BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043054
(90 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40592|RL10_TOBAC 60S ribosomal protein L10 (Fragment) OS=Nicotiana tabacum GN=RPL10
PE=2 SV=1
Length = 150
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 66/75 (88%)
Query: 15 ANPTQEALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHG 74
AN QEALRRAKFKFP RQKIIVSRKWGFTKFSR DYL++ SENRIVPDG+NAKL GCHG
Sbjct: 74 ANHAQEALRRAKFKFPRRQKIIVSRKWGFTKFSRTDYLKYKSENRIVPDGVNAKLLGCHG 133
Query: 75 PLADRQPGRAFLEAT 89
LA RQPGRAFLEA
Sbjct: 134 RLAARQPGRAFLEAV 148
>sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10 OS=Vitis riparia GN=RPL10 PE=2 SV=1
Length = 220
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 56/75 (74%), Positives = 67/75 (89%)
Query: 15 ANPTQEALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHG 74
++ QEALRRAKFKFP RQKIIVSRKWGFTKF+R DY++W S+NRI+PDG+NAKL GCHG
Sbjct: 145 SHHAQEALRRAKFKFPARQKIIVSRKWGFTKFNRTDYIKWKSQNRILPDGVNAKLLGCHG 204
Query: 75 PLADRQPGRAFLEAT 89
PLA+RQPG+AF+ A
Sbjct: 205 PLANRQPGKAFINAC 219
>sp|P93847|RL10_SOLME 60S ribosomal protein L10 OS=Solanum melongena GN=RPL10 PE=2 SV=1
Length = 219
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/75 (80%), Positives = 66/75 (88%)
Query: 15 ANPTQEALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHG 74
+N QEALRRAKFKFP RQKIIVSRKWGFTKFSR DYL++ SENRIVPDG+NAKL G HG
Sbjct: 145 SNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLKYKSENRIVPDGVNAKLLGNHG 204
Query: 75 PLADRQPGRAFLEAT 89
PLA RQPGRAFL ++
Sbjct: 205 PLAARQPGRAFLSSS 219
>sp|O22431|RL10_PINTA 60S ribosomal protein L10 OS=Pinus taeda GN=RPL10 PE=2 SV=1
Length = 228
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 53/76 (69%), Positives = 67/76 (88%)
Query: 15 ANPTQEALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHG 74
+N QEALRRAKFKFP R+KIIV+RKWGFTK++RADYL+W +ENRIVPDG+N KL GC G
Sbjct: 145 SNHAQEALRRAKFKFPGREKIIVNRKWGFTKYTRADYLKWKTENRIVPDGVNPKLLGCRG 204
Query: 75 PLADRQPGRAFLEATI 90
PL++R+PG+AFL+ +
Sbjct: 205 PLSNRKPGQAFLKPAV 220
>sp|Q9M5M7|RL10_EUPES 60S ribosomal protein L10 OS=Euphorbia esula GN=RPL10 PE=2 SV=1
Length = 220
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 56/75 (74%), Positives = 65/75 (86%)
Query: 15 ANPTQEALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHG 74
++ QEALRRAKFKFP RQKIIVSRKWGFTK +RADY R SENRI+PDG+NAKL GCHG
Sbjct: 145 SHNAQEALRRAKFKFPGRQKIIVSRKWGFTKINRADYPRLKSENRILPDGVNAKLLGCHG 204
Query: 75 PLADRQPGRAFLEAT 89
LA+R+PGRAF++A
Sbjct: 205 RLANRKPGRAFIDAV 219
>sp|Q08770|RL102_ARATH 60S ribosomal protein L10-2 OS=Arabidopsis thaliana GN=RPL10B PE=2
SV=2
Length = 221
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 60/73 (82%)
Query: 16 NPTQEALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGP 75
+ QEALRRAKFKFP RQKIIVSRKWGFTKF+RADY + E RIVPDG+NAK CHGP
Sbjct: 146 HHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRADYTKLRQEKRIVPDGVNAKFLSCHGP 205
Query: 76 LADRQPGRAFLEA 88
LA+RQPG AFL A
Sbjct: 206 LANRQPGSAFLSA 218
>sp|Q93VT9|RL101_ARATH 60S ribosomal protein L10-1 OS=Arabidopsis thaliana GN=RPL10A PE=1
SV=1
Length = 220
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 60/74 (81%)
Query: 15 ANPTQEALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHG 74
+ QEALRRAKFKFP RQKIIVSRKWGFTKF+RAD+ + E R+VPDG+NAK CHG
Sbjct: 145 GHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRADFTKLRQEKRVVPDGVNAKFLSCHG 204
Query: 75 PLADRQPGRAFLEA 88
PLA+RQPG AFL A
Sbjct: 205 PLANRQPGSAFLPA 218
>sp|P45633|RL10_MAIZE 60S ribosomal protein L10 OS=Zea mays GN=RPL10 PE=2 SV=1
Length = 220
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 59/75 (78%)
Query: 15 ANPTQEALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHG 74
A EALRRAKFKFP RQKII SRKWGFTKFSRADYL++ SE RIVPDG+NAKL HG
Sbjct: 145 AAHASEALRRAKFKFPARQKIIESRKWGFTKFSRADYLKYKSEGRIVPDGVNAKLLANHG 204
Query: 75 PLADRQPGRAFLEAT 89
L R PG+AFL+A
Sbjct: 205 RLEKRAPGKAFLDAV 219
>sp|Q0DKF0|RL102_ORYSJ 60S ribosomal protein L10-2 OS=Oryza sativa subsp. japonica GN=SG12
PE=2 SV=1
Length = 219
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 58/72 (80%)
Query: 18 TQEALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPLA 77
EALRRAKFKFP RQKII SRKWGFTKFSR +Y+R SE RI+PDG+NAKL GCHG L+
Sbjct: 148 ASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLKSEGRIMPDGVNAKLLGCHGRLS 207
Query: 78 DRQPGRAFLEAT 89
R PG+AFL A
Sbjct: 208 ARAPGKAFLSAA 219
>sp|A2Y0T4|RL102_ORYSI 60S ribosomal protein L10-2 OS=Oryza sativa subsp. indica GN=SG12
PE=2 SV=2
Length = 219
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 58/72 (80%)
Query: 18 TQEALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPLA 77
EALRRAKFKFP RQKII SRKWGFTKFSR +Y+R SE RI+PDG+NAKL GCHG L+
Sbjct: 148 ASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLKSEGRIMPDGVNAKLLGCHGRLS 207
Query: 78 DRQPGRAFLEAT 89
R PG+AFL A
Sbjct: 208 ARAPGKAFLSAA 219
>sp|Q93W22|RL103_ARATH 60S ribosomal protein L10-3 OS=Arabidopsis thaliana GN=RPL10C PE=2
SV=1
Length = 221
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 59/72 (81%)
Query: 18 TQEALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPLA 77
QEALRRAKFKFP RQKIIVSRKWGFTKF+RA+Y + + RIVPDG+NAK HGPLA
Sbjct: 148 AQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAEYTKLRAMKRIVPDGVNAKFLSNHGPLA 207
Query: 78 DRQPGRAFLEAT 89
+RQPG AF+ AT
Sbjct: 208 NRQPGSAFISAT 219
>sp|Q0ITS8|RL101_ORYSJ 60S ribosomal protein L10-1 OS=Oryza sativa subsp. japonica GN=SC34
PE=2 SV=1
Length = 224
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 59/76 (77%)
Query: 15 ANPTQEALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHG 74
A +EALRRAKFKFP RQKII SRKWGFTKF+R +Y++ +E RI+ DG+NA+L G HG
Sbjct: 145 AKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNAQLLGSHG 204
Query: 75 PLADRQPGRAFLEATI 90
LA R PG+AFL TI
Sbjct: 205 RLAKRAPGKAFLAETI 220
>sp|A2ZCQ7|RL101_ORYSI 60S ribosomal protein L10-1 OS=Oryza sativa subsp. indica GN=SC34
PE=2 SV=2
Length = 224
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 59/76 (77%)
Query: 15 ANPTQEALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHG 74
A +EALRRAKFKFP RQKII SRKWGFTKF+R +Y++ +E RI+ DG+NA+L G HG
Sbjct: 145 AKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNAQLLGSHG 204
Query: 75 PLADRQPGRAFLEATI 90
LA R PG+AFL TI
Sbjct: 205 RLAKRAPGKAFLAETI 220
>sp|O61231|RL10_DROME 60S ribosomal protein L10 OS=Drosophila melanogaster GN=RpL10 PE=2
SV=1
Length = 218
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 41/58 (70%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPLA 77
EALRRAKFKFP RQKI VS+KWGFTK+ R Y +NR+ PDG N K HGP+A
Sbjct: 150 EALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHGPIA 207
>sp|Q54J69|RL10_DICDI 60S ribosomal protein L10 OS=Dictyostelium discoideum GN=rpl10 PE=1
SV=2
Length = 217
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPLA 77
EALRR+ +KFP RQKI+VS+KWGFT ++R Y + ++ R++ DG N K+ HG LA
Sbjct: 150 EALRRSSYKFPGRQKIVVSKKWGFTAYNREAYQKLKADGRLMNDGANVKVITNHGTLA 207
>sp|Q09533|RL10_CAEEL 60S ribosomal protein L10 OS=Caenorhabditis elegans GN=rpl-10 PE=3
SV=1
Length = 214
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPLA 77
EA RRAKFKFP RQ I+ SRKWGFTK+ R DY R +E R+ DG+ +L HGPL
Sbjct: 150 EAFRRAKFKFPGRQIIVSSRKWGFTKWDREDYERMRAEGRLRSDGVGVQLQREHGPLT 207
>sp|Q235M8|RL10_TETTS 60S ribosomal protein L10 OS=Tetrahymena thermophila (strain SB210)
GN=RPL10 PE=1 SV=1
Length = 215
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 42/58 (72%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPLA 77
+AL RAK KFP RQK++ S+KWGFTK +RA Y R ++ ++V DG N K+ G GPL+
Sbjct: 150 DALTRAKAKFPGRQKVVTSQKWGFTKLTRAQYSRLRNQKKLVTDGSNVKVIGERGPLS 207
>sp|Q4R4D3|RL10L_MACFA 60S ribosomal protein L10-like OS=Macaca fascicularis GN=RPL10L
PE=2 SV=1
Length = 214
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPL 76
EALRRAKFKFP RQKI +S+KWGFTKF+ ++ ++ R++PDG K HGPL
Sbjct: 150 EALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAKKRLIPDGCGVKYVPSHGPL 206
>sp|A8D8X1|RL10_SHEEP 60S ribosomal protein L10 OS=Ovis aries GN=RPL10 PE=2 SV=1
Length = 214
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 40/57 (70%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPL 76
EALRRAKFKFP RQKI +S+KWGFTKF+ ++ +E R++PDG K GPL
Sbjct: 150 EALRRAKFKFPGRQKIHISKKWGFTKFNADEFENMVAEKRLIPDGCGVKYIPNRGPL 206
>sp|Q29195|RL10_PIG 60S ribosomal protein L10 OS=Sus scrofa GN=RPL10 PE=2 SV=3
Length = 214
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 40/57 (70%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPL 76
EALRRAKFKFP RQKI +S+KWGFTKF+ ++ +E R++PDG K GPL
Sbjct: 150 EALRRAKFKFPGRQKIHISKKWGFTKFNADEFENMVAEKRLIPDGCGVKYIPNRGPL 206
>sp|Q9XSI3|RL10_BOVIN 60S ribosomal protein L10 OS=Bos taurus GN=RPL10 PE=2 SV=4
Length = 214
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 40/57 (70%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPL 76
EALRRAKFKFP RQKI +S+KWGFTKF+ ++ +E R++PDG K GPL
Sbjct: 150 EALRRAKFKFPGRQKIHISKKWGFTKFNADEFENMVAEKRLIPDGCGVKYIPNRGPL 206
>sp|Q6PDV7|RL10_RAT 60S ribosomal protein L10 OS=Rattus norvegicus GN=Rpl10 PE=1 SV=3
Length = 214
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 40/57 (70%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPL 76
EALRRAKFKFP RQKI +S+KWGFTKF+ ++ +E R++PDG K GPL
Sbjct: 150 EALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNRGPL 206
>sp|A9CB60|RL10_PAPAN 60S ribosomal protein L10 OS=Papio anubis GN=RPL10 PE=3 SV=1
Length = 214
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 40/57 (70%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPL 76
EALRRAKFKFP RQKI +S+KWGFTKF+ ++ +E R++PDG K GPL
Sbjct: 150 EALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNRGPL 206
>sp|Q6ZWV3|RL10_MOUSE 60S ribosomal protein L10 OS=Mus musculus GN=Rpl10 PE=2 SV=3
Length = 214
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 40/57 (70%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPL 76
EALRRAKFKFP RQKI +S+KWGFTKF+ ++ +E R++PDG K GPL
Sbjct: 150 EALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNRGPL 206
>sp|P27635|RL10_HUMAN 60S ribosomal protein L10 OS=Homo sapiens GN=RPL10 PE=1 SV=4
Length = 214
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 40/57 (70%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPL 76
EALRRAKFKFP RQKI +S+KWGFTKF+ ++ +E R++PDG K GPL
Sbjct: 150 EALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNRGPL 206
>sp|Q4R7Y2|RL10_MACFA 60S ribosomal protein L10 OS=Macaca fascicularis GN=RPL10 PE=2 SV=1
Length = 214
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 40/57 (70%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPL 76
EALRRAKFKFP RQKI +S+KWGFTKF+ ++ +E R++PDG K GPL
Sbjct: 150 EALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNRGPL 206
>sp|Q9P769|RL10B_SCHPO 60S ribosomal protein L10-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl10b PE=3 SV=1
Length = 221
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPLADR 79
EALRR ++KFP +Q+IIVS+KWGF++++R +Y+ S I+PDG AK G L ++
Sbjct: 150 EALRRCQYKFPGQQRIIVSKKWGFSQYARDEYIEKRSRGEIIPDGCYAKFLNKRGSLQEK 209
>sp|Q09127|RL10A_SCHPO 60S ribosomal protein L10-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl10a PE=2 SV=2
Length = 221
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPLADR 79
EALRR ++KFP +Q+IIVS+KWGF++++R +Y+ S I+PDG AK G L ++
Sbjct: 150 EALRRCQYKFPGQQRIIVSKKWGFSQYARDEYIEKRSRGEIIPDGCYAKFLNKRGSLQEK 209
>sp|Q96L21|RL10L_HUMAN 60S ribosomal protein L10-like OS=Homo sapiens GN=RPL10L PE=1 SV=3
Length = 214
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 40/57 (70%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPL 76
EALRRAKFKFP RQKI +S+KWGFTKF+ ++ ++ ++PDG K HGPL
Sbjct: 150 EALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAKKCLIPDGCGVKYVPSHGPL 206
>sp|Q5R931|RL10_PONAB 60S ribosomal protein L10 OS=Pongo abelii GN=RPL10 PE=2 SV=3
Length = 214
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 40/57 (70%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPL 76
EALRRAKFKFP RQKI +S+KWGFTKF+ ++ +E R++PDG K GPL
Sbjct: 150 EALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYTPNRGPL 206
>sp|O96647|RL10_BOMMA 60S ribosomal protein L10 OS=Bombyx mandarina GN=RpL10 PE=2 SV=1
Length = 219
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 39/57 (68%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPL 76
EALRRAKFKFP RQKI VS+KWGFTK+ R ++ + E R+ DG + HGPL
Sbjct: 150 EALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEHGPL 206
>sp|Q08200|RL10_CHICK 60S ribosomal protein L10 (Fragment) OS=Gallus gallus GN=RPL10 PE=2
SV=1
Length = 210
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 39/57 (68%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPL 76
EALRRAKFKFP RQKI +S+KWGFTKF+ + ++ R++PDG K GPL
Sbjct: 145 EALRRAKFKFPGRQKIHISKKWGFTKFNADAFEEMVAQKRLIPDGCGVKYVPGRGPL 201
>sp|Q2TBW8|RL10L_BOVIN 60S ribosomal protein L10-like OS=Bos taurus GN=RPL10L PE=2 SV=1
Length = 214
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 40/57 (70%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPL 76
EALRRAKFKFP RQKI +S+KWGFTKF+ ++ ++ R++PDG K GPL
Sbjct: 150 EALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDKVAKKRLIPDGCGVKYVPNRGPL 206
>sp|P86048|RL10L_MOUSE 60S ribosomal protein L10-like OS=Mus musculus GN=Rpl10l PE=2 SV=1
Length = 214
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 39/57 (68%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPL 76
EALRRAKFKFP RQKI +S+KWGFTKF+ ++ + R++PDG K GPL
Sbjct: 150 EALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDKVAAKRLIPDGCGVKYIPERGPL 206
>sp|P41805|RL10_YEAST 60S ribosomal protein L10 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL10 PE=1 SV=1
Length = 221
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPLAD 78
E LRRA++KFP +QKII+S+KWGFT R +YL+ + DG K G L +
Sbjct: 150 EGLRRARYKFPGQQKIILSKKWGFTNLDRPEYLKKREAGEVKDDGAFVKFLSKKGSLEN 208
>sp|Q39724|RL10_EUGGR 60S ribosomal protein L10 OS=Euglena gracilis GN=RPL10 PE=2 SV=1
Length = 215
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 21 ALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDGMNAKLFGCHGPL 76
AL+RA +KF RQ I S WGFT+ +Y++W E + DG++ K+ G L
Sbjct: 151 ALKRASYKFAGRQVIAKSTMWGFTEIRSENYVKWKEEGKFRVDGVSTKILRNRGRL 206
>sp|Q8SR96|RL10_ENCCU 60S ribosomal protein L10 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL10 PE=1 SV=1
Length = 219
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%)
Query: 20 EALRRAKFKFPVRQKIIVSRKWGFTKFSRADYLRWNSENRIVPDG 64
EALRRAK KFP QKI VS K+GFT ++ + N RI+ G
Sbjct: 150 EALRRAKNKFPGHQKIQVSSKFGFTNMFSDEFNKLNESGRIILRG 194
>sp|Q0IHH9|SPOPB_XENLA Speckle-type POZ protein B OS=Xenopus laevis GN=spop-b PE=2 SV=1
Length = 374
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 16/55 (29%)
Query: 24 RAKFKFPVRQ---------------KIIVSRKWGFTKFSRADYLRWNSENRIVPD 63
RAKFKF + + + + WGF KF R D+L + N ++PD
Sbjct: 99 RAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFL-LDEANGLLPD 152
>sp|Q6P8B3|SPOP_XENTR Speckle-type POZ protein OS=Xenopus tropicalis GN=spop PE=2 SV=1
Length = 374
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 16/55 (29%)
Query: 24 RAKFKFPVRQ---------------KIIVSRKWGFTKFSRADYLRWNSENRIVPD 63
RAKFKF + + + + WGF KF R D+L + N ++PD
Sbjct: 99 RAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFL-LDEANGLLPD 152
>sp|Q7ZX06|SPOPA_XENLA Speckle-type POZ protein A OS=Xenopus laevis GN=spop-a PE=2 SV=1
Length = 374
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 16/55 (29%)
Query: 24 RAKFKFPVRQ---------------KIIVSRKWGFTKFSRADYLRWNSENRIVPD 63
RAKFKF + + + + WGF KF R D+L + N ++PD
Sbjct: 99 RAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFL-LDEANGLLPD 152
>sp|Q7T330|SPOP_DANRE Speckle-type POZ protein OS=Danio rerio GN=spop PE=2 SV=1
Length = 374
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 16/55 (29%)
Query: 24 RAKFKFPVRQ---------------KIIVSRKWGFTKFSRADYLRWNSENRIVPD 63
RAKFKF + + + + WGF KF R D+L + N ++PD
Sbjct: 99 RAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFL-LDEANGLLPD 152
>sp|Q5NVK7|SPOP_PONAB Speckle-type POZ protein OS=Pongo abelii GN=SPOP PE=1 SV=1
Length = 374
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 16/55 (29%)
Query: 24 RAKFKFPVRQ---------------KIIVSRKWGFTKFSRADYLRWNSENRIVPD 63
RAKFKF + + + + WGF KF R D+L + N ++PD
Sbjct: 99 RAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFL-LDEANGLLPD 152
>sp|Q6ZWS8|SPOP_MOUSE Speckle-type POZ protein OS=Mus musculus GN=Spop PE=1 SV=1
Length = 374
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 16/55 (29%)
Query: 24 RAKFKFPVRQ---------------KIIVSRKWGFTKFSRADYLRWNSENRIVPD 63
RAKFKF + + + + WGF KF R D+L + N ++PD
Sbjct: 99 RAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFL-LDEANGLLPD 152
>sp|O43791|SPOP_HUMAN Speckle-type POZ protein OS=Homo sapiens GN=SPOP PE=1 SV=1
Length = 374
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 16/55 (29%)
Query: 24 RAKFKFPVRQ---------------KIIVSRKWGFTKFSRADYLRWNSENRIVPD 63
RAKFKF + + + + WGF KF R D+L + N ++PD
Sbjct: 99 RAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFL-LDEANGLLPD 152
>sp|Q0VCW1|SPOP_BOVIN Speckle-type POZ protein OS=Bos taurus GN=SPOP PE=2 SV=1
Length = 374
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 16/55 (29%)
Query: 24 RAKFKFPVRQ---------------KIIVSRKWGFTKFSRADYLRWNSENRIVPD 63
RAKFKF + + + + WGF KF R D+L + N ++PD
Sbjct: 99 RAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFL-LDEANGLLPD 152
>sp|A0QDN6|Y1800_MYCA1 UPF0310 protein MAV_1800 OS=Mycobacterium avium (strain 104)
GN=MAV_1800 PE=3 SV=1
Length = 138
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 45 KFSRADYLRWNSENRIVPDGMNAKLFGCHGPLADRQPGRA 84
K +R D++ + S + PDG + F G +AD +P RA
Sbjct: 34 KMARGDWIVFYSPKTVYPDGEPLQAFTAIGQVADDEPYRA 73
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.446
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,842,387
Number of Sequences: 539616
Number of extensions: 1184728
Number of successful extensions: 2863
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2825
Number of HSP's gapped (non-prelim): 46
length of query: 90
length of database: 191,569,459
effective HSP length: 60
effective length of query: 30
effective length of database: 159,192,499
effective search space: 4775774970
effective search space used: 4775774970
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)