)
Q Consensus 145 ~~L~~L~l~~~~~~~~~~~~-l~~l~~L~~L~l~~n~i~~~----~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~-~l~- 217 (1058)
++|++|++++|++++..... +..+++|++|++++|.+.+. ++..+..+++|++|+|++|.+.+..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 45566666666665433333 55566677777777766542 345556667777777777766543232222 233
Q ss_pred ---CcceeecccccccC----CCCccccCcCCccEEEeecCCCcCcCCcccc-----ccCCcceeecccCccCCCc----
Q 043053 218 ---KLEELFLWQNSLVG----AIPEEIGNCTSLKMIDFSLNSLSGTIPLSIG-----GLSELEEFMISDNNVSGSI---- 281 (1058)
Q Consensus 218 ---~L~~L~L~~n~l~~----~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~l~~n~l~~~~---- 281 (1058)
+|++|+|++|.+++ .++..+..+++|++|+|++|.+++..+..+. ..++|++|++++|.+++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 57777777776663 2355566677777777777776644333332 2346777777777766533
Q ss_pred cccccccccchhhhhcCCcccCcCCCcccc-----cchhhhhhccCcccCCC----CChhhhccCccccccccccccccc
Q 043053 282 PANLANATNLVQLQLDTNQISGLIPPEIGM-----LSKLTVFFAWQNQLEGS----IPSTLASCSNLQALDLSHNSLTAS 352 (1058)
Q Consensus 282 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~-----l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~ 352 (1058)
+..+..+++|++|++++|.+++..+..+.. .++|++|++++|.++.. ++..+..+++|+.|++++|.+.+.
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 444555677777777777766544444432 34677777777777654 456677788888888888888753
Q ss_pred C-----cccccccccchhhhccccCCCCC----CCCCccCCCCCcEEEccCccccCCccccccC-----ccccceeeccC
Q 043053 353 V-----PAGLFQLQNLTKLLLISNDISGS----IPPEIGNCSSLVRLRVGNNRIAGLIPREIGG-----LKTLNFLDLSS 418 (1058)
Q Consensus 353 ~-----~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~Ls~ 418 (1058)
. +..+..+++|++|++++|.++.. ++..+..+++|++|+|++|.+++..+..+.. .++|++|+|++
T Consensus 243 ~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~ 322 (461)
T 1z7x_W 243 GMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKS 322 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCC
Confidence 2 22223477888888888888753 4556677888889999988887554444443 26888999999
Q ss_pred ccCCCC----CCCcccCCcccchhhccCCccCCCCcccccc-----CCCCCeeecCCCcccc----CCcccccccccccc
Q 043053 419 NRLSGS----VPDEIGDCTELQMIDLSHNTLQGSLPNSLSS-----LSGLQVLDVSDNRFSG----QIPASLGRLVSLNK 485 (1058)
Q Consensus 419 N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~ 485 (1058)
|.+++. ++..+..+++|+.|++++|++++..+..+.. .++|++|++++|++++ .+|..+..+++|++
T Consensus 323 n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~ 402 (461)
T 1z7x_W 323 CSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRE 402 (461)
T ss_dssp SCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCE
T ss_pred CCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccE
Confidence 888754 3455667788889999988887654544443 6788999999998875 67777888888999
Q ss_pred cccccccCCCCCCCccc-----CCcccccccccCCccc
Q 043053 486 IILSKNLFSGPIPSSLG-----LCSSLQLLDLSSNQLT 518 (1058)
Q Consensus 486 L~Ls~N~l~~~~~~~~~-----~l~~L~~L~l~~N~l~ 518 (1058)
|+|++|++++.....+. ...+|+.|++.++.+.
T Consensus 403 L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~ 440 (461)
T 1z7x_W 403 LDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 440 (461)
T ss_dssp EECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCC
T ss_pred EECCCCCCCHHHHHHHHHHhccCCcchhheeecccccC
Confidence 99999988753211111 1235666666666655
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.96 E-value=2.2e-34 Score=339.87 Aligned_cols=267 Identities=18% Similarity=0.147 Sum_probs=132.5
Q ss_pred CccccCCCCCceecccCccccccCCccccC-----CCccceeeeecccccccc----CccccCCCCccEEEccCCcCCCC
Q 043053 138 PAELGDCSNMTALGLADTQVSGSLPASLGK-----LSKLQTLSIYTTMISGEI----PAEIGNCSELVSLFLYENSLSGS 208 (1058)
Q Consensus 138 ~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~-----l~~L~~L~l~~n~i~~~~----~~~l~~l~~L~~L~L~~n~l~~~ 208 (1058)
+..+..+++|++|++++|.+.+..+..++. .++|++|++++|.+++.. +..+..+++|++|+|++|.+++.
T Consensus 106 ~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~ 185 (461)
T 1z7x_W 106 SSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEA 185 (461)
T ss_dssp HHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchH
Confidence 444455555555555555554333333222 334555555555555422 33344455666666666655433
Q ss_pred CCCCcC-----CCCCcceeecccccccCC----CCccccCcCCccEEEeecCCCcCcCC-----ccccccCCcceeeccc
Q 043053 209 IPPEIG-----KLKKLEELFLWQNSLVGA----IPEEIGNCTSLKMIDFSLNSLSGTIP-----LSIGGLSELEEFMISD 274 (1058)
Q Consensus 209 ~~~~~~-----~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~L~~n~l~~~~~-----~~~~~l~~L~~L~l~~ 274 (1058)
.+..+. .+++|++|++++|.+++. ++..+..+++|++|++++|.+++... ..+..+++|++|++++
T Consensus 186 ~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~ 265 (461)
T 1z7x_W 186 GVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWE 265 (461)
T ss_dssp HHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcC
Confidence 222222 134566666666655542 23444555666666666665553221 1122355666666666
Q ss_pred CccCCC----ccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCccccccccccccc
Q 043053 275 NNVSGS----IPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLT 350 (1058)
Q Consensus 275 n~l~~~----~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 350 (1058)
|.++.. ++..+..+++|++|+|++|.+++..+..+... .....++|+.|++++|.++
T Consensus 266 n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~-------------------l~~~~~~L~~L~L~~n~l~ 326 (461)
T 1z7x_W 266 CGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCET-------------------LLEPGCQLESLWVKSCSFT 326 (461)
T ss_dssp SCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHH-------------------HTSTTCCCCEEECTTSCCB
T ss_pred CCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHH-------------------hccCCccceeeEcCCCCCc
Confidence 655532 34444455566666666665544322222211 0001124444444444444
Q ss_pred cc----CcccccccccchhhhccccCCCCCCCCCcc-----CCCCCcEEEccCccccC----CccccccCccccceeecc
Q 043053 351 AS----VPAGLFQLQNLTKLLLISNDISGSIPPEIG-----NCSSLVRLRVGNNRIAG----LIPREIGGLKTLNFLDLS 417 (1058)
Q Consensus 351 ~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~Ls 417 (1058)
+. ++..+..+++|++|++++|.+++..+..+. ..++|++|+|++|++++ ..+..+..+++|++|+|+
T Consensus 327 ~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~ 406 (461)
T 1z7x_W 327 AACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLS 406 (461)
T ss_dssp GGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECC
T ss_pred hHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECC
Confidence 32 222333334444444444444432222222 14577777777777774 456667777788888888
Q ss_pred CccCCC
Q 043053 418 SNRLSG 423 (1058)
Q Consensus 418 ~N~l~~ 423 (1058)
+|++++
T Consensus 407 ~N~i~~ 412 (461)
T 1z7x_W 407 NNCLGD 412 (461)
T ss_dssp SSSCCH
T ss_pred CCCCCH
Confidence 887764
No 299
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.3e-29 Score=302.69 Aligned_cols=196 Identities=16% Similarity=0.082 Sum_probs=136.2
Q ss_pred eeccccceEEEEE-EecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHccc-CCCcccceeeEEEcCCCceE
Q 043053 711 VIGKGCSGVVYRA-DMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSI-RHKNIVRFLGCCWNRNNRLL 788 (1058)
Q Consensus 711 ~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 788 (1058)
..+.|++|.+..+ ..-.|+.||||++........ ....+.+...++|.+|+++|+++ .|+||+++++++.++...||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~-~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGI-LTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTC-SCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEeccccccc-chhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 4567888877776 555699999999854322111 11112334457899999999999 69999999999999999999
Q ss_pred EEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccccceeccC
Q 043053 789 MYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDD 868 (1058)
Q Consensus 789 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~~~~~~ 868 (1058)
||||++||+|.+++++. ++++.. +|+.||++||+|+|++ |||||||||+|||++.+|.+||+|||+|+....
T Consensus 320 VMEyv~G~~L~d~i~~~--~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAG--EEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp EEECCCSEEHHHHHHTT--CCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred EEecCCCCcHHHHHHhC--CCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 99999999999999863 556653 5899999999999999 999999999999999999999999999987654
Q ss_pred CCcccccccccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCCC
Q 043053 869 GDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPI 918 (1058)
Q Consensus 869 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P~ 918 (1058)
.. ......+||+.|||||++.+. +..++|+||+|+++|++.++..|+
T Consensus 392 ~~--~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 392 DC--SWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp ----CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CC--ccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccchh
Confidence 32 234567899999999998764 567899999999998887665443
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=2.6e-29 Score=284.92 Aligned_cols=281 Identities=16% Similarity=0.165 Sum_probs=163.9
Q ss_pred CCCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCcCCccccccCCcceeecccCccCCCccccccccccchhh
Q 043053 215 KLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQL 294 (1058)
Q Consensus 215 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 294 (1058)
.|+.....+++++.++ .+|..+. ++|++|++++|.+++..+..|.++++|++|++++|.+++..+..|.++++|++|
T Consensus 29 ~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 29 SCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp EECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 3444455666666666 3444433 366666666666665555556666666666666666665555556666666666
Q ss_pred hhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccccccccccccccCc-ccccccccchhhhcccc-C
Q 043053 295 QLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVP-AGLFQLQNLTKLLLISN-D 372 (1058)
Q Consensus 295 ~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N-~ 372 (1058)
+|++|+|+++.+. .|..+++|++|++++|++++..+ ..+..+++|++|++++| .
T Consensus 106 ~Ls~n~l~~~~~~------------------------~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~ 161 (353)
T 2z80_A 106 DLSYNYLSNLSSS------------------------WFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDT 161 (353)
T ss_dssp ECCSSCCSSCCHH------------------------HHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSS
T ss_pred ECCCCcCCcCCHh------------------------HhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCcc
Confidence 6666665544333 34445555555555555543222 23444555555555555 2
Q ss_pred CCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccc
Q 043053 373 ISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNS 452 (1058)
Q Consensus 373 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 452 (1058)
+.+..+..|.++++|++|++++|++++..|..|..+++|++|++++|++....+..+..+++|+.|++++|.+++..+..
T Consensus 162 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 241 (353)
T 2z80_A 162 FTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSE 241 (353)
T ss_dssp CCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC-
T ss_pred ccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccc
Confidence 44444445555555555555555555555555555555555555555554332223334555555555555555443332
Q ss_pred c---ccCCCCCeeecCCCcccc----CCcccccccccccccccccccCCCCCCCcccCCcccccccccCCcccCCCC
Q 043053 453 L---SSLSGLQVLDVSDNRFSG----QIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVP 522 (1058)
Q Consensus 453 ~---~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 522 (1058)
+ .....++.++|++|.+++ .+|..+..+++|+.|+|++|+++...+..|..+++|++|++++|++.+..|
T Consensus 242 l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 242 LSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp -----CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 2 234556667777766654 356677888888888888888885444446889999999999999987554
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=9.6e-29 Score=274.41 Aligned_cols=252 Identities=23% Similarity=0.302 Sum_probs=197.1
Q ss_pred cEEEeecCCCcCcCCccccccCCcceeecccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCc
Q 043053 244 KMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQN 323 (1058)
Q Consensus 244 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N 323 (1058)
+.++++++.++ .+|..+. ++|++|++++|.++...+..|..+++|++|+|++|+++..
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~------------------- 67 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFK------------------- 67 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEE-------------------
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcc-------------------
Confidence 45666666666 3343332 4566666666666644444455666666666666655422
Q ss_pred ccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCC-CCccCCCCCcEEEccCccccCCcc
Q 043053 324 QLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIP-PEIGNCSSLVRLRVGNNRIAGLIP 402 (1058)
Q Consensus 324 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~ 402 (1058)
+..+..+..+++|++|++++|.+. .+|..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+++..+
T Consensus 68 ---~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 143 (306)
T 2z66_A 68 ---GCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFN 143 (306)
T ss_dssp ---EEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECST
T ss_pred ---cCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccch
Confidence 112456667788888888888888 467778888888888888888886655 578888999999999999988888
Q ss_pred ccccCccccceeeccCccCCC-CCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccc
Q 043053 403 REIGGLKTLNFLDLSSNRLSG-SVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLV 481 (1058)
Q Consensus 403 ~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 481 (1058)
..|..+++|++|+|++|.+++ ..|..+..+++|+.|++++|++++..|..|..+++|++|+|++|++++..+..+..++
T Consensus 144 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 223 (306)
T 2z66_A 144 GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLN 223 (306)
T ss_dssp TTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCT
T ss_pred hhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcc
Confidence 888999999999999999876 5788888999999999999999987788899999999999999999877777888899
Q ss_pred cccccccccccCCCCCCCcccCCc-ccccccccCCcccCCC
Q 043053 482 SLNKIILSKNLFSGPIPSSLGLCS-SLQLLDLSSNQLTGSV 521 (1058)
Q Consensus 482 ~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~ 521 (1058)
+|+.|+|++|++.+..|..+..++ +|++|++++|++++..
T Consensus 224 ~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 224 SLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp TCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred cCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 999999999999988888888884 8999999999998653
No 302
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=9e-32 Score=328.19 Aligned_cols=402 Identities=13% Similarity=0.070 Sum_probs=195.5
Q ss_pred CcccCCEEeccccCCCCcccccccc-chh-hhHHhhhhccc-cC-CChhhhcccccchhhhcCCCccccCC----CCccc
Q 043053 70 KLHNLEELILNSNQLTGKIPVELSN-CKS-LRKLLLFDNAL-AG-NIPAELGRLSNLEEMRAGGNKDIVGK----IPAEL 141 (1058)
Q Consensus 70 ~l~~L~~L~L~~n~~~~~~p~~l~~-l~~-L~~L~L~~n~~-~~-~~p~~l~~l~~L~~L~l~~~~~~~~~----l~~~l 141 (1058)
++++|++|+|++|.+.+..+..+.. +++ |++|+|++|.. .. .++..+.++++|++|++++|. +.+. ++..+
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~-~~~~~~~~l~~~~ 188 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESS-FSEKDGKWLHELA 188 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCE-EECCCSHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECcccc-ccCcchhHHHHHH
Confidence 4566666666666555444444444 233 66666655541 10 122223345555555555553 1122 11223
Q ss_pred cCCCCCceecccCcccc----ccCCccccCCCccceeeeeccccccccCccccCCCCccEEEccCCcCC---CCCCCCcC
Q 043053 142 GDCSNMTALGLADTQVS----GSLPASLGKLSKLQTLSIYTTMISGEIPAEIGNCSELVSLFLYENSLS---GSIPPEIG 214 (1058)
Q Consensus 142 ~~l~~L~~L~l~~~~~~----~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~---~~~~~~~~ 214 (1058)
..+++|++|++++|.+. +.++..+.++++|+.|++++|.+.+ ++..+..+++|++|+++.+... ...+..+.
T Consensus 189 ~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~ 267 (592)
T 3ogk_B 189 QHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLV 267 (592)
T ss_dssp HHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCC
T ss_pred hcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhh
Confidence 34555555555555554 1223333445555555555555542 4444555555555555532221 12223444
Q ss_pred CCCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCcCC-ccccccCCcceeecccCccCCCccccccccccchh
Q 043053 215 KLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIP-LSIGGLSELEEFMISDNNVSGSIPANLANATNLVQ 293 (1058)
Q Consensus 215 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 293 (1058)
.+++|+.|+++++... .++..+..+++|++|+|++|.+++... ..+..+++|++|+++++......+..+..+++|++
T Consensus 268 ~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~ 346 (592)
T 3ogk_B 268 FPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKR 346 (592)
T ss_dssp CCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCE
T ss_pred ccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCE
Confidence 4555555555543222 334444455555555555555443222 22344555555555522111112222233444444
Q ss_pred hhhcC---CcccCcCCCcccccchhhhhhccCcccCCCC-ChhhhccCcccccccccccccccCcccccc-cccchhhhc
Q 043053 294 LQLDT---NQISGLIPPEIGMLSKLTVFFAWQNQLEGSI-PSTLASCSNLQALDLSHNSLTASVPAGLFQ-LQNLTKLLL 368 (1058)
Q Consensus 294 L~L~~---N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~L 368 (1058)
|+|++ +..... ..|.++... ...+..+++|++|+++.|++++..+..+.. +++|+.|++
T Consensus 347 L~L~~g~~~~~~~~----------------~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l 410 (592)
T 3ogk_B 347 LRIERGADEQGMED----------------EEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRL 410 (592)
T ss_dssp EEEECCCCSSTTSS----------------TTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEE
T ss_pred EEeecCcccccccc----------------ccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEE
Confidence 44441 000000 012333221 112344667777777777776655555554 666777777
Q ss_pred c----ccCCCCC-----CCCCccCCCCCcEEEccCc--cccCCcccccc-CccccceeeccCccCCCC-CCCcccCCccc
Q 043053 369 I----SNDISGS-----IPPEIGNCSSLVRLRVGNN--RIAGLIPREIG-GLKTLNFLDLSSNRLSGS-VPDEIGDCTEL 435 (1058)
Q Consensus 369 ~----~N~l~~~-----~~~~~~~l~~L~~L~L~~N--~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L 435 (1058)
+ .|.+++. ++..+.++++|++|+|++| .+++..+..+. .+++|++|+|++|++++. .+..+..+++|
T Consensus 411 ~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L 490 (592)
T 3ogk_B 411 VLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNL 490 (592)
T ss_dssp EECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTC
T ss_pred eecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCccc
Confidence 5 5555542 1222455677777777643 25443333333 366777777777776642 23344566777
Q ss_pred chhhccCCccCCC-CccccccCCCCCeeecCCCccccCCcccc-ccccccccccccc
Q 043053 436 QMIDLSHNTLQGS-LPNSLSSLSGLQVLDVSDNRFSGQIPASL-GRLVSLNKIILSK 490 (1058)
Q Consensus 436 ~~L~l~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~ 490 (1058)
+.|++++|.+++. ++..+..+++|++|+|++|+++......+ ..++.+....+..
T Consensus 491 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~ 547 (592)
T 3ogk_B 491 QKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPS 547 (592)
T ss_dssp CEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECC
T ss_pred CeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecC
Confidence 7777777776543 33344567777777777777765433323 2344444444433
No 303
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=1.7e-31 Score=325.83 Aligned_cols=425 Identities=14% Similarity=0.124 Sum_probs=282.8
Q ss_pred CccccCCCCCcEEEccCCcC---CCCCCCCCC------------CCCcccEEecCCCCCCCCCChhhcCc--ccCCEEec
Q 043053 17 PTNLSSFKHLQTLVISDANL---TGSIPFDIG------------DCVGLIVLDFSSNNLVGTLPSSLGKL--HNLEELIL 79 (1058)
Q Consensus 17 p~~~~~~~~L~~L~l~~~~~---~~~~p~~l~------------~l~~L~~L~l~~~~i~~~lp~~l~~l--~~L~~L~L 79 (1058)
+..+.++++|++|+|++|.. .+.+|...+ .|++|++|+|++|.+++..+..+..+ .+|++|+|
T Consensus 66 ~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L 145 (592)
T 3ogk_B 66 DRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKL 145 (592)
T ss_dssp HHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEE
T ss_pred HHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEEC
Confidence 44567899999999998654 234555555 68999999999999987777778774 45999999
Q ss_pred cccC-CCC-ccccccccchhhhHHhhhhccccCC----ChhhhcccccchhhhcCCCccc---cCCCCccccCCCCCcee
Q 043053 80 NSNQ-LTG-KIPVELSNCKSLRKLLLFDNALAGN----IPAELGRLSNLEEMRAGGNKDI---VGKIPAELGDCSNMTAL 150 (1058)
Q Consensus 80 ~~n~-~~~-~~p~~l~~l~~L~~L~L~~n~~~~~----~p~~l~~l~~L~~L~l~~~~~~---~~~l~~~l~~l~~L~~L 150 (1058)
++|. +.. .++..+.+|++|++|+|++|.+.+. ++..+.++++|++|++++|... ...++..+..+++|+.|
T Consensus 146 ~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L 225 (592)
T 3ogk_B 146 DKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSV 225 (592)
T ss_dssp ESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEE
T ss_pred cCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEE
Confidence 9996 221 2334445899999999999998765 4556678999999999988721 12344456779999999
Q ss_pred cccCccccccCCccccCCCccceeeeeccccc---cccCccccCCCCccEEEccCCcCCCCCCCCcCCCCCcceeecccc
Q 043053 151 GLADTQVSGSLPASLGKLSKLQTLSIYTTMIS---GEIPAEIGNCSELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQN 227 (1058)
Q Consensus 151 ~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~i~---~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 227 (1058)
++++|.+. .++..+.++++|+.|+++.+... ...+..+..+++|+.|+++++... .+|..+..+++|++|+|++|
T Consensus 226 ~L~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~ 303 (592)
T 3ogk_B 226 KVGDFEIL-ELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYA 303 (592)
T ss_dssp ECSSCBGG-GGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTC
T ss_pred eccCccHH-HHHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCC
Confidence 99999987 47788999999999999864332 345567889999999999987544 67888889999999999999
Q ss_pred cccCCCC-ccccCcCCccEEEeecCCCcC-cCCccccccCCcceeeccc-----------CccCCCcc-ccccccccchh
Q 043053 228 SLVGAIP-EEIGNCTSLKMIDFSLNSLSG-TIPLSIGGLSELEEFMISD-----------NNVSGSIP-ANLANATNLVQ 293 (1058)
Q Consensus 228 ~l~~~~~-~~l~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~l~~-----------n~l~~~~~-~~~~~l~~L~~ 293 (1058)
.+.+... ..+..+++|++|+++ +.+.+ .++..+..+++|++|++++ |.+++... ..+..+++|++
T Consensus 304 ~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 382 (592)
T 3ogk_B 304 LLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEY 382 (592)
T ss_dssp CCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSE
T ss_pred cCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeE
Confidence 9764433 336889999999999 44443 3344446789999999994 55653322 23445788888
Q ss_pred hhhcCCcccCcCCCcccc-cchhhhhhcc----CcccCCC-----CChhhhccCccccccccccc--ccccCcccccccc
Q 043053 294 LQLDTNQISGLIPPEIGM-LSKLTVFFAW----QNQLEGS-----IPSTLASCSNLQALDLSHNS--LTASVPAGLFQLQ 361 (1058)
Q Consensus 294 L~L~~N~i~~~~~~~~~~-l~~L~~L~l~----~N~l~~~-----~~~~~~~l~~L~~L~Ls~N~--l~~~~~~~~~~l~ 361 (1058)
|+++.|.+++..+..+.. +++|+.|++. .|.+++. ++..+.++++|+.|++++|. +++..+..+..
T Consensus 383 L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~-- 460 (592)
T 3ogk_B 383 MAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQ-- 460 (592)
T ss_dssp EEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHH--
T ss_pred EEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHH--
Confidence 888878877655544443 5666666664 4555543 22234556666666665322 33322222221
Q ss_pred cchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCC-ccccccCccccceeeccCccCCCC-CCCcccCCcccchhh
Q 043053 362 NLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGL-IPREIGGLKTLNFLDLSSNRLSGS-VPDEIGDCTELQMID 439 (1058)
Q Consensus 362 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~ 439 (1058)
.+++|+.|+|++|++++. .+..+.++++|++|+|++|.+++. .+..+..+++|+.|+
T Consensus 461 ---------------------~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 519 (592)
T 3ogk_B 461 ---------------------YSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLW 519 (592)
T ss_dssp ---------------------SCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEE
T ss_pred ---------------------hCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeE
Confidence 244555555555555432 233345555666666666655422 222233455666666
Q ss_pred ccCCccCCCCcccc-ccCCCCCeeecCCC
Q 043053 440 LSHNTLQGSLPNSL-SSLSGLQVLDVSDN 467 (1058)
Q Consensus 440 l~~N~l~~~~~~~~-~~l~~L~~L~L~~N 467 (1058)
|++|++++.....+ ..++.+....+..+
T Consensus 520 ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 520 VQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp EESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred CcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 66666554322222 23455544444433
No 304
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=4.5e-29 Score=283.01 Aligned_cols=278 Identities=19% Similarity=0.206 Sum_probs=156.4
Q ss_pred CCCccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCcCCccccccCCcceee
Q 043053 192 CSELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFM 271 (1058)
Q Consensus 192 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 271 (1058)
|+.....+++++.++ .+|..+. ++|++|++++|.+++..+..|..+++|++|++++|.+++..+..|+++++|++|+
T Consensus 30 C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 30 CDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp ECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 344445666666666 4555443 3677777777776655555666777777777777777666666677777777777
Q ss_pred cccCccCCCccccccccccchhhhhcCCcccCcCC-CcccccchhhhhhccCcccCCCCChhhhccCccccccccccccc
Q 043053 272 ISDNNVSGSIPANLANATNLVQLQLDTNQISGLIP-PEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLT 350 (1058)
Q Consensus 272 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 350 (1058)
+++|.+++..+..|..+++|++|+|++|+++++.+ ..|..+++|++|++++|+ .+.
T Consensus 107 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~-----------------------~~~ 163 (353)
T 2z80_A 107 LSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMD-----------------------TFT 163 (353)
T ss_dssp CCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESS-----------------------SCC
T ss_pred CCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCc-----------------------ccc
Confidence 77777776555556777777777777777665433 234444444444433331 233
Q ss_pred ccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCccc
Q 043053 351 ASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIG 430 (1058)
Q Consensus 351 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 430 (1058)
...+..+..+++|++|++++|.+++..|..|..+++|++|++++|+++.+.+..+..+++|++|++++|++++..+..+.
T Consensus 164 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 243 (353)
T 2z80_A 164 KIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELS 243 (353)
T ss_dssp EECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC---
T ss_pred ccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccc
Confidence 22233333444444444444444444444555555555555555555444333344455555555555555544333222
Q ss_pred ---CCcccchhhccCCccCC----CCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCC
Q 043053 431 ---DCTELQMIDLSHNTLQG----SLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSG 495 (1058)
Q Consensus 431 ---~l~~L~~L~l~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 495 (1058)
....++.++|++|.+++ .+|..+..+++|+.|++++|+++...+..|..+++|+.|+|++|++.+
T Consensus 244 ~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 244 TGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp ---CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccC
Confidence 23344555555555543 255667777777777777777773333335677777777777777764
No 305
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=1.9e-28 Score=272.06 Aligned_cols=281 Identities=21% Similarity=0.222 Sum_probs=166.9
Q ss_pred cEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCc--CCccccccCCcceeecc
Q 043053 196 VSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGT--IPLSIGGLSELEEFMIS 273 (1058)
Q Consensus 196 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~--~~~~~~~l~~L~~L~l~ 273 (1058)
+.++.+++.++ .+|..+. ++|++|+|++|.+....+..|..+++|++|+|++|.++.. .+..+.++++|++|+++
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 34555565555 4444332 4566666666666644334456666666666666666522 23444556666666666
Q ss_pred cCccCCCccccccccccchhhhhcCCcccCcCC-CcccccchhhhhhccCcccCCCCChhhhccCccccccccccccccc
Q 043053 274 DNNVSGSIPANLANATNLVQLQLDTNQISGLIP-PEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTAS 352 (1058)
Q Consensus 274 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 352 (1058)
+|.+. ..+..+..+++|++|++++|++++..+ ..|..+ ++|++|++++|.+.+.
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l------------------------~~L~~L~l~~n~l~~~ 141 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL------------------------RNLIYLDISHTHTRVA 141 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTC------------------------TTCCEEECTTSCCEEC
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhc------------------------cCCCEEECCCCcCCcc
Confidence 66665 244456666666666666666655433 233334 4444444444444443
Q ss_pred CcccccccccchhhhccccCCCC-CCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccC
Q 043053 353 VPAGLFQLQNLTKLLLISNDISG-SIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGD 431 (1058)
Q Consensus 353 ~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 431 (1058)
.+..+..+++|++|++++|.+++ ..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..+..
T Consensus 142 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 221 (306)
T 2z66_A 142 FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 221 (306)
T ss_dssp STTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTT
T ss_pred chhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccC
Confidence 44444444444444444444443 34556666677777777777777666667777777777777777777666666777
Q ss_pred CcccchhhccCCccCCCCccccccCC-CCCeeecCCCccccCCc--ccccccccccccccccccCCCCCCCcccCC
Q 043053 432 CTELQMIDLSHNTLQGSLPNSLSSLS-GLQVLDVSDNRFSGQIP--ASLGRLVSLNKIILSKNLFSGPIPSSLGLC 504 (1058)
Q Consensus 432 l~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 504 (1058)
+++|+.|++++|++++..|..+..++ +|++|+|++|++++..+ .....+...+.+....+.+....|..+.+.
T Consensus 222 l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g~ 297 (306)
T 2z66_A 222 LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGM 297 (306)
T ss_dssp CTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGTTC
T ss_pred cccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhCCc
Confidence 77777777777777777777777774 78888888887765322 112234455566667777776667766653
No 306
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=4.1e-28 Score=266.32 Aligned_cols=238 Identities=24% Similarity=0.250 Sum_probs=159.2
Q ss_pred CCcceeecccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcc-cCCCCChhhhccCcccccc
Q 043053 265 SELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQ-LEGSIPSTLASCSNLQALD 343 (1058)
Q Consensus 265 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~L~ 343 (1058)
++|++|++++|.+++..+..|..+++|++|+|++|+++++.+..|..+++|++|++++|. ++...+..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 344444444444444444444455555555555555554445555555555555555554 4445556666677777777
Q ss_pred cccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCC
Q 043053 344 LSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSG 423 (1058)
Q Consensus 344 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 423 (1058)
+++|++++..+..+..+++|++|++++|.+++..+..|..+++|++|+|++|+|+++.+..|..+++|++|+|++|++++
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 191 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccc
Confidence 77777776656666677777777777777776666667778888888888888887777778888888888888888887
Q ss_pred CCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccC
Q 043053 424 SVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGL 503 (1058)
Q Consensus 424 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 503 (1058)
..|..|..+++|+.|++++|++++..+..|..+++|+.|++++|++....+. ..-...++.+..+.|.+....|..+.+
T Consensus 192 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~-~~~~~~l~~~~~~~~~~~c~~p~~l~g 270 (285)
T 1ozn_A 192 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQRLAG 270 (285)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG-HHHHHHHHHCCSEECCCBEEESGGGTT
T ss_pred cCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc-HHHHHHHHhcccccCccccCCchHhCC
Confidence 7788888888888888888888876667788888888888888888643322 122234566666777777666666543
No 307
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.5e-28 Score=273.29 Aligned_cols=249 Identities=24% Similarity=0.300 Sum_probs=180.1
Q ss_pred ccccchhhhhhccCcccCCCCChhhhccCccccccccccccc-ccCccccc-------ccccchhhhccccCCCCCCCCC
Q 043053 309 IGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLT-ASVPAGLF-------QLQNLTKLLLISNDISGSIPPE 380 (1058)
Q Consensus 309 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~ 380 (1058)
++..++|+.|++++|.+ .+|..+... |+.|+|++|.+. ..+|..+. .+++|++|+|++|++++..|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 34444555555555555 344444433 677777777773 23444443 5677777888888877777776
Q ss_pred c--cCCCCCcEEEccCccccCCccccccCc-----cccceeeccCccCCCCCCCcccCCcccchhhccCCccCCC--Ccc
Q 043053 381 I--GNCSSLVRLRVGNNRIAGLIPREIGGL-----KTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGS--LPN 451 (1058)
Q Consensus 381 ~--~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~--~~~ 451 (1058)
+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|+.+++|+.|+|++|++.+. .+.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 5 7788888888888888877 7777776 7888888888888877778888888888888888887653 233
Q ss_pred cc--ccCCCCCeeecCCCccccC--Cc-ccccccccccccccccccCCCCCC-CcccCCcccccccccCCcccCCCChhh
Q 043053 452 SL--SSLSGLQVLDVSDNRFSGQ--IP-ASLGRLVSLNKIILSKNLFSGPIP-SSLGLCSSLQLLDLSSNQLTGSVPMEL 525 (1058)
Q Consensus 452 ~~--~~l~~L~~L~L~~N~l~~~--~~-~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~ 525 (1058)
.+ ..+++|++|+|++|+|++. ++ ..+..+++|+.|+|++|++++..| ..+..+++|+.|++++|+|+ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 34 7888888888888888731 12 334567888888888888887664 45667788899999988887 555432
Q ss_pred hhhHHHHHHHhhccCCCCCCCCccccccccccEEecCCCcccCCCCcccccCcceeEEEecccccc
Q 043053 526 GQIEALEIALNLSCNGLTGPIPAQISALNKLSILDLSHNKLEGNLNPLAQLDNLVSLNISYNKFTG 591 (1058)
Q Consensus 526 ~~l~~l~~~l~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~ 591 (1058)
. ++|+.|||++|+|++.+. +..+++|+.|++++|+|++
T Consensus 273 -------------------------~--~~L~~L~Ls~N~l~~~p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 273 -------------------------P--AKLSVLDLSYNRLDRNPS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp -------------------------C--SEEEEEECCSSCCCSCCC-TTTSCEEEEEECTTCTTTC
T ss_pred -------------------------c--CCceEEECCCCCCCCChh-HhhCCCCCEEeccCCCCCC
Confidence 2 678888888888888744 7888888888888888875
No 308
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=1.3e-27 Score=267.22 Aligned_cols=237 Identities=22% Similarity=0.270 Sum_probs=204.5
Q ss_pred CCCCCcEEEccCCcCCCCCCCCCCCCCcccEEecCCCCCCCCCChhhcCcccCCEEeccccCCCCccccccccchhhhHH
Q 043053 22 SFKHLQTLVISDANLTGSIPFDIGDCVGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNSNQLTGKIPVELSNCKSLRKL 101 (1058)
Q Consensus 22 ~~~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L 101 (1058)
....+++|+|++|+++ .+|..++.+++|++|+|++|.++ .+|..++++++|++|+|++|++. .+|..++++++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 3478899999999988 78888888999999999999998 89988999999999999999988 788889999999999
Q ss_pred hhhhccccCCChhhhcccccchhhhcCCCccccCCCCccccCCCCCceecccCccccccCCccccCCCccceeeeecccc
Q 043053 102 LLFDNALAGNIPAELGRLSNLEEMRAGGNKDIVGKIPAELGDCSNMTALGLADTQVSGSLPASLGKLSKLQTLSIYTTMI 181 (1058)
Q Consensus 102 ~L~~n~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~i 181 (1058)
++++|.+.+.+|..++.. .++..++.+++|++|++++|+++ .+|..++++++|++|++++|.+
T Consensus 156 ~L~~n~~~~~~p~~~~~~----------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l 218 (328)
T 4fcg_A 156 SIRACPELTELPEPLAST----------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPL 218 (328)
T ss_dssp EEEEETTCCCCCSCSEEE----------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCC
T ss_pred ECCCCCCccccChhHhhc----------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCC
Confidence 999988887888766542 12234667888999999999888 8888899999999999999998
Q ss_pred ccccCccccCCCCccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCcCCccc
Q 043053 182 SGEIPAEIGNCSELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSI 261 (1058)
Q Consensus 182 ~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~ 261 (1058)
. .+|..++.+++|++|+|++|.+.+.+|..|+.+++|++|+|++|.+.+.+|..+..+++|++|+|++|.+.+.+|..+
T Consensus 219 ~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l 297 (328)
T 4fcg_A 219 S-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLI 297 (328)
T ss_dssp C-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGG
T ss_pred C-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHH
Confidence 8 466678899999999999999888899999999999999999998888889889999999999999999988999999
Q ss_pred cccCCcceeecccCccCC
Q 043053 262 GGLSELEEFMISDNNVSG 279 (1058)
Q Consensus 262 ~~l~~L~~L~l~~n~l~~ 279 (1058)
+.+++|+.+++..+.+..
T Consensus 298 ~~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 298 AQLPANCIILVPPHLQAQ 315 (328)
T ss_dssp GGSCTTCEEECCGGGSCC
T ss_pred hhccCceEEeCCHHHHHH
Confidence 999999999988876653
No 309
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=8.7e-28 Score=263.69 Aligned_cols=248 Identities=23% Similarity=0.248 Sum_probs=164.9
Q ss_pred hhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccC-CCCCCCCCccCCCCCcEEEc
Q 043053 314 KLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISND-ISGSIPPEIGNCSSLVRLRV 392 (1058)
Q Consensus 314 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L 392 (1058)
+|++|++++|++++..+..|..+++|++|++++|.+++..+..+..+++|++|++++|. +....+..|..+++|++|++
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 33444444444444444455556666666666666665555566666666666666665 55555667777777777777
Q ss_pred cCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccC
Q 043053 393 GNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQ 472 (1058)
Q Consensus 393 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 472 (1058)
++|++++..+..|..+++|++|++++|++++..+..|..+++|+.|+|++|++++..+..|..+++|++|++++|++++.
T Consensus 113 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 192 (285)
T 1ozn_A 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHV 192 (285)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccccc
Confidence 77777777777777777777777777777766666677777788888888877766666677788888888888888777
Q ss_pred CcccccccccccccccccccCCCCCCCcccCCcccccccccCCcccCCCChhhhhhHHHHHHHhhccCCCCCCCCccccc
Q 043053 473 IPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVPMELGQIEALEIALNLSCNGLTGPIPAQISA 552 (1058)
Q Consensus 473 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~ 552 (1058)
.|..|..+++|+.|+|++|++++..+..+..+++|+.|++++|++....+.. .-...+ ..+..+.|.+....|..+.+
T Consensus 193 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l-~~~~~~~~~~~c~~p~~l~g 270 (285)
T 1ozn_A 193 HPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWL-QKFRGSSSEVPCSLPQRLAG 270 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHH-HHCCSEECCCBEEESGGGTT
T ss_pred CHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHH-HhcccccCccccCCchHhCC
Confidence 7777888888888888888888766667788888888888888887544322 111222 23456666666666665543
Q ss_pred --cccccEEecCC
Q 043053 553 --LNKLSILDLSH 563 (1058)
Q Consensus 553 --l~~L~~L~L~~ 563 (1058)
+..++..++.+
T Consensus 271 ~~l~~l~~~~l~~ 283 (285)
T 1ozn_A 271 RDLKRLAANDLQG 283 (285)
T ss_dssp CBGGGSCGGGSCC
T ss_pred cChhhcCHHHhcc
Confidence 33344444433
No 310
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=1.7e-27 Score=279.51 Aligned_cols=229 Identities=23% Similarity=0.246 Sum_probs=175.5
Q ss_pred cchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhhhcc
Q 043053 290 NLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLI 369 (1058)
Q Consensus 290 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 369 (1058)
++++|+|++|+|+++.+..|..+++|++|++++|+|+++.+..|.++++|++|+|++|+++...+..|..+++|++|+|+
T Consensus 76 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 155 (452)
T 3zyi_A 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLR 155 (452)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECC
T ss_pred CccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECC
Confidence 34444444444444444445555555555555555555555566666777777777777775555556667777777777
Q ss_pred ccCCCCCCCCCccCCCCCcEEEccC-ccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCC
Q 043053 370 SNDISGSIPPEIGNCSSLVRLRVGN-NRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGS 448 (1058)
Q Consensus 370 ~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 448 (1058)
+|+|+...+..|.++++|+.|+|++ |.+..+.+..|.++++|++|+|++|++++. | .+..+++|+.|+|++|+|++.
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~ 233 (452)
T 3zyi_A 156 NNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEI 233 (452)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEE
T ss_pred CCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCccc
Confidence 7777766666788888888888888 566666666788899999999999998854 3 478889999999999999988
Q ss_pred CccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCcccCC
Q 043053 449 LPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGS 520 (1058)
Q Consensus 449 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 520 (1058)
.|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++...
T Consensus 234 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 234 RPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCD 305 (452)
T ss_dssp CGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECS
T ss_pred CcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCC
Confidence 889999999999999999999988888999999999999999999988888889999999999999998743
No 311
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=2.4e-27 Score=278.17 Aligned_cols=247 Identities=20% Similarity=0.241 Sum_probs=124.0
Q ss_pred ccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCcCCccccccCCcceeeccc
Q 043053 195 LVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMISD 274 (1058)
Q Consensus 195 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~ 274 (1058)
...++.+++.++ .+|..+. ++|+.|+|++|.+.+..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 345555555555 4454333 4556666666666555555555556666666666655555555555555555555555
Q ss_pred CccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCccccccccc-ccccccC
Q 043053 275 NNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSH-NSLTASV 353 (1058)
Q Consensus 275 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~ 353 (1058)
|.++...+..|..+++|++|+|++|+|+.+ .+..|..+++|+.|++++ |.+....
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~------------------------~~~~~~~l~~L~~L~l~~~~~l~~i~ 188 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESI------------------------PSYAFNRVPSLMRLDLGELKKLEYIS 188 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEE------------------------CTTTTTTCTTCCEEECCCCTTCCEEC
T ss_pred CcCCccChhhhcccCCCCEEECCCCCccee------------------------CHhHHhcCCcccEEeCCCCCCccccC
Confidence 555544444444444444444444444433 333444455555555555 2232222
Q ss_pred cccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCc
Q 043053 354 PAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCT 433 (1058)
Q Consensus 354 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 433 (1058)
+..|..+++|++|+|++|++++. | .+..+++|+.|+|++|+|+++.|..|.++++|++|+|++|++++..+..|..++
T Consensus 189 ~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 266 (452)
T 3zyi_A 189 EGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLA 266 (452)
T ss_dssp TTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred hhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCC
Confidence 22233344444444444444422 1 244455555555555555555555555555555555555555544455555555
Q ss_pred ccchhhccCCccCCCCccccccCCCCCeeecCCCccc
Q 043053 434 ELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFS 470 (1058)
Q Consensus 434 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 470 (1058)
+|+.|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 267 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 267 SLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp TCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred CCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 5555555555555444444444555555555555443
No 312
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=2.9e-27 Score=276.48 Aligned_cols=246 Identities=20% Similarity=0.255 Sum_probs=119.9
Q ss_pred ccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCcCCccccccCCcceeeccc
Q 043053 195 LVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMISD 274 (1058)
Q Consensus 195 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~ 274 (1058)
...++.+++.++ .+|..+. ++++.|+|++|++.+..+..|.++++|++|+|++|.+.+..+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 445666666665 4554443 4566666666666655555566666666666666666555555555555555555555
Q ss_pred CccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccccccccc-cccccC
Q 043053 275 NNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHN-SLTASV 353 (1058)
Q Consensus 275 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~ 353 (1058)
|+++...+..|..+++|++|+|++|+|+.+ .+..|..+++|+.|++++| .+....
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~------------------------~~~~~~~l~~L~~L~l~~~~~l~~i~ 177 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESI------------------------PSYAFNRIPSLRRLDLGELKRLSYIS 177 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEE------------------------CTTTTTTCTTCCEEECCCCTTCCEEC
T ss_pred CcCCeeCHhHhhccccCceeeCCCCccccc------------------------CHHHhhhCcccCEeCCCCCCCcceeC
Confidence 555544444455555555555555544433 3334444455555555542 222212
Q ss_pred cccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCc
Q 043053 354 PAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCT 433 (1058)
Q Consensus 354 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 433 (1058)
+..|..+++|++|+|++|+++. +| .+..+++|+.|+|++|+|+++.|..|.++++|++|+|++|+|++..+..|..++
T Consensus 178 ~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 255 (440)
T 3zyj_A 178 EGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQ 255 (440)
T ss_dssp TTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCT
T ss_pred cchhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCC
Confidence 2223333333333333333331 11 234444455555555555444444444455555555555544444444444444
Q ss_pred ccchhhccCCccCCCCccccccCCCCCeeecCCCcc
Q 043053 434 ELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRF 469 (1058)
Q Consensus 434 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 469 (1058)
+|+.|+|++|+|+++.+..|..+++|+.|+|++|.+
T Consensus 256 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 291 (440)
T 3zyj_A 256 SLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 291 (440)
T ss_dssp TCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCE
T ss_pred CCCEEECCCCCCCccChhHhccccCCCEEEcCCCCc
Confidence 444444444444444444444444444444444444
No 313
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=3.7e-27 Score=275.58 Aligned_cols=248 Identities=22% Similarity=0.233 Sum_probs=205.7
Q ss_pred ccceeeeeccccccccCccccCCCCccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEee
Q 043053 170 KLQTLSIYTTMISGEIPAEIGNCSELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFS 249 (1058)
Q Consensus 170 ~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~ 249 (1058)
..+.++..+..++ .+|..+. ++++.|+|++|.+++..+..|.++++|++|+|++|.+.+..+..|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 4567777777776 6777665 689999999999998888999999999999999999998888899999999999999
Q ss_pred cCCCcCcCCccccccCCcceeecccCccCCCccccccccccchhhhhcCC-cccCcCCCcccccchhhhhhccCcccCCC
Q 043053 250 LNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTN-QISGLIPPEIGMLSKLTVFFAWQNQLEGS 328 (1058)
Q Consensus 250 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N-~i~~~~~~~~~~l~~L~~L~l~~N~l~~~ 328 (1058)
+|+++...+..|..+++|++|++++|.+....+..|..+++|++|+|++| .+..+.
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~----------------------- 177 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYIS----------------------- 177 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEEC-----------------------
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeC-----------------------
Confidence 99999877788999999999999999999888888999999999999884 444333
Q ss_pred CChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCc
Q 043053 329 IPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGL 408 (1058)
Q Consensus 329 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 408 (1058)
+..|.++++|++|+|++|+++. +| .+..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|+++.+..|.++
T Consensus 178 -~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 254 (440)
T 3zyj_A 178 -EGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNL 254 (440)
T ss_dssp -TTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTC
T ss_pred -cchhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCC
Confidence 3345566666666666666663 33 35667777777788887777777888888888888888888888888888888
Q ss_pred cccceeeccCccCCCCCCCcccCCcccchhhccCCccC
Q 043053 409 KTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQ 446 (1058)
Q Consensus 409 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 446 (1058)
++|++|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 255 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 255 QSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp TTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 88888888888888777778888888888888888875
No 314
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.94 E-value=4.9e-27 Score=262.43 Aligned_cols=237 Identities=25% Similarity=0.330 Sum_probs=203.5
Q ss_pred CCcccEEecCCCCCCCCCChhhcCcccCCEEeccccCCCCccccccccchhhhHHhhhhccccCCChhhhcccccchhhh
Q 043053 47 CVGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNSNQLTGKIPVELSNCKSLRKLLLFDNALAGNIPAELGRLSNLEEMR 126 (1058)
Q Consensus 47 l~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~ 126 (1058)
..++++|+|++|+++ .+|..++++++|++|+|++|++. .+|..++++++|++|+|++|.+. .+|..++++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 467889999999988 88888888999999999999888 88888888888888888888887 7777777777777777
Q ss_pred cCCCccccCCCCccccCCCCCceecccCccccccCCccccCCCccceeeeeccccccccCccccCCCCccEEEccCCcCC
Q 043053 127 AGGNKDIVGKIPAELGDCSNMTALGLADTQVSGSLPASLGKLSKLQTLSIYTTMISGEIPAEIGNCSELVSLFLYENSLS 206 (1058)
Q Consensus 127 l~~~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~ 206 (1058)
+++|. ..+.+|..++.. ..+..|.++++|++|++++|.++ .+|..++.+++|++|+|++|.++
T Consensus 157 L~~n~-~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~ 219 (328)
T 4fcg_A 157 IRACP-ELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS 219 (328)
T ss_dssp EEEET-TCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC
T ss_pred CCCCC-CccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC
Confidence 77654 234445443321 12334567999999999999998 88999999999999999999999
Q ss_pred CCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCcCCccccccCCcceeecccCccCCCcccccc
Q 043053 207 GSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLA 286 (1058)
Q Consensus 207 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 286 (1058)
.+|..++.+++|++|+|++|.+.+.+|..|..+++|++|+|++|.+.+.+|..++++++|++|++++|++.+.+|..+.
T Consensus 220 -~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~ 298 (328)
T 4fcg_A 220 -ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIA 298 (328)
T ss_dssp -CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGG
T ss_pred -cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHh
Confidence 4777899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhhcCCcccCc
Q 043053 287 NATNLVQLQLDTNQISGL 304 (1058)
Q Consensus 287 ~l~~L~~L~L~~N~i~~~ 304 (1058)
.+++|+.+++..|.+...
T Consensus 299 ~L~~L~~l~l~~~~~~~l 316 (328)
T 4fcg_A 299 QLPANCIILVPPHLQAQL 316 (328)
T ss_dssp GSCTTCEEECCGGGSCC-
T ss_pred hccCceEEeCCHHHHHHH
Confidence 999999999998877644
No 315
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=3.5e-28 Score=270.25 Aligned_cols=249 Identities=21% Similarity=0.216 Sum_probs=180.3
Q ss_pred ccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccC-CCCChhhh-------ccCcccccccccccccccCccc
Q 043053 285 LANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLE-GSIPSTLA-------SCSNLQALDLSHNSLTASVPAG 356 (1058)
Q Consensus 285 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~-------~l~~L~~L~Ls~N~l~~~~~~~ 356 (1058)
++..++|+.|++++|.+ ..|..+... |+.|++++|+++ ..++..+. .+++|++|+|++|++++..|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 44455566666666666 334433332 666666666663 23444443 5778888888888888777776
Q ss_pred c--cccccchhhhccccCCCCCCCCCccCC-----CCCcEEEccCccccCCccccccCccccceeeccCccCCCC--CCC
Q 043053 357 L--FQLQNLTKLLLISNDISGSIPPEIGNC-----SSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGS--VPD 427 (1058)
Q Consensus 357 ~--~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~~~ 427 (1058)
+ ..+++|++|+|++|++++. |..++.+ ++|++|+|++|+|+++.+..|+.+++|++|+|++|++.+. .+.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 6 6788888888888888866 7777766 7888888888888888878888888888888888887653 222
Q ss_pred cc--cCCcccchhhccCCccCC---CCccccccCCCCCeeecCCCccccCCc-ccccccccccccccccccCCCCCCCcc
Q 043053 428 EI--GDCTELQMIDLSHNTLQG---SLPNSLSSLSGLQVLDVSDNRFSGQIP-ASLGRLVSLNKIILSKNLFSGPIPSSL 501 (1058)
Q Consensus 428 ~~--~~l~~L~~L~l~~N~l~~---~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 501 (1058)
.+ ..+++|+.|+|++|+|++ .....+..+++|++|+|++|++++..| ..+..+++|+.|+|++|+|+ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 33 778888888888888873 222445677888888888888887665 45666788888888888888 566666
Q ss_pred cCCcccccccccCCcccCCCChhhhhhHHHHHHHhhccCCCCCCCCccccccccccEEecCCCcccC
Q 043053 502 GLCSSLQLLDLSSNQLTGSVPMELGQIEALEIALNLSCNGLTGPIPAQISALNKLSILDLSHNKLEG 568 (1058)
Q Consensus 502 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 568 (1058)
. ++|++|++++|+|++. | . +..+++|+.|+|++|++++
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p-------------------------~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-P-------------------------S-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-C-------------------------C-TTTSCEEEEEECTTCTTTC
T ss_pred c--CCceEEECCCCCCCCC-h-------------------------h-HhhCCCCCEEeccCCCCCC
Confidence 5 7888888888888742 2 2 4567888888888888875
No 316
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=1e-28 Score=275.30 Aligned_cols=180 Identities=19% Similarity=0.251 Sum_probs=107.3
Q ss_pred ccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCccc-CCcccchhh
Q 043053 361 QNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIG-DCTELQMID 439 (1058)
Q Consensus 361 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~ 439 (1058)
++|++|++++|++++..+.. +++|++|++++|+++++.+..|..+++|++|+|++|.+++..+..+. .+++|+.|+
T Consensus 99 ~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 175 (317)
T 3o53_A 99 PSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (317)
T ss_dssp TTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEE
Confidence 34444444444444332222 34566666666666666565666666666666666666655555443 556666666
Q ss_pred ccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCccc-
Q 043053 440 LSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLT- 518 (1058)
Q Consensus 440 l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~- 518 (1058)
|++|+|++. + ....+++|++|+|++|++++ +|..+..+++|+.|+|++|+|+ .+|..+..+++|+.|++++|+++
T Consensus 176 L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~ 251 (317)
T 3o53_A 176 LQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHC 251 (317)
T ss_dssp CTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBH
T ss_pred CCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccC
Confidence 666666643 2 22336667777777777763 3344666677777777777776 35566667777777777777776
Q ss_pred CCCChhhhhhHHHHHHHhhc-cCCCCCCCCc
Q 043053 519 GSVPMELGQIEALEIALNLS-CNGLTGPIPA 548 (1058)
Q Consensus 519 ~~~p~~~~~l~~l~~~l~ls-~N~l~~~~~~ 548 (1058)
+.+|.++..++.++. ++++ .+.+++..+.
T Consensus 252 ~~~~~~~~~~~~L~~-l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 252 GTLRDFFSKNQRVQT-VAKQTVKKLTGQNEE 281 (317)
T ss_dssp HHHHHHHHTCHHHHH-HHHHHHHHHHSSSSC
T ss_pred cCHHHHHhccccceE-EECCCchhccCCchh
Confidence 566666776666653 5555 4455554443
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=1.9e-28 Score=273.14 Aligned_cols=267 Identities=20% Similarity=0.194 Sum_probs=147.3
Q ss_pred ccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCcCCccccccCCcceeeccc
Q 043053 195 LVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMISD 274 (1058)
Q Consensus 195 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~ 274 (1058)
++.++++.+.+...+...+..+++|++|+|++|.+.+..+..|..+++|++|+|++|.+++..+ +..+++|++|++++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 3344445544442233334445566666666666665555556666666666666666654333 55555566666665
Q ss_pred CccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccccccccccccccCc
Q 043053 275 NNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVP 354 (1058)
Q Consensus 275 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 354 (1058)
|.+++.. ..++|++|++++|+|++..+. .+++|+.|++++|++++..+
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---------------------------~~~~L~~L~l~~N~l~~~~~ 137 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNISRVSCS---------------------------RGQGKKNIYLANNKITMLRD 137 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCSEEEEC---------------------------CCSSCEEEECCSSCCCSGGG
T ss_pred Ccccccc-----CCCCcCEEECCCCccCCcCcc---------------------------ccCCCCEEECCCCCCCCccc
Confidence 5554211 224455555555554433221 13445555555555554444
Q ss_pred ccccccccchhhhccccCCCCCCCCCc-cCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCc
Q 043053 355 AGLFQLQNLTKLLLISNDISGSIPPEI-GNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCT 433 (1058)
Q Consensus 355 ~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 433 (1058)
..+..+++|++|+|++|.+++..+..+ ..+++|++|+|++|.|+++. ....+++|++|+|++|++++. |..+..++
T Consensus 138 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~ 214 (317)
T 3o53_A 138 LDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAFM-GPEFQSAA 214 (317)
T ss_dssp BCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCEE-CGGGGGGT
T ss_pred hhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccc--cccccccCCEEECCCCcCCcc-hhhhcccC
Confidence 455555555555555555554444444 24566666666666666542 222366666666666666643 33366666
Q ss_pred ccchhhccCCccCCCCccccccCCCCCeeecCCCccc-cCCcccccccccccccccc-cccCCCCCCC
Q 043053 434 ELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFS-GQIPASLGRLVSLNKIILS-KNLFSGPIPS 499 (1058)
Q Consensus 434 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls-~N~l~~~~~~ 499 (1058)
+|+.|+|++|+|++ +|..+..+++|+.|++++|++. +.+|..+..++.|+.|+++ .+.+.+..|.
T Consensus 215 ~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 215 GVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp TCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred cccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 67777777776663 4556666677777777777766 5556666666667777666 3334444433
No 318
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=8.8e-26 Score=271.18 Aligned_cols=269 Identities=28% Similarity=0.316 Sum_probs=204.6
Q ss_pred CCccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCcCCccccccCCcceeec
Q 043053 193 SELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMI 272 (1058)
Q Consensus 193 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 272 (1058)
.+++.|++++|.++ .+|..+. ++|+.|+|++|.++ .+|. .+++|++|+|++|++++ +|. .+++|++|++
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEEC
Confidence 35899999999998 6777665 78999999999988 4454 56889999999999884 444 6788888888
Q ss_pred ccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCccccccccccccccc
Q 043053 273 SDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTAS 352 (1058)
Q Consensus 273 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 352 (1058)
++|.+++... .+++|+.|++++|+|+.+.+ .+++|++|+|++|++++
T Consensus 109 s~N~l~~l~~----~l~~L~~L~L~~N~l~~lp~----------------------------~l~~L~~L~Ls~N~l~~- 155 (622)
T 3g06_A 109 FSNPLTHLPA----LPSGLCKLWIFGNQLTSLPV----------------------------LPPGLQELSVSDNQLAS- 155 (622)
T ss_dssp CSCCCCCCCC----CCTTCCEEECCSSCCSCCCC----------------------------CCTTCCEEECCSSCCSC-
T ss_pred cCCcCCCCCC----CCCCcCEEECCCCCCCcCCC----------------------------CCCCCCEEECcCCcCCC-
Confidence 8888875333 45667777777777664321 12567777777777764
Q ss_pred CcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCC
Q 043053 353 VPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDC 432 (1058)
Q Consensus 353 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 432 (1058)
+|. ..++|+.|++++|.|++ +| ..+++|+.|++++|.|+++.+ .+++|+.|++++|.++. +|.. +
T Consensus 156 l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l~~----~~~~L~~L~L~~N~l~~-l~~~---~ 220 (622)
T 3g06_A 156 LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLASLPT----LPSELYKLWAYNNRLTS-LPAL---P 220 (622)
T ss_dssp CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSS-CCCC---C
T ss_pred cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCCCC----ccchhhEEECcCCcccc-cCCC---C
Confidence 343 23567777888888875 44 446788888898888886532 24788899999998884 4432 4
Q ss_pred cccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCcccccccc
Q 043053 433 TELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDL 512 (1058)
Q Consensus 433 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 512 (1058)
++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..|..+++|+.|+|
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 788999999999986 45 45688999999999998 4555 5678999999999998 67888999999999999
Q ss_pred cCCcccCCCChhhhhhH
Q 043053 513 SSNQLTGSVPMELGQIE 529 (1058)
Q Consensus 513 ~~N~l~~~~p~~~~~l~ 529 (1058)
++|++++.+|..+..+.
T Consensus 292 ~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 292 EGNPLSERTLQALREIT 308 (622)
T ss_dssp CSCCCCHHHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHhcc
Confidence 99999987777765544
No 319
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=1.3e-25 Score=269.67 Aligned_cols=266 Identities=30% Similarity=0.389 Sum_probs=136.6
Q ss_pred CCceecccCccccccCCccccCCCccceeeeeccccccccCccccCCCCccEEEccCCcCCCCCCCCcCCCCCcceeecc
Q 043053 146 NMTALGLADTQVSGSLPASLGKLSKLQTLSIYTTMISGEIPAEIGNCSELVSLFLYENSLSGSIPPEIGKLKKLEELFLW 225 (1058)
Q Consensus 146 ~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 225 (1058)
+++.|++++|.++ .+|..+. ++|+.|++++|.++ .+|. .+++|++|+|++|.++ .+|. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECc
Confidence 4566666666665 5555544 45666666666555 3333 3455666666666555 3333 44555555555
Q ss_pred cccccCCCCccccCcCCccEEEeecCCCcCcCCccccccCCcceeecccCccCCCccccccccccchhhhhcCCcccCcC
Q 043053 226 QNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLI 305 (1058)
Q Consensus 226 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~ 305 (1058)
+|.+.+. |. .+++|+.|++++|++++ +|.. +++|++|+ |++|+|+++
T Consensus 110 ~N~l~~l-~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~------------------------Ls~N~l~~l- 156 (622)
T 3g06_A 110 SNPLTHL-PA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELS------------------------VSDNQLASL- 156 (622)
T ss_dssp SCCCCCC-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEE------------------------CCSSCCSCC-
T ss_pred CCcCCCC-CC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEE------------------------CcCCcCCCc-
Confidence 5555532 22 34455555555555543 2221 24444444 444444432
Q ss_pred CCcccccchhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCC
Q 043053 306 PPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCS 385 (1058)
Q Consensus 306 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 385 (1058)
|. .+++|+.|++++|+++++ | ..+++|+.|++++|+|++ +|.. .++|+.|++++|.++. +|.. ++
T Consensus 157 ~~---~~~~L~~L~L~~N~l~~l-~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~~ 221 (622)
T 3g06_A 157 PA---LPSELCKLWAYNNQLTSL-P---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PS 221 (622)
T ss_dssp CC---CCTTCCEEECCSSCCSCC-C---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCCC---CT
T ss_pred CC---ccCCCCEEECCCCCCCCC-c---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCCC---CC
Confidence 11 122333344444444432 2 234556666666666663 3322 2455555666665553 2221 25
Q ss_pred CCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecC
Q 043053 386 SLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVS 465 (1058)
Q Consensus 386 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~ 465 (1058)
+|+.|+|++|.|+++ | ..+++|++|+|++|+|++ +|. .+++|+.|+|++|+|+ .+|..|.++++|+.|+|+
T Consensus 222 ~L~~L~Ls~N~L~~l-p---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 222 GLKELIVSGNRLTSL-P---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TCCEEECCSSCCSCC-C---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCEEEccCCccCcC-C---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 566666666666653 2 334566666666666653 332 3455666666666666 345556666666666666
Q ss_pred CCccccCCcccccc
Q 043053 466 DNRFSGQIPASLGR 479 (1058)
Q Consensus 466 ~N~l~~~~~~~~~~ 479 (1058)
+|++++..|..+..
T Consensus 293 ~N~l~~~~~~~l~~ 306 (622)
T 3g06_A 293 GNPLSERTLQALRE 306 (622)
T ss_dssp SCCCCHHHHHHHHH
T ss_pred CCCCCCcCHHHHHh
Confidence 66666555544443
No 320
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=1.5e-26 Score=274.70 Aligned_cols=195 Identities=14% Similarity=0.163 Sum_probs=149.5
Q ss_pred ccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEEcCCC
Q 043053 706 LVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNRNN 785 (1058)
Q Consensus 706 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 785 (1058)
+...++||+|+||+||+|... ++.+|+|+......... ........+++.+|++++++++||||+++..++...+.
T Consensus 338 ~~~~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~---~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~ 413 (540)
T 3en9_A 338 KIPEHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDE---RLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDN 413 (540)
T ss_dssp ----------CCEEEEEEECS-SCEEEEEEECCCTTSCH---HHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTT
T ss_pred CCCCCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccch---hhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCc
Confidence 355779999999999999544 78899998744321100 00112235678999999999999999977777777888
Q ss_pred ceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccccee
Q 043053 786 RLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKL 865 (1058)
Q Consensus 786 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~~~ 865 (1058)
.|+||||++||+|.++++. +..++.|+++||+|||++ +|+||||||+|||++. .+||+|||+++.
T Consensus 414 ~~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~ 478 (540)
T 3en9_A 414 KRIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKI 478 (540)
T ss_dssp TEEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEE
T ss_pred cEEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEE
Confidence 8999999999999999975 458999999999999999 9999999999999998 999999999998
Q ss_pred ccCCCccc-----ccccccCcCCccCcccccc--CCCCcccchhhHHHHHHHHHhCCCCCC
Q 043053 866 VDDGDFAR-----SSNTVAGSYGYIAPEYGYM--MKITEKSDVYSYGVVVLEVLTGKQPID 919 (1058)
Q Consensus 866 ~~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvvl~elltg~~P~~ 919 (1058)
........ ......||+.|||||++.. ..|+..+|+|+..+-..+-+.++.+|.
T Consensus 479 ~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 479 SNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 75532111 1235679999999999876 567888999999999998888877763
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=1.3e-26 Score=273.16 Aligned_cols=149 Identities=21% Similarity=0.188 Sum_probs=72.0
Q ss_pred ccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCcccccc-CccccceeeccCccCCCCCCCcccCCcccchhh
Q 043053 361 QNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIG-GLKTLNFLDLSSNRLSGSVPDEIGDCTELQMID 439 (1058)
Q Consensus 361 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 439 (1058)
++|+.|+|++|.+++..|..|+.+++|+.|+|++|.|++..|..|. .+++|++|+|++|.|++..+ +..+++|+.|+
T Consensus 120 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~ 197 (487)
T 3oja_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLD 197 (487)
T ss_dssp SSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEE
T ss_pred CCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEE
Confidence 3344444444444444444444445555555555555544444443 44555555555555543321 22345555555
Q ss_pred ccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCC-CCCCCcccCCccccccccc
Q 043053 440 LSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFS-GPIPSSLGLCSSLQLLDLS 513 (1058)
Q Consensus 440 l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~l~ 513 (1058)
|++|.|+++ |..|..+++|+.|+|++|.|++ +|..+..+++|+.|+|++|++. +.+|..+..++.|+.|+++
T Consensus 198 Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 198 LSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 555555542 2235555555555555555552 4444555555555555555554 3344445555555555554
No 322
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=1.6e-29 Score=308.45 Aligned_cols=432 Identities=14% Similarity=0.143 Sum_probs=236.8
Q ss_pred cccCCCCCcEEEccCCcCCCC---CCCC------------CCCCCcccEEecCCCCCCCCCChhhc-CcccCCEEecccc
Q 043053 19 NLSSFKHLQTLVISDANLTGS---IPFD------------IGDCVGLIVLDFSSNNLVGTLPSSLG-KLHNLEELILNSN 82 (1058)
Q Consensus 19 ~~~~~~~L~~L~l~~~~~~~~---~p~~------------l~~l~~L~~L~l~~~~i~~~lp~~l~-~l~~L~~L~L~~n 82 (1058)
.+.++++|++|+++++..... .|.. ...+++|++|+|++|.+++..+..+. .+++|++|+|++|
T Consensus 61 ~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~ 140 (594)
T 2p1m_B 61 VIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSC 140 (594)
T ss_dssp HHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCc
Confidence 456778888888888753211 1211 13467788888888887766666665 6788888888888
Q ss_pred -CCCCc-cccccccchhhhHHhhhhccccCCChhhhc----ccccchhhhcCCCc-ccc-CCCCccccCCCCCceecccC
Q 043053 83 -QLTGK-IPVELSNCKSLRKLLLFDNALAGNIPAELG----RLSNLEEMRAGGNK-DIV-GKIPAELGDCSNMTALGLAD 154 (1058)
Q Consensus 83 -~~~~~-~p~~l~~l~~L~~L~L~~n~~~~~~p~~l~----~l~~L~~L~l~~~~-~~~-~~l~~~l~~l~~L~~L~l~~ 154 (1058)
.+... ++..+.++++|++|+|++|.+.+..+..+. .+++|++|++++|. .+. ..+...+..+++|++|++++
T Consensus 141 ~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~ 220 (594)
T 2p1m_B 141 EGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNR 220 (594)
T ss_dssp EEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCT
T ss_pred CCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCC
Confidence 44422 444455778888888888776654444333 45577777777664 010 01111123456777777776
Q ss_pred ccccccCCccccCCCccceeeeecc-------ccccccCccccCCCCccEE-EccCCcCCCCCCCCcCCCCCcceeeccc
Q 043053 155 TQVSGSLPASLGKLSKLQTLSIYTT-------MISGEIPAEIGNCSELVSL-FLYENSLSGSIPPEIGKLKKLEELFLWQ 226 (1058)
Q Consensus 155 ~~~~~~~~~~l~~l~~L~~L~l~~n-------~i~~~~~~~l~~l~~L~~L-~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 226 (1058)
|...+.++..+.++++|+.|++..+ .+. .++..+.++++|+.| .+.+... +.++..+..+++|++|+|++
T Consensus 221 ~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~-~l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~ 298 (594)
T 2p1m_B 221 AVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYS-GLSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSY 298 (594)
T ss_dssp TSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHH-HHHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTT
T ss_pred CCcHHHHHHHHhcCCcceEcccccccCccchhhHH-HHHHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccC
Confidence 6222235556666666777664333 222 233355666666666 2332221 12333334556666666666
Q ss_pred ccccCCCCc-cccCcCCccEEEeecCCCcCcCCc-cccccCCcceeecccCccCCCccccccccccchhhhhcCCcccCc
Q 043053 227 NSLVGAIPE-EIGNCTSLKMIDFSLNSLSGTIPL-SIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGL 304 (1058)
Q Consensus 227 n~l~~~~~~-~l~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~ 304 (1058)
|.+.+.... .+..+++|++|++++| +...... ....+++|++|+++++.-.+ ..+.+.+++.
T Consensus 299 ~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g---------------~~~~~~l~~~ 362 (594)
T 2p1m_B 299 ATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFV---------------MEPNVALTEQ 362 (594)
T ss_dssp CCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTC---------------SSCSSCCCHH
T ss_pred CCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccc---------------cccCCCCCHH
Confidence 664422111 2345666666666665 3321111 12235666666663321000 0011222222
Q ss_pred CCCccc-ccchhhhhhccCcccCCCCChhhh-ccCcccccccc--c----cccccc-----Ccccccccccchhhhcccc
Q 043053 305 IPPEIG-MLSKLTVFFAWQNQLEGSIPSTLA-SCSNLQALDLS--H----NSLTAS-----VPAGLFQLQNLTKLLLISN 371 (1058)
Q Consensus 305 ~~~~~~-~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~Ls--~----N~l~~~-----~~~~~~~l~~L~~L~L~~N 371 (1058)
....+. .+++|+.|.+..|++++.....+. .+++|+.|+++ + |.+++. ++..+..+++|++|+|++
T Consensus 363 ~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~- 441 (594)
T 2p1m_B 363 GLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG- 441 (594)
T ss_dssp HHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-
T ss_pred HHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-
Confidence 111121 244455555555555444333443 46667777776 3 344421 111234566777777765
Q ss_pred CCCCCCCCCccC-CCCCcEEEccCccccCCccccc-cCccccceeeccCccCCCCCCC-cccCCcccchhhccCCccCCC
Q 043053 372 DISGSIPPEIGN-CSSLVRLRVGNNRIAGLIPREI-GGLKTLNFLDLSSNRLSGSVPD-EIGDCTELQMIDLSHNTLQGS 448 (1058)
Q Consensus 372 ~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~l~~N~l~~~ 448 (1058)
.+++..+..+.. +++|+.|+|++|.+++.....+ .++++|++|+|++|.+++.... .+..+++|+.|++++|+++..
T Consensus 442 ~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~ 521 (594)
T 2p1m_B 442 LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFG 521 (594)
T ss_dssp SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHH
T ss_pred cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHH
Confidence 554433334443 6778888888888765544444 5678888888888888543322 334578888888888887543
Q ss_pred Ccccc-ccCCCCCeeecCCCcc
Q 043053 449 LPNSL-SSLSGLQVLDVSDNRF 469 (1058)
Q Consensus 449 ~~~~~-~~l~~L~~L~L~~N~l 469 (1058)
....+ ..+++|+...+..+.-
T Consensus 522 ~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 522 ACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp HHHHHHHHCTTEEEEEECSSSC
T ss_pred HHHHHHHhCCCCEEEEecCCCc
Confidence 33334 5567777777766643
No 323
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=2.2e-29 Score=307.22 Aligned_cols=131 Identities=16% Similarity=0.145 Sum_probs=58.3
Q ss_pred CcccCCEEeccccCCCCccccccc-cchhhhHHhhhhc-cccCC-ChhhhcccccchhhhcCCCccccCCCCcc----cc
Q 043053 70 KLHNLEELILNSNQLTGKIPVELS-NCKSLRKLLLFDN-ALAGN-IPAELGRLSNLEEMRAGGNKDIVGKIPAE----LG 142 (1058)
Q Consensus 70 ~l~~L~~L~L~~n~~~~~~p~~l~-~l~~L~~L~L~~n-~~~~~-~p~~l~~l~~L~~L~l~~~~~~~~~l~~~----l~ 142 (1058)
.+++|++|+|++|.+.+..+..+. .+++|++|+|++| .+... ++..+.++++|++|++++|. +.+..+.. ..
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~-i~~~~~~~l~~~~~ 181 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESD-VDDVSGHWLSHFPD 181 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCE-EECCCGGGGGGSCT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCc-cCCcchHHHHHHhh
Confidence 455666666666665544444443 4566666666655 33211 23333355555555555554 22222111 12
Q ss_pred CCCCCceecccCcc--cccc-CCccccCCCccceeeeeccccccccCccccCCCCccEEEcc
Q 043053 143 DCSNMTALGLADTQ--VSGS-LPASLGKLSKLQTLSIYTTMISGEIPAEIGNCSELVSLFLY 201 (1058)
Q Consensus 143 ~l~~L~~L~l~~~~--~~~~-~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~ 201 (1058)
.+++|++|++++|. +... +...+.++++|++|++++|...+.++..+..+++|+.|+++
T Consensus 182 ~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~ 243 (594)
T 2p1m_B 182 TYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTG 243 (594)
T ss_dssp TCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECS
T ss_pred cCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccc
Confidence 34455555555543 1111 11111234455555555442111244444444555555443
No 324
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=1.1e-26 Score=274.03 Aligned_cols=193 Identities=21% Similarity=0.246 Sum_probs=155.9
Q ss_pred hhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccc
Q 043053 333 LASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLN 412 (1058)
Q Consensus 333 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 412 (1058)
|..+++|++|+|++|.|++.. ..++|++|++++|.|++..+. .+++|+.|+|++|.|++..|..|+.+++|+
T Consensus 76 l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 147 (487)
T 3oja_A 76 LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQ 147 (487)
T ss_dssp CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEE
T ss_pred cccCCCCCEEEecCCcCCCCC-----CCCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCC
Confidence 455566666666666666422 126677777777777755443 357899999999999999999999999999
Q ss_pred eeeccCccCCCCCCCccc-CCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccc
Q 043053 413 FLDLSSNRLSGSVPDEIG-DCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKN 491 (1058)
Q Consensus 413 ~L~Ls~N~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 491 (1058)
+|+|++|.+++..|..+. .+++|+.|+|++|.|++..+ +..+++|+.|+|++|+|++. |..+..+++|+.|+|++|
T Consensus 148 ~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N 224 (487)
T 3oja_A 148 YLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNN 224 (487)
T ss_dssp EEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTS
T ss_pred EEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCC
Confidence 999999999988888886 79999999999999997533 44689999999999999964 445889999999999999
Q ss_pred cCCCCCCCcccCCcccccccccCCccc-CCCChhhhhhHHHHHHHhhc
Q 043053 492 LFSGPIPSSLGLCSSLQLLDLSSNQLT-GSVPMELGQIEALEIALNLS 538 (1058)
Q Consensus 492 ~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~p~~~~~l~~l~~~l~ls 538 (1058)
.|++ +|..+..+++|+.|++++|++. +.+|.++..+..+.. ++++
T Consensus 225 ~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~-l~~~ 270 (487)
T 3oja_A 225 KLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQT-VAKQ 270 (487)
T ss_dssp CCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHH-HHHH
T ss_pred cCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcE-Eecc
Confidence 9995 6778999999999999999998 677888888877763 5554
No 325
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=2.3e-24 Score=234.29 Aligned_cols=209 Identities=21% Similarity=0.245 Sum_probs=130.6
Q ss_pred hhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccc
Q 043053 333 LASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLN 412 (1058)
Q Consensus 333 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 412 (1058)
+..+++|+.|++++|.+.. + ..+..+++|++|++++|.+++. ..+..+++|++|+|++|.++++.+..|..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 4455566666666666552 2 2355566666666666666542 3566666666666666666666666666666666
Q ss_pred eeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCccccccccccccccccccc
Q 043053 413 FLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNL 492 (1058)
Q Consensus 413 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 492 (1058)
+|+|++|++++..+..|..+++|+.|++++|++++..+..|..+++|+.|++++|++++..+..|..+++|+.|+|++|+
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 66666666666666666666666666666666666555566666677777777776665555556666677777777777
Q ss_pred CCCCCCCcccCCcccccccccCCcccCCCChhhhhhHHHHHHHhhccCCCCCCCCcccccc
Q 043053 493 FSGPIPSSLGLCSSLQLLDLSSNQLTGSVPMELGQIEALEIALNLSCNGLTGPIPAQISAL 553 (1058)
Q Consensus 493 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l 553 (1058)
+++..+..|..+++|+.|++++|++.+..|. + ..++++.|.++|.+|.+++.+
T Consensus 193 l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~-------l-~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 193 LKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG-------I-RYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCCTTT-------T-HHHHHHHHHTGGGBBCTTSCB
T ss_pred CCccCHHHHhCCcCCCEEEccCCCccccCcH-------H-HHHHHHHHhCCCcccCccccc
Confidence 7666666666677777777777766654442 1 134555566666655555443
No 326
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=8.2e-25 Score=237.86 Aligned_cols=230 Identities=22% Similarity=0.299 Sum_probs=192.1
Q ss_pred cccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhhh
Q 043053 288 ATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLL 367 (1058)
Q Consensus 288 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 367 (1058)
+..+..+++..+.+... ..+..+++|+.|++.+|.++.. ..+..+++|++|++++|.+++ + ..+..+++|++|+
T Consensus 18 ~~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~ 91 (272)
T 3rfs_A 18 FAETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLI 91 (272)
T ss_dssp HHHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEE
T ss_pred HHHHHHHHhcCcccccc--cccccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEE
Confidence 44566777777776654 3456677778888888877743 357888899999999999885 3 4677888999999
Q ss_pred ccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCC
Q 043053 368 LISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQG 447 (1058)
Q Consensus 368 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 447 (1058)
+++|.+++..+..|.++++|++|+|++|+++++.+..|..+++|++|+|++|++++..+..|..+++|+.|++++|++++
T Consensus 92 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 92 LTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS 171 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc
Confidence 99999998888788999999999999999998888888999999999999999998888888899999999999999998
Q ss_pred CCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCcccCCCChhhhh
Q 043053 448 SLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVPMELGQ 527 (1058)
Q Consensus 448 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 527 (1058)
..+..|..+++|++|++++|++++..+..|..+++|+.|+|++|++.+. +++|+.|++..|.++|.+|.+++.
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~ 244 (272)
T 3rfs_A 172 LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGS 244 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSC
T ss_pred cCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccc
Confidence 8888889999999999999999988777888999999999999988753 557899999999999999988876
Q ss_pred hHH
Q 043053 528 IEA 530 (1058)
Q Consensus 528 l~~ 530 (1058)
+..
T Consensus 245 ~~~ 247 (272)
T 3rfs_A 245 VAP 247 (272)
T ss_dssp BCG
T ss_pred cCC
Confidence 654
No 327
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=1.5e-24 Score=236.64 Aligned_cols=208 Identities=26% Similarity=0.273 Sum_probs=159.0
Q ss_pred hhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEcc
Q 043053 314 KLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVG 393 (1058)
Q Consensus 314 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 393 (1058)
+|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|+|++|.+++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 34444444555544444556666667777777777765555566667777777777777776666778888888888888
Q ss_pred CccccCCccccccCccccceeeccCccCCCC-CCCcccCCcccchhhccCCccCCCCccccccCCCCC----eeecCCCc
Q 043053 394 NNRIAGLIPREIGGLKTLNFLDLSSNRLSGS-VPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQ----VLDVSDNR 468 (1058)
Q Consensus 394 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~----~L~L~~N~ 468 (1058)
+|+++++.+..|..+++|++|++++|++++. +|..|..+++|+.|++++|++++..+..|..+.+|+ .|++++|+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 8888877777788888888888888888764 478888888888888888888877777787777777 88999999
Q ss_pred cccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCcccCCCC
Q 043053 469 FSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVP 522 (1058)
Q Consensus 469 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 522 (1058)
+++..+..+.. .+|+.|+|++|++++..+..|..+++|+.|++++|++++..|
T Consensus 189 l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 189 MNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred ccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 98655555544 489999999999998777788999999999999999987654
No 328
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.90 E-value=2e-24 Score=235.66 Aligned_cols=203 Identities=20% Similarity=0.218 Sum_probs=84.7
Q ss_pred cceeecccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCccccccccc
Q 043053 267 LEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSH 346 (1058)
Q Consensus 267 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 346 (1058)
|++|++++|.+++..+..|..+++|++|+|++|+++++.+..|..+++|++|++++|++++..+..|..+++|++|++++
T Consensus 30 l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~ 109 (276)
T 2z62_A 30 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVE 109 (276)
T ss_dssp CCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred ccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCC
Confidence 33333333333333333333333333344434333333333333333333333333333333333444444444455544
Q ss_pred ccccccCcccccccccchhhhccccCCCCC-CCCCccCCCCCcEEEccCccccCCccccccCccccc----eeeccCccC
Q 043053 347 NSLTASVPAGLFQLQNLTKLLLISNDISGS-IPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLN----FLDLSSNRL 421 (1058)
Q Consensus 347 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L~Ls~N~l 421 (1058)
|++.+..+..+..+++|++|++++|.+++. +|..|.++++|++|+|++|+++++.+..|..+++|+ +|++++|++
T Consensus 110 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l 189 (276)
T 2z62_A 110 TNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPM 189 (276)
T ss_dssp SCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCC
T ss_pred CCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcc
Confidence 444433333344444444444444444432 244444445555555555555444444444444444 444444444
Q ss_pred CCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccc
Q 043053 422 SGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFS 470 (1058)
Q Consensus 422 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 470 (1058)
++..+..+.. .+|+.|++++|++++..+..|..+++|+.|++++|+++
T Consensus 190 ~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 190 NFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp CEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred cccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 4333333222 24444444444444433333444444444444444443
No 329
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=2.3e-23 Score=226.30 Aligned_cols=179 Identities=24% Similarity=0.291 Sum_probs=130.7
Q ss_pred cccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeecc
Q 043053 338 NLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLS 417 (1058)
Q Consensus 338 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 417 (1058)
+.+.+++++|+++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+|+.+.+..|..+++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4566777777777 3555443 567777777777776666677777777777777777777766667777777777777
Q ss_pred CccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCC
Q 043053 418 SNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPI 497 (1058)
Q Consensus 418 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 497 (1058)
+|++++..+..|..+++|+.|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 77777666667777777777777777777766677777777777777777777655566777777777777777777766
Q ss_pred CCcccCCcccccccccCCcccC
Q 043053 498 PSSLGLCSSLQLLDLSSNQLTG 519 (1058)
Q Consensus 498 ~~~~~~l~~L~~L~l~~N~l~~ 519 (1058)
+..|..+++|+.|++++|++++
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~ 195 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKR 195 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSC
T ss_pred hhHhccCCCcCEEECCCCcCCc
Confidence 6677777777777777777763
No 330
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=1.7e-23 Score=227.25 Aligned_cols=203 Identities=22% Similarity=0.276 Sum_probs=167.7
Q ss_pred hhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCc
Q 043053 316 TVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNN 395 (1058)
Q Consensus 316 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 395 (1058)
+.+++++++++. +|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|.++...+..|.++++|++|+|++|
T Consensus 19 ~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n 95 (270)
T 2o6q_A 19 NSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDN 95 (270)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSS
T ss_pred CEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCC
Confidence 344444444443 233222 46788888888888666667778888888888888888777777888899999999999
Q ss_pred cccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcc
Q 043053 396 RIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPA 475 (1058)
Q Consensus 396 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 475 (1058)
+++++.+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..+.
T Consensus 96 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 175 (270)
T 2o6q_A 96 KLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEG 175 (270)
T ss_dssp CCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChh
Confidence 99988888889999999999999999988888889999999999999999987777789999999999999999877777
Q ss_pred cccccccccccccccccCCCCCCCcccCCcccccccccCCcccCCC
Q 043053 476 SLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSV 521 (1058)
Q Consensus 476 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 521 (1058)
.|..+++|+.|+|++|++++..+..|..+++|+.|++++|++....
T Consensus 176 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 176 AFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred HhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCC
Confidence 8889999999999999999877778999999999999999997544
No 331
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=1.6e-23 Score=229.46 Aligned_cols=205 Identities=25% Similarity=0.275 Sum_probs=133.6
Q ss_pred ccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchh
Q 043053 359 QLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMI 438 (1058)
Q Consensus 359 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 438 (1058)
.+++++++++++|.++ .+|..+. ++++.|+|++|+|+++.+..|..+++|++|+|++|.|++..+. ..+++|+.|
T Consensus 8 ~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L 82 (290)
T 1p9a_G 8 KVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTL 82 (290)
T ss_dssp CSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEE
T ss_pred ccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEE
Confidence 3444555555555554 2333332 4566666666666666666666666666666666666644332 566667777
Q ss_pred hccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCccc
Q 043053 439 DLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLT 518 (1058)
Q Consensus 439 ~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 518 (1058)
+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+
T Consensus 83 ~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 161 (290)
T 1p9a_G 83 DLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT 161 (290)
T ss_dssp ECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS
T ss_pred ECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCC
Confidence 77777766 35566666777777777777776655566777777777777777777666666677777777777777776
Q ss_pred CCCChhhhhhHHHHHHHhhccCCCCCCCCccccccccccEEecCCCcccCCCCcccccCcceeEEEecccccccCC
Q 043053 519 GSVPMELGQIEALEIALNLSCNGLTGPIPAQISALNKLSILDLSHNKLEGNLNPLAQLDNLVSLNISYNKFTGYLP 594 (1058)
Q Consensus 519 ~~~p~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 594 (1058)
+ +| +..|..+++|+.|+|++|+|+..+..+...+.|+.|++++|+|.|.+.
T Consensus 162 ~-l~------------------------~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 162 E-LP------------------------AGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp C-CC------------------------TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred c-cC------------------------HHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcCc
Confidence 2 22 223456677777777777777777667777778888888888877663
No 332
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=2.5e-23 Score=227.83 Aligned_cols=179 Identities=25% Similarity=0.256 Sum_probs=101.5
Q ss_pred hccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccce
Q 043053 334 ASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNF 413 (1058)
Q Consensus 334 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 413 (1058)
..+++++.+++++|+++ .+|..+. ++++.|+|++|.|++..+..|.++++|+.|+|++|.|+++.+. ..+++|++
T Consensus 7 ~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~ 81 (290)
T 1p9a_G 7 SKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGT 81 (290)
T ss_dssp ECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCE
T ss_pred cccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCE
Confidence 34445555555555555 3443333 4555555555555555555555556666666666665544322 45556666
Q ss_pred eeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccC
Q 043053 414 LDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLF 493 (1058)
Q Consensus 414 L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 493 (1058)
|+|++|+|+ .+|..+..+++|+.|+|++|+|+++.+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|
T Consensus 82 L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 82 LDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp EECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 666666665 4455555566666666666666655555566666666666666666555555555566666666666666
Q ss_pred CCCCCCcccCCcccccccccCCccc
Q 043053 494 SGPIPSSLGLCSSLQLLDLSSNQLT 518 (1058)
Q Consensus 494 ~~~~~~~~~~l~~L~~L~l~~N~l~ 518 (1058)
++..+..|..+++|+.|+|++|+|+
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CccCHHHhcCcCCCCEEECCCCcCC
Confidence 6555555555666666666666665
No 333
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.87 E-value=5.5e-23 Score=228.13 Aligned_cols=200 Identities=25% Similarity=0.274 Sum_probs=104.8
Q ss_pred ccchhhhccccCCCCCCCCCc--cCCCCCcEEEccCccccCCcc----ccccCccccceeeccCccCCCCCCCcccCCcc
Q 043053 361 QNLTKLLLISNDISGSIPPEI--GNCSSLVRLRVGNNRIAGLIP----REIGGLKTLNFLDLSSNRLSGSVPDEIGDCTE 434 (1058)
Q Consensus 361 ~~L~~L~L~~N~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 434 (1058)
++|++|++++|.+.+..|..+ ..+++|++|+|++|++++..+ ..+..+++|++|+|++|++.+..+..|..+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 345555555555555555544 555555555555555554322 22334555555555555555555555555555
Q ss_pred cchhhccCCccCCC---C-ccccccCCCCCeeecCCCccccCCcc----cccccccccccccccccCCCCCCCcccCC--
Q 043053 435 LQMIDLSHNTLQGS---L-PNSLSSLSGLQVLDVSDNRFSGQIPA----SLGRLVSLNKIILSKNLFSGPIPSSLGLC-- 504 (1058)
Q Consensus 435 L~~L~l~~N~l~~~---~-~~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-- 504 (1058)
|++|+|++|++.+. . +..+..+++|++|+|++|+++ .++. .+..+++|++|+|++|+|.+..|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 55555555554421 1 122345555666666666554 2222 13445566666666666655555555444
Q ss_pred -cccccccccCCcccCCCChhhhhhHHHHHHHhhccCCCCCCCCccccccccccEEecCCCcccCCCCcccccCcceeEE
Q 043053 505 -SSLQLLDLSSNQLTGSVPMELGQIEALEIALNLSCNGLTGPIPAQISALNKLSILDLSHNKLEGNLNPLAQLDNLVSLN 583 (1058)
Q Consensus 505 -~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ 583 (1058)
++|++|+|++|+|+ .+|..+ . ++|+.|||++|+|++.+. +..+++|+.|+
T Consensus 250 ~~~L~~L~Ls~N~l~-~lp~~~-------------------------~--~~L~~L~Ls~N~l~~~~~-~~~l~~L~~L~ 300 (310)
T 4glp_A 250 SSALNSLNLSFAGLE-QVPKGL-------------------------P--AKLRVLDLSSNRLNRAPQ-PDELPEVDNLT 300 (310)
T ss_dssp CTTCCCEECCSSCCC-SCCSCC-------------------------C--SCCSCEECCSCCCCSCCC-TTSCCCCSCEE
T ss_pred cCcCCEEECCCCCCC-chhhhh-------------------------c--CCCCEEECCCCcCCCCch-hhhCCCccEEE
Confidence 46666666666665 333221 1 456666666666665422 45556666666
Q ss_pred Eeccccc
Q 043053 584 ISYNKFT 590 (1058)
Q Consensus 584 l~~N~l~ 590 (1058)
+++|+|+
T Consensus 301 L~~N~l~ 307 (310)
T 4glp_A 301 LDGNPFL 307 (310)
T ss_dssp CSSTTTS
T ss_pred CcCCCCC
Confidence 6666654
No 334
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=1.4e-24 Score=246.51 Aligned_cols=262 Identities=21% Similarity=0.206 Sum_probs=165.7
Q ss_pred EEEeecCCCcCcCCccccccCCcceeecccCccCCCcc----ccccccc-cchhhhhcCCcccCcCCCcccccchhhhhh
Q 043053 245 MIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIP----ANLANAT-NLVQLQLDTNQISGLIPPEIGMLSKLTVFF 319 (1058)
Q Consensus 245 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~----~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 319 (1058)
.++++.|.+++.+|..+...++|++|++++|.+++..+ ..|..++ +|++|+|++|+|++..+..|..+
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~------- 74 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQI------- 74 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHH-------
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHH-------
Confidence 45778888887777766666678888888888876666 5666676 77777777777776555544443
Q ss_pred ccCcccCCCCChhhhcc-CcccccccccccccccCccccccc-----ccchhhhccccCCCCCCCCCc----cC-CCCCc
Q 043053 320 AWQNQLEGSIPSTLASC-SNLQALDLSHNSLTASVPAGLFQL-----QNLTKLLLISNDISGSIPPEI----GN-CSSLV 388 (1058)
Q Consensus 320 l~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~----~~-l~~L~ 388 (1058)
+... ++|++|+|++|++++..+..+... ++|++|+|++|.|++..+..+ .. .++|+
T Consensus 75 -------------l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~ 141 (362)
T 3goz_A 75 -------------LAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASIT 141 (362)
T ss_dssp -------------HHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCC
T ss_pred -------------HhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCcee
Confidence 0111 445555555555544333333222 455555555555544333222 22 25677
Q ss_pred EEEccCccccCCccc----cccCcc-ccceeeccCccCCCCCCCccc----CC-cccchhhccCCccCCC----Cccccc
Q 043053 389 RLRVGNNRIAGLIPR----EIGGLK-TLNFLDLSSNRLSGSVPDEIG----DC-TELQMIDLSHNTLQGS----LPNSLS 454 (1058)
Q Consensus 389 ~L~L~~N~l~~~~~~----~~~~l~-~L~~L~Ls~N~l~~~~~~~~~----~l-~~L~~L~l~~N~l~~~----~~~~~~ 454 (1058)
+|+|++|+|++..+. .+..++ +|++|+|++|++++..+..+. .+ ++|+.|+|++|.|++. ++..+.
T Consensus 142 ~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~ 221 (362)
T 3goz_A 142 SLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFS 221 (362)
T ss_dssp EEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred EEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHh
Confidence 777777777654333 334444 777777777777765554433 33 4778888888877752 344555
Q ss_pred c-CCCCCeeecCCCccccCCc----ccccccccccccccccccCCCCCC-------CcccCCcccccccccCCcccCCCC
Q 043053 455 S-LSGLQVLDVSDNRFSGQIP----ASLGRLVSLNKIILSKNLFSGPIP-------SSLGLCSSLQLLDLSSNQLTGSVP 522 (1058)
Q Consensus 455 ~-l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l~~~~~-------~~~~~l~~L~~L~l~~N~l~~~~p 522 (1058)
. .++|++|+|++|++++..+ ..+..+++|+.|+|++|.+.+..+ ..+..+++|+.||+++|++.+..+
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 5 3478888888888876544 234566788888888888554433 467788899999999999987655
Q ss_pred hhhh
Q 043053 523 MELG 526 (1058)
Q Consensus 523 ~~~~ 526 (1058)
..+.
T Consensus 302 ~~~~ 305 (362)
T 3goz_A 302 IPIS 305 (362)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 335
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=6.3e-22 Score=212.33 Aligned_cols=183 Identities=22% Similarity=0.266 Sum_probs=166.0
Q ss_pred CcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeec
Q 043053 337 SNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDL 416 (1058)
Q Consensus 337 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 416 (1058)
.+.+.++++++.++ .+|..+. ++++.|+|++|.+++..+..|.++++|++|+|++|.|+++.+..|..+++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 45678899999998 5776665 68999999999999888889999999999999999999998989999999999999
Q ss_pred cCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCC
Q 043053 417 SSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGP 496 (1058)
Q Consensus 417 s~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 496 (1058)
++|++++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 99999988888899999999999999999988888899999999999999999977777899999999999999999988
Q ss_pred CCCcccCCcccccccccCCcccCCCC
Q 043053 497 IPSSLGLCSSLQLLDLSSNQLTGSVP 522 (1058)
Q Consensus 497 ~~~~~~~l~~L~~L~l~~N~l~~~~p 522 (1058)
.+..|..+++|+.|++++|++.+...
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred CHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 88899999999999999999986533
No 336
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.87 E-value=2.1e-22 Score=223.40 Aligned_cols=202 Identities=22% Similarity=0.212 Sum_probs=149.0
Q ss_pred cCcccccccccccccccCcccc--cccccchhhhccccCCCCCCC----CCccCCCCCcEEEccCccccCCccccccCcc
Q 043053 336 CSNLQALDLSHNSLTASVPAGL--FQLQNLTKLLLISNDISGSIP----PEIGNCSSLVRLRVGNNRIAGLIPREIGGLK 409 (1058)
Q Consensus 336 l~~L~~L~Ls~N~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 409 (1058)
+++|++|++++|.+.+..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|+|++..+..|..++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 4557777777777777677666 667777777777777775444 2344678888888888888888778888888
Q ss_pred ccceeeccCccCCCC----CCCcccCCcccchhhccCCccCCCCcc----ccccCCCCCeeecCCCccccCCccccccc-
Q 043053 410 TLNFLDLSSNRLSGS----VPDEIGDCTELQMIDLSHNTLQGSLPN----SLSSLSGLQVLDVSDNRFSGQIPASLGRL- 480 (1058)
Q Consensus 410 ~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~~~----~~~~l~~L~~L~L~~N~l~~~~~~~~~~l- 480 (1058)
+|++|+|++|++.+. .+..+..+++|++|+|++|+++. ++. .+..+++|++|+|++|+|++..|..+..+
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 248 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM 248 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC
T ss_pred CCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc
Confidence 888888888887541 12334678888888888888874 333 35677888888888888887777777666
Q ss_pred --ccccccccccccCCCCCCCcccCCcccccccccCCcccCCCChhhhhhHHHHHHHhhccCCCCCCCCccccccccccE
Q 043053 481 --VSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVPMELGQIEALEIALNLSCNGLTGPIPAQISALNKLSI 558 (1058)
Q Consensus 481 --~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l~~L~~ 558 (1058)
++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.
T Consensus 249 ~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~--------------------------~~~l~~L~~ 298 (310)
T 4glp_A 249 WSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ--------------------------PDELPEVDN 298 (310)
T ss_dssp CCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC--------------------------TTSCCCCSC
T ss_pred CcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch--------------------------hhhCCCccE
Confidence 58888888888888 5566664 7888888888888742 21 245678888
Q ss_pred EecCCCcccC
Q 043053 559 LDLSHNKLEG 568 (1058)
Q Consensus 559 L~L~~N~l~~ 568 (1058)
|+|++|+++.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 8888888864
No 337
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.86 E-value=7.3e-24 Score=240.68 Aligned_cols=258 Identities=15% Similarity=0.126 Sum_probs=138.3
Q ss_pred ecccCccccccCCccccCCCccceeeeeccccccccC----ccccCCC-CccEEEccCCcCCCCCCCCcCCC-----CCc
Q 043053 150 LGLADTQVSGSLPASLGKLSKLQTLSIYTTMISGEIP----AEIGNCS-ELVSLFLYENSLSGSIPPEIGKL-----KKL 219 (1058)
Q Consensus 150 L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~----~~l~~l~-~L~~L~L~~n~l~~~~~~~~~~l-----~~L 219 (1058)
+.++.|.+++.+|..+...++|++|++++|.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 3455555555555554445555555555555554443 4444555 55555555555554444444443 555
Q ss_pred ceeecccccccCCCCccccC----c-CCccEEEeecCCCcCcCCccccc-----cCCcceeecccCccCCCccccccccc
Q 043053 220 EELFLWQNSLVGAIPEEIGN----C-TSLKMIDFSLNSLSGTIPLSIGG-----LSELEEFMISDNNVSGSIPANLANAT 289 (1058)
Q Consensus 220 ~~L~L~~n~l~~~~~~~l~~----l-~~L~~L~L~~n~l~~~~~~~~~~-----l~~L~~L~l~~n~l~~~~~~~~~~l~ 289 (1058)
++|+|++|.+++..+..+.. + ++|++|+|++|.+++..+..+.. .++|++|++++|.+++..+..+.
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~--- 159 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELI--- 159 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHH---
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHH---
Confidence 55555555555444433222 2 45555555555555443333222 13455555555555432222221
Q ss_pred cchhhhhcCCcccCcCCCcccccc-hhhhhhccCcccCCCCChhh----hcc-Cccccccccccccccc----Ccccccc
Q 043053 290 NLVQLQLDTNQISGLIPPEIGMLS-KLTVFFAWQNQLEGSIPSTL----ASC-SNLQALDLSHNSLTAS----VPAGLFQ 359 (1058)
Q Consensus 290 ~L~~L~L~~N~i~~~~~~~~~~l~-~L~~L~l~~N~l~~~~~~~~----~~l-~~L~~L~Ls~N~l~~~----~~~~~~~ 359 (1058)
..+..++ +|++|++++|++++..+..+ ..+ ++|+.|+|++|.|++. ++..+..
T Consensus 160 -----------------~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~ 222 (362)
T 3goz_A 160 -----------------QILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSS 222 (362)
T ss_dssp -----------------HHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHH
T ss_pred -----------------HHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhc
Confidence 1111222 44444444444444444333 333 4777788888877753 3334444
Q ss_pred -cccchhhhccccCCCCCCC----CCccCCCCCcEEEccCccccCCcc-------ccccCccccceeeccCccCCCCCCC
Q 043053 360 -LQNLTKLLLISNDISGSIP----PEIGNCSSLVRLRVGNNRIAGLIP-------REIGGLKTLNFLDLSSNRLSGSVPD 427 (1058)
Q Consensus 360 -l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~-------~~~~~l~~L~~L~Ls~N~l~~~~~~ 427 (1058)
.++|++|+|++|.|++..+ ..+..+++|++|+|++|.+.++.+ ..+..+++|++||+++|.+....+.
T Consensus 223 ~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~ 302 (362)
T 3goz_A 223 IPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSI 302 (362)
T ss_dssp SCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCH
T ss_pred CCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchH
Confidence 3477777777777775443 345667788888888888655443 3566777888888888888755443
No 338
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.86 E-value=1.2e-22 Score=216.47 Aligned_cols=178 Identities=18% Similarity=0.228 Sum_probs=88.4
Q ss_pred cchhhhhcCCcccCcCCCcccccchhhhhhccCcc-cCCCCChhhhccCccccccccc-ccccccCcccccccccchhhh
Q 043053 290 NLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQ-LEGSIPSTLASCSNLQALDLSH-NSLTASVPAGLFQLQNLTKLL 367 (1058)
Q Consensus 290 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~ 367 (1058)
+|++|++++|+|+++.+..|..+++|++|++++|+ ++.+.+..|.++++|++|++++ |++++..+..|..+++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 34444444444443333334444444444444443 3333334445555555555555 555543334444455555555
Q ss_pred ccccCCCCCCCCCccCCCCCc---EEEccCc-cccCCccccccCccccc-eeeccCccCCCCCCCcccCCcccchhhccC
Q 043053 368 LISNDISGSIPPEIGNCSSLV---RLRVGNN-RIAGLIPREIGGLKTLN-FLDLSSNRLSGSVPDEIGDCTELQMIDLSH 442 (1058)
Q Consensus 368 L~~N~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~ 442 (1058)
+++|.+++ +|. |..+++|+ +|++++| +++++.+..|.++++|+ +|++++|+++.+.+..|.. ++|+.|++++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCC
Confidence 55555543 332 45555555 6666666 55555555555566666 6666666555333333333 5555555555
Q ss_pred Cc-cCCCCccccccC-CCCCeeecCCCccc
Q 043053 443 NT-LQGSLPNSLSSL-SGLQVLDVSDNRFS 470 (1058)
Q Consensus 443 N~-l~~~~~~~~~~l-~~L~~L~L~~N~l~ 470 (1058)
|+ ++++.+..|.++ ++|+.|++++|+++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 53 554444555555 55555555555555
No 339
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=2.3e-22 Score=218.67 Aligned_cols=153 Identities=16% Similarity=0.094 Sum_probs=117.5
Q ss_pred ccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCccc--------chHHHHHHHHHHHcccCCCccccee
Q 043053 706 LVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKS--------GVRDSFSAEIKTLGSIRHKNIVRFL 777 (1058)
Q Consensus 706 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~ 777 (1058)
|.+.+.||+|+||.||+|...+|+.||||++......... ...... .....+.+|++++++++ | ++++
T Consensus 92 ~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~-~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~ 167 (282)
T 1zar_A 92 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKK-VKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVP 167 (282)
T ss_dssp SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------C-CCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSC
T ss_pred EEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhh-hhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcC
Confidence 4566999999999999996688999999998643211110 000000 23567999999999999 4 6666
Q ss_pred eEEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeee
Q 043053 778 GCCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYI 857 (1058)
Q Consensus 778 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl 857 (1058)
+++. .+..|+||||++||+|.+ +.. .....++.|+++||+|||+. +|+||||||+|||++ ++.+||
T Consensus 168 ~~~~-~~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl 233 (282)
T 1zar_A 168 KVYA-WEGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWI 233 (282)
T ss_dssp CEEE-EETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEE
T ss_pred eEEe-ccceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEE
Confidence 6554 356799999999999998 432 12447999999999999999 999999999999999 999999
Q ss_pred eccccceeccCCCcccccccccCcCCccCccccc
Q 043053 858 ADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGY 891 (1058)
Q Consensus 858 ~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 891 (1058)
+|||+++. +..|+|||++.
T Consensus 234 ~DFG~a~~---------------~~~~~a~e~l~ 252 (282)
T 1zar_A 234 IDFPQSVE---------------VGEEGWREILE 252 (282)
T ss_dssp CCCTTCEE---------------TTSTTHHHHHH
T ss_pred EECCCCeE---------------CCCCCHHHHHH
Confidence 99999863 34578999754
No 340
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=5.5e-22 Score=219.48 Aligned_cols=192 Identities=26% Similarity=0.404 Sum_probs=111.2
Q ss_pred cccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhh
Q 043053 360 LQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMID 439 (1058)
Q Consensus 360 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 439 (1058)
+++|++|++++|.+.. ++ .+..+++|++|+|++|.++++.+ +..+++|++|+|++|++++. ..+..+++|+.|+
T Consensus 40 l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEE
Confidence 4444444444444442 22 35555556666666665555433 55556666666666665532 2455566666666
Q ss_pred ccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCcccC
Q 043053 440 LSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTG 519 (1058)
Q Consensus 440 l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 519 (1058)
+++|++++. + .+..+++|++|++++|++++..+ +..+++|+.|+|++|++++..+ +..+++|+.|++++|++++
T Consensus 114 l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 114 LTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp CTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCc
Confidence 666666543 2 25666666666666666654332 5566666666666666664332 6666667777777666653
Q ss_pred CCChhhhhhHHHHHHHhhccCCCCCCCCccccccccccEEecCCCcccCCCCcccccCcceeEEEecccccc
Q 043053 520 SVPMELGQIEALEIALNLSCNGLTGPIPAQISALNKLSILDLSHNKLEGNLNPLAQLDNLVSLNISYNKFTG 591 (1058)
Q Consensus 520 ~~p~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~ 591 (1058)
..+ +..+++|+.|+|++|++++.+ ++..+++|+.|++++|++++
T Consensus 188 ~~~---------------------------l~~l~~L~~L~L~~N~l~~~~-~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 188 ISP---------------------------LASLPNLIEVHLKNNQISDVS-PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CGG---------------------------GGGCTTCCEEECTTSCCCBCG-GGTTCTTCCEEEEEEEEEEC
T ss_pred Chh---------------------------hcCCCCCCEEEccCCccCccc-cccCCCCCCEEEccCCeeec
Confidence 211 345666777777777776654 36667777777777777764
No 341
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.86 E-value=1.4e-22 Score=215.82 Aligned_cols=196 Identities=15% Similarity=0.201 Sum_probs=135.6
Q ss_pred CccEEEeecCCCcCcCCccccccCCcceeecccCc-cCCCccccccccccchhhhhcC-CcccCcCCCcccccchhhhhh
Q 043053 242 SLKMIDFSLNSLSGTIPLSIGGLSELEEFMISDNN-VSGSIPANLANATNLVQLQLDT-NQISGLIPPEIGMLSKLTVFF 319 (1058)
Q Consensus 242 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~L~~-N~i~~~~~~~~~~l~~L~~L~ 319 (1058)
+|++|++++|++++..+..|.++++|++|++++|+ ++.+.+..|..+++|++|++++ |++++
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~---------------- 95 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTY---------------- 95 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCE----------------
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeE----------------
Confidence 56666666666665555556666666666666664 5544444555555555555555 55544
Q ss_pred ccCcccCCCCChhhhccCcccccccccccccccCcccccccccch---hhhcccc-CCCCCCCCCccCCCCCc-EEEccC
Q 043053 320 AWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLT---KLLLISN-DISGSIPPEIGNCSSLV-RLRVGN 394 (1058)
Q Consensus 320 l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~~~~~~~l~~L~-~L~L~~ 394 (1058)
..+..|..+++|++|++++|++++ +|. +..+++|+ +|++++| .+++..+..|.++++|+ .|++++
T Consensus 96 --------i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~ 165 (239)
T 2xwt_C 96 --------IDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYN 165 (239)
T ss_dssp --------ECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCS
T ss_pred --------cCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCC
Confidence 444556666666777777777664 444 55666666 7777777 77766667788888888 888888
Q ss_pred ccccCCccccccCccccceeeccCcc-CCCCCCCcccCC-cccchhhccCCccCCCCccccccCCCCCeeecCCC
Q 043053 395 NRIAGLIPREIGGLKTLNFLDLSSNR-LSGSVPDEIGDC-TELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDN 467 (1058)
Q Consensus 395 N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N 467 (1058)
|+++.+.+..|.. ++|++|+|++|+ ++++.+..|..+ ++|+.|++++|+|+++.+. .+++|+.|+++++
T Consensus 166 n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 166 NGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 8888666666666 788888898885 887777888888 8899999999988864443 5677888888776
No 342
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=9.7e-22 Score=210.88 Aligned_cols=154 Identities=24% Similarity=0.323 Sum_probs=99.0
Q ss_pred cchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhcc
Q 043053 362 NLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLS 441 (1058)
Q Consensus 362 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~ 441 (1058)
+.++++++++.++ .+|..+. ++|+.|+|++|.|+++.+..|.++++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4556677777776 3444443 466777777777776666667777777777777777766666666666667777777
Q ss_pred CCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCccc
Q 043053 442 HNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLT 518 (1058)
Q Consensus 442 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 518 (1058)
+|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+++
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 168 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ 168 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCC
Confidence 77666666666666666666666666666555555566666666666666666555555555666666666666555
No 343
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=3.9e-22 Score=220.72 Aligned_cols=213 Identities=24% Similarity=0.374 Sum_probs=162.2
Q ss_pred ccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhhhc
Q 043053 289 TNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLL 368 (1058)
Q Consensus 289 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 368 (1058)
.++..+.+..+.+.+.. .+..+++|++|++.+|.++.. + .+..+++|++|++++|++++..+ +..+++|++|+|
T Consensus 19 ~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L 92 (308)
T 1h6u_A 19 ANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELEL 92 (308)
T ss_dssp HHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEEC
T ss_pred HHHHHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEc
Confidence 44555566666665432 345667777777777777653 3 57778888888888888875433 777888888888
Q ss_pred cccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCC
Q 043053 369 ISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGS 448 (1058)
Q Consensus 369 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 448 (1058)
++|.+++. ..+..+++|++|++++|+++++. .+..+++|++|++++|++++..+ +..+++|+.|++++|++++.
T Consensus 93 ~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~ 166 (308)
T 1h6u_A 93 SGNPLKNV--SAIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL 166 (308)
T ss_dssp CSCCCSCC--GGGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred cCCcCCCc--hhhcCCCCCCEEECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC
Confidence 88888753 36888888888888888888753 38888888888888888886544 78888888888888888864
Q ss_pred CccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCcccC
Q 043053 449 LPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTG 519 (1058)
Q Consensus 449 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 519 (1058)
.+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|++++.. .+..+++|+.|++++|++++
T Consensus 167 ~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 167 TP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp GG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred hh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 43 8888888888888888875443 778888888889888888655 37888889999999998873
No 344
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.85 E-value=1.2e-23 Score=236.81 Aligned_cols=253 Identities=18% Similarity=0.231 Sum_probs=144.8
Q ss_pred ccEEecCCCCCCCCCChhhcCc--ccCCEEeccccCCCCccccccccchhhhHHhhhhccccCC-Chhhhcccccchhhh
Q 043053 50 LIVLDFSSNNLVGTLPSSLGKL--HNLEELILNSNQLTGKIPVELSNCKSLRKLLLFDNALAGN-IPAELGRLSNLEEMR 126 (1058)
Q Consensus 50 L~~L~l~~~~i~~~lp~~l~~l--~~L~~L~L~~n~~~~~~p~~l~~l~~L~~L~L~~n~~~~~-~p~~l~~l~~L~~L~ 126 (1058)
++.|+++++.+. |..+..+ .++++|++++|.+.+..+. +..+++|++|++++|.+.+. +|..+.++++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 444555554443 3334444 4555555555554433222 33455555555555544432 444455555555555
Q ss_pred cCCCccccCCCCccccCCCCCceecccCc-ccccc-CCccccCCCccceeeeecc-ccccc-cCccccCCC-CccEEEcc
Q 043053 127 AGGNKDIVGKIPAELGDCSNMTALGLADT-QVSGS-LPASLGKLSKLQTLSIYTT-MISGE-IPAEIGNCS-ELVSLFLY 201 (1058)
Q Consensus 127 l~~~~~~~~~l~~~l~~l~~L~~L~l~~~-~~~~~-~~~~l~~l~~L~~L~l~~n-~i~~~-~~~~l~~l~-~L~~L~L~ 201 (1058)
+++|. +.+..+..++.+++|++|++++| .+++. ++..+.++++|++|++++| .+++. ++..+..++ +|++|+|+
T Consensus 125 L~~~~-l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 125 LEGLR-LSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp CTTCB-CCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred CcCcc-cCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 55553 22334445555566666666665 44432 4445666667777777766 66543 455566667 77777777
Q ss_pred CC--cCC-CCCCCCcCCCCCcceeeccccc-ccCCCCccccCcCCccEEEeecCC-CcCcCCccccccCCcceeecccCc
Q 043053 202 EN--SLS-GSIPPEIGKLKKLEELFLWQNS-LVGAIPEEIGNCTSLKMIDFSLNS-LSGTIPLSIGGLSELEEFMISDNN 276 (1058)
Q Consensus 202 ~n--~l~-~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~l~~n~ 276 (1058)
+| .++ +.++..+..+++|++|++++|. +++..+..+..+++|++|++++|. +.......++.+++|++|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 77 343 2345555667777777777777 555556667777777777777774 33222235667777888888777
Q ss_pred cCCCcccccccc-ccchhhhhcCCcccCcCCCcccc
Q 043053 277 VSGSIPANLANA-TNLVQLQLDTNQISGLIPPEIGM 311 (1058)
Q Consensus 277 l~~~~~~~~~~l-~~L~~L~L~~N~i~~~~~~~~~~ 311 (1058)
+.. ..+..+ .++..|++++|++++..|..++.
T Consensus 283 i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 283 VPD---GTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred cCH---HHHHHHHhhCcceEEecccCccccCCcccc
Confidence 332 233333 34777778888888887777664
No 345
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.85 E-value=2.5e-24 Score=247.09 Aligned_cols=250 Identities=21% Similarity=0.262 Sum_probs=118.8
Q ss_pred CCCCcCCCCCcceeecccccccCCCC----ccccCcCCccEEEeecCCC---cCcCCccc-------cccCCcceeeccc
Q 043053 209 IPPEIGKLKKLEELFLWQNSLVGAIP----EEIGNCTSLKMIDFSLNSL---SGTIPLSI-------GGLSELEEFMISD 274 (1058)
Q Consensus 209 ~~~~~~~l~~L~~L~L~~n~l~~~~~----~~l~~l~~L~~L~L~~n~l---~~~~~~~~-------~~l~~L~~L~l~~ 274 (1058)
++..+..+++|+.|+|++|.+.+..+ ..|..+++|++|+|++|.+ ++.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 44555666777777777777765433 2355677777777777533 33334333 4556666666666
Q ss_pred CccCC----CccccccccccchhhhhcCCcccCcCCCcccc-cchhhhhhccCcccCCCCChhhhccCcccccccccccc
Q 043053 275 NNVSG----SIPANLANATNLVQLQLDTNQISGLIPPEIGM-LSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSL 349 (1058)
Q Consensus 275 n~l~~----~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~-l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 349 (1058)
|.+.. .++..+..+++|++|+|++|.|+...+..+.. +..+. .|++. +..++|++|+|++|++
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~-----~~~~~-------~~~~~L~~L~L~~n~l 171 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELA-----VNKKA-------KNAPPLRSIICGRNRL 171 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHH-----HHHHH-------HTCCCCCEEECCSSCC
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHh-----hhhhc-------ccCCCCcEEECCCCCC
Confidence 66665 24445555666666666666654332222221 00000 00000 0015666666666666
Q ss_pred cc-cCc---ccccccccchhhhccccCCCC-----CCCCCccCCCCCcEEEccCcccc----CCccccccCccccceeec
Q 043053 350 TA-SVP---AGLFQLQNLTKLLLISNDISG-----SIPPEIGNCSSLVRLRVGNNRIA----GLIPREIGGLKTLNFLDL 416 (1058)
Q Consensus 350 ~~-~~~---~~~~~l~~L~~L~L~~N~l~~-----~~~~~~~~l~~L~~L~L~~N~l~----~~~~~~~~~l~~L~~L~L 416 (1058)
+. .++ ..+..+++|++|+|++|+|+. ..+..+..+++|+.|+|++|.|+ ...|..+..+++|++|+|
T Consensus 172 ~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L 251 (386)
T 2ca6_A 172 ENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGL 251 (386)
T ss_dssp TGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEEC
T ss_pred CcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEEC
Confidence 52 222 233344445555555554441 12224444555555555555553 233444444555555555
Q ss_pred cCccCCCC----CCCcc--cCCcccchhhccCCccCC----CCcccc-ccCCCCCeeecCCCccc
Q 043053 417 SSNRLSGS----VPDEI--GDCTELQMIDLSHNTLQG----SLPNSL-SSLSGLQVLDVSDNRFS 470 (1058)
Q Consensus 417 s~N~l~~~----~~~~~--~~l~~L~~L~l~~N~l~~----~~~~~~-~~l~~L~~L~L~~N~l~ 470 (1058)
++|.|++. ++..+ +.+++|+.|+|++|.|++ .+|..+ .++++|+.|++++|+++
T Consensus 252 ~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~ 316 (386)
T 2ca6_A 252 NDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 316 (386)
T ss_dssp TTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred CCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCC
Confidence 55554432 22222 124444444444444443 133333 33444444444444444
No 346
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.85 E-value=4.1e-24 Score=245.34 Aligned_cols=265 Identities=22% Similarity=0.213 Sum_probs=152.8
Q ss_pred cCCccccCCCccceeeeeccccccccC----ccccCCCCccEEEccCCcCC---CCCCCCc-------CCCCCcceeecc
Q 043053 160 SLPASLGKLSKLQTLSIYTTMISGEIP----AEIGNCSELVSLFLYENSLS---GSIPPEI-------GKLKKLEELFLW 225 (1058)
Q Consensus 160 ~~~~~l~~l~~L~~L~l~~n~i~~~~~----~~l~~l~~L~~L~L~~n~l~---~~~~~~~-------~~l~~L~~L~L~ 225 (1058)
.++..+..+++|+.|++++|.+++..+ ..+..+++|++|+|++|.+. +.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 455556666666666666666665433 33556677777777765433 3334333 566677777777
Q ss_pred cccccC----CCCccccCcCCccEEEeecCCCcCcCCccccc----c---------CCcceeecccCccCC-Ccc---cc
Q 043053 226 QNSLVG----AIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGG----L---------SELEEFMISDNNVSG-SIP---AN 284 (1058)
Q Consensus 226 ~n~l~~----~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~----l---------~~L~~L~l~~n~l~~-~~~---~~ 284 (1058)
+|.+.+ .++..+..+++|++|+|++|.+++..+..+.. + ++|++|++++|.++. ..+ ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 777665 24445666677777777777765433333332 2 667777777776652 222 34
Q ss_pred ccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCccccccccccccc----ccCccccccc
Q 043053 285 LANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLT----ASVPAGLFQL 360 (1058)
Q Consensus 285 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~----~~~~~~~~~l 360 (1058)
+..+++|++|+|++|+|+.... ....+..+..+++|+.|+|++|.++ ..+|..+..+
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~-------------------~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~ 243 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGI-------------------EHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSW 243 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHH-------------------HHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGC
T ss_pred HHhCCCcCEEECcCCCCCHhHH-------------------HHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccC
Confidence 5556666666666666652100 0011224455556666666666653 3445555556
Q ss_pred ccchhhhccccCCCCC----CCCCc--cCCCCCcEEEccCccccC----Cccccc-cCccccceeeccCccCCCCCC--C
Q 043053 361 QNLTKLLLISNDISGS----IPPEI--GNCSSLVRLRVGNNRIAG----LIPREI-GGLKTLNFLDLSSNRLSGSVP--D 427 (1058)
Q Consensus 361 ~~L~~L~L~~N~l~~~----~~~~~--~~l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~~L~Ls~N~l~~~~~--~ 427 (1058)
++|++|+|++|.|++. ++..+ +.+++|++|+|++|.|++ ..|..+ ..+++|++|+|++|.+++..+ .
T Consensus 244 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~~~~ 323 (386)
T 2ca6_A 244 PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVD 323 (386)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSHHHH
T ss_pred CCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchhHHH
Confidence 6666666666666543 33444 337788888888888876 345555 557888888888888876553 2
Q ss_pred cc-cCCcccchhhccCC
Q 043053 428 EI-GDCTELQMIDLSHN 443 (1058)
Q Consensus 428 ~~-~~l~~L~~L~l~~N 443 (1058)
.+ ..+++++.+++..+
T Consensus 324 ~l~~~l~~~~~~~l~~~ 340 (386)
T 2ca6_A 324 EIREVFSTRGRGELDEL 340 (386)
T ss_dssp HHHHHHHHHTCCEECCC
T ss_pred HHHHHhhhcCcchhhhc
Confidence 22 23445554555443
No 347
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=3e-21 Score=217.88 Aligned_cols=239 Identities=20% Similarity=0.197 Sum_probs=105.7
Q ss_pred EEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCcCC-ccccccCCcce-eeccc
Q 043053 197 SLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIP-LSIGGLSELEE-FMISD 274 (1058)
Q Consensus 197 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~-L~l~~ 274 (1058)
+++.++++++ .+|..+. +++++|+|++|+|+...+..|.++++|++|+|++|++.+.++ ..|.++++|.+ +.++.
T Consensus 13 ~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 4455555555 4444331 345555555555553333445555555555555555433322 23444444333 23333
Q ss_pred CccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCccccccccc-ccccccC
Q 043053 275 NNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSH-NSLTASV 353 (1058)
Q Consensus 275 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~ 353 (1058)
|++..+.+..|..+++|++|++++|+|.. ..+..+....++..|++++ |++....
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~------------------------~~~~~~~~~~~l~~l~l~~~~~i~~l~ 145 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKH------------------------LPDVHKIHSLQKVLLDIQDNINIHTIE 145 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSS------------------------CCCCTTCCBSSCEEEEEESCTTCCEEC
T ss_pred CcccccCchhhhhcccccccccccccccc------------------------CCchhhcccchhhhhhhcccccccccc
Confidence 44443333333444444444444433333 3333333333444444433 3343322
Q ss_pred cccccccc-cchhhhccccCCCCCCCCCccCCCCCcEEEcc-CccccCCccccccCccccceeeccCccCCCCCCCcccC
Q 043053 354 PAGLFQLQ-NLTKLLLISNDISGSIPPEIGNCSSLVRLRVG-NNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGD 431 (1058)
Q Consensus 354 ~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~-~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 431 (1058)
+..|..+. .++.|+|++|+|+.+.+..| ...+|++|++. +|.++.+.+..|.++++|++|||++|+|+.+.+..|.+
T Consensus 146 ~~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~ 224 (350)
T 4ay9_X 146 RNSFVGLSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN 224 (350)
T ss_dssp TTSSTTSBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTT
T ss_pred ccchhhcchhhhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhcc
Confidence 22333322 34444455555443322222 23445555554 34455444455555555555555555555444444554
Q ss_pred CcccchhhccCCccCCCCccccccCCCCCeeecCCC
Q 043053 432 CTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDN 467 (1058)
Q Consensus 432 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N 467 (1058)
+++|+.+++ +.++ .+| .+..+++|+.++++++
T Consensus 225 L~~L~~l~~--~~l~-~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 225 LKKLRARST--YNLK-KLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp CCEEECTTC--TTCC-CCC-CTTTCCSCCEEECSCH
T ss_pred chHhhhccC--CCcC-cCC-CchhCcChhhCcCCCC
Confidence 444444443 2233 233 2455555555555443
No 348
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.84 E-value=5.2e-23 Score=231.49 Aligned_cols=222 Identities=17% Similarity=0.168 Sum_probs=121.4
Q ss_pred cceeeeeccccccccCccccCC--CCccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCC-CCccccCcCCccEEE
Q 043053 171 LQTLSIYTTMISGEIPAEIGNC--SELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGA-IPEEIGNCTSLKMID 247 (1058)
Q Consensus 171 L~~L~l~~n~i~~~~~~~l~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~ 247 (1058)
++.++++++.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|++++|.+.+. ++..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 566777666654 3344555 6677777777777654443 44567777777777766543 455566667777777
Q ss_pred eecCCCcCcCCccccccCCcceeecccC-ccCCC-ccccccccccchhhhhcCC-cccCcCCCcccccchhhhhhccCcc
Q 043053 248 FSLNSLSGTIPLSIGGLSELEEFMISDN-NVSGS-IPANLANATNLVQLQLDTN-QISGLIPPEIGMLSKLTVFFAWQNQ 324 (1058)
Q Consensus 248 L~~n~l~~~~~~~~~~l~~L~~L~l~~n-~l~~~-~~~~~~~l~~L~~L~L~~N-~i~~~~~~~~~~l~~L~~L~l~~N~ 324 (1058)
|++|.+++..+..++.+++|++|++++| .+++. .+..+..+++|++|++++| .+++.
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~-------------------- 184 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK-------------------- 184 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH--------------------
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH--------------------
Confidence 7777666555666666666666666666 45432 3444555555555555555 44421
Q ss_pred cCCCCChhhhccC-ccccccccccc--cc-ccCcccccccccchhhhccccC-CCCCCCCCccCCCCCcEEEccCcc-cc
Q 043053 325 LEGSIPSTLASCS-NLQALDLSHNS--LT-ASVPAGLFQLQNLTKLLLISND-ISGSIPPEIGNCSSLVRLRVGNNR-IA 398 (1058)
Q Consensus 325 l~~~~~~~~~~l~-~L~~L~Ls~N~--l~-~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~-l~ 398 (1058)
.++..+..++ +|++|++++|. ++ +.++..+..+++|++|++++|. +++..+..+..+++|++|++++|. +.
T Consensus 185 ---~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~ 261 (336)
T 2ast_B 185 ---HVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDII 261 (336)
T ss_dssp ---HHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCC
T ss_pred ---HHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCC
Confidence 0233455566 66666666663 33 2233344445555555555554 333344444555555555555553 21
Q ss_pred CCccccccCccccceeeccCc
Q 043053 399 GLIPREIGGLKTLNFLDLSSN 419 (1058)
Q Consensus 399 ~~~~~~~~~l~~L~~L~Ls~N 419 (1058)
......+..+++|++|++++|
T Consensus 262 ~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 262 PETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp GGGGGGGGGCTTCCEEECTTS
T ss_pred HHHHHHHhcCCCCCEEeccCc
Confidence 111113444555555555554
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=2.6e-21 Score=218.47 Aligned_cols=241 Identities=18% Similarity=0.194 Sum_probs=187.7
Q ss_pred ceeeeeccccccccCccccCCCCccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCC-ccccCcCCccE-EEee
Q 043053 172 QTLSIYTTMISGEIPAEIGNCSELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIP-EEIGNCTSLKM-IDFS 249 (1058)
Q Consensus 172 ~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~-L~L~ 249 (1058)
+.++-+++.++ .+|..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.++ ..|.++++|++ +.+.
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 56777888887 778766 3689999999999995555689999999999999999866554 56889998876 6677
Q ss_pred cCCCcCcCCccccccCCcceeecccCccCCCccccccccccchhhhhcC-CcccCcCCCcccccchhhhhhccCcccCCC
Q 043053 250 LNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDT-NQISGLIPPEIGMLSKLTVFFAWQNQLEGS 328 (1058)
Q Consensus 250 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~-N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~ 328 (1058)
+|+++...+..|.++++|++|++++|++....+..+....++..|++.+ |++..+.+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~--------------------- 147 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERN--------------------- 147 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTT---------------------
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccccccccc---------------------
Confidence 8999988889999999999999999999987777777777777777754 455544333
Q ss_pred CChhhhccC-cccccccccccccccCcccccccccchhhhccc-cCCCCCCCCCccCCCCCcEEEccCccccCCcccccc
Q 043053 329 IPSTLASCS-NLQALDLSHNSLTASVPAGLFQLQNLTKLLLIS-NDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIG 406 (1058)
Q Consensus 329 ~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 406 (1058)
.|..+. .++.|+|++|+|+. ++...+...+|++|++.+ |.++.+.+..|.++++|++|+|++|+|+.+.+..|.
T Consensus 148 ---~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~ 223 (350)
T 4ay9_X 148 ---SFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE 223 (350)
T ss_dssp ---SSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCT
T ss_pred ---chhhcchhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhc
Confidence 344433 57778888888884 555666667888888874 677766667889999999999999999988777777
Q ss_pred CccccceeeccCccCCCCCCCcccCCcccchhhccCCc
Q 043053 407 GLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNT 444 (1058)
Q Consensus 407 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 444 (1058)
++++|+.+++ +.++ .+| .+..+++|+.++++++.
T Consensus 224 ~L~~L~~l~~--~~l~-~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 224 NLKKLRARST--YNLK-KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp TCCEEECTTC--TTCC-CCC-CTTTCCSCCEEECSCHH
T ss_pred cchHhhhccC--CCcC-cCC-CchhCcChhhCcCCCCc
Confidence 7777766555 3454 455 37888999999987764
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.82 E-value=1.6e-20 Score=195.14 Aligned_cols=175 Identities=25% Similarity=0.324 Sum_probs=89.4
Q ss_pred ccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCcc
Q 043053 341 ALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNR 420 (1058)
Q Consensus 341 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 420 (1058)
.++++++.++ .+|..+ .++|++|++++|++++..+..|..+++|++|++++|+|+++.+..|..+++|++|+|++|+
T Consensus 11 ~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 11 TVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp EEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 3445555554 233322 2345555555555554444445555555555555555555544455555555555555555
Q ss_pred CCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCc
Q 043053 421 LSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSS 500 (1058)
Q Consensus 421 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 500 (1058)
+++..+..|..+++|+.|++++|+|++..+..|..+++|++|++++|++++..+..|..+++|+.|+|++|++.+
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~----- 162 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC----- 162 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-----
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-----
Confidence 554444445555555555555555555444445555555555555555554444444555555555555554432
Q ss_pred ccCCcccccccccCCcccCCCChhh
Q 043053 501 LGLCSSLQLLDLSSNQLTGSVPMEL 525 (1058)
Q Consensus 501 ~~~l~~L~~L~l~~N~l~~~~p~~~ 525 (1058)
.+++|++|+++.|+++|.+|.++
T Consensus 163 --~~~~l~~L~~~~n~~~g~ip~~~ 185 (208)
T 2o6s_A 163 --TCPGIRYLSEWINKHSGVVRNSA 185 (208)
T ss_dssp --CTTTTHHHHHHHHHCTTTBBCTT
T ss_pred --CCCCHHHHHHHHHhCCceeeccC
Confidence 22344555555555555444444
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.81 E-value=9.5e-20 Score=189.30 Aligned_cols=181 Identities=20% Similarity=0.227 Sum_probs=159.2
Q ss_pred hhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCC
Q 043053 364 TKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHN 443 (1058)
Q Consensus 364 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 443 (1058)
+.++.+++.++. +|..+ .++|++|++++|+++++.+..|..+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 456778888874 45444 368999999999999998888999999999999999999888888999999999999999
Q ss_pred ccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCcccCCCCh
Q 043053 444 TLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVPM 523 (1058)
Q Consensus 444 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 523 (1058)
++++..+..|..+++|++|++++|+|++..+..|..+++|+.|+|++|++++..+..|..+++|+.|++++|++.+..|.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 166 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 166 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCCC
Confidence 99988888899999999999999999987777899999999999999999988888899999999999999999876552
Q ss_pred hhhhhHHHHHHHhhccCCCCCCCCcccccccc
Q 043053 524 ELGQIEALEIALNLSCNGLTGPIPAQISALNK 555 (1058)
Q Consensus 524 ~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l~~ 555 (1058)
+ ..++++.|+++|.+|.+++.++.
T Consensus 167 -------l-~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 167 -------I-RYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp -------T-HHHHHHHHHCTTTBBCTTSSBCT
T ss_pred -------H-HHHHHHHHhCCceeeccCccccC
Confidence 2 25788899999999988877665
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.80 E-value=3e-20 Score=220.33 Aligned_cols=188 Identities=26% Similarity=0.353 Sum_probs=145.2
Q ss_pred hhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEcc
Q 043053 314 KLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVG 393 (1058)
Q Consensus 314 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 393 (1058)
+++.|++++|++++ +|..+ .++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 56666666666665 34333 267888888888888 466 346788888888888886 555 655 89999999
Q ss_pred CccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCC
Q 043053 394 NNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQI 473 (1058)
Q Consensus 394 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 473 (1058)
+|+|+++ |. .+++|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~l-p~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTML-PE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSCC-CC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCCC-CC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 9999885 43 67889999999999986 454 56889999999999987 555 65 88999999999998 66
Q ss_pred cccccccccc-------cccccccccCCCCCCCcccCCcccccccccCCcccCCCChhhhhhH
Q 043053 474 PASLGRLVSL-------NKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVPMELGQIE 529 (1058)
Q Consensus 474 ~~~~~~l~~L-------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 529 (1058)
|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..+..+.
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 66 654 77 99999999998 5787788899999999999999988887776554
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.78 E-value=3.7e-19 Score=210.94 Aligned_cols=134 Identities=31% Similarity=0.464 Sum_probs=60.7
Q ss_pred cccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeecc
Q 043053 338 NLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLS 417 (1058)
Q Consensus 338 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 417 (1058)
+|+.|+|++|+|++ +|..++ ++|++|+|++|+|+ .+| ..+++|+.|+|++|+|+++ |. |.. +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~i-p~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLSTL-PE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSCC-CC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCCc-ch-hhc--CCCEEECC
Confidence 56666666666654 444332 44555555555555 233 2234555555555555542 22 332 45555555
Q ss_pred CccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCC
Q 043053 418 SNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFS 494 (1058)
Q Consensus 418 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 494 (1058)
+|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|+|+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~ 193 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE 193 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC
Confidence 555543 222 33444444444444443 222 23444444444444443 333 32 34444444444443
No 354
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=2.7e-19 Score=187.20 Aligned_cols=128 Identities=21% Similarity=0.300 Sum_probs=60.8
Q ss_pred cEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCC
Q 043053 388 VRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDN 467 (1058)
Q Consensus 388 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N 467 (1058)
+.+++++|.++.+ |..+. ++|++|+|++|+|+++.+..|..+++|+.|+|++|+|+++.|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~i-P~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTEI-PTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSSC-CSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCcC-CCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 3455555555543 22221 34555555555555444445555555555555555555444555555555555555555
Q ss_pred ccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCccc
Q 043053 468 RFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLT 518 (1058)
Q Consensus 468 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 518 (1058)
+|+...+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 141 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ 141 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCC
Confidence 554333333444444444444444444444444444444444444444443
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=3e-19 Score=195.66 Aligned_cols=173 Identities=27% Similarity=0.384 Sum_probs=119.0
Q ss_pred hhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccc
Q 043053 333 LASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLN 412 (1058)
Q Consensus 333 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 412 (1058)
+..+++|+.|++++|.+... + .+..+++|++|++++|++++..+ +..+++|+.|++++|+++++ ..+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccCCCCC
Confidence 34566666667776666632 2 35566677777777777765433 67777777777777777653 2377777777
Q ss_pred eeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCccccccccccccccccccc
Q 043053 413 FLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNL 492 (1058)
Q Consensus 413 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 492 (1058)
+|+|++|++++. ..+..+++|+.|++++|++++. ..+..+++|+.|++++|++++..+ +..+++|+.|+|++|+
T Consensus 116 ~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 116 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCc
Confidence 777777777653 4566777777777777777754 467777777777777777775444 7777777777777777
Q ss_pred CCCCCCCcccCCcccccccccCCcccC
Q 043053 493 FSGPIPSSLGLCSSLQLLDLSSNQLTG 519 (1058)
Q Consensus 493 l~~~~~~~~~~l~~L~~L~l~~N~l~~ 519 (1058)
|++. + .+..+++|+.|++++|+++.
T Consensus 190 i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 190 ISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCCC-h-hhccCCCCCEEECcCCcccC
Confidence 7753 3 37777788888888887763
No 356
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=1.5e-19 Score=197.96 Aligned_cols=193 Identities=22% Similarity=0.293 Sum_probs=151.5
Q ss_pred cccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhhh
Q 043053 288 ATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLL 367 (1058)
Q Consensus 288 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 367 (1058)
+.++..+.+..+.+.+. ..+..+++|+.|++++|.++.. ..+..+++|+.|++++|++++..+ +..+++|++|+
T Consensus 23 l~~~~~~~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~ 96 (291)
T 1h6t_A 23 FAETIKDNLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLF 96 (291)
T ss_dssp HHHHHHHHTTCSCTTSE--ECHHHHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred HHHHHHHHhcCCCcccc--cchhhcCcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEE
Confidence 34556666776666654 2345677777777777777755 247778888888888888886444 77888888888
Q ss_pred ccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCC
Q 043053 368 LISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQG 447 (1058)
Q Consensus 368 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 447 (1058)
+++|.+++. ..+..+++|++|+|++|+|+++ ..+..+++|++|++++|++++. ..+..+++|+.|++++|++++
T Consensus 97 l~~n~l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~ 170 (291)
T 1h6t_A 97 LDENKVKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 170 (291)
T ss_dssp CCSSCCCCG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC
T ss_pred CCCCcCCCC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCcccc
Confidence 888888752 3488889999999999998875 4688889999999999999865 578888999999999999987
Q ss_pred CCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCC
Q 043053 448 SLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGP 496 (1058)
Q Consensus 448 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 496 (1058)
..+ +..+++|+.|++++|++++ ++ .+..+++|+.|+|++|++...
T Consensus 171 ~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 171 IVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEECC
T ss_pred chh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccCC
Confidence 554 8889999999999999985 44 488889999999999998753
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=4.6e-19 Score=212.70 Aligned_cols=199 Identities=22% Similarity=0.278 Sum_probs=122.9
Q ss_pred cccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhhh
Q 043053 288 ATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLL 367 (1058)
Q Consensus 288 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 367 (1058)
+..+..+++..+.+.+..+ +..+.+|+.|++.+|.+... + .+..+++|+.|+|++|+|.+..+ +..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 3445566666666654432 44556666666666666543 2 46666677777777777665333 56666666667
Q ss_pred ccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCC
Q 043053 368 LISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQG 447 (1058)
Q Consensus 368 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 447 (1058)
|++|.|++. ..+..+++|+.|+|++|+|+++ ..+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|+|++
T Consensus 94 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 94 LDENKIKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp CCSSCCCCC--TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC
T ss_pred CcCCCCCCC--hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC
Confidence 776666642 2566667777777777777654 3466667777777777776644 456666677777777777765
Q ss_pred CCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCccc
Q 043053 448 SLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLG 502 (1058)
Q Consensus 448 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 502 (1058)
..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++.+.....+.
T Consensus 168 ~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~ 218 (605)
T 1m9s_A 168 IVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQS 218 (605)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCS
T ss_pred chh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccc
Confidence 444 66667777777777766642 2466666666666666666654333333
No 358
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=2.7e-19 Score=187.31 Aligned_cols=157 Identities=20% Similarity=0.225 Sum_probs=75.9
Q ss_pred chhhccCCccCCCCc-cccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccC
Q 043053 436 QMIDLSHNTLQGSLP-NSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSS 514 (1058)
Q Consensus 436 ~~L~l~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~ 514 (1058)
+.|+|++|+|++..+ ..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 35 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 114 (220)
T 2v70_A 35 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRS 114 (220)
T ss_dssp SEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTT
T ss_pred CEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCC
Confidence 344444444443322 2344444444444444444443344444444444444444444444444455555555555555
Q ss_pred CcccCCCChhhhhhHHHHHHHhhccCCCCCCCCccccccccccEEecCCCcccCC-CCcccccCcceeEEEecccccccC
Q 043053 515 NQLTGSVPMELGQIEALEIALNLSCNGLTGPIPAQISALNKLSILDLSHNKLEGN-LNPLAQLDNLVSLNISYNKFTGYL 593 (1058)
Q Consensus 515 N~l~~~~p~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~l~~L~~L~l~~N~l~~~~ 593 (1058)
|+|++..| ..|.++++|+.|+|++|+|++. +..+..+++|+.|++++|+|+|.+
T Consensus 115 N~l~~~~~-------------------------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 115 NRITCVGN-------------------------DSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SCCCCBCT-------------------------TSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CcCCeECH-------------------------hHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 55443222 2234445555555555555554 244555666777777777777776
Q ss_pred CCccccccCCCccc-cCCcccccCCC
Q 043053 594 PDNKLFRQLSPTDL-AGNEGLCSSRK 618 (1058)
Q Consensus 594 ~~~~~~~~~~~~~~-~~n~~~c~~~~ 618 (1058)
+..+...++..... .++ ..|..|.
T Consensus 170 ~l~~l~~~~~~~~~~~~~-~~C~~P~ 194 (220)
T 2v70_A 170 YLAWLGEWLRKKRIVTGN-PRCQKPY 194 (220)
T ss_dssp GGHHHHHHHHHSCCBCCC-CEEEESG
T ss_pred chHHHHHHHHhcCccccC-CccCCCh
Confidence 65444333332222 333 3566553
No 359
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=7.4e-19 Score=183.93 Aligned_cols=152 Identities=20% Similarity=0.270 Sum_probs=121.1
Q ss_pred hhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCc
Q 043053 365 KLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNT 444 (1058)
Q Consensus 365 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 444 (1058)
.+++++|.++ .+|..+. ++|+.|+|++|+|+++.+..|..+++|++|+|++|+|+++.|..|..+++|+.|+|++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 4455555555 3444333 567888888888887777778888888888888888887778888888888888888888
Q ss_pred cCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCcccC
Q 043053 445 LQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTG 519 (1058)
Q Consensus 445 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 519 (1058)
|+++.+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 887766778888888888888888887778888888888888888888888777888888999999999999874
No 360
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=2.1e-19 Score=203.70 Aligned_cols=177 Identities=24% Similarity=0.184 Sum_probs=136.1
Q ss_pred cccccccccccccCcccccccccchhhhccccCCCCCCCCCcc-CCCCCcEEEccCccccCCccccccCccccceeeccC
Q 043053 340 QALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIG-NCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSS 418 (1058)
Q Consensus 340 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 418 (1058)
+.+++++|+++ .+|..+. ..++.|+|++|+|++..+..|. ++++|+.|+|++|+|+++.+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 46777777777 3565544 3477788888888777777776 788888888888888887777888888888888888
Q ss_pred ccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccc---cccccccccccccccCCC
Q 043053 419 NRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASL---GRLVSLNKIILSKNLFSG 495 (1058)
Q Consensus 419 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~Ls~N~l~~ 495 (1058)
|+|+++.+..|..+++|+.|+|++|+|+++.|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 88887777778888888888888888887777888888888888888888875444445 567888888888888886
Q ss_pred CCCCcccCCcc--cccccccCCcccC
Q 043053 496 PIPSSLGLCSS--LQLLDLSSNQLTG 519 (1058)
Q Consensus 496 ~~~~~~~~l~~--L~~L~l~~N~l~~ 519 (1058)
..+..|..++. |+.|+|++|++..
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred cCHHHhhhccHhhcceEEecCCCccC
Confidence 66667777776 4788999998874
No 361
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=8e-19 Score=183.64 Aligned_cols=156 Identities=21% Similarity=0.240 Sum_probs=129.1
Q ss_pred hhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCcc-ccccCccccceeeccCccCCCCCCCcccCCcccchhhccC
Q 043053 364 TKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIP-REIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSH 442 (1058)
Q Consensus 364 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~ 442 (1058)
+.+++++|.++. +|..+. ..+++|+|++|+|+++.+ ..|..+++|++|+|++|+|+++.+..|..+++|+.|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 356666666663 444443 346788888888887744 4578888899999999988888888888889999999999
Q ss_pred CccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCcccCCCC
Q 043053 443 NTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVP 522 (1058)
Q Consensus 443 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 522 (1058)
|+|+++.+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|++++|++.+..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99988888888999999999999999988888889999999999999999998889999999999999999999986544
No 362
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.76 E-value=7.9e-19 Score=210.64 Aligned_cols=194 Identities=25% Similarity=0.344 Sum_probs=170.5
Q ss_pred ccchhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEE
Q 043053 311 MLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRL 390 (1058)
Q Consensus 311 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 390 (1058)
.+.++..+.+..+.+....+ +..+++|+.|++++|.+.. ++ .+..+++|+.|+|++|.|++..+ +..+++|+.|
T Consensus 19 ~l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L 92 (605)
T 1m9s_A 19 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWL 92 (605)
T ss_dssp HHHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEE
T ss_pred HHHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEE
Confidence 45667788888888886543 6789999999999999985 44 58889999999999999997655 9999999999
Q ss_pred EccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccc
Q 043053 391 RVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFS 470 (1058)
Q Consensus 391 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 470 (1058)
+|++|+|+++ ..+..+++|++|+|++|+|++. ..+..+++|+.|+|++|+|+++ ..+..+++|+.|+|++|+|+
T Consensus 93 ~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~ 166 (605)
T 1m9s_A 93 FLDENKIKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIS 166 (605)
T ss_dssp ECCSSCCCCC--TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCC
T ss_pred ECcCCCCCCC--hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCC
Confidence 9999999975 3799999999999999999864 4689999999999999999975 67999999999999999999
Q ss_pred cCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCcccCC
Q 043053 471 GQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGS 520 (1058)
Q Consensus 471 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 520 (1058)
+..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++.
T Consensus 167 ~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 167 DIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred Cchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 7666 89999999999999999864 4689999999999999999854
No 363
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.76 E-value=8.4e-19 Score=198.66 Aligned_cols=160 Identities=26% Similarity=0.239 Sum_probs=138.9
Q ss_pred hhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCcccccc-CccccceeeccCccCCCCCCCcccCCcccchhhccC
Q 043053 364 TKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIG-GLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSH 442 (1058)
Q Consensus 364 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~ 442 (1058)
+.+++++|.++. +|..+. ..++.|+|++|+|+++.+..|. .+++|++|+|++|+|+++.+..|..+++|+.|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 578899999984 666554 4689999999999999888888 999999999999999988888999999999999999
Q ss_pred CccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcc---cCCcccccccccCCcccC
Q 043053 443 NTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSL---GLCSSLQLLDLSSNQLTG 519 (1058)
Q Consensus 443 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~L~l~~N~l~~ 519 (1058)
|+|+++.+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99998888889999999999999999998888999999999999999999997665556 568999999999999985
Q ss_pred CCChhhh
Q 043053 520 SVPMELG 526 (1058)
Q Consensus 520 ~~p~~~~ 526 (1058)
..+..+.
T Consensus 178 l~~~~~~ 184 (361)
T 2xot_A 178 LPLTDLQ 184 (361)
T ss_dssp CCHHHHH
T ss_pred cCHHHhh
Confidence 4334443
No 364
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=1.4e-18 Score=214.00 Aligned_cols=223 Identities=22% Similarity=0.281 Sum_probs=129.3
Q ss_pred CcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeec
Q 043053 337 SNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDL 416 (1058)
Q Consensus 337 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 416 (1058)
+.++.|+|.+|.+.. .+. ..|+.++|+.|.|. .+++..|++. ..+..|..++.|+.|+|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~-----~~l~~l~Ls~~~i~--------------~~~~~~n~~~-~~~~~~~~l~~L~~L~L 231 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQ-----ALLQHKKLSQYSID--------------EDDDIENRMV-MPKDSKYDDQLWHALDL 231 (727)
T ss_dssp ----------------------------------------------------------------------CCCCCCEEEC
T ss_pred CccceEEeeCCCCCc-chh-----hHhhcCccCccccc--------------Ccccccccee-cChhhhccCCCCcEEEC
Confidence 345666666666653 221 12344445554443 2345556665 56788999999999999
Q ss_pred cCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCC
Q 043053 417 SSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGP 496 (1058)
Q Consensus 417 s~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 496 (1058)
++|.+. .+|..+..+++|+.|+|++|.|+ .+|..|+++++|++|+|++|+|+ .+|..|..+.+|+.|+|++|.|+ .
T Consensus 232 s~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~ 307 (727)
T 4b8c_D 232 SNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-T 307 (727)
T ss_dssp TTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-C
T ss_pred CCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-c
Confidence 999998 66777779999999999999999 68889999999999999999999 78999999999999999999998 6
Q ss_pred CCCcccCCcccccccccCCcccCCCChhhhhhHHHHHHHhhccCCCCCCCCccccccccccEEecCCC--------cccC
Q 043053 497 IPSSLGLCSSLQLLDLSSNQLTGSVPMELGQIEALEIALNLSCNGLTGPIPAQISALNKLSILDLSHN--------KLEG 568 (1058)
Q Consensus 497 ~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l~~L~~L~L~~N--------~l~~ 568 (1058)
+|..|..+++|+.|+|++|+|++.+|..+..+......++|++|.+++.+|.. |+.|++++| .|.+
T Consensus 308 lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~ 381 (727)
T 4b8c_D 308 LPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQ 381 (727)
T ss_dssp CCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------------------
T ss_pred cChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccc
Confidence 78889999999999999999999999999887776667999999999988764 667888888 2222
Q ss_pred CC-CcccccCcceeEEEeccccc
Q 043053 569 NL-NPLAQLDNLVSLNISYNKFT 590 (1058)
Q Consensus 569 ~~-~~~~~l~~L~~L~l~~N~l~ 590 (1058)
.. ..+..+..+....+++|.+.
T Consensus 382 ~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 382 STEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp --------------------CCC
T ss_pred cccchhhcccccceeeeeccccc
Confidence 11 12334455555666666654
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.75 E-value=3.4e-20 Score=221.22 Aligned_cols=217 Identities=19% Similarity=0.196 Sum_probs=157.9
Q ss_pred cccCCcceeecccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccc
Q 043053 262 GGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQA 341 (1058)
Q Consensus 262 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 341 (1058)
..+++|+.|+|++|.++ .+|..++++++|+.|++++|... ..+..+ +..+++.+..|..+..+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l----------~~l~~l-l~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCL----------LTIILL-MRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHH----------HHHHHH-HHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhh----------hhHHHH-HHhcccccCCHHHHHHHHhccc
Confidence 55778888888888887 67888888888888888666421 111111 1122344566778888888888
Q ss_pred cc-cccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCcc
Q 043053 342 LD-LSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNR 420 (1058)
Q Consensus 342 L~-Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 420 (1058)
|+ ++.|.+ .+|+.+.+++|.|+...+ ..|+.|+|++|+|+++ |. |+.+++|+.|+|++|+
T Consensus 414 L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~l-p~-~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 414 VDPMRAAYL-----------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVL-CH-LEQLLLVTHLDLSHNR 474 (567)
T ss_dssp HCGGGHHHH-----------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSC-CC-GGGGTTCCEEECCSSC
T ss_pred Ccchhhccc-----------chhhhhhhhcccccccCc------cCceEEEecCCCCCCC-cC-ccccccCcEeecCccc
Confidence 88 676654 356777778887764322 2478888888888875 44 8888888888888888
Q ss_pred CCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCC-cccccccccccccccccccCCCCCCC
Q 043053 421 LSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQI-PASLGRLVSLNKIILSKNLFSGPIPS 499 (1058)
Q Consensus 421 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~ 499 (1058)
|+ .+|..|+.+++|+.|+|++|+|++ +| .|+.+++|+.|+|++|+|++.. |..+..+++|+.|+|++|+|++.+|.
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred cc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 88 667788888888888888888886 55 7888888888888888888766 78888888888888888888765543
Q ss_pred c---ccCCcccccccc
Q 043053 500 S---LGLCSSLQLLDL 512 (1058)
Q Consensus 500 ~---~~~l~~L~~L~l 512 (1058)
. +..+++|+.|++
T Consensus 552 ~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 552 QERLAEMLPSVSSILT 567 (567)
T ss_dssp TTHHHHHCTTCSEEEC
T ss_pred HHHHHHHCcccCccCC
Confidence 2 233677777753
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.75 E-value=5.4e-20 Score=219.54 Aligned_cols=217 Identities=19% Similarity=0.212 Sum_probs=168.3
Q ss_pred cCcCCccEEEeecCCCcCcCCccccccCCcceeecccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhh
Q 043053 238 GNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTV 317 (1058)
Q Consensus 238 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 317 (1058)
..+++|+.|+|++|+++ .+|..++.+++|+.|++++|... ..+..+ +..+.+.+..|..++.+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l----------~~l~~l-l~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCL----------LTIILL-MRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHH----------HHHHHH-HHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhh----------hhHHHH-HHhcccccCCHHHHHHHHhccc
Confidence 67899999999999998 78999999999999999776421 011111 1122334566777888888888
Q ss_pred hh-ccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCcc
Q 043053 318 FF-AWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNR 396 (1058)
Q Consensus 318 L~-l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 396 (1058)
|+ +..|.+ .+|+.+.+++|.++...+ ..|+.|+|++|.|++ +|. |+.+++|+.|+|++|+
T Consensus 414 L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 414 VDPMRAAYL-----------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNR 474 (567)
T ss_dssp HCGGGHHHH-----------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSC
T ss_pred Ccchhhccc-----------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccc
Confidence 87 555543 467778888888874322 247889999999986 565 8999999999999999
Q ss_pred ccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCC-ccccccCCCCCeeecCCCccccCCcc
Q 043053 397 IAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSL-PNSLSSLSGLQVLDVSDNRFSGQIPA 475 (1058)
Q Consensus 397 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~ 475 (1058)
|+ .+|..|+.+++|++|+|++|+|++ +| .++.+++|+.|+|++|+|++.. |..|+.+++|+.|+|++|+|++.+|.
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred cc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 99 457789999999999999999986 56 7899999999999999999876 88999999999999999999876553
Q ss_pred c---cccccccccccc
Q 043053 476 S---LGRLVSLNKIIL 488 (1058)
Q Consensus 476 ~---~~~l~~L~~L~L 488 (1058)
. +..+++|+.|+|
T Consensus 552 ~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 552 QERLAEMLPSVSSILT 567 (567)
T ss_dssp TTHHHHHCTTCSEEEC
T ss_pred HHHHHHHCcccCccCC
Confidence 2 234778887754
No 367
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.75 E-value=4.2e-18 Score=179.44 Aligned_cols=156 Identities=24% Similarity=0.247 Sum_probs=122.4
Q ss_pred chhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccC
Q 043053 363 LTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSH 442 (1058)
Q Consensus 363 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~ 442 (1058)
-+.++.+++.+. .+|..+. ++|+.|+|++|+|+++.|..|..+++|++|+|++|+|+.+.+..|..+++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 344555556555 3444333 6788888888888887777888888888888888888766667778888888888888
Q ss_pred CccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCcccCCCC
Q 043053 443 NTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVP 522 (1058)
Q Consensus 443 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 522 (1058)
|+|+++.+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|++++|++.+..+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 8888777777888888888888888887 677888888888888888888887777788889999999999999986543
No 368
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.74 E-value=5.9e-18 Score=178.29 Aligned_cols=153 Identities=25% Similarity=0.318 Sum_probs=132.2
Q ss_pred ccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccC
Q 043053 339 LQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSS 418 (1058)
Q Consensus 339 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 418 (1058)
-+.+++++++++ .+|..+. ++|++|+|++|.|++..|..|.++++|+.|+|++|+|+.+.+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 456888888887 4666554 7888999999999988888899999999999999999888888889999999999999
Q ss_pred ccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCC
Q 043053 419 NRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSG 495 (1058)
Q Consensus 419 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 495 (1058)
|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 9999888888889999999999999998 477888999999999999999987777788889999999999999874
No 369
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.74 E-value=3.6e-18 Score=183.37 Aligned_cols=148 Identities=21% Similarity=0.190 Sum_probs=107.9
Q ss_pred ccccceeccccceEEEEEEe-cCCcE--EEEEecCcccccccC---------CCC----CcccchHHHHHHHHHHHcccC
Q 043053 706 LVDANVIGKGCSGVVYRADM-DNGEV--IAVKKLWPTTMAAAN---------GCS----DEKSGVRDSFSAEIKTLGSIR 769 (1058)
Q Consensus 706 ~~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~~~---------~~~----~~~~~~~~~~~~E~~~l~~l~ 769 (1058)
|.+.+.||+|+||.||+|.. .+|+. ||||++......... ... .........+.+|+..+.++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999965 77999 999987543211000 000 001112347889999999999
Q ss_pred CCcc--cceeeEEEcCCCceEEEEecCC-C----ChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhccc-ccCCCCeEeCC
Q 043053 770 HKNI--VRFLGCCWNRNNRLLMYDYMPN-G----SLGSLLHERTGNALEWELRYQILLGAAQGLAYLH-HDCVPPIVHRD 841 (1058)
Q Consensus 770 h~ni--v~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~ivHrD 841 (1058)
|+++ ..++++ ...++||||+.+ | +|.++... .++..+..++.|++.|++||| +. +|||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~---givHrD 196 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEA---ELVHAD 196 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTS---CEECSS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHC---CEEeCC
Confidence 8864 334432 367999999942 4 56655432 234567789999999999999 88 999999
Q ss_pred CCCCcEEEcCCCCeeeeccccceecc
Q 043053 842 IKANNILIGLEFEPYIADFGLAKLVD 867 (1058)
Q Consensus 842 ikp~Nill~~~~~~kl~DfGl~~~~~ 867 (1058)
|||+|||++. .++|+|||+|....
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEETT
T ss_pred CCHHHEEEcC--cEEEEECcccccCC
Confidence 9999999998 99999999997653
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=1.8e-18 Score=186.26 Aligned_cols=169 Identities=24% Similarity=0.358 Sum_probs=79.4
Q ss_pred ccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhh
Q 043053 287 NATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKL 366 (1058)
Q Consensus 287 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 366 (1058)
.+.+++.+++++|.++++. .+..+++|+.|++++|+++.. + .+..+++|+.|+|++|++++..+ +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 3445555666666655442 344445555555555554432 2 34455555555555555553222 4444555555
Q ss_pred hccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccC
Q 043053 367 LLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQ 446 (1058)
Q Consensus 367 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 446 (1058)
+|++|++++. +. +.. ++|+.|+|++|+|+++ ..+..+++|++|+|++|+|++. + .+..+++|+.|++++|+++
T Consensus 91 ~L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKNL-NG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSCC-TT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCCc-Cc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 5555555432 11 111 4455555555555443 1344445555555555554432 1 3444444555555555444
Q ss_pred CCCccccccCCCCCeeecCCCccc
Q 043053 447 GSLPNSLSSLSGLQVLDVSDNRFS 470 (1058)
Q Consensus 447 ~~~~~~~~~l~~L~~L~L~~N~l~ 470 (1058)
+. ..+..+++|+.|++++|+++
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEE
T ss_pred ch--HHhccCCCCCEEeCCCCccc
Confidence 33 33444444444444444444
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=3.8e-18 Score=183.75 Aligned_cols=170 Identities=25% Similarity=0.309 Sum_probs=97.5
Q ss_pred ccchhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEE
Q 043053 311 MLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRL 390 (1058)
Q Consensus 311 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 390 (1058)
.+.++..+++.+|.+++.. .+..+++|+.|++++|+++. ++ .+..+++|++|+|++|+|++..+ +.++++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4566667777777776543 46666777777777777663 33 45556666666666666664333 5566666666
Q ss_pred EccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccc
Q 043053 391 RVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFS 470 (1058)
Q Consensus 391 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 470 (1058)
+|++|+|+++.+ +.. ++|++|+|++|++++. ..+..+++|+.|++++|+|++. + .+..+++|++|++++|+++
T Consensus 91 ~L~~N~l~~l~~--~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKNLNG--IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSCCTT--CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCCcCc--ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 666666655422 222 5566666666666532 2355555666666666665543 2 4555555666666666555
Q ss_pred cCCcccccccccccccccccccCCC
Q 043053 471 GQIPASLGRLVSLNKIILSKNLFSG 495 (1058)
Q Consensus 471 ~~~~~~~~~l~~L~~L~Ls~N~l~~ 495 (1058)
+. ..+..+++|+.|+|++|++.+
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred ch--HHhccCCCCCEEeCCCCcccC
Confidence 43 445555555555555555553
No 372
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=1.5e-18 Score=194.10 Aligned_cols=102 Identities=11% Similarity=0.130 Sum_probs=54.5
Q ss_pred cccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccc-eeeccCccCCCCCCCcccCCcccchh
Q 043053 360 LQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLN-FLDLSSNRLSGSVPDEIGDCTELQMI 438 (1058)
Q Consensus 360 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L 438 (1058)
+++|++|+|++|+++.+.+.+|.+|++|+.|+|.+| ++.+.+.+|.++.+|+ .+++.+ .++.+.+.+|.++++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 445555555555555444455555555555555555 5545555555555555 555555 4444445555555555555
Q ss_pred hccCCccCCCCccccccCCCCCeee
Q 043053 439 DLSHNTLQGSLPNSLSSLSGLQVLD 463 (1058)
Q Consensus 439 ~l~~N~l~~~~~~~~~~l~~L~~L~ 463 (1058)
++++|+++.+.+.+|.++++|+.++
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EeCCCccCccchhhhcCCcchhhhc
Confidence 5555555544445555555555544
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=1.5e-17 Score=171.00 Aligned_cols=151 Identities=19% Similarity=0.276 Sum_probs=85.5
Q ss_pred cccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhh
Q 043053 360 LQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMID 439 (1058)
Q Consensus 360 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 439 (1058)
+++|++|++++|.++ .+| .+..+++|++|++++|.++.. ..+..+++|++|++++|++++..+..++.+++|+.|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNY--NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCC--GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcc--hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 344444444444444 222 355555555555555554432 3455566666666666666554555566666666666
Q ss_pred ccCCccCCCCccccccCCCCCeeecCCCc-cccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCccc
Q 043053 440 LSHNTLQGSLPNSLSSLSGLQVLDVSDNR-FSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLT 518 (1058)
Q Consensus 440 l~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 518 (1058)
+++|++++..+..+..+++|++|++++|+ ++ .+| .+..+++|+.|++++|++++. + .+..+++|+.|++++|++.
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC---
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCcccC
Confidence 66666665555666666666666666665 43 333 466666666666666666642 2 5666667777777777664
No 374
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=1.4e-17 Score=171.18 Aligned_cols=155 Identities=21% Similarity=0.306 Sum_probs=111.2
Q ss_pred hhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccc
Q 043053 333 LASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLN 412 (1058)
Q Consensus 333 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 412 (1058)
...+++|+.|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|++++..+..|..+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 356667777777777777 344 56677777777777776652 23677777888888888888776677777888888
Q ss_pred eeeccCccCCCCCCCcccCCcccchhhccCCc-cCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccc
Q 043053 413 FLDLSSNRLSGSVPDEIGDCTELQMIDLSHNT-LQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKN 491 (1058)
Q Consensus 413 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 491 (1058)
+|+|++|++++..+..+..+++|+.|++++|+ ++. +| .+..+++|++|++++|++++ ++ .+..+++|+.|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD-IM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-CG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccc-cH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCc
Confidence 88888888876667777778888888888887 654 44 57778888888888888874 33 6777788888888888
Q ss_pred cCCC
Q 043053 492 LFSG 495 (1058)
Q Consensus 492 ~l~~ 495 (1058)
+|.+
T Consensus 192 ~i~~ 195 (197)
T 4ezg_A 192 TIGG 195 (197)
T ss_dssp ----
T ss_pred ccCC
Confidence 7753
No 375
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=3.3e-18 Score=191.23 Aligned_cols=283 Identities=13% Similarity=0.067 Sum_probs=183.4
Q ss_pred CCCcceeecccccccCCCCccccC-cCCccEEEeecCCCc--CcCCccccccCCcceeecccCccCCCccccccc-----
Q 043053 216 LKKLEELFLWQNSLVGAIPEEIGN-CTSLKMIDFSLNSLS--GTIPLSIGGLSELEEFMISDNNVSGSIPANLAN----- 287 (1058)
Q Consensus 216 l~~L~~L~L~~n~l~~~~~~~l~~-l~~L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~----- 287 (1058)
+.+|+.|.++++ +.......+.. +++|+.|||++|++. ..... .++.+..+.+..|.| ....|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I---~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFV---PAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEE---CTTTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccc---ccccccccccccccc---CHHHhccccccc
Confidence 677888888865 22111123333 678899999998887 22222 222344555555533 3456666
Q ss_pred ---cccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccccccccccc----cccCccccccc
Q 043053 288 ---ATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSL----TASVPAGLFQL 360 (1058)
Q Consensus 288 ---l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l----~~~~~~~~~~l 360 (1058)
+++|+.|+|.+ .++.+.+.+|.++++|+.+++.+|.+..+.+.+|.++.++..+.+..+.. ......+|..+
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~ 175 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEG 175 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEES
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccc
Confidence 78888888877 77777777788888888888877777777777777777777666655322 22223334444
Q ss_pred ccch-hhhccccCCCCCCCC----CccCCCCCcEEEccCccccCCccccc-cCccccceeeccCccCCCCCCCcccCCcc
Q 043053 361 QNLT-KLLLISNDISGSIPP----EIGNCSSLVRLRVGNNRIAGLIPREI-GGLKTLNFLDLSSNRLSGSVPDEIGDCTE 434 (1058)
Q Consensus 361 ~~L~-~L~L~~N~l~~~~~~----~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 434 (1058)
.+|+ .+.+.... .++. .--...++..+.+.++-.. .....+ ..+++|+.|+|++|+++.+.+.+|.++++
T Consensus 176 ~~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~ 251 (329)
T 3sb4_A 176 EPLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKY 251 (329)
T ss_dssp CCCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTT
T ss_pred cccceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCC
Confidence 4444 22221110 0000 0011334455555543211 111111 23678888888888888777788888888
Q ss_pred cchhhccCCccCCCCccccccCCCCC-eeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCcccccccc
Q 043053 435 LQMIDLSHNTLQGSLPNSLSSLSGLQ-VLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDL 512 (1058)
Q Consensus 435 L~~L~l~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 512 (1058)
|+.|+|.+| ++.+.+.+|.++.+|+ .|++.+ .++...+.+|.++.+|+.|+|++|.+..+.+.+|.++++|+.++.
T Consensus 252 L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 252 LLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred CCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 888888888 7777778888888888 888887 676666788888888888888888888788888888888888763
No 376
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.69 E-value=4.3e-18 Score=209.71 Aligned_cols=224 Identities=24% Similarity=0.210 Sum_probs=80.3
Q ss_pred chhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEc
Q 043053 313 SKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRV 392 (1058)
Q Consensus 313 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 392 (1058)
+.++.|.+.+|.+... +. ..|+.++|+.|.|.+ +++..|.+. ..+..|..+++|+.|+|
T Consensus 173 ~~~~~l~L~~n~~~~~-~~-----~~l~~l~Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~L 231 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-NQ-----ALLQHKKLSQYSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALDL 231 (727)
T ss_dssp ----------------------------------------------------------------------CCCCCCEEEC
T ss_pred CccceEEeeCCCCCcc-hh-----hHhhcCccCcccccC--------------cccccccee-cChhhhccCCCCcEEEC
Confidence 5678889988888863 22 235556666666553 233344444 44555555566666666
Q ss_pred cCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccC
Q 043053 393 GNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQ 472 (1058)
Q Consensus 393 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 472 (1058)
++|.|..+ |..+..+++|++|+|++|.|+ .+|..|+.+++|+.|+|++|+|+ .+|..|+++++|++|+|++|.|+ .
T Consensus 232 s~n~l~~l-~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~ 307 (727)
T 4b8c_D 232 SNLQIFNI-SANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-T 307 (727)
T ss_dssp TTSCCSCC-CGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-C
T ss_pred CCCCCCCC-ChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-c
Confidence 66666533 333335566666666666665 45555566666666666666665 34555666666666666666664 4
Q ss_pred CcccccccccccccccccccCCCCCCCcccCCcc-cccccccCCcccCCCChhhhhhHHHHHHHhhccC--------CCC
Q 043053 473 IPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSS-LQLLDLSSNQLTGSVPMELGQIEALEIALNLSCN--------GLT 543 (1058)
Q Consensus 473 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~l~~N~l~~~~p~~~~~l~~l~~~l~ls~N--------~l~ 543 (1058)
+|..|+.+++|+.|+|++|+|++.+|..+..+.. +..|+|++|.+++.+|..+.. +++++| .|.
T Consensus 308 lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~-------l~l~~n~~~~~~~~~l~ 380 (727)
T 4b8c_D 308 LPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRF-------IEINTDGEPQREYDSLQ 380 (727)
T ss_dssp CCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------------------
T ss_pred cChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccce-------eEeecccccccccCCcc
Confidence 5555666666666666666666555555443321 123556666666665554432 223333 444
Q ss_pred CCCCccccccccccEEecCCCcccC
Q 043053 544 GPIPAQISALNKLSILDLSHNKLEG 568 (1058)
Q Consensus 544 ~~~~~~~~~l~~L~~L~L~~N~l~~ 568 (1058)
+..+..+..+.+++...+++|-+.+
T Consensus 381 ~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 381 QSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp ---------------------CCCG
T ss_pred ccccchhhcccccceeeeecccccc
Confidence 4555556677777888888887753
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.68 E-value=4e-17 Score=166.75 Aligned_cols=132 Identities=25% Similarity=0.314 Sum_probs=102.3
Q ss_pred cEEEccCccccCCccccccCccccceeeccCccCCCCCCC-cccCCcccchhhccCCccCCCCccccccCCCCCeeecCC
Q 043053 388 VRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPD-EIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSD 466 (1058)
Q Consensus 388 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~ 466 (1058)
+.+++++|+++.+ |..+. .+|++|+|++|+|++..+. .|..+++|+.|+|++|+|+++.|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~~i-p~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKEI-PRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSSC-CSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCcC-ccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 6788888888755 43332 2788888888888766664 477888888888888888877788888888888888888
Q ss_pred CccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCcccCCCC
Q 043053 467 NRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVP 522 (1058)
Q Consensus 467 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 522 (1058)
|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|++++|++++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 88887777778888888888888888887777788888888888888888876544
No 378
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.67 E-value=1.4e-16 Score=162.77 Aligned_cols=131 Identities=24% Similarity=0.363 Sum_probs=120.7
Q ss_pred hhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccc-cccCccccceeeccCccCCCCCCCcccCCcccchhhccC
Q 043053 364 TKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPR-EIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSH 442 (1058)
Q Consensus 364 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~ 442 (1058)
+.+++++|.++ .+|..+.. +|++|++++|+|+++.+. .|..+++|++|+|++|+|++..|..|..+++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 67899999997 56665543 899999999999988775 599999999999999999999999999999999999999
Q ss_pred CccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCC
Q 043053 443 NTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPI 497 (1058)
Q Consensus 443 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 497 (1058)
|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|++.+..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 9999988889999999999999999999999999999999999999999998643
No 379
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.65 E-value=3.4e-16 Score=178.55 Aligned_cols=269 Identities=10% Similarity=0.098 Sum_probs=117.1
Q ss_pred CCccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCcCCccccccCCcceeec
Q 043053 193 SELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMI 272 (1058)
Q Consensus 193 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 272 (1058)
..++.+.+.+ .++.+....|.++ +|+.+.+..+ +.......|.++ +|+.+++.. .+..+....|.++++|+.+++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 4455555543 2332334445543 4566655543 443334444442 455555543 333333444444444444444
Q ss_pred ccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCccccccccccccccc
Q 043053 273 SDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTAS 352 (1058)
Q Consensus 273 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 352 (1058)
.+|.++ .+...+|. ..+|+.+.+.+ .++.+...+|.++++|+.+++..| ++.+
T Consensus 188 ~~n~l~------------------------~I~~~aF~-~~~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~~I 240 (401)
T 4fdw_A 188 SKTKIT------------------------KLPASTFV-YAGIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VSTI 240 (401)
T ss_dssp TTSCCS------------------------EECTTTTT-TCCCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CCEE
T ss_pred CCCcce------------------------EechhhEe-ecccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-ccCc
Confidence 444444 33333333 23333333332 233344445555555555555543 3322
Q ss_pred CcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCC
Q 043053 353 VPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDC 432 (1058)
Q Consensus 353 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 432 (1058)
...+|.+ .+|+.+.+ .|.++.+...+|.+|++|+.+++.+|.+.. +.+..+.+.+|.++
T Consensus 241 ~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~-------------------~~~~~I~~~aF~~c 299 (401)
T 4fdw_A 241 GQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFND-------------------DPEAMIHPYCLEGC 299 (401)
T ss_dssp CTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCC-------------------CTTCEECTTTTTTC
T ss_pred ccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccC-------------------CcccEECHHHhhCC
Confidence 2333333 34444444 233333444455555555555554444330 00002333344444
Q ss_pred cccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCc-cccccc
Q 043053 433 TELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCS-SLQLLD 511 (1058)
Q Consensus 433 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~ 511 (1058)
++|+.++|.+ .++.+...+|.++.+|+.++|..| ++.....+|.++ +|+.+++++|.+....+..|.+++ +++.|+
T Consensus 300 ~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~ 376 (401)
T 4fdw_A 300 PKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIR 376 (401)
T ss_dssp TTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEE
T ss_pred ccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEE
Confidence 4444444442 233333444444444444444332 333333444444 455555555444444444555442 455555
Q ss_pred ccCCcc
Q 043053 512 LSSNQL 517 (1058)
Q Consensus 512 l~~N~l 517 (1058)
+..|.+
T Consensus 377 vp~~~~ 382 (401)
T 4fdw_A 377 VPAESV 382 (401)
T ss_dssp ECGGGH
T ss_pred eCHHHH
Confidence 555543
No 380
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.64 E-value=1.2e-16 Score=177.07 Aligned_cols=149 Identities=13% Similarity=0.084 Sum_probs=102.1
Q ss_pred ccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCc---ccchHHH--------HHHHHHHHcccCCCccc
Q 043053 706 LVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDE---KSGVRDS--------FSAEIKTLGSIRHKNIV 774 (1058)
Q Consensus 706 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~---~~~~~~~--------~~~E~~~l~~l~h~niv 774 (1058)
|.+.+.||+|+||.||+|...+|+.||||+++............. ....... ..+|...+.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 788999999999999999888899999998764322110000000 0001111 23466666666544432
Q ss_pred ceeeEEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCC-
Q 043053 775 RFLGCCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEF- 853 (1058)
Q Consensus 775 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~- 853 (1058)
...-+. ....++||||++|++|..+... .....++.|++.+|.|||+. |||||||||.|||+++++
T Consensus 177 vp~p~~--~~~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 177 VPEPIA--QSRHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKD 243 (397)
T ss_dssp CCCEEE--EETTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEEC
T ss_pred CCeeee--ccCceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCC
Confidence 211111 1235899999999888766432 12356889999999999998 999999999999998876
Q ss_pred ---------Ceeeeccccceecc
Q 043053 854 ---------EPYIADFGLAKLVD 867 (1058)
Q Consensus 854 ---------~~kl~DfGl~~~~~ 867 (1058)
.+.|+||+-+....
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEETT
T ss_pred cccccccccceEEEEeCCcccCC
Confidence 38999999876543
No 381
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.63 E-value=6.1e-16 Score=176.41 Aligned_cols=271 Identities=13% Similarity=0.174 Sum_probs=189.0
Q ss_pred CCccceeeeeccccccccCccccCCCCccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEE
Q 043053 168 LSKLQTLSIYTTMISGEIPAEIGNCSELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMID 247 (1058)
Q Consensus 168 l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 247 (1058)
+..++.+.+-++ ++.....+|.++ +|+.+.+..+ ++.+....|.++ +|+.+.+.+ .+.......|.+|++|+.++
T Consensus 112 ~~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 112 LKGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp CSSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred cCCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 467777777654 444556678875 7999999877 665666778885 799999986 67767778899999999999
Q ss_pred eecCCCcCcCCccccccCCcceeecccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCC
Q 043053 248 FSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEG 327 (1058)
Q Consensus 248 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~ 327 (1058)
++.|.++.+....|. ..+|+.+.+.++ +..+...+|.++++|+.+++..| ++.+...+|.+ .+|+.+.+ .+.++.
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~ 261 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTN 261 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCE
T ss_pred cCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccE
Confidence 999999976667776 589999999854 77677788888888988888764 56566666665 55666655 334444
Q ss_pred CCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccC
Q 043053 328 SIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGG 407 (1058)
Q Consensus 328 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 407 (1058)
+...+|.++++|+.+++.+|.+. .+.+..+.+.+|.+|++|+.++|. |.++.+...+|.+
T Consensus 262 I~~~aF~~c~~L~~l~l~~~~~~-------------------~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~ 321 (401)
T 4fdw_A 262 IASRAFYYCPELAEVTTYGSTFN-------------------DDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGG 321 (401)
T ss_dssp ECTTTTTTCTTCCEEEEESSCCC-------------------CCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTT
T ss_pred EChhHhhCCCCCCEEEeCCcccc-------------------CCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcC
Confidence 55555666666666655555443 011113455667777777777777 3466666677777
Q ss_pred ccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCC-CCCeeecCCCccc
Q 043053 408 LKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLS-GLQVLDVSDNRFS 470 (1058)
Q Consensus 408 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~ 470 (1058)
+.+|+.++|..| ++.+.+.+|.++ +|+.+++++|.+..+.+..|.+++ +++.|++..|.+.
T Consensus 322 c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 322 NRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred CCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 777777777544 555666677777 777777777777666666666663 5667776666543
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.61 E-value=5.7e-16 Score=154.66 Aligned_cols=132 Identities=22% Similarity=0.246 Sum_probs=78.7
Q ss_pred CCCcEEEccCcccc-CCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeee
Q 043053 385 SSLVRLRVGNNRIA-GLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLD 463 (1058)
Q Consensus 385 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 463 (1058)
++|++|++++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|+.|++++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 45566666666665 34455556666666666666666544 4555666666666666666655555555566666666
Q ss_pred cCCCccccCCc-ccccccccccccccccccCCCCCC---CcccCCcccccccccCCccc
Q 043053 464 VSDNRFSGQIP-ASLGRLVSLNKIILSKNLFSGPIP---SSLGLCSSLQLLDLSSNQLT 518 (1058)
Q Consensus 464 L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~l~~N~l~ 518 (1058)
+++|++++..+ ..+..+++|+.|+|++|++++..+ ..+..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 66666654221 455666666666666666664433 35666666666666666665
No 383
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.60 E-value=9.5e-16 Score=153.03 Aligned_cols=131 Identities=21% Similarity=0.184 Sum_probs=67.8
Q ss_pred cchhhhccccCCC-CCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhc
Q 043053 362 NLTKLLLISNDIS-GSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDL 440 (1058)
Q Consensus 362 ~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 440 (1058)
+|++|++++|.++ +.+|..+..+++|++|++++|.|+++ ..|..+++|++|+|++|++++.+|..+..+++|+.|++
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 3344444444443 23344444445555555555555443 44555555555555555555444444445555555555
Q ss_pred cCCccCCCCc-cccccCCCCCeeecCCCccccCCc---ccccccccccccccccccCC
Q 043053 441 SHNTLQGSLP-NSLSSLSGLQVLDVSDNRFSGQIP---ASLGRLVSLNKIILSKNLFS 494 (1058)
Q Consensus 441 ~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~N~l~ 494 (1058)
++|+|++..+ ..+..+++|+.|++++|++++..+ ..+..+++|+.|++++|.+.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 5555554221 455566666666666666654333 35556666666666666655
No 384
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.59 E-value=5.1e-15 Score=169.75 Aligned_cols=331 Identities=13% Similarity=0.085 Sum_probs=150.0
Q ss_pred cCCccccCCCccceeeeeccccccccCccccCCCCccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccC
Q 043053 160 SLPASLGKLSKLQTLSIYTTMISGEIPAEIGNCSELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGN 239 (1058)
Q Consensus 160 ~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 239 (1058)
....+|.++.+|+.+.+..+ ++.....+|.+|++|+.++|.++ ++......|..+++|+.+.+..+ +.......|.+
T Consensus 62 Ig~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~ 138 (394)
T 4fs7_A 62 IGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKG 138 (394)
T ss_dssp ECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTT
T ss_pred hHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeec
Confidence 33444555555555555432 33333445555555555555433 33233344555555555554432 22233334444
Q ss_pred cCCccEEEeecCCCcCcCCccccccCCcceeecccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhh
Q 043053 240 CTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFF 319 (1058)
Q Consensus 240 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 319 (1058)
+..+...... .+.......|.++++|+.+.+.++. ..+....|.++.+|+.+++..| ++.+...+|.++..|+.+.
T Consensus 139 ~~~~~~~~~~--~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~ 214 (394)
T 4fs7_A 139 CDFKEITIPE--GVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENME 214 (394)
T ss_dssp CCCSEEECCT--TCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCC
T ss_pred ccccccccCc--cccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceee
Confidence 4322222211 1111223445555555555554432 2233444555555555555443 3334444455555544444
Q ss_pred ccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccC
Q 043053 320 AWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAG 399 (1058)
Q Consensus 320 l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 399 (1058)
+..+... +.+.+....+|+.+.+..+ ++.+...++..+.+|+.+.+..+... +....|..+..++.+....+.+.
T Consensus 215 ~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~- 289 (394)
T 4fs7_A 215 FPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP- 289 (394)
T ss_dssp CCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC-
T ss_pred cCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec-
Confidence 4333221 1122223344555544332 22233334444555555555444332 44445555555555555544332
Q ss_pred CccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccc
Q 043053 400 LIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGR 479 (1058)
Q Consensus 400 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 479 (1058)
...|.++.+|+.+.+..+ ++.+...+|.++++|+.++|.++ ++.+...+|.++.+|+.+++..| ++.....+|.+
T Consensus 290 --~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~ 364 (394)
T 4fs7_A 290 --EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQG 364 (394)
T ss_dssp --TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTT
T ss_pred --cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhC
Confidence 234555555555555443 33344455555555555555433 44444455555555555555544 44344445555
Q ss_pred cccccccccccccCCCCCCCcccCCccccc
Q 043053 480 LVSLNKIILSKNLFSGPIPSSLGLCSSLQL 509 (1058)
Q Consensus 480 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 509 (1058)
+.+|+.+++..+ +. .+..+|..+++|+.
T Consensus 365 C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 365 CINLKKVELPKR-LE-QYRYDFEDTTKFKW 392 (394)
T ss_dssp CTTCCEEEEEGG-GG-GGGGGBCTTCEEEE
T ss_pred CCCCCEEEECCC-CE-EhhheecCCCCCcE
Confidence 555555555443 11 12234555555543
No 385
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.58 E-value=7.2e-15 Score=168.45 Aligned_cols=319 Identities=13% Similarity=0.083 Sum_probs=250.9
Q ss_pred ccccccCccccCCCCccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEeecCCCcCcCCc
Q 043053 180 MISGEIPAEIGNCSELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPL 259 (1058)
Q Consensus 180 ~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~ 259 (1058)
.++.....+|.+|.+|+.+.|..+ ++.+....|.+|++|+.+++.++ +.......|.++++|+.+.+..+ +......
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~ 134 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVE 134 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTT
T ss_pred eEeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecce
Confidence 455566678999999999999754 66566778999999999999765 55566678999999999888755 4445566
Q ss_pred cccccCCcceeecccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCcccCCCCChhhhccCcc
Q 043053 260 SIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNL 339 (1058)
Q Consensus 260 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 339 (1058)
.|.++..++....... ..+...+|.++++|+.+.+.++ +..+...+|.++.+|+.+.+..| ++.+...+|..+..|
T Consensus 135 aF~~~~~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L 210 (394)
T 4fs7_A 135 AFKGCDFKEITIPEGV--TVIGDEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILL 210 (394)
T ss_dssp TTTTCCCSEEECCTTC--CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTC
T ss_pred eeecccccccccCccc--cccchhhhcccCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhcccccc
Confidence 7777655444433332 2245578999999999999765 45577889999999999999776 666777899999999
Q ss_pred cccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCc
Q 043053 340 QALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSN 419 (1058)
Q Consensus 340 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 419 (1058)
+.+.+..+... +...++...+|+.+.+..+ ++.+....|.++..|+.+.+..+... +....|..+..++.+....+
T Consensus 211 ~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~ 286 (394)
T 4fs7_A 211 ENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSV 286 (394)
T ss_dssp CBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSS
T ss_pred ceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCce
Confidence 99998877554 3344555678888888654 34466678999999999999887544 66788999999999998877
Q ss_pred cCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccCCCCCCC
Q 043053 420 RLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPS 499 (1058)
Q Consensus 420 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 499 (1058)
.+ ....|..+.+|+.+.+.++ ++.+...+|.++.+|+.++|.++ ++.....+|.++.+|+.+.+..| +..+...
T Consensus 287 ~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~ 360 (394)
T 4fs7_A 287 IV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGAN 360 (394)
T ss_dssp EE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTT
T ss_pred ee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHH
Confidence 54 3457888999999999876 66677789999999999999755 76566788999999999999887 7767788
Q ss_pred cccCCcccccccccCC
Q 043053 500 SLGLCSSLQLLDLSSN 515 (1058)
Q Consensus 500 ~~~~l~~L~~L~l~~N 515 (1058)
+|.+|.+|+.+++..+
T Consensus 361 aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 361 AFQGCINLKKVELPKR 376 (394)
T ss_dssp TBTTCTTCCEEEEEGG
T ss_pred HhhCCCCCCEEEECCC
Confidence 9999999999998754
No 386
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.58 E-value=2.6e-15 Score=153.25 Aligned_cols=126 Identities=26% Similarity=0.389 Sum_probs=59.1
Q ss_pred ccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCcc
Q 043053 341 ALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNR 420 (1058)
Q Consensus 341 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 420 (1058)
.+++++|+++ .+|..+. ++|++|+|++|.|+ .+|..|.++++|+.|+|++|+|+++.+..|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4555555555 2343322 34444444444444 333444444444555555554444444444444444444444444
Q ss_pred CCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccc
Q 043053 421 LSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFS 470 (1058)
Q Consensus 421 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 470 (1058)
|+++.|..|..+++|+.|+|++|+|+++.+..|..+++|+.|+|++|.+.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 44444444444444444444444444433334444444444444444443
No 387
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.57 E-value=4.6e-15 Score=151.38 Aligned_cols=128 Identities=27% Similarity=0.315 Sum_probs=90.9
Q ss_pred cEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCC
Q 043053 388 VRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDN 467 (1058)
Q Consensus 388 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N 467 (1058)
+.+++++|.|+.++ ..+. ++|++|+|++|+|+ .+|..|..+++|+.|+|++|+|+++.+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~~ip-~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLKVLP-KGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCSSCC-SCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCCcCC-CCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 45666666666543 2221 46777777777776 45566777777777777777777666667777777777777777
Q ss_pred ccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCcccC
Q 043053 468 RFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTG 519 (1058)
Q Consensus 468 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 519 (1058)
+|++..+..|..+++|+.|+|++|+|+...+..|..+++|+.|++++|++..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 7776666677777777777777777776666677788888888888888874
No 388
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.57 E-value=5.9e-15 Score=148.65 Aligned_cols=133 Identities=21% Similarity=0.273 Sum_probs=98.9
Q ss_pred CcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCC
Q 043053 387 LVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSD 466 (1058)
Q Consensus 387 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~ 466 (1058)
.+.+++++|+++.+... + .++|++|++++|++++..+..|..+++|+.|++++|+|+++.+..|..+++|++|++++
T Consensus 9 ~~~l~~~~~~l~~~p~~-~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVPTG-I--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSSCCTT-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCccCCCC-C--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 45677777777654322 2 25677777777777766666677777777777777777776666677788888888888
Q ss_pred CccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCcccCCCC
Q 043053 467 NRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLTGSVP 522 (1058)
Q Consensus 467 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 522 (1058)
|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|++.+..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 88876666667778888888888888887666677888899999999999886554
No 389
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.57 E-value=1.5e-15 Score=148.16 Aligned_cols=127 Identities=21% Similarity=0.252 Sum_probs=60.9
Q ss_pred CCCcEEEccCcccc-CCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeee
Q 043053 385 SSLVRLRVGNNRIA-GLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLD 463 (1058)
Q Consensus 385 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 463 (1058)
++|+.|++++|.++ +..|..+..+++|++|++++|.+++. ..+..+++|+.|++++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 34444444444444 33344444444455555555544433 3444445555555555555444444444455555555
Q ss_pred cCCCccccC-CcccccccccccccccccccCCCCCC---CcccCCccccccccc
Q 043053 464 VSDNRFSGQ-IPASLGRLVSLNKIILSKNLFSGPIP---SSLGLCSSLQLLDLS 513 (1058)
Q Consensus 464 L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~l~ 513 (1058)
+++|++++. .+..+..+++|+.|++++|++++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 555555432 12444555555555555555554333 345555555555554
No 390
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.56 E-value=5.9e-15 Score=148.61 Aligned_cols=129 Identities=23% Similarity=0.297 Sum_probs=67.2
Q ss_pred cccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCc
Q 043053 340 QALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSN 419 (1058)
Q Consensus 340 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 419 (1058)
+.+++++|+++. +|..+. ++|++|++++|++++..+..|..+++|++|++++|+|+++.+..|..+++|++|+|++|
T Consensus 10 ~~l~~~~~~l~~-~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSS-CCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCcc-CCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 445555555552 333222 34555555555555444444555555555555555555554445555555555555555
Q ss_pred cCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCcccc
Q 043053 420 RLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSG 471 (1058)
Q Consensus 420 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 471 (1058)
+|++..+..|..+++|+.|++++|+|+++.+..|..+++|++|+|++|++.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 5554444445555555555555555554444444555555555555555543
No 391
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.56 E-value=1.7e-15 Score=147.76 Aligned_cols=127 Identities=21% Similarity=0.260 Sum_probs=81.5
Q ss_pred ccchhhhccccCCC-CCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhh
Q 043053 361 QNLTKLLLISNDIS-GSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMID 439 (1058)
Q Consensus 361 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 439 (1058)
++|++|++++|.++ +.+|..+..+++|+.|++++|.+++. ..|..+++|++|+|++|++++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 44555555555555 44555566666666666666666655 5566666677777777776655666666666777777
Q ss_pred ccCCccCCC-CccccccCCCCCeeecCCCccccCCc---ccccccccccccccc
Q 043053 440 LSHNTLQGS-LPNSLSSLSGLQVLDVSDNRFSGQIP---ASLGRLVSLNKIILS 489 (1058)
Q Consensus 440 l~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls 489 (1058)
+++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 777777653 23567777777777777777765444 356667777777765
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.51 E-value=7.8e-15 Score=147.52 Aligned_cols=132 Identities=17% Similarity=0.203 Sum_probs=86.6
Q ss_pred ccCCCCCcEEEccCccccCCccccccCcc-ccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCC
Q 043053 381 IGNCSSLVRLRVGNNRIAGLIPREIGGLK-TLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGL 459 (1058)
Q Consensus 381 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 459 (1058)
+.++.+|+.|++++|+++.+ +. +..+. +|++|+|++|.|++. ..|..+++|+.|++++|+|++..+..|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 45556666666666666644 33 33333 677777777776654 456667777777777777776544555777777
Q ss_pred CeeecCCCccccCCcc--cccccccccccccccccCCCCCCC----cccCCcccccccccCCccc
Q 043053 460 QVLDVSDNRFSGQIPA--SLGRLVSLNKIILSKNLFSGPIPS----SLGLCSSLQLLDLSSNQLT 518 (1058)
Q Consensus 460 ~~L~L~~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~----~~~~l~~L~~L~l~~N~l~ 518 (1058)
++|++++|+|+ .+|. .+..+++|+.|+|++|++.. +|. .+..+++|+.||+++|.+.
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 77777777775 4444 56677777777777777763 444 3777788888888888765
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.48 E-value=2e-14 Score=144.55 Aligned_cols=132 Identities=18% Similarity=0.148 Sum_probs=80.3
Q ss_pred ccccccchhhhccccCCCCCCCCCccCCC-CCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCccc
Q 043053 357 LFQLQNLTKLLLISNDISGSIPPEIGNCS-SLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTEL 435 (1058)
Q Consensus 357 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 435 (1058)
+..+.+|++|++++|+++.. +. +..+. +|+.|+|++|.|+++ ..|..+++|++|+|++|+|++..+..|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 34445555555555555532 32 33333 666666666666654 456666666666666666665544445666677
Q ss_pred chhhccCCccCCCCcc--ccccCCCCCeeecCCCccccCCccc----ccccccccccccccccCC
Q 043053 436 QMIDLSHNTLQGSLPN--SLSSLSGLQVLDVSDNRFSGQIPAS----LGRLVSLNKIILSKNLFS 494 (1058)
Q Consensus 436 ~~L~l~~N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~----~~~l~~L~~L~Ls~N~l~ 494 (1058)
+.|++++|+|+. +|. .+..+++|+.|++++|.++ .+|.. +..+++|+.|++++|.+.
T Consensus 91 ~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 777777776653 443 5666777777777777776 34443 666777777777777654
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.47 E-value=7.4e-16 Score=158.33 Aligned_cols=137 Identities=22% Similarity=0.263 Sum_probs=77.7
Q ss_pred hhccCcccccccccccccccCcc------cccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCcccccc
Q 043053 333 LASCSNLQALDLSHNSLTASVPA------GLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIG 406 (1058)
Q Consensus 333 ~~~l~~L~~L~Ls~N~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 406 (1058)
+.....++.++++.+.+.+..|. .+..+++|++|++++|.+++ +| .+..+++|+.|++++|+|+. .|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~-l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKK-IENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECS-CSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCccc-ccchhh
Confidence 44556677777777777765554 55555556666666665554 33 55555666666666666653 244455
Q ss_pred CccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCc-cccccCCCCCeeecCCCccccCCc
Q 043053 407 GLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLP-NSLSSLSGLQVLDVSDNRFSGQIP 474 (1058)
Q Consensus 407 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~ 474 (1058)
.+++|++|+|++|++++ +| .+..+++|+.|++++|++++..+ ..+..+++|++|++++|.+++..|
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 55566666666666654 22 35555566666666666554222 345555666666666666554433
No 395
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.45 E-value=4.4e-16 Score=160.01 Aligned_cols=156 Identities=19% Similarity=0.290 Sum_probs=134.5
Q ss_pred ccccccchhhhccccCCCCCCCC------CccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCccc
Q 043053 357 LFQLQNLTKLLLISNDISGSIPP------EIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIG 430 (1058)
Q Consensus 357 ~~~l~~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 430 (1058)
+.....++.++++.+.+.+..|. .|..+++|++|+|++|+|+++ | .+..+++|++|++++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l-~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKI-S-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCC-C-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCccc-c-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45567889999999999988887 899999999999999999985 5 8999999999999999998 6777888
Q ss_pred CCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCc-ccccccccccccccccccCCCCCCCc---------
Q 043053 431 DCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIP-ASLGRLVSLNKIILSKNLFSGPIPSS--------- 500 (1058)
Q Consensus 431 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~--------- 500 (1058)
.+++|+.|++++|++++ +| .+..+++|++|++++|++++..+ ..+..+++|+.|++++|++.+..|..
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 168 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIE 168 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHH
Confidence 88999999999999997 45 68999999999999999985333 47889999999999999998766553
Q ss_pred -ccCCcccccccccCCcccC
Q 043053 501 -LGLCSSLQLLDLSSNQLTG 519 (1058)
Q Consensus 501 -~~~l~~L~~L~l~~N~l~~ 519 (1058)
+..+++|+.|| +|+++.
T Consensus 169 ~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 169 VVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HHHHCSSCSEEC--CGGGTT
T ss_pred HHHhCCCcEEEC--CcccCH
Confidence 78889999887 788863
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.39 E-value=5.7e-13 Score=132.79 Aligned_cols=108 Identities=22% Similarity=0.263 Sum_probs=75.4
Q ss_pred cceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCccccccccccccccccc
Q 043053 411 LNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSK 490 (1058)
Q Consensus 411 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 490 (1058)
.+.|++++|.++. +|..+. ++|+.|+|++|+|+++.|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4566666666663 444332 5667777777777766666777777777777777777766666667777777777777
Q ss_pred ccCCCCCCCcccCCcccccccccCCcccCCC
Q 043053 491 NLFSGPIPSSLGLCSSLQLLDLSSNQLTGSV 521 (1058)
Q Consensus 491 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 521 (1058)
|+|++..+..|..+++|+.|+|++|+++...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 7777666667788888888888888887543
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.38 E-value=1.2e-12 Score=130.87 Aligned_cols=105 Identities=23% Similarity=0.279 Sum_probs=68.0
Q ss_pred ceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccc
Q 043053 412 NFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKN 491 (1058)
Q Consensus 412 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 491 (1058)
+.+++++|+++ .+|..+. ++|+.|+|++|+|+++.|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45555555554 3344332 55666666666666655666666666666666666666554455666677777777777
Q ss_pred cCCCCCCCcccCCcccccccccCCcccC
Q 043053 492 LFSGPIPSSLGLCSSLQLLDLSSNQLTG 519 (1058)
Q Consensus 492 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 519 (1058)
+|++..+..|..+++|+.|+|++|++..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 7776555567777888888888888873
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.38 E-value=7.6e-13 Score=131.86 Aligned_cols=86 Identities=23% Similarity=0.294 Sum_probs=43.5
Q ss_pred CCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeec
Q 043053 385 SSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDV 464 (1058)
Q Consensus 385 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 464 (1058)
++|+.|+|++|+|+++.|..|.++++|++|+|++|+|+++.+..|..+++|+.|+|++|+|+++.+..|..+++|++|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 44455555555555554555555555555555555555444444445555555555555555444444555555555555
Q ss_pred CCCccc
Q 043053 465 SDNRFS 470 (1058)
Q Consensus 465 ~~N~l~ 470 (1058)
++|.++
T Consensus 110 ~~N~~~ 115 (170)
T 3g39_A 110 LNNPWD 115 (170)
T ss_dssp CSSCBC
T ss_pred CCCCCC
Confidence 555444
No 399
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.37 E-value=2.9e-12 Score=146.77 Aligned_cols=134 Identities=14% Similarity=0.244 Sum_probs=66.3
Q ss_pred CCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccC
Q 043053 377 IPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSL 456 (1058)
Q Consensus 377 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 456 (1058)
...+|.++.+|+.+.+.++.. .+...+|.++.+|+.+.+. +.++.+...+|.++.+|+.++|..+ ++.+...+|.++
T Consensus 257 ~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C 333 (394)
T 4gt6_A 257 ETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGC 333 (394)
T ss_dssp CTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTC
T ss_pred ccceeeecccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCC
Confidence 344555556666665554432 2444555556666666654 3344345555666666666666543 444445556666
Q ss_pred CCCCeeecCCCccccCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCcc
Q 043053 457 SGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQL 517 (1058)
Q Consensus 457 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l 517 (1058)
.+|+.+.+..+ ++.....+|.++.+|+.+++.+|.... ..+..+.+|+.+.+..|.+
T Consensus 334 ~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 334 EQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred CCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 66666666433 443444556666666666666554321 3445556666666665544
No 400
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.36 E-value=8.1e-13 Score=132.12 Aligned_cols=86 Identities=26% Similarity=0.348 Sum_probs=45.3
Q ss_pred CCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeec
Q 043053 385 SSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDV 464 (1058)
Q Consensus 385 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 464 (1058)
++|++|+|++|+|+++.|..|.++++|++|+|++|+|+++.+..|..+++|+.|+|++|+|+++.+..|..+++|++|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 44555555555555555555555555555555555555444444455555555555555555444444555555555555
Q ss_pred CCCccc
Q 043053 465 SDNRFS 470 (1058)
Q Consensus 465 ~~N~l~ 470 (1058)
++|.+.
T Consensus 113 ~~N~~~ 118 (174)
T 2r9u_A 113 YNNPWD 118 (174)
T ss_dssp CSSCBC
T ss_pred CCCCcc
Confidence 555554
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.36 E-value=2.4e-12 Score=147.48 Aligned_cols=135 Identities=15% Similarity=0.226 Sum_probs=86.7
Q ss_pred cCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccC
Q 043053 352 SVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGD 431 (1058)
Q Consensus 352 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 431 (1058)
+...+|..+.+|+.+.+..+... +...+|.++++|+.+.+. +.++.+...+|.++.+|+.++|..+ ++.+...+|.+
T Consensus 256 i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~ 332 (394)
T 4gt6_A 256 IETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAG 332 (394)
T ss_dssp ECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred cccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhC
Confidence 44455666666776666554433 556677777888888775 4566666777888888888888754 55566677888
Q ss_pred CcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccccC
Q 043053 432 CTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKNLF 493 (1058)
Q Consensus 432 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 493 (1058)
+.+|+.+.+..+ ++.+...+|.++.+|+.+++.+|.... ..+....+|+.+.+..|.+
T Consensus 333 C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 333 CEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp CTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred CCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 888888888654 665667788888888888888776541 3455666777777766654
No 402
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.19 E-value=4.1e-11 Score=128.94 Aligned_cols=146 Identities=12% Similarity=0.013 Sum_probs=114.0
Q ss_pred HHHHhhccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC-CCcccceee
Q 043053 700 EQVLKCLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR-HKNIVRFLG 778 (1058)
Q Consensus 700 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~ 778 (1058)
...+..|......|.|+.+.||++... ++.+++|+..... ......+.+|+++++.+. +..+.++++
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~-----------~~~~~~~~~E~~~l~~l~~~~~vP~v~~ 77 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRY-----------KGTTYDVEREKDMMLWLEGKLPVPKVLH 77 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGG-----------TTSTTCHHHHHHHHHHHTTTSCCCCEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCccc-----------CCCHHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 456678888889999999999999765 6889999875321 011345889999999885 677889999
Q ss_pred EEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhccccc--------------------------
Q 043053 779 CCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHD-------------------------- 832 (1058)
Q Consensus 779 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-------------------------- 832 (1058)
++...+..|+||||++|.+|.+.+.. ......++.+++++++.||+.
T Consensus 78 ~~~~~~~~~lv~e~i~G~~l~~~~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (263)
T 3tm0_A 78 FERHDGWSNLLMSEADGVLCSEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDL 150 (263)
T ss_dssp EEEETTEEEEEEECCSSEEHHHHCCT-------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTC
T ss_pred EEecCCceEEEEEecCCeehhhccCC-------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccc
Confidence 99888888999999999999876421 112346888999999999981
Q ss_pred ------------------------------CCCCeEeCCCCCCcEEEcCCCCeeeeccccce
Q 043053 833 ------------------------------CVPPIVHRDIKANNILIGLEFEPYIADFGLAK 864 (1058)
Q Consensus 833 ------------------------------~~~~ivHrDikp~Nill~~~~~~kl~DfGl~~ 864 (1058)
..+.++|||++|.||+++.+..+.|+||+.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 151 ADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01368999999999999876566799998764
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.19 E-value=9.9e-14 Score=156.57 Aligned_cols=89 Identities=19% Similarity=0.132 Sum_probs=37.4
Q ss_pred cCCcccchhhccCCccCCC----CccccccCCCCCeeecCCCccccCC----cccccccccccccccccccCCCCCCCcc
Q 043053 430 GDCTELQMIDLSHNTLQGS----LPNSLSSLSGLQVLDVSDNRFSGQI----PASLGRLVSLNKIILSKNLFSGPIPSSL 501 (1058)
Q Consensus 430 ~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 501 (1058)
..+++|++|+|++|.|++. ++..+...++|+.|+|++|.|+... ...+...++|++|+|++|+|+......+
T Consensus 180 ~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 180 AGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp HTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred hcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 3344455555555544321 1334444455555555555554321 1222334555555555555543322222
Q ss_pred cCC---c--cccccc--ccCCccc
Q 043053 502 GLC---S--SLQLLD--LSSNQLT 518 (1058)
Q Consensus 502 ~~l---~--~L~~L~--l~~N~l~ 518 (1058)
..+ . .|+.+. +.+|.+.
T Consensus 260 ~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 260 RDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp HHCC------CEEECCCC----CH
T ss_pred HHHhcCCCccchhhHhhhcCCccC
Confidence 221 1 155555 5555554
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.18 E-value=1.7e-13 Score=154.64 Aligned_cols=139 Identities=18% Similarity=0.218 Sum_probs=69.0
Q ss_pred cccceeeccCccCCCCCCCcc-cCCcccchhhccCCccCCCCcccc-----ccCCCCCeeecCCCccccC----Cccccc
Q 043053 409 KTLNFLDLSSNRLSGSVPDEI-GDCTELQMIDLSHNTLQGSLPNSL-----SSLSGLQVLDVSDNRFSGQ----IPASLG 478 (1058)
Q Consensus 409 ~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~l~~N~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~----~~~~~~ 478 (1058)
++|++|+|++|.|+......+ ..+++|+.|+|++|.|+......+ ...++|+.|+|++|.|+.. ++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 345555555555432211111 123445555555555543222222 2345566666666665431 222234
Q ss_pred ccccccccccccccCCCC----CCCcccCCcccccccccCCcccCCCChhhhhhHHHHHHHhhccCCCCCCCCccccccc
Q 043053 479 RLVSLNKIILSKNLFSGP----IPSSLGLCSSLQLLDLSSNQLTGSVPMELGQIEALEIALNLSCNGLTGPIPAQISALN 554 (1058)
Q Consensus 479 ~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~l~ls~N~l~~~~~~~~~~l~ 554 (1058)
..++|++|+|++|.|... ++..+..+++|+.|+|++|.|++.....+ ...+...+
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l---------------------~~~L~~~~ 239 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL---------------------ARAAREHP 239 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH---------------------HHHHHHCS
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH---------------------HHHHHhCC
Confidence 455555566666655432 13344556677777777777763211111 12234456
Q ss_pred cccEEecCCCcccC
Q 043053 555 KLSILDLSHNKLEG 568 (1058)
Q Consensus 555 ~L~~L~L~~N~l~~ 568 (1058)
+|+.|||++|.|+.
T Consensus 240 ~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 240 SLELLHLYFNELSS 253 (372)
T ss_dssp SCCEEECTTSSCCH
T ss_pred CCCEEeccCCCCCH
Confidence 77788888887764
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.17 E-value=2.5e-11 Score=136.54 Aligned_cols=103 Identities=24% Similarity=0.300 Sum_probs=79.9
Q ss_pred hhcccc-CCCCCCCCCccCCCCCcEEEccC-ccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCC
Q 043053 366 LLLISN-DISGSIPPEIGNCSSLVRLRVGN-NRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHN 443 (1058)
Q Consensus 366 L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 443 (1058)
++++++ .+++ +|. +..+++|+.|+|++ |+|+++.+..|.++++|++|+|++|+|+++.|..|.++++|+.|+|++|
T Consensus 13 v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455665 6663 555 77778888888885 8888877778888888888888888888888888888888888888888
Q ss_pred ccCCCCccccccCCCCCeeecCCCcccc
Q 043053 444 TLQGSLPNSLSSLSGLQVLDVSDNRFSG 471 (1058)
Q Consensus 444 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 471 (1058)
+|+++++..|..++ |+.|+|++|.+..
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 88876666666665 8888888888863
No 406
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.11 E-value=6.7e-11 Score=132.94 Aligned_cols=103 Identities=21% Similarity=0.182 Sum_probs=62.6
Q ss_pred eeccCc-cCCCCCCCcccCCcccchhhccC-CccCCCCccccccCCCCCeeecCCCccccCCcccccccccccccccccc
Q 043053 414 LDLSSN-RLSGSVPDEIGDCTELQMIDLSH-NTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSLNKIILSKN 491 (1058)
Q Consensus 414 L~Ls~N-~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 491 (1058)
++++++ +|++ +|. +..+++|+.|+|++ |+|+++.+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 13 v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455554 5552 444 55555666666654 6666555556666666666666666666655566666666666666666
Q ss_pred cCCCCCCCcccCCcccccccccCCcccC
Q 043053 492 LFSGPIPSSLGLCSSLQLLDLSSNQLTG 519 (1058)
Q Consensus 492 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 519 (1058)
+|++..+..|..++ |+.|+|++|++..
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 66655555555554 7777777777764
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.11 E-value=7.1e-10 Score=126.19 Aligned_cols=313 Identities=12% Similarity=0.087 Sum_probs=150.7
Q ss_pred cCCCCCceecccCccccccCCccccCCCccceeeeeccccccccCccccCCCCccEEEccCCcCCCCCCCCcCCCCCcce
Q 043053 142 GDCSNMTALGLADTQVSGSLPASLGKLSKLQTLSIYTTMISGEIPAEIGNCSELVSLFLYENSLSGSIPPEIGKLKKLEE 221 (1058)
Q Consensus 142 ~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 221 (1058)
....+|+.+.+.. .++.....+|.++.+|+.+.+..+ ++.....+|.++ +|+.+.+..+ ++......|..+ +|+.
T Consensus 43 ~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L~~ 117 (379)
T 4h09_A 43 KDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DLDD 117 (379)
T ss_dssp GGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CCSE
T ss_pred ccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-Cccc
Confidence 3344555555543 233344455666666666666433 333344455554 4555555433 332233334433 5666
Q ss_pred eecccccccCCCCccccCcCCccEEEeecCCCcCcCCccccccCCcceeecccCccCCCccccccccccchhhhhcCCcc
Q 043053 222 LFLWQNSLVGAIPEEIGNCTSLKMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQI 301 (1058)
Q Consensus 222 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i 301 (1058)
+.+..+ +.......|.++ +|+.+.+..+ ++......|..+.+++.+.+..+.........+ .... +.
T Consensus 118 i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~-~~~~--------~~- 184 (379)
T 4h09_A 118 FEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYV-LYNK--------NK- 184 (379)
T ss_dssp EECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTE-EEET--------TS-
T ss_pred ccCCCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccce-eccc--------cc-
Confidence 666543 222223334333 4444444332 332344445555555555554433221100000 0000 00
Q ss_pred cCcCCCcccccchhhhhhccCcccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCc
Q 043053 302 SGLIPPEIGMLSKLTVFFAWQNQLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEI 381 (1058)
Q Consensus 302 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 381 (1058)
.....+.....+..+.+.. .........+..+.+|+.+.+..+ +..+...+|..+.+|+.+.+..+ ++.+...+|
T Consensus 185 --~~~~~~~~~~~~~~~~~~~-~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF 259 (379)
T 4h09_A 185 --TILESYPAAKTGTEFTIPS-TVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLL 259 (379)
T ss_dssp --SEEEECCTTCCCSEEECCT-TCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTT
T ss_pred --ceecccccccccccccccc-ceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCcccc
Confidence 0000111111111111111 111223344555556666555443 33244455556666666666554 444555566
Q ss_pred cCCCCCcEEEccCccccCCccccccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCe
Q 043053 382 GNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQV 461 (1058)
Q Consensus 382 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 461 (1058)
.++.+|+.+.+..+ ++.+...+|.++.+|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++.+...+|.++.+|+.
T Consensus 260 ~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~ 337 (379)
T 4h09_A 260 QNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALST 337 (379)
T ss_dssp TTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCC
T ss_pred ceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCE
Confidence 66667777766543 55455566677777777777666666566666777777777777544 55455566777777777
Q ss_pred eecCCCccccCCccccccc
Q 043053 462 LDVSDNRFSGQIPASLGRL 480 (1058)
Q Consensus 462 L~L~~N~l~~~~~~~~~~l 480 (1058)
+.+..+ ++.....+|.+.
T Consensus 338 i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 338 ISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp CCCCTT-CCEECTTTTTTS
T ss_pred EEECCc-cCEEchhHhhCC
Confidence 777544 443444555544
No 408
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.09 E-value=1.3e-10 Score=124.93 Aligned_cols=137 Identities=16% Similarity=0.069 Sum_probs=99.7
Q ss_pred hccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCc--ccceeeEEEc
Q 043053 705 CLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKN--IVRFLGCCWN 782 (1058)
Q Consensus 705 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~ 782 (1058)
.+....+.+.|..+.||++...+|+.+++|..... ....+.+|+.+++.+.+.+ +.+++++...
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~--------------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~ 86 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG--------------ALNELQDEAARLSWLATTGVPCAAVLDVVTE 86 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC--------------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEEC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc--------------cchhhhHHHHHHHHHHhCCCCCCeEEEeccC
Confidence 44443333466679999998777888999986321 1245788999999886544 5568888887
Q ss_pred CCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccC-----------------------------
Q 043053 783 RNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDC----------------------------- 833 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----------------------------- 833 (1058)
++..++||||++|.++. ... .+ ...++.++++.++.||+..
T Consensus 87 ~~~~~~v~e~i~G~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (264)
T 1nd4_A 87 AGRDWLLLGEVPGQDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQD 156 (264)
T ss_dssp SSCEEEEEECCSSEETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTT
T ss_pred CCCCEEEEEecCCcccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccch
Confidence 77889999999998884 211 11 2256677777888887642
Q ss_pred --------------------------CCCeEeCCCCCCcEEEcCCCCeeeecccccee
Q 043053 834 --------------------------VPPIVHRDIKANNILIGLEFEPYIADFGLAKL 865 (1058)
Q Consensus 834 --------------------------~~~ivHrDikp~Nill~~~~~~kl~DfGl~~~ 865 (1058)
.+.++|||++|.||+++.++.+.|+|||.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 157 DLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp SCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998776677999998753
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.08 E-value=9e-10 Score=125.33 Aligned_cols=316 Identities=10% Similarity=0.084 Sum_probs=177.3
Q ss_pred cccCCCccceeeeeccccccccCccccCCCCccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCCccccCcCCc
Q 043053 164 SLGKLSKLQTLSIYTTMISGEIPAEIGNCSELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSL 243 (1058)
Q Consensus 164 ~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 243 (1058)
++....+|+.+.+... ++.....+|.+|.+|+.+.|..+ ++.+....|..+ +|+.+.+..+ +.......|..+ +|
T Consensus 41 ~~~~~~~i~~v~ip~~-vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNSG-ITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DL 115 (379)
T ss_dssp TGGGGGGCSEEEECTT-EEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CC
T ss_pred ccccccCCEEEEeCCC-ccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-Cc
Confidence 3445566777777543 44455567788888888888654 554455667666 5676666543 443334445543 67
Q ss_pred cEEEeecCCCcCcCCccccccCCcceeecccCccCCCccccccccccchhhhhcCCcccCcCCCcccccchhhhhhccCc
Q 043053 244 KMIDFSLNSLSGTIPLSIGGLSELEEFMISDNNVSGSIPANLANATNLVQLQLDTNQISGLIPPEIGMLSKLTVFFAWQN 323 (1058)
Q Consensus 244 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N 323 (1058)
+.+++..+- +......|.+. +|+.+.+..+ ++.+....|..+.+++.+.+..+.........+ ..+
T Consensus 116 ~~i~lp~~~-~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~-----------~~~ 181 (379)
T 4h09_A 116 DDFEFPGAT-TEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYV-----------LYN 181 (379)
T ss_dssp SEEECCTTC-CEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTE-----------EEE
T ss_pred ccccCCCcc-ccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccce-----------ecc
Confidence 777776542 22333344433 4555544432 232334455555555555544433221110000 000
Q ss_pred ccCCCCChhhhccCcccccccccccccccCcccccccccchhhhccccCCCCCCCCCccCCCCCcEEEccCccccCCccc
Q 043053 324 QLEGSIPSTLASCSNLQALDLSHNSLTASVPAGLFQLQNLTKLLLISNDISGSIPPEIGNCSSLVRLRVGNNRIAGLIPR 403 (1058)
Q Consensus 324 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 403 (1058)
.. ......+.....+..+.+..+.-. .....+....+|+.+.+..+ +..+....|.++..|+.+.+..+ ++.+...
T Consensus 182 ~~-~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~ 257 (379)
T 4h09_A 182 KN-KTILESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSF 257 (379)
T ss_dssp TT-SSEEEECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTT
T ss_pred cc-cceeccccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCcc
Confidence 00 011223344444554444433222 34445556666766666544 33355566777777777777665 5556666
Q ss_pred cccCccccceeeccCccCCCCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCccccCCcccccccccc
Q 043053 404 EIGGLKTLNFLDLSSNRLSGSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRFSGQIPASLGRLVSL 483 (1058)
Q Consensus 404 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 483 (1058)
+|.++.+|+.+.+..+ +..+...+|.++++|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++.....+|.++.+|
T Consensus 258 aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L 335 (379)
T 4h09_A 258 LLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKAL 335 (379)
T ss_dssp TTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred ccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCC
Confidence 7777777777777554 44455666777777777777777777666677777777777777644 554445667777777
Q ss_pred cccccccccCCCCCCCcccCCc
Q 043053 484 NKIILSKNLFSGPIPSSLGLCS 505 (1058)
Q Consensus 484 ~~L~Ls~N~l~~~~~~~~~~l~ 505 (1058)
+.+.+..+ ++.+...+|.++.
T Consensus 336 ~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 336 STISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp CCCCCCTT-CCEECTTTTTTSS
T ss_pred CEEEECCc-cCEEchhHhhCCC
Confidence 77777554 4445555666553
No 410
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.98 E-value=1.6e-09 Score=122.12 Aligned_cols=142 Identities=13% Similarity=0.183 Sum_probs=106.1
Q ss_pred cceeccccceEEEEEEecCCcEEEEEecC--cccccccCCCCCcccchHHHHHHHHHHHcccC--CCcccceeeEEEcC-
Q 043053 709 ANVIGKGCSGVVYRADMDNGEVIAVKKLW--PTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR--HKNIVRFLGCCWNR- 783 (1058)
Q Consensus 709 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~- 783 (1058)
.+.++.|.++.||++... +..+++|+.. ... .......+.+|+.+++.+. +..+.++++++.+.
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~----------~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~ 111 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSK----------LLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDES 111 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC--------------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCC----------CCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC
Confidence 567899999999999776 4678888764 221 1112356788999999997 45688888888766
Q ss_pred --CCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccC----------------------------
Q 043053 784 --NNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDC---------------------------- 833 (1058)
Q Consensus 784 --~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---------------------------- 833 (1058)
+..|+||||++|..+.+... ..++...+..++.+++++|+.||+..
T Consensus 112 ~~g~~~~vme~v~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (359)
T 3dxp_A 112 VIGRAFYIMEFVSGRVLWDQSL----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYK 187 (359)
T ss_dssp TTSSCEEEEECCCCBCCCCTTC----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHH
T ss_pred ccCCeEEEEEecCCeecCCCcc----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHH
Confidence 34799999999988865221 23677888899999999999999731
Q ss_pred ---------------------------CCCeEeCCCCCCcEEEcCCCC--eeeecccccee
Q 043053 834 ---------------------------VPPIVHRDIKANNILIGLEFE--PYIADFGLAKL 865 (1058)
Q Consensus 834 ---------------------------~~~ivHrDikp~Nill~~~~~--~kl~DfGl~~~ 865 (1058)
.+.++|||++|.||+++.++. +.|+||+.+..
T Consensus 188 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 188 LSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred hcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997763 68999998864
No 411
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.88 E-value=8.7e-10 Score=121.19 Aligned_cols=183 Identities=19% Similarity=0.164 Sum_probs=120.1
Q ss_pred cceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC-CCc--ccceeeEEEcCC-
Q 043053 709 ANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR-HKN--IVRFLGCCWNRN- 784 (1058)
Q Consensus 709 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~~~~~~~~~~- 784 (1058)
.+.++.|.+..||++. +.+++|+... ......+.+|+++++.+. +.. +.+++.+.....
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~-------------~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~ 87 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKH-------------SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSET 87 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESS-------------HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSS
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCC-------------cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCC
Confidence 4568999999999873 5678887521 123578899999998884 332 344544443333
Q ss_pred --CceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhccccc------------------------------
Q 043053 785 --NRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHD------------------------------ 832 (1058)
Q Consensus 785 --~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~------------------------------ 832 (1058)
..|+|||+++|.++.+... ..++..++..++.++++.++.||+.
T Consensus 88 ~~~~~~vm~~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (304)
T 3sg8_A 88 YQMSFAGFTKIKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSR 163 (304)
T ss_dssp CSCSCEEEECCCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTT
T ss_pred CCcceEEEcccCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcc
Confidence 2489999999988875432 2356666777788888888777751
Q ss_pred -------------------------CCCCeEeCCCCCCcEEEcC--CCCeeeeccccceeccCCCcccccccccCcCCc-
Q 043053 833 -------------------------CVPPIVHRDIKANNILIGL--EFEPYIADFGLAKLVDDGDFARSSNTVAGSYGY- 884 (1058)
Q Consensus 833 -------------------------~~~~ivHrDikp~Nill~~--~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y- 884 (1058)
..+.++|+|++|.||+++. +..+.|+||+.+..-.... . ......+
T Consensus 164 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~--D----l~~~~~~~ 237 (304)
T 3sg8_A 164 ELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDN--D----FISLMEDD 237 (304)
T ss_dssp TSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTH--H----HHTTCCTT
T ss_pred cCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHH--H----HHHHHhhc
Confidence 1146899999999999998 4567899999987543211 0 0000111
Q ss_pred --cCccccc------cC--------CCCcccchhhHHHHHHHHHhCCCCC
Q 043053 885 --IAPEYGY------MM--------KITEKSDVYSYGVVVLEVLTGKQPI 918 (1058)
Q Consensus 885 --~aPE~~~------~~--------~~~~~~DvwSlGvvl~elltg~~P~ 918 (1058)
..|+... +. ......+.|++|.++|.+.+|..+|
T Consensus 238 ~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 238 EEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp TSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cccCHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 2232110 00 0112368999999999999998776
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.82 E-value=1.4e-10 Score=129.50 Aligned_cols=205 Identities=16% Similarity=0.165 Sum_probs=114.9
Q ss_pred CCcEEEccCCcCCC-C-------CCCCCCCCCcccEEecCCCCCC---------CCCChhhcCcccCCEEeccccCCCCc
Q 043053 25 HLQTLVISDANLTG-S-------IPFDIGDCVGLIVLDFSSNNLV---------GTLPSSLGKLHNLEELILNSNQLTGK 87 (1058)
Q Consensus 25 ~L~~L~l~~~~~~~-~-------~p~~l~~l~~L~~L~l~~~~i~---------~~lp~~l~~l~~L~~L~L~~n~~~~~ 87 (1058)
.++.|.+......+ . ++.++..+++|+.|.+.+.... +.+...+..+++|+.|+|++|.-. .
T Consensus 108 ~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~ 186 (362)
T 2ra8_A 108 SLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-S 186 (362)
T ss_dssp GCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-B
T ss_pred hcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-e
Confidence 45666666544331 1 2334555677777777554221 134455667788888888877312 2
Q ss_pred cccccccchhhhHHhhhhccccCCChhhhc--ccccchhhhcCCCccccCCCCccccCCCCCceecccCccccccCCccc
Q 043053 88 IPVELSNCKSLRKLLLFDNALAGNIPAELG--RLSNLEEMRAGGNKDIVGKIPAELGDCSNMTALGLADTQVSGSLPASL 165 (1058)
Q Consensus 88 ~p~~l~~l~~L~~L~L~~n~~~~~~p~~l~--~l~~L~~L~l~~~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~~~~~~l 165 (1058)
++. + .+++|++|+|..|.+.......++ .+++|++|+++.+.+.... +..+. .+...+
T Consensus 187 l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~-----------------~~~~~-~l~~~l 246 (362)
T 2ra8_A 187 IGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGF-----------------DGDMN-VFRPLF 246 (362)
T ss_dssp CCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTC-----------------CSCGG-GTGGGS
T ss_pred ecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEecccccccc-----------------chhHH-HHHHHH
Confidence 333 3 367777777777766533333333 4566666655322100000 00000 000111
Q ss_pred --cCCCccceeeeeccccccccCccc---cCCCCccEEEccCCcCCCC----CCCCcCCCCCcceeecccccccCCCCcc
Q 043053 166 --GKLSKLQTLSIYTTMISGEIPAEI---GNCSELVSLFLYENSLSGS----IPPEIGKLKKLEELFLWQNSLVGAIPEE 236 (1058)
Q Consensus 166 --~~l~~L~~L~l~~n~i~~~~~~~l---~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 236 (1058)
..+++|+.|++.+|.+.+..+..+ ..+++|++|+|+.|.+.+. ++..+..+++|+.|+|++|.+++.....
T Consensus 247 ~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~ 326 (362)
T 2ra8_A 247 SKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKE 326 (362)
T ss_dssp CTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHH
T ss_pred hcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHH
Confidence 246778888887777765433333 2577888888888888753 2344456788899999888877544444
Q ss_pred ccC-cCCccEEEeecCC
Q 043053 237 IGN-CTSLKMIDFSLNS 252 (1058)
Q Consensus 237 l~~-l~~L~~L~L~~n~ 252 (1058)
|.. + ...++++.++
T Consensus 327 l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 327 LQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHC--CSEEECCSBC
T ss_pred HHHHc--CCEEEecCCc
Confidence 433 2 3668888776
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.77 E-value=7.5e-10 Score=123.60 Aligned_cols=137 Identities=12% Similarity=0.075 Sum_probs=67.4
Q ss_pred cccCCCccceeeeeccccc---------cccCccccCCCCccEEEccCCcCCCCCCCCcCCCCCcceeecccccccCCCC
Q 043053 164 SLGKLSKLQTLSIYTTMIS---------GEIPAEIGNCSELVSLFLYENSLSGSIPPEIGKLKKLEELFLWQNSLVGAIP 234 (1058)
Q Consensus 164 ~l~~l~~L~~L~l~~n~i~---------~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 234 (1058)
++.++++|+.|.+...... +.+...+..+++|+.|+|++|.-. .++. + .+++|+.|+|..|.+.....
T Consensus 134 s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l 210 (362)
T 2ra8_A 134 NKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVV 210 (362)
T ss_dssp THHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHH
T ss_pred hhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHH
Confidence 3445566666666443211 122233456677777777766311 2232 3 26677777777666653333
Q ss_pred cccc--CcCCccEEEeecC--CCcCcC-----Cccc--cccCCcceeecccCccCCCcccccc---ccccchhhhhcCCc
Q 043053 235 EEIG--NCTSLKMIDFSLN--SLSGTI-----PLSI--GGLSELEEFMISDNNVSGSIPANLA---NATNLVQLQLDTNQ 300 (1058)
Q Consensus 235 ~~l~--~l~~L~~L~L~~n--~l~~~~-----~~~~--~~l~~L~~L~l~~n~l~~~~~~~~~---~l~~L~~L~L~~N~ 300 (1058)
..+. .+++|++|+|+.+ ...+.. ...+ ..+++|+.|++.+|.+.+..+..+. .+++|++|+|+.|.
T Consensus 211 ~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~ 290 (362)
T 2ra8_A 211 EDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGV 290 (362)
T ss_dssp HHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSC
T ss_pred HHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCC
Confidence 3333 5677777777531 111110 0111 2356666666666665532222222 34555555555555
Q ss_pred ccC
Q 043053 301 ISG 303 (1058)
Q Consensus 301 i~~ 303 (1058)
|.+
T Consensus 291 L~d 293 (362)
T 2ra8_A 291 LTD 293 (362)
T ss_dssp CBH
T ss_pred CCh
Confidence 543
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.60 E-value=2e-07 Score=102.94 Aligned_cols=137 Identities=19% Similarity=0.161 Sum_probs=98.5
Q ss_pred hccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCC----CcccceeeEE
Q 043053 705 CLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRH----KNIVRFLGCC 780 (1058)
Q Consensus 705 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~ 780 (1058)
.+...+.++.|..+.||++ |+.+++|+.... .....+.+|+++++.+.+ ..+.+++++
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~-------------~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~- 99 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD-------------SVRISQKRELELYRFLENCKLSYQIPAVVYQ- 99 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH-------------HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE-
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH-------------HHHHHHHHHHHHHHHHHhcCCCCCcceEEec-
Confidence 3445678999999999998 667888875321 224568999999888875 234455554
Q ss_pred EcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCC--------------------------
Q 043053 781 WNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCV-------------------------- 834 (1058)
Q Consensus 781 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-------------------------- 834 (1058)
+..|+||||++|.++.+... ..++...+..++.++++.++.||+...
T Consensus 100 ---~~~~lvme~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (320)
T 3r70_A 100 ---SDRFNIMKYIKGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLI 172 (320)
T ss_dssp ---CSSCEEEECCCCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHH
T ss_pred ---CCcEEEEeecCCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHH
Confidence 56799999999998874332 224555566667777777776664321
Q ss_pred ----------------------------------CCeEeCCCCCCcEEEcCCCCeeeeccccceec
Q 043053 835 ----------------------------------PPIVHRDIKANNILIGLEFEPYIADFGLAKLV 866 (1058)
Q Consensus 835 ----------------------------------~~ivHrDikp~Nill~~~~~~kl~DfGl~~~~ 866 (1058)
+.++|+|++|.||+++.+..+.|+||+.+..-
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 173 SILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 34699999999999998666799999998653
No 415
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.47 E-value=8.4e-07 Score=95.84 Aligned_cols=78 Identities=18% Similarity=0.239 Sum_probs=61.2
Q ss_pred cccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCC---cccceeeEEEcC
Q 043053 707 VDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHK---NIVRFLGCCWNR 783 (1058)
Q Consensus 707 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~ 783 (1058)
...+.||.|.++.||++...+|+.++||+.... .......|.+|++.++.+++. .+.+++++.
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~-----------~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~--- 83 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDD-----------APALDGLFRAEALGLDWLGRSFGSPVPQVAGWD--- 83 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTT-----------CCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCC-----------CcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec---
Confidence 346789999999999998888999999986321 112346789999999999865 577777763
Q ss_pred CCceEEEEecCCCChh
Q 043053 784 NNRLLMYDYMPNGSLG 799 (1058)
Q Consensus 784 ~~~~lv~e~~~~gsL~ 799 (1058)
..++||||++|+++.
T Consensus 84 -~~~lvme~l~g~~~~ 98 (288)
T 3d1u_A 84 -DRTLAMEWVDERPPT 98 (288)
T ss_dssp -TTEEEEECCCCCCCC
T ss_pred -CcEEEEEecccCCCC
Confidence 479999999998753
No 416
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.36 E-value=1.1e-06 Score=94.50 Aligned_cols=135 Identities=18% Similarity=0.117 Sum_probs=93.9
Q ss_pred eeccccce-EEEEEEec-CCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC-CCcccceeeEEEcCCCce
Q 043053 711 VIGKGCSG-VVYRADMD-NGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR-HKNIVRFLGCCWNRNNRL 787 (1058)
Q Consensus 711 ~lG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 787 (1058)
.+..|..| .||+.... .+..+++|+-.. .....+.+|+..++.+. +--+.++++++.+++..|
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~--------------~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~ 96 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG--------------SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAW 96 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET--------------HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC--------------CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEE
Confidence 45556655 69998554 456788887521 23467889999998885 334678888888888899
Q ss_pred EEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhccccc-----------------------------------
Q 043053 788 LMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHD----------------------------------- 832 (1058)
Q Consensus 788 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~----------------------------------- 832 (1058)
+|||+++|.++.+..... ......++.++++.++.||..
T Consensus 97 lvme~l~G~~~~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (272)
T 4gkh_A 97 LLTTAIPGKTAFQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDE 170 (272)
T ss_dssp EEEECCCSEEHHHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGG
T ss_pred EEEEeeCCccccccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcccc
Confidence 999999998877654321 111233455555555555531
Q ss_pred --------------------CCCCeEeCCCCCCcEEEcCCCCeeeecccccee
Q 043053 833 --------------------CVPPIVHRDIKANNILIGLEFEPYIADFGLAKL 865 (1058)
Q Consensus 833 --------------------~~~~ivHrDikp~Nill~~~~~~kl~DfGl~~~ 865 (1058)
..+.++|+|+.+.|||++.++.+-|+||+.+..
T Consensus 171 ~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 171 RNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp GTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 112479999999999999877778999998753
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.33 E-value=9.6e-08 Score=100.81 Aligned_cols=92 Identities=22% Similarity=0.244 Sum_probs=53.8
Q ss_pred ccCCcccch--hhccCCccC---CCCccccccCCCCCeeecCCCcccc--CCcccccccccccccccccccCCCCCCCcc
Q 043053 429 IGDCTELQM--IDLSHNTLQ---GSLPNSLSSLSGLQVLDVSDNRFSG--QIPASLGRLVSLNKIILSKNLFSGPIPSSL 501 (1058)
Q Consensus 429 ~~~l~~L~~--L~l~~N~l~---~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 501 (1058)
|...+.|.. ++++.|+.. ..++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 344444544 555555332 1112222456667777777777765 2345555667777777777777653 233
Q ss_pred cCCc--ccccccccCCcccCCCC
Q 043053 502 GLCS--SLQLLDLSSNQLTGSVP 522 (1058)
Q Consensus 502 ~~l~--~L~~L~l~~N~l~~~~p 522 (1058)
..+. +|++|+|++|++++.+|
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCS
T ss_pred hhcccCCcceEEccCCcCccccC
Confidence 3333 78888888888887666
No 418
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.31 E-value=2.2e-06 Score=93.85 Aligned_cols=136 Identities=19% Similarity=0.195 Sum_probs=92.1
Q ss_pred cceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCC---cccceeeEEE-cCC
Q 043053 709 ANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHK---NIVRFLGCCW-NRN 784 (1058)
Q Consensus 709 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~-~~~ 784 (1058)
.+.++.|....||+. |+.++||+-. .......+.+|+++++.+.+. .+.+++.+.. ..+
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~-------------~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g 86 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK-------------SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDG 86 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES-------------SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC-------------CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCC
Confidence 456889999999998 5667888742 122357889999999999742 3566777664 345
Q ss_pred CceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhccccc--------------------------------
Q 043053 785 NRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHD-------------------------------- 832 (1058)
Q Consensus 785 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-------------------------------- 832 (1058)
..++||||++|.++.+... ..++......++.++++.++.||+.
T Consensus 87 ~~~~v~e~i~G~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~ 162 (306)
T 3tdw_A 87 NPFVGYRKVQGQILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFP 162 (306)
T ss_dssp CEEEEEECCCSEECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGG
T ss_pred ceEEEEeccCCeECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhccc
Confidence 5689999999988876321 1123333344444444444444432
Q ss_pred -------------------------CCCCeEeCCCCCCcEEEcC---CCC-eeeecccccee
Q 043053 833 -------------------------CVPPIVHRDIKANNILIGL---EFE-PYIADFGLAKL 865 (1058)
Q Consensus 833 -------------------------~~~~ivHrDikp~Nill~~---~~~-~kl~DfGl~~~ 865 (1058)
..+.++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 163 ~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 163 LLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp GSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred ccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2236799999999999987 455 48999998764
No 419
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.23 E-value=8.2e-08 Score=101.34 Aligned_cols=66 Identities=24% Similarity=0.359 Sum_probs=33.7
Q ss_pred CccccceeeccCccCCCC--CCCcccCCcccchhhccCCccCCCCccccccCC--CCCeeecCCCccccCCc
Q 043053 407 GLKTLNFLDLSSNRLSGS--VPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLS--GLQVLDVSDNRFSGQIP 474 (1058)
Q Consensus 407 ~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~ 474 (1058)
.+++|+.|+|++|+|+++ +|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+..|
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 345555555555555542 234444555555555555555542 2233333 56666666666654333
No 420
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.22 E-value=3.7e-06 Score=94.17 Aligned_cols=139 Identities=16% Similarity=0.091 Sum_probs=88.9
Q ss_pred ccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCc--ccceeeEEEcC-C
Q 043053 708 DANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKN--IVRFLGCCWNR-N 784 (1058)
Q Consensus 708 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~-~ 784 (1058)
..+.++.|....||+.+. +|+.+++|..... ..+.+|+.+++.+.... +.++++++... +
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----------------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g 107 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA----------------DGFYKDRYVYRHFASAALPIPEVLDIGEFSES 107 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC----------------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSS
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch----------------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCC
Confidence 356789999999999975 4788899975211 25788999998886433 56677776654 5
Q ss_pred CceEEEEecCCCChhhh------------------hhhcCCC---C------------CCHHHH----------------
Q 043053 785 NRLLMYDYMPNGSLGSL------------------LHERTGN---A------------LEWELR---------------- 815 (1058)
Q Consensus 785 ~~~lv~e~~~~gsL~~~------------------l~~~~~~---~------------l~~~~~---------------- 815 (1058)
..|+||||++|.++.+. ++..... . -.|...
T Consensus 108 ~~~lv~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~ 187 (362)
T 3ovc_A 108 LTYCISRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVM 187 (362)
T ss_dssp CEEEEEECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHC
T ss_pred CeEEEEEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHH
Confidence 57999999998766431 1111000 0 001111
Q ss_pred --------HHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeecccccee
Q 043053 816 --------YQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKL 865 (1058)
Q Consensus 816 --------~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~~~ 865 (1058)
...+..+.+-+..+.. .+.++|+|++|.||+++.++.+.|+||+.+..
T Consensus 188 ~~~~~~~~~~~~~~l~~~l~~lp~--~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 188 DDTVSASVAQALDELMLWAEDCPE--VRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp CTTTHHHHHHHHHHHHHHGGGCCC--CCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred hhcccccchHHHHHHHHHHhhCCC--CcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 0111222222222221 15789999999999998777788999998764
No 421
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.17 E-value=1.1e-07 Score=95.65 Aligned_cols=18 Identities=17% Similarity=0.043 Sum_probs=11.6
Q ss_pred ccCCcccccccccCCccc
Q 043053 501 LGLCSSLQLLDLSSNQLT 518 (1058)
Q Consensus 501 ~~~l~~L~~L~l~~N~l~ 518 (1058)
+...+.|++|+|++|.+.
T Consensus 147 L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 147 LEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHCSSCCEEECCCSSHH
T ss_pred HHhCCCcCEEeccCCCCC
Confidence 334466777777777764
No 422
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.16 E-value=4.8e-06 Score=93.45 Aligned_cols=84 Identities=6% Similarity=-0.037 Sum_probs=56.0
Q ss_pred ccee-ccccceEEEEEEec-------CCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC-C--Cccccee
Q 043053 709 ANVI-GKGCSGVVYRADMD-------NGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR-H--KNIVRFL 777 (1058)
Q Consensus 709 ~~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~~~ 777 (1058)
.+.| +.|....+|+.... +++.+++|........ .......+.+|+.+++.+. + -.+.+++
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~--------~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~ 96 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDV--------PVFPTYRLDHQFEVIRLVGELTDVPVPRVR 96 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGC--------CSSSCCCHHHHHHHHHHHHHHCCSCCCCEE
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCcc--------ccCchhHHHHHHHHHHHHhhcCCCCCCcEE
Confidence 4567 88999999998654 2667888875322100 0001245678888888885 3 3567788
Q ss_pred eEEEcC---CCceEEEEecCCCChhh
Q 043053 778 GCCWNR---NNRLLMYDYMPNGSLGS 800 (1058)
Q Consensus 778 ~~~~~~---~~~~lv~e~~~~gsL~~ 800 (1058)
+++.+. +..|+||||++|.++.+
T Consensus 97 ~~~~~~~~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 97 WIETTGDVLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp EEECSSTTTSSCEEEEECCCCBCCCB
T ss_pred EEccCCCccCCceEEEEecCCCChhh
Confidence 877655 34689999999987764
No 423
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.08 E-value=1.8e-07 Score=94.03 Aligned_cols=16 Identities=0% Similarity=-0.062 Sum_probs=7.6
Q ss_pred CCCCccEEEccCCcCC
Q 043053 191 NCSELVSLFLYENSLS 206 (1058)
Q Consensus 191 ~l~~L~~L~L~~n~l~ 206 (1058)
..++|++|+|++|.+.
T Consensus 63 ~~~~L~~L~Ls~n~i~ 78 (185)
T 1io0_A 63 TNTYVKKFSIVGTRSN 78 (185)
T ss_dssp TCCSCCEEECTTSCCC
T ss_pred hCCCcCEEECcCCCCC
Confidence 3444455555555444
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.05 E-value=4.9e-07 Score=88.29 Aligned_cols=84 Identities=13% Similarity=0.118 Sum_probs=46.5
Q ss_pred CcccEEecCCCCCCCCCChhhcCcccCCEEeccccC-CCCccccccccc----hhhhHHhhhhcc-ccCCChhhhccccc
Q 043053 48 VGLIVLDFSSNNLVGTLPSSLGKLHNLEELILNSNQ-LTGKIPVELSNC----KSLRKLLLFDNA-LAGNIPAELGRLSN 121 (1058)
Q Consensus 48 ~~L~~L~l~~~~i~~~lp~~l~~l~~L~~L~L~~n~-~~~~~p~~l~~l----~~L~~L~L~~n~-~~~~~p~~l~~l~~ 121 (1058)
..|++||+++|.|++.--..+.+|++|++|+|++|. +++..-..++.+ ++|++|+|++|. +++..-..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 357777777777765555556677777777777773 553333333332 345555555553 44333334444555
Q ss_pred chhhhcCCCc
Q 043053 122 LEEMRAGGNK 131 (1058)
Q Consensus 122 L~~L~l~~~~ 131 (1058)
|++|++++|.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 5555555444
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.93 E-value=1.7e-06 Score=84.39 Aligned_cols=34 Identities=12% Similarity=0.034 Sum_probs=15.5
Q ss_pred ccceeeeeccccccccCccccCCCCccEEEccCC
Q 043053 170 KLQTLSIYTTMISGEIPAEIGNCSELVSLFLYEN 203 (1058)
Q Consensus 170 ~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n 203 (1058)
+|+.|++++|.|+......+..|++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 3444444444444443344444444444444444
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.92 E-value=3e-05 Score=86.37 Aligned_cols=139 Identities=15% Similarity=0.233 Sum_probs=78.4
Q ss_pred ceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC--CCcccceee------EEE
Q 043053 710 NVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR--HKNIVRFLG------CCW 781 (1058)
Q Consensus 710 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~------~~~ 781 (1058)
+.++.|..+.||++...+| .+++|+.... ...+..|+.+++.+. .-.+.+++. +..
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~---------------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~ 101 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP---------------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSK 101 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC---------------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC---------------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEE
Confidence 4566778899999977655 4889987421 133444555555543 112333332 122
Q ss_pred cCCCceEEEEecCCCChh-----h---------hhhhcCC-C-----------CCCHHHH--------------------
Q 043053 782 NRNNRLLMYDYMPNGSLG-----S---------LLHERTG-N-----------ALEWELR-------------------- 815 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL~-----~---------~l~~~~~-~-----------~l~~~~~-------------------- 815 (1058)
..+..++||||++|.++. + .+|.... . ...|...
T Consensus 102 ~~~~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 181 (346)
T 2q83_A 102 HGSFLFVVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKE 181 (346)
T ss_dssp ETTEEEEEEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred ECCEEEEEEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccC
Confidence 355678999999987653 0 1121100 0 0123211
Q ss_pred -----------HHHHHHHHHHhhcccc----------cCCCCeEeCCCCCCcEEEcCCCCeeeeccccce
Q 043053 816 -----------YQILLGAAQGLAYLHH----------DCVPPIVHRDIKANNILIGLEFEPYIADFGLAK 864 (1058)
Q Consensus 816 -----------~~i~~~i~~~l~~LH~----------~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~~ 864 (1058)
..+...+.+++++|+. ...+.++|||+++.||+++.++.+.|+||+.+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 182 DPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223345666653 123489999999999999888899999999764
No 427
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.85 E-value=5.6e-05 Score=82.18 Aligned_cols=137 Identities=16% Similarity=0.194 Sum_probs=91.7
Q ss_pred cceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC---CCcccceeeEEEcCCC
Q 043053 709 ANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR---HKNIVRFLGCCWNRNN 785 (1058)
Q Consensus 709 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~ 785 (1058)
.+.|+.|....+|+.... ++.++||+... .....+.+|+..++.+. ...+.+++++....+.
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~--------------~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~ 105 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINER--------------SYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGH 105 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEG--------------GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSE
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCc--------------ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCc
Confidence 467899999999999764 67788887531 12567899999998884 3578889998887788
Q ss_pred ceEEEEecCCCChhh-----------hhhhcCC-C-------------------CCCHHHHH---HHHHH----------
Q 043053 786 RLLMYDYMPNGSLGS-----------LLHERTG-N-------------------ALEWELRY---QILLG---------- 821 (1058)
Q Consensus 786 ~~lv~e~~~~gsL~~-----------~l~~~~~-~-------------------~l~~~~~~---~i~~~---------- 821 (1058)
.++||||++|..+.. .++.... . .-+|.... ++..+
T Consensus 106 ~~lvme~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~ 185 (312)
T 3jr1_A 106 SFLLLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLI 185 (312)
T ss_dssp EEEEEECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCC
T ss_pred eEEEEEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 899999999986532 1222111 0 12454332 11111
Q ss_pred ------HHHH-hhcccc-cCCCCeEeCCCCCCcEEEcCCCCeeeeccc
Q 043053 822 ------AAQG-LAYLHH-DCVPPIVHRDIKANNILIGLEFEPYIADFG 861 (1058)
Q Consensus 822 ------i~~~-l~~LH~-~~~~~ivHrDikp~Nill~~~~~~kl~DfG 861 (1058)
+++. ...|.. ...+.+||+|+.+.||+++.++ +.|.||+
T Consensus 186 ~~~~~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 186 FGNIDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp CSCHHHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred hHHHHHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1111 122321 2246899999999999999887 8899974
No 428
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.82 E-value=4.1e-05 Score=87.16 Aligned_cols=82 Identities=12% Similarity=0.121 Sum_probs=50.7
Q ss_pred cceeccccceEEEEEEec-CCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCC--Cc-ccceeeEEEcCC
Q 043053 709 ANVIGKGCSGVVYRADMD-NGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRH--KN-IVRFLGCCWNRN 784 (1058)
Q Consensus 709 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~n-iv~~~~~~~~~~ 784 (1058)
.+.+|.|.++.||++... +++.++||...+..... ........+++..|+++++.+.. +. +.+++.+ +.+
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~----~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~ 108 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVV----GESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTE 108 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-----------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETT
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhccc----CCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCC
Confidence 467899999999999543 46889999864321000 00111234567789998887742 43 4455543 355
Q ss_pred CceEEEEecCCC
Q 043053 785 NRLLMYDYMPNG 796 (1058)
Q Consensus 785 ~~~lv~e~~~~g 796 (1058)
..++||||+++.
T Consensus 109 ~~~lvmE~l~g~ 120 (397)
T 2olc_A 109 MAVTVMEDLSHL 120 (397)
T ss_dssp TTEEEECCCTTS
T ss_pred ccEEEEEeCCCc
Confidence 678999999874
No 429
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.66 E-value=0.00023 Score=76.92 Aligned_cols=79 Identities=18% Similarity=0.235 Sum_probs=57.1
Q ss_pred hccccceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCC---CcccceeeEEE
Q 043053 705 CLVDANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRH---KNIVRFLGCCW 781 (1058)
Q Consensus 705 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~ 781 (1058)
+...++.+|.|..+.||+.+..+|+.|+||+-... .......|.+|+..|+.+.- --+.+++++.
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~-----------~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~- 83 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDD-----------APALDGLFRAEALGLDWLGRSFGSPVPQVAGWD- 83 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTT-----------CCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE-
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCC-----------CcchhhHHHHHHHHHHHHHhhCCCCcceEEecc-
Confidence 34556789999999999999999999999975322 12224568899999988852 2345555542
Q ss_pred cCCCceEEEEecCCCCh
Q 043053 782 NRNNRLLMYDYMPNGSL 798 (1058)
Q Consensus 782 ~~~~~~lv~e~~~~gsL 798 (1058)
..++||||++++..
T Consensus 84 ---~~~lv~e~l~~~~~ 97 (288)
T 3f7w_A 84 ---DRTLAMEWVDERPP 97 (288)
T ss_dssp ---TTEEEEECCCCCCC
T ss_pred ---CceEEEEeecccCC
Confidence 35899999988754
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.51 E-value=0.00039 Score=79.61 Aligned_cols=76 Identities=11% Similarity=0.140 Sum_probs=46.5
Q ss_pred CCeEeCCCCCCcEEEcCCCCeeeeccccceeccCCCcccccccccC--cCCccCccccccC---CCCcccchhhHHHHHH
Q 043053 835 PPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDFARSSNTVAG--SYGYIAPEYGYMM---KITEKSDVYSYGVVVL 909 (1058)
Q Consensus 835 ~~ivHrDikp~Nill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~~~~~DvwSlGvvl~ 909 (1058)
+.++|||++|.|||++.++ ++++||+.+..-... + ....... ...|++|+..... ......++.+....+|
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~-~--Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG-F--DIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTW 307 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH-H--HHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH-H--HHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence 4899999999999998776 999999988753211 0 0000000 1345666544311 1112345567788888
Q ss_pred HHHhC
Q 043053 910 EVLTG 914 (1058)
Q Consensus 910 elltg 914 (1058)
+.+++
T Consensus 308 ~~y~~ 312 (420)
T 2pyw_A 308 NLFNK 312 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87764
No 431
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.29 E-value=0.00055 Score=74.41 Aligned_cols=71 Identities=11% Similarity=0.087 Sum_probs=44.5
Q ss_pred cceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcc-cceeeEEEcCCCce
Q 043053 709 ANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNI-VRFLGCCWNRNNRL 787 (1058)
Q Consensus 709 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~ 787 (1058)
.+.|+.|....+|++ +.+++|+..... .......+|+.+++.+....+ .+++++ +++.-+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~------------~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~ 83 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGT------------EEYINRANEAVAAREAAKAGVSPEVLHV--DPATGV 83 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----------------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCC
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCc------------cceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCE
Confidence 678999999999998 457788764221 001123467777777753233 355543 344568
Q ss_pred EEEEec-CCCCh
Q 043053 788 LMYDYM-PNGSL 798 (1058)
Q Consensus 788 lv~e~~-~~gsL 798 (1058)
+|+||+ +|.++
T Consensus 84 ~v~e~i~~g~~l 95 (301)
T 3dxq_A 84 MVTRYIAGAQTM 95 (301)
T ss_dssp EEEECCTTCEEC
T ss_pred EEEeecCCCccC
Confidence 999999 66554
No 432
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.25 E-value=0.00055 Score=75.65 Aligned_cols=31 Identities=42% Similarity=0.398 Sum_probs=27.1
Q ss_pred CCeEeCCCCCCcEEEcCC----CCeeeecccccee
Q 043053 835 PPIVHRDIKANNILIGLE----FEPYIADFGLAKL 865 (1058)
Q Consensus 835 ~~ivHrDikp~Nill~~~----~~~kl~DfGl~~~ 865 (1058)
+.++|||+.+.|||++.+ +.+.|+||+.+..
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 489999999999999875 6789999998764
No 433
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.19 E-value=0.0005 Score=75.54 Aligned_cols=142 Identities=12% Similarity=0.096 Sum_probs=77.3
Q ss_pred cceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCc--ccceeeE------E
Q 043053 709 ANVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKN--IVRFLGC------C 780 (1058)
Q Consensus 709 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~------~ 780 (1058)
.+.|+.|....+|+....+| .+++|..... ...+.+..|+.+++.+.... +.+++.. .
T Consensus 27 ~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-------------~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~ 92 (322)
T 2ppq_A 27 YKGIAEGVENSNFLLHTTKD-PLILTLYEKR-------------VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLG 92 (322)
T ss_dssp EEEECC---EEEEEEEESSC-CEEEEEECC----------------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCE
T ss_pred eeccCCCcccceEEEEeCCc-cEEEEEeCCC-------------CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEE
Confidence 34577888899999977656 5778877421 11245567777777664212 2333321 1
Q ss_pred EcCCCceEEEEecCCCChhhh--------------hhhcC-C--CC-------CCHHHHHHH------------HHHHHH
Q 043053 781 WNRNNRLLMYDYMPNGSLGSL--------------LHERT-G--NA-------LEWELRYQI------------LLGAAQ 824 (1058)
Q Consensus 781 ~~~~~~~lv~e~~~~gsL~~~--------------l~~~~-~--~~-------l~~~~~~~i------------~~~i~~ 824 (1058)
...+..++||+|++|..+... ++... . .+ ..|.....- ...+.+
T Consensus 93 ~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~ 172 (322)
T 2ppq_A 93 ELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRP 172 (322)
T ss_dssp EETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHH
T ss_pred EECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHH
Confidence 223456899999998754220 11110 0 00 112221100 001223
Q ss_pred Hhhcccc----cCCCCeEeCCCCCCcEEEcCCCCeeeeccccce
Q 043053 825 GLAYLHH----DCVPPIVHRDIKANNILIGLEFEPYIADFGLAK 864 (1058)
Q Consensus 825 ~l~~LH~----~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~~ 864 (1058)
.+++++. ....+++|+|+++.||+++.++.+.++||+.+.
T Consensus 173 ~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 173 EIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp HHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 3333332 123489999999999999987666899998765
No 434
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.09 E-value=0.0014 Score=74.95 Aligned_cols=73 Identities=12% Similarity=0.235 Sum_probs=49.4
Q ss_pred cceeccccceEEEEEEecC--------CcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCc-ccceeeE
Q 043053 709 ANVIGKGCSGVVYRADMDN--------GEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKN-IVRFLGC 779 (1058)
Q Consensus 709 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~ 779 (1058)
.+.|+.|....||++...+ ++.+++|+.... ...+.+.+|+.+++.+...+ ..++++.
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-------------~~~~~li~E~~~l~~L~~~g~~P~l~~~ 144 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-------------ETESHLVAESVIFTLLSERHLGPKLYGI 144 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-------------CCHHHHHHHHHHHHHHHHTTSSSCEEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-------------CcHHHHHHHHHHHHHHHhCCCCCcEEEE
Confidence 4578889999999997653 578888876211 11245567999888886333 3566665
Q ss_pred EEcCCCceEEEEecCCCCh
Q 043053 780 CWNRNNRLLMYDYMPNGSL 798 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL 798 (1058)
+.+ .+||||++|.++
T Consensus 145 ~~~----g~v~e~l~G~~l 159 (429)
T 1nw1_A 145 FSG----GRLEEYIPSRPL 159 (429)
T ss_dssp ETT----EEEECCCCEEEC
T ss_pred eCC----CEEEEEeCCccc
Confidence 532 489999987554
No 435
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.05 E-value=0.0016 Score=72.71 Aligned_cols=141 Identities=16% Similarity=0.155 Sum_probs=83.3
Q ss_pred cceeccccceEEEEEEec--------CCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC-CCcccceeeE
Q 043053 709 ANVIGKGCSGVVYRADMD--------NGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR-HKNIVRFLGC 779 (1058)
Q Consensus 709 ~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~ 779 (1058)
.+.+..|....+|++... +++.+++|+... .......+.+|.++++.+. +.-..+++++
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~------------~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~ 122 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA------------ILQGVDSLVLESVMFAILAERSLGPQLYGV 122 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---------------CCHHHHHHHHHHHHHHHHTTSSCCEEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC------------ccchHHHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 356778888999999764 247888887521 1112456679999998885 3334566665
Q ss_pred EEcCCCceEEEEecCCCChhhh-----------------hhhcC---CCCC--CHHHHHHHHHHHHHH------------
Q 043053 780 CWNRNNRLLMYDYMPNGSLGSL-----------------LHERT---GNAL--EWELRYQILLGAAQG------------ 825 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~~-----------------l~~~~---~~~l--~~~~~~~i~~~i~~~------------ 825 (1058)
+.+ .+||||++|.++..- ++... .... -|.++.++..++...
T Consensus 123 ~~~----g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~ 198 (379)
T 3feg_A 123 FPE----GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLE 198 (379)
T ss_dssp ETT----EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHH
T ss_pred cCC----ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhh
Confidence 543 399999998765421 11110 1112 245555555544321
Q ss_pred -------hhcc----cc-cCCCCeEeCCCCCCcEEEcCC----CCeeeecccccee
Q 043053 826 -------LAYL----HH-DCVPPIVHRDIKANNILIGLE----FEPYIADFGLAKL 865 (1058)
Q Consensus 826 -------l~~L----H~-~~~~~ivHrDikp~Nill~~~----~~~kl~DfGl~~~ 865 (1058)
++.| .. .....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 199 ~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 199 MYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred hHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1222 11 122378999999999999876 7899999987753
No 436
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.97 E-value=0.0031 Score=69.29 Aligned_cols=141 Identities=13% Similarity=0.125 Sum_probs=80.5
Q ss_pred ceeccccceEEEEEEecCCcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCC--cccceeeE-----EEc
Q 043053 710 NVIGKGCSGVVYRADMDNGEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHK--NIVRFLGC-----CWN 782 (1058)
Q Consensus 710 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~-----~~~ 782 (1058)
..++ |....||++...+|+.+++|...+. ....+.+..|+.+++.+... .+++++.. ...
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~------------~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~ 98 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPE------------RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNH 98 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTT------------TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCC------------CCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEE
Confidence 4566 8888999997777778899987422 11245677788888777522 24444443 112
Q ss_pred CCCceEEEEecCCCChhh-----h---------hhhc----C---CCCCCHHHH----------------------HHHH
Q 043053 783 RNNRLLMYDYMPNGSLGS-----L---------LHER----T---GNALEWELR----------------------YQIL 819 (1058)
Q Consensus 783 ~~~~~lv~e~~~~gsL~~-----~---------l~~~----~---~~~l~~~~~----------------------~~i~ 819 (1058)
.+..++||||++|.++.. + ++.. . ....++... ...+
T Consensus 99 ~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 178 (328)
T 1zyl_A 99 QGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKAT 178 (328)
T ss_dssp TTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHH
T ss_pred CCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHH
Confidence 344578999998865421 0 1110 0 011222111 0111
Q ss_pred HHHHHHhhccc-ccCCCCeEeCCCCCCcEEEcCCCCeeeecccccee
Q 043053 820 LGAAQGLAYLH-HDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKL 865 (1058)
Q Consensus 820 ~~i~~~l~~LH-~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~~~ 865 (1058)
..++..++..- ......++|||+++.||+++ + .+.++||+.+..
T Consensus 179 ~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 179 DELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11122222111 11234789999999999999 4 899999987653
No 437
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.85 E-value=0.0043 Score=71.14 Aligned_cols=74 Identities=16% Similarity=0.117 Sum_probs=47.2
Q ss_pred cceeccccceEEEEEEecC-CcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcc-cceeeEEEcCCCc
Q 043053 709 ANVIGKGCSGVVYRADMDN-GEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNI-VRFLGCCWNRNNR 786 (1058)
Q Consensus 709 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~ 786 (1058)
.+.|+.|-...+|++...+ ++.+++|+..... .. .-...+|..+++.+...++ .++++++. +
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-----------~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~-- 176 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT-----------DE-IINREREKKISCILYNKNIAKKIYVFFT--N-- 176 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C-----------CS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh-----------hh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--
Confidence 4578899999999997764 4778888763211 00 1112578888888864444 56666652 2
Q ss_pred eEEEEecCCCCh
Q 043053 787 LLMYDYMPNGSL 798 (1058)
Q Consensus 787 ~lv~e~~~~gsL 798 (1058)
.+||||++|.++
T Consensus 177 G~v~e~I~G~~l 188 (458)
T 2qg7_A 177 GRIEEFMDGYAL 188 (458)
T ss_dssp EEEEECCCSEEC
T ss_pred eEEEEeeCCccC
Confidence 469999998655
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.77 E-value=0.00012 Score=72.70 Aligned_cols=82 Identities=16% Similarity=0.217 Sum_probs=35.5
Q ss_pred CCCcEEEccCc-cccCC----ccccccCccccceeeccCccCCCCC----CCcccCCcccchhhccCCccCCC----Ccc
Q 043053 385 SSLVRLRVGNN-RIAGL----IPREIGGLKTLNFLDLSSNRLSGSV----PDEIGDCTELQMIDLSHNTLQGS----LPN 451 (1058)
Q Consensus 385 ~~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~~~----~~~ 451 (1058)
++|++|+|++| +|... +..++..-..|+.|+|++|+|.... .+.+...+.|+.|+|++|+|... +.+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 44555555553 44321 1223334455555555555554221 12222334455555555554421 222
Q ss_pred ccccCCCCCeeecCC
Q 043053 452 SLSSLSGLQVLDVSD 466 (1058)
Q Consensus 452 ~~~~l~~L~~L~L~~ 466 (1058)
++..-+.|++|+|++
T Consensus 121 aL~~N~tL~~L~L~n 135 (197)
T 1pgv_A 121 STLVTQSIVEFKADN 135 (197)
T ss_dssp HTTTTCCCSEEECCC
T ss_pred HHhhCCceeEEECCC
Confidence 333334455555543
No 439
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.76 E-value=0.0024 Score=71.58 Aligned_cols=74 Identities=8% Similarity=0.098 Sum_probs=43.9
Q ss_pred cceeccccceEEEEEEecC---------CcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCc-ccceee
Q 043053 709 ANVIGKGCSGVVYRADMDN---------GEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKN-IVRFLG 778 (1058)
Q Consensus 709 ~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~ 778 (1058)
.+.++.|....+|++...+ ++.+++|+..... ........|..+++.+...+ +.++++
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~------------~~~~~~~~E~~~l~~L~~~g~~P~~~~ 105 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV------------DELYNTISEFEVYKTMSKYKIAPQLLN 105 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG------------GGTSCHHHHHHHHHHHHHTTSSCCEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc------------cceecHHHHHHHHHHHHhcCCCCceEE
Confidence 3567888889999997653 2678888763221 11112367888888775333 446665
Q ss_pred EEEcCCCceEEEEecCCCCh
Q 043053 779 CCWNRNNRLLMYDYMPNGSL 798 (1058)
Q Consensus 779 ~~~~~~~~~lv~e~~~~gsL 798 (1058)
.. .-++||||++|.++
T Consensus 106 ~~----~~~~v~e~i~G~~l 121 (369)
T 3c5i_A 106 TF----NGGRIEEWLYGDPL 121 (369)
T ss_dssp EE----TTEEEEECCCSEEC
T ss_pred ec----CCcEEEEEecCCcC
Confidence 44 24789999998654
No 440
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.53 E-value=0.0052 Score=67.78 Aligned_cols=31 Identities=39% Similarity=0.540 Sum_probs=27.7
Q ss_pred CCeEeCCCCCCcEEEcCCCCeeeecccccee
Q 043053 835 PPIVHRDIKANNILIGLEFEPYIADFGLAKL 865 (1058)
Q Consensus 835 ~~ivHrDikp~Nill~~~~~~kl~DfGl~~~ 865 (1058)
..++|+|+.+.||+++.++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4799999999999999888999999987764
No 441
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.33 E-value=0.00027 Score=70.32 Aligned_cols=90 Identities=16% Similarity=0.045 Sum_probs=42.1
Q ss_pred ccCCCCccEEEccCCcCCCCCCCCcC----CCCCcceeecccccccCCCC----ccccCcCCccEEEeecC---CCcCc-
Q 043053 189 IGNCSELVSLFLYENSLSGSIPPEIG----KLKKLEELFLWQNSLVGAIP----EEIGNCTSLKMIDFSLN---SLSGT- 256 (1058)
Q Consensus 189 l~~l~~L~~L~L~~n~l~~~~~~~~~----~l~~L~~L~L~~n~l~~~~~----~~l~~l~~L~~L~L~~n---~l~~~- 256 (1058)
+..-+.|+.|+|++|.+.+.....|+ .-+.|+.|+|++|.|.+... +.+..-+.|++|+|++| .+...
T Consensus 66 L~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g 145 (197)
T 1pgv_A 66 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQV 145 (197)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHH
T ss_pred HhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHH
Confidence 33444555555555555433222222 23455555555555543222 22333445666666544 22211
Q ss_pred ---CCccccccCCcceeecccCccC
Q 043053 257 ---IPLSIGGLSELEEFMISDNNVS 278 (1058)
Q Consensus 257 ---~~~~~~~l~~L~~L~l~~n~l~ 278 (1058)
+...+..-+.|+.|+++.|.+.
T Consensus 146 ~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 146 EMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHHHHhCCCcCeEeccCCCcc
Confidence 1223344466777777666543
No 442
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.31 E-value=0.004 Score=57.75 Aligned_cols=55 Identities=22% Similarity=0.370 Sum_probs=28.0
Q ss_pred eeeccCccCC-CCCCCcccCCcccchhhccCCccCCCCccccccCCCCCeeecCCCcc
Q 043053 413 FLDLSSNRLS-GSVPDEIGDCTELQMIDLSHNTLQGSLPNSLSSLSGLQVLDVSDNRF 469 (1058)
Q Consensus 413 ~L~Ls~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 469 (1058)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+.+.+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4555555554 12332221 2455555555555555555555555566666665554
No 443
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.14 E-value=0.0047 Score=57.26 Aligned_cols=56 Identities=18% Similarity=0.354 Sum_probs=39.9
Q ss_pred eeecCCCccc-cCCcccccccccccccccccccCCCCCCCcccCCcccccccccCCccc
Q 043053 461 VLDVSDNRFS-GQIPASLGRLVSLNKIILSKNLFSGPIPSSLGLCSSLQLLDLSSNQLT 518 (1058)
Q Consensus 461 ~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 518 (1058)
.++.+++.++ ..+|..+. .+|+.|+|++|+|+.+.+..|..+++|+.|+|++|++.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5667777765 24554433 35777788888887777777888888888888888885
No 444
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.92 E-value=0.027 Score=56.18 Aligned_cols=102 Identities=19% Similarity=0.164 Sum_probs=67.3
Q ss_pred ChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeCCCCCCcEEEcCCCCeeeeccccceeccCCCcccccc
Q 043053 797 SLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDFARSSN 876 (1058)
Q Consensus 797 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~~~~~~~~~~~~~~ 876 (1058)
+|.++++.+ +.+++++++|.++.|.+.+|..+-... .-..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~-~~PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 34 SLEEILRLY-NQPINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred cHHHHHHHc-CCCcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc------------
Confidence 799999876 689999999999999999987762110 101333457999999999988764 1110
Q ss_pred cccCcCCccCccccccCCCCcccchhhHHHHHHHHHhCCCC
Q 043053 877 TVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQP 917 (1058)
Q Consensus 877 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvvl~elltg~~P 917 (1058)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123566888753 3456778899999999998864443
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.69 E-value=0.024 Score=63.35 Aligned_cols=152 Identities=13% Similarity=0.168 Sum_probs=82.5
Q ss_pred cceeccccceEEEEEEecC--------CcEEEEEecCcccccc-----cCCCCCcc--cchHHHHHHHHHHHcccC-CCc
Q 043053 709 ANVIGKGCSGVVYRADMDN--------GEVIAVKKLWPTTMAA-----ANGCSDEK--SGVRDSFSAEIKTLGSIR-HKN 772 (1058)
Q Consensus 709 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~-----~~~~~~~~--~~~~~~~~~E~~~l~~l~-h~n 772 (1058)
.+.|..|-...+|++...+ ++.|.+++.-..+... .....+.. -...+....|..+++.+. +.-
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 3567778889999997653 3678888753221000 00000000 001123446888888886 444
Q ss_pred ccceeeEEEcCCCceEEEEecCCCChhh--h---------------hhhcC---CCCCC--HHHHHHHHHHHHH------
Q 043053 773 IVRFLGCCWNRNNRLLMYDYMPNGSLGS--L---------------LHERT---GNALE--WELRYQILLGAAQ------ 824 (1058)
Q Consensus 773 iv~~~~~~~~~~~~~lv~e~~~~gsL~~--~---------------l~~~~---~~~l~--~~~~~~i~~~i~~------ 824 (1058)
..++++++.. .+|+||++|-+|.. + +|... ..... +....++..++..
T Consensus 137 ~Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 5666766532 39999999765522 1 01110 11122 3344444433221
Q ss_pred ----------------Hh----hccccc-CCCCeEeCCCCCCcEEEcCC------CCeeeeccccce
Q 043053 825 ----------------GL----AYLHHD-CVPPIVHRDIKANNILIGLE------FEPYIADFGLAK 864 (1058)
Q Consensus 825 ----------------~l----~~LH~~-~~~~ivHrDikp~Nill~~~------~~~kl~DfGl~~ 864 (1058)
.+ +++... ....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 11 112111 22378999999999999887 789999998765
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.56 E-value=0.047 Score=61.60 Aligned_cols=140 Identities=13% Similarity=0.138 Sum_probs=83.0
Q ss_pred cceeccccceEEEEEEecC--------CcEEEEEecCcccccccCCCCCcccchHHHHHHHHHHHcccC-CCcccceeeE
Q 043053 709 ANVIGKGCSGVVYRADMDN--------GEVIAVKKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIR-HKNIVRFLGC 779 (1058)
Q Consensus 709 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~ 779 (1058)
.+.+..|....+|+....+ ++.+++++..... .......+|..+++.+. +.-..++++.
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t------------~~~idR~~E~~~l~~L~~~gi~P~l~~~ 142 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV------------GKFYDSKVELDVFRYLSNINIAPNIIAD 142 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-------------CCCCHHHHHHHHHHHHHTTSSCCEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc------------chhcCHHHHHHHHHHHHhcCCCCCEEEE
Confidence 4567888899999997653 5778888753211 11122357888888775 3334455553
Q ss_pred EEcCCCceEEEEecCCCChhh--h------------h---hh--c---------CCCCCCHHHHHHHHHHHHH-------
Q 043053 780 CWNRNNRLLMYDYMPNGSLGS--L------------L---HE--R---------TGNALEWELRYQILLGAAQ------- 824 (1058)
Q Consensus 780 ~~~~~~~~lv~e~~~~gsL~~--~------------l---~~--~---------~~~~l~~~~~~~i~~~i~~------- 824 (1058)
+ .-+.||||++|.++.. + + |. . ...+.-|.++.++..++-.
T Consensus 143 ~----~~~~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~ 218 (424)
T 3mes_A 143 F----PEGRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNF 218 (424)
T ss_dssp E----TTEEEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC-
T ss_pred c----CCCEEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccch
Confidence 3 2388999999876421 0 0 10 0 0111124444444333211
Q ss_pred ------------Hhhccc---------------------ccCCCCeEeCCCCCCcEEEcCCCCeeeecccccee
Q 043053 825 ------------GLAYLH---------------------HDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKL 865 (1058)
Q Consensus 825 ------------~l~~LH---------------------~~~~~~ivHrDikp~Nill~~~~~~kl~DfGl~~~ 865 (1058)
.+++|. ......++|+|+.+.||+ +.++.+.++||..+..
T Consensus 219 ~~~~~~~~~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 219 QIDKELYSKILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred hhccccHHHHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 122221 111247899999999999 7788999999988764
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.05 E-value=0.72 Score=51.76 Aligned_cols=30 Identities=23% Similarity=0.386 Sum_probs=25.0
Q ss_pred CeEeCCCCCCcEEE------cCCCCeeeecccccee
Q 043053 836 PIVHRDIKANNILI------GLEFEPYIADFGLAKL 865 (1058)
Q Consensus 836 ~ivHrDikp~Nill------~~~~~~kl~DfGl~~~ 865 (1058)
.++|+|+.+.||++ +++..++++||-+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46799999999999 3456799999988764
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=88.06 E-value=1.3 Score=44.00 Aligned_cols=122 Identities=14% Similarity=0.144 Sum_probs=81.5
Q ss_pred HHHHHcccCCCcccceeeEEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhhcccccCCCCeEeC
Q 043053 761 EIKTLGSIRHKNIVRFLGCCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLAYLHHDCVPPIVHR 840 (1058)
Q Consensus 761 E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHr 840 (1058)
|+..+.. .||++++. .+-.+++.+.+.++. ..+..+|-.- ...+...+++++.+|+...++++.. +|-
T Consensus 36 el~LL~~-~~~~Fl~~-~I~e~eD~v~~~y~~--~~~~~~f~~i---k~~~~~eKlr~l~ni~~l~~~~~~r-----~tf 103 (215)
T 4ann_A 36 LMYLLEQ-HSPYFIDA-ELTELRDSFQIHYDI--NDNHTPFDNI---KSFTKNEKLRYLLNIKNLEEVNRTR-----YTF 103 (215)
T ss_dssp GGGGGGS-CCTTBCCE-EEEECSSEEEEEECC--CTTSEEGGGG---GGSCHHHHHHHHHHGGGGGGGGGSS-----EEC
T ss_pred HHHHHhc-cCCcccce-EEEEcccEEEEEEEc--CcccCCHHHH---HhcCHHHHHHHHHHHHHHHHHhcCc-----eEE
Confidence 3444433 58988876 455555544444443 3334333321 3478899999999999999888876 899
Q ss_pred CCCCCcEEEcCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccch-hhHHHHHHHHHhCCCCCC
Q 043053 841 DIKANNILIGLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDV-YSYGVVVLEVLTGKQPID 919 (1058)
Q Consensus 841 Dikp~Nill~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv-wSlGvvl~elltg~~P~~ 919 (1058)
-++|+|++++.++.+++.-.|+...+ +|.- .+ ..|. -.+=+++..+++++..|+
T Consensus 104 ~L~P~NL~f~~~~~p~i~~RGik~~l-------------------~P~~-----~~-ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 104 VLAPDELFFTRDGLPIAKTRGLQNVV-------------------DPLP-----VS-EAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp CCSGGGEEECTTSCEEESCCEETTTB-------------------SCCC-----CC-HHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEecceEEEcCCCCEEEEEccCccCC-------------------CCCC-----CC-HHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999999999877753222 2210 11 1122 347788889999998875
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=87.27 E-value=1.1 Score=31.81 Aligned_cols=29 Identities=17% Similarity=0.284 Sum_probs=13.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 043053 645 KVAIALLITLTVAMAIMGTFALIRARRAM 673 (1058)
Q Consensus 645 ~~~i~~~~~~~~~~~~~~~~~~~~~rr~~ 673 (1058)
.++.+++.++++++++++.++++.+||+.
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 35555555555544444444444444443
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=86.64 E-value=2.2 Score=42.64 Aligned_cols=114 Identities=10% Similarity=0.071 Sum_probs=78.4
Q ss_pred CCCcccceeeEEEcCCCceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHhh-cccccCCCCeEeCCCCCCcE
Q 043053 769 RHKNIVRFLGCCWNRNNRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGAAQGLA-YLHHDCVPPIVHRDIKANNI 847 (1058)
Q Consensus 769 ~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~-~LH~~~~~~ivHrDikp~Ni 847 (1058)
.||++ -..+-.+++.+.+.++.-+++.=...++ ..+...+++.+.+|+.... +++.. +|--++|+|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-----~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-----KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-----TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-----hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceE
Confidence 58888 4444456666666666554433233332 3688899999999999999 88876 8899999999
Q ss_pred EEcCCCCeeeeccccceeccCCCcccccccccCcCCccCccccccCCCCcccchh-hHHHHHHHHHhCCCCCC
Q 043053 848 LIGLEFEPYIADFGLAKLVDDGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVY-SYGVVVLEVLTGKQPID 919 (1058)
Q Consensus 848 ll~~~~~~kl~DfGl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvw-SlGvvl~elltg~~P~~ 919 (1058)
+++.++.+++.-.|+-. -++|.-.. ..|.| .+=+++..++.++..|+
T Consensus 116 ~f~~~~~p~i~hRGi~~-------------------~lpP~e~~------ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKE-------------------SLPPDEWD------DERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EECTTCCEEESCCEETT-------------------TBSSCSCC------HHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEeCCCcEEEEEcCCcc-------------------cCCCCCCC------HHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999998777532 22332111 11222 47778888998887774
No 451
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=84.14 E-value=1.8 Score=30.63 Aligned_cols=27 Identities=22% Similarity=0.283 Sum_probs=11.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043053 646 VAIALLITLTVAMAIMGTFALIRARRA 672 (1058)
Q Consensus 646 ~~i~~~~~~~~~~~~~~~~~~~~~rr~ 672 (1058)
++.+++.++++.+++++.++++++||+
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhh
Confidence 444444444444444444444444443
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=78.55 E-value=4.7 Score=28.52 Aligned_cols=26 Identities=15% Similarity=0.354 Sum_probs=10.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhc
Q 043053 647 AIALLITLTVAMAIMGTFALIRARRA 672 (1058)
Q Consensus 647 ~i~~~~~~~~~~~~~~~~~~~~~rr~ 672 (1058)
+.+.++++++++++.+.++++.+||+
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHHhheehhh
Confidence 33444443333333333333333443
No 453
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=69.85 E-value=0.61 Score=53.31 Aligned_cols=62 Identities=5% Similarity=-0.117 Sum_probs=17.4
Q ss_pred cceeccccceEEEEEEecC-CcEEEE------EecCcccccccCCCCCcccchHHHHHHHHHHHcccCCCcccceeeEEE
Q 043053 709 ANVIGKGCSGVVYRADMDN-GEVIAV------KKLWPTTMAAANGCSDEKSGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 781 (1058)
Q Consensus 709 ~~~lG~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 781 (1058)
.+.+| ||.||+|.+.. ..+||| |...... ........|.+|+.+++..+|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~---------~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDG---------VSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC--------------------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCcccccccc---------ccccccccccccccccccccccccCCCcceEE
Confidence 44566 99999996653 357888 5543211 12233467889999999999999999988765
Q ss_pred c
Q 043053 782 N 782 (1058)
Q Consensus 782 ~ 782 (1058)
.
T Consensus 215 ~ 215 (463)
T 3cxl_A 215 H 215 (463)
T ss_dssp E
T ss_pred e
Confidence 3
No 454
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=60.64 E-value=8.8 Score=26.29 Aligned_cols=24 Identities=25% Similarity=0.481 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 043053 648 IALLITLTVAMAIMGTFALIRARR 671 (1058)
Q Consensus 648 i~~~~~~~~~~~~~~~~~~~~~rr 671 (1058)
.+++++.++++++++.+.+++.||
T Consensus 14 AGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 14 VAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred eeeehHHHHHHHHHHHHHHHHeec
Confidence 344555554444444444444444
No 455
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=56.13 E-value=32 Score=36.52 Aligned_cols=77 Identities=14% Similarity=0.144 Sum_probs=42.1
Q ss_pred CceEEEEecCCCChhhhhhhcCCCCCCHHHHHHHHHHH--HHHhhcccccCC-CCeE-eCCCCCCcEEEcCCCC-eeeec
Q 043053 785 NRLLMYDYMPNGSLGSLLHERTGNALEWELRYQILLGA--AQGLAYLHHDCV-PPIV-HRDIKANNILIGLEFE-PYIAD 859 (1058)
Q Consensus 785 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i--~~~l~~LH~~~~-~~iv-HrDikp~Nill~~~~~-~kl~D 859 (1058)
..+++|||++|..|.+.-.......+.... +.++ +-+++.+..+.. .+.+ +.--.+.|||++.++. +.++|
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~~~~f~~~~----~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~ID 231 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSAPEVLTKST----MQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPID 231 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSHHHHSCHHH----HHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECS
T ss_pred cceehhhhcCCCccccchhhhhhhhcCHHH----HHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEc
Confidence 456999999987766543221011122222 2222 223444443322 1112 1235899999987654 88999
Q ss_pred ccccee
Q 043053 860 FGLAKL 865 (1058)
Q Consensus 860 fGl~~~ 865 (1058)
-+.+..
T Consensus 232 hn~af~ 237 (342)
T 1cja_A 232 SKIIPL 237 (342)
T ss_dssp CCCCCC
T ss_pred CCcccc
Confidence 888754
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=50.84 E-value=22 Score=30.52 Aligned_cols=46 Identities=20% Similarity=0.177 Sum_probs=26.4
Q ss_pred CCCCCCCCCccCCCCCcEEEccCccccCCccccccCccccceeeccC
Q 043053 372 DISGSIPPEIGNCSSLVRLRVGNNRIAGLIPREIGGLKTLNFLDLSS 418 (1058)
Q Consensus 372 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 418 (1058)
.++.+...+|.+|++|+.+.|-.+ ++.+...+|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344445556666666666666543 4445555666666666666554
No 457
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=50.09 E-value=25 Score=22.90 Aligned_cols=28 Identities=36% Similarity=0.651 Sum_probs=16.7
Q ss_pred cchhHHHHHHHHHHHHHHH-HHHHHHHHh
Q 043053 644 LKVAIALLITLTVAMAIMG-TFALIRARR 671 (1058)
Q Consensus 644 ~~~~i~~~~~~~~~~~~~~-~~~~~~~rr 671 (1058)
+..++..++++++++++++ .|.++|-||
T Consensus 6 l~malt~i~gl~vif~~lg~tflywrgrr 34 (40)
T 2l9u_A 6 LTMALTVIAGLVVIFMMLGGTFLYWRGRR 34 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCceeEEEcccc
Confidence 4455666667666666665 455555554
No 458
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=40.18 E-value=59 Score=27.72 Aligned_cols=41 Identities=12% Similarity=0.064 Sum_probs=18.8
Q ss_pred CCCCcCCCCCcceeecccccccCCCCccccCcCCccEEEeec
Q 043053 209 IPPEIGKLKKLEELFLWQNSLVGAIPEEIGNCTSLKMIDFSL 250 (1058)
Q Consensus 209 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~ 250 (1058)
....|..|.+|+.+.|-.+ ++......|.+|.+|+.+.+..
T Consensus 12 ~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 12 DKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 3344455555555555432 3323344455555555555443
No 459
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=37.13 E-value=2e+02 Score=33.42 Aligned_cols=82 Identities=12% Similarity=0.149 Sum_probs=49.7
Q ss_pred cceeeEEEcCCCceEEEEecCCCChhhhhh----------hcCCCC-----CCHHHHHHHHHHHH--HHhhcccccCCCC
Q 043053 774 VRFLGCCWNRNNRLLMYDYMPNGSLGSLLH----------ERTGNA-----LEWELRYQILLGAA--QGLAYLHHDCVPP 836 (1058)
Q Consensus 774 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~----------~~~~~~-----l~~~~~~~i~~~i~--~~l~~LH~~~~~~ 836 (1058)
++.|.+........ +.|++++.++.+.+. +..... ..+..+..++..+| ..+.|+=..
T Consensus 402 i~~Y~Vipls~~~G-lIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi---- 476 (614)
T 3ls8_A 402 LTPYKVLATSTKHG-FMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV---- 476 (614)
T ss_dssp CCCCCEEESSSSEE-EEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred eeccEEEEecCCCc-eEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec----
Confidence 44555555544433 468887655555443 221111 12455555665544 334555432
Q ss_pred eEeCCCCCCcEEEcCCCCeeeeccccc
Q 043053 837 IVHRDIKANNILIGLEFEPYIADFGLA 863 (1058)
Q Consensus 837 ivHrDikp~Nill~~~~~~kl~DfGl~ 863 (1058)
+|=+++|||++.+|++.=+|||..
T Consensus 477 ---gDRH~~NILld~tG~v~HIDFG~~ 500 (614)
T 3ls8_A 477 ---GDRHLDNLLLTKTGKLFHIDFGYI 500 (614)
T ss_dssp ---CCCCTTSEEECTTSCEEECCCSSC
T ss_pred ---cCCCCcceeEcCCCCEeeeehHHh
Confidence 577899999999999999999986
No 460
>2k21_A Potassium voltage-gated channel subfamily E member; KCNE1, membrane protein, potassium channel, MINK, auxilliary subunit, micelles, ION transport; NMR {Homo sapiens}
Probab=29.39 E-value=1.1e+02 Score=27.05 Aligned_cols=31 Identities=6% Similarity=0.155 Sum_probs=18.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 043053 645 KVAIALLITLTVAMAIMGTFALIRARRAMKD 675 (1058)
Q Consensus 645 ~~~i~~~~~~~~~~~~~~~~~~~~~rr~~~~ 675 (1058)
.+.|.+++++++.+++.+.+.++|.||+-++
T Consensus 53 ylYIL~vmgffgff~~GImLsYiRSKk~E~s 83 (138)
T 2k21_A 53 ALYVLMVLGFFGFFTLGIMLSYIRSKKLEHS 83 (138)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred eehHHHHHHHHHHHHHHHHHHHhHhhhcccc
Confidence 4455556666666666666677777766443
No 461
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=26.29 E-value=34 Score=26.51 Aligned_cols=9 Identities=22% Similarity=0.689 Sum_probs=3.5
Q ss_pred HHHHHHHHH
Q 043053 659 AIMGTFALI 667 (1058)
Q Consensus 659 ~~~~~~~~~ 667 (1058)
++++++.+.
T Consensus 30 li~gcwcyl 38 (90)
T 1zza_A 30 LILGCWCYL 38 (90)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHHHH
Confidence 333444333
Done!