BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043060
(707 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/741 (62%), Positives = 574/741 (77%), Gaps = 34/741 (4%)
Query: 1 MALPPSSLTLSPSI--LHF-PPSSDPPYKLLQNQPSLALLSKCTNMQNIKQVHSQIIKTG 57
M L S LT+ S HF P SSDPPY ++N PSL+LL C +Q+++ +H+Q+IK G
Sbjct: 1 MMLSCSPLTVPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIG 60
Query: 58 LHNTQFALSKLIEICAVSP-FGDLSYALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIK 116
LHNT +ALSKLIE C +SP F L YA+ VF+TI+EPN +IWN + RGH+LSS PV A+K
Sbjct: 61 LHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALK 120
Query: 117 FYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYA 176
YV MI G +PN+YTFPF+LKSCAK A EG+QIH HVLKLG + D +VHTSLI+MY
Sbjct: 121 LYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYV 180
Query: 177 QNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIRE---------- 226
QNG LE A VF+KS RD VSYTALI GYASRGY+++A++LFDE+P+++
Sbjct: 181 QNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISG 240
Query: 227 -------------------ENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSN 267
N P+EST+VTV+SACA GS+ELG V I+ HG GSN
Sbjct: 241 YAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSN 300
Query: 268 LHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQ 327
L + NALID+YSKCG+L A LFE + +DVISWN +IGGYTH + YKEAL+LF++ML+
Sbjct: 301 LKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 360
Query: 328 SNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVS-LWTSLIDMYAKCGNI 386
S PNDVT LS+LPACA+LGA+D+G+WIH YIDK + + N S L TSLIDMYAKCG+I
Sbjct: 361 SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDI 420
Query: 387 KAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSAC 446
+AA QVF+ + +K+L+SWNAMI G AMHG+AD + LFSRM G+QPDDITFVG+LSAC
Sbjct: 421 EAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSAC 480
Query: 447 NHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAI 506
+H+G+LD+GR F M QDYK++PKL+HYGCM+DLLG +GLF EAE ++ MEM+PD I
Sbjct: 481 SHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVI 540
Query: 507 WTSLLGACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLND 566
W SLL AC++HG +ELGES A++L+++EPENPG+YVLLSN+YA AGRW++VA R LND
Sbjct: 541 WCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLND 600
Query: 567 KGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYD 626
KGMKKVPGCSSIE+ SVVHEF++GDK HP+++ IY ML+E++ LLEK+GFVPDTSEVL +
Sbjct: 601 KGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQE 660
Query: 627 MDEEWKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREII 686
M+EEWKEGAL HHSEKLAIA+GLISTKPGT + IVKNLRVC NCH ATKLISKI+ REII
Sbjct: 661 MEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREII 720
Query: 687 ARDRNRFHHFKDGNCSCNDYW 707
ARDR RFHHF+DG CSCNDYW
Sbjct: 721 ARDRTRFHHFRDGVCSCNDYW 741
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 613 bits (1580), Expect = e-174, Method: Compositional matrix adjust.
Identities = 300/731 (41%), Positives = 465/731 (63%), Gaps = 39/731 (5%)
Query: 13 SILHFPPSSDPPYKLLQNQPS--LALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIE 70
S+ P S+P N+ S ++L+ +C +++ +KQ H +I+TG + ++ SKL
Sbjct: 11 SLPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFA 70
Query: 71 ICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMIL-SGFVPN 129
+ A+S F L YA VF+ I +PN WN +IR ++ PV++I ++ M+ S PN
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 130 TYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFN 189
YTFPF++K+ A++S++S G+ +H +K + SD FV SLI+ Y G+L+SA VF
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 190 KSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSL 249
+D VS+ ++I G+ +G D A +LF +M E+ + T+V VLSACA + +L
Sbjct: 191 TIKEKDVVSWNSMINGFVQKGSPDKALELFKKM--ESEDVKASHVTMVGVLSACAKIRNL 248
Query: 250 ELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGY 309
E G VCS IE + + NL + NA++DMY+KCG + A+ LF+++E++D ++W M+ GY
Sbjct: 249 EFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGY 308
Query: 310 THTSDYK-------------------------------EALMLFRQM-LQSNIEPNDVTF 337
+ DY+ EAL++F ++ LQ N++ N +T
Sbjct: 309 AISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITL 368
Query: 338 LSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMG 397
+S L ACA +GAL+LG+WIH+YI K+ ++ N + ++LI MY+KCG+++ + +VF+ +
Sbjct: 369 VSTLSACAQVGALELGRWIHSYIKKHGIRM-NFHVTSALIHMYSKCGDLEKSREVFNSVE 427
Query: 398 YKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQ 457
+ + W+AMI GLAMHG ++A+ +F +M ++P+ +TF V AC+H GL+D
Sbjct: 428 KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAES 487
Query: 458 YFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVH 517
F+ M +Y I P+ +HY C+VD+LGR+G ++A ++ M + P ++W +LLGAC++H
Sbjct: 488 LFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIH 547
Query: 518 GRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSS 577
L L E LLELEP N GA+VLLSN+YA G+W++V+ +R + G+KK PGCSS
Sbjct: 548 ANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSS 607
Query: 578 IEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDM-DEEWKEGAL 636
IE+ ++HEFL GD HP S+ +Y L E+ L+ +G+ P+ S+VL + +EE KE +L
Sbjct: 608 IEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSL 667
Query: 637 SHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHF 696
+ HSEKLAI YGLIST+ IR++KNLRVCG+CHS KLIS++++REII RDR RFHHF
Sbjct: 668 NLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHF 727
Query: 697 KDGNCSCNDYW 707
++G CSCND+W
Sbjct: 728 RNGQCSCNDFW 738
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 554 bits (1428), Expect = e-157, Method: Compositional matrix adjust.
Identities = 275/675 (40%), Positives = 432/675 (64%), Gaps = 8/675 (1%)
Query: 35 ALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPN 94
+L+ T+ +KQ+H++++ GL + F ++KLI A S FGD+++A VF+ + P
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIH--ASSSFGDITFARQVFDDLPRPQ 83
Query: 95 QVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHA 154
WN IIRG+S ++ A+ Y M L+ P+++TFP +LK+C+ +S + G+ +HA
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 155 HVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSL--RDAVSYTALITGYASRGYL 212
V +LG ++D FV LI +YA+ L SAR VF L R VS+TA+++ YA G
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 213 DDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTN 272
+A ++F +M R+ + P+ +V+VL+A + L+ G + + + GL +
Sbjct: 204 MEALEIFSQM--RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261
Query: 273 ALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEP 332
+L MY+KCG + A+ LF+ ++ ++I WN MI GY +EA+ +F +M+ ++ P
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 333 NDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQV 392
+ ++ S + ACA +G+L+ + ++ Y+ ++ + ++V + ++LIDM+AKCG+++ A V
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYR-DDVFISSALIDMFAKCGSVEGARLV 380
Query: 393 FDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLL 452
FD + + W+AMI G +HG+A +A+SL+ M G+ P+D+TF+G+L ACNH+G++
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMV 440
Query: 453 DIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLG 512
G +FN M D+KI+P+ QHY C++DLLGRAG D+A ++K M ++P +W +LL
Sbjct: 441 REGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLS 499
Query: 513 ACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKV 572
AC+ H +ELGE A+ L ++P N G YV LSN+YA A WD VA +R R+ +KG+ K
Sbjct: 500 ACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKD 559
Query: 573 PGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEEWK 632
GCS +EV + F VGDK HP+ + I ++ I++ L++ GFV + L+D+++E
Sbjct: 560 VGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEA 619
Query: 633 EGALSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNR 692
E L HSE++AIAYGLIST GT +RI KNLR C NCH+ATKLISK+ +REI+ RD NR
Sbjct: 620 EETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNR 679
Query: 693 FHHFKDGNCSCNDYW 707
FHHFKDG CSC DYW
Sbjct: 680 FHHFKDGVCSCGDYW 694
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 552 bits (1423), Expect = e-156, Method: Compositional matrix adjust.
Identities = 283/677 (41%), Positives = 414/677 (61%), Gaps = 5/677 (0%)
Query: 31 QPSLALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETI 90
Q L+S + ++KQ+H +I LH+ F ++ L++ F Y+ L+F
Sbjct: 14 QQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLF--FRQTKYSYLLFSHT 71
Query: 91 REPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGK 150
+ PN ++N++I G + + ++ + G + +TFP +LK+C + S+ G
Sbjct: 72 QFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGI 131
Query: 151 QIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRG 210
+H+ V+K G D TSL+++Y+ +G L A +F++ R V++TAL +GY + G
Sbjct: 132 DLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSG 191
Query: 211 YLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHV 270
+A LF +M E P+ +V VLSAC H+G L+ G W+ +E + N V
Sbjct: 192 RHREAIDLFKKMV--EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFV 249
Query: 271 TNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNI 330
L+++Y+KCG + KAR +F+S+ ++D+++W+ MI GY S KE + LF QMLQ N+
Sbjct: 250 RTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENL 309
Query: 331 EPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAE 390
+P+ + + L +CA LGALDLG+W + ID+ H+ L N+ + +LIDMYAKCG +
Sbjct: 310 KPDQFSIVGFLSSCASLGALDLGEWGISLIDR-HEFLTNLFMANALIDMYAKCGAMARGF 368
Query: 391 QVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAG 450
+VF M K + NA ISGLA +G + ++F + G+ PD TF+G+L C HAG
Sbjct: 369 EVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAG 428
Query: 451 LLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSL 510
L+ G ++FNA+ Y + ++HYGCMVDL GRAG+ D+A L+ M M+P+A +W +L
Sbjct: 429 LIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGAL 488
Query: 511 LGACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMK 570
L CR+ +L E+V K L+ LEP N G YV LSN+Y+ GRWD+ A +R +N KGMK
Sbjct: 489 LSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMK 548
Query: 571 KVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEE 630
K+PG S IE+ VHEFL DK HP S IY L+++ + GFVP T V +D++EE
Sbjct: 549 KIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEE 608
Query: 631 WKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDR 690
KE L +HSEKLA+A GLIST G IR+VKNLRVCG+CH KLISKI REI+ RD
Sbjct: 609 EKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDN 668
Query: 691 NRFHHFKDGNCSCNDYW 707
NRFH F +G+CSCNDYW
Sbjct: 669 NRFHCFTNGSCSCNDYW 685
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 550 bits (1417), Expect = e-155, Method: Compositional matrix adjust.
Identities = 296/723 (40%), Positives = 437/723 (60%), Gaps = 43/723 (5%)
Query: 23 PPYKLLQNQPSLALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSY 82
PP L LS C ++ +IKQ+H+ I++T +++ + L + S +LSY
Sbjct: 5 PPIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSF--LFNLSVSSSSINLSY 62
Query: 83 ALLVFETI-REPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCA 141
AL VF +I P +++N +R S SS P I FY R+ G + ++F ILK+ +
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 142 KISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTA 201
K+SA+ EG ++H K+ DPFV T ++MYA G + AR VF++ S RD V++
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 202 LITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCS-LIE 260
+I Y G +D+A +LF+EM ++ N +P+E + ++SAC G++ + LIE
Sbjct: 183 MIERYCRFGLVDEAFKLFEEM--KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE 240
Query: 261 GH----------------GLG--------------SNLHVTNALIDMYSKCGDLVKARDL 290
G G NL V+ A++ YSKCG L A+ +
Sbjct: 241 NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVI 300
Query: 291 FESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGAL 350
F+ EK+D++ W MI Y + +EAL +F +M S I+P+ V+ SV+ ACA LG L
Sbjct: 301 FDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGIL 360
Query: 351 DLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISG 410
D KW+H+ I N + + +S+ +LI+MYAKCG + A VF+ M + + SW++MI+
Sbjct: 361 DKAKWVHSCIHVNGLE-SELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINA 419
Query: 411 LAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISP 470
L+MHG+A ALSLF+RM E ++P+++TFVGVL C+H+GL++ G++ F +M +Y I+P
Sbjct: 420 LSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITP 479
Query: 471 KLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVAKHL 530
KL+HYGCMVDL GRA L EA ++++M + + IW SL+ ACR+HG LELG+ AK +
Sbjct: 480 KLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRI 539
Query: 531 LELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVG 590
LELEP++ GA VL+SN+YA RW+DV IR + +K + K G S I+ HEFL+G
Sbjct: 540 LELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIG 599
Query: 591 DKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIAYGLI 650
DK H QS IY LDE+ + L+ +G+VPD VL D++EE K+ + HSEKLA+ +GL+
Sbjct: 600 DKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLM 659
Query: 651 STKPGT------TIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCN 704
+ + IRIVKNLRVC +CH KL+SK++ REII RDR RFH +K+G CSC
Sbjct: 660 NEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCR 719
Query: 705 DYW 707
DYW
Sbjct: 720 DYW 722
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 538 bits (1385), Expect = e-152, Method: Compositional matrix adjust.
Identities = 274/677 (40%), Positives = 401/677 (59%), Gaps = 75/677 (11%)
Query: 33 SLALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGD-LSYALLVFETIR 91
+++ L +C+ + +KQ+H++++KTGL +A++K + C S D L YA +VF+
Sbjct: 17 TMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFD 76
Query: 92 EPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQ 151
P+ +WN +IRG S S P ++ Y RM+ S N YTFP +LK+C+ +SA E Q
Sbjct: 77 RPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQ 136
Query: 152 IHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGY 211
IHA + KLG E+D +YA N +LI YA G
Sbjct: 137 IHAQITKLGYEND---------VYAVN----------------------SLINSYAVTGN 165
Query: 212 LDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVT 271
A LFD +P P++ + W
Sbjct: 166 FKLAHLLFDRIP------EPDDVS------------------W----------------- 184
Query: 272 NALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIE 331
N++I Y K G + A LF + +++ ISW MI GY KEAL LF +M S++E
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 332 PNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQ 391
P++V+ + L ACA LGAL+ GKWIH+Y++K ++++V L LIDMYAKCG ++ A +
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSV-LGCVLIDMYAKCGEMEEALE 303
Query: 392 VFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGL 451
VF + K++ +W A+ISG A HG +A+S F M G++P+ ITF VL+AC++ GL
Sbjct: 304 VFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGL 363
Query: 452 LDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLL 511
++ G+ F +M +DY + P ++HYGC+VDLLGRAGL DEA+ ++ M +KP+A IW +LL
Sbjct: 364 VEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423
Query: 512 GACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKK 571
ACR+H +ELGE + + L+ ++P + G YV +N++A +WD A R + ++G+ K
Sbjct: 424 KACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAK 483
Query: 572 VPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDM-DEE 630
VPGCS+I + HEFL GD+ HP+ + I + LE++G+VP+ E+L D+ D++
Sbjct: 484 VPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDD 543
Query: 631 WKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDR 690
+E + HSEKLAI YGLI TKPGT IRI+KNLRVC +CH TKLISKI+ R+I+ RDR
Sbjct: 544 EREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDR 603
Query: 691 NRFHHFKDGNCSCNDYW 707
RFHHF+DG CSC DYW
Sbjct: 604 TRFHHFRDGKCSCGDYW 620
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 528 bits (1359), Expect = e-149, Method: Compositional matrix adjust.
Identities = 275/698 (39%), Positives = 414/698 (59%), Gaps = 44/698 (6%)
Query: 47 KQVHSQIIKT-GLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGH 105
KQ+H+Q I+T L +T S I I + L ALL+F+T++ P + W ++IR
Sbjct: 25 KQLHAQFIRTQSLSHT----SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCF 80
Query: 106 SLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDP 165
+ S A+ +V M SG P+ FP +LKSC + + G+ +H +++LG++ D
Sbjct: 81 TDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140
Query: 166 FVHTSLINMYAQ-----------------------NGE-------------LESARLVFN 189
+ +L+NMYA+ +G+ ++S R VF
Sbjct: 141 YTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFE 200
Query: 190 KSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSL 249
+D VSY +I GYA G +DA ++ EM + P+ T+ +VL + +
Sbjct: 201 VMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGT--TDLKPDSFTLSSVLPIFSEYVDV 258
Query: 250 ELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGY 309
G + + G+ S++++ ++L+DMY+K + + +F + RD ISWN ++ GY
Sbjct: 259 IKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGY 318
Query: 310 THTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNN 369
Y EAL LFRQM+ + ++P V F SV+PACA+L L LGK +H Y+ + +N
Sbjct: 319 VQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG-SN 377
Query: 370 VSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIG 429
+ + ++L+DMY+KCGNIKAA ++FD M SW A+I G A+HG +A+SLF M
Sbjct: 378 IFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 437
Query: 430 EGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFD 489
+G++P+ + FV VL+AC+H GL+D YFN+M + Y ++ +L+HY + DLLGRAG +
Sbjct: 438 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 497
Query: 490 EAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYA 549
EA + M ++P ++W++LL +C VH LEL E VA+ + ++ EN GAYVL+ NMYA
Sbjct: 498 EAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYA 557
Query: 550 GAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDA 609
GRW ++A +R R+ KG++K P CS IE+ + H F+ GD+ HP I E L +
Sbjct: 558 SNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVME 617
Query: 610 LLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGN 669
+EK G+V DTS VL+D+DEE K L HSE+LA+A+G+I+T+PGTTIR+ KN+R+C +
Sbjct: 618 QMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTD 677
Query: 670 CHSATKLISKIFNREIIARDRNRFHHFKDGNCSCNDYW 707
CH A K ISKI REII RD +RFHHF GNCSC DYW
Sbjct: 678 CHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 202/422 (47%), Gaps = 48/422 (11%)
Query: 136 ILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTS---LINMYAQNGELESARLVFNKSS 192
++K+ +I + S+ KQ+HA ++ + HTS +I++Y L A L+F
Sbjct: 11 LIKNPTRIKSKSQAKQLHAQFIR----TQSLSHTSASIVISIYTNLKLLHEALLLFKTLK 66
Query: 193 LRDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELG 252
+++ ++I + + A F EM R P+ + +VL +C M L G
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEM--RASGRCPDHNVFPSVLKSCTMMMDLRFG 124
Query: 253 NWVCSLIEGHGLGSNLHVTNALIDMYSK-----------------------CGDL-VKA- 287
V I G+ +L+ NAL++MY+K GD VKA
Sbjct: 125 ESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAE 184
Query: 288 -----------RDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVT 336
R +FE + ++DV+S+N +I GY + Y++AL + R+M ++++P+ T
Sbjct: 185 TCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFT 244
Query: 337 FLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGM 396
SVLP + + GK IH Y+ + ++V + +SL+DMYAK I+ +E+VF +
Sbjct: 245 LSSVLPIFSEYVDVIKGKEIHGYVIRKGID-SDVYIGSSLVDMYAKSARIEDSERVFSRL 303
Query: 397 GYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGR 456
+ SWN++++G +G+ ++AL LF +M+ ++P + F V+ AC H L +G+
Sbjct: 304 YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGK 363
Query: 457 QYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRV 516
Q +++ + +VD+ + G A + M + D WT+++ +
Sbjct: 364 QLHGYVLRG-GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHAL 421
Query: 517 HG 518
HG
Sbjct: 422 HG 423
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 148/262 (56%), Gaps = 5/262 (1%)
Query: 34 LALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREP 93
L + S+ ++ K++H +I+ G+ + + S L+++ A S + + VF +
Sbjct: 249 LPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKS--ARIEDSERVFSRLYCR 306
Query: 94 NQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIH 153
+ + WN+++ G+ + A++ + +M+ + P F ++ +CA ++ + GKQ+H
Sbjct: 307 DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLH 366
Query: 154 AHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLD 213
+VL+ G S+ F+ ++L++MY++ G +++AR +F++ ++ D VS+TA+I G+A G+
Sbjct: 367 GYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGH 426
Query: 214 DARQLFDEMPIREENFVPNESTVVTVLSACAHMGSL-ELGNWVCSLIEGHGLGSNLHVTN 272
+A LF+EM + + PN+ V VL+AC+H+G + E + S+ + +GL L
Sbjct: 427 EAVSLFEEM--KRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYA 484
Query: 273 ALIDMYSKCGDLVKARDLFESI 294
A+ D+ + G L +A + +
Sbjct: 485 AVADLLGRAGKLEEAYNFISKM 506
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 520 bits (1339), Expect = e-146, Method: Compositional matrix adjust.
Identities = 267/662 (40%), Positives = 403/662 (60%), Gaps = 6/662 (0%)
Query: 47 KQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGHS 106
+Q+H I+K+G + L+ + D A VF+ + E + + WN+II G+
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVD--SARKVFDEMTERDVISWNSIINGYV 272
Query: 107 LSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPF 166
+ + +V+M++SG + T + CA IS G+ +H+ +K +
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 167 VHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIRE 226
+L++MY++ G+L+SA+ VF + S R VSYT++I GYA G +A +LF+EM E
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME--E 390
Query: 227 ENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVK 286
E P+ TV VL+ CA L+ G V I+ + LG ++ V+NAL+DMY+KCG + +
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 450
Query: 287 ARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSN-IEPNDVTFLSVLPACA 345
A +F + +D+ISWN +IGGY+ EAL LF +L+ P++ T VLPACA
Sbjct: 451 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 510
Query: 346 YLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWN 405
L A D G+ IH YI +N ++ + SL+DMYAKCG + A +FD + K L SW
Sbjct: 511 SLSAFDKGREIHGYIMRNGY-FSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWT 569
Query: 406 AMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQD 465
MI+G MHG +A++LF++M G++ D+I+FV +L AC+H+GL+D G ++FN M +
Sbjct: 570 VMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHE 629
Query: 466 YKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGES 525
KI P ++HY C+VD+L R G +A ++ M + PDA IW +LL CR+H ++L E
Sbjct: 630 CKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEK 689
Query: 526 VAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVH 585
VA+ + ELEPEN G YVL++N+YA A +W+ V +R R+ +G++K PGCS IE+ V+
Sbjct: 690 VAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVN 749
Query: 586 EFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAI 645
F+ GD +P++++I L ++ A + + G+ P T L D +E KE AL HSEKLA+
Sbjct: 750 IFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAM 809
Query: 646 AYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCND 705
A G+IS+ G IR+ KNLRVCG+CH K +SK+ REI+ RD NRFH FKDG+CSC
Sbjct: 810 ALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRG 869
Query: 706 YW 707
+W
Sbjct: 870 FW 871
Score = 226 bits (575), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 140/442 (31%), Positives = 228/442 (51%), Gaps = 6/442 (1%)
Query: 78 GDLSYALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFIL 137
GDL A VF+ ++ + WN ++ + S +I + +M+ SG ++YTF +
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 138 KSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAV 197
KS + + ++ G+Q+H +LK G V SL+ Y +N ++SAR VF++ + RD +
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVI 262
Query: 198 SYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCS 257
S+ ++I GY S G + +F +M + + +T+V+V + CA + LG V S
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLV--SGIEIDLATIVSVFAGCADSRLISLGRAVHS 320
Query: 258 LIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKE 317
+ N L+DMYSKCGDL A+ +F + R V+S+ MI GY E
Sbjct: 321 IGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGE 380
Query: 318 ALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLI 377
A+ LF +M + I P+ T +VL CA LD GK +H +I +N ++ + +L+
Sbjct: 381 AVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF-DIFVSNALM 439
Query: 378 DMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEG-LQPDD 436
DMYAKCG+++ AE VF M K + SWN +I G + + A++ALSLF+ ++ E PD+
Sbjct: 440 DMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDE 499
Query: 437 ITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLK 496
T VL AC D GR+ ++++ S + +VD+ + G A L
Sbjct: 500 RTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR-HVANSLVDMYAKCGALLLAHMLFD 558
Query: 497 TMEMKPDAAIWTSLLGACRVHG 518
+ K D WT ++ +HG
Sbjct: 559 DIASK-DLVSWTVMIAGYGMHG 579
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 187/382 (48%), Gaps = 5/382 (1%)
Query: 132 TFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKS 191
T +L+ CA ++ +GK++ + G D + + L MY G+L+ A VF++
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 192 SLRDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLEL 251
+ A+ + L+ A G + LF +M + T V + + + S+
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMM--SSGVEMDSYTFSCVSKSFSSLRSVHG 213
Query: 252 GNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTH 311
G + I G G V N+L+ Y K + AR +F+ + +RDVISWN +I GY
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 312 TSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVS 371
++ L +F QML S IE + T +SV CA + LG+ +H+ K +
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED-R 332
Query: 372 LWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEG 431
+L+DMY+KCG++ +A+ VF M +++ S+ +MI+G A G A +A+ LF M EG
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 432 LQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEA 491
+ PD T VL+ C LLD G++ + I++ + + ++D+ + G EA
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKR-VHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 451
Query: 492 EALLKTMEMKPDAAIWTSLLGA 513
E + M +K D W +++G
Sbjct: 452 ELVFSEMRVK-DIISWNTIIGG 472
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 220/489 (44%), Gaps = 74/489 (15%)
Query: 186 LVFNKSSLRDAVSYTALITGYASRGYLDDARQL--FDEMPIREENFVP----------NE 233
++FN++SLR IT + R D QL F E EN V +
Sbjct: 37 VIFNRASLRTVSDCVDSITTF-DRSVTDANTQLRRFCESG-NLENAVKLLCVSGKWDIDP 94
Query: 234 STVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFES 293
T+ +VL CA SL+ G V + I G+G + ++ + L MY+ CGDL +A +F+
Sbjct: 95 RTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDE 154
Query: 294 IEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLG 353
++ + WN+++ + D+ ++ LF++M+ S +E + TF V + + L ++ G
Sbjct: 155 VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG 214
Query: 354 KWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAM 413
+ +H +I K+ N S+ SL+ Y K + +A +VFD M + + SWN++I+G
Sbjct: 215 EQLHGFILKSGFGERN-SVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 414 HGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGR---------------QY 458
+G A+K LS+F +M+ G++ D T V V + C + L+ +GR ++
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333
Query: 459 FNAMIQDYKISPKLQ---------------HYGCMVDLLGRAGLFDEAEALLKTME---M 500
N ++ Y L Y M+ R GL EA L + ME +
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 501 KPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPENPGAYVLLSN----MYAGAGRWDD 556
PD T++L C + L+ G+ V + + E + G + +SN MYA G +
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE---NDLGFDIFVSNALMDMYAKCGSMQE 450
Query: 557 VATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIY--EMLDEIDALLEKS 614
+ + + K + I +++ + SK+ Y E L + LLE+
Sbjct: 451 AELVFSEMRVKDI--------ISWNTIIGGY---------SKNCYANEALSLFNLLLEEK 493
Query: 615 GFVPDTSEV 623
F PD V
Sbjct: 494 RFSPDERTV 502
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 519 bits (1337), Expect = e-146, Method: Compositional matrix adjust.
Identities = 267/679 (39%), Positives = 394/679 (58%), Gaps = 75/679 (11%)
Query: 31 QPSLALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETI 90
P++ALL + ++Q+H+++ G + ++ A+S L YA + +
Sbjct: 7 HPAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRS 66
Query: 91 REPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSG--FVPNTYTFPFILKSCAKISAISE 148
+P N++IR H S P + FY R++ SG P+ YT F++++C +
Sbjct: 67 EKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRET 126
Query: 149 GKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYAS 208
G Q+H ++ G ++DP V T LI++Y A
Sbjct: 127 GLQVHGMTIRRGFDNDPHVQTGLISLY-------------------------------AE 155
Query: 209 RGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNL 268
G LD ++F+ +P P+ +++ACA
Sbjct: 156 LGCLDSCHKVFNSIP------CPDFVCRTAMVTACA------------------------ 185
Query: 269 HVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQS 328
+CGD+V AR LFE + +RD I+WN MI GY + +EAL +F M
Sbjct: 186 -----------RCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE 234
Query: 329 NIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKA 388
++ N V +SVL AC LGALD G+W H+YI++N K+ V L T+L+D+YAKCG+++
Sbjct: 235 GVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKIT-VRLATTLVDLYAKCGDMEK 293
Query: 389 AEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNH 448
A +VF GM K + +W++ ++GLAM+G +K L LFS M +G+ P+ +TFV VL C+
Sbjct: 294 AMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSV 353
Query: 449 AGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWT 508
G +D G+++F++M ++ I P+L+HYGC+VDL RAG ++A ++++ M MKP AA+W+
Sbjct: 354 VGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWS 413
Query: 509 SLLGACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKG 568
SLL A R++ LELG +K +LELE N GAYVLLSN+YA + WD+V+ +R + KG
Sbjct: 414 SLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKG 473
Query: 569 MKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMD 628
++K PGCS +EV VHEF VGDK HP+ I + +I L +G+ DT+ V++D+D
Sbjct: 474 VRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDID 533
Query: 629 EEWKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIAR 688
EE KE AL HSEK AIA+G++S K IRIVKNLRVCG+CH + +ISKIFNREII R
Sbjct: 534 EEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVR 593
Query: 689 DRNRFHHFKDGNCSCNDYW 707
DRNRFHHFKDG+CSCN +W
Sbjct: 594 DRNRFHHFKDGHCSCNGFW 612
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 519 bits (1337), Expect = e-146, Method: Compositional matrix adjust.
Identities = 276/624 (44%), Positives = 386/624 (61%), Gaps = 89/624 (14%)
Query: 97 IWNNIIRG--HSLSS----SPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGK 150
+WN IIR H++SS SP I Y+RM P+ +TFPF+L S + G+
Sbjct: 26 LWNIIIRAIVHNVSSPQRHSP---ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 151 QIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRG 210
+ HA +L GL+ DPFV TSL+NMY+ S G
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYS-------------------------------SCG 111
Query: 211 YLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHV 270
L A+++FD+ GS +L W
Sbjct: 112 DLRSAQRVFDDS------------------------GSKDLPAW---------------- 131
Query: 271 TNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQML---- 326
N++++ Y+K G + AR LF+ + +R+VISW+ +I GY YKEAL LFR+M
Sbjct: 132 -NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKP 190
Query: 327 -QSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGN 385
++ + PN+ T +VL AC LGAL+ GKW+HAYIDK H +++ + L T+LIDMYAKCG+
Sbjct: 191 NEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEID-IVLGTALIDMYAKCGS 249
Query: 386 IKAAEQVFDGMGYKT-LASWNAMISGLAMHGKADKALSLFSRMI-GEGLQPDDITFVGVL 443
++ A++VF+ +G K + +++AMI LAM+G D+ LFS M + + P+ +TFVG+L
Sbjct: 250 LERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGIL 309
Query: 444 SACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPD 503
AC H GL++ G+ YF MI+++ I+P +QHYGCMVDL GR+GL EAE+ + +M M+PD
Sbjct: 310 GACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPD 369
Query: 504 AAIWTSLLGACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTR 563
IW SLL R+ G ++ E K L+EL+P N GAYVLLSN+YA GRW +V IR
Sbjct: 370 VLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHE 429
Query: 564 LNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEV 623
+ KG+ KVPGCS +EV VVHEF+VGD+ +S+ IY MLDEI L ++G+V DT EV
Sbjct: 430 MEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEV 489
Query: 624 LYDMDEEWKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNR 683
L D++E+ KE ALS+HSEKLAIA+ L+ T+PGT +RI+KNLR+CG+CH K+ISK+F+R
Sbjct: 490 LLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSR 549
Query: 684 EIIARDRNRFHHFKDGNCSCNDYW 707
EI+ RD NRFHHF+DG+CSC D+W
Sbjct: 550 EIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 136/263 (51%), Gaps = 9/263 (3%)
Query: 73 AVSPFGDLSYALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMIL----SGFV- 127
A + G + A +F+ + E N + W+ +I G+ + A+ + M L FV
Sbjct: 137 AYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVR 196
Query: 128 PNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLV 187
PN +T +L +C ++ A+ +GK +HA++ K +E D + T+LI+MYA+ G LE A+ V
Sbjct: 197 PNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRV 256
Query: 188 FNK-SSLRDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHM 246
FN S +D +Y+A+I A G D+ QLF EM +N PN T V +L AC H
Sbjct: 257 FNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTT-SDNINPNSVTFVGILGACVHR 315
Query: 247 GSLELG-NWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIE-KRDVISWNV 304
G + G ++ +IE G+ ++ ++D+Y + G + +A S+ + DV+ W
Sbjct: 316 GLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGS 375
Query: 305 MIGGYTHTSDYKEALMLFRQMLQ 327
++ G D K +++++
Sbjct: 376 LLSGSRMLGDIKTCEGALKRLIE 398
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 518 bits (1335), Expect = e-146, Method: Compositional matrix adjust.
Identities = 289/715 (40%), Positives = 407/715 (56%), Gaps = 59/715 (8%)
Query: 14 ILHFPP----------SSDPPYKLLQNQPSLAL------LSKCTNMQNIKQVHSQIIKTG 57
+LHFP SS P +L Q P + L +++ ++ VHS+II
Sbjct: 10 LLHFPKFRKFQSRKVSSSLPKLELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILED 69
Query: 58 LHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKF 117
L KL+ A + D++ A VF+ I E N +I N +IR + + +K
Sbjct: 70 LRCNSSLGVKLMR--AYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKV 127
Query: 118 YVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQ 177
+ M P+ YTFP +LK+C+ I G++IH K+GL S FV L++MY +
Sbjct: 128 FGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGK 187
Query: 178 NGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVV 237
G L ARLV ++ S RD VS+ +L+ GYA DDA
Sbjct: 188 CGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDA---------------------- 225
Query: 238 TVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKR 297
L C M S+++ H G+ + A+ + ++ +++ +D+F + K+
Sbjct: 226 --LEVCREMESVKIS---------HDAGTMASLLPAVSNTTTE--NVMYVKDMFFKMGKK 272
Query: 298 DVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIH 357
++SWNVMIG Y + EA+ L+ +M EP+ V+ SVLPAC AL LGK IH
Sbjct: 273 SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIH 332
Query: 358 AYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKA 417
YI++ + + N+ L +LIDMYAKCG ++ A VF+ M + + SW AMIS G+
Sbjct: 333 GYIERK-KLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRG 391
Query: 418 DKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGC 477
A++LFS++ GL PD I FV L+AC+HAGLL+ GR F M YKI+P+L+H C
Sbjct: 392 CDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLAC 451
Query: 478 MVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPEN 537
MVDLLGRAG EA ++ M M+P+ +W +LLGACRVH ++G A L +L PE
Sbjct: 452 MVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQ 511
Query: 538 PGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQS 597
G YVLLSN+YA AGRW++V IR + KG+KK PG S++EV ++H FLVGD+ HPQS
Sbjct: 512 SGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQS 571
Query: 598 KHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIAYGLISTK---- 653
IY LD + +++ G+VPD+ L+D++EE KE L+ HSEKLAI + L++TK
Sbjct: 572 DEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEE 631
Query: 654 -PGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCNDYW 707
TIRI KNLR+CG+CH A KLIS+I +REII RD NRFH F+ G CSC DYW
Sbjct: 632 DSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 517 bits (1332), Expect = e-145, Method: Compositional matrix adjust.
Identities = 266/617 (43%), Positives = 388/617 (62%), Gaps = 8/617 (1%)
Query: 98 WNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVL 157
WN++I + S A+ + M P +FP +K+C+ + I GKQ H
Sbjct: 44 WNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAF 103
Query: 158 KLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQ 217
G +SD FV ++LI MY+ G+LE AR VF++ R+ VS+T++I GY G DA
Sbjct: 104 VFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVS 163
Query: 218 LFDEMPIREEN----FVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTNA 273
LF ++ + E + + +V+V+SAC+ + + L + S + G + V N
Sbjct: 164 LFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNT 223
Query: 274 LIDMYSKCGD--LVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIE 331
L+D Y+K G+ + AR +F+ I +D +S+N ++ Y + EA +FR+++++ +
Sbjct: 224 LLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVV 283
Query: 332 P-NDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAE 390
N +T +VL A ++ GAL +GK IH + + + ++V + TS+IDMY KCG ++ A
Sbjct: 284 TFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLE-DDVIVGTSIIDMYCKCGRVETAR 342
Query: 391 QVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAG 450
+ FD M K + SW AMI+G MHG A KAL LF MI G++P+ ITFV VL+AC+HAG
Sbjct: 343 KAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAG 402
Query: 451 LLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSL 510
L G ++FNAM + + P L+HYGCMVDLLGRAG +A L++ M+MKPD+ IW+SL
Sbjct: 403 LHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSL 462
Query: 511 LGACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMK 570
L ACR+H +EL E L EL+ N G Y+LLS++YA AGRW DV +R + ++G+
Sbjct: 463 LAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLV 522
Query: 571 KVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEE 630
K PG S +E+ VH FL+GD+ HPQ + IYE L E++ L ++G+V +TS V +D+DEE
Sbjct: 523 KPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEE 582
Query: 631 WKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDR 690
KE L HSEKLAIA+G+++T PG+T+ +VKNLRVC +CH+ KLISKI +RE + RD
Sbjct: 583 EKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDA 642
Query: 691 NRFHHFKDGNCSCNDYW 707
RFHHFKDG CSC DYW
Sbjct: 643 KRFHHFKDGGCSCGDYW 659
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 201/421 (47%), Gaps = 48/421 (11%)
Query: 37 LSKCTNMQNI---KQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREP 93
+ C+++ +I KQ H Q G + F S LI + S G L A VF+ I +
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVM--YSTCGKLEDARKVFDEIPKR 140
Query: 94 NQVIWNNIIRGHSLSSSPVVAIKFYVRMIL------SGFVPNTYTFPFILKSCAKISAIS 147
N V W ++IRG+ L+ + + A+ + +++ ++ ++ +C+++ A
Sbjct: 141 NIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG 200
Query: 148 EGKQIHAHVLKLGLESDPFVHTSLINMYAQNGE--LESARLVFNKSSLRDAVSYTALITG 205
+ IH+ V+K G + V +L++ YA+ GE + AR +F++ +D VSY ++++
Sbjct: 201 LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSV 260
Query: 206 YASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLG 265
YA G ++A ++F + ++ + N T+ TVL A +H G+L +G + + GL
Sbjct: 261 YAQSGMSNEAFEVFRRL-VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLE 319
Query: 266 SNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQM 325
++ V ++IDMY KCG + AR F+ ++ ++V SW MI GY +AL LF M
Sbjct: 320 DDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM 379
Query: 326 LQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGN 385
+ S + PN +TF+SVL AC++ G +V W M + G
Sbjct: 380 IDSGVRPNYITFVSVLAACSHAGL-------------------HVEGWRWFNAMKGRFGV 420
Query: 386 IKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSA 445
E + M+ L G KA L RM ++PD I + +L+A
Sbjct: 421 EPGLEH------------YGCMVDLLGRAGFLQKAYDLIQRM---KMKPDSIIWSSLLAA 465
Query: 446 C 446
C
Sbjct: 466 C 466
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 150/329 (45%), Gaps = 62/329 (18%)
Query: 294 IEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLG 353
++K DV SWN +I + D EAL+ F M + ++ P +F + AC+ L + G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 354 KWIH--AYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGL 411
K H A++ +Q +++ + ++LI MY+ CG ++ A +VFD + + + SW +MI G
Sbjct: 96 KQTHQQAFV-FGYQ--SDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGY 152
Query: 412 AMHGKADKALSLFSRMIGEGLQPDDITF------VGVLSACNHA---------------- 449
++G A A+SLF ++ + DD F V V+SAC+
Sbjct: 153 DLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKR 212
Query: 450 ----------GLLD-----------IGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLF 488
LLD + R+ F+ ++ ++S Y ++ + ++G+
Sbjct: 213 GFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVS-----YNSIMSVYAQSGMS 267
Query: 489 DEA----EALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPENP---GAY 541
+EA L+K + +A +++L A G L +G+ + ++ + E+ G
Sbjct: 268 NEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS 327
Query: 542 VLLSNMYAGAGRWDDVATIRTRLNDKGMK 570
++ +MY GR + R+ +K ++
Sbjct: 328 II--DMYCKCGRVETARKAFDRMKNKNVR 354
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 514 bits (1324), Expect = e-145, Method: Compositional matrix adjust.
Identities = 298/770 (38%), Positives = 419/770 (54%), Gaps = 100/770 (12%)
Query: 36 LLSKCTNMQN----IKQVHSQIIKTGLHNTQFALSKLIEI-------------------- 71
LL K N N + VH ++IK+GL + + ++ L+ +
Sbjct: 19 LLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR 78
Query: 72 ---------CAVSPFGDLSYALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMI 122
A S GD+ F+ + + + V W +I G+ AI+ M+
Sbjct: 79 TAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMV 138
Query: 123 LSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELE 182
G P +T +L S A + GK++H+ ++KLGL + V SL+NMYA+ G+
Sbjct: 139 KEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPM 198
Query: 183 SARLVFNKSSLRDA-------------------------------VSYTALITGYASRGY 211
A+ VF++ +RD V++ ++I+G+ RGY
Sbjct: 199 MAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGY 258
Query: 212 LDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVT 271
A +F +M +R+ P+ T+ +VLSACA++ L +G + S I G + V
Sbjct: 259 DLRALDIFSKM-LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVL 317
Query: 272 NALIDMYSKCG---------------------------------DLVKARDLFESIEKRD 298
NALI MYS+CG D+ +A+++F S++ RD
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRD 377
Query: 299 VISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHA 358
V++W MI GY Y EA+ LFR M+ PN T ++L + L +L GK IH
Sbjct: 378 VVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHG 437
Query: 359 YIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMG-YKTLASWNAMISGLAMHGKA 417
K+ + + +VS+ +LI MYAK GNI +A + FD + + SW +MI LA HG A
Sbjct: 438 SAVKSGE-IYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHA 496
Query: 418 DKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGC 477
++AL LF M+ EGL+PD IT+VGV SAC HAGL++ GRQYF+ M KI P L HY C
Sbjct: 497 EEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYAC 556
Query: 478 MVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPEN 537
MVDL GRAGL EA+ ++ M ++PD W SLL ACRVH ++LG+ A+ LL LEPEN
Sbjct: 557 MVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPEN 616
Query: 538 PGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQS 597
GAY L+N+Y+ G+W++ A IR + D +KK G S IEV VH F V D HP+
Sbjct: 617 SGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEK 676
Query: 598 KHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIAYGLISTKPGTT 657
IY + +I ++K G+VPDT+ VL+D++EE KE L HHSEKLAIA+GLIST TT
Sbjct: 677 NEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTT 736
Query: 658 IRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCNDYW 707
+RI+KNLRVC +CH+A K ISK+ REII RD RFHHFKDG CSC DYW
Sbjct: 737 LRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 513 bits (1320), Expect = e-144, Method: Compositional matrix adjust.
Identities = 280/708 (39%), Positives = 410/708 (57%), Gaps = 51/708 (7%)
Query: 47 KQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGHS 106
+ H+ + TG + F + L+ + S LS A VF+ + + V WN+II ++
Sbjct: 147 ESAHALSLVTGFISNVFVGNALVAM--YSRCRSLSDARKVFDEMSVWDVVSWNSIIESYA 204
Query: 107 LSSSPVVAIKFYVRMILS-GFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDP 165
P VA++ + RM G P+ T +L CA + S GKQ+H + + +
Sbjct: 205 KLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNM 264
Query: 166 FVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMP-- 223
FV L++MYA+ G ++ A VF+ S++D VS+ A++ GY+ G +DA +LF++M
Sbjct: 265 FVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEE 324
Query: 224 -------------------------------IREENFVPNESTVVTVLSACAHMGSLELG 252
+ PNE T+++VLS CA +G+L G
Sbjct: 325 KIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHG 384
Query: 253 NWV-CSLIE------GHGLGSNLHVTNALIDMYSKCGDLVKARDLFESI--EKRDVISWN 303
+ C I+ +G G V N LIDMY+KC + AR +F+S+ ++RDV++W
Sbjct: 385 KEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444
Query: 304 VMIGGYTHTSDYKEALMLFRQMLQSNIE--PNDVTFLSVLPACAYLGALDLGKWIHAYID 361
VMIGGY+ D +AL L +M + + + PN T L ACA L AL +GK IHAY
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYAL 504
Query: 362 KNHQKLNNVSLWTS--LIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADK 419
+N Q N V L+ S LIDMYAKCG+I A VFD M K +W ++++G MHG ++
Sbjct: 505 RNQQ--NAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEE 562
Query: 420 ALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMV 479
AL +F M G + D +T + VL AC+H+G++D G +YFN M + +SP +HY C+V
Sbjct: 563 ALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLV 622
Query: 480 DLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPENPG 539
DLLGRAG + A L++ M M+P +W + L CR+HG++ELGE A+ + EL + G
Sbjct: 623 DLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDG 682
Query: 540 AYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKH 599
+Y LLSN+YA AGRW DV IR+ + KG+KK PGCS +E F VGDK HP +K
Sbjct: 683 SYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKE 742
Query: 600 IYEMLDEIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIAYGLISTKPGTTIR 659
IY++L + ++ G+VP+T L+D+D+E K+ L HSEKLA+AYG+++T G IR
Sbjct: 743 IYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIR 802
Query: 660 IVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCNDYW 707
I KNLRVCG+CH+A +S+I + +II RD +RFHHFK+G+CSC YW
Sbjct: 803 ITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 250 bits (638), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 168/554 (30%), Positives = 263/554 (47%), Gaps = 71/554 (12%)
Query: 19 PSSDPPYKLLQNQPSLALLSKCTNMQNIKQVHSQIIKTG---LHNTQFALSKLIEICAVS 75
P PP+ + KC + +K +H +++ G L+ T +S I +
Sbjct: 28 PEITPPF-----------IHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISV---- 72
Query: 76 PFGDLSYALLVFETIREPNQVI--WNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTF 133
G LS+A+ + + + WN++IR + + + + M + P+ YTF
Sbjct: 73 --GCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTF 130
Query: 134 PFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSL 193
PF+ K+C +IS++ G+ HA L G S+ FV +L+ MY++ L AR VF++ S+
Sbjct: 131 PFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSV 190
Query: 194 RDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGN 253
D VS+ ++I YA G A ++F M E P+ T+V VL CA +G+ LG
Sbjct: 191 WDVVSWNSIIESYAKLGKPKVALEMFSRM-TNEFGCRPDNITLVNVLPPCASLGTHSLGK 249
Query: 254 WVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTS 313
+ + N+ V N L+DMY+KCG + +A +F ++ +DV+SWN M+ GY+
Sbjct: 250 QLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIG 309
Query: 314 DYKEALMLF-----------------------------------RQMLQSNIEPNDVTFL 338
+++A+ LF RQML S I+PN+VT +
Sbjct: 310 RFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLI 369
Query: 339 SVLPACAYLGALDLGKWIHAY-------IDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQ 391
SVL CA +GAL GK IH Y + KN N+ + LIDMYAKC + A
Sbjct: 370 SVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI-NQLIDMYAKCKKVDTARA 428
Query: 392 VFDGMGYKT--LASWNAMISGLAMHGKADKALSLFSRMIGEGLQ--PDDITFVGVLSACN 447
+FD + K + +W MI G + HG A+KAL L S M E Q P+ T L AC
Sbjct: 429 MFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA 488
Query: 448 HAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIW 507
L IG+Q +++ + + L C++D+ + G +A + M M + W
Sbjct: 489 SLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM-MAKNEVTW 547
Query: 508 TSLLGACRVHGRLE 521
TSL+ +HG E
Sbjct: 548 TSLMTGYGMHGYGE 561
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 510 bits (1314), Expect = e-143, Method: Compositional matrix adjust.
Identities = 265/652 (40%), Positives = 389/652 (59%), Gaps = 34/652 (5%)
Query: 79 DLSYALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRM----------ILSGFVP 128
+L A +FE + E + WN ++ G++ + A + RM +LS +V
Sbjct: 141 NLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQ 200
Query: 129 NTY------------TFPFILKSCAKISAISEGKQIHAHVLKLGLE-SDPFVHTSLINMY 175
N+ + + +C + + K + A + D ++I Y
Sbjct: 201 NSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGY 260
Query: 176 AQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNEST 235
AQ+G+++ AR +F++S ++D ++TA+++GY +++AR+LFD+MP R NE +
Sbjct: 261 AQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER------NEVS 314
Query: 236 VVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIE 295
+L+ +E+ + ++ N+ N +I Y++CG + +A++LF+ +
Sbjct: 315 WNAMLAGYVQGERMEMAKELFDVMPCR----NVSTWNTMITGYAQCGKISEAKNLFDKMP 370
Query: 296 KRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKW 355
KRD +SW MI GY+ + EAL LF QM + N +F S L CA + AL+LGK
Sbjct: 371 KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQ 430
Query: 356 IHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHG 415
+H + K + + +L+ MY KCG+I+ A +F M K + SWN MI+G + HG
Sbjct: 431 LHGRLVKGGYE-TGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHG 489
Query: 416 KADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHY 475
+ AL F M EGL+PDD T V VLSAC+H GL+D GRQYF M QDY + P QHY
Sbjct: 490 FGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHY 549
Query: 476 GCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEP 535
CMVDLLGRAGL ++A L+K M +PDAAIW +LLGA RVHG EL E+ A + +EP
Sbjct: 550 ACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEP 609
Query: 536 ENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHP 595
EN G YVLLSN+YA +GRW DV +R R+ DKG+KKVPG S IE+ + H F VGD+ HP
Sbjct: 610 ENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHP 669
Query: 596 QSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIAYGLISTKPG 655
+ I+ L+E+D ++K+G+V TS VL+D++EE KE + +HSE+LA+AYG++ G
Sbjct: 670 EKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSG 729
Query: 656 TTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCNDYW 707
IR++KNLRVC +CH+A K +++I R II RD NRFHHFKDG+CSC DYW
Sbjct: 730 RPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 139 bits (351), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 138/526 (26%), Positives = 225/526 (42%), Gaps = 117/526 (22%)
Query: 168 HTSLINMYAQNGELESARLVFNKSSLRDAVSYTALI------------------------ 203
+ +I+ Y +NGE E AR +F++ RD VS+ +I
Sbjct: 98 YNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDV 157
Query: 204 -------TGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLS------ACAHMGSLE 250
+GYA G +DDAR +FD MP E+N V + + + AC S E
Sbjct: 158 CSWNTMLSGYAQNGCVDDARSVFDRMP--EKNDVSWNALLSAYVQNSKMEEACMLFKSRE 215
Query: 251 ---LGNWVC---------SLIEGHGLGSNLHVT-----NALIDMYSKCGDLVKARDLFES 293
L +W C ++E +++V N +I Y++ G + +AR LF+
Sbjct: 216 NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275
Query: 294 IEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLG 353
+DV +W M+ GY +EA LF +M E N+V++ ++L +++
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMA 331
Query: 354 KWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAM 413
K + + NVS W ++I YA+CG I A+ +FD M + SW AMI+G +
Sbjct: 332 KELFDVM-----PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQ 386
Query: 414 HGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQ-DYKISPKL 472
G + +AL LF +M EG + + +F LS C L++G+Q +++ Y+
Sbjct: 387 SGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET---- 442
Query: 473 QHYGCMVD-----LLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVA 527
GC V + + G +EA L K M K D W +++ HG GE VA
Sbjct: 443 ---GCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHG---FGE-VA 494
Query: 528 KHLLE------LEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVG 581
E L+P++ +LS A T L DKG +
Sbjct: 495 LRFFESMKREGLKPDDATMVAVLS------------ACSHTGLVDKGRQYFY-------- 534
Query: 582 SVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDM 627
++ ++ V P S+H M+D LL ++G + D ++ +M
Sbjct: 535 TMTQDY----GVMPNSQHYACMVD----LLGRAGLLEDAHNLMKNM 572
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 132/317 (41%), Gaps = 49/317 (15%)
Query: 266 SNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQM 325
S++ N I Y + G +A +F+ + + +S+N MI GY +++ A LF +M
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 326 LQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGN 385
+ ++ +V Y+ +LGK + +V W +++ YA+ G
Sbjct: 122 PERDLVSWNVMIK------GYVRNRNLGKARELF---EIMPERDVCSWNTMLSGYAQNGC 172
Query: 386 IKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLF--------------------S 425
+ A VFD M K SWNA++S + K ++A LF
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKK 232
Query: 426 RMIGEGLQ-------PDDITFVGVLSACNHAGLLDIGRQYFN-AMIQDYKISPKLQHYGC 477
+ I E Q D +++ +++ +G +D RQ F+ + +QD + +
Sbjct: 233 KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQD------VFTWTA 286
Query: 478 MVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEP-E 536
MV + + +EA L M + + + W ++L R+E+ AK L ++ P
Sbjct: 287 MVSGYIQNRMVEEARELFDKMPERNEVS-WNAMLAGYVQGERMEM----AKELFDVMPCR 341
Query: 537 NPGAYVLLSNMYAGAGR 553
N + + YA G+
Sbjct: 342 NVSTWNTMITGYAQCGK 358
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 508 bits (1308), Expect = e-143, Method: Compositional matrix adjust.
Identities = 272/728 (37%), Positives = 408/728 (56%), Gaps = 71/728 (9%)
Query: 48 QVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGHSL 107
Q H++I+K+G N + +KLI + S + + A LV ++I +P ++++I +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIA--SYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 108 SSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFV 167
+ +I + RM G +P+++ P + K CA++SA GKQIH GL+ D FV
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 168 HTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEM----- 222
S+ +MY + G + AR VF++ S +D V+ +AL+ YA +G L++ ++ EM
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 223 ----------------------------PIREENFVPNESTVVTVLSACAHMGSLELGNW 254
I F P++ TV +VL + L +G
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 255 VCSLIEGHGLGSNLHVTNALIDMYSKCGDLV----------------------------- 285
+ + GL + V +A+IDMY K G +
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 286 --KARDLFESIEKR----DVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLS 339
KA ++FE +++ +V+SW +I G EAL LFR+M + ++PN VT S
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPS 393
Query: 340 VLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYK 399
+LPAC + AL G+ H + + H L+NV + ++LIDMYAKCG I ++ VF+ M K
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHL-LDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 400 TLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYF 459
L WN++++G +MHGKA + +S+F ++ L+PD I+F +LSAC GL D G +YF
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 460 NAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGR 519
M ++Y I P+L+HY CMV+LLGRAG EA L+K M +PD+ +W +LL +CR+
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNN 572
Query: 520 LELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIE 579
++L E A+ L LEPENPG YVLLSN+YA G W +V +IR ++ G+KK PGCS I+
Sbjct: 573 VDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQ 632
Query: 580 VGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHH 639
V + V+ L GDK HPQ I E +DEI + KSG P+ L+D++E+ +E L H
Sbjct: 633 VKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGH 692
Query: 640 SEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDG 699
SEKLA+ +GL++T GT ++++KNLR+CG+CH+ K IS REI RD NRFHHFKDG
Sbjct: 693 SEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDG 752
Query: 700 NCSCNDYW 707
CSC D+W
Sbjct: 753 ICSCGDFW 760
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 507 bits (1306), Expect = e-142, Method: Compositional matrix adjust.
Identities = 269/707 (38%), Positives = 423/707 (59%), Gaps = 41/707 (5%)
Query: 37 LSKCTNMQ---NIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREP 93
LS C + N Q+H I+K G F + L+ A G+L A VF+ + E
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYA--ECGELDSARKVFDEMSER 198
Query: 94 NQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFV-PNTYTFPFILKSCAKISAISEGKQI 152
N V W ++I G++ A+ + RM+ V PN+ T ++ +CAK+ + G+++
Sbjct: 199 NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV 258
Query: 153 HAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYL 212
+A + G+E + + ++L++MY + ++ A+ +F++ + A+ + Y +G
Sbjct: 259 YAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLT 318
Query: 213 DDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTN 272
+A +F+ M + P+ ++++ +S+C+ + ++ G + +G S ++ N
Sbjct: 319 REALGVFNLM--MDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN 376
Query: 273 ALIDMYSKC-------------------------------GDLVKARDLFESIEKRDVIS 301
ALIDMY KC G++ A + FE++ +++++S
Sbjct: 377 ALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS 436
Query: 302 WNVMIGGYTHTSDYKEALMLFRQML-QSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYI 360
WN +I G S ++EA+ +F M Q + + VT +S+ AC +LGALDL KWI+ YI
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 361 DKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKA 420
+KN +L+ V L T+L+DM+++CG+ ++A +F+ + + +++W A I +AM G A++A
Sbjct: 497 EKNGIQLD-VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 421 LSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVD 480
+ LF MI +GL+PD + FVG L+AC+H GL+ G++ F +M++ + +SP+ HYGCMVD
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615
Query: 481 LLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPENPGA 540
LLGRAGL +EA L++ M M+P+ IW SLL ACRV G +E+ A+ + L PE G+
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS 675
Query: 541 YVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHI 600
YVLLSN+YA AGRW+D+A +R + +KG++K PG SSI++ HEF GD+ HP+ +I
Sbjct: 676 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNI 735
Query: 601 YEMLDEIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIAYGLISTKPGTTIRI 660
MLDE+ G VPD S VL D+DE+ K LS HSEKLA+AYGLIS+ GTTIRI
Sbjct: 736 EAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRI 795
Query: 661 VKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCNDYW 707
VKNLRVC +CHS K SK++NREII RD NRFH+ + G CSC D+W
Sbjct: 796 VKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 276 bits (705), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 176/547 (32%), Positives = 276/547 (50%), Gaps = 46/547 (8%)
Query: 1 MALPPSSLTLSPSILHFPPSSDPPY----KLLQNQPSLALLSKCTNMQNIKQVHSQIIKT 56
MA+ + L LSP +L ++ P K + PS L C + +K H + K
Sbjct: 1 MAMLGNVLHLSPMVLATTTTTKPSLLNQSKCTKATPSS--LKNCKTIDELKMFHRSLTKQ 58
Query: 57 GLHNTQFALSKLI-EICAVSPFGDLSYALLVFETIREPNQV-IWNNIIRGHSLSSSPVVA 114
GL N ++KL+ C + LS+A VFE ++N++IRG++ S A
Sbjct: 59 GLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEA 118
Query: 115 IKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINM 174
I ++RM+ SG P+ YTFPF L +CAK A G QIH ++K+G D FV SL++
Sbjct: 119 ILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHF 178
Query: 175 YAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNES 234
YA+ GEL+SAR VF++ S R+ VS+T++I GYA R + DA LF M +R+E PN
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM-VRDEEVTPNSV 237
Query: 235 TVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESI 294
T+V V+SACA + LE G V + I G+ N + +AL+DMY KC + A+ LF+
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 295 EKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGK 354
++ N M Y +EAL +F M+ S + P+ ++ LS + +C+ L + GK
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357
Query: 355 WIHAYIDKN-HQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAM 413
H Y+ +N + +N+ +LIDMY KC A ++FD M KT+ +WN++++G
Sbjct: 358 SCHGYVLRNGFESWDNIC--NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVE 415
Query: 414 HGKADKALSLFSRM--------------------------------IGEGLQPDDITFVG 441
+G+ D A F M EG+ D +T +
Sbjct: 416 NGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMS 475
Query: 442 VLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMK 501
+ SAC H G LD+ + + I+ I ++ +VD+ R G + A ++ ++ +
Sbjct: 476 IASACGHLGALDLAK-WIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR 534
Query: 502 PDAAIWT 508
D + WT
Sbjct: 535 -DVSAWT 540
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 506 bits (1303), Expect = e-142, Method: Compositional matrix adjust.
Identities = 258/674 (38%), Positives = 407/674 (60%), Gaps = 18/674 (2%)
Query: 47 KQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGHS 106
KQVH+ ++ G N+ F ++ L+ + G L+ + ++ + + V WN ++
Sbjct: 222 KQVHAYGLRKGELNS-FIINTLVAM--YGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 107 LSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLG-LESDP 165
+ + A+++ M+L G P+ +T +L +C+ + + GK++HA+ LK G L+ +
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 166 FVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIR 225
FV ++L++MY ++ S R VF+ R + A+I GY+ + +A LF M
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGME-E 397
Query: 226 EENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLV 285
+ N +T+ V+ AC G+ + + GL + V N L+DMYS+ G +
Sbjct: 398 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKID 457
Query: 286 KARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQML-----------QSNIEPND 334
A +F +E RD+++WN MI GY + +++AL+L +M + +++PN
Sbjct: 458 IAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNS 517
Query: 335 VTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFD 394
+T +++LP+CA L AL GK IHAY KN+ +V++ ++L+DMYAKCG ++ + +VFD
Sbjct: 518 ITLMTILPSCAALSALAKGKEIHAYAIKNNLA-TDVAVGSALVDMYAKCGCLQMSRKVFD 576
Query: 395 GMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDI 454
+ K + +WN +I MHG +A+ L M+ +G++P+++TF+ V +AC+H+G++D
Sbjct: 577 QIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDE 636
Query: 455 GRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPD-AAIWTSLLGA 513
G + F M DY + P HY C+VDLLGRAG EA L+ M + A W+SLLGA
Sbjct: 637 GLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 696
Query: 514 CRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVP 573
R+H LE+GE A++L++LEP YVLL+N+Y+ AG WD +R + ++G++K P
Sbjct: 697 SRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEP 756
Query: 574 GCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEEWKE 633
GCS IE G VH+F+ GD HPQS+ + L+ + + K G+VPDTS VL++++E+ KE
Sbjct: 757 GCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKE 816
Query: 634 GALSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRF 693
L HSEKLAIA+G+++T PGT IR+ KNLRVC +CH ATK ISKI +REII RD RF
Sbjct: 817 ILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRF 876
Query: 694 HHFKDGNCSCNDYW 707
H FK+G CSC DYW
Sbjct: 877 HRFKNGTCSCGDYW 890
Score = 205 bits (522), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 215/419 (51%), Gaps = 10/419 (2%)
Query: 98 WNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVL 157
W +++R S+ A+ YV MI+ G P+ Y FP +LK+ A + + GKQIHAHV
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 158 KLGLESDPF-VHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDAR 216
K G D V +L+N+Y + G+ + VF++ S R+ VS+ +LI+ S + A
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 217 QLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGS---NLHVTNA 273
+ F M +EN P+ T+V+V++AC+++ E G + + +GL N + N
Sbjct: 185 EAFRCM--LDENVEPSSFTLVSVVTACSNLPMPE-GLMMGKQVHAYGLRKGELNSFIINT 241
Query: 274 LIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPN 333
L+ MY K G L ++ L S RD+++WN ++ EAL R+M+ +EP+
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301
Query: 334 DVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVF 393
+ T SVLPAC++L L GK +HAY KN N + ++L+DMY C + + +VF
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVF 361
Query: 394 DGMGYKTLASWNAMISGLAMHGKADKALSLFSRM-IGEGLQPDDITFVGVLSACNHAGLL 452
DGM + + WNAMI+G + + +AL LF M GL + T GV+ AC +G
Sbjct: 362 DGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421
Query: 453 DIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLL 511
++ + + + ++D+ R G D A + ME + D W +++
Sbjct: 422 S-RKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMI 478
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 134/503 (26%), Positives = 244/503 (48%), Gaps = 26/503 (5%)
Query: 35 ALLSKCTNMQNI---KQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIR 91
ALL ++Q++ KQ+H+ + K G ++ + + GD VF+ I
Sbjct: 102 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL-VNLYRKCGDFGAVYKVFDRIS 160
Query: 92 EPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKI---SAISE 148
E NQV WN++I +A++ + M+ P+++T ++ +C+ + +
Sbjct: 161 ERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMM 220
Query: 149 GKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYAS 208
GKQ+HA+ L+ G E + F+ +L+ MY + G+L S++++ RD V++ +++
Sbjct: 221 GKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279
Query: 209 RGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHG-LGSN 267
L +A + EM + E P+E T+ +VL AC+H+ L G + + +G L N
Sbjct: 280 NEQLLEALEYLREMVL--EGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 337
Query: 268 LHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQ 327
V +AL+DMY C ++ R +F+ + R + WN MI GY+ KEAL+LF M +
Sbjct: 338 SFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEE 397
Query: 328 S-NIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNI 386
S + N T V+PAC GA + IH ++ K + + +L+DMY++ G I
Sbjct: 398 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRF-VQNTLMDMYSRLGKI 456
Query: 387 KAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRM------IGEG-----LQPD 435
A ++F M + L +WN MI+G + AL L +M + +G L+P+
Sbjct: 457 DIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPN 516
Query: 436 DITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALL 495
IT + +L +C L G++ I++ ++ + +VD+ + G + +
Sbjct: 517 SITLMTILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCLQMSRKVF 575
Query: 496 KTMEMKPDAAIWTSLLGACRVHG 518
+ K + W ++ A +HG
Sbjct: 576 DQIPQK-NVITWNVIIMAYGMHG 597
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 131/240 (54%), Gaps = 8/240 (3%)
Query: 302 WNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYID 361
W ++ ++ +EA++ + M+ I+P++ F ++L A A L ++LGK IHA++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 362 KNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKAL 421
K +++V++ +L+++Y KCG+ A +VFD + + SWN++IS L K + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 422 SLFSRMIGEGLQPDDITFVGVLSACNHAGL---LDIGRQYFNAMIQDYKISPKLQHYGCM 478
F M+ E ++P T V V++AC++ + L +G+Q ++ +++ + +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFI--INTL 242
Query: 479 VDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGA-CRVHGRLELGESVAKHLLE-LEPE 536
V + G+ G ++ LL + + D W ++L + C+ LE E + + +LE +EP+
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 504 bits (1297), Expect = e-141, Method: Compositional matrix adjust.
Identities = 267/679 (39%), Positives = 413/679 (60%), Gaps = 15/679 (2%)
Query: 34 LALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEI-CAVSPFGDLSYALLVFETIRE 92
LA K ++ +QVH +K GL + LI + C + FG +A VF+ + E
Sbjct: 322 LATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFG---FARTVFDNMSE 378
Query: 93 PNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKI-SAISEGKQ 151
+ + WN++I G + + V A+ +++++ G P+ YT +LK+ + + +S KQ
Sbjct: 379 RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQ 438
Query: 152 IHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGY 211
+H H +K+ SD FV T+LI+ Y++N ++ A ++F + + D V++ A++ GY
Sbjct: 439 VHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHD 497
Query: 212 LDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVT 271
+LF M + E ++ T+ TV C + ++ G V + G +L V+
Sbjct: 498 GHKTLKLFALMHKQGER--SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS 555
Query: 272 NALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIE 331
+ ++DMY KCGD+ A+ F+SI D ++W MI G + + A +F QM +
Sbjct: 556 SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVL 615
Query: 332 PNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVS---LWTSLIDMYAKCGNIKA 388
P++ T ++ A + L AL+ G+ IHA N KLN + + TSL+DMYAKCG+I
Sbjct: 616 PDEFTIATLAKASSCLTALEQGRQIHA----NALKLNCTNDPFVGTSLVDMYAKCGSIDD 671
Query: 389 AEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNH 448
A +F + + +WNAM+ GLA HG+ + L LF +M G++PD +TF+GVLSAC+H
Sbjct: 672 AYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSH 731
Query: 449 AGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWT 508
+GL+ ++ +M DY I P+++HY C+ D LGRAGL +AE L+++M M+ A+++
Sbjct: 732 SGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYR 791
Query: 509 SLLGACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKG 568
+LL ACRV G E G+ VA LLELEP + AYVLLSNMYA A +WD++ RT +
Sbjct: 792 TLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHK 851
Query: 569 MKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMD 628
+KK PG S IEV + +H F+V D+ + Q++ IY + ++ +++ G+VP+T L D++
Sbjct: 852 VKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVE 911
Query: 629 EEWKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIAR 688
EE KE AL +HSEKLA+A+GL+ST P T IR++KNLRVCG+CH+A K I+K++NREI+ R
Sbjct: 912 EEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLR 971
Query: 689 DRNRFHHFKDGNCSCNDYW 707
D NRFH FKDG CSC DYW
Sbjct: 972 DANRFHRFKDGICSCGDYW 990
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 153/614 (24%), Positives = 252/614 (41%), Gaps = 107/614 (17%)
Query: 50 HSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGHSLSS 109
H K GL +F L+ I FG + ++FE + + V+WN +++ +
Sbjct: 168 HGYACKIGLDGDEFVAGALVNI--YLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225
Query: 110 SPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHT 169
AI SG PN T L+ A+IS G +SD
Sbjct: 226 FKEEAIDLSSAFHSSGLNPNEIT----LRLLARIS---------------GDDSDAGQVK 266
Query: 170 SLINMYAQNGELESARLVFNKSSLRDAV---SYTALITGYASRGYLDDARQLFDEMPIRE 226
S N N + ++F L + + Y+AL+ +A + E
Sbjct: 267 SFAN---GNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFAD---------------MVE 308
Query: 227 ENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVK 286
+ ++ T + +L+ + SL LG V + GL L V+N+LI+MY K
Sbjct: 309 SDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGF 368
Query: 287 ARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAY 346
AR +F+++ +RD+ISWN +I G EA+ LF Q+L+ ++P+ T SVL A +
Sbjct: 369 ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS 428
Query: 347 L-GALDLGKWIHAYIDKNHQKLNNVS---LWTSLIDMYAKCGNIKAAEQVFDGMGYKTLA 402
L L L K +H + K+NNVS + T+LID Y++ +K AE +F+ + L
Sbjct: 429 LPEGLSLSKQVHVHA----IKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFD-LV 483
Query: 403 SWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAM 462
+WNAM++G K L LF+ M +G + DD T V C ++ G+Q
Sbjct: 484 AWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYA 543
Query: 463 IQD-YKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGR-- 519
I+ Y + L ++D+ + G A+ ++ + PD WT+++ C +G
Sbjct: 544 IKSGYDLD--LWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIENGEEE 600
Query: 520 ---------------------------------LELGESVAKHLLELEPEN-PGAYVLLS 545
LE G + + L+L N P L
Sbjct: 601 RAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLV 660
Query: 546 NMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLD 605
+MYA G DD + R+ M + +++ LVG H + K ++
Sbjct: 661 DMYAKCGSIDDAYCLFKRIE---MMNITAWNAM---------LVGLAQHGEGKETLQLFK 708
Query: 606 EIDALLEKSGFVPD 619
++ +L G PD
Sbjct: 709 QMKSL----GIKPD 718
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 213/484 (44%), Gaps = 54/484 (11%)
Query: 36 LLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQ 95
+L KCT H++I+ + +F ++ LI + S G L+YA VF+ + + +
Sbjct: 56 MLGKCT--------HARILTFEENPERFLINNLISM--YSKCGSLTYARRVFDKMPDRDL 105
Query: 96 VIWNNIIRGHSLSSSPVV---AIKFYVRMILSGFVPNT--YTFPFILKSCAKISAISEGK 150
V WN+I+ ++ SS VV F + IL V T T +LK C + +
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 151 QIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRG 210
H + K+GL+ D FV +L+N+Y + G+++ +++F + RD V + ++ Y G
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225
Query: 211 YLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHV 270
+ ++A L PNE T+ + + I G
Sbjct: 226 FKEEAIDL--SSAFHSSGLNPNEITLRLL-----------------ARISGDD------- 259
Query: 271 TNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNI 330
S G + + ++ ++I N + Y H+ Y L F M++S++
Sbjct: 260 --------SDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDV 311
Query: 331 EPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAE 390
E + VTF+ +L + +L LG+ +H K L +++ SLI+MY K A
Sbjct: 312 ECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDL-MLTVSNSLINMYCKLRKFGFAR 370
Query: 391 QVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAG 450
VFD M + L SWN++I+G+A +G +A+ LF +++ GL+PD T VL A +
Sbjct: 371 TVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLP 430
Query: 451 L-LDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTS 509
L + +Q I+ +S ++D R EAE L + D W +
Sbjct: 431 EGLSLSKQVHVHAIKINNVSDSFVSTA-LIDAYSRNRCMKEAEILFERHNF--DLVAWNA 487
Query: 510 LLGA 513
++
Sbjct: 488 MMAG 491
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 14/172 (8%)
Query: 350 LDLGKWIHAYI---DKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNA 406
L LGK HA I ++N ++ L +LI MY+KCG++ A +VFD M + L SWN+
Sbjct: 55 LMLGKCTHARILTFEENPERF----LINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNS 110
Query: 407 MISGLAMHGKA-----DKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNA 461
+++ A + +A LF + + + +T +L C H+G + + F+
Sbjct: 111 ILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV-WASESFHG 169
Query: 462 MIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGA 513
+ G +V++ + G E + L + M + D +W +L A
Sbjct: 170 YACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKA 220
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 501 bits (1289), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/633 (40%), Positives = 389/633 (61%), Gaps = 12/633 (1%)
Query: 83 ALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAK 142
A VF+ + E N V W +I P AI+F++ M+LSGF + +T + +CA+
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Query: 143 ISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQ---NGELESARLVFNKSSLRDAVSY 199
+ +S GKQ+H+ ++ GL D V SL++MYA+ +G ++ R VF++ +S+
Sbjct: 282 LENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 200 TALITGYASRGYL-DDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSL 258
TALITGY L +A LF EM I + + PN T + AC ++ +G V
Sbjct: 340 TALITGYMKNCNLATEAINLFSEM-ITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQ 398
Query: 259 IEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEA 318
GL SN V N++I M+ K + A+ FES+ +++++S+N + G ++++A
Sbjct: 399 AFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQA 458
Query: 319 LMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLID 378
L ++ + + + TF S+L A +G++ G+ IH+ + K N + +LI
Sbjct: 459 FKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQ-PVCNALIS 517
Query: 379 MYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDIT 438
MY+KCG+I A +VF+ M + + SW +MI+G A HG A + L F++MI EG++P+++T
Sbjct: 518 MYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVT 577
Query: 439 FVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTM 498
+V +LSAC+H GL+ G ++FN+M +D+KI PK++HY CMVDLL RAGL +A + TM
Sbjct: 578 YVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTM 637
Query: 499 EMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVA 558
+ D +W + LGACRVH ELG+ A+ +LEL+P P AY+ LSN+YA AG+W++
Sbjct: 638 PFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEEST 697
Query: 559 TIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVP 618
+R ++ ++ + K GCS IEVG +H+F VGD HP + IY+ LD + +++ G+VP
Sbjct: 698 EMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVP 757
Query: 619 DTSEVLYDMDEEWKEGA----LSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSAT 674
DT VL+ ++EE E L HSEK+A+A+GLIST +R+ KNLRVCG+CH+A
Sbjct: 758 DTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAM 817
Query: 675 KLISKIFNREIIARDRNRFHHFKDGNCSCNDYW 707
K IS + REI+ RD NRFHHFKDG CSCNDYW
Sbjct: 818 KYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 175/695 (25%), Positives = 311/695 (44%), Gaps = 73/695 (10%)
Query: 35 ALLSKCTNMQNI---KQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIR 91
+LL C ++ K VH+++I+ + + LI + S GD + A VFET+R
Sbjct: 67 SLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISL--YSKSGDSAKAEDVFETMR 124
Query: 92 ---EPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISE 148
+ + V W+ ++ + + + AIK +V + G VPN Y + ++++C+ +
Sbjct: 125 RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGV 184
Query: 149 GKQIHAHVLKLG-LESDPFVHTSLINMYAQ-NGELESARLVFNKSSLRDAVSYTALITGY 206
G+ ++K G ESD V SLI+M+ + E+A VF+K S + V++T +IT
Sbjct: 185 GRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244
Query: 207 ASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGS 266
G+ +A + F +M + F ++ T+ +V SACA + +L LG + S GL
Sbjct: 245 MQMGFPREAIRFFLDMVL--SGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD 302
Query: 267 NLHVTNALIDMYSKC---GDLVKARDLFESIEKRDVISWNVMIGGYTHTSDY-KEALMLF 322
++ + L+DMY+KC G + R +F+ +E V+SW +I GY + EA+ LF
Sbjct: 303 DVECS--LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLF 360
Query: 323 RQML-QSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYA 381
+M+ Q ++EPN TF S AC L +GK + K +N S+ S+I M+
Sbjct: 361 SEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLA-SNSSVANSVISMFV 419
Query: 382 KCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVG 441
K ++ A++ F+ + K L S+N + G + ++A L S + L TF
Sbjct: 420 KSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFAS 479
Query: 442 VLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMK 501
+LS + G + G Q + +++ +S ++ + + G D A + ME +
Sbjct: 480 LLSGVANVGSIRKGEQIHSQVVK-LGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR 538
Query: 502 PDAAIWTSLLGACRVHG-RLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATI 560
+ WTS++ HG + + E+ + + E N YV + + + G
Sbjct: 539 -NVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG-------- 589
Query: 561 RTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDT 620
L +G + + K+ P+ +H M+D LL ++G + D
Sbjct: 590 ---LVSEGWRH------------FNSMYEDHKIKPKMEHYACMVD----LLCRAGLLTDA 630
Query: 621 SEVLYDMDEE-----WKE--GALSHHSE----KLAIA--YGLISTKPGTTIRIVKNLRVC 667
E + M + W+ GA HS KLA L +P I++
Sbjct: 631 FEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACA 690
Query: 668 GNCHSATKLISKIFNREIIARDRNRFHHFKDGNCS 702
G +T++ K+ R ++ K+G CS
Sbjct: 691 GKWEESTEMRRKMKERNLV----------KEGGCS 715
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 140/515 (27%), Positives = 241/515 (46%), Gaps = 55/515 (10%)
Query: 121 MILSGFVP-NTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNG 179
M G P ++ TF +LKSC + GK +HA +++ +E D ++ SLI++Y+++G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 180 ELESARLVF---NKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTV 236
+ A VF + RD VS++A++ Y + G DA ++F E E VPN+
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFL--ELGLVPNDYCY 169
Query: 237 VTVLSACAHMGSLELGNWVCSLIEGHG-LGSNLHVTNALIDMYSKCGD-LVKARDLFESI 294
V+ AC++ + +G + G S++ V +LIDM+ K + A +F+ +
Sbjct: 170 TAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKM 229
Query: 295 EKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGK 354
+ +V++W +MI +EA+ F M+ S E + T SV ACA L L LGK
Sbjct: 230 SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGK 289
Query: 355 WIHAYIDKNHQKLNNVSLWTSLIDMYAKC---GNIKAAEQVFDGMGYKTLASWNAMISGL 411
+H++ ++ +++V SL+DMYAKC G++ +VFD M ++ SW A+I+G
Sbjct: 290 QLHSWAIRSGL-VDDVE--CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 346
Query: 412 AMHGK-ADKALSLFSRMIGEG-LQPDDITFVGVLSACNHAGLLDIGRQYF---------- 459
+ A +A++LFS MI +G ++P+ TF AC + +G+Q
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 406
Query: 460 -----NAMIQDYKISPKLQ---------------HYGCMVDLLGRAGLFDEAEALLKTM- 498
N++I + S +++ Y +D R F++A LL +
Sbjct: 407 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEIT 466
Query: 499 --EMKPDAAIWTSLLGACRVHGRLELGESVAKHLLE--LEPENPGAYVLLSNMYAGAGRW 554
E+ A + SLL G + GE + +++ L P L+S MY+ G
Sbjct: 467 ERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALIS-MYSKCGSI 525
Query: 555 DDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLV 589
D + + N + V +S+ G H F +
Sbjct: 526 DTASRV---FNFMENRNVISWTSMITGFAKHGFAI 557
Score = 115 bits (289), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 148/320 (46%), Gaps = 18/320 (5%)
Query: 202 LITGYASRGYLDDARQLFDEMPIREENFVPNES-TVVTVLSACAHMGSLELGNWVCSLIE 260
LI + + G L A D M + P +S T ++L +C LG V + +
Sbjct: 32 LILRHLNAGDLRGAVSALDLMA--RDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89
Query: 261 GHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIE---KRDVISWNVMIGGYTHTSDYKE 317
+ + + N+LI +YSK GD KA D+FE++ KRDV+SW+ M+ Y + +
Sbjct: 90 EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 318 ALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLI 377
A+ +F + L+ + PND + +V+ AC+ + +G+ ++ K ++V + SLI
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 378 DMYAKCGN-IKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDD 436
DM+ K N + A +VFD M + +W MI+ G +A+ F M+ G + D
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 437 ITFVGVLSACNHAGLLDIGRQYF-----NAMIQDYKISPKLQHYGCMVDLLGRAGLFDEA 491
T V SAC L +G+Q + ++ D + S + C D G D+
Sbjct: 270 FTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSAD-----GSVDDC 324
Query: 492 EALLKTMEMKPDAAIWTSLL 511
+ ME WT+L+
Sbjct: 325 RKVFDRME-DHSVMSWTALI 343
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 500 bits (1287), Expect = e-140, Method: Compositional matrix adjust.
Identities = 263/677 (38%), Positives = 396/677 (58%), Gaps = 45/677 (6%)
Query: 34 LALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREP 93
L+LL+ C N++ + Q+H IK G+ + KLI CA+S L YA + EP
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 68
Query: 94 NQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFV-PNTYTFPFILKSCAKISAISEGKQI 152
+ ++N ++RG+S S P ++ +V M+ GFV P++++F F++K+ ++ G Q+
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 128
Query: 153 HAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYL 212
H LK GLES FV T+LI MY G +E AR VF++ + V++ A+IT +
Sbjct: 129 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 188
Query: 213 DDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTN 272
AR++FD+M +R +W N
Sbjct: 189 AGAREIFDKMLVRNHT------------------------SW-----------------N 207
Query: 273 ALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEP 332
++ Y K G+L A+ +F + RD +SW+ MI G H + E+ + FR++ ++ + P
Sbjct: 208 VMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSP 267
Query: 333 NDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQV 392
N+V+ VL AC+ G+ + GK +H +++K VS+ +LIDMY++CGN+ A V
Sbjct: 268 NEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWI-VSVNNALIDMYSRCGNVPMARLV 326
Query: 393 FDGMGYK-TLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGL 451
F+GM K + SW +MI+GLAMHG+ ++A+ LF+ M G+ PD I+F+ +L AC+HAGL
Sbjct: 327 FEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGL 386
Query: 452 LDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLL 511
++ G YF+ M + Y I P+++HYGCMVDL GR+G +A + M + P A +W +LL
Sbjct: 387 IEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLL 446
Query: 512 GACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKK 571
GAC HG +EL E V + L EL+P N G VLLSN YA AG+W DVA+IR + + +KK
Sbjct: 447 GACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKK 506
Query: 572 VPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEID-ALLEKSGFVPDTSEVLYDMDEE 630
S +EVG +++F G+K +E L EI L +++G+ P+ + LYD++EE
Sbjct: 507 TTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEE 566
Query: 631 WKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDR 690
KE +S HSEKLA+A+ L G IRIVKNLR+C +CH+ KL SK++ EI+ RDR
Sbjct: 567 EKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDR 626
Query: 691 NRFHHFKDGNCSCNDYW 707
NRFH FKDG+CSC DYW
Sbjct: 627 NRFHSFKDGSCSCRDYW 643
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 499 bits (1285), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/683 (37%), Positives = 406/683 (59%), Gaps = 79/683 (11%)
Query: 31 QPSLALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICA-----VSPFGDLSYALL 85
P LALL C++ ++K +H +++T L + F S+L+ +C P L YA
Sbjct: 13 HPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYG 72
Query: 86 VFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISA 145
+F I+ PN ++N +IR S + P A FY +M+ S P+ TFPF++K+ +++
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 146 ISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITG 205
+ G+Q H+ +++ G ++D +V SL++MY
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMY------------------------------ 162
Query: 206 YASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLG 265
A+ G++ A ++F +M R+ VV+ W S++ G
Sbjct: 163 -ANCGFIAAAGRIFGQMGFRD---------VVS---------------WT-SMVAG---- 192
Query: 266 SNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQM 325
Y KCG + AR++F+ + R++ +W++MI GY + +++A+ LF M
Sbjct: 193 ------------YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFM 240
Query: 326 LQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGN 385
+ + N+ +SV+ +CA+LGAL+ G+ + Y+ K+H +N + L T+L+DM+ +CG+
Sbjct: 241 KREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLI-LGTALVDMFWRCGD 299
Query: 386 IKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSA 445
I+ A VF+G+ SW+++I GLA+HG A KA+ FS+MI G P D+TF VLSA
Sbjct: 300 IEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSA 359
Query: 446 CNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAA 505
C+H GL++ G + + M +D+ I P+L+HYGC+VD+LGRAG EAE + M +KP+A
Sbjct: 360 CSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAP 419
Query: 506 IWTSLLGACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLN 565
I +LLGAC+++ E+ E V L++++PE+ G YVLLSN+YA AG+WD + ++R +
Sbjct: 420 ILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMK 479
Query: 566 DKGMKKVPGCSSIEVGSVVHEFLVG-DKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVL 624
+K +KK PG S IE+ +++F +G D+ HP+ I +EI + G+ +T +
Sbjct: 480 EKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAF 539
Query: 625 YDMDEEWKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNRE 684
+D+DEE KE ++ HSEKLAIAYG++ TKPGTTIRIVKNLRVC +CH+ TKLIS+++ RE
Sbjct: 540 FDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRE 599
Query: 685 IIARDRNRFHHFKDGNCSCNDYW 707
+I RDRNRFHHF++G CSC DYW
Sbjct: 600 LIVRDRNRFHHFRNGVCSCRDYW 622
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 498 bits (1281), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/666 (38%), Positives = 396/666 (59%), Gaps = 17/666 (2%)
Query: 47 KQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGHS 106
+ +H Q + G + S ++++ F + A VF+ + E + ++WN +I G+
Sbjct: 139 RVIHGQAVVDGCDSELLLGSNIVKM--YFKFWRVEDARKVFDRMPEKDTILWNTMISGYR 196
Query: 107 LSSSPVVAIKFYVRMILSGFVP-NTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDP 165
+ V +I+ + +I +T T IL + A++ + G QIH+ K G S
Sbjct: 197 KNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD 256
Query: 166 FVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIR 225
+V T I++Y++ G+++ +F + D V+Y A+I GY S G + + LF E+ +
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 226 EENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNL----HVTNALIDMYSKC 281
ST+V+++ H+ + I G+ L SN V+ AL +YSK
Sbjct: 317 GARL--RSSTLVSLVPVSGHL-------MLIYAIHGYCLKSNFLSHASVSTALTTVYSKL 367
Query: 282 GDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVL 341
++ AR LF+ ++ + SWN MI GYT ++A+ LFR+M +S PN VT +L
Sbjct: 368 NEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCIL 427
Query: 342 PACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTL 401
ACA LGAL LGKW+H + + +++ + T+LI MYAKCG+I A ++FD M K
Sbjct: 428 SACAQLGALSLGKWVHDLVRSTDFE-SSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNE 486
Query: 402 ASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNA 461
+WN MISG +HG+ +AL++F M+ G+ P +TF+ VL AC+HAGL+ G + FN+
Sbjct: 487 VTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNS 546
Query: 462 MIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLE 521
MI Y P ++HY CMVD+LGRAG A ++ M ++P +++W +LLGACR+H
Sbjct: 547 MIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTN 606
Query: 522 LGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVG 581
L +V++ L EL+P+N G +VLLSN+++ + AT+R + + K PG + IE+G
Sbjct: 607 LARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIG 666
Query: 582 SVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSE 641
H F GD+ HPQ K IYE L++++ + ++G+ P+T L+D++EE +E + HSE
Sbjct: 667 ETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSE 726
Query: 642 KLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNC 701
+LAIA+GLI+T+PGT IRI+KNLRVC +CH+ TKLISKI R I+ RD NRFHHFKDG C
Sbjct: 727 RLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVC 786
Query: 702 SCNDYW 707
SC DYW
Sbjct: 787 SCGDYW 792
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/501 (27%), Positives = 255/501 (50%), Gaps = 10/501 (1%)
Query: 20 SSDPPYKLLQNQPSLALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGD 79
+++ L+ L + T++ ++ Q H+QII G N L+KL + +S G
Sbjct: 10 TAETTAALISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQ--RLSDLGA 67
Query: 80 LSYALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILS-GFVPNTYTFPFILK 138
+ YA +F +++ P+ ++N ++RG S++ SP ++ + + S PN+ T+ F +
Sbjct: 68 IYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAIS 127
Query: 139 SCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVS 198
+ + G+ IH + G +S+ + ++++ MY + +E AR VF++ +D +
Sbjct: 128 AASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTIL 187
Query: 199 YTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSL 258
+ +I+GY ++ Q+F ++ I E + +T++ +L A A + L LG + SL
Sbjct: 188 WNTMISGYRKNEMYVESIQVFRDL-INESCTRLDTTTLLDILPAVAELQELRLGMQIHSL 246
Query: 259 IEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEA 318
G S+ +V I +YSKCG + LF K D++++N MI GYT + + +
Sbjct: 247 ATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELS 306
Query: 319 LMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLID 378
L LF++++ S T +S++P G L L IH Y K++ L++ S+ T+L
Sbjct: 307 LSLFKELMLSGARLRSSTLVSLVPVS---GHLMLIYAIHGYCLKSN-FLSHASVSTALTT 362
Query: 379 MYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDIT 438
+Y+K I++A ++FD K+L SWNAMISG +G + A+SLF M P+ +T
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 422
Query: 439 FVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTM 498
+LSAC G L +G+ + + +++ + ++ + + G EA L M
Sbjct: 423 ITCILSACAQLGALSLGK-WVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM 481
Query: 499 EMKPDAAIWTSLLGACRVHGR 519
K + W +++ +HG+
Sbjct: 482 -TKKNEVTWNTMISGYGLHGQ 501
Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 203/476 (42%), Gaps = 45/476 (9%)
Query: 129 NTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVF 188
NTY F +S ++IS Q HA ++ G +D + T L + G + AR +F
Sbjct: 21 NTY-LDFFKRS----TSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIF 75
Query: 189 NKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGS 248
D + L+ G++ + +F + + + PN ST +SA +
Sbjct: 76 LSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLR-KSTDLKPNSSTYAFAISAASGFRD 134
Query: 249 LELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGG 308
G + G S L + + ++ MY K + AR +F+ + ++D I WN MI G
Sbjct: 135 DRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISG 194
Query: 309 YTHTSDYKEALMLFRQML-QSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKL 367
Y Y E++ +FR ++ +S + T L +LPA A L L LG IH+ K
Sbjct: 195 YRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYS 254
Query: 368 NNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRM 427
++ L T I +Y+KCG IK +F + ++NAMI G +G+ + +LSLF +
Sbjct: 255 HDYVL-TGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKEL 313
Query: 428 IGEGLQPDDITFVGVLSACNHAGLLDIGRQY----------------------FNAMIQD 465
+ G + T V ++ H L+ Y N +
Sbjct: 314 MLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESA 373
Query: 466 YKI---SPK--LQHYGCMVDLLGRAGLFDEAEALLKTM---EMKPDAAIWTSLLGACRVH 517
K+ SP+ L + M+ + GL ++A +L + M E P+ T +L AC
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQL 433
Query: 518 GRLELGESVAKHLLELEPENPGAYV--LLSNMYAGAGRWDDVATIRTRLNDKGMKK 571
G L LG+ V + + E+ YV L MYA G +A R RL D KK
Sbjct: 434 GALSLGKWVHDLVRSTDFES-SIYVSTALIGMYAKCG---SIAEAR-RLFDLMTKK 484
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 496 bits (1278), Expect = e-139, Method: Compositional matrix adjust.
Identities = 258/621 (41%), Positives = 379/621 (61%), Gaps = 37/621 (5%)
Query: 18 PPSSDPPYKLLQNQPSLALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPF 77
P + + + + + P L+LL KC + ++KQ+ +Q+I GL FA S+LI CA+S
Sbjct: 41 PINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSES 100
Query: 78 GDLSYALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFV---PNTYTFP 134
L Y++ + + I PN WN IRG S S +P + Y +M+ G P+ +T+P
Sbjct: 101 RYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYP 160
Query: 135 FILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLR 194
+ K CA + S G I HVLKL LE VH + I+M+A G++E+AR VF++S +R
Sbjct: 161 VLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVR 220
Query: 195 DAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNW 254
D VS+ LI GY G + A ++ M E P++ T++ ++S+C+ +G L G
Sbjct: 221 DLVSWNCLINGYKKIGEAEKAIYVYKLM--ESEGVKPDDVTMIGLVSSCSMLGDLNRGKE 278
Query: 255 VCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKR----------------- 297
++ +GL + + NAL+DM+SKCGD+ +AR +F+++EKR
Sbjct: 279 FYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGL 338
Query: 298 --------------DVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPA 343
DV+ WN MIGG ++AL LF++M SN +P+++T + L A
Sbjct: 339 LDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSA 398
Query: 344 CAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLAS 403
C+ LGALD+G WIH YI+K LN V+L TSL+DMYAKCGNI A VF G+ + +
Sbjct: 399 CSQLGALDVGIWIHRYIEKYSLSLN-VALGTSLVDMYAKCGNISEALSVFHGIQTRNSLT 457
Query: 404 WNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMI 463
+ A+I GLA+HG A A+S F+ MI G+ PD+ITF+G+LSAC H G++ GR YF+ M
Sbjct: 458 YTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMK 517
Query: 464 QDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELG 523
+ ++P+L+HY MVDLLGRAGL +EA+ L+++M M+ DAA+W +LL CR+HG +ELG
Sbjct: 518 SRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELG 577
Query: 524 ESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSV 583
E AK LLEL+P + G YVLL MY A W+D R +N++G++K+PGCSSIEV +
Sbjct: 578 EKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGI 637
Query: 584 VHEFLVGDKVHPQSKHIYEML 604
V EF+V DK P+S+ IY+ L
Sbjct: 638 VCEFIVRDKSRPESEKIYDRL 658
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 496 bits (1278), Expect = e-139, Method: Compositional matrix adjust.
Identities = 257/628 (40%), Positives = 382/628 (60%), Gaps = 61/628 (9%)
Query: 133 FPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNG----ELESARLVF 188
FP I +C I +S QIHA +K G D ++ A + +L+ A +F
Sbjct: 27 FPQI-NNCRTIRDLS---QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIF 82
Query: 189 NKSSLRDAVSYTALITGYASRGYLDD----ARQLFDEMPIREENFVPNESTVVTVLSACA 244
N+ R+ S+ +I G++ +D A LF EM + +E PN T +VL ACA
Sbjct: 83 NQMPQRNCFSWNTIIRGFSESD--EDKALIAITLFYEM-MSDEFVEPNRFTFPSVLKACA 139
Query: 245 HMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCG---------------------- 282
G ++ G + L +G G + V + L+ MY CG
Sbjct: 140 KTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMT 199
Query: 283 -----------------------DLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEAL 319
D AR LF+ + +R V+SWN MI GY+ +K+A+
Sbjct: 200 DRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAV 259
Query: 320 MLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDM 379
+FR+M + +I PN VT +SVLPA + LG+L+LG+W+H Y + + ++++V L ++LIDM
Sbjct: 260 EVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV-LGSALIDM 318
Query: 380 YAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITF 439
Y+KCG I+ A VF+ + + + +W+AMI+G A+HG+A A+ F +M G++P D+ +
Sbjct: 319 YSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAY 378
Query: 440 VGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTME 499
+ +L+AC+H GL++ GR+YF+ M+ + P+++HYGCMVDLLGR+GL DEAE + M
Sbjct: 379 INLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMP 438
Query: 500 MKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVAT 559
+KPD IW +LLGACR+ G +E+G+ VA L+++ P + GAYV LSNMYA G W +V+
Sbjct: 439 IKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSE 498
Query: 560 IRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPD 619
+R R+ +K ++K PGCS I++ V+HEF+V D HP++K I ML EI L +G+ P
Sbjct: 499 MRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPI 558
Query: 620 TSEVLYDMDEEWKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLISK 679
T++VL +++EE KE L +HSEK+A A+GLIST PG IRIVKNLR+C +CHS+ KLISK
Sbjct: 559 TTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISK 618
Query: 680 IFNREIIARDRNRFHHFKDGNCSCNDYW 707
++ R+I RDR RFHHF+DG+CSC DYW
Sbjct: 619 VYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 232/477 (48%), Gaps = 86/477 (18%)
Query: 37 LSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPF--GDLSYALLVFETIREPN 94
++ C ++++ Q+H+ IK+G A ++++ CA S DL YA +F + + N
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89
Query: 95 QVIWNNIIRGHSLSSS--PVVAIKFYVRMILSGFV-PNTYTFPFILKSCAKISAISEGKQ 151
WN IIRG S S ++AI + M+ FV PN +TFP +LK+CAK I EGKQ
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 152 IHAHVLKLGLESDPFVHTSLINMYA-----------------------------QNGEL- 181
IH LK G D FV ++L+ MY ++GE+
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 182 ---------------ESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIRE 226
++AR++F+K R VS+ +I+GY+ G+ DA ++F EM ++
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM--KK 267
Query: 227 ENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVK 286
+ PN T+V+VL A + +GSLELG W+ E G+ + + +ALIDMYSKCG + K
Sbjct: 268 GDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEK 327
Query: 287 ARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAY 346
A +FE + + +VI+W+ MI G+ +A+ F +M Q+ + P+DV ++++L AC++
Sbjct: 328 AIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSH 387
Query: 347 LGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNA 406
G ++ G+ + + + + ++D+ + G + AE+ M K
Sbjct: 388 GGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIK------- 440
Query: 407 MISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMI 463
PDD+ + +L AC G +++G++ N ++
Sbjct: 441 ---------------------------PDDVIWKALLGACRMQGNVEMGKRVANILM 470
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 496 bits (1277), Expect = e-139, Method: Compositional matrix adjust.
Identities = 254/661 (38%), Positives = 393/661 (59%), Gaps = 6/661 (0%)
Query: 47 KQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGHS 106
K++H ++K+G FA++ L + A ++ A VF+ + E + V WN I+ G+S
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCR--QVNEARKVFDRMPERDLVSWNTIVAGYS 212
Query: 107 LSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPF 166
+ +A++ M P+ T +L + + + IS GK+IH + ++ G +S
Sbjct: 213 QNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVN 272
Query: 167 VHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIRE 226
+ T+L++MYA+ G LE+AR +F+ R+ VS+ ++I Y +A +F +M +
Sbjct: 273 ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM--LD 330
Query: 227 ENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVK 286
E P + +V+ L ACA +G LE G ++ L GL N+ V N+LI MY KC ++
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDT 390
Query: 287 ARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAY 346
A +F ++ R ++SWN MI G+ +AL F QM ++P+ T++SV+ A A
Sbjct: 391 AASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAE 450
Query: 347 LGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNA 406
L KWIH + ++ NV + T+L+DMYAKCG I A +FD M + + +WNA
Sbjct: 451 LSITHHAKWIHGVVMRSCLD-KNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNA 509
Query: 407 MISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDY 466
MI G HG AL LF M ++P+ +TF+ V+SAC+H+GL++ G + F M ++Y
Sbjct: 510 MIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENY 569
Query: 467 KISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESV 526
I + HYG MVDLLGRAG +EA + M +KP ++ ++LGAC++H + E
Sbjct: 570 SIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKA 629
Query: 527 AKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHE 586
A+ L EL P++ G +VLL+N+Y A W+ V +R + +G++K PGCS +E+ + VH
Sbjct: 630 AERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHS 689
Query: 587 FLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIA 646
F G HP SK IY L+++ ++++G+VPDT+ VL ++ + KE LS HSEKLAI+
Sbjct: 690 FFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAIS 748
Query: 647 YGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCNDY 706
+GL++T GTTI + KNLRVC +CH+ATK IS + REI+ RD RFHHFK+G CSC DY
Sbjct: 749 FGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDY 808
Query: 707 W 707
W
Sbjct: 809 W 809
Score = 276 bits (705), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 177/577 (30%), Positives = 291/577 (50%), Gaps = 70/577 (12%)
Query: 31 QPSLALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETI 90
P+ LL +C++++ ++Q+ + K GL+ F +KL+ + +G + A VFE I
Sbjct: 38 HPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSL--FCRYGSVDEAARVFEPI 95
Query: 91 REPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGK 150
V+++ +++G + S A++F+VRM P Y F ++LK C + + GK
Sbjct: 96 DSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGK 155
Query: 151 QIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRG 210
+IH ++K G D F T L NMYA+ ++ AR VF++ RD VS+ ++ GY+ G
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNG 215
Query: 211 YLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHV 270
A ++ M EEN P+ T+V+VL A + + + +G + G S +++
Sbjct: 216 MARMALEMVKSMC--EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 273
Query: 271 TNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNI 330
+ AL+DMY+KCG L AR LF+ + +R+V+SWN MI Y + KEA+++F++ML +
Sbjct: 274 STALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV 333
Query: 331 EPNDVTFLSVLPACAYLGALDLGKWIHAY-----IDKNHQKLNNVSLWTSLIDMYAKCGN 385
+P DV+ + L ACA LG L+ G++IH +D+ NVS+ SLI MY KC
Sbjct: 334 KPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR------NVSVVNSLISMYCKCKE 387
Query: 386 IKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSA 445
+ A +F + +TL SWNAMI G A +G+ AL+ FS+M ++PD T+V V++A
Sbjct: 388 VDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447
Query: 446 ------CNHA-----------------------------GLLDIGRQYFNAMIQDYKISP 470
+HA G + I R F+ M + + +
Sbjct: 448 IAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTT- 506
Query: 471 KLQHYGCMVDLLGRAGLFDEAEALLKTME---MKPDAAIWTSLLGACRVHGRLELGESV- 526
+ M+D G G A L + M+ +KP+ + S++ AC G +E G
Sbjct: 507 ----WNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF 562
Query: 527 ----AKHLLELEPENPGAYVLLSNMYAGAGR----WD 555
+ +EL ++ GA V ++ AGR WD
Sbjct: 563 YMMKENYSIELSMDHYGAMV---DLLGRAGRLNEAWD 596
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 496 bits (1276), Expect = e-139, Method: Compositional matrix adjust.
Identities = 240/572 (41%), Positives = 371/572 (64%), Gaps = 4/572 (0%)
Query: 136 ILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRD 195
+LK C + +G+ +HAH+L+ D + +L+NMYA+ G LE AR VF K RD
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125
Query: 196 AVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWV 255
V++T LI+GY+ DA F++M + PNE T+ +V+ A A G+ +
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQM--LRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 256 CSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDY 315
G SN+HV +AL+D+Y++ G + A+ +F+++E R+ +SWN +I G+ S
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243
Query: 316 KEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTS 375
++AL LF+ ML+ P+ ++ S+ AC+ G L+ GKW+HAY+ K+ +KL + +
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA-GNT 302
Query: 376 LIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPD 435
L+DMYAK G+I A ++FD + + + SWN++++ A HG +A+ F M G++P+
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 436 DITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALL 495
+I+F+ VL+AC+H+GLLD G Y+ M +D I P+ HY +VDLLGRAG + A +
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 496 KTMEMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWD 555
+ M ++P AAIW +LL ACR+H ELG A+H+ EL+P++PG +V+L N+YA GRW+
Sbjct: 422 EEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWN 481
Query: 556 DVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSG 615
D A +R ++ + G+KK P CS +E+ + +H F+ D+ HPQ + I +E+ A +++ G
Sbjct: 482 DAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELG 541
Query: 616 FVPDTSEVLYDMDEEWKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATK 675
+VPDTS V+ +D++ +E L +HSEK+A+A+ L++T PG+TI I KN+RVCG+CH+A K
Sbjct: 542 YVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIK 601
Query: 676 LISKIFNREIIARDRNRFHHFKDGNCSCNDYW 707
L SK+ REII RD NRFHHFKDGNCSC DYW
Sbjct: 602 LASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 222/440 (50%), Gaps = 15/440 (3%)
Query: 1 MALPPSSLTLSPSILHFPPSSDPPYKLLQNQPSLALLSKCTNMQNIKQ---VHSQIIKTG 57
+ P + L L S S P + N LL KCT + + Q VH+ I+++
Sbjct: 35 LKFPSNDLLLRTSSNDLEGSYIPADRRFYN----TLLKKCTVFKLLIQGRIVHAHILQSI 90
Query: 58 LHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKF 117
+ + L+ + A G L A VFE + + + V W +I G+S P A+ F
Sbjct: 91 FRHDIVMGNTLLNMYAKC--GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLF 148
Query: 118 YVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQ 177
+ +M+ G+ PN +T ++K+ A G Q+H +K G +S+ V ++L+++Y +
Sbjct: 149 FNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR 208
Query: 178 NGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVV 237
G ++ A+LVF+ R+ VS+ ALI G+A R + A +LF M + F P+ +
Sbjct: 209 YGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGM--LRDGFRPSHFSYA 266
Query: 238 TVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKR 297
++ AC+ G LE G WV + + G N L+DMY+K G + AR +F+ + KR
Sbjct: 267 SLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR 326
Query: 298 DVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIH 357
DV+SWN ++ Y KEA+ F +M + I PN+++FLSVL AC++ G LD G W +
Sbjct: 327 DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG-WHY 385
Query: 358 AYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYK-TLASWNAMISGLAMHGK 416
+ K + + +++D+ + G++ A + + M + T A W A+++ MH
Sbjct: 386 YELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKN 445
Query: 417 ADKALSLFSRMIGEGLQPDD 436
+ L ++ L PDD
Sbjct: 446 TE--LGAYAAEHVFELDPDD 463
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 495 bits (1275), Expect = e-139, Method: Compositional matrix adjust.
Identities = 263/584 (45%), Positives = 368/584 (63%), Gaps = 24/584 (4%)
Query: 144 SAISEGKQIHAHVLKLGLESDP---FVHTSLINMYAQNGELESARLVFNKSSLRDAVSYT 200
S +S+ KQ+HA L+ +P F++ ++ + + ++ A VF+ + +
Sbjct: 59 SDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWN 118
Query: 201 ALITGYA---SRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCS 257
LI A SR ++A L+ +M R E+ P++ T VL ACA++ G V
Sbjct: 119 TLIRACAHDVSRK--EEAFMLYRKMLERGES-SPDKHTFPFVLKACAYIFGFSEGKQVHC 175
Query: 258 LIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKE 317
I HG G +++V N LI +Y CG L AR +F+ + +R ++SWN MI +Y
Sbjct: 176 QIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDS 235
Query: 318 ALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDK--NHQKLNNVSLWTS 375
AL LFR+M Q + EP+ T SVL ACA LG+L LG W HA++ + + +V + S
Sbjct: 236 ALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNS 294
Query: 376 LIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIG--EGLQ 433
LI+MY KCG+++ AEQVF GM + LASWNAMI G A HG+A++A++ F RM+ E ++
Sbjct: 295 LIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVR 354
Query: 434 PDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEA 493
P+ +TFVG+L ACNH G ++ GRQYF+ M++DY I P L+HYGC+VDL+ RAG EA
Sbjct: 355 PNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAID 414
Query: 494 LLKTMEMKPDAAIWTSLLGACRVHG-RLELGESVAKHLLELEPEN-------PGAYVLLS 545
++ +M MKPDA IW SLL AC G +EL E +A++++ + +N GAYVLLS
Sbjct: 415 MVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLS 474
Query: 546 NMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLD 605
+YA A RW+DV +R +++ G++K PGCSSIE+ + HEF GD HPQ+K IY+ L
Sbjct: 475 RVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLK 534
Query: 606 EIDALLEKSGFVPDTSEV-LYD-MDEEWKEGALSHHSEKLAIAYGLISTKPGTTIRIVKN 663
ID L G++PD S+ L D ++ KE +L HSE+LAIA+GLI+ P T IRI KN
Sbjct: 535 VIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKN 594
Query: 664 LRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCNDYW 707
LRVC +CH TKLISK+FN EII RDR RFHHFKDG+CSC DYW
Sbjct: 595 LRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/438 (32%), Positives = 231/438 (52%), Gaps = 30/438 (6%)
Query: 4 PPSSLT----------LSPSILHFPPSSDPPYKLLQN--QPSLALLSKCTNMQNIKQVHS 51
PP+++T + P H PP+S P N Q +L C++M +KQ+H+
Sbjct: 10 PPTTITYYHPMSIGLLVHPLSPHIPPASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHA 69
Query: 52 QIIKTGLHN---TQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRG--HS 106
++T T F K++++ S F D++YA VF++I + +WN +IR H
Sbjct: 70 FTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHD 127
Query: 107 LSSSPVVAIKFYVRMILSG-FVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDP 165
+S A Y +M+ G P+ +TFPF+LK+CA I SEGKQ+H ++K G D
Sbjct: 128 VSRKEE-AFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDV 186
Query: 166 FVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIR 225
+V+ LI++Y G L+ AR VF++ R VS+ ++I G D A QLF EM
Sbjct: 187 YVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM--- 243
Query: 226 EENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGH---GLGSNLHVTNALIDMYSKCG 282
+ +F P+ T+ +VLSACA +GSL LG W + + + ++ V N+LI+MY KCG
Sbjct: 244 QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCG 303
Query: 283 DLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQML--QSNIEPNDVTFLSV 340
L A +F+ ++KRD+ SWN MI G+ +EA+ F +M+ + N+ PN VTF+ +
Sbjct: 304 SLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGL 363
Query: 341 LPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKT 400
L AC + G ++ G+ + +++ + + ++D+ A+ G I A + M K
Sbjct: 364 LIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKP 423
Query: 401 LAS-WNAMISGLAMHGKA 417
A W +++ G +
Sbjct: 424 DAVIWRSLLDACCKKGAS 441
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 494 bits (1273), Expect = e-139, Method: Compositional matrix adjust.
Identities = 257/602 (42%), Positives = 378/602 (62%), Gaps = 43/602 (7%)
Query: 142 KISAISEGKQIHAHVLKLGL---ESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVS 198
K ++ E QIHA +L+ L P ++ L YA +G++ + +F+++ D
Sbjct: 38 KSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFL 97
Query: 199 YTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSL 258
+TA I + G D A L+ ++ E N PNE T ++L +C S + G + +
Sbjct: 98 FTAAINTASINGLKDQAFLLYVQLLSSEIN--PNEFTFSSLLKSC----STKSGKLIHTH 151
Query: 259 IEGHGLGSNLHVTNALIDMYSKCGDLVKA------------------------------- 287
+ GLG + +V L+D+Y+K GD+V A
Sbjct: 152 VLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAA 211
Query: 288 RDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQML-QSNIEPNDVTFLSVLPACAY 346
R LF+S+ +RD++SWNVMI GY +ALMLF+++L + +P+++T ++ L AC+
Sbjct: 212 RALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQ 271
Query: 347 LGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNA 406
+GAL+ G+WIH ++ + +LN V + T LIDMY+KCG+++ A VF+ K + +WNA
Sbjct: 272 IGALETGRWIHVFVKSSRIRLN-VKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNA 330
Query: 407 MISGLAMHGKADKALSLFSRMIG-EGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQD 465
MI+G AMHG + AL LF+ M G GLQP DITF+G L AC HAGL++ G + F +M Q+
Sbjct: 331 MIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQE 390
Query: 466 YKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGES 525
Y I PK++HYGC+V LLGRAG A +K M M D+ +W+S+LG+C++HG LG+
Sbjct: 391 YGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKE 450
Query: 526 VAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVH 585
+A++L+ L +N G YVLLSN+YA G ++ VA +R + +KG+ K PG S+IE+ + VH
Sbjct: 451 IAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVH 510
Query: 586 EFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAI 645
EF GD+ H +SK IY ML +I ++ G+VP+T+ VL D++E KE +L HSE+LAI
Sbjct: 511 EFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAI 570
Query: 646 AYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCND 705
AYGLISTKPG+ ++I KNLRVC +CH+ TKLISKI R+I+ RDRNRFHHF DG+CSC D
Sbjct: 571 AYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGD 630
Query: 706 YW 707
+W
Sbjct: 631 FW 632
Score = 209 bits (531), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 225/447 (50%), Gaps = 46/447 (10%)
Query: 2 ALPPSSLTLSPSILHFPPSSDPPYKLLQNQPSLALLSKCTNMQNIKQVHSQIIKTGLH-N 60
+LP + L+ + + P PP KL L+ K ++ + Q+H+ I++ L +
Sbjct: 10 SLPQNQLSTTATARFRLP---PPEKLA------VLIDKSQSVDEVLQIHAAILRHNLLLH 60
Query: 61 TQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVR 120
++ + L A + G + ++L +F +P+ ++ I S++ A YV+
Sbjct: 61 PRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQ 120
Query: 121 MILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGE 180
++ S PN +TF +LKSC+ S GK IH HVLK GL DP+V T L+++YA+ G+
Sbjct: 121 LLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGD 176
Query: 181 LESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIR--------------- 225
+ SA+ VF++ R VS TA+IT YA +G ++ AR LFD M R
Sbjct: 177 VVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQH 236
Query: 226 ---------------EENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHV 270
E P+E TVV LSAC+ +G+LE G W+ ++ + N+ V
Sbjct: 237 GFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKV 296
Query: 271 TNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQ-SN 329
LIDMYSKCG L +A +F ++D+++WN MI GY ++AL LF +M +
Sbjct: 297 CTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITG 356
Query: 330 IEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAA 389
++P D+TF+ L ACA+ G ++ G I + + + + + L+ + + G +K A
Sbjct: 357 LQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRA 416
Query: 390 EQVFDGMGYKTLAS-WNAMISGLAMHG 415
+ M + W++++ +HG
Sbjct: 417 YETIKNMNMDADSVLWSSVLGSCKLHG 443
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 494 bits (1271), Expect = e-138, Method: Compositional matrix adjust.
Identities = 260/677 (38%), Positives = 392/677 (57%), Gaps = 9/677 (1%)
Query: 36 LLSKCTNM--QN-IKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIRE 92
LL C + QN + QVH+ +K G F + + + L A ++FE I E
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 93 PNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQI 152
+ V +N +I G+ +I +++M SG P+ +TF +LK+ + + G+Q+
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 153 HAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYL 212
HA + G D V +++ Y+++ + R++F++ D VSY +I+ Y+
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332
Query: 213 DDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWV-CSLIEGHGLGSNLHVT 271
+ + F EM F T+LS A++ SL++G + C + S LHV
Sbjct: 333 EASLHFFREMQCM--GFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATA-DSILHVG 389
Query: 272 NALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIE 331
N+L+DMY+KC +A +F+S+ +R +SW +I GY + L LF +M SN+
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLR 449
Query: 332 PNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQ 391
+ TF +VL A A +L LGK +HA+I ++ L NV + L+DMYAKCG+IK A Q
Sbjct: 450 ADQSTFATVLKASASFASLLLGKQLHAFIIRS-GNLENVFSGSGLVDMYAKCGSIKDAVQ 508
Query: 392 VFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGL 451
VF+ M + SWNA+IS A +G + A+ F++MI GLQPD ++ +GVL+AC+H G
Sbjct: 509 VFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGF 568
Query: 452 LDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLL 511
++ G +YF AM Y I+PK +HY CM+DLLGR G F EAE L+ M +PD +W+S+L
Sbjct: 569 VEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 628
Query: 512 GACRVHGRLELGESVAKHLLELEP-ENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMK 570
ACR+H L E A+ L +E + AYV +SN+YA AG W+ V ++ + ++G+K
Sbjct: 629 NACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIK 688
Query: 571 KVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEE 630
KVP S +EV +H F D+ HP I ++E+ A +E+ G+ PDTS V+ D+DE+
Sbjct: 689 KVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQ 748
Query: 631 WKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDR 690
K +L +HSE+LA+A+ LIST G I ++KNLR C +CH+A KLISKI REI RD
Sbjct: 749 MKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDT 808
Query: 691 NRFHHFKDGNCSCNDYW 707
+RFHHF +G CSC DYW
Sbjct: 809 SRFHHFSEGVCSCGDYW 825
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 229/470 (48%), Gaps = 19/470 (4%)
Query: 78 GDLSYALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSG--FVPNTYTFPF 135
GD+S A +F+ + + V W ++ ++ +S A K + +M S +P+ TF
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 136 ILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTS--LINMYAQNGELESARLVFNKSSL 193
+L C + Q+HA +KLG +++PF+ S L+ Y + L+ A ++F +
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 194 RDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGN 253
+D+V++ LITGY G ++ LF + +R+ P++ T VL A + LG
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLF--LKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQ 270
Query: 254 WVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTS 313
+ +L G + V N ++D YSK +++ R LF+ + + D +S+NV+I Y+
Sbjct: 271 QLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQAD 330
Query: 314 DYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIH--AYIDKNHQKLNNVS 371
Y+ +L FR+M + + F ++L A L +L +G+ +H A + L+
Sbjct: 331 QYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILH--- 387
Query: 372 LWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEG 431
+ SL+DMYAKC + AE +F + +T SW A+ISG G L LF++M G
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 432 LQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEA 491
L+ D TF VL A L +G+Q +I+ + G +VD+ + G +A
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGSIKDA 506
Query: 492 EALLKTMEMKPD--AAIWTSLLGACRVHGRLELGESVAKHLLE--LEPEN 537
++ E PD A W +L+ A +G E ++E L+P++
Sbjct: 507 ---VQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDS 553
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 188/396 (47%), Gaps = 13/396 (3%)
Query: 120 RMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNG 179
R+I +GF +T FI++ + +S ++++ + S ++I+ + + G
Sbjct: 38 RIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVST----NTMISGHVKTG 93
Query: 180 ELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTV 239
++ SAR +F+ R V++T L+ YA + D+A +LF +M +P+ T T+
Sbjct: 94 DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTL 153
Query: 240 LSACAHMGSLELGNWVCSLIEGHGLGSN--LHVTNALIDMYSKCGDLVKARDLFESIEKR 297
L C V + G +N L V+N L+ Y + L A LFE I ++
Sbjct: 154 LPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK 213
Query: 298 DVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIH 357
D +++N +I GY Y E++ LF +M QS +P+D TF VL A L LG+ +H
Sbjct: 214 DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLH 273
Query: 358 AYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKA 417
A + + S+ ++D Y+K + +FD M S+N +IS + +
Sbjct: 274 A-LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332
Query: 418 DKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQ-YFNAMIQDYKISPKLQHYG 476
+ +L F M G + F +LS + L +GRQ + A++ + + H G
Sbjct: 333 EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALL---ATADSILHVG 389
Query: 477 -CMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLL 511
+VD+ + +F+EAE + K++ + + WT+L+
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVS-WTALI 424
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 274/702 (39%), Positives = 408/702 (58%), Gaps = 26/702 (3%)
Query: 13 SILHFPPSSDPPYKLLQNQPSLALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEIC 72
S+ P Y+ PS+ L C + + ++H +K G + + LI +
Sbjct: 141 SLFMLSSGLTPDYRTF---PSV--LKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHL- 194
Query: 73 AVSPFGDLSYALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGF-VPNTY 131
S + + A ++F+ + + WN +I G+ S + A+ + +G ++
Sbjct: 195 -YSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRAMDSV 248
Query: 132 TFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKS 191
T +L +C + + G IH++ +K GLES+ FV LI++YA+ G L + VF++
Sbjct: 249 TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM 308
Query: 192 SLRDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLEL 251
+RD +S+ ++I Y A LF EM R P+ T++++ S + +G +
Sbjct: 309 YVRDLISWNSIIKAYELNEQPLRAISLFQEM--RLSRIQPDCLTLISLASILSQLGDIR- 365
Query: 252 GNWVCSLIEGHGLGS-----NLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMI 306
C ++G L ++ + NA++ MY+K G + AR +F + DVISWN +I
Sbjct: 366 ---ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTII 422
Query: 307 GGYTHTSDYKEALMLFRQMLQS-NIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQ 365
GY EA+ ++ M + I N T++SVLPAC+ GAL G +H + KN
Sbjct: 423 SGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGL 482
Query: 366 KLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFS 425
L+ V + TSL DMY KCG ++ A +F + WN +I+ HG +KA+ LF
Sbjct: 483 YLD-VFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFK 541
Query: 426 RMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRA 485
M+ EG++PD ITFV +LSAC+H+GL+D G+ F M DY I+P L+HYGCMVD+ GRA
Sbjct: 542 EMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRA 601
Query: 486 GLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPENPGAYVLLS 545
G + A +K+M ++PDA+IW +LL ACRVHG ++LG+ ++HL E+EPE+ G +VLLS
Sbjct: 602 GQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLS 661
Query: 546 NMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLD 605
NMYA AG+W+ V IR+ + KG++K PG SS+EV + V F G++ HP + +Y L
Sbjct: 662 NMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELT 721
Query: 606 EIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNLR 665
+ A L+ G+VPD VL D++++ KE L HSE+LAIA+ LI+T TTIRI KNLR
Sbjct: 722 ALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLR 781
Query: 666 VCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCNDYW 707
VCG+CHS TK ISKI REII RD NRFHHFK+G CSC DYW
Sbjct: 782 VCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 149/519 (28%), Positives = 268/519 (51%), Gaps = 27/519 (5%)
Query: 36 LLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQ 95
L CTN+Q+ K +H++++ + +KL+ + G+++ A F+ I+ +
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNL--YCYLGNVALARHTFDHIQNRDV 117
Query: 96 VIWNNIIRGHSLSSSPVVAIK-FYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHA 154
WN +I G+ + + I+ F + M+ SG P+ TFP +LK+C + +G +IH
Sbjct: 118 YAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHC 174
Query: 155 HVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDD 214
LK G D +V SLI++Y++ + +AR++F++ +RD S+ A+I+GY G +
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKE 234
Query: 215 ARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTNAL 274
A L + + + TVV++LSAC G G + S HGL S L V+N L
Sbjct: 235 ALTLSNGLR------AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKL 288
Query: 275 IDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPND 334
ID+Y++ G L + +F+ + RD+ISWN +I Y A+ LF++M S I+P+
Sbjct: 289 IDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC 348
Query: 335 VTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFD 394
+T +S+ + LG + + + + + L ++++ +++ MYAK G + +A VF+
Sbjct: 349 LTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFN 408
Query: 395 GMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEG-LQPDDITFVGVLSACNHAGLLD 453
+ + SWN +ISG A +G A +A+ +++ M EG + + T+V VL AC+ AG L
Sbjct: 409 WLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALR 468
Query: 454 I-----GRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWT 508
GR N + D + L D+ G+ G ++A +L + + ++ W
Sbjct: 469 QGMKLHGRLLKNGLYLDVFVVTSL------ADMYGKCGRLEDALSLFYQIP-RVNSVPWN 521
Query: 509 SLLGACRVHGRLELGESVAKHLLE--LEPENPGAYVLLS 545
+L+ HG E + K +L+ ++P++ LLS
Sbjct: 522 TLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 203/464 (43%), Gaps = 71/464 (15%)
Query: 146 ISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITG 205
+ K +HA ++ + + L+N+Y G + AR F+ RD ++ +I+G
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 206 YASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLG 265
Y G + + F + + P+ T +VL AC ++ GN + L G
Sbjct: 127 YGRAGNSSEVIRCF-SLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFM 182
Query: 266 SNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALML---F 322
+++V +LI +YS+ + AR LF+ + RD+ SWN MI GY + + KEAL L
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242
Query: 323 RQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAK 382
R M + VT +S+L AC G + G IH+Y K H + + + LID+YA+
Sbjct: 243 RAM-------DSVTVVSLLSACTEAGDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYAE 294
Query: 383 CGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFV-- 440
G ++ ++VFD M + L SWN++I ++ + +A+SLF M +QPD +T +
Sbjct: 295 FGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISL 354
Query: 441 -------GVLSACNHA---------------------------GLLDIGRQYFNAMIQDY 466
G + AC GL+D R FN +
Sbjct: 355 ASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTD 414
Query: 467 KISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAA----IWTSLLGACRVHGRLEL 522
IS + ++ + G EA + ME + + A W S+L AC G L
Sbjct: 415 VIS-----WNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469
Query: 523 GESVAKHLLELEPENPGAYV------LLSNMYAGAGRWDDVATI 560
G + LL+ G Y+ L++MY GR +D ++
Sbjct: 470 GMKLHGRLLK-----NGLYLDVFVVTSLADMYGKCGRLEDALSL 508
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 171/372 (45%), Gaps = 49/372 (13%)
Query: 267 NLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQ-M 325
N+ ++ L+++Y G++ AR F+ I+ RDV +WN+MI GY + E + F M
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 326 LQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGN 385
L S + P+ TF SVL AC + +D G IH K + +V + SLI +Y++
Sbjct: 145 LSSGLTPDYRTFPSVLKACRTV--ID-GNKIHCLALK-FGFMWDVYVAASLIHLYSRYKA 200
Query: 386 IKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQP-DDITFVGVLS 444
+ A +FD M + + SWNAMISG G A +AL+L GL+ D +T V +LS
Sbjct: 201 VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLS 255
Query: 445 ACNHAGLLDIGRQYFNAMIQDYKISPKLQH----YGCMVDLLGRAGLFDEAEALLKTMEM 500
AC AG + G I Y I L+ ++DL G + + + M +
Sbjct: 256 ACTEAGDFNRG-----VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYV 310
Query: 501 KPDAAIWTSLLGACRVHGRLELGESVAKHL-----LELEPENPGAYVLLSNMYAGAGRWD 555
+ D W S++ A EL E + + + L P L+S
Sbjct: 311 R-DLISWNSIIKA------YELNEQPLRAISLFQEMRLSRIQPDCLTLIS---------- 353
Query: 556 DVATIRTRLND-KGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKS 614
+A+I ++L D + + V G ++ G + + +G+ V +Y L +D+
Sbjct: 354 -LASILSQLGDIRACRSVQG-FTLRKGWFLEDITIGNAVVV----MYAKLGLVDSARAVF 407
Query: 615 GFVPDTSEVLYD 626
++P+T + ++
Sbjct: 408 NWLPNTDVISWN 419
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 103/260 (39%), Gaps = 55/260 (21%)
Query: 346 YLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWN 405
Y L K +HA + + Q + NV + L+++Y GN+ A FD + + + +WN
Sbjct: 63 YCTNLQSAKCLHARLVVSKQ-IQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWN 121
Query: 406 AMISGLAMHGKADKALSLFSR-MIGEGLQPDDITFVGVLSACN--------HAGLLDIGR 456
MISG G + + + FS M+ GL PD TF VL AC H L G
Sbjct: 122 LMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFG- 180
Query: 457 QYFNAMIQDYKISPKLQHYGCMVDLLGRAG-LFDE----------------------AEA 493
+ D ++ L H +G A LFDE EA
Sbjct: 181 -----FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 235
Query: 494 LLKTMEMKP-DAAIWTSLLGACRVHGRLELGESV----AKHLLELEPENPGAYVLLSN-- 546
L + ++ D+ SLL AC G G ++ KH LE E + +SN
Sbjct: 236 LTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE-------LFVSNKL 288
Query: 547 --MYAGAGRWDDVATIRTRL 564
+YA GR D + R+
Sbjct: 289 IDLYAEFGRLRDCQKVFDRM 308
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 488 bits (1255), Expect = e-137, Method: Compositional matrix adjust.
Identities = 255/664 (38%), Positives = 390/664 (58%), Gaps = 11/664 (1%)
Query: 47 KQVHSQIIKTGL---HNTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIR 103
+Q+H+ K G + + AL L CA D+ AL F N V+WN ++
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCA-----DIETALDYFLETEVENVVLWNVMLV 463
Query: 104 GHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLES 163
+ L + + + +M + VPN YT+P ILK+C ++ + G+QIH+ ++K +
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523
Query: 164 DPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMP 223
+ +V + LI+MYA+ G+L++A + + + +D VS+T +I GY + D A F +M
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 224 IREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGD 283
R +E + +SACA + +L+ G + + G S+L NAL+ +YS+CG
Sbjct: 584 DR--GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK 641
Query: 284 LVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPA 343
+ ++ FE E D I+WN ++ G+ + + +EAL +F +M + I+ N+ TF S + A
Sbjct: 642 IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 701
Query: 344 CAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLAS 403
+ + GK +HA I K + + +LI MYAKCG+I AE+ F + K S
Sbjct: 702 ASETANMKQGKQVHAVITKTGYD-SETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS 760
Query: 404 WNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMI 463
WNA+I+ + HG +AL F +MI ++P+ +T VGVLSAC+H GL+D G YF +M
Sbjct: 761 WNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMN 820
Query: 464 QDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELG 523
+Y +SPK +HY C+VD+L RAGL A+ ++ M +KPDA +W +LL AC VH +E+G
Sbjct: 821 SEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIG 880
Query: 524 ESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSV 583
E A HLLELEPE+ YVLLSN+YA + +WD R ++ +KG+KK PG S IEV +
Sbjct: 881 EFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNS 940
Query: 584 VHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKL 643
+H F VGD+ HP + I+E ++ + G+V D +L ++ E K+ + HSEKL
Sbjct: 941 IHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKL 1000
Query: 644 AIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSC 703
AI++GL+S I ++KNLRVC +CH+ K +SK+ NREII RD RFHHF+ G CSC
Sbjct: 1001 AISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSC 1060
Query: 704 NDYW 707
DYW
Sbjct: 1061 KDYW 1064
Score = 256 bits (653), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 154/477 (32%), Positives = 251/477 (52%), Gaps = 9/477 (1%)
Query: 46 IKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGH 105
++Q+H++I+ GL ++ + LI++ + + F DL A VF+ +R + W +I G
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDL--ARRVFDGLRLKDHSSWVAMISGL 263
Query: 106 SLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDP 165
S + AI+ + M + G +P Y F +L +C KI ++ G+Q+H VLKLG SD
Sbjct: 264 SKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 323
Query: 166 FVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIR 225
+V +L+++Y G L SA +F+ S RDAV+Y LI G + GY + A +LF M +
Sbjct: 324 YVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHL- 382
Query: 226 EENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLV 285
+ P+ +T+ +++ AC+ G+L G + + G SN + AL+++Y+KC D+
Sbjct: 383 -DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 441
Query: 286 KARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACA 345
A D F E +V+ WNVM+ Y D + + +FRQM I PN T+ S+L C
Sbjct: 442 TALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCI 501
Query: 346 YLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWN 405
LG L+LG+ IH+ I K + +L N + + LIDMYAK G + A + K + SW
Sbjct: 502 RLGDLELGEQIHSQIIKTNFQL-NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 560
Query: 406 AMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQ-YFNAMIQ 464
MI+G + DKAL+ F +M+ G++ D++ +SAC L G+Q + A +
Sbjct: 561 TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS 620
Query: 465 DYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLE 521
+ S L +V L R G +E+ + E + A W +L+ + G E
Sbjct: 621 GF--SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVSGFQQSGNNE 674
Score = 212 bits (540), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 142/472 (30%), Positives = 243/472 (51%), Gaps = 16/472 (3%)
Query: 47 KQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGHS 106
+++HSQI+K GL + KL + GDL A VF+ + E WN +I+
Sbjct: 105 RKLHSQILKLGLDSNGCLSEKLFDFYLFK--GDLYGAFKVFDEMPERTIFTWNKMIK--E 160
Query: 107 LSSSPVVAIKF--YVRMILSGFVPNTYTFPFILKSCAKIS-AISEGKQIHAHVLKLGLES 163
L+S ++ F +VRM+ PN TF +L++C S A +QIHA +L GL
Sbjct: 161 LASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRD 220
Query: 164 DPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMP 223
V LI++Y++NG ++ AR VF+ L+D S+ A+I+G + +A +LF +M
Sbjct: 221 STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 280
Query: 224 IREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGD 283
+ +P +VLSAC + SLE+G + L+ G S+ +V NAL+ +Y G+
Sbjct: 281 VL--GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 338
Query: 284 LVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPA 343
L+ A +F ++ +RD +++N +I G + ++A+ LF++M +EP+ T S++ A
Sbjct: 339 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA 398
Query: 344 CAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLAS 403
C+ G L G+ +HAY K NN + +L+++YAKC +I+ A F + +
Sbjct: 399 CSADGTLFRGQQLHAYTTKLGFASNN-KIEGALLNLYAKCADIETALDYFLETEVENVVL 457
Query: 404 WNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMI 463
WN M+ + + +F +M E + P+ T+ +L C G L++G Q + +I
Sbjct: 458 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 517
Query: 464 QDYKISPKLQHYGC--MVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGA 513
K + +L Y C ++D+ + G D A +L K D WT+++
Sbjct: 518 ---KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAG 565
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 140/484 (28%), Positives = 231/484 (47%), Gaps = 49/484 (10%)
Query: 125 GFVPNTYTFPFILKSCAKIS-AISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELES 183
G PN T ++L+ C K + ++ EG+++H+ +LKLGL+S+ + L + Y G+L
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 184 ARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSAC 243
A VF++ R ++ +I ASR + + LF M EN PNE T VL AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMV--SENVTPNEGTFSGVLEAC 196
Query: 244 AHMG-SLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISW 302
+ ++ + + I GL + V N LID+YS+ G + AR +F+ + +D SW
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 256
Query: 303 NVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDK 362
MI G + EA+ LF M I P F SVL AC + +L++G+ +H + K
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 363 NHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALS 422
++ + +L+ +Y GN+ +AE +F M + ++N +I+GL+ G +KA+
Sbjct: 317 LGFS-SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 375
Query: 423 LFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYF----------NAMIQ-------- 464
LF RM +GL+PD T ++ AC+ G L G+Q N I+
Sbjct: 376 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 435
Query: 465 ---------DYKISPKLQH----------YGCMVDLLGRAGLFDEAEALLKTMEMKPDAA 505
DY + ++++ YG + DL +F + ++ E+ P+
Sbjct: 436 KCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQ----MQIEEIVPNQY 491
Query: 506 IWTSLLGACRVHGRLELGESVAKHLLELEPENPGAYV--LLSNMYAGAGRWDDVATIRTR 563
+ S+L C G LELGE + +++ + AYV +L +MYA G+ D I R
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQ-LNAYVCSVLIDMYAKLGKLDTAWDILIR 550
Query: 564 LNDK 567
K
Sbjct: 551 FAGK 554
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 89/218 (40%), Gaps = 39/218 (17%)
Query: 38 SKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVI 97
S+ NM+ KQVH+ I KTG + + LI + A G +S A F + N+V
Sbjct: 703 SETANMKQGKQVHAVITKTGYDSETEVCNALISMYA--KCGSISDAEKQFLEVSTKNEVS 760
Query: 98 WNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEG-KQIHAHV 156
WN II +S A+ + +MI S PN T +L +C+ I + +G +
Sbjct: 761 WNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMN 820
Query: 157 LKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDAR 216
+ GL P + +++M + G L A+
Sbjct: 821 SEYGLSPKPEHYVCVVDMLTR-------------------------------AGLLSRAK 849
Query: 217 QLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNW 254
+ EMPI+ P+ T+LSAC ++E+G +
Sbjct: 850 EFIQEMPIK-----PDALVWRTLLSACVVHKNMEIGEF 882
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 486 bits (1252), Expect = e-136, Method: Compositional matrix adjust.
Identities = 253/578 (43%), Positives = 367/578 (63%), Gaps = 10/578 (1%)
Query: 134 PFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQN---GELESARLVFNK 190
P +L S K +++ E QI A+ +K +E FV LIN ++ + AR +F
Sbjct: 32 PILLIS--KCNSLRELMQIQAYAIKSHIEDVSFV-AKLINFCTESPTESSMSYARHLFEA 88
Query: 191 SSLRDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLE 250
S D V + ++ GY+ + LF E I E+ +P+ T ++L ACA +LE
Sbjct: 89 MSEPDIVIFNSMARGYSRFTNPLEVFSLFVE--ILEDGILPDNYTFPSLLKACAVAKALE 146
Query: 251 LGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYT 310
G + L GL N++V LI+MY++C D+ AR +F+ I + V+ +N MI GY
Sbjct: 147 EGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYA 206
Query: 311 HTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNV 370
+ EAL LFR+M ++PN++T LSVL +CA LG+LDLGKWIH Y K H V
Sbjct: 207 RRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA-KKHSFCKYV 265
Query: 371 SLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGE 430
+ T+LIDM+AKCG++ A +F+ M YK +W+AMI A HGKA+K++ +F RM E
Sbjct: 266 KVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSE 325
Query: 431 GLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDE 490
+QPD+ITF+G+L+AC+H G ++ GR+YF+ M+ + I P ++HYG MVDLL RAG ++
Sbjct: 326 NVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLED 385
Query: 491 AEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAG 550
A + + + P +W LL AC H L+L E V++ + EL+ + G YV+LSN+YA
Sbjct: 386 AYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYAR 445
Query: 551 AGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDAL 610
+W+ V ++R + D+ KVPGCSSIEV +VVHEF GD V + ++ LDE+
Sbjct: 446 NKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKE 505
Query: 611 LEKSGFVPDTSEVLY-DMDEEWKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGN 669
L+ SG+VPDTS V++ +M+++ KE L +HSEKLAI +GL++T PGTTIR+VKNLRVC +
Sbjct: 506 LKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRD 565
Query: 670 CHSATKLISKIFNREIIARDRNRFHHFKDGNCSCNDYW 707
CH+A KLIS IF R+++ RD RFHHF+DG CSC D+W
Sbjct: 566 CHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 259 bits (662), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 239/403 (59%), Gaps = 5/403 (1%)
Query: 28 LQNQPSLALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPF-GDLSYALLV 86
+ Q + L+SKC +++ + Q+ + IK+ + + F ++KLI C SP +SYA +
Sbjct: 27 VNTQNPILLISKCNSLRELMQIQAYAIKSHIEDVSF-VAKLINFCTESPTESSMSYARHL 85
Query: 87 FETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAI 146
FE + EP+ VI+N++ RG+S ++P+ +V ++ G +P+ YTFP +LK+CA A+
Sbjct: 86 FEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKAL 145
Query: 147 SEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGY 206
EG+Q+H +KLGL+ + +V +LINMY + +++SAR VF++ V Y A+ITGY
Sbjct: 146 EEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGY 205
Query: 207 ASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGS 266
A R ++A LF EM + + PNE T+++VLS+CA +GSL+LG W+ + H
Sbjct: 206 ARRNRPNEALSLFREM--QGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCK 263
Query: 267 NLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQML 326
+ V ALIDM++KCG L A +FE + +D +W+ MI Y + ++++++F +M
Sbjct: 264 YVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMR 323
Query: 327 QSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNI 386
N++P+++TFL +L AC++ G ++ G+ + + + ++ + S++D+ ++ GN+
Sbjct: 324 SENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNL 383
Query: 387 KAAEQVFDGMGYK-TLASWNAMISGLAMHGKADKALSLFSRMI 428
+ A + D + T W +++ + H D A + R+
Sbjct: 384 EDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIF 426
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 480 bits (1235), Expect = e-134, Method: Compositional matrix adjust.
Identities = 263/661 (39%), Positives = 389/661 (58%), Gaps = 8/661 (1%)
Query: 49 VHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGHSLS 108
+HS I+K G + F + LI A S G + A VFE I + V+W I+ + +
Sbjct: 168 LHSPIVKLGYDSNAFVGAALIN--AYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVEN 225
Query: 109 SSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVH 168
++K M ++GF+PN YTF LK+ + A K +H +LK DP V
Sbjct: 226 GYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG 285
Query: 169 TSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIREEN 228
L+ +Y Q G++ A VFN+ D V ++ +I + G+ ++A LF M RE
Sbjct: 286 VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM--REAF 343
Query: 229 FVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKAR 288
VPNE T+ ++L+ CA LG + L+ G +++V+NALID+Y+KC + A
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAV 403
Query: 289 DLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLG 348
LF + ++ +SWN +I GY + + +A +FR+ L++ + +VTF S L ACA L
Sbjct: 404 KLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLA 463
Query: 349 ALDLGKWIHAY-IDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAM 407
++DLG +H I N+ K V++ SLIDMYAKCG+IK A+ VF+ M +ASWNA+
Sbjct: 464 SMDLGVQVHGLAIKTNNAK--KVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNAL 521
Query: 408 ISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYK 467
ISG + HG +AL + M +P+ +TF+GVLS C++AGL+D G++ F +MI+D+
Sbjct: 522 ISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHG 581
Query: 468 ISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVA 527
I P L+HY CMV LLGR+G D+A L++ + +P IW ++L A E A
Sbjct: 582 IEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSA 641
Query: 528 KHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEF 587
+ +L++ P++ YVL+SNMYAGA +W +VA+IR + + G+KK PG S IE VH F
Sbjct: 642 EEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYF 701
Query: 588 LVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIAY 647
VG HP K I ML+ ++ ++G+VPD + VL DMD+E K+ L HSE+LA+AY
Sbjct: 702 SVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAY 761
Query: 648 GLISTKPG-TTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCNDY 706
GL+ I I+KNLR+C +CHSA K+IS I R+++ RD NRFHHF G CSC D+
Sbjct: 762 GLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDH 821
Query: 707 W 707
W
Sbjct: 822 W 822
Score = 189 bits (479), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 138/502 (27%), Positives = 231/502 (46%), Gaps = 14/502 (2%)
Query: 20 SSDPPYKLLQNQPSLALLSKCTNMQN---IKQVHSQIIKTGLHNTQFALSKLIEICAVSP 76
SSD L + A+L +C + K +H I+K G FA + L+ +
Sbjct: 39 SSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAG 98
Query: 77 FGDLSYALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFI 136
F AL +F+ + E N V + + +G++ I Y R+ G N + F
Sbjct: 99 FD--KDALNLFDEMPERNNVSFVTLAQGYACQDP----IGLYSRLHREGHELNPHVFTSF 152
Query: 137 LKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDA 196
LK + +H+ ++KLG +S+ FV +LIN Y+ G ++SAR VF +D
Sbjct: 153 LKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDI 212
Query: 197 VSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVC 256
V + +++ Y GY +D+ +L M R F+PN T T L A +G+ + V
Sbjct: 213 VVWAGIVSCYVENGYFEDSLKLLSCM--RMAGFMPNNYTFDTALKASIGLGAFDFAKGVH 270
Query: 257 SLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYK 316
I + V L+ +Y++ GD+ A +F + K DV+ W+ MI +
Sbjct: 271 GQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCN 330
Query: 317 EALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSL 376
EA+ LF +M ++ + PN+ T S+L CA LG+ +H + K L ++ + +L
Sbjct: 331 EAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDL-DIYVSNAL 389
Query: 377 IDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDD 436
ID+YAKC + A ++F + K SWN +I G G+ KA S+F + + +
Sbjct: 390 IDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTE 449
Query: 437 ITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLK 496
+TF L AC +D+G Q I+ + K+ ++D+ + G A+++
Sbjct: 450 VTFSSALGACASLASMDLGVQVHGLAIKTNN-AKKVAVSNSLIDMYAKCGDIKFAQSVFN 508
Query: 497 TMEMKPDAAIWTSLLGACRVHG 518
ME D A W +L+ HG
Sbjct: 509 EME-TIDVASWNALISGYSTHG 529
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 477 bits (1228), Expect = e-133, Method: Compositional matrix adjust.
Identities = 250/572 (43%), Positives = 358/572 (62%), Gaps = 10/572 (1%)
Query: 143 ISAISEGKQIHAHVLKLGLE-SDPFVHTSLINMYAQ---NGELESARLVFNK-SSLRDAV 197
+S+I++ +QIHA ++ G+ SD + LI + A VF+K +
Sbjct: 27 VSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVF 86
Query: 198 SYTALITGYASRGYLDDARQLFDEMPIREENFV-PNESTVVTVLSACAHMGSLELGNWVC 256
+ LI GYA G A L+ EM R V P+ T ++ A M + LG +
Sbjct: 87 IWNTLIRGYAEIGNSISAFSLYREM--RVSGLVEPDTHTYPFLIKAVTTMADVRLGETIH 144
Query: 257 SLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYK 316
S++ G GS ++V N+L+ +Y+ CGD+ A +F+ + ++D+++WN +I G+ +
Sbjct: 145 SVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPE 204
Query: 317 EALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSL 376
EAL L+ +M I+P+ T +S+L ACA +GAL LGK +H Y+ K N+ L
Sbjct: 205 EALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT-RNLHSSNVL 263
Query: 377 IDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIG-EGLQPD 435
+D+YA+CG ++ A+ +FD M K SW ++I GLA++G +A+ LF M EGL P
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 323
Query: 436 DITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALL 495
+ITFVG+L AC+H G++ G +YF M ++YKI P+++H+GCMVDLL RAG +A +
Sbjct: 324 EITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYI 383
Query: 496 KTMEMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWD 555
K+M M+P+ IW +LLGAC VHG +L E +L+LEP + G YVLLSNMYA RW
Sbjct: 384 KSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWS 443
Query: 556 DVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSG 615
DV IR ++ G+KKVPG S +EVG+ VHEFL+GDK HPQS IY L E+ L G
Sbjct: 444 DVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEG 503
Query: 616 FVPDTSEVLYDMDEEWKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATK 675
+VP S V D++EE KE A+ +HSEK+AIA+ LIST + I +VKNLRVC +CH A K
Sbjct: 504 YVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIK 563
Query: 676 LISKIFNREIIARDRNRFHHFKDGNCSCNDYW 707
L+SK++NREI+ RDR+RFHHFK+G+CSC DYW
Sbjct: 564 LVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 231/420 (55%), Gaps = 25/420 (5%)
Query: 34 LALLSKCTNM---------QNIKQVHSQIIKTGLHNTQFALSK-----LIEICAVSPFGD 79
L ++ KC N+ ++Q+H+ I+ G+ + L K L+ + + P
Sbjct: 12 LPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPP--- 68
Query: 80 LSYALLVFETIREP-NQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFV-PNTYTFPFIL 137
+SYA VF I +P N IWN +IRG++ + + A Y M +SG V P+T+T+PF++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 138 KSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAV 197
K+ ++ + G+ IH+ V++ G S +V SL+++YA G++ SA VF+K +D V
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 198 SYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCS 257
++ ++I G+A G ++A L+ EM + P+ T+V++LSACA +G+L LG V
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEM--NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHV 246
Query: 258 LIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKE 317
+ GL NLH +N L+D+Y++CG + +A+ LF+ + ++ +SW +I G KE
Sbjct: 247 YMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKE 306
Query: 318 ALMLFRQMLQSN-IEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSL 376
A+ LF+ M + + P ++TF+ +L AC++ G + G + + ++ + + +
Sbjct: 307 AIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCM 366
Query: 377 IDMYAKCGNIKAAEQVFDGMGYK-TLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPD 435
+D+ A+ G +K A + M + + W ++ +HG +D L+ F+R+ L+P+
Sbjct: 367 VDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEPN 424
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust.
Identities = 252/663 (38%), Positives = 396/663 (59%), Gaps = 12/663 (1%)
Query: 48 QVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGHSL 107
QVH+ ++K GL T + LI + G++ A ++F+ + V WN++I G++
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINL--YLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 108 SSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFV 167
+ + A+ + M L+ + +F ++K CA + + +Q+H V+K G D +
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 168 HTSLINMYAQ-NGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIRE 226
T+L+ Y++ L++ RL + + VS+TA+I+G+ ++A LF EM +
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM--KR 390
Query: 227 ENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVK 286
+ PNE T +L+A + E+ V + V AL+D Y K G + +
Sbjct: 391 KGVRPNEFTYSVILTALPVISPSEVHAQVVKT----NYERSSTVGTALLDAYVKLGKVEE 446
Query: 287 ARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAY 346
A +F I+ +D+++W+ M+ GY T + + A+ +F ++ + I+PN+ TF S+L CA
Sbjct: 447 AAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAA 506
Query: 347 LGA-LDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWN 405
A + GK H + K+ +++ + ++L+ MYAK GNI++AE+VF K L SWN
Sbjct: 507 TNASMGQGKQFHGFAIKSRLD-SSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWN 565
Query: 406 AMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQD 465
+MISG A HG+A KAL +F M ++ D +TF+GV +AC HAGL++ G +YF+ M++D
Sbjct: 566 SMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRD 625
Query: 466 YKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGES 525
KI+P +H CMVDL RAG ++A +++ M + IW ++L ACRVH + ELG
Sbjct: 626 CKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRL 685
Query: 526 VAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVH 585
A+ ++ ++PE+ AYVLLSNMYA +G W + A +R +N++ +KK PG S IEV + +
Sbjct: 686 AAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTY 745
Query: 586 EFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAI 645
FL GD+ HP IY L+++ L+ G+ PDTS VL D+D+E KE L+ HSE+LAI
Sbjct: 746 SFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAI 805
Query: 646 AYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHF-KDGNCSCN 704
A+GLI+T G+ + I+KNLRVCG+CH KLI+KI REI+ RD NRFHHF DG CSC
Sbjct: 806 AFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCG 865
Query: 705 DYW 707
D+W
Sbjct: 866 DFW 868
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/479 (28%), Positives = 250/479 (52%), Gaps = 21/479 (4%)
Query: 47 KQVHSQIIKTG-LHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGH 105
+Q+H Q IK G L + S + S F D VF+ ++E N V W +I G+
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKD---GRKVFDEMKERNVVTWTTLISGY 169
Query: 106 SLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDP 165
+ +S + ++RM G PN++TF L A+ G Q+H V+K GL+
Sbjct: 170 ARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTI 229
Query: 166 FVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIR 225
V SLIN+Y + G + AR++F+K+ ++ V++ ++I+GYA+ G +A +F M +
Sbjct: 230 PVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL- 288
Query: 226 EENFVP-NESTVVTVLSACAHMGSLELGNWV-CSLIEGHGLGSNLHVTNALIDMYSKCGD 283
N+V +ES+ +V+ CA++ L + CS+++ +G + ++ AL+ YSKC
Sbjct: 289 --NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK-YGFLFDQNIRTALMVAYSKCTA 345
Query: 284 LVKARDLFESIE-KRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLP 342
++ A LF+ I +V+SW MI G+ +EA+ LF +M + + PN+ T+ +L
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 343 ACAYLGALDLGKWIHAYIDK-NHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTL 401
A + + +HA + K N+++ + V T+L+D Y K G ++ A +VF G+ K +
Sbjct: 406 ALPVISPSE----VHAQVVKTNYERSSTVG--TALLDAYVKLGKVEEAAKVFSGIDDKDI 459
Query: 402 ASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGL-LDIGRQYFN 460
+W+AM++G A G+ + A+ +F + G++P++ TF +L+ C + G+Q+
Sbjct: 460 VAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG 519
Query: 461 AMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGR 519
I+ ++ L ++ + + G + AE + K K D W S++ HG+
Sbjct: 520 FAIKS-RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK-DLVSWNSMISGYAQHGQ 576
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 209/423 (49%), Gaps = 10/423 (2%)
Query: 100 NIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKL 159
+++ G S A + ++ + G + F +LK A + G+Q+H +K
Sbjct: 63 SLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKF 122
Query: 160 GLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLF 219
G D V TSL++ Y + + R VF++ R+ V++T LI+GYA D+ LF
Sbjct: 123 GFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLF 182
Query: 220 DEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYS 279
M ++ E PN T L A G G V +++ +GL + V+N+LI++Y
Sbjct: 183 --MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYL 240
Query: 280 KCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLS 339
KCG++ KAR LF+ E + V++WN MI GY EAL +F M + + ++ +F S
Sbjct: 241 KCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFAS 300
Query: 340 VLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMG-Y 398
V+ CA L L + +H + K + L + ++ T+L+ Y+KC + A ++F +G
Sbjct: 301 VIKLCANLKELRFTEQLHCSVVK-YGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCV 359
Query: 399 KTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQY 458
+ SW AMISG + ++A+ LFS M +G++P++ T+ +L+A ++ Q
Sbjct: 360 GNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQV 419
Query: 459 FNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHG 518
+Y+ S + ++D + G +EA + ++ K D W+++L G
Sbjct: 420 VKT---NYERSSTVGT--ALLDAYVKLGKVEEAAKVFSGIDDK-DIVAWSAMLAGYAQTG 473
Query: 519 RLE 521
E
Sbjct: 474 ETE 476
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 145/292 (49%), Gaps = 10/292 (3%)
Query: 179 GELESARL-----VFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNE 233
G + S+RL +F+KS RD SY +L+ G++ G +A++LF + I +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLF--LNIHRLGMEMDC 93
Query: 234 STVVTVLSACAHMGSLELGNWV-CSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFE 292
S +VL A + G + C I+ G ++ V +L+D Y K + R +F+
Sbjct: 94 SIFSSVLKVSATLCDELFGRQLHCQCIK-FGFLDDVSVGTSLVDTYMKGSNFKDGRKVFD 152
Query: 293 SIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDL 352
+++R+V++W +I GY S E L LF +M +PN TF + L A G
Sbjct: 153 EMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212
Query: 353 GKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLA 412
G +H + KN + + SLI++Y KCGN++ A +FD K++ +WN+MISG A
Sbjct: 213 GLQVHTVVVKNGLD-KTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 413 MHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQ 464
+G +AL +F M ++ + +F V+ C + L Q ++++
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK 323
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 475 bits (1222), Expect = e-133, Method: Compositional matrix adjust.
Identities = 249/616 (40%), Positives = 369/616 (59%), Gaps = 19/616 (3%)
Query: 98 WNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVL 157
WN +R + S +I Y M+ SG P+ ++FPFILKSCA +S G+Q+H HV
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 158 KLGLESDPFVHTSLINMYAQNGELESARLVF--NKSSLRDAVSYTALITGYASRGYLDDA 215
K G E++PFV T+LI+MY + G + AR VF N S + +V Y ALI+GY + + DA
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 216 RQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTNALI 275
+F M +E + T++ ++ C L LG + GL S + V N+ I
Sbjct: 141 AYMFRRM--KETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFI 198
Query: 276 DMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDV 335
MY KCG + R LF+ + + +I+WN +I GY+ + L L+ QM S + P+
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258
Query: 336 TFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDG 395
T +SVL +CA+LGA +G + ++ N + NV + + I MYA+CGN+ A VFD
Sbjct: 259 TLVSVLSSCAHLGAKKIGHEVGKLVESN-GFVPNVFVSNASISMYARCGNLAKARAVFDI 317
Query: 396 MGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIG 455
M K+L SW AMI MHG + L LF MI G++PD FV VLSAC+H+GL D G
Sbjct: 318 MPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377
Query: 456 RQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACR 515
+ F AM ++YK+ P +HY C+VDLLGRAG DEA +++M ++PD A+W +LLGAC+
Sbjct: 378 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437
Query: 516 VHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGC 575
+H +++ E ++E EP N G YVL+SN+Y+ + + + IR + ++ +K PG
Sbjct: 438 IHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGY 497
Query: 576 SSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEID-ALLEKSGFVPDTSEVLYDMDEEWKEG 634
S +E VH FL GD+ H Q++ ++ MLDE++ +++E +G +MD + E
Sbjct: 498 SYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAG----------NMDCDRGEE 547
Query: 635 ALS---HHSEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRN 691
S HSE+LAIA+G++++ PGT I ++KNLRVC +CH K +SKI +R+ + RD +
Sbjct: 548 VSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDAS 607
Query: 692 RFHHFKDGNCSCNDYW 707
RFH+FKDG CSC DYW
Sbjct: 608 RFHYFKDGVCSCKDYW 623
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 213/402 (52%), Gaps = 11/402 (2%)
Query: 47 KQVHSQIIKTGLHNTQFALSKLIEI-CAVSPFGDLSYALLVFETIREPNQ--VIWNNIIR 103
+Q+H + K G F L+ LI + C D A VFE + +Q V +N +I
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYCKCGLVAD---ARKVFEENPQSSQLSVCYNALIS 129
Query: 104 GHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLES 163
G++ +S A + RM +G ++ T ++ C + G+ +H +K GL+S
Sbjct: 130 GYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDS 189
Query: 164 DPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMP 223
+ V S I MY + G +E+ R +F++ ++ +++ A+I+GY+ G D +L+++M
Sbjct: 190 EVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQM- 248
Query: 224 IREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGD 283
+ P+ T+V+VLS+CAH+G+ ++G+ V L+E +G N+ V+NA I MY++CG+
Sbjct: 249 -KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGN 307
Query: 284 LVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPA 343
L KAR +F+ + + ++SW MIG Y + LMLF M++ I P+ F+ VL A
Sbjct: 308 LAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSA 367
Query: 344 CAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYK-TLA 402
C++ G D G + + + ++ ++ L+D+ + G + A + + M + A
Sbjct: 368 CSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGA 427
Query: 403 SWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLS 444
W A++ +H D A F+++I +P++I + ++S
Sbjct: 428 VWGALLGACKIHKNVDMAELAFAKVI--EFEPNNIGYYVLMS 467
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 145/309 (46%), Gaps = 11/309 (3%)
Query: 34 LALLSKCTNMQNI---KQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETI 90
L L+ CT + + + +H Q +K GL + L+ I + G + +F+ +
Sbjct: 160 LGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM--YMKCGSVEAGRRLFDEM 217
Query: 91 REPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGK 150
+ WN +I G+S + ++ Y +M SG P+ +T +L SCA + A G
Sbjct: 218 PVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGH 277
Query: 151 QIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRG 210
++ V G + FV + I+MYA+ G L AR VF+ ++ VS+TA+I Y G
Sbjct: 278 EVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHG 337
Query: 211 YLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELG-NWVCSLIEGHGLGSNLH 269
+ LFD+M R P+ + V VLSAC+H G + G ++ + L
Sbjct: 338 MGEIGLMLFDDMIKR--GIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPE 395
Query: 270 VTNALIDMYSKCGDLVKARDLFESIE-KRDVISWNVMIGGYTHTSDYKEALMLFRQMLQS 328
+ L+D+ + G L +A + ES+ + D W ++G + A + F ++++
Sbjct: 396 HYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE- 454
Query: 329 NIEPNDVTF 337
EPN++ +
Sbjct: 455 -FEPNNIGY 462
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 259/646 (40%), Positives = 372/646 (57%), Gaps = 52/646 (8%)
Query: 63 FALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMI 122
F L+K+I C S GD+ AL VF +R N + WN+++ G +S P
Sbjct: 62 FPLNKIIARCVRS--GDIDGALRVFHGMRAKNTITWNSLLIG--ISKDP----------- 106
Query: 123 LSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELE 182
S + E Q+ + E D F + +++ Y +N E
Sbjct: 107 ---------------------SRMMEAHQLFDEIP----EPDTFSYNIMLSCYVRNVNFE 141
Query: 183 SARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSA 242
A+ F++ +DA S+ +ITGYA RG ++ AR+LF M NE + ++S
Sbjct: 142 KAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM------MEKNEVSWNAMISG 195
Query: 243 CAHMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIE-KRDVIS 301
G LE + + G+ + A+I Y K + A +F+ + +++++
Sbjct: 196 YIECGDLEKASHFFKVAPVRGVVA----WTAMITGYMKAKKVELAEAMFKDMTVNKNLVT 251
Query: 302 WNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYID 361
WN MI GY S ++ L LFR ML+ I PN S L C+ L AL LG+ IH +
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS 311
Query: 362 KNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKAL 421
K+ N+V+ TSLI MY KCG + A ++F+ M K + +WNAMISG A HG ADKAL
Sbjct: 312 KS-TLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKAL 370
Query: 422 SLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDL 481
LF MI ++PD ITFV VL ACNHAGL++IG YF +M++DYK+ P+ HY CMVDL
Sbjct: 371 CLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDL 430
Query: 482 LGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPENPGAY 541
LGRAG +EA L+++M +P AA++ +LLGACRVH +EL E A+ LL+L +N Y
Sbjct: 431 LGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGY 490
Query: 542 VLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIY 601
V L+N+YA RW+DVA +R R+ + + KVPG S IE+ + VH F D++HP+ I+
Sbjct: 491 VQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIH 550
Query: 602 EMLDEIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIAYGLISTKPGTTIRIV 661
+ L E++ ++ +G+ P+ L++++EE KE L HSEKLA+A+G I G+ I++
Sbjct: 551 KKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVF 610
Query: 662 KNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCNDYW 707
KNLR+CG+CH A K IS+I REII RD RFHHFKDG+CSC DYW
Sbjct: 611 KNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 33 SLALL--SKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEI-CAVSPFGDLSYALLVFET 89
S ALL S+ + +Q +Q+H + K+ L N AL+ LI + C GD A +FE
Sbjct: 288 SSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGD---AWKLFEV 344
Query: 90 IREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEG 149
+++ + V WN +I G++ + A+ + MI + P+ TF +L +C ++ G
Sbjct: 345 MKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIG 404
Query: 150 -KQIHAHVLKLGLESDPFVHTSLINMYAQNGELESA 184
+ V +E P +T ++++ + G+LE A
Sbjct: 405 MAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEA 440
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 472 bits (1214), Expect = e-132, Method: Compositional matrix adjust.
Identities = 249/629 (39%), Positives = 378/629 (60%), Gaps = 11/629 (1%)
Query: 83 ALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSG---FVPNTYTFPFILKS 139
A VF+ + + V +N +I G+ + ++ VRM L F P+ T +L++
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYL----KLEMVEESVRMFLENLDQFKPDLLTVSSVLRA 316
Query: 140 CAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSY 199
C + +S K I+ ++LK G + V LI++YA+ G++ +AR VFN +D VS+
Sbjct: 317 CGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSW 376
Query: 200 TALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLI 259
++I+GY G L +A +LF M I EE + T + ++S + L+ G + S
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQ--ADHITYLMLISVSTRLADLKFGKGLHSNG 434
Query: 260 EGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEAL 319
G+ +L V+NALIDMY+KCG++ + +F S+ D ++WN +I D+ L
Sbjct: 435 IKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGL 494
Query: 320 MLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDM 379
+ QM +S + P+ TFL LP CA L A LGK IH + + + + + + +LI+M
Sbjct: 495 QVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYE-SELQIGNALIEM 553
Query: 380 YAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITF 439
Y+KCG ++ + +VF+ M + + +W MI M+G+ +KAL F+ M G+ PD + F
Sbjct: 554 YSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVF 613
Query: 440 VGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTME 499
+ ++ AC+H+GL+D G F M YKI P ++HY C+VDLL R+ +AE ++ M
Sbjct: 614 IAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMP 673
Query: 500 MKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVAT 559
+KPDA+IW S+L ACR G +E E V++ ++EL P++PG +L SN YA +WD V+
Sbjct: 674 IKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSL 733
Query: 560 IRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPD 619
IR L DK + K PG S IEVG VH F GD PQS+ IY+ L+ + +L+ K G++PD
Sbjct: 734 IRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPD 793
Query: 620 TSEVLYDM-DEEWKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLIS 678
EV ++ +EE K + HSE+LAIA+GL++T+PGT ++++KNLRVCG+CH TKLIS
Sbjct: 794 PREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLIS 853
Query: 679 KIFNREIIARDRNRFHHFKDGNCSCNDYW 707
KI REI+ RD NRFH FKDG CSC D W
Sbjct: 854 KIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 179/605 (29%), Positives = 303/605 (50%), Gaps = 29/605 (4%)
Query: 37 LSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQV 96
LS +N+ ++++H+ +I GL ++ F KLI+ S F + + +L VF + V
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKLID--KYSHFREPASSLSVFRRVSPAKNV 71
Query: 97 -IWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAH 155
+WN+IIR S + A++FY ++ S P+ YTFP ++K+CA + G ++
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131
Query: 156 VLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDA 215
+L +G ESD FV +L++MY++ G L AR VF++ +RD VS+ +LI+GY+S GY ++A
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 216 RQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTNALI 275
+++ E+ + VP+ TV +VL A ++ ++ G + G+ S + V N L+
Sbjct: 192 LEIYHEL--KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLV 249
Query: 276 DMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDV 335
MY K AR +F+ ++ RD +S+N MI GY +E++ +F + L +P+ +
Sbjct: 250 AMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLL 308
Query: 336 TFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDG 395
T SVL AC +L L L K+I+ Y+ K L + ++ LID+YAKCG++ A VF+
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLES-TVRNILIDVYAKCGDMITARDVFNS 367
Query: 396 MGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIG 455
M K SWN++ISG G +A+ LF M+ Q D IT++ ++S L G
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG 427
Query: 456 RQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACR 515
+ + I+ I L ++D+ + G ++ + +M D W +++ AC
Sbjct: 428 KGLHSNGIKS-GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISACV 485
Query: 516 VHGRLELGESVAKHLL--ELEPENPGAYVLLSNMYAGA----GRWDDVATIR------TR 563
G G V + E+ P+ V L + A G+ +R +
Sbjct: 486 RFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQ 545
Query: 564 LNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIY--------EMLDEIDALLEKSG 615
+ + ++ C +E S V E + V + IY E E A +EKSG
Sbjct: 546 IGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSG 605
Query: 616 FVPDT 620
VPD+
Sbjct: 606 IVPDS 610
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 208/405 (51%), Gaps = 9/405 (2%)
Query: 134 PFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNK-SS 192
PFI ++ + S ++E ++IHA V+ LGL+S F LI+ Y+ E S+ VF + S
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 193 LRDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELG 252
++ + ++I ++ G +A + + ++ RE P++ T +V+ ACA + E+G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKL--RESKVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 253 NWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHT 312
+ V I G S+L V NAL+DMYS+ G L +AR +F+ + RD++SWN +I GY+
Sbjct: 126 DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 313 SDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSL 372
Y+EAL ++ ++ S I P+ T SVLPA L + G+ +H + K+ V
Sbjct: 186 GYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245
Query: 373 WTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGL 432
L+ MY K A +VFD M + S+N MI G ++++ +F + +
Sbjct: 246 -NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-F 303
Query: 433 QPDDITFVGVLSACNHAGLLDIGRQYFNAMIQ-DYKISPKLQHYGCMVDLLGRAGLFDEA 491
+PD +T VL AC H L + + +N M++ + + +++ ++D+ + G A
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCGDMITA 361
Query: 492 EALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPE 536
+ +ME K D W S++ G L + K ++ +E +
Sbjct: 362 RDVFNSMECK-DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 471 bits (1213), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/579 (41%), Positives = 355/579 (61%), Gaps = 5/579 (0%)
Query: 131 YTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNK 190
+ + +L +C A+ +G+++HAH++K ++ T L+ Y + LE AR V ++
Sbjct: 53 HGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDE 112
Query: 191 SSLRDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLE 250
++ VS+TA+I+ Y+ G+ +A +F EM +R + PNE T TVL++C L
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEM-MRSDG-KPNEFTFATVLTSCIRASGLG 170
Query: 251 LGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYT 310
LG + LI S++ V ++L+DMY+K G + +AR++FE + +RDV+S +I GY
Sbjct: 171 LGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYA 230
Query: 311 HTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNV 370
+EAL +F ++ + PN VT+ S+L A + L LD GK H ++ + V
Sbjct: 231 QLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAV 290
Query: 371 SLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGE 430
L SLIDMY+KCGN+ A ++FD M +T SWNAM+ G + HG + L LF M E
Sbjct: 291 -LQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDE 349
Query: 431 G-LQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQ-DYKISPKLQHYGCMVDLLGRAGLF 488
++PD +T + VLS C+H + D G F+ M+ +Y P +HYGC+VD+LGRAG
Sbjct: 350 KRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRI 409
Query: 489 DEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMY 548
DEA +K M KP A + SLLGACRVH +++GESV + L+E+EPEN G YV+LSN+Y
Sbjct: 410 DEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLY 469
Query: 549 AGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEID 608
A AGRW DV +R + K + K PG S I+ +H F D+ HP+ + + + EI
Sbjct: 470 ASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEIS 529
Query: 609 ALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCG 668
++++G+VPD S VLYD+DEE KE L HSEKLA+ +GLI+T G IR+ KNLR+C
Sbjct: 530 IKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICV 589
Query: 669 NCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCNDYW 707
+CH+ K+ SK+F RE+ RD+NRFH DG CSC DYW
Sbjct: 590 DCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 210/419 (50%), Gaps = 18/419 (4%)
Query: 35 ALLSKCTNMQNIK---QVHSQIIKTGLHNTQFALSKLIEICAVSPFGD---LSYALLVFE 88
ALL+ C + + ++ +VH+ +IKT + ++L+ +G L A V +
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIF-----YGKCDCLEDARKVLD 111
Query: 89 TIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISE 148
+ E N V W +I +S + A+ + M+ S PN +TF +L SC + S +
Sbjct: 112 EMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGL 171
Query: 149 GKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYAS 208
GKQIH ++K +S FV +SL++MYA+ G+++ AR +F RD VS TA+I GYA
Sbjct: 172 GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQ 231
Query: 209 RGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNL 268
G ++A ++F + E PN T ++L+A + + L+ G + L
Sbjct: 232 LGLDEEALEMFHRL--HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYA 289
Query: 269 HVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQML-Q 327
+ N+LIDMYSKCG+L AR LF+++ +R ISWN M+ GY+ +E L LFR M +
Sbjct: 290 VLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDE 349
Query: 328 SNIEPNDVTFLSVLPACAYLGALDLGKWIH-AYIDKNHQKLNNVSLWTSLIDMYAKCGNI 386
++P+ VT L+VL C++ D G I + + + ++DM + G I
Sbjct: 350 KRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRI 409
Query: 387 KAAEQVFDGMGYK-TLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLS 444
A + M K T +++ +H D S+ R+I ++P++ +LS
Sbjct: 410 DEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLI--EIEPENAGNYVILS 466
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 469 bits (1207), Expect = e-131, Method: Compositional matrix adjust.
Identities = 261/681 (38%), Positives = 387/681 (56%), Gaps = 13/681 (1%)
Query: 34 LALLSKCTNMQNI---KQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETI 90
+ +L C + I K VH +K L + L+++ S G ++ A ++F+
Sbjct: 296 VTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDM--YSKCGCITNAQMIFKMN 353
Query: 91 REPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSG--FVPNTYTFPFILKSCAKISAISE 148
N V WN ++ G S +M+ G + T + C S +
Sbjct: 354 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPS 413
Query: 149 GKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYAS 208
K++H + LK + V + + YA+ G L A+ VF+ + S+ ALI G+A
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 473
Query: 209 RGYLDDARQLFD-EMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSN 267
+D R D + ++ +P+ TV ++LSAC+ + SL LG V I + L +
Sbjct: 474 S---NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 530
Query: 268 LHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQ 327
L V +++ +Y CG+L + LF+++E + ++SWN +I GY AL +FRQM+
Sbjct: 531 LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVL 590
Query: 328 SNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIK 387
I+ ++ + V AC+ L +L LG+ HAY K H ++ + SLIDMYAK G+I
Sbjct: 591 YGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK-HLLEDDAFIACSLIDMYAKNGSIT 649
Query: 388 AAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACN 447
+ +VF+G+ K+ ASWNAMI G +HG A +A+ LF M G PDD+TF+GVL+ACN
Sbjct: 650 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 709
Query: 448 HAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEA-EALLKTMEMKPDAAI 506
H+GL+ G +Y + M + + P L+HY C++D+LGRAG D+A + + M + D I
Sbjct: 710 HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGI 769
Query: 507 WTSLLGACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLND 566
W SLL +CR+H LE+GE VA L ELEPE P YVLLSN+YAG G+W+DV +R R+N+
Sbjct: 770 WKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNE 829
Query: 567 KGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYD 626
++K GCS IE+ V F+VG++ + I + ++ + K G+ PDT V +D
Sbjct: 830 MSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHD 889
Query: 627 MDEEWKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREII 686
+ EE K L HSEKLA+ YGLI T GTTIR+ KNLR+C +CH+A KLISK+ REI+
Sbjct: 890 LSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIV 949
Query: 687 ARDRNRFHHFKDGNCSCNDYW 707
RD RFHHFK+G CSC DYW
Sbjct: 950 VRDNKRFHHFKNGVCSCGDYW 970
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 174/648 (26%), Positives = 303/648 (46%), Gaps = 73/648 (11%)
Query: 20 SSDPPYKLLQNQPSLALLS--KCTNMQNIKQVHSQII-KTGLHNTQFALSKLIEICAVSP 76
SS + L++ L L + K +++ +++H + T L N +++I + A+
Sbjct: 75 SSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCG 134
Query: 77 FGDLSYALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMI-LSGFVPNTYTFPF 135
D S VF+ +R N WN +I +S + ++ ++ MI + +P+ +T+P
Sbjct: 135 SPDDSR--FVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPC 192
Query: 136 ILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRD 195
++K+CA +S + G +H V+K GL D FV +L++ Y +G + A +F+ R+
Sbjct: 193 VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERN 252
Query: 196 AVSYTALITGYASRGYLDDARQLFDEMPIREEN----FVPNESTVVTVLSACAHMGSLEL 251
VS+ ++I ++ G+ +++ L EM EEN F+P+ +T+VTVL CA + L
Sbjct: 253 LVSWNSMIRVFSDNGFSEESFLLLGEM--MEENGDGAFMPDVATLVTVLPVCAREREIGL 310
Query: 252 GNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTH 311
G V L L + NAL+DMYSKCG + A+ +F+ ++V+SWN M+GG++
Sbjct: 311 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 370
Query: 312 TSDYKEALMLFRQMLQ--SNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNN 369
D + RQML +++ ++VT L+ +P C + L K +H Y K N
Sbjct: 371 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 430
Query: 370 VSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIG 429
+ + + + YAKCG++ A++VF G+ KT+ SWNA+I G A +L +M
Sbjct: 431 L-VANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 489
Query: 430 EGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFD 489
GL PD T +LSAC+ L +G++ +I+++ + L Y ++ L G
Sbjct: 490 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVYLSVLSLYIHCGELC 548
Query: 490 EAEALLKTMEMK-----------------PDAAI-----------------WTSLLGACR 515
+AL ME K PD A+ + GAC
Sbjct: 549 TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608
Query: 516 VHGRLELGES----VAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKK 571
+ L LG KHLLE ++ L +MYA G + + L +K
Sbjct: 609 LLPSLRLGREAHAYALKHLLE---DDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST-- 663
Query: 572 VPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPD 619
+ + ++G +H +K ++ +E ++++G PD
Sbjct: 664 ----------ASWNAMIMGYGIHGLAKEAIKLFEE----MQRTGHNPD 697
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 464 bits (1195), Expect = e-130, Method: Compositional matrix adjust.
Identities = 270/774 (34%), Positives = 415/774 (53%), Gaps = 104/774 (13%)
Query: 34 LALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREP 93
L L + T++Q + VH II G L++LI++ S +L+YA +F+ I EP
Sbjct: 21 LCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSS--ELNYARQLFDEISEP 78
Query: 94 NQ---------------------------------VIWNNIIRGHSLSSSPVVAIKFYVR 120
++ V++N +I G S ++ AI + +
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 121 MILSGFVPNTYTFPFILKSCAKISAIS-EGKQIHAHVLKLGLESDPFVHTSLINMYAQNG 179
M GF P+ +TF +L A ++ + Q HA LK G V +L+++Y++
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 180 E----LESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLF----DEMPIREENFVP 231
L SAR VF++ +D S+T ++TGY GY D +L D M + N +
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 232 --------------------------NESTVVTVLSACAHMGSLELGNWVCSLIEGHGLG 265
+E T +V+ ACA G L+LG V + +
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF 318
Query: 266 SNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQM 325
S H N+L+ +Y KCG +AR +FE + +D++SWN ++ GY + EA ++F++M
Sbjct: 319 S-FHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Query: 326 LQSNI-------------------------------EPNDVTFLSVLPACAYLGALDLGK 354
+ NI EP D F + +CA LGA G+
Sbjct: 378 KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 355 WIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMH 414
HA + K +++S +LI MYAKCG ++ A QVF M SWNA+I+ L H
Sbjct: 438 QYHAQLLKIGFD-SSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496
Query: 415 GKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQH 474
G +A+ ++ M+ +G++PD IT + VL+AC+HAGL+D GR+YF++M Y+I P H
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH 556
Query: 475 YGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELE 534
Y ++DLL R+G F +AE++++++ KP A IW +LL CRVHG +ELG A L L
Sbjct: 557 YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLI 616
Query: 535 PENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVH 594
PE+ G Y+LLSNM+A G+W++VA +R + D+G+KK CS IE+ + VH FLV D H
Sbjct: 617 PEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSH 676
Query: 595 PQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEEW-KEGALSHHSEKLAIAYGLISTK 653
P+++ +Y L ++ + + G+VPDTS VL+D++ + KE L+ HSEK+A+A+GL+
Sbjct: 677 PEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLP 736
Query: 654 PGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCNDYW 707
PGTTIRI KNLR CG+CH+ + +S + R+II RDR RFHHF++G CSC ++W
Sbjct: 737 PGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 172 bits (436), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 166/681 (24%), Positives = 274/681 (40%), Gaps = 159/681 (23%)
Query: 127 VPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARL 186
+ N Y L + +++ + +H +++ G + + LI++Y ++ EL AR
Sbjct: 11 IANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQ 70
Query: 187 VFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPI---------------------- 224
+F++ S D ++ T +++GY + G + AR +F++ P+
Sbjct: 71 LFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGY 130
Query: 225 ---------REENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGH------GLGSNLH 269
+ E F P+ T +VL+ A + E ++ H G G
Sbjct: 131 SAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEK-----QCVQFHAAALKSGAGYITS 185
Query: 270 VTNALIDMYSKCGD----LVKARDLFESIEKRDVISW----------------------- 302
V+NAL+ +YSKC L AR +F+ I ++D SW
Sbjct: 186 VSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGM 245
Query: 303 ---------NVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLG 353
N MI GY + Y+EAL + R+M+ S IE ++ T+ SV+ ACA G L LG
Sbjct: 246 DDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG 305
Query: 354 KWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNA------- 406
K +HAY+ + + SL+ +Y KCG A +F+ M K L SWNA
Sbjct: 306 KQVHAYVLRRED--FSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVS 363
Query: 407 ------------------------MISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGV 442
MISGLA +G ++ L LFS M EG +P D F G
Sbjct: 364 SGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGA 423
Query: 443 LSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKP 502
+ +C G G+QY +A + L ++ + + G+ +EA + +TM
Sbjct: 424 IKSCAVLGAYCNGQQY-HAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-L 481
Query: 503 DAAIWTSLLGACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRT 562
D+ W +L+ A HG V + +L+ + P LL+ + A
Sbjct: 482 DSVSWNALIAALGQHGHGAEAVDVYEEMLK-KGIRPDRITLLTVL---------TACSHA 531
Query: 563 RLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSE 622
L D+G K ++ ++ P + H ++D LL +SG D
Sbjct: 532 GLVDQGRKYFDSMETVY------------RIPPGADHYARLID----LLCRSGKFSDAES 575
Query: 623 VLYDMD-----EEWK---EGALSHHSEKLAIA-----YGLISTKPGTTIRIVKNLRVCGN 669
V+ + E W+ G H + +L I +GLI GT + + N
Sbjct: 576 VIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLL-------SN 628
Query: 670 CHSATKLISKIFNREIIARDR 690
H+AT ++ + RDR
Sbjct: 629 MHAATGQWEEVARVRKLMRDR 649
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 463 bits (1192), Expect = e-129, Method: Compositional matrix adjust.
Identities = 247/702 (35%), Positives = 392/702 (55%), Gaps = 49/702 (6%)
Query: 41 TNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNN 100
+N + + +H I+K L + +L + F D + F E V+
Sbjct: 4 SNARKLTTLHGFILKRNLSSFHASLKR---------FSDKKF----FNPNHEDGGVVVER 50
Query: 101 IIRGHSLSSSPVVA-----IKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAH 155
+ R + + V ++ V+++ P T+ +++ C++ A+ EGK++H H
Sbjct: 51 LCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEH 110
Query: 156 VLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDA 215
+ G + L+ MYA+ G L AR VF++ RD S+ ++ GYA G L++A
Sbjct: 111 IRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEA 170
Query: 216 RQLFDEMPIREE------------------------------NFVPNESTVVTVLSACAH 245
R+LFDEM ++ N PN TV ++A A
Sbjct: 171 RKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAA 230
Query: 246 MGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVM 305
+ + G + I GL S+ + ++L+DMY KCG + +AR++F+ I ++DV+SW M
Sbjct: 231 VKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSM 290
Query: 306 IGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQ 365
I Y +S ++E LF +++ S PN+ TF VL ACA L +LGK +H Y+ +
Sbjct: 291 IDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGF 350
Query: 366 KLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFS 425
+ + +SL+DMY KCGNI++A+ V DG L SW ++I G A +G+ D+AL F
Sbjct: 351 DPYSFAS-SSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFD 409
Query: 426 RMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRA 485
++ G +PD +TFV VLSAC HAGL++ G ++F ++ + +++S HY C+VDLL R+
Sbjct: 410 LLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARS 469
Query: 486 GLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPENPGAYVLLS 545
G F++ ++++ M MKP +W S+LG C +G ++L E A+ L ++EPENP YV ++
Sbjct: 470 GRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMA 529
Query: 546 NMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLD 605
N+YA AG+W++ +R R+ + G+ K PG S E+ H F+ D HP I E L
Sbjct: 530 NIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLR 589
Query: 606 EIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNLR 665
E+ +++ G+VP TS VL+D+++E KE L +HSEKLA+A+ ++ST+ GT I++ KNLR
Sbjct: 590 ELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLR 649
Query: 666 VCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCNDYW 707
C +CH A K IS I R+I RD RFH F++G CSC DYW
Sbjct: 650 SCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 462 bits (1190), Expect = e-129, Method: Compositional matrix adjust.
Identities = 270/708 (38%), Positives = 405/708 (57%), Gaps = 20/708 (2%)
Query: 6 SSLTLSPSILHFPPSSDPPYKLLQNQPSLALLSKCTNMQNIKQVHSQIIKTGLHNTQFAL 65
S + +SP SS P Y L + ++ ++VH +I TGL + +
Sbjct: 302 SMIDVSPESYVILLSSFPEYSLAEE----------VGLKKGREVHGHVITTGLVDFMVGI 351
Query: 66 SKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSG 125
+ + + G ++ A VF + + + V WN++I G + + A++ Y M
Sbjct: 352 GNGL-VNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHD 410
Query: 126 FVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESAR 185
+P ++T L SCA + G+QIH LKLG++ + V +L+ +YA+ G L R
Sbjct: 411 ILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECR 470
Query: 186 LVFNKSSLRDAVSYTALITGYA-SRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACA 244
+F+ D VS+ ++I A S L +A F + + N T +VLSA +
Sbjct: 471 KIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCF--LNAQRAGQKLNRITFSSVLSAVS 528
Query: 245 HMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESI-EKRDVISWN 303
+ ELG + L + + NALI Y KCG++ +F + E+RD ++WN
Sbjct: 529 SLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWN 588
Query: 304 VMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKN 363
MI GY H +AL L MLQ+ + + +VL A A + L+ G +HA +
Sbjct: 589 SMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRA 648
Query: 364 HQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSL 423
+ ++V + ++L+DMY+KCG + A + F+ M + SWN+MISG A HG+ ++AL L
Sbjct: 649 CLE-SDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKL 707
Query: 424 FSRMIGEGLQ-PDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLL 482
F M +G PD +TFVGVLSAC+HAGLL+ G ++F +M Y ++P+++H+ CM D+L
Sbjct: 708 FETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVL 767
Query: 483 GRAGLFDEAEALLKTMEMKPDAAIWTSLLGA-CRVHGR-LELGESVAKHLLELEPENPGA 540
GRAG D+ E ++ M MKP+ IW ++LGA CR +GR ELG+ A+ L +LEPEN
Sbjct: 768 GRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVN 827
Query: 541 YVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHI 600
YVLL NMYA GRW+D+ R ++ D +KK G S + + VH F+ GDK HP + I
Sbjct: 828 YVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVI 887
Query: 601 YEMLDEIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIAYGLISTKPGTT-IR 659
Y+ L E++ + +G+VP T LYD+++E KE LS+HSEKLA+A+ L + + T IR
Sbjct: 888 YKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIR 947
Query: 660 IVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCNDYW 707
I+KNLRVCG+CHSA K ISKI R+II RD NRFHHF+DG CSC+D+W
Sbjct: 948 IMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 240/498 (48%), Gaps = 17/498 (3%)
Query: 27 LLQNQPS-LALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPF----GDLS 81
+ NQ + +++L C + ++ + + I + +A+ ++ +S + G +
Sbjct: 98 IFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVG 157
Query: 82 YALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCA 141
YAL F I N V WN+II +S + A + + M G P YTF ++ +
Sbjct: 158 YALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTAC 217
Query: 142 KISA--ISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSY 199
++ + +QI + K GL +D FV + L++ +A++G L AR VFN+ R+AV+
Sbjct: 218 SLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTL 277
Query: 200 TALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLI 259
L+ G + + ++A +LF +M + V ES V+ + S + + E+G +
Sbjct: 278 NGLMVGLVRQKWGEEATKLFMDMNSMID--VSPESYVILLSSFPEYSLAEEVGLKKGREV 335
Query: 260 EGHGLGSNL-----HVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSD 314
GH + + L + N L++MY+KCG + AR +F + +D +SWN MI G
Sbjct: 336 HGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGC 395
Query: 315 YKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWT 374
+ EA+ ++ M + +I P T +S L +CA L LG+ IH K L NVS+
Sbjct: 396 FIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL-NVSVSN 454
Query: 375 SLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKA-DKALSLFSRMIGEGLQ 433
+L+ +YA+ G + ++F M SWN++I LA ++ +A+ F G +
Sbjct: 455 ALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQK 514
Query: 434 PDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEA 493
+ ITF VLSA + ++G+Q +++ I+ + ++ G+ G D E
Sbjct: 515 LNRITFSSVLSAVSSLSFGELGKQIHGLALKN-NIADEATTENALIACYGKCGEMDGCEK 573
Query: 494 LLKTMEMKPDAAIWTSLL 511
+ M + D W S++
Sbjct: 574 IFSRMAERRDNVTWNSMI 591
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 226/496 (45%), Gaps = 16/496 (3%)
Query: 28 LQNQPSLALLSKCTNMQNIKQV-HSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLV 86
+ N L+ + C + + HS++ K L + + LI A GD A V
Sbjct: 1 MTNCVPLSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLIN--AYLETGDSVSARKV 58
Query: 87 FETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAI 146
F+ + N V W I+ G+S + A+ F M+ G N Y F +L++C +I ++
Sbjct: 59 FDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
Query: 147 S--EGKQIHAHVLKLGLESDPFVHTSLINMYAQN-GELESARLVFNKSSLRDAVSYTALI 203
G+QIH + KL D V LI+MY + G + A F ++++VS+ ++I
Sbjct: 119 GILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSII 178
Query: 204 TGYASRGYLDDARQLFDEMPIREENFVPNESTVVT-VLSACAHMG-SLELGNWVCSLIEG 261
+ Y+ G A ++F M + + P E T + V +AC+ + L + I+
Sbjct: 179 SVYSQAGDQRSAFRIFSSM--QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQK 236
Query: 262 HGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALML 321
GL ++L V + L+ ++K G L AR +F +E R+ ++ N ++ G +EA L
Sbjct: 237 SGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKL 296
Query: 322 FRQMLQS-NIEPND-VTFLSVLP--ACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLI 377
F M ++ P V LS P + A L G+ +H ++ V + L+
Sbjct: 297 FMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLV 356
Query: 378 DMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDI 437
+MYAKCG+I A +VF M K SWN+MI+GL +G +A+ + M + P
Sbjct: 357 NMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSF 416
Query: 438 TFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKT 497
T + LS+C +G+Q ++ I + ++ L G +E + +
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLK-LGIDLNVSVSNALMTLYAETGYLNECRKIFSS 475
Query: 498 MEMKPDAAIWTSLLGA 513
M + D W S++GA
Sbjct: 476 MP-EHDQVSWNSIIGA 490
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 196/418 (46%), Gaps = 25/418 (5%)
Query: 152 IHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGY 211
H+ + K L+ D ++ +LIN Y + G+ SAR VF++ LR+ VS+ +++GY+ G
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 212 LDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLEL--GNWVCSLIEGHGLGSNLH 269
+A +M +E N+ V+VL AC +GS+ + G + L+ +
Sbjct: 83 HKEALVFLRDMV--KEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV 140
Query: 270 VTNALIDMYSKC-GDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQS 328
V+N LI MY KC G + A F IE ++ +SWN +I Y+ D + A +F M
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 329 NIEPNDVTFLSVLPACAYLGALD--LGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNI 386
P + TF S++ L D L + I I K+ L ++ + + L+ +AK G++
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGL-LTDLFVGSGLVSAFAKSGSL 259
Query: 387 KAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSAC 446
A +VF+ M + + N ++ GL ++A LF M + ++V +LS+
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSF 318
Query: 447 NHAGL-----LDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMK 501
L L GR+ +I + + +V++ + G +A + M K
Sbjct: 319 PEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK 378
Query: 502 PDAAIWTSLLGACRVHG----RLELGESVAKHLLELEPENPGAYVLLSNMYAGAG-RW 554
D+ W S++ +G +E +S+ +H + PG++ L+S++ + A +W
Sbjct: 379 -DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL-----PGSFTLISSLSSCASLKW 430
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 462 bits (1189), Expect = e-129, Method: Compositional matrix adjust.
Identities = 246/583 (42%), Positives = 352/583 (60%), Gaps = 8/583 (1%)
Query: 125 GFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESA 184
G ++ T+ ++K C A+ EG I H+ G F+ LINMY + L A
Sbjct: 56 GLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDA 115
Query: 185 RLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACA 244
+F++ R+ +S+T +I+ Y+ A +L M +N PN T +VL +C
Sbjct: 116 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLML--RDNVRPNVYTYSSVLRSCN 173
Query: 245 HMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNV 304
M + + + C +I+ GL S++ V +ALID+++K G+ A +F+ + D I WN
Sbjct: 174 GMSDVRMLH--CGIIK-EGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNS 230
Query: 305 MIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNH 364
+IGG+ S AL LF++M ++ T SVL AC L L+LG H +I K
Sbjct: 231 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD 290
Query: 365 QKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLF 424
Q L L +L+DMY KCG+++ A +VF+ M + + +W+ MISGLA +G + +AL LF
Sbjct: 291 QDL---ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLF 347
Query: 425 SRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGR 484
RM G +P+ IT VGVL AC+HAGLL+ G YF +M + Y I P +HYGCM+DLLG+
Sbjct: 348 ERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGK 407
Query: 485 AGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPENPGAYVLL 544
AG D+A LL ME +PDA W +LLGACRV + L E AK ++ L+PE+ G Y LL
Sbjct: 408 AGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLL 467
Query: 545 SNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEML 604
SN+YA + +WD V IRTR+ D+G+KK PGCS IEV +H F++GD HPQ + + L
Sbjct: 468 SNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKL 527
Query: 605 DEIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNL 664
+++ L G+VP+T+ VL D++ E E +L HHSEKLA+A+GL++ IRI KNL
Sbjct: 528 NQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNL 587
Query: 665 RVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCNDYW 707
R+CG+CH KL SK+ R I+ RD R+HHF+DG CSC DYW
Sbjct: 588 RICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 172 bits (436), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 187/374 (50%), Gaps = 49/374 (13%)
Query: 77 FGDLSYALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFI 136
F L+ A +F+ + + N + W +I +S A++ V M+ PN YT+ +
Sbjct: 109 FNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSV 168
Query: 137 LKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDA 196
L+SC + +S+ + +H ++K GLESD FV ++LI+++A+ GE E A VF++ DA
Sbjct: 169 LRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDA 225
Query: 197 VSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVC 256
+ + ++I G+A D A +LF M + F+ ++T+ +VL AC + LELG
Sbjct: 226 IVWNSIIGGFAQNSRSDVALELFKRM--KRAGFIAEQATLTSVLRACTGLALLELG---- 279
Query: 257 SLIEGH----GLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHT 312
++ H +L + NAL+DMY KCG L A +F +++RDVI+W+ MI G
Sbjct: 280 --MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQN 337
Query: 313 SDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSL 372
+EAL LF +M S +PN +T + VL AC++ G L+ G W Y ++ +KL +
Sbjct: 338 GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG-W---YYFRSMKKLYGID- 392
Query: 373 WTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGL 432
+ MI L GK D A+ L + M E
Sbjct: 393 --------------------------PVREHYGCMIDLLGKAGKLDDAVKLLNEMECE-- 424
Query: 433 QPDDITFVGVLSAC 446
PD +T+ +L AC
Sbjct: 425 -PDAVTWRTLLGAC 437
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 184/367 (50%), Gaps = 39/367 (10%)
Query: 35 ALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPN 94
++L C M +++ +H IIK GL + F S LI++ A G+ AL VF+ + +
Sbjct: 167 SVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFA--KLGEPEDALSVFDEMVTGD 224
Query: 95 QVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHA 154
++WN+II G + +S VA++ + RM +GF+ T +L++C ++ + G Q H
Sbjct: 225 AIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHV 284
Query: 155 HVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDD 214
H++K + D ++ +L++MY + G LE A VFN+ RD ++++ +I+G A GY +
Sbjct: 285 HIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQE 342
Query: 215 ARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELG-NWVCSLIEGHGLGSNLHVTNA 273
A +LF+ M + PN T+V VL AC+H G LE G + S+ + +G+
Sbjct: 343 ALKLFERM--KSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGC 400
Query: 274 LIDMYSKCGDLVKARDLFESIE-KRDVISWNVMIGGYTHTSDYKEALMLFRQM------- 325
+ID+ K G L A L +E + D ++W ++G + A +++
Sbjct: 401 MIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPED 460
Query: 326 -----LQSNIEPNDVTFLSV--------------LPACAYLGALDLGKWIHAYI--DKNH 364
L SNI N + SV P C++ +++ K IHA+I D +H
Sbjct: 461 AGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSW---IEVNKQIHAFIIGDNSH 517
Query: 365 QKLNNVS 371
++ VS
Sbjct: 518 PQIVEVS 524
>sp|Q9MAT2|PPR10_ARATH Pentatricopeptide repeat-containing protein At1g04840
OS=Arabidopsis thaliana GN=PCMP-H64 PE=2 SV=1
Length = 665
Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust.
Identities = 254/705 (36%), Positives = 395/705 (56%), Gaps = 60/705 (8%)
Query: 11 SPSILHFPPSSDPPYKLLQNQPS----LALLSKCTNMQNIKQVHSQIIKTGLHNTQFALS 66
SP+ ++FP Q P ++L+ C + +++ VH+QI++ G+ +++ A +
Sbjct: 13 SPAKIYFPADR-------QASPDESHFISLIHACKDTASLRHVHAQILRRGVLSSRVA-A 64
Query: 67 KLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGF 126
+L+ ++ D Y+L +F E N + N +IRG + ++ +++ ++ M+ G
Sbjct: 65 QLVSCSSLLKSPD--YSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGV 122
Query: 127 VPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNGELESARL 186
P+ TFPF+LKS +K+ G+ +HA LK ++ D FV SL++MYA+ G+L+ A
Sbjct: 123 KPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQ 182
Query: 187 VFNKSSLR----DAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSA 242
VF +S R + + LI GY + A LF MP R
Sbjct: 183 VFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNS--------------- 227
Query: 243 CAHMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISW 302
G+W + LI Y G+L +A+ LFE + +++V+SW
Sbjct: 228 ---------GSW-----------------STLIKGYVDSGELNRAKQLFELMPEKNVVSW 261
Query: 303 NVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDK 362
+I G++ T DY+ A+ + +ML+ ++PN+ T +VL AC+ GAL G IH YI
Sbjct: 262 TTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILD 321
Query: 363 NHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALS 422
N KL+ ++ T+L+DMYAKCG + A VF M +K + SW AMI G A+HG+ +A+
Sbjct: 322 NGIKLDR-AIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQ 380
Query: 423 LFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLL 482
F +M+ G +PD++ F+ VL+AC ++ +D+G +F++M DY I P L+HY +VDLL
Sbjct: 381 CFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLL 440
Query: 483 GRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPENPGAYV 542
GRAG +EA L++ M + PD W +L AC+ H ESV+++LLEL+PE G+Y+
Sbjct: 441 GRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYI 500
Query: 543 LLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYE 602
L +A G DV R L + ++ G S IE+ +++F GD H ++ I
Sbjct: 501 FLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGL 560
Query: 603 MLDEIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIAYGLISTKPGTTIRIVK 662
LDEI +L + G+ P ++D++EE KE HSEKLA+ G + T PGTTIRI+K
Sbjct: 561 KLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIK 620
Query: 663 NLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCNDYW 707
NLR+CG+CHS K +SKI R+I+ RD +FHHFKDG CSC DYW
Sbjct: 621 NLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 459 bits (1181), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/662 (37%), Positives = 396/662 (59%), Gaps = 6/662 (0%)
Query: 47 KQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGHS 106
K++H+ ++K+ H+++ + + I + G + A + + + V WN++I+G+
Sbjct: 304 KEIHASVLKSSTHSSELYVCNAL-IAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV 362
Query: 107 LSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPF 166
+ A++F+ MI +G + + I+ + ++S + G ++HA+V+K G +S+
Sbjct: 363 QNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQ 422
Query: 167 VHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIRE 226
V +LI+MY++ F + +D +S+T +I GYA +A +LF + + +
Sbjct: 423 VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRD--VAK 480
Query: 227 ENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVK 286
+ +E + ++L A + + S+ + + I GL + + N L+D+Y KC ++
Sbjct: 481 KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGY 539
Query: 287 ARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAY 346
A +FESI+ +DV+SW MI + EA+ LFR+M+++ + + V L +L A A
Sbjct: 540 ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAAS 599
Query: 347 LGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNA 406
L AL+ G+ IH Y+ + L S+ +++DMYA CG++++A+ VFD + K L + +
Sbjct: 600 LSALNKGREIHCYLLRKGFCLEG-SIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTS 658
Query: 407 MISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDY 466
MI+ MHG A+ LF +M E + PD I+F+ +L AC+HAGLLD GR + M +Y
Sbjct: 659 MINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEY 718
Query: 467 KISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESV 526
++ P +HY C+VD+LGRA EA +K M+ +P A +W +LL ACR H E+GE
Sbjct: 719 ELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIA 778
Query: 527 AKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHE 586
A+ LLELEP+NPG VL+SN++A GRW+DV +R ++ GM+K PGCS IE+ VH+
Sbjct: 779 AQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHK 838
Query: 587 FLVGDKVHPQSKHIYEMLDEIDALLEKS-GFVPDTSEVLYDMDEEWKEGALSHHSEKLAI 645
F DK HP+SK IYE L E+ LE+ G+V DT VL+++DE K L HSE++AI
Sbjct: 839 FTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAI 898
Query: 646 AYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCND 705
AYGL+ T +RI KNLRVC +CH+ KL+SK+F R+I+ RD NRFHHF+ G CSC D
Sbjct: 899 AYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGD 958
Query: 706 YW 707
W
Sbjct: 959 SW 960
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 141/488 (28%), Positives = 252/488 (51%), Gaps = 11/488 (2%)
Query: 34 LALLSKCTNMQNIKQVHSQIIKT-GLHNTQFALSKLIEICAVSPFGDLSYALLVFETIRE 92
L L K + +Q+HS+I KT F KL+ + G L A VF+ + +
Sbjct: 87 LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFM--YGKCGSLDDAEKVFDEMPD 144
Query: 93 PNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQI 152
WN +I + + P A+ Y M + G +FP +LK+CAK+ I G ++
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 153 HAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLR-DAVSYTALITGYASRGY 211
H+ ++KLG S F+ +L++MYA+N +L +AR +F+ + DAV + ++++ Y++ G
Sbjct: 205 HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK 264
Query: 212 LDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWV-CSLIEGHGLGSNLHV 270
+ +LF EM + PN T+V+ L+AC +LG + S+++ S L+V
Sbjct: 265 SLETLELFREMHM--TGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYV 322
Query: 271 TNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNI 330
NALI MY++CG + +A + + DV++WN +I GY YKEAL F M+ +
Sbjct: 323 CNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGH 382
Query: 331 EPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAE 390
+ ++V+ S++ A L L G +HAY+ K H +N+ + +LIDMY+KC
Sbjct: 383 KSDEVSMTSIIAASGRLSNLLAGMELHAYVIK-HGWDSNLQVGNTLIDMYSKCNLTCYMG 441
Query: 391 QVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAG 450
+ F M K L SW +I+G A + +AL LF + + ++ D++ +L A +
Sbjct: 442 RAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLK 501
Query: 451 LLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSL 510
+ I ++ +++ + +Q+ +VD+ G+ A + ++++ K D WTS+
Sbjct: 502 SMLIVKEIHCHILRKGLLDTVIQNE--LVDVYGKCRNMGYATRVFESIKGK-DVVSWTSM 558
Query: 511 LGACRVHG 518
+ + ++G
Sbjct: 559 ISSSALNG 566
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 198/411 (48%), Gaps = 14/411 (3%)
Query: 132 TFPFILKSCAKISAISEGKQIHAHVLKL--GLESDPFVHTSLINMYAQNGELESARLVFN 189
F ++L+ C K A+S+G+Q+H+ + K E D F+ L+ MY + G L+ A VF+
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 190 KSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSL 249
+ R A ++ +I Y S G A L+ M R E S+ +L ACA + +
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNM--RVEGVPLGLSSFPALLKACAKLRDI 198
Query: 250 ELGNWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKARDLFESI-EKRDVISWNVMIGG 308
G+ + SL+ G S + NAL+ MY+K DL AR LF+ EK D + WN ++
Sbjct: 199 RSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSS 258
Query: 309 YTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLN 368
Y+ + E L LFR+M + PN T +S L AC LGK IHA + K+ +
Sbjct: 259 YSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSS 318
Query: 369 NVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMI 428
+ + +LI MY +CG + AE++ M + +WN++I G + +AL FS MI
Sbjct: 319 ELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMI 378
Query: 429 GEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLF 488
G + D+++ +++A L G + +A + + LQ ++D+ + L
Sbjct: 379 AAGHKSDEVSMTSIIAASGRLSNLLAGME-LHAYVIKHGWDSNLQVGNTLIDMYSKCNLT 437
Query: 489 DEAEALLKTMEMKPDAAIWTSLLGA-----CRVHGRLELGESVAKHLLELE 534
M K D WT+++ C V LEL VAK +E++
Sbjct: 438 CYMGRAFLRMHDK-DLISWTTVIAGYAQNDCHVEA-LELFRDVAKKRMEID 486
>sp|Q9LXE8|PP386_ARATH Pentatricopeptide repeat-containing protein At5g15340,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H91 PE=2
SV=1
Length = 623
Score = 457 bits (1177), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/623 (38%), Positives = 373/623 (59%), Gaps = 60/623 (9%)
Query: 135 FILKSCAKISAISEGKQIHAHVLKLGLESDP--FVHTSLINMYAQNGELESARLVFNKSS 192
+L+ CA S + GK++HA + GL+ P ++ +L YA +GE+ +A+ +F++
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP 70
Query: 193 L--RDAVSYTALITGYASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLE 250
L +D V +T L++ ++ G L ++ +LF EM R + ++ +VV + CA + L
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEM--RRKRVEIDDVSVVCLFGVCAKLEDLG 128
Query: 251 LGNWVCSLIEGHGLG------SNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNV 304
+GHG+ +++ V NAL+DMY KCG + + + +FE +E++ V+SW V
Sbjct: 129 FAQ------QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTV 182
Query: 305 -------------------------------MIGGYTHTSDYKEALMLFRQML-QSNIEP 332
M+ GY +E L L +M+ +
Sbjct: 183 VLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGL 242
Query: 333 NDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKL------NNVSLWTSLIDMYAKCGNI 386
N VT S+L ACA G L +G+W+H Y K + ++V + T+L+DMYAKCGNI
Sbjct: 243 NFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNI 302
Query: 387 KAAEQVFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSAC 446
++ VF M + + +WNA+ SGLAMHGK + +F +MI E ++PDD+TF VLSAC
Sbjct: 303 DSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSAC 361
Query: 447 NHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAI 506
+H+G++D G + F+++ + Y + PK+ HY CMVDLLGRAGL +EAE L++ M + P+ +
Sbjct: 362 SHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVV 420
Query: 507 WTSLLGACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLND 566
SLLG+C VHG++E+ E + + L+++ P N +L+SNMY GR D +R L
Sbjct: 421 LGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRK 480
Query: 567 KGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVL-- 624
+G++K+PG SSI V VH F GD+ HP++K IY L+E+ + +G+VPD S ++
Sbjct: 481 RGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSH 540
Query: 625 YDMDEEWKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNRE 684
+ D E KE AL HSEKLA+ +GL+ TKP T + + KNLR+C +CHSA K++SK+++RE
Sbjct: 541 SEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDRE 600
Query: 685 IIARDRNRFHHFKDGNCSCNDYW 707
II RDRNRFH FK G+CSC+DYW
Sbjct: 601 IIIRDRNRFHQFKGGSCSCSDYW 623
Score = 82.8 bits (203), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 143/331 (43%), Gaps = 51/331 (15%)
Query: 34 LALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREP 93
+ + KC + +K++ ++ + + + L +++ + L VF + E
Sbjct: 153 MDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVK------WEGLERGREVFHEMPER 206
Query: 94 NQVIWNNIIRGHSLSSSPVVAIKFYVRMILS-GFVPNTYTFPFILKSCAKISAISEGKQI 152
N V W ++ G+ + ++ M+ G N T +L +CA+ + G+ +
Sbjct: 207 NAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWV 266
Query: 153 HAHVLK----LGLES---DPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITG 205
H + LK +G E+ D V T+L++MYA+ G ++S+ VF R+ V++ AL +G
Sbjct: 267 HVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSG 326
Query: 206 YASRGYLDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLG 265
A G R + D P P++ T VLSAC+H G ++ G W C H L
Sbjct: 327 LAMHG---KGRMVIDMFPQMIREVKPDDLTFTAVLSACSHSGIVDEG-WRCF----HSL- 377
Query: 266 SNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQM 325
+ +D Y+ DL+ L E EA +L R+M
Sbjct: 378 -RFYGLEPKVDHYACMVDLLGRAGLIE------------------------EAEILMREM 412
Query: 326 LQSNIEPNDVTFLSVLPACAYLGALDLGKWI 356
+ PN+V S+L +C+ G +++ + I
Sbjct: 413 ---PVPPNEVVLGSLLGSCSVHGKVEIAERI 440
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 456 bits (1174), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/626 (38%), Positives = 366/626 (58%), Gaps = 37/626 (5%)
Query: 34 LALLSKCTNMQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIREP 93
+++L C KQ+HSQ I G+ KL G +SYA +F I EP
Sbjct: 38 ISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEP 97
Query: 94 NQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKIS-AISEGKQI 152
+ V+WNN+I+G S ++ Y+ M+ G P+++TFPF+L + A++ GK++
Sbjct: 98 DVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKL 157
Query: 153 HAHVLKLGLESDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYL 212
H HV+K GL S+ +V +L+ MY+ G ++ AR VF++ D S+ +I+GY
Sbjct: 158 HCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEY 217
Query: 213 DDARQLFDEMPIREENFV-PNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVT 271
+++ +L EM E N V P T++ VLSAC+ + +L V + +L +
Sbjct: 218 EESIELLVEM---ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLE 274
Query: 272 NALIDMYSKCGDL---------VKARDL----------------------FESIEKRDVI 300
NAL++ Y+ CG++ +KARD+ F+ + RD I
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 334
Query: 301 SWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYI 360
SW +MI GY + E+L +FR+M + + P++ T +SVL ACA+LG+L++G+WI YI
Sbjct: 335 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI 394
Query: 361 DKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLAMHGKADKA 420
DKN K N+V + +LIDMY KCG + A++VF M + +W AM+ GLA +G+ +A
Sbjct: 395 DKNKIK-NDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEA 453
Query: 421 LSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKISPKLQHYGCMVD 480
+ +F +M +QPDDIT++GVLSACNH+G++D R++F M D++I P L HYGCMVD
Sbjct: 454 IKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVD 513
Query: 481 LLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVAKHLLELEPENPGA 540
+LGRAGL EA +L+ M M P++ +W +LLGA R+H + E AK +LELEP+N
Sbjct: 514 MLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAV 573
Query: 541 YVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFLVGDKVHPQSKHI 600
Y LL N+YAG RW D+ +R ++ D +KK PG S IEV HEF+ GDK H QS+ I
Sbjct: 574 YALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEI 633
Query: 601 YEMLDEIDALLEKSGFVPDTSEVLYD 626
Y L+E+ + ++PDTSE+L++
Sbjct: 634 YMKLEELAQESTFAAYLPDTSELLFE 659
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 454 bits (1168), Expect = e-126, Method: Compositional matrix adjust.
Identities = 252/677 (37%), Positives = 391/677 (57%), Gaps = 14/677 (2%)
Query: 36 LLSKCTN---MQNIKQVHSQIIKTGLHNTQFALSKLIEICAVSPFGDLSYALLVFETIRE 92
LL +C + + IK + + ++K+G + + SKL++ A GD+ YA VF+ + E
Sbjct: 71 LLRQCIDERSISGIKTIQAHMLKSGFP-AEISGSKLVD--ASLKCGDIDYARQVFDGMSE 127
Query: 93 PNQVIWNNIIRGHSLSSSPVVAIKFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQI 152
+ V WN++I A++ Y MI + +P+ YT + K+ + +S E ++
Sbjct: 128 RHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRS 187
Query: 153 HAHVLKLGLE-SDPFVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGY 211
H + LGLE S+ FV ++L++MY + G+ A+LV ++ +D V TALI GY+ +G
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGE 247
Query: 212 LDDARQLFDEMPIREENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLGSNLHVT 271
+A + F M + E PNE T +VL +C ++ + G + L+ G S L
Sbjct: 248 DTEAVKAFQSMLV--EKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQ 305
Query: 272 NALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIE 331
+L+ MY +C + + +F+ IE + +SW +I G + AL+ FR+M++ +I+
Sbjct: 306 TSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIK 365
Query: 332 PNDVTFLSVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQ 391
PN T S L C+ L + G+ IH + K + + + LID+Y KCG A
Sbjct: 366 PNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYA-GSGLIDLYGKCGCSDMARL 424
Query: 392 VFDGMGYKTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGL 451
VFD + + S N MI A +G +AL LF RMI GLQP+D+T + VL ACN++ L
Sbjct: 425 VFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRL 484
Query: 452 LDIGRQYFNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLL 511
++ G + F++ +D KI HY CMVDLLGRAG +EAE +L T + PD +W +LL
Sbjct: 485 VEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEAE-MLTTEVINPDLVLWRTLL 542
Query: 512 GACRVHGRLELGESVAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKK 571
AC+VH ++E+ E + + +LE+EP + G +L+SN+YA G+W+ V +++++ D +KK
Sbjct: 543 SACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKK 602
Query: 572 VPGCSSIEVGSVVHEFLVGDKV-HPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEE 630
P S +E+ H F+ GD HP S+ I E L+E+ + G+V D S V DM+E
Sbjct: 603 NPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEET 662
Query: 631 WKEGALSHHSEKLAIAYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDR 690
KE +L HSEKLAIA+ + G +IRI+KNLRVC +CHS K++S++ REII RD
Sbjct: 663 AKERSLHQHSEKLAIAFA-VWRNVGGSIRILKNLRVCVDCHSWIKIVSRVMKREIICRDS 721
Query: 691 NRFHHFKDGNCSCNDYW 707
RFHHF+DG+CSC DYW
Sbjct: 722 KRFHHFRDGSCSCGDYW 738
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 203/400 (50%), Gaps = 20/400 (5%)
Query: 108 SSSPVVAI--KFYVRMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDP 165
+ SP +I +F + I + T+ F +L+ C +IS K I AH+LK G ++
Sbjct: 41 TCSPESSINNQFRLLCITCDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAE- 99
Query: 166 FVHTSLINMYAQNGELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPIR 225
+ L++ + G+++ AR VF+ S R V++ +LI +A +++ M
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMIT- 158
Query: 226 EENFVPNESTVVTVLSACAHMGSLELGNWVCSLIEGHGLG-------SNLHVTNALIDMY 278
N +P+E T+ +V A + + SLE HGL SN+ V +AL+DMY
Sbjct: 159 -NNVLPDEYTLSSVFKAFSDL-SLEK-----EAQRSHGLAVILGLEVSNVFVGSALVDMY 211
Query: 279 SKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFL 338
K G +A+ + + +E++DV+ +I GY+ + EA+ F+ ML ++PN+ T+
Sbjct: 212 VKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYA 271
Query: 339 SVLPACAYLGALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGY 398
SVL +C L + GK IH + K+ + + ++ TSL+ MY +C + + +VF + Y
Sbjct: 272 SVLISCGNLKDIGNGKLIHGLMVKSGFE-SALASQTSLLTMYLRCSLVDDSLRVFKCIEY 330
Query: 399 KTLASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQY 458
SW ++ISGL +G+ + AL F +M+ + ++P+ T L C++ + + GRQ
Sbjct: 331 PNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQ- 389
Query: 459 FNAMIQDYKISPKLQHYGCMVDLLGRAGLFDEAEALLKTM 498
+ ++ Y ++DL G+ G D A + T+
Sbjct: 390 IHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTL 429
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 263,262,917
Number of Sequences: 539616
Number of extensions: 10983110
Number of successful extensions: 37572
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 27810
Number of HSP's gapped (non-prelim): 2178
length of query: 707
length of database: 191,569,459
effective HSP length: 125
effective length of query: 582
effective length of database: 124,117,459
effective search space: 72236361138
effective search space used: 72236361138
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)