Query 043057
Match_columns 236
No_of_seqs 122 out of 190
Neff 5.4
Searched_HMMs 13730
Date Mon Mar 25 21:51:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043057.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/043057hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1yu8x1 a.14.1.1 (X:42-76) Vil 6.8 42 0.003 19.2 -0.3 15 79-94 20-34 (35)
2 d1wiga1 g.39.1.3 (A:1-32) Acti 5.6 57 0.0041 18.2 -0.2 10 149-158 12-21 (32)
3 d1a9xa2 c.24.1.1 (A:936-1073) 5.4 83 0.0061 22.6 0.7 19 14-32 6-24 (138)
4 d1unda_ a.14.1.1 (A:) Advillin 4.9 54 0.004 18.8 -0.6 14 79-93 21-34 (36)
5 d2zdra1 b.85.1.1 (A:282-349) C 4.4 1E+02 0.0076 19.1 0.5 10 11-20 16-25 (68)
6 d2rn8a1 b.34.2.1 (A:176-228) B 4.3 1.6E+02 0.012 17.2 1.4 24 7-30 11-34 (53)
7 d1vlia1 b.85.1.1 (A:297-368) S 4.0 1.2E+02 0.0085 19.2 0.5 10 11-20 14-23 (72)
8 d1zs4a1 a.35.1.9 (A:4-81) Regu 3.0 1.2E+02 0.009 20.0 -0.2 16 77-93 35-50 (78)
9 d1yu5x1 a.14.1.1 (X:10-76) Vil 2.7 1.4E+02 0.0098 19.2 -0.3 14 79-93 52-65 (67)
10 d1kjwa1 b.34.2.1 (A:430-525) P 2.6 1.9E+02 0.014 18.7 0.4 20 9-28 21-40 (96)
No 1
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=6.76 E-value=42 Score=19.20 Aligned_cols=15 Identities=7% Similarity=-0.093 Sum_probs=10.0
Q ss_pred hhhhhccchhhhcccc
Q 043057 79 VDNQLSSGTEEREDND 94 (236)
Q Consensus 79 ~~kWKenl~a~ra~~~ 94 (236)
-|+||++- ..+..++
T Consensus 20 LP~WKq~~-lKk~~~L 34 (35)
T d1yu8x1 20 LPLWKQQN-LKKEKGL 34 (35)
T ss_dssp SCHHHHHH-HHHHTTC
T ss_pred CcHhHHHH-HHHHhCC
Confidence 57899887 6655443
No 2
>d1wiga1 g.39.1.3 (A:1-32) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.57 E-value=57 Score=18.17 Aligned_cols=10 Identities=10% Similarity=0.527 Sum_probs=6.9
Q ss_pred hhhccCCcch
Q 043057 149 DRFVMGDWSK 158 (236)
Q Consensus 149 ~rFVTG~w~~ 158 (236)
.+||||....
T Consensus 12 ~~~ItGkVLE 21 (32)
T d1wiga1 12 EKYITGRVLE 21 (32)
T ss_dssp CCCCSSCCBC
T ss_pred hhhhhhhhhh
Confidence 4689987653
No 3
>d1a9xa2 c.24.1.1 (A:936-1073) Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=5.42 E-value=83 Score=22.64 Aligned_cols=19 Identities=37% Similarity=0.623 Sum_probs=16.3
Q ss_pred ccccccccccCCcchhhHH
Q 043057 14 KKGEILKSVSDSDEDNFVE 32 (236)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~ 32 (236)
|+|-||-||++.||..+..
T Consensus 6 ~~G~v~iSv~d~dK~~~~~ 24 (138)
T d1a9xa2 6 KHGRALLSVREGDKERVVD 24 (138)
T ss_dssp SSSEEEEECCGGGGTTHHH
T ss_pred CCCEEEEEEehhhhhHHHH
Confidence 7899999999999887764
No 4
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.89 E-value=54 Score=18.79 Aligned_cols=14 Identities=7% Similarity=0.007 Sum_probs=9.1
Q ss_pred hhhhhccchhhhccc
Q 043057 79 VDNQLSSGTEEREDN 93 (236)
Q Consensus 79 ~~kWKenl~a~ra~~ 93 (236)
-|+||++- ..+..+
T Consensus 21 LP~WKq~~-lKk~~~ 34 (36)
T d1unda_ 21 LPGWKQLQ-MKKEKG 34 (36)
T ss_dssp SCHHHHHH-HHHHHH
T ss_pred CcHHHHHH-HHHHhC
Confidence 47898876 555543
No 5
>d2zdra1 b.85.1.1 (A:282-349) Capsule biosynthesis protein SiaC, C-terminal domain {Neisseria meningitidis [TaxId: 487]}
Probab=4.41 E-value=1e+02 Score=19.11 Aligned_cols=10 Identities=70% Similarity=1.059 Sum_probs=6.3
Q ss_pred cccccccccc
Q 043057 11 ADIKKGEILK 20 (236)
Q Consensus 11 ~~~~~~~~~~ 20 (236)
.+|++|++|.
T Consensus 16 ~~I~kG~~i~ 25 (68)
T d2zdra1 16 KDIKKGELLS 25 (68)
T ss_dssp SCBCTTCBCC
T ss_pred cccCCCCEec
Confidence 3567777664
No 6
>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]}
Probab=4.31 E-value=1.6e+02 Score=17.16 Aligned_cols=24 Identities=8% Similarity=0.108 Sum_probs=17.8
Q ss_pred CCcccccccccccccccCCcchhh
Q 043057 7 SDEDADIKKGEILKSVSDSDEDNF 30 (236)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~ 30 (236)
....-.+++|++|.-+..++..-.
T Consensus 11 ~~~eLs~~~Gd~~~vl~~~~~~Ww 34 (53)
T d2rn8a1 11 DPQELALRCDEEYYLLDSSEIHWW 34 (53)
T ss_dssp STTBCCCCTTCEEEECCCSCSSCE
T ss_pred CCCeeeECCCCEEEEeEEcCCCeE
Confidence 455678999999998877665443
No 7
>d1vlia1 b.85.1.1 (A:297-368) Spore coat polysaccharide biosynthesis protein SpsE, C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=4.01 E-value=1.2e+02 Score=19.23 Aligned_cols=10 Identities=50% Similarity=0.730 Sum_probs=6.3
Q ss_pred cccccccccc
Q 043057 11 ADIKKGEILK 20 (236)
Q Consensus 11 ~~~~~~~~~~ 20 (236)
.+|++|++|.
T Consensus 14 kdi~kG~~it 23 (72)
T d1vlia1 14 APIQKGEAFS 23 (72)
T ss_dssp SCBCTTCBCC
T ss_pred cccCCCCCcc
Confidence 3567777663
No 8
>d1zs4a1 a.35.1.9 (A:4-81) Regulatory protein cII {Bacteriophage lambda [TaxId: 10710]}
Probab=2.98 E-value=1.2e+02 Score=20.03 Aligned_cols=16 Identities=0% Similarity=-0.209 Sum_probs=12.0
Q ss_pred Cchhhhhccchhhhccc
Q 043057 77 DTVDNQLSSGTEEREDN 93 (236)
Q Consensus 77 ~~~~kWKenl~a~ra~~ 93 (236)
..++|||+++ ..+.+.
T Consensus 35 sqiSRwK~~f-~~q~sm 50 (78)
T d1zs4a1 35 SQISRWKRDW-IPKFSM 50 (78)
T ss_dssp HHHHHHHHHT-HHHHHH
T ss_pred HHHHHHHHhh-HHHHHH
Confidence 3688999998 776653
No 9
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=2.66 E-value=1.4e+02 Score=19.25 Aligned_cols=14 Identities=7% Similarity=-0.005 Sum_probs=8.1
Q ss_pred hhhhhccchhhhccc
Q 043057 79 VDNQLSSGTEEREDN 93 (236)
Q Consensus 79 ~~kWKenl~a~ra~~ 93 (236)
-|+||++- ..+..+
T Consensus 52 LP~WKq~~-lKk~~~ 65 (67)
T d1yu5x1 52 LPLWKQQN-LKKEKG 65 (67)
T ss_dssp SCHHHHHH-HHHHTT
T ss_pred CcHHHHHH-HHHHhC
Confidence 45677766 555443
No 10
>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=2.62 E-value=1.9e+02 Score=18.69 Aligned_cols=20 Identities=20% Similarity=0.531 Sum_probs=15.3
Q ss_pred cccccccccccccccCCcch
Q 043057 9 EDADIKKGEILKSVSDSDED 28 (236)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~ 28 (236)
.+-.+++|+||.-+...+.+
T Consensus 21 ~eLsf~kGdil~V~~~~d~~ 40 (96)
T d1kjwa1 21 QALSFRFGDVLHVIDAGDEE 40 (96)
T ss_dssp SBCCBCTTCEEEEEECCSSS
T ss_pred ccceEcCCCEEEEeeeccCc
Confidence 35778999999888766654
Done!