BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043057
(236 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449444194|ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cucumis
sativus]
Length = 1198
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 127/251 (50%), Gaps = 52/251 (20%)
Query: 27 EDNFVEYVEFNEVQHRRRAIFGYGVDSGDQKDSYEEGED-DDSD---------------- 69
ED+ E+VEF+E + RR+A+FG V+S D DS EEG D DDSD
Sbjct: 502 EDHMKEHVEFHEGRFRRKAVFGNDVESDDLMDSDEEGNDGDDSDINDEKMSDYDEDDEQD 561
Query: 70 EGADDDNDTVDNQLSSGTEEREDNDDARISFSLYTGNQHQHQKLSKEVHDSSKGEENDDD 129
+ + LS T R+ + ++ +Y + S E HD+S EEND
Sbjct: 562 DAGMGNTSKWKEPLSERTRSRQHVNLMKL---VYGKSTDISTTSSNEAHDTS-DEENDGG 617
Query: 130 EFFKP-----KVKGNKEEA----------------------YESIRDRFVMGDWSKAAQK 162
+FF P KV N E ESIRDRFV GDWSKAA +
Sbjct: 618 DFFTPVGRINKVHSNDSEVVDGENANSEDCSKHFKISNDLDIESIRDRFVTGDWSKAALR 677
Query: 163 NQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNSGSEGIENEDESAVEEWRLKKLT 222
N+ SE ++DD+V+ D+EDLET EK+E +N+ ++ ++S +EE RLKKL
Sbjct: 678 NK----SSEVIENDDSVFADFEDLETGEKYESFHAENTTDATVQTTEDSTIEERRLKKLA 733
Query: 223 LRAKFDAQYPF 233
RA+FDA+YPF
Sbjct: 734 RRAQFDAEYPF 744
>gi|224133372|ref|XP_002328026.1| predicted protein [Populus trichocarpa]
gi|222837435|gb|EEE75814.1| predicted protein [Populus trichocarpa]
Length = 1181
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 104/297 (35%), Positives = 145/297 (48%), Gaps = 74/297 (24%)
Query: 1 MEDSKSSDEDADIKKGEILKSVSD-SDE-------------DNFVEYVEFNEVQHRRRAI 46
++ S+S+DED +K ++ SD SDE D E VEF+ + RR+A+
Sbjct: 450 LDGSESTDEDEAAQKDAVVNGESDGSDEEHGTAAKQKADPQDRMKEQVEFHGGRLRRKAM 509
Query: 47 FGYGVDSGDQKDSYEEGEDDDSDEGADDDNDTVDNQLS---SGTEEREDNDDARIS---- 99
FG +D D KD DEG++ D+D D LS E+R++ D IS
Sbjct: 510 FGNDIDDKDLKDC---------DEGSESDDDVGDQSLSDSEFSEEDRDEEDMGNISKWKE 560
Query: 100 ------FSLYTGNQHQH---QKLSKEVHDSSKGEEND--DDEFFKPKVKGNK-------- 140
FS N Q + S +++ G E++ DDEFFK K +GNK
Sbjct: 561 SLVDRTFSKQNNNLMQRVYGKSASTPINEKQDGSEDEESDDEFFKLKGEGNKKLREGFDV 620
Query: 141 ----------------------EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDA 178
EE YESIRDRFV GDWSKAAQ+N++ EDD +D+
Sbjct: 621 ENVDADECSKFTNYSDLKNWKDEEIYESIRDRFVTGDWSKAAQRNKLPTANDEDD--EDS 678
Query: 179 VYGDYEDLETCEKHEGQCEDNSGSEGIENEDESAVEEWRLKKLTLRAKFDAQYPFSF 235
VYGD+EDLET EKH ++ SG+ ++ EDE E+ +LKKL L + D ++ F
Sbjct: 679 VYGDFEDLETGEKHGNHQKEESGNVSMQKEDELE-EQRKLKKLALHEEVDEKHGAKF 734
>gi|414866658|tpg|DAA45215.1| TPA: hypothetical protein ZEAMMB73_557479 [Zea mays]
Length = 722
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 123/255 (48%), Gaps = 73/255 (28%)
Query: 32 EYVEFNEVQHRRRAIFGYGVDSGDQKDSYEEGEDDDSDEGADDDNDTVDNQLS------- 84
E VE + RRRA+ S + +D ++ D+ +DE A+DD D+ D+QLS
Sbjct: 487 EEVEVCNGRLRRRAV------SANFRDDFD---DEGTDEDANDDEDSGDDQLSGDSASSA 537
Query: 85 --SGTEEREDNDDARISFSLYTGNQHQHQ-KLSKEVHD------SSKGEENDD------- 128
SG + E + ++ SL + L + V+ S EENDD
Sbjct: 538 DDSGEAKDELENTSKWKESLLARTMSRRSDNLMQLVYGLPSTKLGSVAEENDDSEANSSD 597
Query: 129 DEFFKPKVKGNKEEA-------------------------------YESIRDRFVMGDWS 157
DEFF+PK G K++A +SIRDRFV G+WS
Sbjct: 598 DEFFRPK--GQKQQAKNESPSFGDIDGEDCSKFFKAELKDWSNEDLIKSIRDRFVTGNWS 655
Query: 158 KAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNSGSEGIENEDESAVEEWR 217
KA + Q + + EDD+ +YGD+EDLET E H Q ++N +E +D+ VEE R
Sbjct: 656 KATLRGQDTDDRGEDDEE---MYGDFEDLETGEVHMAQTDEN-----VEAKDDPEVEERR 707
Query: 218 LKKLTLRAKFDAQYP 232
LKKL RAKFDAQYP
Sbjct: 708 LKKLAQRAKFDAQYP 722
>gi|414866659|tpg|DAA45216.1| TPA: hypothetical protein ZEAMMB73_557479 [Zea mays]
Length = 725
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 123/259 (47%), Gaps = 78/259 (30%)
Query: 32 EYVEFNEVQHRRRAIFGYGVDSGDQKDSYEEGEDDDSDEGADDDNDTVDNQLS------- 84
E VE + RRRA+ S + +D ++ D+ +DE A+DD D+ D+QLS
Sbjct: 487 EEVEVCNGRLRRRAV------SANFRDDFD---DEGTDEDANDDEDSGDDQLSGDSASSA 537
Query: 85 --SG-----------TEEREDNDDARISFSLYTGNQHQHQKLSKEVHDSSKGEENDD--- 128
SG T + +++ AR + S + N Q S EENDD
Sbjct: 538 DDSGEASDPEDELENTSKWKESLLAR-TMSRRSDNLMQLVYGLPSTKLGSVAEENDDSEA 596
Query: 129 ----DEFFKPKVKGNKEEA-------------------------------YESIRDRFVM 153
DEFF+PK G K++A +SIRDRFV
Sbjct: 597 NSSDDEFFRPK--GQKQQAKNESPSFGDIDGEDCSKFFKAELKDWSNEDLIKSIRDRFVT 654
Query: 154 GDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNSGSEGIENEDESAV 213
G+WSKA + Q + + EDD+ +YGD+EDLET E H Q ++N +E +D+ V
Sbjct: 655 GNWSKATLRGQDTDDRGEDDEE---MYGDFEDLETGEVHMAQTDEN-----VEAKDDPEV 706
Query: 214 EEWRLKKLTLRAKFDAQYP 232
EE RLKKL RAKFDAQYP
Sbjct: 707 EERRLKKLAQRAKFDAQYP 725
>gi|449533278|ref|XP_004173603.1| PREDICTED: ribosome biogenesis protein BMS1 homolog, partial
[Cucumis sativus]
Length = 304
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 105/212 (49%), Gaps = 51/212 (24%)
Query: 66 DDSDEGAD-DDNDTVDNQLSSGTEEREDNDDARISFSLYT------GNQHQHQKLSK--- 115
D +EG D DD+D D ++S E+ E +D + S + QH L K
Sbjct: 1 DSDEEGNDGDDSDINDEKMSDYDEDDEQDDAGMGNTSKWKEPLSERTRSRQHVNLMKLVY 60
Query: 116 ------------EVHDSSKGEENDDDEFFKPKVKGNKEEA-------------------- 143
E HD+S EEND +FF P + NK ++
Sbjct: 61 GKSTDISTTSSNEAHDTSD-EENDGGDFFTPVGRINKNDSEVVVGENANSEDCSKHFKIS 119
Query: 144 ----YESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDN 199
ESIRDRFV GDWSKAA +N+ SE ++DD+V+ D+EDLET EK+E +N
Sbjct: 120 NDLDIESIRDRFVTGDWSKAALRNK----SSEVIENDDSVFADFEDLETGEKYESFHAEN 175
Query: 200 SGSEGIENEDESAVEEWRLKKLTLRAKFDAQY 231
+ ++ ++S +EE RLKKL RA+FDA+Y
Sbjct: 176 TTDATVQTTEDSTIEERRLKKLARRAQFDAEY 207
>gi|108707986|gb|ABF95781.1| expressed protein [Oryza sativa Japonica Group]
gi|215765682|dbj|BAG87379.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 431
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 113/209 (54%), Gaps = 32/209 (15%)
Query: 52 DSGDQKDSYEEGEDDDSDEGADDDNDTVDNQ-----LSSGTEEREDNDDARISFS----- 101
+SGD D EG DDS+E D D++T +N L + T R + ++ +
Sbjct: 225 NSGD--DQLSEGSADDSEESLDSDDETENNSKWKESLLARTLSRRSANLMQLVYGQASKK 282
Query: 102 LYTGNQHQHQKLSKEVHDSSKGEEN---------------DDDEFFKPKVK-GNKEEAYE 145
L GN ++ S E KG++ D +FFK +++ + E+ +
Sbjct: 283 LDEGNDSSAEESSDEEFFVPKGQKKQAKNESTSFDDMDAEDYSKFFKTELRDWSDEDLIK 342
Query: 146 SIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQC-EDNSGSEG 204
SIRDRFV G+WSKAA + Q +E+D D+ V GD+EDLET E H + E+ SG+ G
Sbjct: 343 SIRDRFVTGNWSKAALRGQEI---NENDVDDEEVDGDFEDLETGEVHTSKAYENTSGNGG 399
Query: 205 IENEDESAVEEWRLKKLTLRAKFDAQYPF 233
+D+ A+EE RLKKL L+AKFDA+YPF
Sbjct: 400 THKQDDLAMEERRLKKLALKAKFDAEYPF 428
>gi|242041043|ref|XP_002467916.1| hypothetical protein SORBIDRAFT_01g036270 [Sorghum bicolor]
gi|241921770|gb|EER94914.1| hypothetical protein SORBIDRAFT_01g036270 [Sorghum bicolor]
Length = 1184
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 71/110 (64%), Gaps = 13/110 (11%)
Query: 127 DDDEFFKPKVK-GNKEEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDA--VYGDY 183
D +FFK +++ + E+ +SIRDRFV G+WSKAA + G+ D++ +D +YGD+
Sbjct: 625 DCSKFFKAELRDWSNEDLIKSIRDRFVTGNWSKAALR-----GQDADENGEDGEEIYGDF 679
Query: 184 EDLETCEKHEGQCEDNSGSEGIENEDESAVEEWRLKKLTLRAKFDAQYPF 233
EDLET E H Q +++ E +D+ VEE RLKKL LRAKFDAQ +
Sbjct: 680 EDLETGEVHMSQAVEDA-----ERKDDPEVEERRLKKLALRAKFDAQLTY 724
>gi|302760207|ref|XP_002963526.1| hypothetical protein SELMODRAFT_165786 [Selaginella moellendorffii]
gi|300168794|gb|EFJ35397.1| hypothetical protein SELMODRAFT_165786 [Selaginella moellendorffii]
Length = 1120
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 60/93 (64%), Gaps = 19/93 (20%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNS 200
+E E+IRDRFV GDW+KA+Q+ KG+ E+D + VYGD+EDLET E+H G E++
Sbjct: 609 QEVIEAIRDRFVTGDWNKASQRQ---KGEVEEDGT---VYGDFEDLETGEQH-GAAENHE 661
Query: 201 GSEGIENEDESAVEEWRLKKLTLRAKFDAQYPF 233
+E RLKKL LRA FDA+YPF
Sbjct: 662 AAER------------RLKKLALRAAFDAKYPF 682
>gi|302799593|ref|XP_002981555.1| hypothetical protein SELMODRAFT_179002 [Selaginella moellendorffii]
gi|300150721|gb|EFJ17370.1| hypothetical protein SELMODRAFT_179002 [Selaginella moellendorffii]
Length = 1113
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 60/93 (64%), Gaps = 19/93 (20%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNS 200
+E E+IRDRFV GDW+KA+Q+ KG+ E+ DD VYGD+EDLET E+H
Sbjct: 605 QEVIEAIRDRFVTGDWNKASQRQ---KGEVEE---DDLVYGDFEDLETGEQHVAA----- 653
Query: 201 GSEGIENEDESAVEEWRLKKLTLRAKFDAQYPF 233
EN +++ E RLKKL LRA FDA+YPF
Sbjct: 654 -----ENHEDA---ERRLKKLALRAAFDAKYPF 678
>gi|357112362|ref|XP_003557978.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Brachypodium
distachyon]
Length = 1178
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 71/107 (66%), Gaps = 7/107 (6%)
Query: 127 DDDEFFKPKVK-GNKEEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYED 185
D +FFK ++ + E+ +SIRDRFV GDWSKA+ + + E+ + D+ + GD+ED
Sbjct: 619 DYSKFFKAELNDWSDEDLAKSIRDRFVTGDWSKASLRG---REIDENGEGDEEIDGDFED 675
Query: 186 LETCEKHEGQCEDN-SGSEGIENEDESAVEEWRLKKLTLRAKFDAQY 231
LET E H+ Q +N SG G+ +DE VEE RLKKL L+AKFD++Y
Sbjct: 676 LETGEVHKSQAAENGSGKPGV--QDELKVEELRLKKLALKAKFDSEY 720
>gi|115452841|ref|NP_001050021.1| Os03g0333100 [Oryza sativa Japonica Group]
gi|113548492|dbj|BAF11935.1| Os03g0333100 [Oryza sativa Japonica Group]
Length = 1180
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 111/207 (53%), Gaps = 32/207 (15%)
Query: 52 DSGDQKDSYEEGEDDDSDEGADDDNDTVDNQ-----LSSGTEEREDNDDARISFS----- 101
+SGD D EG DDS+E D D++T +N L + T R + ++ +
Sbjct: 519 NSGD--DQLSEGSADDSEESLDSDDETENNSKWKESLLARTLSRRSANLMQLVYGQASKK 576
Query: 102 LYTGNQHQHQKLSKEVHDSSKGEEN---------------DDDEFFKPKVK-GNKEEAYE 145
L GN ++ S E KG++ D +FFK +++ + E+ +
Sbjct: 577 LDEGNDSSAEESSDEEFFVPKGQKKQAKNESTSFDDMDAEDYSKFFKTELRDWSDEDLIK 636
Query: 146 SIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQC-EDNSGSEG 204
SIRDRFV G+WSKAA + Q +E+D D+ V GD+EDLET E H + E+ SG+ G
Sbjct: 637 SIRDRFVTGNWSKAALRGQEI---NENDVDDEEVDGDFEDLETGEVHTSKAYENTSGNGG 693
Query: 205 IENEDESAVEEWRLKKLTLRAKFDAQY 231
+D+ A+EE RLKKL L+AKFDA+Y
Sbjct: 694 THKQDDLAMEERRLKKLALKAKFDAEY 720
>gi|255552531|ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
gi|223543572|gb|EEF45102.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
Length = 825
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 60/111 (54%), Gaps = 33/111 (29%)
Query: 131 FFKPKVKGNK------------------------------EEAYESIRDRFVMGDWSKAA 160
FFKPK +GNK E+ YESIRDRFV GDWSKAA
Sbjct: 584 FFKPKGEGNKKLNEGLDGTNINTEDCSKFTNYTDLKNWKEEDIYESIRDRFVTGDWSKAA 643
Query: 161 QKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNSGSEGIENEDES 211
++NQ S EDDD VYGD+EDLET E++E +D SG+ +E EDE
Sbjct: 644 KRNQPSDANMEDDDD---VYGDFEDLETGERYESCKKDESGNGALEKEDEP 691
>gi|359477919|ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis
vinifera]
Length = 1139
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 110/244 (45%), Gaps = 65/244 (26%)
Query: 27 EDNFVEYVEFNEVQHRRRAIFGYGVD----------------------------SGDQKD 58
+DN E +EF++ + RR+AIFG +D SG
Sbjct: 454 KDNVEEKIEFHDGRLRRKAIFGDDIDDDLKVIILLHDLDEDDEENEDDGDNLSFSGSY-S 512
Query: 59 SYEEGEDDDSDEGADDDNDTVDNQLSSGTEEREDNDDARISFSLYTGNQHQHQKLSK-EV 117
S E+GED +D D+ V S E + + +Y H S E
Sbjct: 513 SEEDGEDQKTD---GDEMGNVSKWKESLVERTIPKQNTNLMRLVYGEESASHSTNSVDEA 569
Query: 118 HDSSKGEENDDDEFFKPKVKGNKE------------------------------EAYESI 147
H SS+ EE++DDEFFKPK +GNK+ E ESI
Sbjct: 570 HHSSEDEESEDDEFFKPKGEGNKKLREGLGSGHVNAEDCSKFTNHANLKKWKEVEIVESI 629
Query: 148 RDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNSGSEGIEN 207
RDRF+ GDWSKAA + QV + S+ DD D VYG++EDLET E++ Q ++G++ I
Sbjct: 630 RDRFITGDWSKAASRGQVLETGSDRDDDD--VYGEFEDLETGEQYRSQEAGDAGNDAIHK 687
Query: 208 EDES 211
E+ S
Sbjct: 688 ENGS 691
>gi|168041248|ref|XP_001773104.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675651|gb|EDQ62144.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1095
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 86/179 (48%), Gaps = 55/179 (30%)
Query: 98 IS------------FSLYTGNQHQHQKLSKEVHDSSKGEENDDDEFFKPKVKGNK----- 140
+ L G Q Q S + DS +++D+E F+ + + ++
Sbjct: 491 FARALANVEKKIDLMRLVYGQQETLQGSSLQNQDS----DSEDEELFRLRNERHQVHDAD 546
Query: 141 -------------------EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDS----DD 177
E ESIRDRFV GDW+KAA + + +S DDD+ DD
Sbjct: 547 AEDCSRLDKDPNSFQDWRNPEVIESIRDRFVTGDWNKAANRGKAR--ESADDDTEMFGDD 604
Query: 178 AVYGDYEDLETCEKH-----EGQCEDNSGSEGIENEDESAVEEWRLKKLTLRAKFDAQY 231
V+GD+EDLET E+H EG E+++ G+ E+ E+ RLKKL LRA+FDAQY
Sbjct: 605 EVFGDFEDLETGEQHVAANPEGDAEEDAKPGGLSAEE----EDRRLKKLALRARFDAQY 659
>gi|297848950|ref|XP_002892356.1| hypothetical protein ARALYDRAFT_470695 [Arabidopsis lyrata subsp.
lyrata]
gi|297338198|gb|EFH68615.1| hypothetical protein ARALYDRAFT_470695 [Arabidopsis lyrata subsp.
lyrata]
Length = 1148
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 48/74 (64%), Gaps = 8/74 (10%)
Query: 141 EEAYESIRDRFVMGDWSKAAQ--KNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCED 198
+E ESIRDRF GDWSKAA KN + G+ EDD+ +YGD+EDLET EKH+
Sbjct: 632 KEVCESIRDRFTTGDWSKAALRDKNLGTGGEGEDDE----LYGDFEDLETGEKHKSHVNM 687
Query: 199 NSGSEGIENEDESA 212
SG+ ENEDE A
Sbjct: 688 ESGAN--ENEDEDA 699
>gi|298205174|emb|CBI17233.3| unnamed protein product [Vitis vinifera]
Length = 1305
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 59/114 (51%), Gaps = 32/114 (28%)
Query: 116 EVHDSSKGEENDDDEFFKPKVKGNKE------------------------------EAYE 145
E H SS+ EE++DDEFFKPK +GNK+ E E
Sbjct: 677 EAHHSSEDEESEDDEFFKPKGEGNKKLREGLGSGHVNAEDCSKFTNHANLKKWKEVEIVE 736
Query: 146 SIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDN 199
SIRDRF+ GDWSKAA + QV + S+ DD D VYG++EDLET C N
Sbjct: 737 SIRDRFITGDWSKAASRGQVLETGSDRDDDD--VYGEFEDLETGGLRSLLCVQN 788
>gi|356544500|ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
Length = 1181
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 107/235 (45%), Gaps = 51/235 (21%)
Query: 32 EYVEFNEVQHRRRAIFGYGVDSGDQKDSYEEGEDDDSDEGADDDNDTVDNQLSSGTEERE 91
E+++F + + RRRAIFG VD D DS EG++D + D ++ + + + ++
Sbjct: 501 EHIDFQDGRWRRRAIFGNDVDQNDLMDS--EGDEDGATSNDDVESSEEEEEDGNDNDDTN 558
Query: 92 DNDDARIS----------FSLYTGNQHQHQKLSKEVHDSSKGEEND-------DDEFFKP 134
++D +S S T + Q ++ ++ END DD+FFKP
Sbjct: 559 EDDTGNVSKWKESLAERTLSRKTPSLMQLVYGESTINSTTINRENDNSGDEESDDDFFKP 618
Query: 135 --KVKG-------------NKEEAY---------------ESIRDRFVMGDWSKAAQKNQ 164
+VK N E+ E IR+RFV G+ +KAA +N
Sbjct: 619 IEEVKKLNMRDGLNDDGMFNTEDCAKCTQFVVQRWDENDNEEIRNRFVSGNVAKAALRNA 678
Query: 165 VSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNSGSEGIENEDESAVEEWRLK 219
+ +E+D+ D VY D+EDLET EKHE D + + D+ EE RLK
Sbjct: 679 LPAANTEEDNDD--VYADFEDLETGEKHENHRTDAAFAATTHKGDDLEAEERRLK 731
>gi|7523707|gb|AAF63146.1|AC011001_16 Putative membrane protein [Arabidopsis thaliana]
Length = 1138
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 68/132 (51%), Gaps = 38/132 (28%)
Query: 113 LSKEVHDSSKGEENDDDEFFKPK-----------------------------VKGNKE-E 142
L E HD S +E+DD++FFKPK +K KE E
Sbjct: 573 LINENHDISDDDESDDEDFFKPKGEQHKNLGGGLDVGYVNSEDCSKFVNYGYLKNWKEKE 632
Query: 143 AYESIRDRFVMGDWSKAAQ--KNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNS 200
ESIRDRF GDWSKAA KN + G+ EDD+ +YGD+EDLET EKH+ S
Sbjct: 633 VCESIRDRFTTGDWSKAALRDKNLGTGGEGEDDE----LYGDFEDLETGEKHKSHENLES 688
Query: 201 GSEGIENEDESA 212
G+ ENEDE A
Sbjct: 689 GAN--ENEDEDA 698
>gi|15222176|ref|NP_172157.1| BMS1 and NUC121 domain-containing protein [Arabidopsis thaliana]
gi|332189907|gb|AEE28028.1| BMS1 and NUC121 domain-containing protein [Arabidopsis thaliana]
Length = 1147
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 68/132 (51%), Gaps = 38/132 (28%)
Query: 113 LSKEVHDSSKGEENDDDEFFKPK-----------------------------VKGNKE-E 142
L E HD S +E+DD++FFKPK +K KE E
Sbjct: 573 LINENHDISDDDESDDEDFFKPKGEQHKNLGGGLDVGYVNSEDCSKFVNYGYLKNWKEKE 632
Query: 143 AYESIRDRFVMGDWSKAAQ--KNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNS 200
ESIRDRF GDWSKAA KN + G+ EDD+ +YGD+EDLET EKH+ S
Sbjct: 633 VCESIRDRFTTGDWSKAALRDKNLGTGGEGEDDE----LYGDFEDLETGEKHKSHENLES 688
Query: 201 GSEGIENEDESA 212
G+ ENEDE A
Sbjct: 689 GAN--ENEDEDA 698
>gi|167520270|ref|XP_001744474.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776805|gb|EDQ90423.1| predicted protein [Monosiga brevicollis MX1]
Length = 990
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 18/153 (11%)
Query: 92 DNDDARISFSLYTGNQHQHQKLSKEVHDSSKGEENDDDEFFKPKVKGNKEEAYESIRDRF 151
D DD +S + + ++ + E+ DSS+ D ++ E SIRDRF
Sbjct: 411 DEDDLFKVWSCWAPMRLDIKRPALEISDSSR-----PDVLLTVAHDWSQPEVLASIRDRF 465
Query: 152 VMGDWSKAAQKNQVSK----GKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNS------- 200
V G W ++ + + + + D+ VYGD+EDLET EKHEG D+
Sbjct: 466 VTGKWDASSDAATLLRHHEAALAGEMSEDEEVYGDFEDLETGEKHEGLFSDDGDNEEGPA 525
Query: 201 -GSEGIEN-EDESAVEEWRLKKLTLRAKFDAQY 231
G +++ +D SA E KK ++A FD +Y
Sbjct: 526 DGEAAVKSKKDMSATERRAFKKARMKALFDDEY 558
>gi|356541129|ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
Length = 1176
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 48/224 (21%)
Query: 32 EYVEFNEVQHRRRAIFGYGVDSGDQKDS-------------YEEGEDDDSDEGADDDNDT 78
E++EF++ + RRRAIFG VD D DS E+++ D DD N+
Sbjct: 506 EHIEFHDGRQRRRAIFGNDVDQNDLMDSEGDDDGDTSDDDVESSEEEEEDDNDNDDTNED 565
Query: 79 VDNQLSSGTEEREDNDDARISFSLYTGNQHQHQKLSKEVH--DSSKGEENDDDEFFKPKV 136
+S E + + +R + SL + S ++ + + G+E DD+FFKP
Sbjct: 566 NMGNVSKWKESLAERNLSRKTPSLMQLVYGESTINSTTINRDNDNSGDEESDDDFFKPIE 625
Query: 137 KGNKEEAYESIRD------------------------------RFVMGDWSKAAQKNQVS 166
+ K+ + + D RFV G+ +KAA +N +
Sbjct: 626 EVKKQNVRDGLNDDGMVNTEDCSKCTQFVDQRWDENDNEEIRNRFVTGNLAKAALRNALP 685
Query: 167 KGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNSGSEGIENEDE 210
+E+++ D VYGD+EDLET EKHE D+ + G ENED+
Sbjct: 686 AANTEEENDD--VYGDFEDLETGEKHENHQTDDEDT-GNENEDK 726
>gi|308810096|ref|XP_003082357.1| unnamed protein product [Ostreococcus tauri]
gi|116060825|emb|CAL57303.1| unnamed protein product [Ostreococcus tauri]
Length = 1161
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 132 FKPKVKGNKEEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEK 191
F P+V+ + + S+R+RFV GDW A + + +K ++E+D+ DD VYGD+EDLET EK
Sbjct: 588 FLPEVRSSLDIDDPSLRNRFVTGDWDAAKARGE-AKPQAENDE-DDEVYGDFEDLETGEK 645
>gi|260837443|ref|XP_002613713.1| hypothetical protein BRAFLDRAFT_286746 [Branchiostoma floridae]
gi|229299102|gb|EEN69722.1| hypothetical protein BRAFLDRAFT_286746 [Branchiostoma floridae]
Length = 1243
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 8/55 (14%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
EE Y+ I+D FV GDW K Q+ + D+A+YGD+EDLET E H Q
Sbjct: 703 EEIYDLIKDCFVTGDWGTQDAKRQL--------EEDEALYGDFEDLETGETHTAQ 749
>gi|410927151|ref|XP_003977028.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Takifugu
rubripes]
Length = 1174
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 139 NKEEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCED 198
N EE + SIRD F+ G W + K DD +YGD+EDLET E H G+ +
Sbjct: 639 NSEEMFNSIRDCFITGKWDATQDAATLLK-------QDDELYGDFEDLETGEVHVGKSGE 691
Query: 199 NSGSEGIE 206
+ E +E
Sbjct: 692 PNADENME 699
>gi|424513564|emb|CCO66186.1| predicted protein [Bathycoccus prasinos]
Length = 1168
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 132 FKPKVKGNKEEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEK 191
F +++G + + ++R+RFV GDW A + + ++ E DD VYGD+EDLET EK
Sbjct: 574 FIHQMRGKLDVSDPALRNRFVTGDWDAAGARAE-AQPLDESAMDDDEVYGDFEDLETGEK 632
Query: 192 HEGQCEDNSG 201
G+ +G
Sbjct: 633 FAGKDSKKAG 642
>gi|159480788|ref|XP_001698464.1| hypothetical protein CHLREDRAFT_113591 [Chlamydomonas reinhardtii]
gi|158282204|gb|EDP07957.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1139
Score = 45.1 bits (105), Expect = 0.026, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 146 SIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEG 194
++R+RFV GDW++ ++ + G S+ D DD V+GD+ED+E E+ G
Sbjct: 642 ALRNRFVTGDWAEGQRRAEARPGGSDQD--DDEVFGDFEDMEAGERLAG 688
>gi|73997955|ref|XP_534956.2| PREDICTED: ribosome biogenesis protein BMS1 homolog isoform 1
[Canis lupus familiaris]
Length = 1287
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNS 200
EE SIRD FV G W + +K +ED++ +YGD+EDLET + H+G+ + ++
Sbjct: 753 EEVMNSIRDCFVTGKWE---EDKDAAKILAEDEE----LYGDFEDLETGDVHKGKSDPDT 805
Query: 201 GSEGIE---------NEDESAVEEWRLKKLTLRAKFDAQY 231
E +E + +ESA ++ KK L+ FDA+Y
Sbjct: 806 QIEDVEEVNKEEIDPSTEESARKKHLDKKRKLKEMFDAEY 845
>gi|410340949|gb|JAA39421.1| BMS1 homolog, ribosome assembly protein [Pan troglodytes]
Length = 1282
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNS 200
EE SIRD FV G W + +K +ED++ +YGD+EDLET + H+G+ N+
Sbjct: 748 EEVMNSIRDCFVTGKWE---EDKDAAKVLAEDEE----LYGDFEDLETGDVHKGKSGPNT 800
Query: 201 GSEGIENE 208
+E IE E
Sbjct: 801 QNEDIEKE 808
>gi|114630270|ref|XP_001155329.1| PREDICTED: ribosome biogenesis protein BMS1 homolog isoform 4 [Pan
troglodytes]
Length = 1282
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNS 200
EE SIRD FV G W + +K +ED++ +YGD+EDLET + H+G+ N+
Sbjct: 748 EEVMNSIRDCFVTGKWE---EDKDAAKVLAEDEE----LYGDFEDLETGDVHKGKSGPNT 800
Query: 201 GSEGIENE 208
+E IE E
Sbjct: 801 QNEDIEKE 808
>gi|195441226|ref|XP_002068417.1| GK20458 [Drosophila willistoni]
gi|194164502|gb|EDW79403.1| GK20458 [Drosophila willistoni]
Length = 1160
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNS 200
EE + I++ FV G W KA++ + + D++ VYGD+EDLET E+H+G+ +D+
Sbjct: 609 EENKDLIKNCFVTGKW-KASEDAETLLRLDDMSDAESEVYGDFEDLETGEQHKGKPKDD- 666
Query: 201 GSEGIENEDESAVEEWRLKKL 221
G EG E +A + +L ++
Sbjct: 667 GEEGQTEEPATAAVKRKLTRV 687
>gi|222624872|gb|EEE59004.1| hypothetical protein OsJ_10724 [Oryza sativa Japonica Group]
Length = 1130
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 82/165 (49%), Gaps = 31/165 (18%)
Query: 52 DSGDQKDSYEEGEDDDSDEGADDDNDTVDNQ-----LSSGTEEREDNDDARISFS----- 101
+SGD D EG DDS+E D D++T +N L + T R + ++ +
Sbjct: 519 NSGD--DQLSEGSADDSEESLDSDDETENNSKWKESLLARTLSRRSANLMQLVYGQASKK 576
Query: 102 LYTGNQHQHQKLSKEVHDSSKGEEN---------------DDDEFFKPKVK-GNKEEAYE 145
L GN ++ S E KG++ D +FFK +++ + E+ +
Sbjct: 577 LDEGNDSSAEESSDEEFFVPKGQKKQAKNESTSFDDMDAEDYSKFFKTELRDWSDEDLIK 636
Query: 146 SIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCE 190
SIRDRFV G+WSKAA + Q +E+D D+ V GD+EDLET E
Sbjct: 637 SIRDRFVTGNWSKAALRGQ---EINENDVDDEEVDGDFEDLETGE 678
>gi|328786694|ref|XP_397483.4| PREDICTED: hypothetical protein LOC414048 [Apis mellifera]
Length = 1219
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 125 ENDDDEFFKPKVKGN--KEEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGD 182
+N ++ F P+ + + EE + +RFV G W ++ ++ K DD +D+ +YGD
Sbjct: 685 QNQEEYIFFPETRRDWLSEENKVLVMNRFVTGKWKESEDAEELLKL---DDINDEELYGD 741
Query: 183 YEDLETCEKHEGQCEDNS 200
+EDLET EKHE + S
Sbjct: 742 FEDLETGEKHETKITKES 759
>gi|218192763|gb|EEC75190.1| hypothetical protein OsI_11428 [Oryza sativa Indica Group]
Length = 1130
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 82/165 (49%), Gaps = 31/165 (18%)
Query: 52 DSGDQKDSYEEGEDDDSDEGADDDNDTVDNQ-----LSSGTEEREDNDDARISFS----- 101
+SGD D EG DDS+E D D++T +N L + T R + ++ +
Sbjct: 519 NSGD--DQLSEGSADDSEESLDSDDETENNSKWKESLLARTLSRRSANLMQLVYGQASKK 576
Query: 102 LYTGNQHQHQKLSKEVHDSSKGEEN---------------DDDEFFKPKVK-GNKEEAYE 145
L GN ++ S E KG++ D +FFK +++ + E+ +
Sbjct: 577 LDEGNDSSAEESSDEEFFVPKGQKKQAKNESTSFDDMDAEDYSKFFKTELRDWSDEDLIK 636
Query: 146 SIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCE 190
SIRDRFV G+WSKAA + Q +E+D D+ V GD+EDLET E
Sbjct: 637 SIRDRFVTGNWSKAALRGQ---EINENDVDDEEVDGDFEDLETGE 678
>gi|397491654|ref|XP_003816764.1| PREDICTED: LOW QUALITY PROTEIN: ribosome biogenesis protein BMS1
homolog [Pan paniscus]
Length = 1280
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 23/76 (30%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDA--------VYGDYEDLETCEKH 192
EE SIRD FV G W +DD D A +YGD+EDLET + H
Sbjct: 748 EEVMNSIRDCFVTGKW---------------EDDKDAAKVLAEDEELYGDFEDLETGDVH 792
Query: 193 EGQCEDNSGSEGIENE 208
+G+ N+ +E IE E
Sbjct: 793 KGKSGPNTQNEDIEKE 808
>gi|40788900|dbj|BAA11504.2| KIAA0187 [Homo sapiens]
Length = 1285
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 23/76 (30%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDA--------VYGDYEDLETCEKH 192
EE SIRD FV G W +DD D A +YGD+EDLET + H
Sbjct: 751 EEVMNSIRDCFVTGKW---------------EDDKDAAKVLAEDEELYGDFEDLETGDVH 795
Query: 193 EGQCEDNSGSEGIENE 208
+G+ N+ +E IE E
Sbjct: 796 KGKSGPNTQNEDIEKE 811
>gi|119606978|gb|EAW86572.1| BMS1-like, ribosome assembly protein (yeast), isoform CRA_b [Homo
sapiens]
Length = 886
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNS 200
EE SIRD FV G W +K +ED++ +YGD+EDLET + H+G+ N+
Sbjct: 748 EEVMNSIRDCFVTGKWE---DDKDAAKVLAEDEE----LYGDFEDLETGDVHKGKSGPNT 800
Query: 201 GSEGIENE 208
+E IE E
Sbjct: 801 QNEDIEKE 808
>gi|197101473|ref|NP_001127670.1| ribosome biogenesis protein BMS1 homolog [Pongo abelii]
gi|55733603|emb|CAH93478.1| hypothetical protein [Pongo abelii]
Length = 1283
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 23/76 (30%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDA--------VYGDYEDLETCEKH 192
EE SIRD FV G W +DD D A +YGD+EDLET + H
Sbjct: 749 EEVMNSIRDCFVTGKW---------------EDDKDAAKVLAEDEELYGDFEDLETGDVH 793
Query: 193 EGQCEDNSGSEGIENE 208
+G+ N+ +E IE E
Sbjct: 794 KGKSGPNTQNEDIEKE 809
>gi|27696627|gb|AAH43345.1| BMS1 homolog, ribosome assembly protein (yeast) [Homo sapiens]
Length = 1282
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 23/76 (30%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDA--------VYGDYEDLETCEKH 192
EE SIRD FV G W +DD D A +YGD+EDLET + H
Sbjct: 748 EEVMNSIRDCFVTGKW---------------EDDKDAAKVLAEDEELYGDFEDLETGDVH 792
Query: 193 EGQCEDNSGSEGIENE 208
+G+ N+ +E IE E
Sbjct: 793 KGKSGPNTQNEDIEKE 808
>gi|224589071|ref|NP_055568.3| ribosome biogenesis protein BMS1 homolog [Homo sapiens]
gi|27151474|sp|Q14692.1|BMS1_HUMAN RecName: Full=Ribosome biogenesis protein BMS1 homolog; AltName:
Full=Ribosome assembly protein BMS1 homolog
gi|119606977|gb|EAW86571.1| BMS1-like, ribosome assembly protein (yeast), isoform CRA_a [Homo
sapiens]
gi|152013040|gb|AAI50253.1| BMS1 homolog, ribosome assembly protein (yeast) [Homo sapiens]
gi|168278541|dbj|BAG11150.1| ribosome biogenesis protein BMS1 homolog [synthetic construct]
Length = 1282
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 23/76 (30%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDA--------VYGDYEDLETCEKH 192
EE SIRD FV G W +DD D A +YGD+EDLET + H
Sbjct: 748 EEVMNSIRDCFVTGKW---------------EDDKDAAKVLAEDEELYGDFEDLETGDVH 792
Query: 193 EGQCEDNSGSEGIENE 208
+G+ N+ +E IE E
Sbjct: 793 KGKSGPNTQNEDIEKE 808
>gi|145352670|ref|XP_001420661.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580896|gb|ABO98954.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1148
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 132 FKPKVKGNKEEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEK 191
F P+V+ + ++R+RFV GDW A +++ +D +D V+GD+EDLET EK
Sbjct: 599 FLPEVRSGLDLDDPALRNRFVTGDWDAAKARSEAQPRDENEDGDEDEVFGDFEDLETGEK 658
>gi|354484279|ref|XP_003504317.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cricetulus
griseus]
gi|344252222|gb|EGW08326.1| Ribosome biogenesis protein BMS1-like [Cricetulus griseus]
Length = 1276
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 16/100 (16%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNS 200
EE SIRD FV G W +K +ED++ +YGD+EDLET + H+G+ + ++
Sbjct: 742 EEVMNSIRDCFVTGKWE---DDKDAAKVLAEDEE----LYGDFEDLETGDVHKGKPDPDT 794
Query: 201 GSEGIE---------NEDESAVEEWRLKKLTLRAKFDAQY 231
E E E+ESA + KK L+ FDA+Y
Sbjct: 795 QIEDTEEDIKEETDPTEEESAKTKHLNKKRKLKELFDAEY 834
>gi|119606979|gb|EAW86573.1| BMS1-like, ribosome assembly protein (yeast), isoform CRA_c [Homo
sapiens]
Length = 1067
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNS 200
EE SIRD FV G W +K +ED++ +YGD+EDLET + H+G+ N+
Sbjct: 748 EEVMNSIRDCFVTGKWE---DDKDAAKVLAEDEE----LYGDFEDLETGDVHKGKSGPNT 800
Query: 201 GSEGIENE 208
+E IE E
Sbjct: 801 QNEDIEKE 808
>gi|426364541|ref|XP_004049361.1| PREDICTED: LOW QUALITY PROTEIN: ribosome biogenesis protein BMS1
homolog [Gorilla gorilla gorilla]
Length = 1145
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNS 200
EE SIRD FV G W +K +ED++ +YGD+EDLET + H+G+ N+
Sbjct: 760 EEVMNSIRDCFVTGKWE---DDKDATKVLAEDEE----LYGDFEDLETGDVHKGKSGPNT 812
Query: 201 GSEGIENE 208
+E IE E
Sbjct: 813 QNEDIEKE 820
>gi|350423434|ref|XP_003493481.1| PREDICTED: hypothetical protein LOC100743997 [Bombus impatiens]
Length = 1260
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 125 ENDDDEFFKPKVKGNK--EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGD 182
+N ++ F P+ + N EE + +RFV G W ++ ++ K DD +D+ +YGD
Sbjct: 727 QNQEECIFFPETQRNWLDEENKILVVNRFVTGKWKESEDAEELLK---LDDVNDEELYGD 783
Query: 183 YEDLETCEKHEGQ 195
+ED+ET EKHE +
Sbjct: 784 FEDMETGEKHEAE 796
>gi|383863223|ref|XP_003707081.1| PREDICTED: uncharacterized protein LOC100876332 [Megachile
rotundata]
Length = 1238
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 147 IRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
+ +RFV G W + ++ K DD D+ +YGD+EDLET EKHEG+
Sbjct: 728 VTNRFVTGKWKDSEDAEELLK---LDDMDDEELYGDFEDLETNEKHEGE 773
>gi|351704261|gb|EHB07180.1| Ribosome biogenesis protein BMS1-like protein [Heterocephalus
glaber]
Length = 1206
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNS 200
EE SIRD FV G+W + K ++ DD ++GD+EDLET + H+G+ + ++
Sbjct: 674 EEVMNSIRDCFVTGEWEE-------DKDAAKILAKDDELFGDFEDLETGDVHKGKPDPDA 726
Query: 201 GSEGIENE 208
++ +E E
Sbjct: 727 QTKDVEGE 734
>gi|193598807|ref|XP_001951128.1| PREDICTED: hypothetical protein LOC100169539 [Acyrthosiphon pisum]
Length = 1225
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 142 EAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNSG 201
E SI+D FV G WS+ ++ + EDD+ + +YGD+EDLET EK EGQ D+
Sbjct: 710 EVCGSIKDMFVTGKWSR----DEDATALLEDDNEE--LYGDFEDLETGEKVEGQDFDSDN 763
Query: 202 SEGIENEDESAVE 214
+E ++ E
Sbjct: 764 DSVVEKPNKPLTE 776
>gi|183986036|gb|AAI66492.1| Bms1 protein [Rattus norvegicus]
Length = 894
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 18/102 (17%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNS 200
EE SIRD FV G W +K +ED++ +YGD+EDLET + H+G+ ++
Sbjct: 360 EEVMNSIRDCFVTGKWE---DDKDAAKLLAEDEE----LYGDFEDLETGDVHKGKPGLDT 412
Query: 201 GSEGI-----------ENEDESAVEEWRLKKLTLRAKFDAQY 231
SE I E+ESA E+ KK L+ FDA+Y
Sbjct: 413 QSEDIEEEEEVKEETGPAEEESAREKHLNKKRKLKELFDAEY 454
>gi|242012353|ref|XP_002426897.1| ribosome biogenesis protein bms1, putative [Pediculus humanus
corporis]
gi|212511126|gb|EEB14159.1| ribosome biogenesis protein bms1, putative [Pediculus humanus
corporis]
Length = 1217
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 147 IRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHE 193
I+D FV G W K+ ++ K DD S D +GD+EDLET EKHE
Sbjct: 713 IKDCFVTGKWKKSEDAEELLK---LDDLSSDDAFGDFEDLETGEKHE 756
>gi|195328300|ref|XP_002030854.1| GM25680 [Drosophila sechellia]
gi|194119797|gb|EDW41840.1| GM25680 [Drosophila sechellia]
Length = 1116
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 15/85 (17%)
Query: 145 ESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDA---VYGDYEDLETCEKHEGQCEDN-- 199
E I++ FV G W + + K DD DA VYGD+EDLET E+H G+ +
Sbjct: 565 ELIKNCFVTGKWKASEDAENLLKM----DDMSDAESEVYGDFEDLETGEQHSGKPKAGDG 620
Query: 200 --SGSEGIENEDESAVEEWRLKKLT 222
SG E + ED SA + +KLT
Sbjct: 621 GESGEENSKPEDSSAAK----RKLT 641
>gi|21410151|gb|AAH30906.1| Bms1 protein [Mus musculus]
Length = 938
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 52/109 (47%), Gaps = 33/109 (30%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDA--------VYGDYEDLETCEKH 192
EE SIRD FV G W +DD D A +YGD+EDLET + H
Sbjct: 405 EEVMNSIRDCFVTGKW---------------EDDKDAAKILAEEEELYGDFEDLETGDVH 449
Query: 193 EGQCEDNSGSEGI----------ENEDESAVEEWRLKKLTLRAKFDAQY 231
+G+ ++ SE I +E+ESA ++ KK L+ FDA+Y
Sbjct: 450 KGKPGPDTQSEDIEEEEVKEETDPSEEESARKKHLDKKRKLKELFDAEY 498
>gi|281599335|ref|NP_001094221.1| BMS1 homolog, ribosome assembly protein [Rattus norvegicus]
Length = 1282
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 51/110 (46%), Gaps = 34/110 (30%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDA--------VYGDYEDLETCEKH 192
EE SIRD FV G W +DD D A +YGD+EDLET + H
Sbjct: 748 EEVMNSIRDCFVTGKW---------------EDDKDAAKLLAEDEELYGDFEDLETGDVH 792
Query: 193 EGQCEDNSGSEGI-----------ENEDESAVEEWRLKKLTLRAKFDAQY 231
+G+ ++ SE I E+ESA E+ KK L+ FDA+Y
Sbjct: 793 KGKPGLDTQSEDIEEEEEVKEETGPAEEESAREKHLNKKRKLKELFDAEY 842
>gi|47210231|emb|CAF95218.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1017
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNS 200
EE SIRD FV G W + K D+ +YGD+EDLET E H+G +
Sbjct: 489 EEMMNSIRDCFVTGKWDATQDAATLLK-------QDEELYGDFEDLETGEVHKGGDTEQD 541
Query: 201 GSEGIE 206
+E IE
Sbjct: 542 PAENIE 547
>gi|149049623|gb|EDM02077.1| BMS1-like, ribosome assembly protein (yeast) [Rattus norvegicus]
Length = 1052
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 18/102 (17%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNS 200
EE SIRD FV G W +K +ED++ +YGD+EDLET + H+G+ ++
Sbjct: 748 EEVMNSIRDCFVTGKWE---DDKDAAKLLAEDEE----LYGDFEDLETGDVHKGKPGLDT 800
Query: 201 GSEGI-----------ENEDESAVEEWRLKKLTLRAKFDAQY 231
SE I E+ESA E+ KK L+ FDA+Y
Sbjct: 801 QSEDIEEEEEVKEETGPAEEESAREKHLNKKRKLKELFDAEY 842
>gi|194872192|ref|XP_001972980.1| GG13598 [Drosophila erecta]
gi|190654763|gb|EDV52006.1| GG13598 [Drosophila erecta]
Length = 1160
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 15/85 (17%)
Query: 145 ESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDA---VYGDYEDLETCEKHEGQCEDNSG 201
E I++ FV G W + + K DD DA VYGD+EDLET E+H G+ G
Sbjct: 609 ELIKNCFVTGKWKASEDAENLLKM----DDMSDAESEVYGDFEDLETGEQHSGKPNTEVG 664
Query: 202 SEG----IENEDESAVEEWRLKKLT 222
E +++E+ SA + +KLT
Sbjct: 665 GESDEETLKSEEPSAAK----RKLT 685
>gi|37359828|dbj|BAC97892.1| mKIAA0187 protein [Mus musculus]
Length = 1287
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 52/109 (47%), Gaps = 33/109 (30%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDA--------VYGDYEDLETCEKH 192
EE SIRD FV G W +DD D A +YGD+EDLET + H
Sbjct: 754 EEVMNSIRDCFVTGKW---------------EDDKDAAKILAEEEELYGDFEDLETGDVH 798
Query: 193 EGQCEDNSGSEGI----------ENEDESAVEEWRLKKLTLRAKFDAQY 231
+G+ ++ SE I +E+ESA ++ KK L+ FDA+Y
Sbjct: 799 KGKPGPDTQSEDIEEEEVKEETDPSEEESARKKHLDKKRKLKELFDAEY 847
>gi|39930555|ref|NP_919320.1| ribosome biogenesis protein BMS1 homolog [Mus musculus]
gi|34785265|gb|AAH57054.1| BMS1 homolog, ribosome assembly protein (yeast) [Mus musculus]
gi|148667179|gb|EDK99595.1| BMS1-like, ribosome assembly protein (yeast) [Mus musculus]
Length = 1284
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 52/109 (47%), Gaps = 33/109 (30%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDA--------VYGDYEDLETCEKH 192
EE SIRD FV G W +DD D A +YGD+EDLET + H
Sbjct: 751 EEVMNSIRDCFVTGKW---------------EDDKDAAKILAEEEELYGDFEDLETGDVH 795
Query: 193 EGQCEDNSGSEGI----------ENEDESAVEEWRLKKLTLRAKFDAQY 231
+G+ ++ SE I +E+ESA ++ KK L+ FDA+Y
Sbjct: 796 KGKPGPDTQSEDIEEEEVKEETDPSEEESARKKHLDKKRKLKELFDAEY 844
>gi|303271067|ref|XP_003054895.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462869|gb|EEH60147.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1131
Score = 40.0 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 119 DSSKGEENDDDEFFKPKVKGNKEEAYESIRDRFVMGDWSKAAQKNQVS-----KGKSEDD 173
D K ++ D F +V+ + S+R+RFV GDW+ AA+++
Sbjct: 591 DGKKKQDAFDRSKFLGEVRDELDLEDPSLRNRFVTGDWNAAAERSAAEPGEEGDDDDGGG 650
Query: 174 DSDDAVYGDYEDLETCEK 191
D+ VYGD+ED+ET EK
Sbjct: 651 GDDEDVYGDFEDVETGEK 668
>gi|148228559|ref|NP_001082528.1| otogelin precursor [Xenopus laevis]
gi|49903364|gb|AAH76719.1| LOC398539 protein [Xenopus laevis]
Length = 2414
Score = 40.0 bits (92), Expect = 0.77, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 96/220 (43%), Gaps = 16/220 (7%)
Query: 2 EDSKSSDEDADIKKGEILKSV--SDSDEDNFVEYVEFNEVQHRRRAIFGYGVDSGDQKDS 59
+DS +D++ KG+ + +V DS E+N + +E + + G D DS
Sbjct: 129 DDSSKEHKDSNKGKGQKINNVLSKDSSEENASKEKWSHEKNDKMKTNERKG---KDHNDS 185
Query: 60 YEEGEDDDSDEGADDDN----DTVDNQLSSGTEEREDNDDARISFSLYTGNQHQHQKLSK 115
+E ++ + ++ ++ N D+ + S+ E+++ + + ++ + GN H H
Sbjct: 186 SKESKEKNHEKRQNNKNGWLKDSSEENDSASKEKKDHDKNNKVRTNQNKGNDHDHSSKES 245
Query: 116 EVHDSSKGEENDDDEFFKPKVKGNKEEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDS 175
+ + KGE++ K G+ EE +S +++ K K+ +KG DD S
Sbjct: 246 KENSHEKGEKSK-----KRWQNGSAEEKDDSSKEKKDHEKNDKVKPKH--NKGNGHDDSS 298
Query: 176 DDAVYGDYEDLETCEKHEGQCEDNSGSEGIENEDESAVEE 215
++ +E E + + +G + + + +EE
Sbjct: 299 KESKENSHEKREKNKNRWQKGSAEEKDDGSKEKKDKTLEE 338
>gi|60552298|gb|AAH91626.1| Unknown (protein for IMAGE:7198352), partial [Xenopus laevis]
Length = 1228
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 52/109 (47%), Gaps = 33/109 (30%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDA--------VYGDYEDLETCEKH 192
EE SIRD FV G W +DD D A +YGD+EDLET + H
Sbjct: 751 EEVMNSIRDCFVTGKW---------------EDDKDAAKILAEEEELYGDFEDLETGDVH 795
Query: 193 EGQCEDNSGSEGI----------ENEDESAVEEWRLKKLTLRAKFDAQY 231
+G+ ++ SE I +E+ESA ++ KK L+ FDA+Y
Sbjct: 796 KGKPGPDTQSEDIEEEEVKEETDPSEEESARKKHLDKKRKLKELFDAEY 844
>gi|307173636|gb|EFN64487.1| Ribosome biogenesis protein BMS1-like protein [Camponotus
floridanus]
Length = 1184
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 140 KEEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
KEE I +RFV G W ++ ++ K D+A+YGD+EDLET EKH+ +
Sbjct: 668 KEENKALIINRFVTGKWKESEDAEELLKL------DDEALYGDFEDLETGEKHKAE 717
>gi|156380951|ref|XP_001632030.1| predicted protein [Nematostella vectensis]
gi|156219080|gb|EDO39967.1| predicted protein [Nematostella vectensis]
Length = 1038
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNS 200
EE SIRD FV G W + ++ +D SD+ ++GD+EDLET E H+G E+++
Sbjct: 510 EELGASIRDCFVTGKWKEEEDAERLLS--LDDQLSDEEMFGDFEDLETGEVHQG--EEDT 565
Query: 201 GSE 203
G E
Sbjct: 566 GLE 568
>gi|74221473|dbj|BAE21470.1| unnamed protein product [Mus musculus]
Length = 1223
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 52/109 (47%), Gaps = 33/109 (30%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDA--------VYGDYEDLETCEKH 192
EE SIRD FV G W +DD D A +YGD+EDLET + H
Sbjct: 751 EEVMNSIRDCFVTGKW---------------EDDKDAAKILAEEEELYGDFEDLETGDVH 795
Query: 193 EGQCEDNSGSEGI----------ENEDESAVEEWRLKKLTLRAKFDAQY 231
+G+ ++ SE I +E+ESA ++ KK L+ FDA+Y
Sbjct: 796 KGKPGPDTQSEDIEEEEVKEETDPSEEESARKKHLDKKRKLKELFDAEY 844
>gi|348533229|ref|XP_003454108.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Oreochromis
niloticus]
Length = 1245
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 132 FKPKVKGN--KEEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETC 189
F P + N EE SIRD FV G W + + K D+ +YGD+EDLET
Sbjct: 689 FNPDISHNWDLEEMLNSIRDCFVTGQWEEGQDAATLLK-------EDEELYGDFEDLETG 741
Query: 190 EKHEG 194
+ H+G
Sbjct: 742 KVHKG 746
>gi|158294912|ref|XP_315898.4| AGAP005871-PA [Anopheles gambiae str. PEST]
gi|157015785|gb|EAA11627.4| AGAP005871-PA [Anopheles gambiae str. PEST]
Length = 1191
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 147 IRDRFVMGDWSKAAQKNQVSKGKSEDD--DSDDAVYGDYEDLETCEKHEGQCEDNSGSEG 204
IR+ FV G W + ++ K DD D D VYGD+EDLET EKHE N G
Sbjct: 628 IRNCFVTGKWKASEDAEELLK---LDDMSDGDSDVYGDFEDLETGEKHEAPKGANKKPAG 684
Query: 205 IENEDES 211
+ E+++
Sbjct: 685 GKGEEKA 691
>gi|348560706|ref|XP_003466154.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cavia
porcellus]
Length = 1277
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
EE SIRD FV G W + +K +EDD+ +YGD+EDLET + H+G+
Sbjct: 745 EEVMNSIRDCFVTGKWE---EDKDAAKILAEDDE----LYGDFEDLETGDVHKGK 792
>gi|195590982|ref|XP_002085223.1| GD14685 [Drosophila simulans]
gi|194197232|gb|EDX10808.1| GD14685 [Drosophila simulans]
Length = 1161
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 145 ESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDA---VYGDYEDLETCEKHEGQCEDNSG 201
E I++ FV G W + + K DD DA VYGD+EDLET E+H G+ + G
Sbjct: 610 ELIKNCFVTGKWKASEDAENLLKM----DDMSDAESEVYGDFEDLETGEQHSGKPKAGDG 665
Query: 202 SE 203
E
Sbjct: 666 GE 667
>gi|291412557|ref|XP_002722545.1| PREDICTED: BMS1-like, ribosome assembly protein [Oryctolagus
cuniculus]
Length = 1275
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNS 200
EE SIRD FV G W + +K +ED++ +YGD+EDLET + H+G+ ++
Sbjct: 744 EEVMNSIRDCFVTGKWE---EDKDAAKILAEDEE----LYGDFEDLETGDVHKGKSGPDT 796
Query: 201 GSEGIENEDE 210
E + E E
Sbjct: 797 QIEDVAEEKE 806
>gi|410975653|ref|XP_003994245.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Felis catus]
Length = 1284
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 51/107 (47%), Gaps = 31/107 (28%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDA--------VYGDYEDLETCEKH 192
EE SIRD FV G W +DD D A +YGD+EDLET + H
Sbjct: 751 EEVMNSIRDCFVTGKW---------------EDDKDAAKILAEDEELYGDFEDLETGDVH 795
Query: 193 EGQCEDNSGSEGIE--------NEDESAVEEWRLKKLTLRAKFDAQY 231
+G+ ++ E +E N +ESA ++ KK L+ FDA+Y
Sbjct: 796 KGKPGPDTQIEDVEEVKEEIDPNAEESAKKKHLDKKRKLKEMFDAEY 842
>gi|195494935|ref|XP_002095052.1| GE19894 [Drosophila yakuba]
gi|194181153|gb|EDW94764.1| GE19894 [Drosophila yakuba]
Length = 1159
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 145 ESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDA---VYGDYEDLETCEKHEGQCEDNSG 201
E I++ FV G W + + K DD DA VYGD+EDLET E+H G+ + G
Sbjct: 609 ELIKNCFVTGKWKASEDAENLLKM----DDMSDAESEVYGDFEDLETGEQHSGKPKTEDG 664
Query: 202 SE 203
E
Sbjct: 665 EE 666
>gi|312377687|gb|EFR24457.1| hypothetical protein AND_10935 [Anopheles darlingi]
Length = 1178
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEG--QCED 198
EE E I++ FV G W KA++ + + D D VYGD+EDLET EKH+ +
Sbjct: 612 EENKELIKNCFVTGKW-KASEDAEELLQLDDMSDGDSEVYGDFEDLETGEKHQAAKSAKG 670
Query: 199 NSGSEGIENEDESAVE 214
+G E E E+ E
Sbjct: 671 TPAKDGKEKEGETPKE 686
>gi|21355337|ref|NP_648945.1| CG7728 [Drosophila melanogaster]
gi|7294027|gb|AAF49383.1| CG7728 [Drosophila melanogaster]
gi|16769552|gb|AAL28995.1| LD38375p [Drosophila melanogaster]
gi|220947318|gb|ACL86202.1| CG7728-PA [synthetic construct]
Length = 1159
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 145 ESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDA---VYGDYEDLETCEKHEGQCEDNSG 201
E I++ FV G W + + K DD DA VYGD+EDLET E+H G+ + G
Sbjct: 608 ELIKNCFVTGKWKASEDAENLLKM----DDMSDAESEVYGDFEDLETGEQHSGKPKAEDG 663
Query: 202 SE 203
E
Sbjct: 664 GE 665
>gi|195021668|ref|XP_001985437.1| GH14499 [Drosophila grimshawi]
gi|193898919|gb|EDV97785.1| GH14499 [Drosophila grimshawi]
Length = 1169
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 145 ESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
E I++ FV G W KA++ + + D+D VYGD+EDLET E+H G+
Sbjct: 615 ELIKNCFVTGKW-KASEDAENLLKLDDMSDADSEVYGDFEDLETGEQHSGK 664
>gi|195127127|ref|XP_002008020.1| GI13274 [Drosophila mojavensis]
gi|193919629|gb|EDW18496.1| GI13274 [Drosophila mojavensis]
Length = 1155
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 145 ESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
E I++ FV G W KA++ + + D+D VYGD+EDLET E+H G+
Sbjct: 610 ELIKNCFVTGKW-KASEDAENLLKLDDMSDADSEVYGDFEDLETGEQHSGK 659
>gi|195376929|ref|XP_002047245.1| GJ12043 [Drosophila virilis]
gi|194154403|gb|EDW69587.1| GJ12043 [Drosophila virilis]
Length = 1159
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 145 ESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
E I++ FV G W KA++ + + D+D VYGD+EDLET E+H G+
Sbjct: 608 ELIKNCFVTGKW-KASEDAENLLKLDDMSDADSEVYGDFEDLETGEQHSGK 657
>gi|332244090|ref|XP_003271205.1| PREDICTED: LOW QUALITY PROTEIN: ribosome biogenesis protein BMS1
homolog [Nomascus leucogenys]
Length = 1282
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 23/76 (30%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDA--------VYGDYEDLETCEKH 192
E+ SIRD FV G W +DD D A +YGD+EDLET + H
Sbjct: 748 EDVMNSIRDCFVTGKW---------------EDDKDAAKVLAEDEELYGDFEDLETGDVH 792
Query: 193 EGQCEDNSGSEGIENE 208
+G+ ++ +E IE E
Sbjct: 793 KGKSGPDTQNEDIEKE 808
>gi|395847991|ref|XP_003796647.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Otolemur
garnettii]
Length = 1287
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
EE SIRD FV G W +K +EDD+ +YGD+EDLET + H+G+
Sbjct: 753 EEVMNSIRDCFVTGKWE---DDKDAAKILAEDDE----LYGDFEDLETGDVHKGK 800
>gi|196004598|ref|XP_002112166.1| hypothetical protein TRIADDRAFT_24314 [Trichoplax adhaerens]
gi|190586065|gb|EDV26133.1| hypothetical protein TRIADDRAFT_24314 [Trichoplax adhaerens]
Length = 987
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 18/74 (24%)
Query: 139 NKEEAYESIRDRFVMGDWSKA-AQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCE 197
N E+ ESIRD FV GDW + AQK D DD +YGD+EDL+T E
Sbjct: 494 NDEQYRESIRDCFVSGDWHEEDAQKM---------IDQDDELYGDFEDLDT--------E 536
Query: 198 DNSGSEGIENEDES 211
+ S ++ E+ DE+
Sbjct: 537 NVSATKTAESSDEA 550
>gi|110667057|ref|YP_656868.1| halomucin [Haloquadratum walsbyi DSM 16790]
gi|118573792|sp|Q18DN4.1|HMU_HALWD RecName: Full=Halomucin; Flags: Precursor
gi|109624804|emb|CAJ51211.1| halomucin [Haloquadratum walsbyi DSM 16790]
Length = 9159
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 66/158 (41%), Gaps = 11/158 (6%)
Query: 52 DSGDQKDSYEEGEDDDSDEGADDDNDTVDNQLSSGTEEREDNDDARISFSLYTGNQHQHQ 111
DSGD + + G+D S +DD D NQ SG + NDD S + +G+ Q
Sbjct: 8387 DSGDDSSNQDSGDDSSSQ---NDDGDNSSNQ-DSGDDSSSQNDDGDNSSNQDSGDDSSSQ 8442
Query: 112 K------LSKEVHDSSKGEENDDDEFFKPKVKGNKEEAYESIRDRFVMG-DWSKAAQKNQ 164
+++ D S + +D D+ G+ +S D D ++ ++
Sbjct: 8443 NDDGDNSSNQDSGDDSSSQNDDGDDSSSQNDDGDNSSNQDSGDDSSSQNDDGDNSSNQDS 8502
Query: 165 VSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNSGS 202
S++DD D++ D D + + +G + NS +
Sbjct: 8503 GDDSSSQNDDGDNSSNQDSGDDSSSQNDDGDNKPNSAA 8540
>gi|431914597|gb|ELK15785.1| Ribosome biogenesis protein BMS1 like protein [Pteropus alecto]
Length = 1236
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
EE SIRD FV G W + +K +ED++ +YGD+EDLET H+G+
Sbjct: 745 EEVMNSIRDCFVTGKWE---EDKDAAKILAEDEE----LYGDFEDLETGNMHKGK 792
>gi|270012201|gb|EFA08649.1| hypothetical protein TcasGA2_TC006313 [Tribolium castaneum]
Length = 1134
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSD---DAVYGDYEDLETCEKHEGQCE 197
EE +I + FV G W + +++ K +D SD ++GD+EDLET EKH +
Sbjct: 610 EENKTTIVNCFVTGKWKSSEDASELLKLDDAEDLSDMDDSEMFGDFEDLETGEKHTKRKR 669
Query: 198 DNSGSEGIENEDESAVEEWRLKKLTLRAKFDAQY 231
D E E D A+ E KK L+ KFD +Y
Sbjct: 670 DE--VEKDEEADRQALAE---KKRKLKEKFDEEY 698
>gi|355672808|gb|AER95115.1| BMS1-like protein, ribosome assembly protein [Mustela putorius
furo]
Length = 1204
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
EE SIRD FV G W + +K +ED++ +YGD+EDLET + H+G+
Sbjct: 699 EEVMNSIRDCFVTGKWE---EDKDAAKILAEDEE----LYGDFEDLETGDVHKGK 746
>gi|440896335|gb|ELR48289.1| Ribosome biogenesis protein BMS1-like protein, partial [Bos
grunniens mutus]
Length = 886
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
EE SIRD FV G W + +K +ED++ +YGD+EDLET + H+G+
Sbjct: 352 EEVMNSIRDCFVTGKWE---EDKDAAKILAEDEE----LYGDFEDLETGDVHKGK 399
>gi|426255578|ref|XP_004021425.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Ovis aries]
Length = 1283
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
EE SIRD FV G W + +K +ED++ +YGD+EDLET + H+G+
Sbjct: 749 EEVMNSIRDCFVTGKWE---EDKDAAKILAEDEE----LYGDFEDLETGDVHKGK 796
>gi|281338540|gb|EFB14124.1| hypothetical protein PANDA_005543 [Ailuropoda melanoleuca]
Length = 1276
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
EE SIRD FV G W + +K +ED++ +YGD+EDLET + H+G+
Sbjct: 747 EEVMNSIRDCFVTGKWE---EDKDAAKILAEDEE----LYGDFEDLETGDVHKGK 794
>gi|301763821|ref|XP_002917327.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Ailuropoda
melanoleuca]
Length = 1278
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
EE SIRD FV G W + +K +ED++ +YGD+EDLET + H+G+
Sbjct: 745 EEVMNSIRDCFVTGKWE---EDKDAAKILAEDEE----LYGDFEDLETGDVHKGK 792
>gi|194042650|ref|XP_001928816.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Sus scrofa]
Length = 1282
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
EE SIRD FV G W + +K +ED++ +YGD+EDLET + H+G+
Sbjct: 748 EEVMNSIRDCFVTGKWE---EDKDAAKILAEDEE----LYGDFEDLETGDVHKGK 795
>gi|329663769|ref|NP_001193076.1| ribosome biogenesis protein BMS1 homolog [Bos taurus]
gi|296472215|tpg|DAA14330.1| TPA: CG7728-like [Bos taurus]
Length = 1284
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
EE SIRD FV G W + +K +ED++ +YGD+EDLET + H+G+
Sbjct: 750 EEVMNSIRDCFVTGKWE---EDKDAAKILAEDEE----LYGDFEDLETGDVHKGK 797
>gi|432925926|ref|XP_004080782.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Oryzias
latipes]
Length = 1187
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNS 200
EE ++IRD FV G W + K D+ +YGD+EDLET E H+ Q
Sbjct: 661 EEMLDTIRDCFVTGKWDDGQDAATLLK-------QDEELYGDFEDLETGEVHKSQSGQED 713
Query: 201 GSEGIENEDESAVEE-WRL-KKLTLRAKFDAQY 231
+E +E V+ RL KK L+ +FDA+Y
Sbjct: 714 VAEEEVKVEEEVVQRNKRLEKKRRLKERFDAEY 746
>gi|327278786|ref|XP_003224141.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Anolis
carolinensis]
Length = 1292
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Query: 142 EAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
E SIRD FV G+W + K ++ D+ +YGD+EDLET H+G+
Sbjct: 755 EVMNSIRDCFVTGNW-------EADKDAAKLLKEDEELYGDFEDLETGTIHKGK 801
>gi|195170727|ref|XP_002026163.1| GL16191 [Drosophila persimilis]
gi|194111043|gb|EDW33086.1| GL16191 [Drosophila persimilis]
Length = 1164
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 147 IRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
I++ FV G W KA++ + + D+D VYGD+EDLET E+H G+
Sbjct: 612 IKNCFVTGKW-KASEDAENLLKMDDMSDADSEVYGDFEDLETGEQHSGK 659
>gi|157868455|ref|XP_001682780.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68126236|emb|CAJ03601.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 4825
Score = 37.7 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 32/182 (17%)
Query: 61 EEGEDDDSDEGADDDNDTV-DNQLSSGTEEREDNDDARISFSLYTGNQHQHQKLSKE--- 116
+ G+ DD +E A D + V ++ L+ G E REDN++ + + S E
Sbjct: 4069 DAGDADDMNEDAGDAAEEVPEDNLAEGDEHREDNEETGGFDDKADEIRDADEDRSCEHDM 4128
Query: 117 VHDSSKGEENDDDEFFKPKVK---GNKEEAYESIRDRFVMGDWSKAAQKNQV-SKGKSED 172
V D K E ++D V+ + EE ES+RD + D + +++ V S+G+ +
Sbjct: 4129 VGDDDKSEMDEDGSSGGDSVEHSDTDGEERDESVRDDKLPSDADEEPEESDVASEGRVDS 4188
Query: 173 DDSDDA-----------------VYGDYEDLETCEK-------HEGQCEDNSGSEGIENE 208
D + DA GD D+E GQ +D G E EN+
Sbjct: 4189 DAATDAERSELGEEEVEQQDNSESAGDVSDIENASDGPDENVYEGGQQDDREGDEATENQ 4248
Query: 209 DE 210
D+
Sbjct: 4249 DK 4250
>gi|313747527|ref|NP_001186449.1| ribosome biogenesis protein BMS1 homolog [Gallus gallus]
Length = 1300
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 7/55 (12%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
EE SIRD FV G W + K ++ + D+ +YGD+EDLET H+G+
Sbjct: 762 EEVMSSIRDCFVTGKWEE-------DKDAAKLLEEDEELYGDFEDLETGVVHKGR 809
>gi|198462469|ref|XP_001352438.2| GA20548 [Drosophila pseudoobscura pseudoobscura]
gi|198150838|gb|EAL29934.2| GA20548 [Drosophila pseudoobscura pseudoobscura]
Length = 1164
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 147 IRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
I++ FV G W KA++ + + D+D VYGD+EDLET E+H G+
Sbjct: 612 IKNCFVTGKW-KASEDAENLLKMDDMSDADSEVYGDFEDLETGEQHSGK 659
>gi|194206075|ref|XP_001489995.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Equus
caballus]
Length = 1599
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
EE SIRD FV G W + +K +ED++ +YGD+EDLET + H+G+
Sbjct: 745 EEVMNSIRDCFVTGKWE---EDKDAAKILAEDEE----LYGDFEDLETGDVHKGK 792
>gi|189240051|ref|XP_967188.2| PREDICTED: similar to GA20548-PA [Tribolium castaneum]
Length = 1135
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSD---DAVYGDYEDLETCEKHEGQCE 197
EE +I + FV G W + +++ K +D SD ++GD+EDLET EKH +
Sbjct: 611 EENKTTIVNCFVTGKWKSSEDASELLKLDDAEDLSDMDDSEMFGDFEDLETGEKHTKRKR 670
Query: 198 DNSGSEGIENEDESAVEEWRLKKLTLRAKFDAQY 231
D E E D A+ E KK L+ KFD +Y
Sbjct: 671 DE--VEKDEEADRQALAE---KKRKLKEKFDEEY 699
>gi|291229696|ref|XP_002734810.1| PREDICTED: mKIAA0187 protein-like [Saccoglossus kowalevskii]
Length = 1323
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 11/55 (20%)
Query: 142 EAYESIRDRFVMGDWS--KAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEG 194
E I+D FV G W K A+K DD +YGD+EDLET EKH G
Sbjct: 792 EVSTKIKDCFVTGKWENDKDAEKMLAQ---------DDEIYGDFEDLETGEKHHG 837
>gi|198425218|ref|XP_002121876.1| PREDICTED: similar to BMS1-like, ribosome assembly protein [Ciona
intestinalis]
Length = 1122
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 37/73 (50%), Gaps = 19/73 (26%)
Query: 142 EAYESIRDRFVMGDWSKAAQKNQVSKGKSEDD----DSDDAVYGDYEDLETCEKHEGQCE 197
EA ESI D FV G+W G+ ED D DD +YGD+EDLET + +G
Sbjct: 589 EARESIADCFVTGNW-----------GEEEDAKTLLDQDDEIYGDFEDLETGDVVKG--- 634
Query: 198 DNSGSEGIENEDE 210
N +NEDE
Sbjct: 635 -NDAKTTNQNEDE 646
>gi|334313904|ref|XP_003339962.1| PREDICTED: ribosome biogenesis protein BMS1 homolog isoform 2
[Monodelphis domestica]
Length = 1303
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 11/57 (19%)
Query: 141 EEAYESIRDRFVMGDWS--KAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
EE +IRD FV G W K AQK EDD+ +YGD+EDLET + H+G+
Sbjct: 763 EEVMNNIRDCFVTGKWEADKDAQKLL------EDDEE---LYGDFEDLETGDVHKGK 810
>gi|326923220|ref|XP_003207837.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Meleagris
gallopavo]
Length = 1452
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
EE SIRD FV G W + ++ K D+ +YGD+EDLET H+G+
Sbjct: 914 EEVMSSIRDCFVTGKWEEDKDAAKLLK-------EDEELYGDFEDLETGVVHKGR 961
>gi|126272884|ref|XP_001369831.1| PREDICTED: ribosome biogenesis protein BMS1 homolog isoform 1
[Monodelphis domestica]
Length = 1301
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 11/57 (19%)
Query: 141 EEAYESIRDRFVMGDWS--KAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
EE +IRD FV G W K AQK EDD+ +YGD+EDLET + H+G+
Sbjct: 763 EEVMNNIRDCFVTGKWEADKDAQKLL------EDDEE---LYGDFEDLETGDVHKGK 810
>gi|345488166|ref|XP_001605043.2| PREDICTED: hypothetical protein LOC100121428 [Nasonia vitripennis]
Length = 1270
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 147 IRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNSGSEGIE 206
+ +RFV G W K ++ + + D D+ VYGD+EDLET EKH+ + + SE
Sbjct: 743 LVNRFVTGKW-KESEDAEELLKLDDLKDDDEEVYGDFEDLETGEKHKASEKQPTTSEPTP 801
Query: 207 NEDESAV-----EEWRL--KKLTLRAKFDAQY 231
+ E RL KK L+ +FDA Y
Sbjct: 802 KVPKEMTSDELDERKRLLEKKRKLKEQFDADY 833
>gi|307205546|gb|EFN83851.1| Ribosome biogenesis protein BMS1-like protein [Harpegnathos
saltator]
Length = 1268
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 147 IRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQCEDNSGSEGIE 206
+ +RFV G W ++ ++ K +DD ++ +YGD+EDLET +K+E SE +
Sbjct: 751 LMNRFVTGKWKESEDAEELLKLDDMNDDEEE-IYGDFEDLETGQKYEA---IRPASEELL 806
Query: 207 NEDE 210
EDE
Sbjct: 807 AEDE 810
>gi|449269321|gb|EMC80109.1| Ribosome biogenesis protein BMS1 like protein, partial [Columba
livia]
Length = 1312
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 13/58 (22%)
Query: 141 EEAYESIRDRFVMGDW---SKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
EE SIRD FV G W AA+ Q D+ +YGD+EDLET H+G+
Sbjct: 774 EEVMSSIRDCFVTGKWEDDKDAAKLLQ----------EDEELYGDFEDLETGVVHKGK 821
>gi|444519114|gb|ELV12588.1| Ribosome biogenesis protein BMS1 like protein [Tupaia chinensis]
Length = 995
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
EE SIRD FV G W +K +ED++ +YGD+EDLET + H+G+
Sbjct: 690 EEVMNSIRDCFVTGKWE---DDKDAAKILAEDEE----LYGDFEDLETGDVHKGK 737
>gi|403276777|ref|XP_003930062.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Saimiri
boliviensis boliviensis]
Length = 1282
Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 23/63 (36%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDA--------VYGDYEDLETCEKH 192
EE SIRD FV G W +DD D A +YGD+EDLET + H
Sbjct: 748 EEVMNSIRDCFVTGKW---------------EDDKDAAKVLAEDEELYGDFEDLETGDVH 792
Query: 193 EGQ 195
+G+
Sbjct: 793 KGK 795
>gi|380818408|gb|AFE81077.1| ribosome biogenesis protein BMS1 homolog [Macaca mulatta]
gi|380818410|gb|AFE81078.1| ribosome biogenesis protein BMS1 homolog [Macaca mulatta]
gi|380818412|gb|AFE81079.1| ribosome biogenesis protein BMS1 homolog [Macaca mulatta]
gi|380818416|gb|AFE81081.1| ribosome biogenesis protein BMS1 homolog [Macaca mulatta]
Length = 1283
Score = 37.0 bits (84), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
EE SIRD FV G W +K +ED++ +YGD+EDLET + H+G+
Sbjct: 749 EEVMNSIRDCFVTGKWE---DDKDAAKVLAEDEE----LYGDFEDLETGDVHKGK 796
>gi|449504942|ref|XP_002194810.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Taeniopygia
guttata]
Length = 1313
Score = 37.0 bits (84), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQC 196
EE SIRD FV G W K ++ + D+ +YGD+EDLET H+G+
Sbjct: 773 EEVMSSIRDCFVTGKWED-------DKDAAKLLEEDEELYGDFEDLETGVVHKGKA 821
>gi|383423241|gb|AFH34834.1| ribosome biogenesis protein BMS1 homolog [Macaca mulatta]
Length = 1283
Score = 37.0 bits (84), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
EE SIRD FV G W +K +ED++ +YGD+EDLET + H+G+
Sbjct: 749 EEVMNSIRDCFVTGKWE---DDKDAAKVLAEDEE----LYGDFEDLETGDVHKGK 796
>gi|320165503|gb|EFW42402.1| ribosome biogenesis protein BMS1 [Capsaspora owczarzaki ATCC 30864]
Length = 1415
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 145 ESIRDRFVMGDWSK---AAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
E IR+RFV G W + AA + G + D D VYGD+ED+E + + G+
Sbjct: 848 EGIRNRFVTGAWDEDEDAATLLARANGVTPIDQDADEVYGDFEDVEEGKVYHGK 901
>gi|383423237|gb|AFH34832.1| ribosome biogenesis protein BMS1 homolog [Macaca mulatta]
Length = 1159
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
EE SIRD FV G W +K +ED++ +YGD+EDLET + H+G+
Sbjct: 749 EEVMNSIRDCFVTGKWE---DDKDAAKVLAEDEE----LYGDFEDLETGDVHKGK 796
>gi|332021539|gb|EGI61904.1| Ribosome biogenesis protein BMS1-like protein [Acromyrmex
echinatior]
Length = 1239
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 140 KEEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDAVYGDYEDLETCEKHEGQ 195
KEE + +RFV G W ++ ++ K ED +YGD+EDLET EKH+ +
Sbjct: 725 KEENKALLINRFVTGKWKESEDAEELLKLDDED------LYGDFEDLETGEKHKAE 774
>gi|307109440|gb|EFN57678.1| hypothetical protein CHLNCDRAFT_142849 [Chlorella variabilis]
Length = 955
Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQV--SKGKSEDDDSDDAVYGDYEDLETCEKHEGQCED 198
E A E +R+RF GDW + + ++ E+ + VYGD+EDLET E+ G D
Sbjct: 445 EGAAERLRNRFATGDWGEGEVRAAARPAEDGEEEGEEGGEVYGDFEDLETGERFAGS-SD 503
Query: 199 NSGSEGIENEDESAVEEWRLKKLTLRAKFDAQY 231
+ + E+ + +A FDA+Y
Sbjct: 504 PATRAAAAAIRAAGEEDLAEARRAKKAAFDAEY 536
>gi|74141044|dbj|BAE22094.1| unnamed protein product [Mus musculus]
Length = 830
Score = 36.6 bits (83), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 23/63 (36%)
Query: 141 EEAYESIRDRFVMGDWSKAAQKNQVSKGKSEDDDSDDA--------VYGDYEDLETCEKH 192
EE SIRD FV G W +DD D A +YGD+EDLET + H
Sbjct: 751 EEVMNSIRDCFVTGKW---------------EDDKDAAKILAEEEELYGDFEDLETGDVH 795
Query: 193 EGQ 195
+G+
Sbjct: 796 KGK 798
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.304 0.127 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,184,647,946
Number of Sequences: 23463169
Number of extensions: 200253640
Number of successful extensions: 1500403
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2942
Number of HSP's successfully gapped in prelim test: 15740
Number of HSP's that attempted gapping in prelim test: 1075076
Number of HSP's gapped (non-prelim): 143742
length of query: 236
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 98
effective length of database: 9,121,278,045
effective search space: 893885248410
effective search space used: 893885248410
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 74 (33.1 bits)