Query 043061
Match_columns 299
No_of_seqs 164 out of 1505
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 21:55:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043061.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043061hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jur_A EXO-poly-alpha-D-galact 100.0 8.7E-58 3E-62 434.8 27.2 253 35-299 13-332 (448)
2 1bhe_A PEHA, polygalacturonase 100.0 1.1E-51 3.7E-56 386.7 29.6 244 38-299 4-285 (376)
3 1rmg_A Rgase A, rhamnogalactur 100.0 6.8E-50 2.3E-54 378.8 28.8 234 47-299 18-256 (422)
4 2uvf_A Exopolygalacturonase; G 100.0 9.1E-50 3.1E-54 393.5 26.4 244 43-299 150-471 (608)
5 2iq7_A Endopolygalacturonase; 100.0 6.7E-46 2.3E-50 342.6 24.1 221 63-299 6-236 (339)
6 1czf_A Polygalacturonase II; b 100.0 5.2E-46 1.8E-50 345.5 23.0 227 46-299 26-261 (362)
7 1nhc_A Polygalacturonase I; be 100.0 7.8E-46 2.7E-50 341.7 23.1 221 62-299 5-235 (336)
8 1hg8_A Endopolygalacturonase; 100.0 1.8E-45 6.2E-50 340.7 24.5 222 63-299 6-248 (349)
9 1ia5_A Polygalacturonase; glyc 100.0 2.4E-45 8E-50 338.8 23.8 220 64-299 11-240 (339)
10 1k5c_A Endopolygalacturonase; 100.0 4.9E-46 1.7E-50 342.4 16.8 214 65-299 8-231 (335)
11 2x6w_A Tail spike protein; vir 100.0 4.9E-43 1.7E-47 336.7 9.8 228 46-297 48-320 (600)
12 3gq8_A Preneck appendage prote 100.0 6.5E-40 2.2E-44 316.5 20.2 217 46-299 19-256 (609)
13 3gqn_A Preneck appendage prote 100.0 6.7E-40 2.3E-44 320.9 19.9 217 46-299 19-256 (772)
14 1h80_A IOTA-carrageenase; hydr 100.0 6.3E-34 2.1E-38 270.7 28.5 229 41-296 13-278 (464)
15 1x0c_A Isopullulanase; glycosi 100.0 1.8E-35 6.1E-40 287.3 10.2 216 53-297 146-419 (549)
16 1ogo_X Dextranase; hydrolase, 100.0 4.7E-34 1.6E-38 277.4 15.3 185 80-292 230-446 (574)
17 2vbk_A Tailspike-protein; vira 100.0 1.7E-34 5.9E-39 265.0 9.7 211 47-290 49-286 (514)
18 2pyg_A Poly(beta-D-mannuronate 100.0 1.5E-30 5.2E-35 243.2 20.4 223 49-297 2-279 (377)
19 3eqn_A Glucan 1,3-beta-glucosi 99.9 2.3E-22 7.7E-27 197.4 14.1 221 45-295 45-303 (758)
20 3jur_A EXO-poly-alpha-D-galact 99.8 3.8E-17 1.3E-21 155.3 19.1 150 129-298 190-361 (448)
21 2inu_A Insulin fructotransfera 99.7 2E-16 6.8E-21 145.8 16.6 231 43-295 8-281 (410)
22 2iq7_A Endopolygalacturonase; 99.7 1E-15 3.6E-20 140.8 21.5 172 104-297 67-264 (339)
23 1bhe_A PEHA, polygalacturonase 99.7 4.1E-15 1.4E-19 138.7 25.0 172 104-296 108-311 (376)
24 2uvf_A Exopolygalacturonase; G 99.7 5.1E-16 1.7E-20 153.0 18.7 156 128-298 330-500 (608)
25 1hg8_A Endopolygalacturonase; 99.7 2.9E-15 9.8E-20 138.3 21.5 172 104-297 68-276 (349)
26 1ia5_A Polygalacturonase; glyc 99.7 3.2E-15 1.1E-19 137.5 21.0 172 104-297 71-268 (339)
27 1nhc_A Polygalacturonase I; be 99.7 1.1E-14 3.7E-19 133.8 21.3 170 104-296 67-262 (336)
28 1czf_A Polygalacturonase II; b 99.6 1.7E-14 5.7E-19 133.7 19.7 170 104-296 94-288 (362)
29 1rmg_A Rgase A, rhamnogalactur 99.6 1.1E-13 3.7E-18 130.8 20.3 147 128-297 126-282 (422)
30 1ogo_X Dextranase; hydrolase, 99.6 7.1E-14 2.4E-18 135.9 18.6 187 82-293 265-491 (574)
31 1k5c_A Endopolygalacturonase; 99.6 8.4E-14 2.9E-18 127.7 17.3 170 105-297 66-260 (335)
32 1x0c_A Isopullulanase; glycosi 99.5 7.2E-13 2.5E-17 128.7 16.1 189 82-293 223-456 (549)
33 1h80_A IOTA-carrageenase; hydr 99.4 3.6E-12 1.2E-16 121.2 16.9 126 171-298 106-254 (464)
34 3gq8_A Preneck appendage prote 99.3 2.5E-10 8.6E-15 110.6 19.9 129 128-289 133-274 (609)
35 3gqn_A Preneck appendage prote 99.3 2.1E-10 7.2E-15 113.1 19.0 127 128-287 133-272 (772)
36 1ru4_A Pectate lyase, PEL9A; p 99.2 7.1E-10 2.4E-14 103.8 18.8 203 45-268 12-253 (400)
37 3eqn_A Glucan 1,3-beta-glucosi 99.1 5.8E-10 2E-14 109.9 15.3 66 45-118 396-465 (758)
38 1pcl_A Pectate lyase E; lyase 99.0 3.7E-08 1.3E-12 90.6 18.9 42 167-208 97-153 (355)
39 2pyg_A Poly(beta-D-mannuronate 98.8 6E-08 2E-12 89.9 14.0 110 167-291 174-295 (377)
40 1idk_A Pectin lyase A; signal, 98.8 3.7E-07 1.3E-11 84.0 17.5 63 168-235 126-198 (359)
41 2o04_A Pectate lyase, PL; hexa 98.7 1.1E-07 3.9E-12 88.5 13.9 19 167-186 144-162 (399)
42 1pxz_A Major pollen allergen J 98.7 1.4E-07 4.8E-12 86.5 14.2 129 138-286 88-222 (346)
43 3zsc_A Pectate trisaccharide-l 98.7 4.9E-07 1.7E-11 82.3 17.6 76 167-258 84-160 (340)
44 1dbg_A Chondroitinase B; beta 98.7 2.1E-07 7.1E-12 89.3 15.9 176 64-259 30-240 (506)
45 2qy1_A Pectate lyase II; GAG l 98.7 1E-07 3.6E-12 86.9 13.0 91 167-257 87-202 (330)
46 1qcx_A Pectin lyase B; beta-he 98.7 9.4E-07 3.2E-11 81.3 18.8 63 168-235 126-198 (359)
47 3vmv_A Pectate lyase; polysacc 98.7 3.3E-07 1.1E-11 83.1 14.2 106 137-257 78-202 (326)
48 1pxz_A Major pollen allergen J 98.6 1.9E-06 6.4E-11 79.0 17.2 209 46-290 37-272 (346)
49 1gq8_A Pectinesterase; hydrola 98.5 4.3E-06 1.5E-10 75.7 17.3 147 65-257 19-173 (319)
50 1pe9_A Pectate lyase A; parall 98.5 1.5E-06 5.2E-11 79.9 14.1 42 167-208 104-164 (361)
51 1vbl_A Pectate lyase 47; PL 47 98.5 6.6E-07 2.3E-11 83.7 11.2 41 167-207 149-208 (416)
52 1xg2_A Pectinesterase 1; prote 98.5 4E-06 1.4E-10 75.9 15.3 148 64-257 14-169 (317)
53 2x6w_A Tail spike protein; vir 98.4 3.6E-07 1.2E-11 88.3 7.0 156 104-289 149-343 (600)
54 1air_A Pectate lyase C, PELC; 98.4 4.7E-06 1.6E-10 76.4 13.3 90 167-256 104-212 (353)
55 1air_A Pectate lyase C, PELC; 98.3 1.8E-06 6.1E-11 79.3 10.1 97 189-289 103-215 (353)
56 2x3h_A K5 lyase, K5A lyase; ba 98.3 0.00018 6.1E-09 63.6 21.5 179 46-255 61-257 (542)
57 1qcx_A Pectin lyase B; beta-he 98.2 2.3E-05 7.9E-10 72.0 13.1 146 132-293 126-283 (359)
58 2inu_A Insulin fructotransfera 98.1 2.1E-05 7.2E-10 72.6 12.4 110 174-297 136-261 (410)
59 1vbl_A Pectate lyase 47; PL 47 98.1 3.9E-05 1.3E-09 71.7 14.3 114 167-289 191-333 (416)
60 2nsp_A Pectinesterase A; micha 98.0 2.8E-05 9.5E-10 71.1 11.1 48 60-113 13-61 (342)
61 1idk_A Pectin lyase A; signal, 98.0 4.4E-05 1.5E-09 70.2 12.2 70 189-258 124-198 (359)
62 3uw0_A Pectinesterase; right-h 98.0 7.7E-05 2.6E-09 68.6 13.7 47 61-113 40-87 (364)
63 3vmv_A Pectate lyase; polysacc 97.8 0.00054 1.9E-08 62.0 15.4 182 66-289 29-249 (326)
64 1ru4_A Pectate lyase, PEL9A; p 97.7 7.8E-05 2.7E-09 69.6 8.3 108 167-288 109-229 (400)
65 1pcl_A Pectate lyase E; lyase 97.5 0.0018 6E-08 59.4 14.4 102 189-290 96-228 (355)
66 2qy1_A Pectate lyase II; GAG l 97.4 0.00064 2.2E-08 61.7 9.9 191 64-293 22-253 (330)
67 1pe9_A Pectate lyase A; parall 97.3 0.00096 3.3E-08 61.2 9.0 190 64-289 40-290 (361)
68 1dbg_A Chondroitinase B; beta 97.1 0.0026 8.9E-08 60.9 10.8 62 172-235 250-311 (506)
69 3zsc_A Pectate trisaccharide-l 97.0 0.036 1.2E-06 50.3 16.6 193 67-291 37-251 (340)
70 2vbk_A Tailspike-protein; vira 96.9 0.0032 1.1E-07 58.6 8.7 51 137-208 178-230 (514)
71 2o04_A Pectate lyase, PL; hexa 96.9 0.0025 8.5E-08 59.2 8.0 146 132-289 145-328 (399)
72 3grh_A YBHC, acyl-COA thioeste 96.9 0.043 1.5E-06 51.0 16.1 83 167-257 194-296 (422)
73 3t9g_A Pectate lyase; PL3, par 95.0 0.91 3.1E-05 37.3 14.0 74 175-254 53-126 (196)
74 1gq8_A Pectinesterase; hydrola 93.6 0.38 1.3E-05 43.2 9.7 62 194-258 91-154 (319)
75 1xg2_A Pectinesterase 1; prote 93.4 0.28 9.6E-06 44.0 8.6 62 194-258 87-150 (317)
76 3b4n_A Endo-pectate lyase; pec 93.2 3.2 0.00011 37.0 14.8 85 139-234 124-212 (344)
77 1ee6_A Pectate lyase; parallel 93.1 3.1 0.00011 34.2 14.8 74 174-253 48-121 (197)
78 2nsp_A Pectinesterase A; micha 89.9 2.1 7.3E-05 38.6 10.4 108 169-289 91-230 (342)
79 3t9g_A Pectate lyase; PL3, par 89.1 3.5 0.00012 33.8 9.9 53 197-256 52-105 (196)
80 3ju4_A Endo-N-acetylneuraminid 88.3 0.19 6.4E-06 46.5 2.1 38 55-96 4-42 (670)
81 3uw0_A Pectinesterase; right-h 84.0 7.9 0.00027 35.1 10.6 110 168-289 116-255 (364)
82 1ee6_A Pectate lyase; parallel 83.1 2.7 9.4E-05 34.5 6.4 85 197-289 48-153 (197)
83 3grh_A YBHC, acyl-COA thioeste 68.6 26 0.0009 32.3 9.5 65 193-258 197-277 (422)
84 3b4n_A Endo-pectate lyase; pec 63.0 19 0.00064 32.2 6.9 114 167-283 174-300 (344)
85 3bh7_B Protein XRP2; protein-p 49.8 93 0.0032 27.9 9.5 11 168-178 64-74 (352)
86 3riq_A Tailspike protein; righ 40.2 18 0.00063 33.2 3.2 23 195-221 261-283 (543)
87 2vfm_A Bifunctional tail prote 36.8 29 0.00098 31.3 3.8 35 247-284 317-351 (559)
88 2v5i_A Salmonella typhimurium 36.3 29 0.00099 31.3 3.8 35 247-284 320-354 (559)
89 2yuh_A Tubulin-specific chaper 34.7 31 0.0011 27.7 3.5 11 168-178 71-81 (179)
90 2xc1_A Bifunctional tail prote 29.5 42 0.0014 31.5 3.8 35 247-284 424-458 (666)
91 3bh7_B Protein XRP2; protein-p 27.6 1.2E+02 0.0041 27.2 6.5 11 168-178 102-112 (352)
No 1
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=8.7e-58 Score=434.78 Aligned_cols=253 Identities=30% Similarity=0.476 Sum_probs=230.4
Q ss_pred hhhcCCCCCCCCCeEEEeecCCCCCCC-cccHHHHHHHHHHHhhcCCccEEEecCCeeEEeeeeeeeCCCccceEEEEee
Q 043061 35 RLYGRASAPASSTKIVNVDDFEAKADG-TDDSKAFMEAWEEACSSENEAVLVVPNNKIYHLKPITFSGPCKSDLTMKIYG 113 (299)
Q Consensus 35 ~~~~~~~~~~~~~~~~~v~d~Ga~gdg-~Ddt~Aiq~Ai~~a~~~~gg~~v~iP~G~~Y~~~~l~l~~p~~snvtl~~~g 113 (299)
.++.++.+|.+++++++|++|||+||| +|||+|||+||+ +|++.|+++|+||+| +|+++||.| +++++|+++|
T Consensus 13 ~i~~~~~~p~~~~~~~~v~~~GA~gdg~tddt~Aiq~Ai~-~c~~~ggg~v~vP~G-~yl~~~l~l----~s~v~l~l~g 86 (448)
T 3jur_A 13 EILNHVREPQIPDREVNLLDFGARGDGRTDCSESFKRAIE-ELSKQGGGRLIVPEG-VFLTGPIHL----KSNIELHVKG 86 (448)
T ss_dssp HHHHHCCCCCCCSCEEEGGGGTCCCEEEEECHHHHHHHHH-HHHHHTCEEEEECSS-EEEESCEEC----CTTEEEEESS
T ss_pred HHHhhccCCCCCCcEEEEEecccCCCCCeecHHHHHHHHH-hhhhcCCeEEEECCC-cEEEeeeEe----CCCcEEEEEE
Confidence 466778888899999999999999999 999999999996 566555689999999 999999999 8999999999
Q ss_pred EEEEeeccCCC-CCC-----------CceeEEEeeeecEEEEeceEEeCCC--ccccccccc------------------
Q 043061 114 TIKASVRLSDY-SRD-----------PRHWLVFENVNNFRVEGGGTIDGNG--KVWWRKSCK------------------ 161 (299)
Q Consensus 114 ~l~~~~~~~~~-~~~-----------~~~~i~~~~~~ni~I~G~G~idG~g--~~~w~~~~~------------------ 161 (299)
+|+++.++.+| +.. ..+||++.+++||+|+|.|+|||+| +.||+....
T Consensus 87 tL~~s~d~~~y~p~~~~~~~G~~~~~~~~lI~~~~~~ni~ItG~GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~ 166 (448)
T 3jur_A 87 TIKFIPDPERYLPVVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKK 166 (448)
T ss_dssp EEEECCCGGGGCSCEEEEETTEEEEESCCSEEEESCEEEEEESSCEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHH
T ss_pred EEEecCCHHHhCcccccccccccccCccceEEEeCcEeeEEEEeEEEECCCCchhhhhhcccccccccccccccccchhh
Confidence 99999999988 321 2368999999999999999999999 889974320
Q ss_pred --------------------CCCceeEEEEccCcEEEEeEEEEcCCCceEEEeceeeEEEEeEEEECCCCCCCCCeeeee
Q 043061 162 --------------------VNKSLAVTFYGCKNVRVSSLRFRNSQKMHLTFQYCVNVRALNLLVIAPGNSPNTDGIHVT 221 (299)
Q Consensus 162 --------------------~~~~~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~s~nv~i~~~~I~~~~~~~~~DGi~~~ 221 (299)
..+|.+|.|.+|+|++|++++++|+|+|++++..|+|++|+|++|.++ ++|+||||+.
T Consensus 167 l~~~~~~~~p~~~~~~~~~~~~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~--~~NtDGidi~ 244 (448)
T 3jur_A 167 LKEMAERGTPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPE 244 (448)
T ss_dssp HHHHHHHTCCGGGCBCSTTCCCCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC--STTCCSBCCB
T ss_pred hhhhhcccCcchhhhccccccCCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec--cCCCcccccc
Confidence 235679999999999999999999999999999999999999999997 6899999999
Q ss_pred ceecEEEEeeEEEcCCccEEecCC-----------cEeEEEEeeEE--cCCc-eEEEeecCCCCCcccEEEEEEEeeEEe
Q 043061 222 GTQNILIKNCVIRTGDDCISIVSG-----------SKNVRATDIIC--GPGH-GISIGSLGAGNSEAFVSNVLVNRARLS 287 (299)
Q Consensus 222 ~s~~v~I~n~~i~~gDD~iai~sg-----------s~ni~I~n~~~--~~~~-Gi~igs~~~~~~~~~v~nv~i~n~~~~ 287 (299)
+|++|+|+||+|.+|||||+++++ ++||+|+||+| .++| ||+|||++.++ |+||+|+||+|.
T Consensus 245 ~s~nV~I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~----v~nV~v~n~~~~ 320 (448)
T 3jur_A 245 SCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGG----VRNVVARNNVYM 320 (448)
T ss_dssp SCEEEEEESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTC----EEEEEEESCEEE
T ss_pred CCcCEEEEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCc----EEEEEEEEEEEe
Confidence 999999999999999999999998 89999999999 7787 89999998765 999999999999
Q ss_pred CCceeEEEEecC
Q 043061 288 GTTNGVRIKTWQ 299 (299)
Q Consensus 288 ~~~~gi~ik~~~ 299 (299)
++.+|+|||||+
T Consensus 321 ~t~~GirIKt~~ 332 (448)
T 3jur_A 321 NVERALRLKTNS 332 (448)
T ss_dssp SCSEEEEEECCT
T ss_pred cccceEEEEEEc
Confidence 999999999995
No 2
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=100.00 E-value=1.1e-51 Score=386.68 Aligned_cols=244 Identities=26% Similarity=0.424 Sum_probs=216.3
Q ss_pred cCCCCCCCCCeEEEeecCCCCCCCcccHHHHHHHHHHHhhcCCccEEEecC---CeeEEeeeeeeeCCCccceEEEEee-
Q 043061 38 GRASAPASSTKIVNVDDFEAKADGTDDSKAFMEAWEEACSSENEAVLVVPN---NKIYHLKPITFSGPCKSDLTMKIYG- 113 (299)
Q Consensus 38 ~~~~~~~~~~~~~~v~d~Ga~gdg~Ddt~Aiq~Ai~~a~~~~gg~~v~iP~---G~~Y~~~~l~l~~p~~snvtl~~~g- 113 (299)
.++..|..++ +++|.+||+ +|||+|||+||+ +|++ | ++|++|+ | +|++++|.| +|+++|++++
T Consensus 4 ~~~~~p~~p~-~~~v~~~G~----~~dT~aiq~Ai~-ac~~-G-g~v~~~~~~~g-~yl~g~i~l----~s~vtL~l~~G 70 (376)
T 1bhe_A 4 RTVSEPKTPS-SCTTLKADS----STATSTIQKALN-NCDQ-G-KAVRLSAGSTS-VFLSGPLSL----PSGVSLLIDKG 70 (376)
T ss_dssp SCCCCCCCCC-EEEEEECCS----SBCHHHHHHHHT-TCCT-T-CEEEEECSSSS-EEEESCEEC----CTTCEEEECTT
T ss_pred cccCCCCCCC-eEEECCCCC----CccHHHHHHHHH-Hhcc-C-CcEEEECCCCc-eEEEeEEEE----CCCCEEEECCC
Confidence 4455666666 599999742 899999999996 7876 4 4555554 7 999999999 8999999985
Q ss_pred -EEEEeeccCCCCCC-------------CceeEEEeeeecEEEEeceEEeCCC--------cccccccc-------cCCC
Q 043061 114 -TIKASVRLSDYSRD-------------PRHWLVFENVNNFRVEGGGTIDGNG--------KVWWRKSC-------KVNK 164 (299)
Q Consensus 114 -~l~~~~~~~~~~~~-------------~~~~i~~~~~~ni~I~G~G~idG~g--------~~~w~~~~-------~~~~ 164 (299)
+|+++.++.+|+.. ..+||++.+++||+|+|.|+|||+| +.||+... ...+
T Consensus 71 a~L~~s~~~~~y~~~~~~~g~~~~~g~~~~~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~r 150 (376)
T 1bhe_A 71 VTLRAVNNAKSFENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNT 150 (376)
T ss_dssp CEEEECSCSGGGBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECC
T ss_pred eEEEeCCCHHHCcCCCccccccccCCCCcccEEEEECCEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCC
Confidence 99999998888542 2468999999999999999999998 57897532 1236
Q ss_pred ceeEEEEccCcEEEEeEEEEcCCCceEEEeceeeEEEEeEEEECCCCCCCCCeeeeeceecEEEEeeEEEcCCccEEecC
Q 043061 165 SLAVTFYGCKNVRVSSLRFRNSQKMHLTFQYCVNVRALNLLVIAPGNSPNTDGIHVTGTQNILIKNCVIRTGDDCISIVS 244 (299)
Q Consensus 165 ~~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~s~nv~i~~~~I~~~~~~~~~DGi~~~~s~~v~I~n~~i~~gDD~iai~s 244 (299)
+.+|.|.+|+|++|++++++|+|.|++++..|++++|+|++|.+|.+++|+||||+++|++|+|+||+|.++||||++++
T Consensus 151 p~~i~~~~~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks 230 (376)
T 1bhe_A 151 PRLIQINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKA 230 (376)
T ss_dssp CCSEEEESCEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEE
T ss_pred CeEEEEEcceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeEEEcc
Confidence 67999999999999999999999999999999999999999999998999999999999999999999999999999996
Q ss_pred -----CcEeEEEEeeEEcCCceEEEeecCCCCCcccEEEEEEEeeEEeCCceeEEEEecC
Q 043061 245 -----GSKNVRATDIICGPGHGISIGSLGAGNSEAFVSNVLVNRARLSGTTNGVRIKTWQ 299 (299)
Q Consensus 245 -----gs~ni~I~n~~~~~~~Gi~igs~~~~~~~~~v~nv~i~n~~~~~~~~gi~ik~~~ 299 (299)
+++||+|+||+|.++|||+|||++. .|+||+|+||+|.++.+|+|||||+
T Consensus 231 ~~~~~~s~nI~I~n~~~~~ghGisiGSe~~-----~v~nV~v~n~~~~~t~~GirIKt~~ 285 (376)
T 1bhe_A 231 YKGRAETRNISILHNDFGTGHGMSIGSETM-----GVYNVTVDDLKMNGTTNGLRIKSDK 285 (376)
T ss_dssp CTTSCCEEEEEEEEEEECSSSCEEEEEEES-----SEEEEEEEEEEEESCSEEEEEECCT
T ss_pred cCCCCCceEEEEEeeEEEccccEEeccCCc-----cEeeEEEEeeEEeCCCcEEEEEEec
Confidence 6999999999999999999999976 3999999999999999999999996
No 3
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=100.00 E-value=6.8e-50 Score=378.83 Aligned_cols=234 Identities=24% Similarity=0.422 Sum_probs=208.0
Q ss_pred CeEEEeecCCCCCCC-cccHHHHHHHHHHHhhcCCccEEEecCCeeEEeee-eeeeCCCccceEEEEeeEEEEeeccCCC
Q 043061 47 TKIVNVDDFEAKADG-TDDSKAFMEAWEEACSSENEAVLVVPNNKIYHLKP-ITFSGPCKSDLTMKIYGTIKASVRLSDY 124 (299)
Q Consensus 47 ~~~~~v~d~Ga~gdg-~Ddt~Aiq~Ai~~a~~~~gg~~v~iP~G~~Y~~~~-l~l~~p~~snvtl~~~g~l~~~~~~~~~ 124 (299)
.++++|++|||++|| +|||+|||+||+ +|+. +++|+||+| +|++++ |.|+| .++++|+++|+++...+.
T Consensus 18 ~~~~~V~~~GA~~dg~tddT~Aiq~Ai~-ac~~--g~~V~vP~G-~Yli~~~l~l~g--~s~v~l~l~G~~l~~~~~--- 88 (422)
T 1rmg_A 18 TKTCNILSYGAVADNSTDVGPAITSAWA-ACKS--GGLVYIPSG-NYALNTWVTLTG--GSATAIQLDGIIYRTGTA--- 88 (422)
T ss_dssp HCEEEGGGGTCCCSSSSBCHHHHHHHHH-HHTB--TCEEEECSS-EEEECSCEEEES--CEEEEEEECSEEEECCCC---
T ss_pred CcEEEeeeccccCCCCcccHHHHHHHHH-HCCC--CCEEEECCC-eEEeCCceeecC--CCeEEEEEcCcEEcccCC---
Confidence 569999999999999 999999999996 7764 479999999 999986 99976 489999999988776432
Q ss_pred CCCCceeEEE---eeeecEEEEeceEEeCCCcccccccccCCCceeEEEEccCcEEEEeEEEEcCCCceEEEeceeeEEE
Q 043061 125 SRDPRHWLVF---ENVNNFRVEGGGTIDGNGKVWWRKSCKVNKSLAVTFYGCKNVRVSSLRFRNSQKMHLTFQYCVNVRA 201 (299)
Q Consensus 125 ~~~~~~~i~~---~~~~ni~I~G~G~idG~g~~~w~~~~~~~~~~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~s~nv~i 201 (299)
...|+.+ .++++++|+|.|+|||+|..||.... .++.+|++.+|+|++|++++++|+++|++++..|+|++|
T Consensus 89 ---~~~~~~~~~~~~~~~i~i~G~G~IdG~G~~~w~~~~--~rp~~i~~~~~~nv~I~~iti~nsp~~~i~i~~~~nv~I 163 (422)
T 1rmg_A 89 ---SGNMIAVTDTTDFELFSSTSKGAVQGFGYVYHAEGT--YGARILRLTDVTHFSVHDIILVDAPAFHFTMDTCSDGEV 163 (422)
T ss_dssp ---SSEEEEEEEEEEEEEECSSSCCEEECCTHHHHTTTC--CCCEEEEEEEEEEEEEEEEEEECCSSCSEEEEEEEEEEE
T ss_pred ---CCceEEEEecCceeEEeeccCEEEECCcchhhcCCC--CCceEEEEcccceEEEECeEEECCCceEEEEeCcCCEEE
Confidence 1344544 55666677899999999999997532 267799999999999999999999999999999999999
Q ss_pred EeEEEECCCCCCCCCeeeeeceecEEEEeeEEEcCCccEEecCCcEeEEEEeeEEcCCceEEEeecCCCCCcccEEEEEE
Q 043061 202 LNLLVIAPGNSPNTDGIHVTGTQNILIKNCVIRTGDDCISIVSGSKNVRATDIICGPGHGISIGSLGAGNSEAFVSNVLV 281 (299)
Q Consensus 202 ~~~~I~~~~~~~~~DGi~~~~s~~v~I~n~~i~~gDD~iai~sgs~ni~I~n~~~~~~~Gi~igs~~~~~~~~~v~nv~i 281 (299)
+|++|.+ .+++++||||+.+ ++|+|+||+|.++||||+++++++||+|+||+|.++|||+|||++++ ..|+||+|
T Consensus 164 ~n~~I~~-~d~~ntDGidi~~-~nV~I~n~~i~~gDD~Iai~s~~~nI~I~n~~~~~~~GisIGS~g~~---~~v~nV~v 238 (422)
T 1rmg_A 164 YNMAIRG-GNEGGLDGIDVWG-SNIWVHDVEVTNKDECVTVKSPANNILVESIYCNWSGGCAMGSLGAD---TDVTDIVY 238 (422)
T ss_dssp EEEEEEC-CSSTTCCSEEEEE-EEEEEEEEEEESSSEEEEEEEEEEEEEEEEEEEESSSEEEEEEECTT---EEEEEEEE
T ss_pred EeEEEEC-CCCCCCccEeecC-CeEEEEeeEEeCCCCeEEeCCCCcCEEEEeEEEcCCcceeecccCCC---CcEEEEEE
Confidence 9999999 5668999999999 99999999999999999999999999999999999999999999864 36999999
Q ss_pred EeeEEeCCceeEEEEecC
Q 043061 282 NRARLSGTTNGVRIKTWQ 299 (299)
Q Consensus 282 ~n~~~~~~~~gi~ik~~~ 299 (299)
+||+|.++.+|||||+|.
T Consensus 239 ~n~~~~~~~~Gi~Ikt~~ 256 (422)
T 1rmg_A 239 RNVYTWSSNQMYMIKSNG 256 (422)
T ss_dssp EEEEEESSSCSEEEEEBB
T ss_pred EeEEEeccceEEEEEecC
Confidence 999999999999999983
No 4
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=100.00 E-value=9.1e-50 Score=393.48 Aligned_cols=244 Identities=28% Similarity=0.404 Sum_probs=215.6
Q ss_pred CCCCCeEEEeecCCCCCCC-cccHHHHHHHHHHHhhcCCccEEEecCCeeEEeeeeeeeCCCccceEEEE--eeEEEEee
Q 043061 43 PASSTKIVNVDDFEAKADG-TDDSKAFMEAWEEACSSENEAVLVVPNNKIYHLKPITFSGPCKSDLTMKI--YGTIKASV 119 (299)
Q Consensus 43 ~~~~~~~~~v~d~Ga~gdg-~Ddt~Aiq~Ai~~a~~~~gg~~v~iP~G~~Y~~~~l~l~~p~~snvtl~~--~g~l~~~~ 119 (299)
+.+++..++|++|||+||| +|||+|||+||+ +|+. +++|+||+| +|++++|.| +++++|++ +++|+++.
T Consensus 150 T~~~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~-~c~~--g~~v~vP~G-~y~~g~i~l----ks~v~L~l~~gatL~~s~ 221 (608)
T 2uvf_A 150 TSAKPQIVNVRDFGAIDDGKTLNTKAIQQAID-SCKP--GCRVEIPAG-TYKSGALWL----KSDMTLNLQAGAILLGSE 221 (608)
T ss_dssp CCCCCCEEEGGGGTCCSSSSCCCHHHHHHHHH-TCCT--TEEEEECSE-EEEECCEEC----CSSEEEEECTTEEEEECS
T ss_pred cccCCCEEecccccccCCCCccCHHHHHHHHH-hcCC--CCEEEECCC-ceEecceec----cCceEEEecCCcEEEecC
Confidence 3456779999999999999 999999999995 7765 379999999 999999999 89999999 58999999
Q ss_pred ccCCCCCC-----------CceeEEEee--------eecEEEEeceEEeCCCcccccccc--------------------
Q 043061 120 RLSDYSRD-----------PRHWLVFEN--------VNNFRVEGGGTIDGNGKVWWRKSC-------------------- 160 (299)
Q Consensus 120 ~~~~~~~~-----------~~~~i~~~~--------~~ni~I~G~G~idG~g~~~w~~~~-------------------- 160 (299)
++.+|+.. ..++|...+ ++||+|+|.|+|||+|..||....
T Consensus 222 d~~~y~~~~~~~~~~~~~~~~~lI~~~~~~~~~~g~~~ni~I~G~GtIDG~G~~~~~~~~~~~~~g~~~p~~~~~~~~~~ 301 (608)
T 2uvf_A 222 NPDDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDGNGWLRAKTAEITDELGRSLPQYVASKNSKV 301 (608)
T ss_dssp CGGGSCEEECSSTTCCSCEECCSEEECCSSCCCTTSEEEEEEESSCEEECCCBCEEEEEEEECTTSCEEEEECCCCTTTH
T ss_pred CHHHCcCcceeeeccccccccceEEeeccccccccceeeEEEEeeEEEcCcccccccccccccccccccccccccccccc
Confidence 98888521 124677776 799999999999999988874210
Q ss_pred -------------------------cCCCceeEEEEccCcEEEEeEEEEcCCCceEEEeceeeEEEEeEEEECCCCCCCC
Q 043061 161 -------------------------KVNKSLAVTFYGCKNVRVSSLRFRNSQKMHLTFQYCVNVRALNLLVIAPGNSPNT 215 (299)
Q Consensus 161 -------------------------~~~~~~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~s~nv~i~~~~I~~~~~~~~~ 215 (299)
...++.+|.|.+|+|++|++++|+|+|+|++++..|+|++|+|++|.. .+++|+
T Consensus 302 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~-~~~~Nt 380 (608)
T 2uvf_A 302 HEDGILAKNQVEKAVSDGMDLKNAYGQRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQT-YDANNG 380 (608)
T ss_dssp HHHBSHHHHHHHHHHHTTCCHHHHHHHSSCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEEC-TTCTTC
T ss_pred cccccccccccccccccccccccccccCCCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcC-CCCCCC
Confidence 012567999999999999999999999999999999999999999864 567899
Q ss_pred CeeeeeceecEEEEeeEEEcCCccEEecCC----------cEeEEEEeeEEcCCceE-EEeecCCCCCcccEEEEEEEee
Q 043061 216 DGIHVTGTQNILIKNCVIRTGDDCISIVSG----------SKNVRATDIICGPGHGI-SIGSLGAGNSEAFVSNVLVNRA 284 (299)
Q Consensus 216 DGi~~~~s~~v~I~n~~i~~gDD~iai~sg----------s~ni~I~n~~~~~~~Gi-~igs~~~~~~~~~v~nv~i~n~ 284 (299)
||||+.+|++|+|+||+|.+|||||+++++ ++||+|+||+|.++||+ .|||+..++ |+||+|+||
T Consensus 381 DGidi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~~~~----v~nI~v~n~ 456 (608)
T 2uvf_A 381 DGIEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAW----IEDILAENN 456 (608)
T ss_dssp CSEEEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCCTTC----EEEEEEESC
T ss_pred CeEEecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccCCCC----EEEEEEEeE
Confidence 999999999999999999999999999987 79999999999999985 589986654 999999999
Q ss_pred EEeCCceeEEEEecC
Q 043061 285 RLSGTTNGVRIKTWQ 299 (299)
Q Consensus 285 ~~~~~~~gi~ik~~~ 299 (299)
+|.++.+|||||||+
T Consensus 457 ~~~~t~~GirIKt~~ 471 (608)
T 2uvf_A 457 VMYLTDIGLRAKSTS 471 (608)
T ss_dssp EEESCSEEEEEEEET
T ss_pred EEECCCceEEEeeec
Confidence 999999999999995
No 5
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=100.00 E-value=6.7e-46 Score=342.58 Aligned_cols=221 Identities=25% Similarity=0.430 Sum_probs=195.5
Q ss_pred ccHHHHHHHHHHHhhcCCccEEEecCCeeEEeeee-eeeCCCccceEEEEeeEEEEeeccCCCCCCCceeEEEeeeecEE
Q 043061 63 DDSKAFMEAWEEACSSENEAVLVVPNNKIYHLKPI-TFSGPCKSDLTMKIYGTIKASVRLSDYSRDPRHWLVFENVNNFR 141 (299)
Q Consensus 63 Ddt~Aiq~Ai~~a~~~~gg~~v~iP~G~~Y~~~~l-~l~~p~~snvtl~~~g~l~~~~~~~~~~~~~~~~i~~~~~~ni~ 141 (299)
.||+|||+|++ +|++.++++|+||+| +|+. | .| +++++|+++|++.+. ...|. .+|+.+.+ +||+
T Consensus 6 ~dt~aiq~ai~-~c~~~~g~~v~vP~G-~~~~--l~~l----~~~~~l~~~g~~~~~--~~~w~---g~~i~~~~-~nv~ 71 (339)
T 2iq7_A 6 TDAAAAIKGKA-SCTSIILNGIVVPAG-TTLD--MTGL----KSGTTVTFQGKTTFG--YKEWE---GPLISFSG-TNIN 71 (339)
T ss_dssp SCHHHHHHHGG-GCSEEEEESCEECTT-CCEE--ECSC----CTTCEEEEESEEEEC--CCCSC---CCSEEEEE-ESCE
T ss_pred CCHHHHHHHHH-HhhccCCCeEEECCC-EEEE--eecc----CCCeEEEEeCcEEcc--ccccc---CcEEEEEc-ccEE
Confidence 57999999995 787766689999999 8863 3 44 789999999988864 35563 35787766 9999
Q ss_pred EEec--eEEeCCCccccccccc---CCCceeEEEEccCcEEEEeEEEEcCCCceEEEeceeeEEEEeEEEECCCC----C
Q 043061 142 VEGG--GTIDGNGKVWWRKSCK---VNKSLAVTFYGCKNVRVSSLRFRNSQKMHLTFQYCVNVRALNLLVIAPGN----S 212 (299)
Q Consensus 142 I~G~--G~idG~g~~~w~~~~~---~~~~~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~s~nv~i~~~~I~~~~~----~ 212 (299)
|+|. |+|||+|+.||+.... ..+|.+|.|.+|+|++|++++++|+|+|++++..|++++|+|++|.++.+ +
T Consensus 72 I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~ 151 (339)
T 2iq7_A 72 INGASGHSIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDVIIDNSAGDSAGG 151 (339)
T ss_dssp EEECTTCEEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEESCEEECGGGGGTTC
T ss_pred EEcCCCCEEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEEEEEECCccccccC
Confidence 9997 7999999999976432 34567999999999999999999999999999999999999999999753 7
Q ss_pred CCCCeeeeeceecEEEEeeEEEcCCccEEecCCcEeEEEEeeEEcCCceEEEeecCCCCCcccEEEEEEEeeEEeCCcee
Q 043061 213 PNTDGIHVTGTQNILIKNCVIRTGDDCISIVSGSKNVRATDIICGPGHGISIGSLGAGNSEAFVSNVLVNRARLSGTTNG 292 (299)
Q Consensus 213 ~~~DGi~~~~s~~v~I~n~~i~~gDD~iai~sgs~ni~I~n~~~~~~~Gi~igs~~~~~~~~~v~nv~i~n~~~~~~~~g 292 (299)
+|+||||+.+|++|+|+||+|.++||||+++++ +||+|+||+|.++|||+|||++.+ +...|+||+|+||+|.++.+|
T Consensus 152 ~ntDGid~~~s~nV~I~n~~i~~gDDciaiksg-~nI~i~n~~~~~ghGisiGSlg~~-~~~~v~nV~v~n~~~~~~~~g 229 (339)
T 2iq7_A 152 HNTDAFDVGSSTGVYISGANVKNQDDCLAINSG-TNITFTGGTCSGGHGLSIGSVGGR-SDNTVKTVTISNSKIVNSDNG 229 (339)
T ss_dssp CSCCSEEEESCEEEEEESCEEECSSCSEEESSE-EEEEEESCEEESSCCEEEEEESSS-SCCEEEEEEEEEEEEESCSEE
T ss_pred CCCCcEEEcCcceEEEEecEEecCCCEEEEcCC-ccEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEECCCcE
Confidence 999999999999999999999999999999995 999999999999999999998765 557899999999999999999
Q ss_pred EEEEecC
Q 043061 293 VRIKTWQ 299 (299)
Q Consensus 293 i~ik~~~ 299 (299)
+|||+|+
T Consensus 230 irIkt~~ 236 (339)
T 2iq7_A 230 VRIKTVS 236 (339)
T ss_dssp EEEEEET
T ss_pred EEEEEeC
Confidence 9999996
No 6
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=5.2e-46 Score=345.54 Aligned_cols=227 Identities=23% Similarity=0.362 Sum_probs=197.4
Q ss_pred CCeEEEeecCCCCCCCcccHHHHHHHHHHHhhcCCccEEEecCCeeEEeeee-eeeCCCccceEEEEeeEEEEeeccCCC
Q 043061 46 STKIVNVDDFEAKADGTDDSKAFMEAWEEACSSENEAVLVVPNNKIYHLKPI-TFSGPCKSDLTMKIYGTIKASVRLSDY 124 (299)
Q Consensus 46 ~~~~~~v~d~Ga~gdg~Ddt~Aiq~Ai~~a~~~~gg~~v~iP~G~~Y~~~~l-~l~~p~~snvtl~~~g~l~~~~~~~~~ 124 (299)
..++++|++ ++|||+|++ +|+..++++|+||+| +|+. | .| +++++|+++|++.+. ...|
T Consensus 26 ~~~~Ctv~~----------~~aiq~ai~-~c~~~~g~~v~vP~G-~~l~--l~~l----~~~~~l~~~g~~~~~--~~~w 85 (362)
T 1czf_A 26 ARDSCTFTT----------AAAAKAGKA-KCSTITLNNIEVPAG-TTLD--LTGL----TSGTKVIFEGTTTFQ--YEEW 85 (362)
T ss_dssp --CEEEESS----------HHHHHHHGG-GCSEEEEESCEECTT-CCEE--ECSC----CTTCEEEEESEEEEC--CCCS
T ss_pred CCCEEEECC----------HHHHHHHHH-HhhccCCCEEEECCC-EEEE--eecc----CCCeEEEEeCcEEec--cccC
Confidence 345677766 789999994 787666689999999 7763 3 34 679999999998874 3556
Q ss_pred CCCCceeEEEeeeecEEEEe--ceEEeCCCcccccccc--cCCCceeEEEEccCcEEEEeEEEEcCCCceEEEeceeeEE
Q 043061 125 SRDPRHWLVFENVNNFRVEG--GGTIDGNGKVWWRKSC--KVNKSLAVTFYGCKNVRVSSLRFRNSQKMHLTFQYCVNVR 200 (299)
Q Consensus 125 ~~~~~~~i~~~~~~ni~I~G--~G~idG~g~~~w~~~~--~~~~~~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~s~nv~ 200 (299)
. .+|+.+. .+||+|+| .|+|||+|+.||+... ...+|.+|+|.+|+|++|++++++|+|+|++++. |+|++
T Consensus 86 ~---g~~i~~~-~~nv~I~G~~~g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp~~~i~i~-~~nv~ 160 (362)
T 1czf_A 86 A---GPLISMS-GEHITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTPLMAFSVQ-ANDIT 160 (362)
T ss_dssp C---CCSEEEE-EESCEEEECTTCEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCSSCCEEEE-CSSEE
T ss_pred C---CcEEEEe-CccEEEEcCCCcEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCCccEEEEe-eCCEE
Confidence 3 3678875 49999999 6999999999998643 2446779999999999999999999999999999 99999
Q ss_pred EEeEEEECCCC----CCCCCeeeeeceecEEEEeeEEEcCCccEEecCCcEeEEEEeeEEcCCceEEEeecCCCCCcccE
Q 043061 201 ALNLLVIAPGN----SPNTDGIHVTGTQNILIKNCVIRTGDDCISIVSGSKNVRATDIICGPGHGISIGSLGAGNSEAFV 276 (299)
Q Consensus 201 i~~~~I~~~~~----~~~~DGi~~~~s~~v~I~n~~i~~gDD~iai~sgs~ni~I~n~~~~~~~Gi~igs~~~~~~~~~v 276 (299)
|+|++|.++.+ ++|+||||+.+|++|+|+||++.++||||+++++ +||+|+||+|.++|||+|||+|.+ +...|
T Consensus 161 i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghGisiGS~G~~-~~~~v 238 (362)
T 1czf_A 161 FTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNSG-ENIWFTGGTCIGGHGLSIGSVGDR-SNNVV 238 (362)
T ss_dssp EESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESSE-EEEEEESCEEESSCCEEEEEECSS-SCCEE
T ss_pred EEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeCC-eEEEEEEEEEeCCceeEEeecccc-CCCCE
Confidence 99999999743 7999999999999999999999999999999996 999999999999999999999765 45789
Q ss_pred EEEEEEeeEEeCCceeEEEEecC
Q 043061 277 SNVLVNRARLSGTTNGVRIKTWQ 299 (299)
Q Consensus 277 ~nv~i~n~~~~~~~~gi~ik~~~ 299 (299)
+||+|+||+|.++.+|+|||+|+
T Consensus 239 ~nV~v~n~~~~~t~~GirIKt~~ 261 (362)
T 1czf_A 239 KNVTIEHSTVSNSENAVRIKTIS 261 (362)
T ss_dssp EEEEEEEEEEEEEEEEEEEEEET
T ss_pred EEEEEEeeEEECCceEEEEEEeC
Confidence 99999999999999999999996
No 7
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=7.8e-46 Score=341.75 Aligned_cols=221 Identities=24% Similarity=0.419 Sum_probs=194.6
Q ss_pred cccHHHHHHHHHHHhhcCCccEEEecCCeeEEeeee-eeeCCCccceEEEEeeEEEEeeccCCCCCCCceeEEEeeeecE
Q 043061 62 TDDSKAFMEAWEEACSSENEAVLVVPNNKIYHLKPI-TFSGPCKSDLTMKIYGTIKASVRLSDYSRDPRHWLVFENVNNF 140 (299)
Q Consensus 62 ~Ddt~Aiq~Ai~~a~~~~gg~~v~iP~G~~Y~~~~l-~l~~p~~snvtl~~~g~l~~~~~~~~~~~~~~~~i~~~~~~ni 140 (299)
..||+|||+|++ +|++.++++|+||+| +|+. | .| +++++|+++|++.+. ...|. .+|+.+. .+||
T Consensus 5 ~~~t~aiq~ai~-~c~~~gg~~v~vP~G-~~~~--l~~l----~~~~~l~~~g~~~~~--~~~w~---g~li~~~-~~nv 70 (336)
T 1nhc_A 5 FTSASEASESIS-SCSDVVLSSIEVPAG-ETLD--LSDA----ADGSTITFEGTTSFG--YKEWK---GPLIRFG-GKDL 70 (336)
T ss_dssp ESSHHHHHHHGG-GCSEEEEESCEECTT-CCEE--CTTC----CTTCEEEEESEEEEC--CCCSC---CCSEECC-EESC
T ss_pred ECCHHHHHHHHH-HhhccCCCeEEECCC-EEEE--eecc----CCCeEEEEeceEEcc--ccccc---CcEEEEe-cCCE
Confidence 457999999995 787766689999999 8762 3 44 689999999998864 34563 3577775 4999
Q ss_pred EEEec--eEEeCCCccccccccc---CCCceeEEEEccCcEEEEeEEEEcCCCceEEEeceeeEEEEeEEEECCCC----
Q 043061 141 RVEGG--GTIDGNGKVWWRKSCK---VNKSLAVTFYGCKNVRVSSLRFRNSQKMHLTFQYCVNVRALNLLVIAPGN---- 211 (299)
Q Consensus 141 ~I~G~--G~idG~g~~~w~~~~~---~~~~~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~s~nv~i~~~~I~~~~~---- 211 (299)
+|+|. |+|||+|+.||+.... ..+|.+|.|.+|+|++|++++++|+|+|++++. |++++|+|++|.++.+
T Consensus 71 ~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~ 149 (336)
T 1nhc_A 71 TVTMADGAVIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNVHLNDFTIDNSDGDDNG 149 (336)
T ss_dssp EEEECTTCEEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEE-EEEEEEESCEEECTTHHHHT
T ss_pred EEEcCCCeEEECCccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCEEEEEEEEECCCccccc
Confidence 99996 7999999999986532 345678999999999999999999999999999 9999999999999854
Q ss_pred CCCCCeeeeeceecEEEEeeEEEcCCccEEecCCcEeEEEEeeEEcCCceEEEeecCCCCCcccEEEEEEEeeEEeCCce
Q 043061 212 SPNTDGIHVTGTQNILIKNCVIRTGDDCISIVSGSKNVRATDIICGPGHGISIGSLGAGNSEAFVSNVLVNRARLSGTTN 291 (299)
Q Consensus 212 ~~~~DGi~~~~s~~v~I~n~~i~~gDD~iai~sgs~ni~I~n~~~~~~~Gi~igs~~~~~~~~~v~nv~i~n~~~~~~~~ 291 (299)
++|+||||+.+|++|+|+||+|.++||||+++++ +||+|+||+|.++|||+|||++.+ +...|+||+|+||+|.++.+
T Consensus 150 ~~ntDGidi~~s~nV~I~n~~i~~gDDciaiksg-~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~~t~~ 227 (336)
T 1nhc_A 150 GHNTDGFDISESTGVYISGATVKNQDDCIAINSG-ESISFTGGTCSGGHGLSIGSVGGR-DDNTVKNVTISDSTVSNSAN 227 (336)
T ss_dssp CCSCCSEEECSCEEEEEESCEEESSSEEEEESSE-EEEEEESCEEESSSEEEEEEESSS-SCCEEEEEEEEEEEEESCSE
T ss_pred CCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeCC-eEEEEEeEEEECCcCceEccCccc-cCCCEEEEEEEeeEEECCCc
Confidence 7999999999999999999999999999999995 999999999999999999998765 55789999999999999999
Q ss_pred eEEEEecC
Q 043061 292 GVRIKTWQ 299 (299)
Q Consensus 292 gi~ik~~~ 299 (299)
|+|||+|+
T Consensus 228 girIkt~~ 235 (336)
T 1nhc_A 228 GVRIKTIY 235 (336)
T ss_dssp EEEEEEET
T ss_pred EEEEEEEC
Confidence 99999996
No 8
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=100.00 E-value=1.8e-45 Score=340.68 Aligned_cols=222 Identities=23% Similarity=0.410 Sum_probs=193.7
Q ss_pred ccHHHHHHHHHHHhhcCCccEEEecCCeeEEeeee-eeeCCCccceEEEEeeEEEEeeccCCCCCCCceeEEEeeeecEE
Q 043061 63 DDSKAFMEAWEEACSSENEAVLVVPNNKIYHLKPI-TFSGPCKSDLTMKIYGTIKASVRLSDYSRDPRHWLVFENVNNFR 141 (299)
Q Consensus 63 Ddt~Aiq~Ai~~a~~~~gg~~v~iP~G~~Y~~~~l-~l~~p~~snvtl~~~g~l~~~~~~~~~~~~~~~~i~~~~~~ni~ 141 (299)
.||+|||+|++ +|++.++++|+||+| +|+. | .| +++++|+++|++++.. ..|.. .+|+.+.+ +||+
T Consensus 6 ~~t~aiq~ai~-~c~~~gg~~v~vP~G-~~l~--l~~l----~~~~~l~~~g~~~~~~--~~w~~--g~~i~~~~-~ni~ 72 (349)
T 1hg8_A 6 TEYSGLATAVS-SCKNIVLNGFQVPTG-KQLD--LSSL----QNDSTVTFKGTTTFAT--TADND--FNPIVISG-SNIT 72 (349)
T ss_dssp SSGGGHHHHHH-HCSEEEECCCEECTT-CCEE--ETTC----CTTCEEEECSEEEECC--CCCTT--CCSEEEEE-ESCE
T ss_pred CCHHHHHHHHH-hccccCCCEEEECCC-EEEE--eecc----CCCeEEEEcCceeccc--ccccC--CceEEEEC-ccEE
Confidence 37899999995 687756679999999 8874 3 34 6799999999887642 45622 36788855 9999
Q ss_pred EEe--ceEEeCCCcccccccccC----CCceeEEE-E-ccCcEEEEeEEEEcCCCceEEEeceeeEEEEeEEEECCC-C-
Q 043061 142 VEG--GGTIDGNGKVWWRKSCKV----NKSLAVTF-Y-GCKNVRVSSLRFRNSQKMHLTFQYCVNVRALNLLVIAPG-N- 211 (299)
Q Consensus 142 I~G--~G~idG~g~~~w~~~~~~----~~~~~i~~-~-~~~nv~I~~v~i~ns~~~~i~~~~s~nv~i~~~~I~~~~-~- 211 (299)
|+| .|+|||+|+.||+..... .+|.+|.| . .|+|++|++++++|+|+|++++..|++++|+|++|.++. +
T Consensus 73 I~G~~~G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~~~ 152 (349)
T 1hg8_A 73 ITGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQLTISGLILDNRAGDK 152 (349)
T ss_dssp EEECTTCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCSSEEEEEESCEEEEEEEEEEECGGGSS
T ss_pred EEecCCCEEcCCcchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCEEEEEEEEECCCCcc
Confidence 999 699999999999865432 46668999 7 899999999999999999999999999999999999863 3
Q ss_pred ----------CCCCCeeeeeceecEEEEeeEEEcCCccEEecCCcEeEEEEeeEEcCCceEEEeecCCCCCcccEEEEEE
Q 043061 212 ----------SPNTDGIHVTGTQNILIKNCVIRTGDDCISIVSGSKNVRATDIICGPGHGISIGSLGAGNSEAFVSNVLV 281 (299)
Q Consensus 212 ----------~~~~DGi~~~~s~~v~I~n~~i~~gDD~iai~sgs~ni~I~n~~~~~~~Gi~igs~~~~~~~~~v~nv~i 281 (299)
++|+||||+.+|++|+|+||++.++||||+++++ +||+|+||+|.++|||+|||+|.+ +...|+||+|
T Consensus 153 ~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghGisiGS~G~~-~~~~v~nV~v 230 (349)
T 1hg8_A 153 PNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTSG-TNIVVSNMYCSGGHGLSIGSVGGK-SDNVVDGVQF 230 (349)
T ss_dssp CCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESSE-EEEEEEEEEEESSCCEEEEEESSS-SCCEEEEEEE
T ss_pred ccccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeCC-eEEEEEeEEEeCCcceEEcccccc-ccCCEEEEEE
Confidence 5899999999999999999999999999999995 999999999999999999999765 5678999999
Q ss_pred EeeEEeCCceeEEEEecC
Q 043061 282 NRARLSGTTNGVRIKTWQ 299 (299)
Q Consensus 282 ~n~~~~~~~~gi~ik~~~ 299 (299)
+||+|.++.+|+|||+|+
T Consensus 231 ~n~~~~~~~~GirIKt~~ 248 (349)
T 1hg8_A 231 LSSQVVNSQNGCRIKSNS 248 (349)
T ss_dssp EEEEEEEEEEEEEEEEET
T ss_pred EEEEEECCCcEEEEEecC
Confidence 999999999999999996
No 9
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=100.00 E-value=2.4e-45 Score=338.82 Aligned_cols=220 Identities=22% Similarity=0.360 Sum_probs=194.0
Q ss_pred cHHHHHHHHHHHhhcCCccEEEecCCeeEEeeee-eeeCCCccceEEEEeeEEEEeeccCCCCCCCceeEEEeeeecEEE
Q 043061 64 DSKAFMEAWEEACSSENEAVLVVPNNKIYHLKPI-TFSGPCKSDLTMKIYGTIKASVRLSDYSRDPRHWLVFENVNNFRV 142 (299)
Q Consensus 64 dt~Aiq~Ai~~a~~~~gg~~v~iP~G~~Y~~~~l-~l~~p~~snvtl~~~g~l~~~~~~~~~~~~~~~~i~~~~~~ni~I 142 (299)
-++|||+|+ ++|++.++++|+||+| +|+. | .| +++++|+++|++++. ...|. .+|+.+.+ +||+|
T Consensus 11 g~~aiq~ai-~~c~~~gg~~v~vP~G-~~l~--l~~l----~~~~~l~~~g~~~~~--~~~w~---g~li~~~~-~nv~I 76 (339)
T 1ia5_A 11 GASSASKSK-TSCSTIVLSNVAVPSG-TTLD--LTKL----NDGTHVIFSGETTFG--YKEWS---GPLISVSG-SDLTI 76 (339)
T ss_dssp HHHHHHHHG-GGCSEEEEESCEECTT-CCEE--ECSC----CTTCEEEEESEEEEC--CCCSC---CCSEEEEE-ESCEE
T ss_pred chHHHHHHH-HHhhccCCCeEEECCC-EEEE--eecc----CCCeEEEEeCcEEcc--ccccc---CcEEEEEc-CcEEE
Confidence 367999999 4787766689999999 8863 3 44 789999999988864 35563 36788765 99999
Q ss_pred Eec--eEEeCCCccccccccc---CCCceeEEEEccCcEEEEeEEEEcCCCceEEEeceeeEEEEeEEEECCCC----CC
Q 043061 143 EGG--GTIDGNGKVWWRKSCK---VNKSLAVTFYGCKNVRVSSLRFRNSQKMHLTFQYCVNVRALNLLVIAPGN----SP 213 (299)
Q Consensus 143 ~G~--G~idG~g~~~w~~~~~---~~~~~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~s~nv~i~~~~I~~~~~----~~ 213 (299)
+|. |+|||+|+.||+.... ..+|.+|.|.+|+|++|++++++|+|+|++++..|++++|+|++|.++.+ ++
T Consensus 77 ~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ 156 (339)
T 1ia5_A 77 TGASGHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDITIDNSDGDDNGGH 156 (339)
T ss_dssp EECTTCEEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEEESCEEECGGGTTTTCC
T ss_pred EcCCCeEEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCCcceEEEecccCeEEeeEEEECCccccccCC
Confidence 996 7999999999986432 34567999999999999999999999999999999999999999999743 78
Q ss_pred CCCeeeeeceecEEEEeeEEEcCCccEEecCCcEeEEEEeeEEcCCceEEEeecCCCCCcccEEEEEEEeeEEeCCceeE
Q 043061 214 NTDGIHVTGTQNILIKNCVIRTGDDCISIVSGSKNVRATDIICGPGHGISIGSLGAGNSEAFVSNVLVNRARLSGTTNGV 293 (299)
Q Consensus 214 ~~DGi~~~~s~~v~I~n~~i~~gDD~iai~sgs~ni~I~n~~~~~~~Gi~igs~~~~~~~~~v~nv~i~n~~~~~~~~gi 293 (299)
|+||||+.+|++|+|+||+|.++||||+++++ +||+|+||+|.++|||+|||++.+ +...|+||+|+||+|.++.+||
T Consensus 157 ntDGid~~~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~~t~~gi 234 (339)
T 1ia5_A 157 NTDAFDIGTSTYVTISGATVYNQDDCVAVNSG-ENIYFSGGYCSGGHGLSIGSVGGR-SDNTVKNVTFVDSTIINSDNGV 234 (339)
T ss_dssp SCCSEEEESCEEEEEESCEEECSSCSEEESSE-EEEEEESCEEESSSCEEEEEECSS-SCCEEEEEEEEEEEEESCSEEE
T ss_pred CCCcEEecCCceEEEEeeEEEcCCCeEEEeCC-eEEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEECCCcEE
Confidence 99999999999999999999999999999995 999999999999999999998765 5578999999999999999999
Q ss_pred EEEecC
Q 043061 294 RIKTWQ 299 (299)
Q Consensus 294 ~ik~~~ 299 (299)
|||+|+
T Consensus 235 rIKt~~ 240 (339)
T 1ia5_A 235 RIKTNI 240 (339)
T ss_dssp EEEEET
T ss_pred EEEEeC
Confidence 999996
No 10
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=100.00 E-value=4.9e-46 Score=342.40 Aligned_cols=214 Identities=24% Similarity=0.380 Sum_probs=190.6
Q ss_pred HHHHHHHHHHHhhcCCccEEEecCCeeEEeeeeeeeCCCccceEEEEeeEEEEeeccCCCCCCCceeEEEeeeecEEEEe
Q 043061 65 SKAFMEAWEEACSSENEAVLVVPNNKIYHLKPITFSGPCKSDLTMKIYGTIKASVRLSDYSRDPRHWLVFENVNNFRVEG 144 (299)
Q Consensus 65 t~Aiq~Ai~~a~~~~gg~~v~iP~G~~Y~~~~l~l~~p~~snvtl~~~g~l~~~~~~~~~~~~~~~~i~~~~~~ni~I~G 144 (299)
++|||+ + ++|++.++++|+||+| +|+ .|.| +++++|+++|++++. ...|. .+|+.+. .+||+|+|
T Consensus 8 ~~aiq~-i-~aC~~~gg~~v~vP~G-~~l--~l~l----~~~~~l~~~g~~~~~--~~~w~---~~~i~~~-~~ni~I~G 72 (335)
T 1k5c_A 8 VDDAKD-I-AGCSAVTLNGFTVPAG-NTL--VLNP----DKGATVTMAGDITFA--KTTLD---GPLFTID-GTGINFVG 72 (335)
T ss_dssp TTGGGG-C-TTCSEEEECCEEECTT-CCE--EECC----CTTCEEEECSCEEEC--CCCSC---SCSEEEE-EEEEEEEC
T ss_pred HHHhHH-H-HhcccCCCCEEEECCC-EEE--EEEe----CCCeEEEEeccEecc--ccccc---CcEEEEE-ccCEEEEe
Confidence 689999 8 5788777789999999 776 3445 899999999998874 35563 3688886 59999999
Q ss_pred -ceEEeCCCccccccccc---CCCceeEEEEccCcEEEEeEEEEcCCCceEEEeceee-EEEEeEEEECCCC-----CCC
Q 043061 145 -GGTIDGNGKVWWRKSCK---VNKSLAVTFYGCKNVRVSSLRFRNSQKMHLTFQYCVN-VRALNLLVIAPGN-----SPN 214 (299)
Q Consensus 145 -~G~idG~g~~~w~~~~~---~~~~~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~s~n-v~i~~~~I~~~~~-----~~~ 214 (299)
.|+|||+|+.||+.... ..+|.+|.|..|+ ++|++++++|+|+|++++..|++ |+|+|++|.++.+ ++|
T Consensus 73 ~~G~idG~G~~ww~~~~~~~~~~rP~~i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~N 151 (335)
T 1k5c_A 73 ADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDDFAGDTKNLGHN 151 (335)
T ss_dssp TTCEEECCGGGTCCSCTTTSSSCCCCCSEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEESCEEECGGGGGGGCCCS
T ss_pred CccEEcCChhHhhhcccccCCCCCCeEEEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEEEEEEECCCCcccccCCC
Confidence 69999999999986532 3467799999999 99999999999999999999999 9999999999853 899
Q ss_pred CCeeeeeceecEEEEeeEEEcCCccEEecCCcEeEEEEeeEEcCCceEEEeecCCCCCcccEEEEEEEeeEEeCCceeEE
Q 043061 215 TDGIHVTGTQNILIKNCVIRTGDDCISIVSGSKNVRATDIICGPGHGISIGSLGAGNSEAFVSNVLVNRARLSGTTNGVR 294 (299)
Q Consensus 215 ~DGi~~~~s~~v~I~n~~i~~gDD~iai~sgs~ni~I~n~~~~~~~Gi~igs~~~~~~~~~v~nv~i~n~~~~~~~~gi~ 294 (299)
+||||+ +|+||+|+||++.++||||+|+++ +||+|+||+|.++|||+|||++. ...|+||+|+||+|.++.+|+|
T Consensus 152 tDGidi-~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghGisIGS~g~---~~~v~nV~v~n~~~~~t~~gir 226 (335)
T 1k5c_A 152 TDGFDV-SANNVTIQNCIVKNQDDCIAINDG-NNIRFENNQCSGGHGISIGSIAT---GKHVSNVVIKGNTVTRSMYGVR 226 (335)
T ss_dssp CCSEEE-ECSSEEEESCEEESSSCSEEEEEE-EEEEEESCEEESSCCEEEEEECT---TCEEEEEEEESCEEEEEEEEEE
T ss_pred CCeEcc-cCCeEEEEeeEEEcCCCEEEeeCC-eeEEEEEEEEECCccCeEeeccC---CCCEEEEEEEeeEEECCCceEE
Confidence 999999 999999999999999999999996 99999999999999999999974 2469999999999999999999
Q ss_pred EEecC
Q 043061 295 IKTWQ 299 (299)
Q Consensus 295 ik~~~ 299 (299)
||+|+
T Consensus 227 IKt~~ 231 (335)
T 1k5c_A 227 IKAQR 231 (335)
T ss_dssp EEEET
T ss_pred EEEeC
Confidence 99996
No 11
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=100.00 E-value=4.9e-43 Score=336.75 Aligned_cols=228 Identities=20% Similarity=0.190 Sum_probs=195.3
Q ss_pred CCeEEEeecCCCCCCCcccHHHHHHHHHHHhhcCCccEEEecCCeeEEe------------eeeeeeCCCccceEEEEee
Q 043061 46 STKIVNVDDFEAKADGTDDSKAFMEAWEEACSSENEAVLVVPNNKIYHL------------KPITFSGPCKSDLTMKIYG 113 (299)
Q Consensus 46 ~~~~~~v~d~Ga~gdg~Ddt~Aiq~Ai~~a~~~~gg~~v~iP~G~~Y~~------------~~l~l~~p~~snvtl~~~g 113 (299)
.+++++|++|||++| ||+|||+||+ +|.+.++++|+||+|++|++ ++|.| +|+++|+++|
T Consensus 48 ~~~~~nV~dfGA~gD---dT~AIqkAId-aCs~~GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~L----kSnVtL~LdG 119 (600)
T 2x6w_A 48 CDPSGNVIQPGPNVD---SRQYLQAAID-YVSSNGGGTITIPAGYTWYLGSYGVGGIAGHSGIIQL----RSNVNLNIEG 119 (600)
T ss_dssp BCTTSCBCCCCTTCC---CHHHHHHHHH-HHHHTTCEEEEECTTCEEEECSCCCGGGGGGTEEEEC----CTTEEEEECS
T ss_pred CCcEEeeecCCCCcc---CHHHHHHHHH-HhhhcCCCEEEECCCCEEEecccccccccccccceEE----cCceEEeeec
Confidence 467899999999999 9999999996 67766778999999988999 89999 8999999999
Q ss_pred EEEEeeccCCCCCC---Cc---eeEEEeeeecEEEEeceEEeCCCcccccccccC-CCceeEEEEccCcEEEEeEEEEcC
Q 043061 114 TIKASVRLSDYSRD---PR---HWLVFENVNNFRVEGGGTIDGNGKVWWRKSCKV-NKSLAVTFYGCKNVRVSSLRFRNS 186 (299)
Q Consensus 114 ~l~~~~~~~~~~~~---~~---~~i~~~~~~ni~I~G~G~idG~g~~~w~~~~~~-~~~~~i~~~~~~nv~I~~v~i~ns 186 (299)
+|+++.++.+|+.. .. .+|.+.+++||+|+|.|+|||+|..||+..... .+|. +.|.+|+ |++++++|+
T Consensus 120 tL~as~d~~~yp~~~~v~~~w~slI~~~~~~NItItG~GtIDGqG~~wW~~~~~~~~RP~-l~f~~c~---I~GITi~NS 195 (600)
T 2x6w_A 120 RIHLSPFFDLKPFQVFVGFDNGDPASSGNLENCHIYGHGVVDFGGYEFGASSQLRNGVAF-GRSYNCS---VTGITFQNG 195 (600)
T ss_dssp EEEECGGGTTSCEEEEECCSSSSGGGCCCEEEEEEESSCEEECTTCCCSSTTCCEEEEEC-CSEEEEE---EESCEEESC
T ss_pred EEEEcCChHHCcccccccccccceEEEecceeEEEecceeeeCCccccccccccCCCCCE-EEEeeeE---EeCeEEECC
Confidence 99999999999541 12 337889999999999999999999999743211 2344 7788888 999999999
Q ss_pred -CCceEEE---eceeeEEEEeEE----EECCCCCCCCCeeeeeceecEEEEeeEEEcCCccEEe-cCCcE-eEEEEeeEE
Q 043061 187 -QKMHLTF---QYCVNVRALNLL----VIAPGNSPNTDGIHVTGTQNILIKNCVIRTGDDCISI-VSGSK-NVRATDIIC 256 (299)
Q Consensus 187 -~~~~i~~---~~s~nv~i~~~~----I~~~~~~~~~DGi~~~~s~~v~I~n~~i~~gDD~iai-~sgs~-ni~I~n~~~ 256 (299)
|.|++++ ..|+||+|+|++ |.+ ++|+||| |+|+||+|.+|||||+| |+++. ++.++ +|
T Consensus 196 DP~w~I~iG~~~~c~NVtI~nvtfi~aI~s---spNTDGI-------V~I~nc~I~tGDDCIAI~KSGs~~ni~~e--~~ 263 (600)
T 2x6w_A 196 DVTWAITLGWNGYGSNCYVRKCRFINLVNS---SVNADHS-------TVYVNCPYSGVESCYFSMSSSFARNIACS--VQ 263 (600)
T ss_dssp CCSCSEEECBTTBEEEEEEESCEEECCCCC---SSCCCEE-------EEEECSSSEEEESCEEECCCTTHHHHEEE--EE
T ss_pred CCccEEEeCCCCCcccEEEeCeEEcceEec---CCCCCEE-------EEEEeeEEecCCcEEEEecCCCcCCeEEE--EE
Confidence 9999999 999999999999 776 7899999 99999999999999999 99974 46777 67
Q ss_pred cCCc-eEEEeecCCC---------------CCcccEEEEEEEeeEEeCCceeEEEEe
Q 043061 257 GPGH-GISIGSLGAG---------------NSEAFVSNVLVNRARLSGTTNGVRIKT 297 (299)
Q Consensus 257 ~~~~-Gi~igs~~~~---------------~~~~~v~nv~i~n~~~~~~~~gi~ik~ 297 (299)
.++| ||+|||++.+ +....|+||+|+|++|.+...++.|..
T Consensus 264 ~~GHgGISIGSe~~ggV~NV~V~NrIKt~~G~GG~V~NItfeNI~m~nV~~~I~i~q 320 (600)
T 2x6w_A 264 LHQHDTFYRGSTVNGYCRGAYVVMHAAEAAGAGSYAYNMQVENNIAVIYGQFVILGS 320 (600)
T ss_dssp ECSSSEEEESCEEEEESEEEEEEECGGGCTTTCSEEEEEEEESCEEEESSEEEEEEE
T ss_pred cCCCCcEEecccccCcEEEEEEEEEEEeecCCCceEEEEEEEEEEEEccceEEEeCC
Confidence 7887 9999996432 123679999999999999888888754
No 12
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=100.00 E-value=6.5e-40 Score=316.50 Aligned_cols=217 Identities=23% Similarity=0.278 Sum_probs=175.6
Q ss_pred CCeEEEeecCCCCCCC-cccHHHHHHHHHHHhhcCCccEEEecCCeeEEe-eeeeeeCCCccceEEEEee----EEEEee
Q 043061 46 STKIVNVDDFEAKADG-TDDSKAFMEAWEEACSSENEAVLVVPNNKIYHL-KPITFSGPCKSDLTMKIYG----TIKASV 119 (299)
Q Consensus 46 ~~~~~~v~d~Ga~gdg-~Ddt~Aiq~Ai~~a~~~~gg~~v~iP~G~~Y~~-~~l~l~~p~~snvtl~~~g----~l~~~~ 119 (299)
+++.++|+||||+||| +|||+|||+||++ + ++|+||+| +|++ ++|.| +++++|.+++ +|+++.
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~~-----G-g~V~iP~G-tYlis~~l~l----~snv~L~g~g~~~t~L~~~~ 87 (609)
T 3gq8_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIES-----G-FPVYVPYG-TFMVSRGIKL----PSNTVLTGAGKRNAVIRFMD 87 (609)
T ss_dssp CSSSEEGGGGTCCCEEEEECHHHHHHHHHT-----S-SCEEECSE-EEEESSCEEE----CSSEEEEESCTTTEEEEECT
T ss_pred CCcEEEeEecccCCCCCchhHHHHHHHHHc-----C-CEEEECCc-cEEEeCceEE----CCCcEEEEeeCCCCEEEeCC
Confidence 4568999999999999 9999999999962 3 69999999 9999 99999 8999999874 677765
Q ss_pred ccCCCCCCCceeEEEeeeecEEEEeceEEeCCCccccccc--ccCCCceeEEEEccCcEEEEeEEEEcCCCceEEEecee
Q 043061 120 RLSDYSRDPRHWLVFENVNNFRVEGGGTIDGNGKVWWRKS--CKVNKSLAVTFYGCKNVRVSSLRFRNSQKMHLTFQYCV 197 (299)
Q Consensus 120 ~~~~~~~~~~~~i~~~~~~ni~I~G~G~idG~g~~~w~~~--~~~~~~~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~s~ 197 (299)
+...|......++.+.+++||+|+| ++|||++..||... ....+|.+|.|.+|+|++|++++++|+|.+++
T Consensus 88 ~~p~~~~li~~lI~a~~~~NItItG-~TIDGNG~~~g~~~~~~g~~RP~lI~f~~c~NV~I~gVti~NSp~~gI------ 160 (609)
T 3gq8_A 88 SVGRGESLMYNENVTTGNENIFLSS-FTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGI------ 160 (609)
T ss_dssp TCCSSCCSEEESCTTTCCEEEEEEE-EEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSE------
T ss_pred CCCCCCceeeeeeeecccccEEEEe-eEEECCccccCcccccCCCCCccEEEEEeeceEEEEeeEEEeCCCCCe------
Confidence 5433321112345678899999999 49999998554321 12346679999999999999999999998544
Q ss_pred eEEEEeEEEECCCCCCCCCeeeeec------eecEEEEeeEE-EcCCccEEecCCcEeEEEEeeEEc-C-----CceEEE
Q 043061 198 NVRALNLLVIAPGNSPNTDGIHVTG------TQNILIKNCVI-RTGDDCISIVSGSKNVRATDIICG-P-----GHGISI 264 (299)
Q Consensus 198 nv~i~~~~I~~~~~~~~~DGi~~~~------s~~v~I~n~~i-~~gDD~iai~sgs~ni~I~n~~~~-~-----~~Gi~i 264 (299)
+|.++.. | ||+++++ |++|+|+||++ .++||||++++ ++||+|+||+|. + +|||+|
T Consensus 161 -------~I~~~~~--N-DGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIks-seNI~I~Nc~~~gp~G~S~~~GIsI 229 (609)
T 3gq8_A 161 -------DITCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDPRLTANCNGFEI 229 (609)
T ss_dssp -------EEECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECCSSCSSCCSEEE
T ss_pred -------EEeCCCC--C-ccccCCCccccccceeEEEEeeEEEecCCCEEEecC-CeeEEEEeEEEECCCCCCCcccEEc
Confidence 4444443 2 6677666 99999999999 56999999977 999999999993 2 479999
Q ss_pred eecCCCCCcccEEEEEEEeeEEeCCceeEEEEecC
Q 043061 265 GSLGAGNSEAFVSNVLVNRARLSGTTNGVRIKTWQ 299 (299)
Q Consensus 265 gs~~~~~~~~~v~nv~i~n~~~~~~~~gi~ik~~~ 299 (299)
|+. .+||+|+||++.++.+|||||++.
T Consensus 230 Gsg--------s~NVtV~Nc~i~nt~~GIrIKt~~ 256 (609)
T 3gq8_A 230 DDG--------SRHVVLSNNRSKGCYGGIEIKAHG 256 (609)
T ss_dssp CTT--------CEEEEEESEEEESSSEEEEEEECT
T ss_pred cCC--------cccEEEEeeEEECCCCEEEEEecC
Confidence 732 499999999999999999999973
No 13
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=100.00 E-value=6.7e-40 Score=320.93 Aligned_cols=217 Identities=23% Similarity=0.278 Sum_probs=176.0
Q ss_pred CCeEEEeecCCCCCCC-cccHHHHHHHHHHHhhcCCccEEEecCCeeEEe-eeeeeeCCCccceEEEEee----EEEEee
Q 043061 46 STKIVNVDDFEAKADG-TDDSKAFMEAWEEACSSENEAVLVVPNNKIYHL-KPITFSGPCKSDLTMKIYG----TIKASV 119 (299)
Q Consensus 46 ~~~~~~v~d~Ga~gdg-~Ddt~Aiq~Ai~~a~~~~gg~~v~iP~G~~Y~~-~~l~l~~p~~snvtl~~~g----~l~~~~ 119 (299)
+++.++|+||||+||| +|||+|||+||++ + ++|+||+| +|++ ++|.| +++++|.+++ +|+++.
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~a-----G-g~V~IPaG-tYlisg~I~L----~snv~L~Geg~~~t~Lk~~~ 87 (772)
T 3gqn_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIES-----G-FPVYVPYG-TFMVSRGIKL----PSNTVLTGAGKRNAVIRFMD 87 (772)
T ss_dssp CSSSEESGGGTCCCEEEEECHHHHHHHHHT-----T-SCEEECSE-EEEESSCEEE----CSSCEEEEEEEEEEEEEECT
T ss_pred CCcEEEeEecccCCCCChhHHHHHHHHHHc-----C-CEEEECCc-cEEEEeEEEE----CCCcEEEEecCCCCEEEeCC
Confidence 4568999999999999 9999999999962 3 69999999 9999 99999 8899999875 567665
Q ss_pred ccCCCCCCCceeEEEeeeecEEEEeceEEeCCCccccccc--ccCCCceeEEEEccCcEEEEeEEEEcCCCceEEEecee
Q 043061 120 RLSDYSRDPRHWLVFENVNNFRVEGGGTIDGNGKVWWRKS--CKVNKSLAVTFYGCKNVRVSSLRFRNSQKMHLTFQYCV 197 (299)
Q Consensus 120 ~~~~~~~~~~~~i~~~~~~ni~I~G~G~idG~g~~~w~~~--~~~~~~~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~s~ 197 (299)
+...|......|+.+.+++||+|+| ++|||++..||... ....++.+|.|.+|+|++|++++++|+|.++
T Consensus 88 d~p~~~~li~~lI~a~gveNItItG-~TIDGNG~~~g~~~~~~g~~RP~lI~f~~ckNV~I~gVti~NSp~~g------- 159 (772)
T 3gqn_A 88 SVGRGESLMYNENVTTGNENIFLSS-FTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHG------- 159 (772)
T ss_dssp TCCSSCCSEEESCTTTCCEEEEEEE-EEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSSCS-------
T ss_pred CCCCCCceeeeeeeccCceeEEEEe-eEEeCCccccCcccccCCCCCccEEEEEeeceEEEEeEEEEeCCCCC-------
Confidence 5433321112345678999999999 59999998544321 1234667999999999999999999999844
Q ss_pred eEEEEeEEEECCCCCCCCCeeeeec------eecEEEEeeEE-EcCCccEEecCCcEeEEEEeeEEc-C-----CceEEE
Q 043061 198 NVRALNLLVIAPGNSPNTDGIHVTG------TQNILIKNCVI-RTGDDCISIVSGSKNVRATDIICG-P-----GHGISI 264 (299)
Q Consensus 198 nv~i~~~~I~~~~~~~~~DGi~~~~------s~~v~I~n~~i-~~gDD~iai~sgs~ni~I~n~~~~-~-----~~Gi~i 264 (299)
++|.++.. | ||+++++ |+||+|+||+| .++||||++++ ++||+|+||+|. + +|||+|
T Consensus 160 ------I~I~np~~--N-DGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIks-SeNI~I~Nc~c~gphG~S~~~GIsI 229 (772)
T 3gqn_A 160 ------IDITCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDPRLTANCNGFEI 229 (772)
T ss_dssp ------EEEECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECCSSSSSCCSEEE
T ss_pred ------EEEeCCCc--C-CcCCCcCcccccccceEEEEeeEEEecCcCeEEecC-CceEEEEeEEEECCCCCCCcccEEe
Confidence 44555543 3 6777776 99999999999 45999999977 999999999993 2 479999
Q ss_pred eecCCCCCcccEEEEEEEeeEEeCCceeEEEEecC
Q 043061 265 GSLGAGNSEAFVSNVLVNRARLSGTTNGVRIKTWQ 299 (299)
Q Consensus 265 gs~~~~~~~~~v~nv~i~n~~~~~~~~gi~ik~~~ 299 (299)
|+. .+||+|+||++.++.+|||||+|.
T Consensus 230 Gsg--------s~NVtV~Nc~~~nT~nGIRIKt~~ 256 (772)
T 3gqn_A 230 DDG--------SRHVVLSNNRSKGCYGGIEIKAHG 256 (772)
T ss_dssp CTT--------CEEEEEEEEEEESSSEEEEECCCT
T ss_pred cCC--------cccEEEEceEEECCCcEEEEEEeC
Confidence 842 499999999999999999999984
No 14
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=100.00 E-value=6.3e-34 Score=270.74 Aligned_cols=229 Identities=22% Similarity=0.299 Sum_probs=156.9
Q ss_pred CCCCCCCeEEE-eecCCCCCCC-cccHHHHHHHHHHHhhcC-CccEEEecCCeeEEeeeeeeeCCCccceEEEEe--eEE
Q 043061 41 SAPASSTKIVN-VDDFEAKADG-TDDSKAFMEAWEEACSSE-NEAVLVVPNNKIYHLKPITFSGPCKSDLTMKIY--GTI 115 (299)
Q Consensus 41 ~~~~~~~~~~~-v~d~Ga~gdg-~Ddt~Aiq~Ai~~a~~~~-gg~~v~iP~G~~Y~~~~l~l~~p~~snvtl~~~--g~l 115 (299)
.+|..+...++ |++|||+||| +|||+|||+||+ +|++. ++++|+||+| +|++++|.| +++++|+++ ++|
T Consensus 13 ~~p~~~~~~~~~V~dfGA~gDG~tDdT~Aiq~Aid-ac~~~~ggg~V~vP~G-tYl~g~I~l----ks~v~L~l~~GatL 86 (464)
T 1h80_A 13 VAPTQQDVNYDLVDDFGANGNDTSDDSNALQRAIN-AISRKPNGGTLLIPNG-TYHFLGIQM----KSNVHIRVESDVII 86 (464)
T ss_dssp CCCSCCSEEEEHHHHHCCCTTSSSBCHHHHHHHHH-HHHTSTTCEEEEECSS-EEEECSEEC----CTTEEEEECTTCEE
T ss_pred cCCCCCcceeeehhccCcCCCCCchhHHHHHHHHH-HHhhccCCcEEEECCC-eEEEeeEec----cCceEEEEcCCcEE
Confidence 35667788999 9999999999 999999999996 56554 5689999999 999999999 899999998 688
Q ss_pred EEeec--cCCCCCCCceeEEE---eeeecEEEEece---EEeCCCcccccccccCCCceeEEEEccCcEEEEeEEEEcCC
Q 043061 116 KASVR--LSDYSRDPRHWLVF---ENVNNFRVEGGG---TIDGNGKVWWRKSCKVNKSLAVTFYGCKNVRVSSLRFRNSQ 187 (299)
Q Consensus 116 ~~~~~--~~~~~~~~~~~i~~---~~~~ni~I~G~G---~idG~g~~~w~~~~~~~~~~~i~~~~~~nv~I~~v~i~ns~ 187 (299)
+++.+ +..| .++.+ .+++||+|+|.| +|||+|.. ..++.+|.|.+|+|++|++++++|+.
T Consensus 87 ~~s~~td~~~y-----~~~~~~~~~~~~nItI~G~Gg~~~iDG~G~~-------~~rp~~i~~~~~~Nv~I~gIti~n~w 154 (464)
T 1h80_A 87 KPTWNGDGKNH-----RLFEVGVNNIVRNFSFQGLGNGFLVDFKDSR-------DKNLAVFKLGDVRNYKISNFTIDDNK 154 (464)
T ss_dssp EECCCTTCSCE-----EEEEESSSSCEEEEEEEECTTCEEEECTTCS-------CCBEEEEEECSEEEEEEEEEEEECCS
T ss_pred EeccCCCcccC-----CceEeecccCccceEEECcCcceEEeCCCCC-------CCCceEEEEEeeccEEEeeeEEeccc
Confidence 88863 4443 23433 789999999998 99998753 22455899999999999999999954
Q ss_pred CceE--E---------EeceeeEEEEeEEEECCCCCCCCCe-eeeeceecEEEEeeEEEcCCccEEecCC----------
Q 043061 188 KMHL--T---------FQYCVNVRALNLLVIAPGNSPNTDG-IHVTGTQNILIKNCVIRTGDDCISIVSG---------- 245 (299)
Q Consensus 188 ~~~i--~---------~~~s~nv~i~~~~I~~~~~~~~~DG-i~~~~s~~v~I~n~~i~~gDD~iai~sg---------- 245 (299)
..+- . ...|+||+|+||+|.++ .+++| ++..+++||+|+||++.. +++|.++++
T Consensus 155 ~ih~s~~V~i~NtDGi~i~s~nV~I~n~~I~~g---ddgiGs~~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~~~g 230 (464)
T 1h80_A 155 TIFASILVDVTERNGRLHWSRNGIIERIKQNNA---LFGYGLIQTYGADNILFRNLHSEG-GIALRMETDNLLMKNYKQG 230 (464)
T ss_dssp CBSCSEEECEEEETTEEEEEEEEEEEEEEEESC---CTTCEEEEESEEEEEEEEEEEEES-SEEEEEECCCHHHHHHTCC
T ss_pred eEeeceeeeeecCCCceeeccCEEEeceEEecC---CCeEEecccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccCCCC
Confidence 3220 0 11455555666655553 23445 444555556666665554 444444443
Q ss_pred -cEeEEEEeeEEcCCc-eEEEeecCCCCCcccEEEEEEEeeEEeCCceeEEEE
Q 043061 246 -SKNVRATDIICGPGH-GISIGSLGAGNSEAFVSNVLVNRARLSGTTNGVRIK 296 (299)
Q Consensus 246 -s~ni~I~n~~~~~~~-Gi~igs~~~~~~~~~v~nv~i~n~~~~~~~~gi~ik 296 (299)
.+||+|+||++.+.+ +|.|++.. ..++||+|+|+++.++.++++|+
T Consensus 231 ~v~NI~~~Ni~~~nv~~~I~I~p~~-----~~isnItfeNI~~t~~~~aI~i~ 278 (464)
T 1h80_A 231 GIRNIFADNIRCSKGLAAVMFGPHF-----MKNGDVQVTNVSSVSCGSAVRSD 278 (464)
T ss_dssp EEEEEEEEEEEEESSSEEEEEECTT-----CBCCCEEEEEEEEESSSCSEEEC
T ss_pred cEEEEEEEeEEEECCceeEEEeCCC-----ceEeEEEEEEEEEEccceeEEEe
Confidence 255555555555442 55555332 12555555555555555555553
No 15
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=100.00 E-value=1.8e-35 Score=287.33 Aligned_cols=216 Identities=14% Similarity=0.233 Sum_probs=177.9
Q ss_pred ecCCCCCCC-cccHHHHHHHHHHHhhc-------------------------CCccEEEecCCeeEEe---eeeeeeCCC
Q 043061 53 DDFEAKADG-TDDSKAFMEAWEEACSS-------------------------ENEAVLVVPNNKIYHL---KPITFSGPC 103 (299)
Q Consensus 53 ~d~Ga~gdg-~Ddt~Aiq~Ai~~a~~~-------------------------~gg~~v~iP~G~~Y~~---~~l~l~~p~ 103 (299)
..|||++|| +|.+.+|. ++.+++.. .++++|+||+| +|++ ++|.|
T Consensus 146 ~~~~~~~dg~~~~~~~l~-ifa~p~~~~~~~P~~~~~~~~~~~~g~~~~~~~~ggg~v~vP~G-~yl~g~~G~i~l---- 219 (549)
T 1x0c_A 146 DLISLAPSGARQPENALL-IFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPG-VYYFTGHDHMVL---- 219 (549)
T ss_dssp GEEEETTTTEEEESEEEE-EEEECCCCTTTSCCTTCSSEECCCSEECCCTTTCCCSEEEECSE-EEECCTTCCEEE----
T ss_pred ccccccccCcCCCcceEE-EEcCChhhccCCCCcCCCCceeeccccccccccCCCCEEEECCe-EEecCCceEEEe----
Confidence 368999999 99999887 44333322 35689999999 9996 58999
Q ss_pred ccceE-EEEe-e-EEEEeeccCCCCCCCceeEEEe-eeecEEEEeceEEeCCCccccccccc------CCCceeEEE---
Q 043061 104 KSDLT-MKIY-G-TIKASVRLSDYSRDPRHWLVFE-NVNNFRVEGGGTIDGNGKVWWRKSCK------VNKSLAVTF--- 170 (299)
Q Consensus 104 ~snvt-l~~~-g-~l~~~~~~~~~~~~~~~~i~~~-~~~ni~I~G~G~idG~g~~~w~~~~~------~~~~~~i~~--- 170 (299)
+++++ |.++ | +|+++ +.+. +++||+|+|.|+|||+|..||..... ..++.+|.|
T Consensus 220 ~s~~~~L~l~~GA~L~gs-------------~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~ 286 (549)
T 1x0c_A 220 SSSVTWVYFAPGAYVKGA-------------VEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRG 286 (549)
T ss_dssp CTTCCEEEECTTEEEESC-------------EEECCCSSEEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEE
T ss_pred cCCCCeEecCCCCEEEEE-------------EEEecCceeEEEEeeEEEECCCceecccCcccccccccCCCceEEEeec
Confidence 89999 9987 3 55543 3344 89999999999999999999853211 113445666
Q ss_pred ---EccCcEEEEeEEEEcCCCceEEEe-ce-ee--EEEEeEEEECCCCCCCCCeeeeeceecEEEEeeEEEcCCccEEec
Q 043061 171 ---YGCKNVRVSSLRFRNSQKMHLTFQ-YC-VN--VRALNLLVIAPGNSPNTDGIHVTGTQNILIKNCVIRTGDDCISIV 243 (299)
Q Consensus 171 ---~~~~nv~I~~v~i~ns~~~~i~~~-~s-~n--v~i~~~~I~~~~~~~~~DGi~~~~s~~v~I~n~~i~~gDD~iai~ 243 (299)
.+|+|++|+|++++|+|+|++++. .| ++ ++|+|+++.++. .+|+||||+. +||+|+||+|.++||||+|+
T Consensus 287 ~~~~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~-~~NTDGidi~--~nV~I~n~~i~~gDDcIaIk 363 (549)
T 1x0c_A 287 TLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAF-YGQTDGLEMY--PGTILQDVFYHTDDDGLKMY 363 (549)
T ss_dssp ECCSSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCC-BTTCCCCBCC--TTCEEEEEEEEESSCCEECC
T ss_pred cccCCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCC-CCCCCccccc--CCEEEEeeEEeCCCCEEEEC
Confidence 999999999999999999999965 56 69 999999998743 4689999999 99999999999999999999
Q ss_pred CCcEeEEEEeeEEcC--Cce-EEEeecCCCCCcccEEEEEEEeeEEeCCce------eEEEEe
Q 043061 244 SGSKNVRATDIICGP--GHG-ISIGSLGAGNSEAFVSNVLVNRARLSGTTN------GVRIKT 297 (299)
Q Consensus 244 sgs~ni~I~n~~~~~--~~G-i~igs~~~~~~~~~v~nv~i~n~~~~~~~~------gi~ik~ 297 (299)
+ +||+|+||+|.. +|| |+|||.. ..|+||+|+||+|.++.+ |.+||+
T Consensus 364 s--~NI~I~n~~~~~~~g~~~IsiGs~~-----~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~ 419 (549)
T 1x0c_A 364 Y--SNVTARNIVMWKESVAPVVEFGWTP-----RNTENVLFDNVDVIHQAYANAGNNPGIFGA 419 (549)
T ss_dssp S--SSEEEEEEEEEECSSSCSEECCBSC-----CCEEEEEEEEEEEEECCCCSGGGCCCSEEE
T ss_pred C--CCEEEEeeEEEcCCCCceEEECCCC-----CcEEEEEEEeeEEECccccccccceEEEec
Confidence 9 999999999964 567 9999952 459999999999999875 666887
No 16
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=100.00 E-value=4.7e-34 Score=277.39 Aligned_cols=185 Identities=16% Similarity=0.220 Sum_probs=155.6
Q ss_pred CccEEEecCCeeEEe-------------eeeeeeCCCccceE-EEEe-e-EEEEeeccCCCCCCCceeEEEeeeecEEEE
Q 043061 80 NEAVLVVPNNKIYHL-------------KPITFSGPCKSDLT-MKIY-G-TIKASVRLSDYSRDPRHWLVFENVNNFRVE 143 (299)
Q Consensus 80 gg~~v~iP~G~~Y~~-------------~~l~l~~p~~snvt-l~~~-g-~l~~~~~~~~~~~~~~~~i~~~~~~ni~I~ 143 (299)
|+++|+||+| +|++ ++|.| +|+++ |.++ | +|++ ++.+.+++||+|+
T Consensus 230 ggg~v~vP~G-~yl~~~~~~~gpc~~g~G~i~l----kSnvt~L~L~~GA~l~g-------------~i~~~~~~nv~It 291 (574)
T 1ogo_X 230 AKSILYFPPG-VYWMNQDQSGNSGKLGSNHIRL----NSNTYWVYLAPGAYVKG-------------AIEYFTKQNFYAT 291 (574)
T ss_dssp SSSEEEECSE-EEEECBCTTCCBSCSSSCCEEC----CTTCCEEEECTTEEEES-------------CEEECCSSCEEEE
T ss_pred CCCEEEECCc-EEEEeccccCCcccccceEEEe----cCCCceEEecCCcEEEc-------------cEEEeCceeEEEE
Confidence 5589999999 9999 45666 67887 7776 3 3432 3788999999999
Q ss_pred eceEEeCCCccccccccc-----CCCceeEEEE------ccCcEEEEeEEEEcCCCceEEEeceeeE--EEEeEEEECCC
Q 043061 144 GGGTIDGNGKVWWRKSCK-----VNKSLAVTFY------GCKNVRVSSLRFRNSQKMHLTFQYCVNV--RALNLLVIAPG 210 (299)
Q Consensus 144 G~G~idG~g~~~w~~~~~-----~~~~~~i~~~------~~~nv~I~~v~i~ns~~~~i~~~~s~nv--~i~~~~I~~~~ 210 (299)
|.|+|||+|..||...+. ..++.++.|. +|+||+|++++++|+|+|++++..|+++ +|+|+++.++.
T Consensus 292 G~GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i~~~~c~nV~~~I~nv~i~~~~ 371 (574)
T 1ogo_X 292 GHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQVGAF 371 (574)
T ss_dssp SSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEESCEEECCSSCSEEECSSSCEEEEEEEEEEECCC
T ss_pred eCEEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEECeEEECCCCcEEeecCCCChhhEEEeeEeeCCC
Confidence 999999999999964322 1234466666 9999999999999999999999999999 99999988642
Q ss_pred CCCCCCeeeeeceecEEEEeeEEEcCCccEEecCCcEeEEEEeeEEcC--Cce-EEEeecCCCCCcccEEEEEEEeeEEe
Q 043061 211 NSPNTDGIHVTGTQNILIKNCVIRTGDDCISIVSGSKNVRATDIICGP--GHG-ISIGSLGAGNSEAFVSNVLVNRARLS 287 (299)
Q Consensus 211 ~~~~~DGi~~~~s~~v~I~n~~i~~gDD~iai~sgs~ni~I~n~~~~~--~~G-i~igs~~~~~~~~~v~nv~i~n~~~~ 287 (299)
..++||||+. +||+|+||+|.++||||+|++ +||+|+||+|.. +|| |+|||.. ..|+||+|+||+|.
T Consensus 372 -~~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks--~NI~I~nc~i~~g~g~g~IsIGS~~-----g~V~NV~v~N~~i~ 441 (574)
T 1ogo_X 372 -FFQTDGPEIY--PNSVVHDVFWHVNDDAIKIYY--SGASVSRATIWKCHNDPIIQMGWTS-----RDISGVTIDTLNVI 441 (574)
T ss_dssp -STTCCCCBCC--TTCEEEEEEEEESSCSEECCS--TTCEEEEEEEEECSSSCSEECCSSC-----CCEEEEEEEEEEEE
T ss_pred -CCCCccCccc--CCEEEEeeEEECCCCEEEECC--ccEEEEeEEEECCCCCceEEEcCCC-----CcEEEEEEEeEEEE
Confidence 2459999999 999999999999999999998 999999999754 567 9999842 45999999999999
Q ss_pred CCcee
Q 043061 288 GTTNG 292 (299)
Q Consensus 288 ~~~~g 292 (299)
++.++
T Consensus 442 ~~~~~ 446 (574)
T 1ogo_X 442 HTRYI 446 (574)
T ss_dssp ECCCS
T ss_pred CCccc
Confidence 87754
No 17
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=100.00 E-value=1.7e-34 Score=265.03 Aligned_cols=211 Identities=18% Similarity=0.176 Sum_probs=162.5
Q ss_pred CeEEEeecCCCCCCC-cccHHHHHHHHHHHhhcCCccEEEecCCe---eEEe-eeeeeeCCCccceEEEEee--EEEEee
Q 043061 47 TKIVNVDDFEAKADG-TDDSKAFMEAWEEACSSENEAVLVVPNNK---IYHL-KPITFSGPCKSDLTMKIYG--TIKASV 119 (299)
Q Consensus 47 ~~~~~v~d~Ga~gdg-~Ddt~Aiq~Ai~~a~~~~gg~~v~iP~G~---~Y~~-~~l~l~~p~~snvtl~~~g--~l~~~~ 119 (299)
+..++|+||||+||| +|||+|||+||++||+..++++|+||+|+ +|++ .+|.| +++++|.+++ ++.+..
T Consensus 49 s~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a~~GGGtVyVPaG~~~~tYlvt~tI~L----kSnV~L~Ge~~AtIl~s~ 124 (514)
T 2vbk_A 49 KEAISILDFGVIDDGVTDNYQAIQNAIDAVASLPSGGELFIPASNQAVGYIVGSTLLI----PGGVNIRGVGKASQLRAK 124 (514)
T ss_dssp TTCCBGGGGCCCCSSSSCCHHHHHHHHHHHHTSTTCEEEECCCCSSTTCEEESSCEEE----CTTEEEECCSTTSEEEEC
T ss_pred CcEEEeeccCcCCCCCcccHHHHHHHHHHHhhcCCCeEEEECCCCcceeEEECCeEEe----cCCeEEEEecCceEeecc
Confidence 468999999999999 99999999999887776566899999995 7987 57888 8999998873 443322
Q ss_pred ccC-C--CCCCCceeEEEeeeecEEEEeceEEeCCCcccccccccCCCceeEEEEccCcEEEEeEEE--EcCCCceEEEe
Q 043061 120 RLS-D--YSRDPRHWLVFENVNNFRVEGGGTIDGNGKVWWRKSCKVNKSLAVTFYGCKNVRVSSLRF--RNSQKMHLTFQ 194 (299)
Q Consensus 120 ~~~-~--~~~~~~~~i~~~~~~ni~I~G~G~idG~g~~~w~~~~~~~~~~~i~~~~~~nv~I~~v~i--~ns~~~~i~~~ 194 (299)
..- . ......+++.+.+++||+|+|.|+|||++..|+......++...+ .+++|.|++++. .+++.|++++.
T Consensus 125 ~~I~GtIia~~y~s~I~~~~VeNIaITG~GTIDG~g~n~t~e~~~~Rq~~~~---~fdnV~Vn~Vt~~v~~Sg~WTIhPi 201 (514)
T 2vbk_A 125 SGLTGSVLRLSYDSDTIGRYLRNIRVTGNNTCNGIDTNITAEDSVIRQVYGW---VFDNVMVNEVETAYLMQGLWHSKFI 201 (514)
T ss_dssp TTCCSEEEEECCCSCCSCEEEESCEEECCSSSEEEEESCCTTCSSCCCEESE---EEESCEEEEEEEEEEEESEEEEEEE
T ss_pred ccccccEEeccCCccccccCceEEEEECCCeEeCCCCCccccceeeeccceE---EeeeEEEEeEEEeEeccCcEEEeEe
Confidence 110 0 000113456788899999999999999876542211112222223 367999999965 47889999999
Q ss_pred ceeeEEEE-eEEEECCCCCCCCCeeeeeceecEEEEeeEEEcCCccEEecCC-----------cEeEEEEeeEEcCCc-e
Q 043061 195 YCVNVRAL-NLLVIAPGNSPNTDGIHVTGTQNILIKNCVIRTGDDCISIVSG-----------SKNVRATDIICGPGH-G 261 (299)
Q Consensus 195 ~s~nv~i~-~~~I~~~~~~~~~DGi~~~~s~~v~I~n~~i~~gDD~iai~sg-----------s~ni~I~n~~~~~~~-G 261 (299)
.|++++++ ++.+. ++|+||+|.+|.|..|||||++++| ++||. | +
T Consensus 202 ~Cqnvt~r~gL~f~-------------eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se~~~---------hga 259 (514)
T 2vbk_A 202 ACQAGTCRVGLHFL-------------GQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSEAVR---------SEA 259 (514)
T ss_dssp SCEEEEEEEEEEEE-------------SCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSSCBC---------CEE
T ss_pred ccCceecccCcccc-------------CCCCeEEEeccEEecCcceeeeecCceecccccCCcchhcc---------ccc
Confidence 99999987 55543 3899999999999999999999997 45555 7 5
Q ss_pred EEEeec-CCCCCcccEEE-EEEEeeEEeCCc
Q 043061 262 ISIGSL-GAGNSEAFVSN-VLVNRARLSGTT 290 (299)
Q Consensus 262 i~igs~-~~~~~~~~v~n-v~i~n~~~~~~~ 290 (299)
|.|||| +++| |.| |+|++|.|.+++
T Consensus 260 v~igSE~m~~G----vk~~v~v~~Clf~~td 286 (514)
T 2vbk_A 260 IILDSETMCIG----FKNAVYVHDCLDLHME 286 (514)
T ss_dssp EEEESSEEEES----CSEEEEESCCEEEEEE
T ss_pred EEECchhhccc----ccccEEEEeeeccCCc
Confidence 999999 7776 999 999999998853
No 18
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.97 E-value=1.5e-30 Score=243.21 Aligned_cols=223 Identities=18% Similarity=0.258 Sum_probs=161.4
Q ss_pred EEEeecCCCCCCC-cccHHHHHHHHHHHhhcCCccEEEecCCeeEEee--------eeeeeCCCccceEEEEee----EE
Q 043061 49 IVNVDDFEAKADG-TDDSKAFMEAWEEACSSENEAVLVVPNNKIYHLK--------PITFSGPCKSDLTMKIYG----TI 115 (299)
Q Consensus 49 ~~~v~d~Ga~gdg-~Ddt~Aiq~Ai~~a~~~~gg~~v~iP~G~~Y~~~--------~l~l~~p~~snvtl~~~g----~l 115 (299)
+++|++|||+||| +|||+|||+||++|+++ ++++|+||+| +|++. +|.+ +++++|+++| +|
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~~~-gg~~v~~p~G-~y~~~~~~~~~~g~l~~----~~~v~l~g~g~~~t~l 75 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAYAA-GGGTVYLPAG-EYRVSAAGEPGDGCLML----KDGVYLAGAGMGETVI 75 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHHHT-TSEEEEECSE-EEEECCCSSGGGCSEEC----CTTEEEEESSBTTEEE
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHHhc-CCCEEEECCe-EEEEcccccCCcccEEe----cCCeEEEEcCCCCcEE
Confidence 6899999999999 99999999999866654 4589999999 99984 7888 8999999985 44
Q ss_pred EEeeccCCCCC------CCceeEEEeeeecEEEEec-----eEEeCCCcccccccccCCCceeEEEEccCcEEEEeEEEE
Q 043061 116 KASVRLSDYSR------DPRHWLVFENVNNFRVEGG-----GTIDGNGKVWWRKSCKVNKSLAVTFYGCKNVRVSSLRFR 184 (299)
Q Consensus 116 ~~~~~~~~~~~------~~~~~i~~~~~~ni~I~G~-----G~idG~g~~~w~~~~~~~~~~~i~~~~~~nv~I~~v~i~ 184 (299)
++......+.. .... ..+.+++|++|+|. |++|| ||...+.. .+..|++++|++++++
T Consensus 76 ~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~I~G~~~~~~G~idG----w~~~~~~~------~~~~~~nv~I~~~~i~ 144 (377)
T 2pyg_A 76 KLIDGSDQKITGMVRSAYGEE-TSNFGMRDLTLDGNRDNTSGKVDG----WFNGYIPG------GDGADRDVTIERVEVR 144 (377)
T ss_dssp EECTTCBSCEEEEEECCTTSC-CEEEEEEEEEEECCGGGCBSCEEE----EEECSCTT------SSCCEEEEEEEEEEEE
T ss_pred EecCCCccCccceEeccCCCc-ceEEEEEEEEEECCCccCCccccc----eecccCcc------ccccccceEEEeEEEE
Confidence 55543322210 0011 13457899999997 78887 88654321 2247999999999999
Q ss_pred cCCCceEEEecee-eEEEEeEEEECCC-------------------CCCCCCeeeeec-eecEEEEeeEEEcCCccEEec
Q 043061 185 NSQKMHLTFQYCV-NVRALNLLVIAPG-------------------NSPNTDGIHVTG-TQNILIKNCVIRTGDDCISIV 243 (299)
Q Consensus 185 ns~~~~i~~~~s~-nv~i~~~~I~~~~-------------------~~~~~DGi~~~~-s~~v~I~n~~i~~gDD~iai~ 243 (299)
+++.+++++..|. +++++|+.+.... ..++.|||++.. +++++|++|++...++|+++.
T Consensus 145 n~~~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~ 224 (377)
T 2pyg_A 145 EMSGYGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYGNGSSGLVV 224 (377)
T ss_dssp CCSSCSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSSCSEEE
T ss_pred ecccceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEECccCceEEE
Confidence 9999999998765 6777777774311 123466666554 666666666666666666652
Q ss_pred -------CCcEeEEEEeeEEcC--CceEEEeecCCCCCcccEEEEEEEeeEEeCC-ceeEEEEe
Q 043061 244 -------SGSKNVRATDIICGP--GHGISIGSLGAGNSEAFVSNVLVNRARLSGT-TNGVRIKT 297 (299)
Q Consensus 244 -------sgs~ni~I~n~~~~~--~~Gi~igs~~~~~~~~~v~nv~i~n~~~~~~-~~gi~ik~ 297 (299)
..+++++|++|++.+ .+||.+ ..+++++|++|++.++ ..||+||.
T Consensus 225 ~~g~~~~~~s~nv~i~~N~~~~n~~~Gi~~---------~~~~~v~i~~N~i~~~~~~GI~i~g 279 (377)
T 2pyg_A 225 QRGLEDLALPSNILIDGGAYYDNAREGVLL---------KMTSDITLQNADIHGNGSSGVRVYG 279 (377)
T ss_dssp ECCSSCCCCCEEEEEESCEEESCSSCSEEE---------EEEEEEEEESCEEESCSSCSEEEEE
T ss_pred eccccCCCCCccEEEECCEEEcCccCceEe---------ccccCeEEECCEEECCCCceEEEec
Confidence 345666666666654 346555 2488999999999998 89999984
No 19
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.88 E-value=2.3e-22 Score=197.39 Aligned_cols=221 Identities=17% Similarity=0.222 Sum_probs=157.6
Q ss_pred CCCeEEEeecCCCCCCC-cccHHHHHHHHHHHhhcCCc---------cEEEecCCeeEEe-eeeeeeCCCccceEEEEee
Q 043061 45 SSTKIVNVDDFEAKADG-TDDSKAFMEAWEEACSSENE---------AVLVVPNNKIYHL-KPITFSGPCKSDLTMKIYG 113 (299)
Q Consensus 45 ~~~~~~~v~d~Ga~gdg-~Ddt~Aiq~Ai~~a~~~~gg---------~~v~iP~G~~Y~~-~~l~l~~p~~snvtl~~~g 113 (299)
.-+..+||+||||+||| +|||+|||+||++ +++.|+ ++|+||+| +|++ ++|.+ ++++.|.+++
T Consensus 45 ~y~v~~nV~dfGA~GDG~tDDT~Aiq~Ai~~-a~~~Gggc~~st~~~~~V~~P~G-tYlvs~tI~l----~~~t~L~G~~ 118 (758)
T 3eqn_A 45 GYPVFRNVKNYGAKGDGNTDDTAAIQAAINA-GGRCGQGCDSTTTQPALVYFPPG-TYKVSSPLVV----LYQTQLIGDA 118 (758)
T ss_dssp TCCSEEEGGGGTCCCEEEEECHHHHHHHHHT-TSCSCTTCCCCSSSCEEEEECSS-EEEESSCEEC----CTTEEEEECS
T ss_pred CCeEEEEHHHcCcCCCCCchhHHHHHHHHHH-hhhcccccccccccceEEEECCc-eEEEcccEEc----cCCeEEEecC
Confidence 34558899999999999 9999999999974 433332 59999999 9987 58999 8999999884
Q ss_pred ----EEEEeeccCCCCCCCceeEEEeeeecEEEEeceEEeCCCcccccccccCCCceeEEEEccCcEEEEeEEEEcCCCc
Q 043061 114 ----TIKASVRLSDYSRDPRHWLVFENVNNFRVEGGGTIDGNGKVWWRKSCKVNKSLAVTFYGCKNVRVSSLRFRNSQKM 189 (299)
Q Consensus 114 ----~l~~~~~~~~~~~~~~~~i~~~~~~ni~I~G~G~idG~g~~~w~~~~~~~~~~~i~~~~~~nv~I~~v~i~ns~~~ 189 (299)
+|++... |.. .. .|.+ ...+++|..||.+. ...+..++|+.|+ ++-.++...
T Consensus 119 ~~~pvIka~~~---F~G--~~----------li~~-d~y~~~G~~w~~~~-------~~F~r~irNlviD-~t~~~~~~~ 174 (758)
T 3eqn_A 119 KNLPTLLAAPN---FSG--IA----------LIDA-DPYLAGGAQYYVNQ-------NNFFRSVRNFVID-LRQVSGSAT 174 (758)
T ss_dssp SSCCEEEECTT---CCS--SC----------SEES-SCBCGGGCBSSCGG-------GCCCEEEEEEEEE-CTTCSSCEE
T ss_pred CCCCeEecCCC---CCC--cc----------eeec-cccCCCCccccccc-------cceeeeecceEEe-ccccCCCce
Confidence 5665432 210 11 1333 34556777888654 2455667777777 555566677
Q ss_pred eEEEeceeeEEEEeEEEECCCCCC-CCCeeeeeceecEEEEeeEEEcCCccEEecCC---cEeEEEEeeEE---------
Q 043061 190 HLTFQYCVNVRALNLLVIAPGNSP-NTDGIHVTGTQNILIKNCVIRTGDDCISIVSG---SKNVRATDIIC--------- 256 (299)
Q Consensus 190 ~i~~~~s~nv~i~~~~I~~~~~~~-~~DGi~~~~s~~v~I~n~~i~~gDD~iai~sg---s~ni~I~n~~~--------- 256 (299)
+|++..|.+..|+||.|..+..+. ..+||+++.+....|+|++|..|+-++.+... .+|++|+||..
T Consensus 175 gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f~GG~~G~~~gnQQfT~rnltF~~~~taI~~~w~wg 254 (758)
T 3eqn_A 175 GIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGNIGATFGNQQFTVRNLTFNNANTAINAIWNWG 254 (758)
T ss_dssp EEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEEESCSEEEEEECSCCEEEEEEEESCSEEEEEEEBSC
T ss_pred EEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEEeCCceEEEcCCcceEEeccEEeChHHHHhhhcCce
Confidence 899999999999999999976653 48999999888999999999999999888663 35555555532
Q ss_pred --------cCCc-eEEEeecCCC-CCcccEEEEEEEeeEEeCCceeEEE
Q 043061 257 --------GPGH-GISIGSLGAG-NSEAFVSNVLVNRARLSGTTNGVRI 295 (299)
Q Consensus 257 --------~~~~-Gi~igs~~~~-~~~~~v~nv~i~n~~~~~~~~gi~i 295 (299)
.++. ||.+-+-+.. .....+-.|++.|.++.++..+|..
T Consensus 255 wt~~~~~i~nc~vGi~~~~g~~~~~~~q~vGsv~l~Ds~~~n~~~~i~t 303 (758)
T 3eqn_A 255 WTFQRITINNCQVGFDLTQGGTSNTGAQGVGAEAIIDAVVTNTQTFVRW 303 (758)
T ss_dssp EEEEEEEEESCSEEEEECCCCSSTTSCCCBCEEEEEEEEEESCSEEEEE
T ss_pred EEEEEeEEECCCccEEEcCCCCCcccCcceeeEEEEEeeEEcccceEEe
Confidence 1222 4544221110 0123467888899999888877653
No 20
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.75 E-value=3.8e-17 Score=155.30 Aligned_cols=150 Identities=15% Similarity=0.232 Sum_probs=123.3
Q ss_pred ceeEEEeeeecEEEEeceEEeCCCcccccccccCCCceeEEEEccCcEEEEeEEEEcCC--CceEEEeceeeEEEEeEEE
Q 043061 129 RHWLVFENVNNFRVEGGGTIDGNGKVWWRKSCKVNKSLAVTFYGCKNVRVSSLRFRNSQ--KMHLTFQYCVNVRALNLLV 206 (299)
Q Consensus 129 ~~~i~~~~~~ni~I~G~G~idG~g~~~w~~~~~~~~~~~i~~~~~~nv~I~~v~i~ns~--~~~i~~~~s~nv~i~~~~I 206 (299)
+.++.|.+++|++|+|--..+. .. | .+++.+|+|++|+++++.++. ..+|++..|+||+|+||.|
T Consensus 190 P~~i~~~~~~nv~i~giti~ns--p~-~----------~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n~~i 256 (448)
T 3jur_A 190 PSFVQFYRCRNVLVEGVKIINS--PM-W----------CIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKCRF 256 (448)
T ss_dssp CCSEEEESCEEEEEESCEEESC--SS-C----------SEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEESCEE
T ss_pred ceEEEEEcccceEEEeeEEEeC--CC-c----------eEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEEEeeEE
Confidence 4579999999999999433332 22 3 599999999999999999852 3469999999999999999
Q ss_pred ECCCCCCCCCeeeee------------ceecEEEEeeEE--EcCCccEEecCC----cEeEEEEeeEEcCC-ceEEEeec
Q 043061 207 IAPGNSPNTDGIHVT------------GTQNILIKNCVI--RTGDDCISIVSG----SKNVRATDIICGPG-HGISIGSL 267 (299)
Q Consensus 207 ~~~~~~~~~DGi~~~------------~s~~v~I~n~~i--~~gDD~iai~sg----s~ni~I~n~~~~~~-~Gi~igs~ 267 (299)
.+ ..|+|.+. +|+||+|+||++ ..+++||+|++. .+||+|+||+|.++ +|+.|++.
T Consensus 257 ~~-----gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t~~GirIKt~ 331 (448)
T 3jur_A 257 DT-----GDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKTN 331 (448)
T ss_dssp EE-----SSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEESCSEEEEEECC
T ss_pred Ee-----CCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEecccceEEEEEE
Confidence 97 45666664 289999999999 556779999885 49999999999876 79999986
Q ss_pred CCCCCcccEEEEEEEeeEEeCCceeE-EEEec
Q 043061 268 GAGNSEAFVSNVLVNRARLSGTTNGV-RIKTW 298 (299)
Q Consensus 268 ~~~~~~~~v~nv~i~n~~~~~~~~gi-~ik~~ 298 (299)
...+ ..|+||+|+|++|.+..+++ +|+.+
T Consensus 332 ~g~g--G~v~nI~f~ni~m~~v~~~~i~I~~~ 361 (448)
T 3jur_A 332 SRRG--GYMENIFFIDNVAVNVSEEVIRINLR 361 (448)
T ss_dssp TTTC--SEEEEEEEESCEEEEESSEEEEEESC
T ss_pred cCCC--ceEeeEEEEEEEEECCccccEEEEee
Confidence 4322 57999999999999999988 88753
No 21
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.71 E-value=2e-16 Score=145.81 Aligned_cols=231 Identities=15% Similarity=0.191 Sum_probs=150.2
Q ss_pred CCCCCeEEEeecC----CCCCCC-cccHHHHHHHHHHHhh------cCCccEEEecCCeeEEe-eeeeeeCCCccceEEE
Q 043061 43 PASSTKIVNVDDF----EAKADG-TDDSKAFMEAWEEACS------SENEAVLVVPNNKIYHL-KPITFSGPCKSDLTMK 110 (299)
Q Consensus 43 ~~~~~~~~~v~d~----Ga~gdg-~Ddt~Aiq~Ai~~a~~------~~gg~~v~iP~G~~Y~~-~~l~l~~p~~snvtl~ 110 (299)
+-.....|+|++| +|+||+ +|++++|+++|++..+ +..|.+|++|+| +|.+ +++.+. ++.++|+
T Consensus 8 ~~~~~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~pGdvI~L~~G-~Y~l~g~ivId---kp~LtL~ 83 (410)
T 2inu_A 8 PLNSPNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARPGAAIIIPPG-DYDLHTQVVVD---VSYLTIA 83 (410)
T ss_dssp ----CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCCCEEEECCSE-EEEECSCEEEC---CTTEEEE
T ss_pred ccccCceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCCCCEEEECCC-eeccCCcEEEe---cCcEEEE
Confidence 3456789999999 899999 9999999999976553 233489999999 9985 888883 4448988
Q ss_pred Eee--E----EEEeeccCCC----CCC----------CceeEEEee-----eecEEEEeceEEeCCCcccccccccCCCc
Q 043061 111 IYG--T----IKASVRLSDY----SRD----------PRHWLVFEN-----VNNFRVEGGGTIDGNGKVWWRKSCKVNKS 165 (299)
Q Consensus 111 ~~g--~----l~~~~~~~~~----~~~----------~~~~i~~~~-----~~ni~I~G~G~idG~g~~~w~~~~~~~~~ 165 (299)
+.+ . |.+......| +.+ ....|..+. +++|+|+| -+|+|-.-.-|... ..+..
T Consensus 84 G~~~g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~-v~I~G~~~~~~G~s-~~~~d 161 (410)
T 2inu_A 84 GFGHGFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRD-FCLDGVGFTPGKNS-YHNGK 161 (410)
T ss_dssp CSCCCCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSCEECCEEES-CEEECCCCSSSTTS-CCCSC
T ss_pred ecCCCcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcccCCcEECC-EEEECCEeecCCCC-cccCc
Confidence 754 2 2211111232 111 112233322 25666666 45555411111111 11234
Q ss_pred eeEEEEc-cCcEEEEeEEEEcCCCceEEEeceeeEEEEeEEEECCCCCCCCCeeeeec-eecEEEEeeEEEcCCcc--EE
Q 043061 166 LAVTFYG-CKNVRVSSLRFRNSQKMHLTFQYCVNVRALNLLVIAPGNSPNTDGIHVTG-TQNILIKNCVIRTGDDC--IS 241 (299)
Q Consensus 166 ~~i~~~~-~~nv~I~~v~i~ns~~~~i~~~~s~nv~i~~~~I~~~~~~~~~DGi~~~~-s~~v~I~n~~i~~gDD~--ia 241 (299)
.+|++.. +++++|+++.|.+.. ++|.+..+++++|+++.|.. ...||++++ ++...|+++.+..++|| |.
T Consensus 162 AGI~v~~~~d~~~I~nn~i~~~~-fGI~l~~a~~~~I~~N~I~e-----~GNgI~L~G~~~~~~I~~N~i~~~~dG~gIy 235 (410)
T 2inu_A 162 TGIEVASDNDSFHITGMGFVYLE-HALIVRGADALRVNDNMIAE-----CGNCVELTGAGQATIVSGNHMGAGPDGVTLL 235 (410)
T ss_dssp EEEEECSCEESCEEESCEEESCS-EEEEETTEESCEEESCEEES-----SSEEEEECSCEESCEEESCEEECCTTSEEEE
T ss_pred eeEEEeccCCeEEEECCEEeccc-EEEEEccCCCcEEECCEEEe-----cCCceeeccccccceEecceeeecCCCCEEE
Confidence 4788876 889999999999875 89999999999999999994 567788877 77788888888888777 55
Q ss_pred ecCCcEeEEEEeeEEc-CCc-eEEEeecCCCCCcccEEEEEEEeeEEeCCceeEEE
Q 043061 242 IVSGSKNVRATDIICG-PGH-GISIGSLGAGNSEAFVSNVLVNRARLSGTTNGVRI 295 (299)
Q Consensus 242 i~sgs~ni~I~n~~~~-~~~-Gi~igs~~~~~~~~~v~nv~i~n~~~~~~~~gi~i 295 (299)
++. +.+.+|+++.+. .+. ||.+-. ..+..|+++.|.+..+|+.+
T Consensus 236 l~n-s~~~~I~~N~i~~~~R~gIh~m~---------s~~~~i~~N~f~~~~~Gi~~ 281 (410)
T 2inu_A 236 AEN-HEGLLVTGNNLFPRGRSLIEFTG---------CNRCSVTSNRLQGFYPGMLR 281 (410)
T ss_dssp EES-EESCEEESCEECSCSSEEEEEES---------CBSCEEESCEEEESSSCSEE
T ss_pred EEe-CCCCEEECCCcccCcceEEEEEc---------cCCCEEECCEEecceeEEEE
Confidence 554 566677777553 343 666511 23345666666665555544
No 22
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.71 E-value=1e-15 Score=140.78 Aligned_cols=172 Identities=15% Similarity=0.158 Sum_probs=137.7
Q ss_pred ccceEEEEe--eEEEEeeccCCCC-------CCCceeEEEeeeecEEEEeceEEeCCCcccccccccCCCceeEEEEccC
Q 043061 104 KSDLTMKIY--GTIKASVRLSDYS-------RDPRHWLVFENVNNFRVEGGGTIDGNGKVWWRKSCKVNKSLAVTFYGCK 174 (299)
Q Consensus 104 ~snvtl~~~--g~l~~~~~~~~~~-------~~~~~~i~~~~~~ni~I~G~G~idG~g~~~w~~~~~~~~~~~i~~~~~~ 174 (299)
.++++|.+. |+|.+.... -|. ...+.++.+.+++|++|+|- ++..... | .+++.+|+
T Consensus 67 ~~nv~I~G~~gG~IdG~G~~-~w~~~~~~~~~~rp~~i~~~~~~nv~i~gi-ti~nsp~--~----------~i~i~~~~ 132 (339)
T 2iq7_A 67 GTNININGASGHSIDCQGSR-WWDSKGSNGGKTKPKFFYAHSLKSSNIKGL-NVLNTPV--Q----------AFSINSAT 132 (339)
T ss_dssp EESCEEEECTTCEEECCGGG-TCCSCGGGSSSCCCCCEEEEEEEEEEEECC-EEECCSS--C----------CEEEESCE
T ss_pred cccEEEEcCCCCEEECCccc-ccccccccCCCCCCeEEEEeeeCcEEEEEE-EEEeCCc--c----------eEEEeccC
Confidence 378888886 687766432 232 12345789999999999994 4433221 2 59999999
Q ss_pred cEEEEeEEEEcCC--------CceEEEeceeeEEEEeEEEECCCCCCCCCeeeeeceecEEEEeeEEEcCCccEEecC--
Q 043061 175 NVRVSSLRFRNSQ--------KMHLTFQYCVNVRALNLLVIAPGNSPNTDGIHVTGTQNILIKNCVIRTGDDCISIVS-- 244 (299)
Q Consensus 175 nv~I~~v~i~ns~--------~~~i~~~~s~nv~i~~~~I~~~~~~~~~DGi~~~~s~~v~I~n~~i~~gDD~iai~s-- 244 (299)
|++|++++|.+++ ..++++..|+||+|+||.|.. ..|+|.+.+++||+|+||++..++ +|+|++
T Consensus 133 nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~-----gDDciaiksg~nI~i~n~~~~~gh-GisiGSlg 206 (339)
T 2iq7_A 133 TLGVYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKN-----QDDCLAINSGTNITFTGGTCSGGH-GLSIGSVG 206 (339)
T ss_dssp EEEEESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEEC-----SSCSEEESSEEEEEEESCEEESSC-CEEEEEES
T ss_pred CEEEEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEec-----CCCEEEEcCCccEEEEeEEEECCc-eEEECcCC
Confidence 9999999999753 236999999999999999986 679999999999999999999986 699977
Q ss_pred -----CcEeEEEEeeEEcCC-ceEEEeecCCCCCcccEEEEEEEeeEEeCCce-eEEEEe
Q 043061 245 -----GSKNVRATDIICGPG-HGISIGSLGAGNSEAFVSNVLVNRARLSGTTN-GVRIKT 297 (299)
Q Consensus 245 -----gs~ni~I~n~~~~~~-~Gi~igs~~~~~~~~~v~nv~i~n~~~~~~~~-gi~ik~ 297 (299)
+.+||+|+||++.++ +|+.|.+.... ...|+||+|+|++|.+..+ +|.|..
T Consensus 207 ~~~~~~v~nV~v~n~~~~~~~~girIkt~~g~--~G~v~nI~~~ni~~~~v~~~~i~i~~ 264 (339)
T 2iq7_A 207 GRSDNTVKTVTISNSKIVNSDNGVRIKTVSGA--TGSVSGVTYSGITLSNIAKYGIVIEQ 264 (339)
T ss_dssp SSSCCEEEEEEEEEEEEESCSEEEEEEEETTC--CCEEEEEEEEEEEEEEESSEEEEEEE
T ss_pred cccCCCEEEEEEEeeEEECCCcEEEEEEeCCC--CeEEEEEEEEeEEccCcccccEEEEe
Confidence 259999999999875 59999886432 3579999999999999775 998864
No 23
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.70 E-value=4.1e-15 Score=138.74 Aligned_cols=172 Identities=17% Similarity=0.180 Sum_probs=137.9
Q ss_pred ccceEEEEeeEEEEeecc-------CCCC-----------CCCceeEEEeeeecEEEEeceEEeCCCcccccccccCCCc
Q 043061 104 KSDLTMKIYGTIKASVRL-------SDYS-----------RDPRHWLVFENVNNFRVEGGGTIDGNGKVWWRKSCKVNKS 165 (299)
Q Consensus 104 ~snvtl~~~g~l~~~~~~-------~~~~-----------~~~~~~i~~~~~~ni~I~G~G~idG~g~~~w~~~~~~~~~ 165 (299)
..|++|.+.|+|.+.... .-|. ...+.++.+.+++|++|+| -++.... . |
T Consensus 108 ~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~-iti~nsp-~-~--------- 175 (376)
T 1bhe_A 108 TTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYN-VSLINSP-N-F--------- 175 (376)
T ss_dssp CBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCEEEEEEE-EEEECCS-S-C---------
T ss_pred CEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEcceEEEEEe-EEEECCC-c-E---------
Confidence 578888888888776531 1231 1245679999999999999 4444322 2 2
Q ss_pred eeEEEEccCcEEEEeEEEEcCC----CceEEEeceeeEEEEeEEEECCCCCCCCCeeeee------ceecEEEEeeEEEc
Q 043061 166 LAVTFYGCKNVRVSSLRFRNSQ----KMHLTFQYCVNVRALNLLVIAPGNSPNTDGIHVT------GTQNILIKNCVIRT 235 (299)
Q Consensus 166 ~~i~~~~~~nv~I~~v~i~ns~----~~~i~~~~s~nv~i~~~~I~~~~~~~~~DGi~~~------~s~~v~I~n~~i~~ 235 (299)
.+++..|+|++|++++|.++. .-+|++..|+||+|+||.|.. ..|+|.+. +|+||+|+||++..
T Consensus 176 -~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~-----gDDcIaiks~~~~~~s~nI~I~n~~~~~ 249 (376)
T 1bhe_A 176 -HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIAT-----GDDNVAIKAYKGRAETRNISILHNDFGT 249 (376)
T ss_dssp -SEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEEC-----SSCSEEEEECTTSCCEEEEEEEEEEECS
T ss_pred -EEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEec-----CCCeEEEcccCCCCCceEEEEEeeEEEc
Confidence 589999999999999999853 336999999999999999997 57999997 69999999999987
Q ss_pred CCccEEecC---CcEeEEEEeeEEcCC-ceEEEeecCCCCCcccEEEEEEEeeEEeCCceeEEEE
Q 043061 236 GDDCISIVS---GSKNVRATDIICGPG-HGISIGSLGAGNSEAFVSNVLVNRARLSGTTNGVRIK 296 (299)
Q Consensus 236 gDD~iai~s---gs~ni~I~n~~~~~~-~Gi~igs~~~~~~~~~v~nv~i~n~~~~~~~~gi~ik 296 (299)
+ .+++|++ +.+||+|+||++.++ .|+.|.+.-. ....|+||+|+|++|.+..++|.|.
T Consensus 250 g-hGisiGSe~~~v~nV~v~n~~~~~t~~GirIKt~~g--~~G~v~ni~f~ni~~~~v~~~i~i~ 311 (376)
T 1bhe_A 250 G-HGMSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDKS--AAGVVNGVRYSNVVMKNVAKPIVID 311 (376)
T ss_dssp S-SCEEEEEEESSEEEEEEEEEEEESCSEEEEEECCTT--TCCEEEEEEEEEEEEESCSEEEEEE
T ss_pred c-ccEEeccCCccEeeEEEEeeEEeCCCcEEEEEEecC--CCceEeeEEEEeEEEeCCCceEEEE
Confidence 6 4699976 579999999999876 4999987522 2257999999999999999999885
No 24
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.70 E-value=5.1e-16 Score=153.04 Aligned_cols=156 Identities=13% Similarity=0.102 Sum_probs=126.2
Q ss_pred CceeEEEeeeecEEEEeceEEeCCCcccccccccCCCceeEEEEccCcEEEEeEEEEc--CC-CceEEEeceeeEEEEeE
Q 043061 128 PRHWLVFENVNNFRVEGGGTIDGNGKVWWRKSCKVNKSLAVTFYGCKNVRVSSLRFRN--SQ-KMHLTFQYCVNVRALNL 204 (299)
Q Consensus 128 ~~~~i~~~~~~ni~I~G~G~idG~g~~~w~~~~~~~~~~~i~~~~~~nv~I~~v~i~n--s~-~~~i~~~~s~nv~i~~~ 204 (299)
++.++.+.+|+|++|+|- +|.... .| .+++.+|+|++|+++++.. ++ ..+|++..|+||+|+||
T Consensus 330 rP~~i~~~~~~nv~I~gi-ti~ns~--~~----------~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I~n~ 396 (608)
T 2uvf_A 330 RSSLMTLRGVENVYLAGF-TVRNPA--FH----------GIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMVFNN 396 (608)
T ss_dssp SCCSEEEESEEEEEEESC-EEECCS--SC----------SEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEEEEESC
T ss_pred CCeEEEEEeeeeEEEeCc-EEecCC--CC----------EEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceEEEEee
Confidence 346799999999999994 443321 23 5999999999999999875 23 34799999999999999
Q ss_pred EEECCCC------CCCCCeeeeeceecEEEEeeEEEcCCccEEecCC----cEeEEEEeeEEcCC-ceEEEeecCCCCCc
Q 043061 205 LVIAPGN------SPNTDGIHVTGTQNILIKNCVIRTGDDCISIVSG----SKNVRATDIICGPG-HGISIGSLGAGNSE 273 (299)
Q Consensus 205 ~I~~~~~------~~~~DGi~~~~s~~v~I~n~~i~~gDD~iai~sg----s~ni~I~n~~~~~~-~Gi~igs~~~~~~~ 273 (299)
.|...++ +.+.||++..+|+||+|+||++.+++++++|++. .+||+|+||+|.++ +||+|++....+
T Consensus 397 ~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~~~~v~nI~v~n~~~~~t~~GirIKt~~g~g-- 474 (608)
T 2uvf_A 397 FFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIEDILAENNVMYLTDIGLRAKSTSTIG-- 474 (608)
T ss_dssp EEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCCTTCEEEEEEESCEEESCSEEEEEEEETTTC--
T ss_pred EEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccCCCCEEEEEEEeEEEECCCceEEEeeecCCC--
Confidence 9997433 2345555555689999999999999999989884 49999999999886 699999864322
Q ss_pred ccEEEEEEEeeEEeCC-ceeEEEEec
Q 043061 274 AFVSNVLVNRARLSGT-TNGVRIKTW 298 (299)
Q Consensus 274 ~~v~nv~i~n~~~~~~-~~gi~ik~~ 298 (299)
..|+||+|+|++|.+. .++|.|+.+
T Consensus 475 G~v~nI~~~ni~m~~v~~~~i~I~~~ 500 (608)
T 2uvf_A 475 GGARNVTFRNNAMRDLAKQVMVMTLD 500 (608)
T ss_dssp CEEEEEEEEEEEEEEESSEEEEEEEE
T ss_pred ceEECcEEEeeEEEccccccEEEEec
Confidence 5799999999999998 599999864
No 25
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.69 E-value=2.9e-15 Score=138.30 Aligned_cols=172 Identities=18% Similarity=0.182 Sum_probs=136.0
Q ss_pred ccceEEEE--eeEEEEeeccCCCCC--------CCceeEEE-e-eeecEEEEeceEEeCCCcccccccccCCCceeEEEE
Q 043061 104 KSDLTMKI--YGTIKASVRLSDYSR--------DPRHWLVF-E-NVNNFRVEGGGTIDGNGKVWWRKSCKVNKSLAVTFY 171 (299)
Q Consensus 104 ~snvtl~~--~g~l~~~~~~~~~~~--------~~~~~i~~-~-~~~ni~I~G~G~idG~g~~~w~~~~~~~~~~~i~~~ 171 (299)
.++++|.+ .|+|.+... .-|.. ..+.++.+ . .++|++|+|- ++.... .| .+++.
T Consensus 68 ~~ni~I~G~~~G~IdG~G~-~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~gi-ti~nsp--~~----------~i~i~ 133 (349)
T 1hg8_A 68 GSNITITGASGHVIDGNGQ-AYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNL-NIQNWP--VH----------CFDIT 133 (349)
T ss_dssp EESCEEEECTTCEEECCGG-GTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESC-EEECCS--SE----------EEEEE
T ss_pred CccEEEEecCCCEEcCCcc-hhhhcccccCCCCCCCeEEEEeecCcCcEEEEEE-EEEcCC--Cc----------eEEEe
Confidence 37888888 478776643 12321 23447888 7 7789999994 443322 12 69999
Q ss_pred ccCcEEEEeEEEEcCC----------------CceEEEeceeeEEEEeEEEECCCCCCCCCeeeeeceecEEEEeeEEEc
Q 043061 172 GCKNVRVSSLRFRNSQ----------------KMHLTFQYCVNVRALNLLVIAPGNSPNTDGIHVTGTQNILIKNCVIRT 235 (299)
Q Consensus 172 ~~~nv~I~~v~i~ns~----------------~~~i~~~~s~nv~i~~~~I~~~~~~~~~DGi~~~~s~~v~I~n~~i~~ 235 (299)
+|+|++|++++|.+++ ..+|++..|+||+|+||.|.. ..|+|.+.+++||+|+||++..
T Consensus 134 ~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~n~~~~~ 208 (349)
T 1hg8_A 134 GSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYN-----QDDCVAVTSGTNIVVSNMYCSG 208 (349)
T ss_dssp SCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEEC-----SSCSEEESSEEEEEEEEEEEES
T ss_pred ccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEec-----CCCeEEeeCCeEEEEEeEEEeC
Confidence 9999999999999753 235999999999999999997 6799999999999999999998
Q ss_pred CCccEEecCC-------cEeEEEEeeEEcCC-ceEEEeecCCCCCcccEEEEEEEeeEEeCCc-eeEEEEe
Q 043061 236 GDDCISIVSG-------SKNVRATDIICGPG-HGISIGSLGAGNSEAFVSNVLVNRARLSGTT-NGVRIKT 297 (299)
Q Consensus 236 gDD~iai~sg-------s~ni~I~n~~~~~~-~Gi~igs~~~~~~~~~v~nv~i~n~~~~~~~-~gi~ik~ 297 (299)
++ +|+|++- .+||+|+||++.++ +||.|.+.... ...|+||+|+|++|.+.. ++|.|..
T Consensus 209 gh-GisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g~--~G~v~nI~~~ni~~~~v~~~~i~i~~ 276 (349)
T 1hg8_A 209 GH-GLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSGA--TGTINNVTYQNIALTNISTYGVDVQQ 276 (349)
T ss_dssp SC-CEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETTC--CEEEEEEEEEEEEEEEEEEEEEEEEE
T ss_pred Cc-ceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecCCC--CccccceEEEEEEEEccccccEEEEe
Confidence 76 6999762 69999999999875 59999886432 357999999999999986 7998864
No 26
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.68 E-value=3.2e-15 Score=137.48 Aligned_cols=172 Identities=19% Similarity=0.188 Sum_probs=137.2
Q ss_pred ccceEEEEe--eEEEEeeccCCCC-------CCCceeEEEeeeecEEEEeceEEeCCCcccccccccCCCceeEEEEccC
Q 043061 104 KSDLTMKIY--GTIKASVRLSDYS-------RDPRHWLVFENVNNFRVEGGGTIDGNGKVWWRKSCKVNKSLAVTFYGCK 174 (299)
Q Consensus 104 ~snvtl~~~--g~l~~~~~~~~~~-------~~~~~~i~~~~~~ni~I~G~G~idG~g~~~w~~~~~~~~~~~i~~~~~~ 174 (299)
.++++|.+. |+|.+.... -|. ...+.++.+.+++|++|+|- ++..... | .+.+.+|+
T Consensus 71 ~~nv~I~G~~gG~IdG~G~~-~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i-~i~nsp~--~----------~i~i~~~~ 136 (339)
T 1ia5_A 71 GSDLTITGASGHSINGDGSR-WWDGEGGNGGKTKPKFFAAHSLTNSVISGL-KIVNSPV--Q----------VFSVAGSD 136 (339)
T ss_dssp EESCEEEECTTCEEECCGGG-TCSSCTTTSSSCCCCCEEEEEEEEEEEESC-EEECCSS--C----------CEEEESCE
T ss_pred cCcEEEEcCCCeEEeCCCCc-cccccccCCCCCCCeEEEEeecCcEEEEEE-EEEcCCc--c----------eEEEeccc
Confidence 378888886 677766432 232 12345799999999999993 4433221 2 59999999
Q ss_pred cEEEEeEEEEcCC--------CceEEEeceeeEEEEeEEEECCCCCCCCCeeeeeceecEEEEeeEEEcCCccEEecC--
Q 043061 175 NVRVSSLRFRNSQ--------KMHLTFQYCVNVRALNLLVIAPGNSPNTDGIHVTGTQNILIKNCVIRTGDDCISIVS-- 244 (299)
Q Consensus 175 nv~I~~v~i~ns~--------~~~i~~~~s~nv~i~~~~I~~~~~~~~~DGi~~~~s~~v~I~n~~i~~gDD~iai~s-- 244 (299)
|++|++++|.+++ ..+|++..|+||+|+||.|.. ..|+|.+.+++||+|+||++..++ +++|++
T Consensus 137 nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~n~~~~~gh-GisiGS~g 210 (339)
T 1ia5_A 137 YLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYN-----QDDCVAVNSGENIYFSGGYCSGGH-GLSIGSVG 210 (339)
T ss_dssp EEEEESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEEC-----SSCSEEESSEEEEEEESCEEESSS-CEEEEEEC
T ss_pred CeEEeeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEc-----CCCeEEEeCCeEEEEEeEEEECCc-eEEECcCC
Confidence 9999999999752 335999999999999999987 679999999999999999999876 699976
Q ss_pred -----CcEeEEEEeeEEcCC-ceEEEeecCCCCCcccEEEEEEEeeEEeCCce-eEEEEe
Q 043061 245 -----GSKNVRATDIICGPG-HGISIGSLGAGNSEAFVSNVLVNRARLSGTTN-GVRIKT 297 (299)
Q Consensus 245 -----gs~ni~I~n~~~~~~-~Gi~igs~~~~~~~~~v~nv~i~n~~~~~~~~-gi~ik~ 297 (299)
+.+||+|+||++.++ +||.|.+... ....++||+|+|++|.+..+ +|.|..
T Consensus 211 ~~~~~~v~nV~v~n~~~~~t~~girIKt~~g--~~G~v~nI~~~ni~~~~v~~~~i~i~~ 268 (339)
T 1ia5_A 211 GRSDNTVKNVTFVDSTIINSDNGVRIKTNID--TTGSVSDVTYKDITLTSIAKYGIVVQQ 268 (339)
T ss_dssp SSSCCEEEEEEEEEEEEESCSEEEEEEEETT--CCCEEEEEEEEEEEEEEESSEEEEEEE
T ss_pred cccCCCEEEEEEEeeEEECCCcEEEEEEeCC--CCcEEEeeEEEEEEEECcccccEEEEc
Confidence 259999999999876 5999988533 23579999999999999775 998864
No 27
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.66 E-value=1.1e-14 Score=133.81 Aligned_cols=170 Identities=21% Similarity=0.266 Sum_probs=135.9
Q ss_pred ccceEEEEe--eEEEEeeccCCCC-------CCCceeEEEeeeecEEEEeceEEeCCCcccccccccCCCceeEEEEccC
Q 043061 104 KSDLTMKIY--GTIKASVRLSDYS-------RDPRHWLVFENVNNFRVEGGGTIDGNGKVWWRKSCKVNKSLAVTFYGCK 174 (299)
Q Consensus 104 ~snvtl~~~--g~l~~~~~~~~~~-------~~~~~~i~~~~~~ni~I~G~G~idG~g~~~w~~~~~~~~~~~i~~~~~~ 174 (299)
.++++|.+. |+|.+... .-|. ...+.++.+.+++|++|+|- ++.... .| .+++. |+
T Consensus 67 ~~nv~I~G~~gG~IdG~G~-~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i-~i~nsp--~~----------~i~i~-~~ 131 (336)
T 1nhc_A 67 GKDLTVTMADGAVIDGDGS-RWWDSKGTNGGKTKPKFMYIHDVEDSTFKGI-NIKNTP--VQ----------AISVQ-AT 131 (336)
T ss_dssp EESCEEEECTTCEEECCGG-GTCCSCTTTSSSCCCCCEEEEEEEEEEEESC-EEECCS--SC----------CEEEE-EE
T ss_pred cCCEEEEcCCCeEEECCcc-ccccccCcCCCCCCceEEEEeeeCcEEEEEE-EEEeCC--cc----------EEEEE-eC
Confidence 378999886 68876653 2232 12345789999999999993 443322 12 59999 99
Q ss_pred cEEEEeEEEEcCC--------CceEEEeceeeEEEEeEEEECCCCCCCCCeeeeeceecEEEEeeEEEcCCccEEecC--
Q 043061 175 NVRVSSLRFRNSQ--------KMHLTFQYCVNVRALNLLVIAPGNSPNTDGIHVTGTQNILIKNCVIRTGDDCISIVS-- 244 (299)
Q Consensus 175 nv~I~~v~i~ns~--------~~~i~~~~s~nv~i~~~~I~~~~~~~~~DGi~~~~s~~v~I~n~~i~~gDD~iai~s-- 244 (299)
|++|++++|.+++ ..+|++..|+||+|+||.|.. ..|+|.+.+++||+|+||++..++ +|+|++
T Consensus 132 nv~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~-----gDDciaiksg~nI~i~n~~~~~gh-GisiGS~g 205 (336)
T 1nhc_A 132 NVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKN-----QDDCIAINSGESISFTGGTCSGGH-GLSIGSVG 205 (336)
T ss_dssp EEEEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEES-----SSEEEEESSEEEEEEESCEEESSS-EEEEEEES
T ss_pred CEEEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEc-----CCCEEEEeCCeEEEEEeEEEECCc-CceEccCc
Confidence 9999999999863 346999999999999999987 679999999999999999999886 699977
Q ss_pred -----CcEeEEEEeeEEcCC-ceEEEeecCCCCCcccEEEEEEEeeEEeCCce-eEEEE
Q 043061 245 -----GSKNVRATDIICGPG-HGISIGSLGAGNSEAFVSNVLVNRARLSGTTN-GVRIK 296 (299)
Q Consensus 245 -----gs~ni~I~n~~~~~~-~Gi~igs~~~~~~~~~v~nv~i~n~~~~~~~~-gi~ik 296 (299)
+.+||+|+||++.++ +|+.|.+... ....++||+|+|++|.+..+ +|.|.
T Consensus 206 ~~~~~~v~nV~v~n~~~~~t~~girIkt~~g--~~G~v~nI~~~ni~~~~v~~~~i~i~ 262 (336)
T 1nhc_A 206 GRDDNTVKNVTISDSTVSNSANGVRIKTIYK--ETGDVSEITYSNIQLSGITDYGIVIE 262 (336)
T ss_dssp SSSCCEEEEEEEEEEEEESCSEEEEEEEETT--CCCEEEEEEEEEEEEEEESSEEEEEE
T ss_pred cccCCCEEEEEEEeeEEECCCcEEEEEEECC--CCCEEeeeEEeeEEeeccccccEEEE
Confidence 259999999999876 5999988532 23579999999999999875 98885
No 28
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.63 E-value=1.7e-14 Score=133.73 Aligned_cols=170 Identities=16% Similarity=0.213 Sum_probs=135.7
Q ss_pred ccceEEEE--eeEEEEeeccCCCC------CCCceeEEEeeeecEEEEeceEEeCCCcccccccccCCCceeEEEEccCc
Q 043061 104 KSDLTMKI--YGTIKASVRLSDYS------RDPRHWLVFENVNNFRVEGGGTIDGNGKVWWRKSCKVNKSLAVTFYGCKN 175 (299)
Q Consensus 104 ~snvtl~~--~g~l~~~~~~~~~~------~~~~~~i~~~~~~ni~I~G~G~idG~g~~~w~~~~~~~~~~~i~~~~~~n 175 (299)
.++++|.+ .|+|.+... .-|. ..++.++.+.+++|++|+| -++.... . | .+++. |+|
T Consensus 94 ~~nv~I~G~~~g~IdG~G~-~~w~~~~~~~~~rP~~i~~~~~~nv~i~~-iti~nsp-~-~----------~i~i~-~~n 158 (362)
T 1czf_A 94 GEHITVTGASGHLINCDGA-RWWDGKGTSGKKKPKFFYAHGLDSSSITG-LNIKNTP-L-M----------AFSVQ-AND 158 (362)
T ss_dssp EESCEEEECTTCEEECCGG-GTCCSCTTSSSCCCCCEEEEEEETEEEES-CEEECCS-S-C----------CEEEE-CSS
T ss_pred CccEEEEcCCCcEEECCCc-hhhcccCCCCCCCCeEEEEeecccEEEEE-EEEecCC-c-c----------EEEEe-eCC
Confidence 37888988 478776643 1232 1235679999999999999 4454322 1 3 49999 999
Q ss_pred EEEEeEEEEcC-------C-CceEEEeceeeEEEEeEEEECCCCCCCCCeeeeeceecEEEEeeEEEcCCccEEecCC--
Q 043061 176 VRVSSLRFRNS-------Q-KMHLTFQYCVNVRALNLLVIAPGNSPNTDGIHVTGTQNILIKNCVIRTGDDCISIVSG-- 245 (299)
Q Consensus 176 v~I~~v~i~ns-------~-~~~i~~~~s~nv~i~~~~I~~~~~~~~~DGi~~~~s~~v~I~n~~i~~gDD~iai~sg-- 245 (299)
++|++++|.++ + ..++++..|+||+|+||.|.+ ..|+|.+.+++||+|+||++..+. +++|++-
T Consensus 159 v~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~n~~~~~gh-GisiGS~G~ 232 (362)
T 1czf_A 159 ITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHN-----QDDCLAVNSGENIWFTGGTCIGGH-GLSIGSVGD 232 (362)
T ss_dssp EEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEEC-----SSCSEEESSEEEEEEESCEEESSC-CEEEEEECS
T ss_pred EEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEec-----CCCEEEEeCCeEEEEEEEEEeCCc-eeEEeeccc
Confidence 99999999974 2 236999999999999999997 679999998999999999999876 7999771
Q ss_pred -----cEeEEEEeeEEcCC-ceEEEeecCCCCCcccEEEEEEEeeEEeCCc-eeEEEE
Q 043061 246 -----SKNVRATDIICGPG-HGISIGSLGAGNSEAFVSNVLVNRARLSGTT-NGVRIK 296 (299)
Q Consensus 246 -----s~ni~I~n~~~~~~-~Gi~igs~~~~~~~~~v~nv~i~n~~~~~~~-~gi~ik 296 (299)
.+||+|+||++.++ .|+.|.+... ....|+||+|+|++|.+.. ++|.|.
T Consensus 233 ~~~~~v~nV~v~n~~~~~t~~GirIKt~~g--~~G~v~nI~~~ni~~~~v~~~~i~I~ 288 (362)
T 1czf_A 233 RSNNVVKNVTIEHSTVSNSENAVRIKTISG--ATGSVSEITYSNIVMSGISDYGVVIQ 288 (362)
T ss_dssp SSCCEEEEEEEEEEEEEEEEEEEEEEEETT--CCEEEEEEEEEEEEEEEEEEEEEEEE
T ss_pred cCCCCEEEEEEEeeEEECCceEEEEEEeCC--CCceEeeEEEEeEEEECcccccEEEE
Confidence 58999999999875 5999987532 2357999999999999986 799885
No 29
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.58 E-value=1.1e-13 Score=130.79 Aligned_cols=147 Identities=17% Similarity=0.168 Sum_probs=121.9
Q ss_pred CceeEEEeeeecEEEEeceEEeCCCcccccccccCCCceeEEEEccCcEEEEeEEEEcC---CCceEEEeceeeEEEEeE
Q 043061 128 PRHWLVFENVNNFRVEGGGTIDGNGKVWWRKSCKVNKSLAVTFYGCKNVRVSSLRFRNS---QKMHLTFQYCVNVRALNL 204 (299)
Q Consensus 128 ~~~~i~~~~~~ni~I~G~G~idG~g~~~w~~~~~~~~~~~i~~~~~~nv~I~~v~i~ns---~~~~i~~~~s~nv~i~~~ 204 (299)
.+..+.+.+++|++|+| -+|.... . | .+.+..|+|++|++++|.+. ...+|++.. +||+|+||
T Consensus 126 rp~~i~~~~~~nv~I~~-iti~nsp-~-~----------~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~-~nV~I~n~ 191 (422)
T 1rmg_A 126 GARILRLTDVTHFSVHD-IILVDAP-A-F----------HFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWG-SNIWVHDV 191 (422)
T ss_dssp CCEEEEEEEEEEEEEEE-EEEECCS-S-C----------SEEEEEEEEEEEEEEEEECCSSTTCCSEEEEE-EEEEEEEE
T ss_pred CceEEEEcccceEEEEC-eEEECCC-c-e----------EEEEeCcCCEEEEeEEEECCCCCCCccEeecC-CeEEEEee
Confidence 45678999999999999 4444322 1 2 59999999999999999972 244699988 99999999
Q ss_pred EEECCCCCCCCCeeeeec-eecEEEEeeEEEcCCccEEecCC-----cEeEEEEeeEEcCC-ceEEEeecCCCCCcccEE
Q 043061 205 LVIAPGNSPNTDGIHVTG-TQNILIKNCVIRTGDDCISIVSG-----SKNVRATDIICGPG-HGISIGSLGAGNSEAFVS 277 (299)
Q Consensus 205 ~I~~~~~~~~~DGi~~~~-s~~v~I~n~~i~~gDD~iai~sg-----s~ni~I~n~~~~~~-~Gi~igs~~~~~~~~~v~ 277 (299)
.|.. ..|+|.+.+ ++||+|+||++..+. +++|++. .+||+|+||++.+. +||.|.+.+. ...++
T Consensus 192 ~i~~-----gDD~Iai~s~~~nI~I~n~~~~~~~-GisIGS~g~~~~v~nV~v~n~~~~~~~~Gi~Ikt~~g---~G~v~ 262 (422)
T 1rmg_A 192 EVTN-----KDECVTVKSPANNILVESIYCNWSG-GCAMGSLGADTDVTDIVYRNVYTWSSNQMYMIKSNGG---SGTVS 262 (422)
T ss_dssp EEES-----SSEEEEEEEEEEEEEEEEEEEESSS-EEEEEEECTTEEEEEEEEEEEEEESSSCSEEEEEBBC---CEEEE
T ss_pred EEeC-----CCCeEEeCCCCcCEEEEeEEEcCCc-ceeecccCCCCcEEEEEEEeEEEeccceEEEEEecCC---CcEEE
Confidence 9986 679999986 999999999998775 9999662 58999999999875 5999987532 24799
Q ss_pred EEEEEeeEEeCCceeEEEEe
Q 043061 278 NVLVNRARLSGTTNGVRIKT 297 (299)
Q Consensus 278 nv~i~n~~~~~~~~gi~ik~ 297 (299)
||+|+|++|.+..++|.|..
T Consensus 263 nI~~~NI~~~~v~~~i~i~~ 282 (422)
T 1rmg_A 263 NVLLENFIGHGNAYSLDIDG 282 (422)
T ss_dssp EEEEEEEEEEEESCSEEEET
T ss_pred EEEEEeEEEECccccEEEEe
Confidence 99999999999999998863
No 30
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.57 E-value=7.1e-14 Score=135.89 Aligned_cols=187 Identities=12% Similarity=0.077 Sum_probs=138.9
Q ss_pred cE-EEecCCeeEEeeeeeeeCCCccceEEEEeeEEEEeecc------CCCCC--CCceeEEEe------eeecEEEEece
Q 043061 82 AV-LVVPNNKIYHLKPITFSGPCKSDLTMKIYGTIKASVRL------SDYSR--DPRHWLVFE------NVNNFRVEGGG 146 (299)
Q Consensus 82 ~~-v~iP~G~~Y~~~~l~l~~p~~snvtl~~~g~l~~~~~~------~~~~~--~~~~~i~~~------~~~ni~I~G~G 146 (299)
.+ |++++| .++.+.+.+.+ ..|++|.+.|+|.+.... ..|.. .....+.+. +|+||+|+|-.
T Consensus 265 vt~L~L~~G-A~l~g~i~~~~--~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~Git 341 (574)
T 1ogo_X 265 TYWVYLAPG-AYVKGAIEYFT--KQNFYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPT 341 (574)
T ss_dssp CCEEEECTT-EEEESCEEECC--SSCEEEESSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEESCE
T ss_pred CceEEecCC-cEEEccEEEeC--ceeEEEEeCEEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEECeE
Confidence 45 889999 88888888876 679999988998766421 11111 112223333 89999999965
Q ss_pred EEeCCCcccccccccCCCceeEEEEccCcE--EEEeEEEEcCCCc---eEEEeceeeEEEEeEEEECCCCCCCCCeeeee
Q 043061 147 TIDGNGKVWWRKSCKVNKSLAVTFYGCKNV--RVSSLRFRNSQKM---HLTFQYCVNVRALNLLVIAPGNSPNTDGIHVT 221 (299)
Q Consensus 147 ~idG~g~~~w~~~~~~~~~~~i~~~~~~nv--~I~~v~i~ns~~~---~i~~~~s~nv~i~~~~I~~~~~~~~~DGi~~~ 221 (299)
+.+. .. | .+++.+|+|| +|+++++.+++.+ +|++. +||+|+||.|.+ +.|+|.+.
T Consensus 342 i~NS--p~-w----------~i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~-----gDDcIaIk 401 (574)
T 1ogo_X 342 INAP--PF-N----------TMDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHV-----NDDAIKIY 401 (574)
T ss_dssp EECC--SS-C----------SEEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEE-----SSCSEECC
T ss_pred EECC--CC-c----------EEeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEEC-----CCCEEEEC
Confidence 5553 33 3 3889999999 9999999876555 58877 999999999998 67899887
Q ss_pred ceecEEEEeeEEEcCCc-c-EEecC---CcEeEEEEeeEEcCCc---------eEEEeecCCCC------CcccEEEEEE
Q 043061 222 GTQNILIKNCVIRTGDD-C-ISIVS---GSKNVRATDIICGPGH---------GISIGSLGAGN------SEAFVSNVLV 281 (299)
Q Consensus 222 ~s~~v~I~n~~i~~gDD-~-iai~s---gs~ni~I~n~~~~~~~---------Gi~igs~~~~~------~~~~v~nv~i 281 (299)
+ +||+|+||++..+.. + |++++ ..+||+|+||++..+. |..+|++.-+. ....| ||+|
T Consensus 402 s-~NI~I~nc~i~~g~g~g~IsIGS~~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~gV-NI~f 479 (574)
T 1ogo_X 402 Y-SGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSRKSI-SMTV 479 (574)
T ss_dssp S-TTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEEE-EEEE
T ss_pred C-ccEEEEeEEEECCCCCceEEEcCCCCcEEEEEEEeEEEECCcccceeccccceeeccccccccccccCCCceE-EEEE
Confidence 6 999999999998763 5 89986 3699999999996532 45566653211 01118 9999
Q ss_pred EeeEEeCCceeE
Q 043061 282 NRARLSGTTNGV 293 (299)
Q Consensus 282 ~n~~~~~~~~gi 293 (299)
+|++|.+..+++
T Consensus 480 ~NI~~~~v~~~i 491 (574)
T 1ogo_X 480 SNVVCEGLCPSL 491 (574)
T ss_dssp EEEEECSSBCEE
T ss_pred EeEEEEceeEee
Confidence 999999988875
No 31
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.57 E-value=8.4e-14 Score=127.71 Aligned_cols=170 Identities=18% Similarity=0.120 Sum_probs=133.8
Q ss_pred cceEEEE-eeEEEEeeccCCCC-------CCCceeEEEeeeecEEEEeceEEeCCCcccccccccCCCceeEEEEccCc-
Q 043061 105 SDLTMKI-YGTIKASVRLSDYS-------RDPRHWLVFENVNNFRVEGGGTIDGNGKVWWRKSCKVNKSLAVTFYGCKN- 175 (299)
Q Consensus 105 snvtl~~-~g~l~~~~~~~~~~-------~~~~~~i~~~~~~ni~I~G~G~idG~g~~~w~~~~~~~~~~~i~~~~~~n- 175 (299)
.+++|.+ .|+|.+.... -|. ..++.++.+.+++ ++|+| -++.... . | .+++.+|+|
T Consensus 66 ~ni~I~G~~G~idG~G~~-ww~~~~~~~~~~rP~~i~~~~~~-v~i~g-iti~nsp-~-~----------~i~i~~~~n~ 130 (335)
T 1k5c_A 66 TGINFVGADHIFDGNGAL-YWDGKGTNNGTHKPHPFLKIKGS-GTYKK-FEVLNSP-A-Q----------AISVGPTDAH 130 (335)
T ss_dssp EEEEEECTTCEEECCGGG-TCCSCTTTSSSCCCCCSEEEEEE-EEEES-CEEESCS-S-C----------CEEEEEEEEE
T ss_pred cCEEEEeCccEEcCChhH-hhhcccccCCCCCCeEEEEeceE-EEEEE-EEEECCC-c-c----------eEEEEccCCe
Confidence 6888888 4888776531 221 1235678889999 99999 3443322 2 2 599999999
Q ss_pred EEEEeEEEEcC--------CC-ceEEEeceeeEEEEeEEEECCCCCCCCCeeeeeceecEEEEeeEEEcCCccEEecCC-
Q 043061 176 VRVSSLRFRNS--------QK-MHLTFQYCVNVRALNLLVIAPGNSPNTDGIHVTGTQNILIKNCVIRTGDDCISIVSG- 245 (299)
Q Consensus 176 v~I~~v~i~ns--------~~-~~i~~~~s~nv~i~~~~I~~~~~~~~~DGi~~~~s~~v~I~n~~i~~gDD~iai~sg- 245 (299)
|+|+++++.++ |. -++++ .|+||+|+||.|.+ ..|+|.+.+++||+|+||++..++ +++|++.
T Consensus 131 v~i~~v~I~~~~~d~~~~~~NtDGidi-~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~n~~~~~gh-GisIGS~g 203 (335)
T 1k5c_A 131 LTLDGITVDDFAGDTKNLGHNTDGFDV-SANNVTIQNCIVKN-----QDDCIAINDGNNIRFENNQCSGGH-GISIGSIA 203 (335)
T ss_dssp EEEESCEEECGGGGGGGCCCSCCSEEE-ECSSEEEESCEEES-----SSCSEEEEEEEEEEEESCEEESSC-CEEEEEEC
T ss_pred EEEEEEEEECCCCcccccCCCCCeEcc-cCCeEEEEeeEEEc-----CCCEEEeeCCeeEEEEEEEEECCc-cCeEeecc
Confidence 99999999985 22 25999 99999999999997 679999998899999999999875 6999753
Q ss_pred ----cEeEEEEeeEEcCC-ceEEEeecCCCCCcccEEEEEEEeeEEeCCc-eeEEEEe
Q 043061 246 ----SKNVRATDIICGPG-HGISIGSLGAGNSEAFVSNVLVNRARLSGTT-NGVRIKT 297 (299)
Q Consensus 246 ----s~ni~I~n~~~~~~-~Gi~igs~~~~~~~~~v~nv~i~n~~~~~~~-~gi~ik~ 297 (299)
.+||+|+||++.++ .|+.|.+...+ ....|+||+|+|++|.+.. ++|.|..
T Consensus 204 ~~~~v~nV~v~n~~~~~t~~girIKt~~g~-~~G~v~nI~f~ni~~~~v~~~~i~i~~ 260 (335)
T 1k5c_A 204 TGKHVSNVVIKGNTVTRSMYGVRIKAQRTA-TSASVSGVTYDANTISGIAKYGVLISQ 260 (335)
T ss_dssp TTCEEEEEEEESCEEEEEEEEEEEEEETTC-CSCEEEEEEEESCEEEEEEEEEEEEEE
T ss_pred CCCCEEEEEEEeeEEECCCceEEEEEeCCC-CcceEeeeEEEEEEEEccccccEEEEe
Confidence 48999999999876 59999876321 1146999999999999986 7998863
No 32
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.47 E-value=7.2e-13 Score=128.68 Aligned_cols=189 Identities=13% Similarity=0.134 Sum_probs=134.0
Q ss_pred cE-EEecCCeeEEeeeeeeeCCCccceEEEEeeEEEEeecc------CCCCC---CCceeEEE------eeeecEEEEec
Q 043061 82 AV-LVVPNNKIYHLKPITFSGPCKSDLTMKIYGTIKASVRL------SDYSR---DPRHWLVF------ENVNNFRVEGG 145 (299)
Q Consensus 82 ~~-v~iP~G~~Y~~~~l~l~~p~~snvtl~~~g~l~~~~~~------~~~~~---~~~~~i~~------~~~~ni~I~G~ 145 (299)
.+ |++++| .|+.+++.+.. ...|++|.+.|+|.+.... ..|.. .....+.+ .+|+|+.|+|-
T Consensus 223 ~~~L~l~~G-A~L~gs~~~~~-~~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~~~c~nV~I~Gi 300 (549)
T 1x0c_A 223 VTWVYFAPG-AYVKGAVEFLS-TASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVLNGV 300 (549)
T ss_dssp CCEEEECTT-EEEESCEEECC-CSSEEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECCSSCEEEEEESC
T ss_pred CCeEecCCC-CEEEEEEEEec-CceeEEEEeeEEEECCCceecccCcccccccccCCCceEEEeeccccCCceEEEEECc
Confidence 46 999999 88888887752 1468999888998876421 22211 01222333 89999999995
Q ss_pred eEEeCCCcccccccccCCCceeEEEE-cc-Cc--EEEEeEEEEcCCCc---eEEEeceeeEEEEeEEEECCCCCCCCCee
Q 043061 146 GTIDGNGKVWWRKSCKVNKSLAVTFY-GC-KN--VRVSSLRFRNSQKM---HLTFQYCVNVRALNLLVIAPGNSPNTDGI 218 (299)
Q Consensus 146 G~idG~g~~~w~~~~~~~~~~~i~~~-~~-~n--v~I~~v~i~ns~~~---~i~~~~s~nv~i~~~~I~~~~~~~~~DGi 218 (299)
.+.+.. +| .+++. .| +| ++|+++++.+++.+ ++++. +||+|+||.|.+ ..|+|
T Consensus 301 ti~Nsp---~w----------~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i~~-----gDDcI 360 (549)
T 1x0c_A 301 TVSAPP---FN----------SMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFYHT-----DDDGL 360 (549)
T ss_dssp EEECCS---SC----------SEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEEEE-----SSCCE
T ss_pred EEECCC---ce----------eEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeEEeC-----CCCEE
Confidence 444432 33 36654 45 69 99999999875443 57777 999999999998 67899
Q ss_pred eeeceecEEEEeeEEEcCC-cc-EEecC---CcEeEEEEeeEEcCCc-------eEEEeec-----C---CC-CCcccEE
Q 043061 219 HVTGTQNILIKNCVIRTGD-DC-ISIVS---GSKNVRATDIICGPGH-------GISIGSL-----G---AG-NSEAFVS 277 (299)
Q Consensus 219 ~~~~s~~v~I~n~~i~~gD-D~-iai~s---gs~ni~I~n~~~~~~~-------Gi~igs~-----~---~~-~~~~~v~ 277 (299)
.+.+ +||+|+||++..+. .+ |++++ ..+||+|+||++..+. |..|.+. + .+ .....|+
T Consensus 361 aIks-~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~~d~~G~i~ 439 (549)
T 1x0c_A 361 KMYY-SNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSNHSTGNS 439 (549)
T ss_dssp ECCS-SSEEEEEEEEEECSSSCSEECCBSCCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSCCSCCCCBEE
T ss_pred EECC-CCEEEEeeEEEcCCCCceEEECCCCCcEEEEEEEeeEEECccccccccceEEEecccccccCccccCcCCCceEc
Confidence 8877 99999999998765 45 88875 3699999999996543 4335541 1 00 1134699
Q ss_pred EEEEEeeEEeCCc-eeE
Q 043061 278 NVLVNRARLSGTT-NGV 293 (299)
Q Consensus 278 nv~i~n~~~~~~~-~gi 293 (299)
||+|+|++|.+.. +|+
T Consensus 440 nI~f~NI~i~nv~~~g~ 456 (549)
T 1x0c_A 440 NMTVRNITWSNFRAEGS 456 (549)
T ss_dssp EEEEEEEEEEEEEEEEE
T ss_pred cEEEEeEEEEeEEEece
Confidence 9999999988865 554
No 33
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.42 E-value=3.6e-12 Score=121.21 Aligned_cols=126 Identities=11% Similarity=0.069 Sum_probs=99.4
Q ss_pred EccCcEEEEeE----EEEcCC----Cc-eEEEeceeeEEEEeEEEECCCCC--------CCCCeeeeeceecEEEEeeEE
Q 043061 171 YGCKNVRVSSL----RFRNSQ----KM-HLTFQYCVNVRALNLLVIAPGNS--------PNTDGIHVTGTQNILIKNCVI 233 (299)
Q Consensus 171 ~~~~nv~I~~v----~i~ns~----~~-~i~~~~s~nv~i~~~~I~~~~~~--------~~~DGi~~~~s~~v~I~n~~i 233 (299)
.+++|++|++- ++.... .+ .+.+..|+|++|+|+++.+...- .|+||+++ .|++|+|+||+|
T Consensus 106 ~~~~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w~ih~s~~V~i~NtDGi~i-~s~nV~I~n~~I 184 (464)
T 1h80_A 106 NIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNKTIFASILVDVTERNGRLH-WSRNGIIERIKQ 184 (464)
T ss_dssp SCEEEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCSCBSCSEEECEEEETTEEE-EEEEEEEEEEEE
T ss_pred cCccceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccceEeeceeeeeecCCCcee-eccCEEEeceEE
Confidence 56788888886 443221 12 37789999999999999874321 26799998 899999999999
Q ss_pred EcCCccEE--ecCCcEeEEEEeeEEcCCceEEEeecC----CCCCcccEEEEEEEeeEEeCCceeEEEEec
Q 043061 234 RTGDDCIS--IVSGSKNVRATDIICGPGHGISIGSLG----AGNSEAFVSNVLVNRARLSGTTNGVRIKTW 298 (299)
Q Consensus 234 ~~gDD~ia--i~sgs~ni~I~n~~~~~~~Gi~igs~~----~~~~~~~v~nv~i~n~~~~~~~~gi~ik~~ 298 (299)
.++|||+. ...+++||+|+||+|.+++||.|.+-. . .....++||+|+||+|.++.++|+||++
T Consensus 185 ~~gddgiGs~~~~~~~NV~V~n~~~~gg~GIrIktg~d~IG~-~~~g~v~NI~~~Ni~~~nv~~~I~I~p~ 254 (464)
T 1h80_A 185 NNALFGYGLIQTYGADNILFRNLHSEGGIALRMETDNLLMKN-YKQGGIRNIFADNIRCSKGLAAVMFGPH 254 (464)
T ss_dssp ESCCTTCEEEEESEEEEEEEEEEEEESSEEEEEECCCHHHHH-HTCCEEEEEEEEEEEEESSSEEEEEECT
T ss_pred ecCCCeEEecccCCEeEEEEEeeEEECCCEEEEEeCCceecc-CCCCcEEEEEEEeEEEECCceeEEEeCC
Confidence 99999885 345689999999999998899885430 1 1234699999999999999999999965
No 34
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.28 E-value=2.5e-10 Score=110.64 Aligned_cols=129 Identities=18% Similarity=0.122 Sum_probs=84.7
Q ss_pred CceeEEEeeeecEEEEeceEEeCCCcccccccccCCCceeEEEEccCcEEEEeEEEEcCCC-ceEEEec------eeeEE
Q 043061 128 PRHWLVFENVNNFRVEGGGTIDGNGKVWWRKSCKVNKSLAVTFYGCKNVRVSSLRFRNSQK-MHLTFQY------CVNVR 200 (299)
Q Consensus 128 ~~~~i~~~~~~ni~I~G~G~idG~g~~~w~~~~~~~~~~~i~~~~~~nv~I~~v~i~ns~~-~~i~~~~------s~nv~ 200 (299)
.+.++.|.+|+|++|++ -++.. +.. .++++.++.. .++++.. |+||+
T Consensus 133 RP~lI~f~~c~NV~I~g-Vti~N----------------------Sp~---~gI~I~~~~~NDGid~DGi~fd~~S~NV~ 186 (609)
T 3gq8_A 133 RESNLSIRACHNVYIRD-IEAVD----------------------CTL---HGIDITCGGLDYPYLGDGTTAPNPSENIW 186 (609)
T ss_dssp TTCSEEEESCEEEEEEE-EEEES----------------------CSS---CSEEEECSSSSCCCCCTTCCCSSCCEEEE
T ss_pred CccEEEEEeeceEEEEe-eEEEe----------------------CCC---CCeEEeCCCCCccccCCCccccccceeEE
Confidence 45679999999999998 23321 111 1222222211 2334444 88888
Q ss_pred EEeEEEECCCCCCCCCeeeeeceecEEEEeeEEEcC-----CccEEecCCcEeEEEEeeEEcCCc-eEEEeecCCCCCcc
Q 043061 201 ALNLLVIAPGNSPNTDGIHVTGTQNILIKNCVIRTG-----DDCISIVSGSKNVRATDIICGPGH-GISIGSLGAGNSEA 274 (299)
Q Consensus 201 i~~~~I~~~~~~~~~DGi~~~~s~~v~I~n~~i~~g-----DD~iai~sgs~ni~I~n~~~~~~~-Gi~igs~~~~~~~~ 274 (299)
|+||.|.. ...|||.+.+|++|+|+||++... ..++.|.++++||+|+||++.++. ||.|.+.+.+ .
T Consensus 187 I~Nc~I~~----tGDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt~~GIrIKt~~~~---~ 259 (609)
T 3gq8_A 187 IENCEATG----FGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHGDA---P 259 (609)
T ss_dssp EESCEEES----CSSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEEESSSEEEEEEECTTS---C
T ss_pred EEeeEEEe----cCCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEEECCCCEEEEEecCCC---C
Confidence 88888865 256888888888888888888543 467888877788888888887654 7888766433 3
Q ss_pred cEEEEEEEeeEEeCC
Q 043061 275 FVSNVLVNRARLSGT 289 (299)
Q Consensus 275 ~v~nv~i~n~~~~~~ 289 (299)
.++||+|+||...+.
T Consensus 260 ~v~NV~I~n~vs~~n 274 (609)
T 3gq8_A 260 AAYNISINGHMSVED 274 (609)
T ss_dssp CCEEEEEEEEEEESC
T ss_pred ccccEEEECCEeecC
Confidence 578888888755543
No 35
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.27 E-value=2.1e-10 Score=113.07 Aligned_cols=127 Identities=18% Similarity=0.126 Sum_probs=83.9
Q ss_pred CceeEEEeeeecEEEEeceEEeCCCcccccccccCCCceeEEEEccCcEEEEeEEEEcCCC-ceEEEec------eeeEE
Q 043061 128 PRHWLVFENVNNFRVEGGGTIDGNGKVWWRKSCKVNKSLAVTFYGCKNVRVSSLRFRNSQK-MHLTFQY------CVNVR 200 (299)
Q Consensus 128 ~~~~i~~~~~~ni~I~G~G~idG~g~~~w~~~~~~~~~~~i~~~~~~nv~I~~v~i~ns~~-~~i~~~~------s~nv~ 200 (299)
.+.+|.|.+|+|++|++ -++. ++.. .++++.++.. .++++.. |+||+
T Consensus 133 RP~lI~f~~ckNV~I~g-Vti~----------------------NSp~---~gI~I~np~~NDGid~DGi~fdi~S~NV~ 186 (772)
T 3gqn_A 133 RESNLSIRACHNVYIRD-IEAV----------------------DCTL---HGIDITCGGLDYPYLGDGTTAPNPSENIW 186 (772)
T ss_dssp TTCSEEEESCEEEEEEE-EEEE----------------------SCSS---CSEEEECSSSSCCCCCTTCCCSSCCEEEE
T ss_pred CccEEEEEeeceEEEEe-EEEE----------------------eCCC---CCEEEeCCCcCCcCCCcCcccccccceEE
Confidence 45678999999999998 2332 1111 2222322221 2344444 88888
Q ss_pred EEeEEEECCCCCCCCCeeeeeceecEEEEeeEEEcC-----CccEEecCCcEeEEEEeeEEcCCc-eEEEeecCCCCCcc
Q 043061 201 ALNLLVIAPGNSPNTDGIHVTGTQNILIKNCVIRTG-----DDCISIVSGSKNVRATDIICGPGH-GISIGSLGAGNSEA 274 (299)
Q Consensus 201 i~~~~I~~~~~~~~~DGi~~~~s~~v~I~n~~i~~g-----DD~iai~sgs~ni~I~n~~~~~~~-Gi~igs~~~~~~~~ 274 (299)
|+||.|.+ ...|||.+.+|+||+|+||++... ..+|.|.++++||+|+||++.++. ||.|.+.+.+ .
T Consensus 187 I~Nc~I~n----tGDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~nT~nGIRIKt~~~g---g 259 (772)
T 3gqn_A 187 IENCEATG----FGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHGDA---P 259 (772)
T ss_dssp EESCEEES----CSSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEESSSEEEEECCCTTS---C
T ss_pred EEeeEEEe----cCcCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEceEEECCCcEEEEEEeCCC---C
Confidence 88888865 246888888888888888888543 467888877788888888887654 7888765543 2
Q ss_pred cEEEEEEEeeEEe
Q 043061 275 FVSNVLVNRARLS 287 (299)
Q Consensus 275 ~v~nv~i~n~~~~ 287 (299)
.++||+|.++...
T Consensus 260 ~v~NV~I~gnis~ 272 (772)
T 3gqn_A 260 AAYNISINGHMSV 272 (772)
T ss_dssp CCEEEEEEEEEEE
T ss_pred ccccEEEECCEEe
Confidence 4788888765554
No 36
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.21 E-value=7.1e-10 Score=103.81 Aligned_cols=203 Identities=12% Similarity=0.161 Sum_probs=130.3
Q ss_pred CCCeEEEeecCCCC-CCC-cccHH-HHHHHHHHHhhcCCccEEEecCCeeEE--e-----eeeeeeCC--CccceEEEEe
Q 043061 45 SSTKIVNVDDFEAK-ADG-TDDSK-AFMEAWEEACSSENEAVLVVPNNKIYH--L-----KPITFSGP--CKSDLTMKIY 112 (299)
Q Consensus 45 ~~~~~~~v~d~Ga~-gdg-~Ddt~-Aiq~Ai~~a~~~~gg~~v~iP~G~~Y~--~-----~~l~l~~p--~~snvtl~~~ 112 (299)
..+..+.|..-|-. ++| +-..| .||+|++. + ++| .+|+|.+| +|. + ..|.+... ....++|+..
T Consensus 12 ~~~~~~yVsp~Gsd~~~G~t~~~P~tiq~Ai~~-a-~pG-dtI~l~~G-tY~~~~~e~~~~~i~~~~sGt~~~pIti~~~ 87 (400)
T 1ru4_A 12 STKRIYYVAPNGNSSNNGSSFNAPMSFSAAMAA-V-NPG-ELILLKPG-TYTIPYTQGKGNTITFNKSGKDGAPIYVAAA 87 (400)
T ss_dssp CCSCEEEECTTCCTTCCSSSTTSCBCHHHHHHH-C-CTT-CEEEECSE-EEECCCBTTBCCCEEECCCCBTTBCEEEEEG
T ss_pred cCccEEEEcCCCCCCCCCccccCCccHHHHHhh-C-CCC-CEEEECCC-eEccccccccceeEEecCCCCCCCCEEEEEe
Confidence 34567777654432 333 33222 69999963 4 344 79999999 998 2 44555310 0123777765
Q ss_pred e----EEEEeeccC-CCCCCCceeEEEeeeecEEEEeceEEeCCCcccccccccCCCceeEEEEccCcEEEEeEEEEcCC
Q 043061 113 G----TIKASVRLS-DYSRDPRHWLVFENVNNFRVEGGGTIDGNGKVWWRKSCKVNKSLAVTFYGCKNVRVSSLRFRNSQ 187 (299)
Q Consensus 113 g----~l~~~~~~~-~~~~~~~~~i~~~~~~ni~I~G~G~idG~g~~~w~~~~~~~~~~~i~~~~~~nv~I~~v~i~ns~ 187 (299)
+ +|. ...+. .|... ...|.+ ..++++|+| -+|...+.. +|++.. .+.+|++++|.+..
T Consensus 88 ~g~~~vI~-~~~~~g~~~~~-~~~i~i-~~~~~~i~g-l~I~n~g~~------------GI~v~g-s~~~i~n~~i~~n~ 150 (400)
T 1ru4_A 88 NCGRAVFD-FSFPDSQWVQA-SYGFYV-TGDYWYFKG-VEVTRAGYQ------------GAYVIG-SHNTFENTAFHHNR 150 (400)
T ss_dssp GGCCEEEE-CCCCTTCCCTT-CCSEEE-CSSCEEEES-EEEESCSSC------------SEEECS-SSCEEESCEEESCS
T ss_pred cCCCCEEe-CCccCCccccc-eeEEEE-ECCeEEEEe-EEEEeCCCC------------cEEEeC-CCcEEEeEEEECCC
Confidence 2 333 21111 11000 022433 457777777 455433321 477776 78899999999998
Q ss_pred CceEEEece-eeEEEEeEEEECCCC----CCCCCeeeeece--ecEEEEeeEEE-cCCccEEecCCcEeEEEEeeEEcC-
Q 043061 188 KMHLTFQYC-VNVRALNLLVIAPGN----SPNTDGIHVTGT--QNILIKNCVIR-TGDDCISIVSGSKNVRATDIICGP- 258 (299)
Q Consensus 188 ~~~i~~~~s-~nv~i~~~~I~~~~~----~~~~DGi~~~~s--~~v~I~n~~i~-~gDD~iai~sgs~ni~I~n~~~~~- 258 (299)
..+|.+... .+.+|++|.|....+ ..++|||.+..+ .+..|++|++. +.||++.+......++|+||....
T Consensus 151 ~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~~~~~~v~i~nn~a~~N 230 (400)
T 1ru4_A 151 NTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFDSPQKVVIENSWAFRN 230 (400)
T ss_dssp SCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSCSEECTTCCSCCEEESCEEEST
T ss_pred ceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecCCCcEEEEecCCCEEEEeEEEECC
Confidence 778998874 488999999987553 246899988743 68889999986 568999998767778999998731
Q ss_pred -------------CceEEEeecC
Q 043061 259 -------------GHGISIGSLG 268 (299)
Q Consensus 259 -------------~~Gi~igs~~ 268 (299)
+.||.+|+++
T Consensus 231 g~~~~~~n~~~gngnGf~lgg~~ 253 (400)
T 1ru4_A 231 GINYWNDSAFAGNGNGFKLGGNQ 253 (400)
T ss_dssp TCCCSCCTTCCCCCCSEECCCTT
T ss_pred ccccccccccccCCCCEEEeccC
Confidence 3478887653
No 37
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.14 E-value=5.8e-10 Score=109.93 Aligned_cols=66 Identities=20% Similarity=0.290 Sum_probs=54.9
Q ss_pred CCCeEEEeecCCCCCCC-cccHHHHHHHHHHHhhcCCccEEEecCCeeEEe-eeeeeeCCCccceEEEEee--EEEEe
Q 043061 45 SSTKIVNVDDFEAKADG-TDDSKAFMEAWEEACSSENEAVLVVPNNKIYHL-KPITFSGPCKSDLTMKIYG--TIKAS 118 (299)
Q Consensus 45 ~~~~~~~v~d~Ga~gdg-~Ddt~Aiq~Ai~~a~~~~gg~~v~iP~G~~Y~~-~~l~l~~p~~snvtl~~~g--~l~~~ 118 (299)
+....++|+||||+||| +|||+|||+||+ ++. ++.+|+||+| +|++ ++|.+ ++++.|.+++ +|.+.
T Consensus 396 ~~~~~vnVkd~GA~GDG~tDDT~Ai~~al~-aa~--~g~~v~~P~G-~Y~vt~Ti~i----p~~~~ivG~~~~~I~~~ 465 (758)
T 3eqn_A 396 APSDFVSVRSQGAKGDGHTDDTQAIKNVFA-KYA--GCKIIFFDAG-TYIVTDTIQI----PAGTQIVGEVWSVIMGT 465 (758)
T ss_dssp CGGGEEETTTTTCCCEEEEECHHHHHHHHH-HHT--TTSEEECCSE-EEEESSCEEE----CTTCEEECCSSEEEEEC
T ss_pred cccceEEeeeccccCCCCchhHHHHHHHHH-Hhc--CCCEEEECCC-EeEECCeEEc----CCCCEEEecccceEecC
Confidence 44569999999999999 999999999996 442 3379999999 9987 57999 8999998885 55554
No 38
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.98 E-value=3.7e-08 Score=90.56 Aligned_cols=42 Identities=17% Similarity=0.148 Sum_probs=28.1
Q ss_pred eEEEEccCcEEEEeEEEEcCC---------------CceEEEeceeeEEEEeEEEEC
Q 043061 167 AVTFYGCKNVRVSSLRFRNSQ---------------KMHLTFQYCVNVRALNLLVIA 208 (299)
Q Consensus 167 ~i~~~~~~nv~I~~v~i~ns~---------------~~~i~~~~s~nv~i~~~~I~~ 208 (299)
.|.+..++||.|+||+|++.. .-+|.+..+++|.|++|++..
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~ 153 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISD 153 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEec
Confidence 477778999999999998642 124555556666666666653
No 39
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=98.80 E-value=6e-08 Score=89.89 Aligned_cols=110 Identities=8% Similarity=0.025 Sum_probs=93.3
Q ss_pred eEEEEccCcEEEEeEEEEcCCCceEEEec-eeeEEEEeEEEECCCCCCCCCeeee--------eceecEEEEeeEEEc-C
Q 043061 167 AVTFYGCKNVRVSSLRFRNSQKMHLTFQY-CVNVRALNLLVIAPGNSPNTDGIHV--------TGTQNILIKNCVIRT-G 236 (299)
Q Consensus 167 ~i~~~~~~nv~I~~v~i~ns~~~~i~~~~-s~nv~i~~~~I~~~~~~~~~DGi~~--------~~s~~v~I~n~~i~~-g 236 (299)
+|.+.+|++.+|++.++.+....+|++.. |++++|+++.+.. +.+|+.+ ..+++++|++|.+.. .
T Consensus 174 GI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~-----~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n~ 248 (377)
T 2pyg_A 174 GFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYG-----NGSSGLVVQRGLEDLALPSNILIDGGAYYDNA 248 (377)
T ss_dssp SEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEES-----CSSCSEEEECCSSCCCCCEEEEEESCEEESCS
T ss_pred ceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEEC-----ccCceEEEeccccCCCCCccEEEECCEEEcCc
Confidence 68888999999999988888888999887 9999999999997 6678877 678999999999875 4
Q ss_pred CccEEecCCcEeEEEEeeEEcC--CceEEEeecCCCCCcccEEEEEEEeeEEeCCce
Q 043061 237 DDCISIVSGSKNVRATDIICGP--GHGISIGSLGAGNSEAFVSNVLVNRARLSGTTN 291 (299)
Q Consensus 237 DD~iai~sgs~ni~I~n~~~~~--~~Gi~igs~~~~~~~~~v~nv~i~n~~~~~~~~ 291 (299)
..++.+.. .++++|+||++.. ..||.|.. .++++|++++|.++..
T Consensus 249 ~~Gi~~~~-~~~v~i~~N~i~~~~~~GI~i~g---------~~~~~i~~N~i~~n~~ 295 (377)
T 2pyg_A 249 REGVLLKM-TSDITLQNADIHGNGSSGVRVYG---------AQDVQILDNQIHDNAQ 295 (377)
T ss_dssp SCSEEEEE-EEEEEEESCEEESCSSCSEEEEE---------EEEEEEESCEEESCCS
T ss_pred cCceEecc-ccCeEEECCEEECCCCceEEEec---------CCCcEEECcEEECCcc
Confidence 67888876 7999999999976 46999841 7899999999997643
No 40
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.76 E-value=3.7e-07 Score=83.98 Aligned_cols=63 Identities=11% Similarity=0.130 Sum_probs=44.6
Q ss_pred EEEE-ccCcEEEEeEEEEcC------CCceEEEeceeeEEEEeEEEECCCCCCCCCeee---eeceecEEEEeeEEEc
Q 043061 168 VTFY-GCKNVRVSSLRFRNS------QKMHLTFQYCVNVRALNLLVIAPGNSPNTDGIH---VTGTQNILIKNCVIRT 235 (299)
Q Consensus 168 i~~~-~~~nv~I~~v~i~ns------~~~~i~~~~s~nv~i~~~~I~~~~~~~~~DGi~---~~~s~~v~I~n~~i~~ 235 (299)
|.+. .++||.|++|+|++. ..-+|.+..+++|.|++|++.. ..|+.. ..++++|+|.+|.|..
T Consensus 126 l~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~-----~~d~~~~~g~~~s~~VTISnn~f~~ 198 (359)
T 1idk_A 126 LRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTAR-----IGRQHYVLGTSADNRVSLTNNYIDG 198 (359)
T ss_dssp EEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEE-----ESSCSEEECCCTTCEEEEESCEEEC
T ss_pred EEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeec-----CCCCcEEecccCcceEEEECcEecC
Confidence 6666 788888888888863 1245778888888888888875 234433 3467788888888863
No 41
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=98.75 E-value=1.1e-07 Score=88.51 Aligned_cols=19 Identities=16% Similarity=0.408 Sum_probs=13.9
Q ss_pred eEEEEccCcEEEEeEEEEcC
Q 043061 167 AVTFYGCKNVRVSSLRFRNS 186 (299)
Q Consensus 167 ~i~~~~~~nv~I~~v~i~ns 186 (299)
.|.+.. +||.|+||+|++.
T Consensus 144 gl~i~~-~NVIIrnl~i~~~ 162 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDA 162 (399)
T ss_dssp EEEECS-EEEEEESCEEECC
T ss_pred EEEeeC-CCEEEeCeEEecC
Confidence 366666 8888888888754
No 42
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.74 E-value=1.4e-07 Score=86.46 Aligned_cols=129 Identities=12% Similarity=0.152 Sum_probs=71.3
Q ss_pred ecEEEEec---eEEeCCCcccccccccCCCceeEEEEccCcEEEEeEEEEcCC-CceEEEeceeeEEEEeEEEECCCCCC
Q 043061 138 NNFRVEGG---GTIDGNGKVWWRKSCKVNKSLAVTFYGCKNVRVSSLRFRNSQ-KMHLTFQYCVNVRALNLLVIAPGNSP 213 (299)
Q Consensus 138 ~ni~I~G~---G~idG~g~~~w~~~~~~~~~~~i~~~~~~nv~I~~v~i~ns~-~~~i~~~~s~nv~i~~~~I~~~~~~~ 213 (299)
+++||.|. ..|.|.|. .|.+..++||.|++++|+++. .+.-.+..++.-. .+. ....
T Consensus 88 sn~TI~G~ga~~~i~G~G~-------------gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~-~g~-----~~~~ 148 (346)
T 1pxz_A 88 GHKTIDGRGADVHLGNGGP-------------CLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIG-VEP-----VHAQ 148 (346)
T ss_dssp SSEEEECTTSCEEEETTSC-------------CEEEESCEEEEEESCEEECCCCCCSEEEEEETTTE-EEE-----ECCC
T ss_pred CCeEEEccCCceEEeCCcc-------------eEEEEccCCEEEEeeEEEeeccCCCceEEeccCcc-ccc-----ccCC
Confidence 57788774 24554332 477778889999999988752 1100000000000 000 0124
Q ss_pred CCCeeeeeceecEEEEeeEEEcCCccE-EecCCcEeEEEEeeEEcCCc-eEEEeecCCCCCcccEEEEEEEeeEE
Q 043061 214 NTDGIHVTGTQNILIKNCVIRTGDDCI-SIVSGSKNVRATDIICGPGH-GISIGSLGAGNSEAFVSNVLVNRARL 286 (299)
Q Consensus 214 ~~DGi~~~~s~~v~I~n~~i~~gDD~i-ai~sgs~ni~I~n~~~~~~~-Gi~igs~~~~~~~~~v~nv~i~n~~~ 286 (299)
..|||.+.++++|.|++|+|..+.|++ .++.++.+|+|+||.|..-. ++-+|+..... .....+|++.+|.|
T Consensus 149 ~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~~s~~vTISnn~f~~H~k~~l~G~sd~~~-~d~~~~vT~~~N~f 222 (346)
T 1pxz_A 149 DGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYD-DDKSMKVTVAFNQF 222 (346)
T ss_dssp CCCSEEEESCEEEEEESCEEECCSSEEEEEESSCEEEEEESCEEESEEEEEEESCCSSCG-GGGGCEEEEESCEE
T ss_pred CCCEEEEecCceEEEEeeEEecCCCCcEeeccCcceEEEEeeEEecCCceeEECCCCccc-cCCceEEEEEeeEE
Confidence 567777777777777777777666654 46566777777777776432 55555442211 11224566666666
No 43
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.74 E-value=4.9e-07 Score=82.33 Aligned_cols=76 Identities=17% Similarity=0.184 Sum_probs=43.1
Q ss_pred eEEEEccCcEEEEeEEEEcCCCceEEEeceeeEEEEeEEEECCCCCCCCCeeeeeceecEEEEeeEEEcC-CccEEecCC
Q 043061 167 AVTFYGCKNVRVSSLRFRNSQKMHLTFQYCVNVRALNLLVIAPGNSPNTDGIHVTGTQNILIKNCVIRTG-DDCISIVSG 245 (299)
Q Consensus 167 ~i~~~~~~nv~I~~v~i~ns~~~~i~~~~s~nv~i~~~~I~~~~~~~~~DGi~~~~s~~v~I~n~~i~~g-DD~iai~sg 245 (299)
.|.+.+++||.|++++|++...... ........|+|.+.++++|.|++|.+..+ |.++.+..+
T Consensus 84 Gi~I~~a~NVIIrnl~i~~~~~~~~----------------~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~ 147 (340)
T 3zsc_A 84 GLVIKDAQNVIIRNIHFEGFYMEDD----------------PRGKKYDFDYINVENSHHIWIDHITFVNGNDGAVDIKKY 147 (340)
T ss_dssp EEEEESCEEEEEESCEEECCCCTTC----------------TTSCSSCCCSEEEESCEEEEEESCEEESCSSCSEEEETT
T ss_pred ceEEEcCceEEEeCeEEECCccccC----------------ccCCcCCCCeEEEecCCcEEEEeeeeccCCccceEEecC
Confidence 3666778888888888887521000 00011245666666666666666666544 333555555
Q ss_pred cEeEEEEeeEEcC
Q 043061 246 SKNVRATDIICGP 258 (299)
Q Consensus 246 s~ni~I~n~~~~~ 258 (299)
+.+|+|.||.|..
T Consensus 148 s~~vTISnn~f~~ 160 (340)
T 3zsc_A 148 SNYITVSWNKFVD 160 (340)
T ss_dssp CEEEEEESCEEES
T ss_pred CceEEEECcEecc
Confidence 6666666666654
No 44
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=98.74 E-value=2.1e-07 Score=89.33 Aligned_cols=176 Identities=9% Similarity=0.026 Sum_probs=101.3
Q ss_pred cHHHHHHHHHHHhhcCCccEEEecCCeeEEeeeeeeeCC--CccceEEEEe--e--EEEEeeccCCCCCCCceeEEEeee
Q 043061 64 DSKAFMEAWEEACSSENEAVLVVPNNKIYHLKPITFSGP--CKSDLTMKIY--G--TIKASVRLSDYSRDPRHWLVFENV 137 (299)
Q Consensus 64 dt~Aiq~Ai~~a~~~~gg~~v~iP~G~~Y~~~~l~l~~p--~~snvtl~~~--g--~l~~~~~~~~~~~~~~~~i~~~~~ 137 (299)
+.+.||+||+ +++ +| .+|+|++| +|.-..+.+.+. ....++|+.. + +|.+. ..+... .
T Consensus 30 ~~~~Lq~Ai~-~A~-pG-DtI~L~~G-tY~~~~i~i~~sGt~~~pItl~~~~~~~~vi~G~-----------~~l~i~-g 93 (506)
T 1dbg_A 30 SNETLYQVVK-EVK-PG-GLVQIADG-TYKDVQLIVSNSGKSGLPITIKALNPGKVFFTGD-----------AKVELR-G 93 (506)
T ss_dssp SHHHHHHHHH-HCC-TT-CEEEECSE-EEETCEEEECCCCBTTBCEEEEESSTTSEEEEES-----------CEEEEC-S
T ss_pred CHHHHHHHHH-hCC-CC-CEEEECCC-EEecceEEEecCCcCCCCEEEECCCCCccEEeCC-----------ceEEEE-c
Confidence 4567999996 343 34 79999999 997546666321 1245666654 1 12211 112222 3
Q ss_pred ecEEEEeceEEeCCCcccccccccCCCceeEEEEccCcEEEEeEEEEcCCCc-eEEEe--------ceeeEEEEeEEEEC
Q 043061 138 NNFRVEGGGTIDGNGKVWWRKSCKVNKSLAVTFYGCKNVRVSSLRFRNSQKM-HLTFQ--------YCVNVRALNLLVIA 208 (299)
Q Consensus 138 ~ni~I~G~G~idG~g~~~w~~~~~~~~~~~i~~~~~~nv~I~~v~i~ns~~~-~i~~~--------~s~nv~i~~~~I~~ 208 (299)
++++|+| -+|.+.+..... .. ......+.+. .++++|++++|.+.... .+.+. ..++.+|++|.|..
T Consensus 94 ~~v~i~G-L~i~~~~~~~~~-~~-~~~~~~iav~-G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n~I~~N~I~G 169 (506)
T 1dbg_A 94 EHLILEG-IWFKDGNRAIQA-WK-SHGPGLVAIY-GSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCSFTD 169 (506)
T ss_dssp SSEEEES-CEEEEECCCTTT-CC-TTSCCSEEEC-SSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSCEEESCEEEC
T ss_pred CCEEEEC-eEEECCCcceee-ee-cccccceEEe-cCCeEEEeeEEEcCCCCceeeEeecccceeeeccccEEECcEEEC
Confidence 5666666 344432210000 00 0011134444 58889999999887542 03332 56777899999987
Q ss_pred CCCCCCCC----eeeeec-------eecEEEEeeEEEc------CCccEEecCC---cEeEEEEeeEEcCC
Q 043061 209 PGNSPNTD----GIHVTG-------TQNILIKNCVIRT------GDDCISIVSG---SKNVRATDIICGPG 259 (299)
Q Consensus 209 ~~~~~~~D----Gi~~~~-------s~~v~I~n~~i~~------gDD~iai~sg---s~ni~I~n~~~~~~ 259 (299)
..+..... ||+++. +++..|++|+|.. +-+.+-++.. +++.+|+++.|...
T Consensus 170 k~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~~~~~N~~e~iR~G~h~m~s~~~~VenN~f~~~ 240 (506)
T 1dbg_A 170 KITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSNPQKPGNAGGGIRIGYYRNDIGRCLVDSNLFMRQ 240 (506)
T ss_dssp CCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEECCCSSSCCCSEEECSSTTCBCCCEEESCEEEEE
T ss_pred CcCcceEEecCceeEeccCcccccccCCeEEeCcEEcccccCCCccccEEEEEEecccCCcEEECCEEEec
Confidence 54433333 787775 3688899998874 3355666532 46777777777643
No 45
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.73 E-value=1e-07 Score=86.86 Aligned_cols=91 Identities=10% Similarity=0.061 Sum_probs=59.5
Q ss_pred eEEEE-ccCcEEEEeEEEEcCC----CceEEEe-----ceeeEEEEeEEEECCCCC------CCCCe-eeee-ceecEEE
Q 043061 167 AVTFY-GCKNVRVSSLRFRNSQ----KMHLTFQ-----YCVNVRALNLLVIAPGNS------PNTDG-IHVT-GTQNILI 228 (299)
Q Consensus 167 ~i~~~-~~~nv~I~~v~i~ns~----~~~i~~~-----~s~nv~i~~~~I~~~~~~------~~~DG-i~~~-~s~~v~I 228 (299)
.|.+. +++||.|++|+|++.. .-.|.+. .++||.|++|++....+. ..-|| +++. ++.+|+|
T Consensus 87 gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTI 166 (330)
T 2qy1_A 87 GIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTV 166 (330)
T ss_dssp EEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEE
T ss_pred eEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEE
Confidence 47777 8899999999998775 3457777 588888888888642210 01143 3544 5778888
Q ss_pred EeeEEEcCCccEEecCC-------cEeEEEEeeEEc
Q 043061 229 KNCVIRTGDDCISIVSG-------SKNVRATDIICG 257 (299)
Q Consensus 229 ~n~~i~~gDD~iai~sg-------s~ni~I~n~~~~ 257 (299)
.+|.|.+.+-+.-++.. ..+|++.+|.|.
T Consensus 167 Snn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f~ 202 (330)
T 2qy1_A 167 SYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFE 202 (330)
T ss_dssp ESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEEE
T ss_pred EcceeccCCeEEEECCCCccccCCCceEEEECcEEc
Confidence 88888765545544442 147777777774
No 46
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.71 E-value=9.4e-07 Score=81.35 Aligned_cols=63 Identities=13% Similarity=0.085 Sum_probs=46.2
Q ss_pred EEEE-ccCcEEEEeEEEEcCC------CceEEEeceeeEEEEeEEEECCCCCCCCCeee---eeceecEEEEeeEEEc
Q 043061 168 VTFY-GCKNVRVSSLRFRNSQ------KMHLTFQYCVNVRALNLLVIAPGNSPNTDGIH---VTGTQNILIKNCVIRT 235 (299)
Q Consensus 168 i~~~-~~~nv~I~~v~i~ns~------~~~i~~~~s~nv~i~~~~I~~~~~~~~~DGi~---~~~s~~v~I~n~~i~~ 235 (299)
|.+. .++||.|++|+|++.. .-+|.+..+++|.|++|++.. ..|+.. ..++++|+|.+|.|..
T Consensus 126 l~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~-----~~d~~~~~~~~~s~~vTISnn~f~~ 198 (359)
T 1qcx_A 126 LRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTAR-----IGRQHIVLGTSADNRVTISYSLIDG 198 (359)
T ss_dssp EEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEE-----ESSCSEEECSSCCEEEEEESCEEEC
T ss_pred EEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeec-----cCcCceeecccccccEEEECcEecC
Confidence 6776 7888888888888653 245788888888888888875 244432 2367888888888863
No 47
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=98.67 E-value=3.3e-07 Score=83.09 Aligned_cols=106 Identities=11% Similarity=0.138 Sum_probs=61.2
Q ss_pred eecEEEEece---EEeCCCcccccccccCCCceeEEEEccCcEEEEeEEEEcCC---CceEEEec-eeeEEEEeEEEECC
Q 043061 137 VNNFRVEGGG---TIDGNGKVWWRKSCKVNKSLAVTFYGCKNVRVSSLRFRNSQ---KMHLTFQY-CVNVRALNLLVIAP 209 (299)
Q Consensus 137 ~~ni~I~G~G---~idG~g~~~w~~~~~~~~~~~i~~~~~~nv~I~~v~i~ns~---~~~i~~~~-s~nv~i~~~~I~~~ 209 (299)
..|++|.|.| +|.|. .|.+..++||.|++++|++.. .-+|.+.. ++||.|++|++...
T Consensus 78 ~sn~TI~G~g~~~~i~G~---------------gl~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~ 142 (326)
T 3vmv_A 78 IKNISIIGVGTNGEFDGI---------------GIRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSE 142 (326)
T ss_dssp EEEEEEEECTTCCEEESC---------------CEEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCEEECC
T ss_pred CCCeEEEecCCCeEEeCc---------------EEEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeEEecc
Confidence 4788888753 45543 377778889999999888764 23466664 66666666666531
Q ss_pred C----CCCCCCee-eee-ceecEEEEeeEEEcCCccEEecCCc------EeEEEEeeEEc
Q 043061 210 G----NSPNTDGI-HVT-GTQNILIKNCVIRTGDDCISIVSGS------KNVRATDIICG 257 (299)
Q Consensus 210 ~----~~~~~DGi-~~~-~s~~v~I~n~~i~~gDD~iai~sgs------~ni~I~n~~~~ 257 (299)
. +....||. ++. ++.+|+|.+|.|..-+-+.-++... .+|++.+|.+.
T Consensus 143 ~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~~~~~vT~~~N~f~ 202 (326)
T 3vmv_A 143 FPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHWKTMLVGHTDNASLAPDKITYHHNYFN 202 (326)
T ss_dssp SSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEEECEEECSSSCGGGCCEEEEEESCEEE
T ss_pred ccCCcCccccCcceEecCCCceEEEEceEEecCceEEEECCCCCCcccCccEEEEeeEec
Confidence 1 11122332 333 4566666666666544444444321 35666666653
No 48
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.60 E-value=1.9e-06 Score=79.00 Aligned_cols=209 Identities=10% Similarity=0.070 Sum_probs=120.7
Q ss_pred CCeEEEeecCCCCCCCcc-cHHHHHHHHHHHhhcCCccEEEe-cCCeeEEe-eeeeeeCCCccceEEEEee---EEEEee
Q 043061 46 STKIVNVDDFEAKADGTD-DSKAFMEAWEEACSSENEAVLVV-PNNKIYHL-KPITFSGPCKSDLTMKIYG---TIKASV 119 (299)
Q Consensus 46 ~~~~~~v~d~Ga~gdg~D-dt~Aiq~Ai~~a~~~~gg~~v~i-P~G~~Y~~-~~l~l~~p~~snvtl~~~g---~l~~~~ 119 (299)
-.+++.|+..-. |..+ -.-.|+.|+. + .+..+|+| ..| ++.+ ++|.+ .+++||.+.| .|...
T Consensus 37 gG~v~~VT~~~d--~~~~~~~GsLr~av~-~---~~P~~Ivf~~~g-~I~l~~~l~V----~sn~TI~G~ga~~~i~G~- 104 (346)
T 1pxz_A 37 GGDFYTVTSTDD--NPVNPTPGTLRYGAT-R---EKALWIIFSQNM-NIKLKMPLYV----AGHKTIDGRGADVHLGNG- 104 (346)
T ss_dssp TSEEEEECCCCC--CTTSCCTTSHHHHHH-C---SSCEEEEESSCE-EECCSSCEEC----CSSEEEECTTSCEEEETT-
T ss_pred CccEEEECChHH--cccccCcchhHHHhc-c---CCCeEEEEcCCc-EEecCccEEe----cCCeEEEccCCceEEeCC-
Confidence 445777764211 1111 1223888884 2 23345555 445 7755 56777 6899998753 22220
Q ss_pred ccCCCCCCCceeEEEeeeecEEEEeceEEeCCCccc----ccccc------cCCCceeEEEEccCcEEEEeEEEEcCCCc
Q 043061 120 RLSDYSRDPRHWLVFENVNNFRVEGGGTIDGNGKVW----WRKSC------KVNKSLAVTFYGCKNVRVSSLRFRNSQKM 189 (299)
Q Consensus 120 ~~~~~~~~~~~~i~~~~~~ni~I~G~G~idG~g~~~----w~~~~------~~~~~~~i~~~~~~nv~I~~v~i~ns~~~ 189 (299)
..-|.+.+++||.|++ -.|......+ |.... .....-+|.+..++||.|++++|..+.--
T Consensus 105 ---------G~gi~i~~a~NVIIrn-l~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg 174 (346)
T 1pxz_A 105 ---------GPCLFMRKVSHVILHS-LHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSDCSDG 174 (346)
T ss_dssp ---------SCCEEEESCEEEEEES-CEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEECCSSE
T ss_pred ---------cceEEEEccCCEEEEe-eEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEecCCCC
Confidence 1235566788888888 3443221111 00000 00111178899999999999999988655
Q ss_pred eEEE-eceeeEEEEeEEEECCCCCCCCCeeeeec--------eecEEEEeeEE-EcC-CccEEecCCcEeEEEEeeEEcC
Q 043061 190 HLTF-QYCVNVRALNLLVIAPGNSPNTDGIHVTG--------TQNILIKNCVI-RTG-DDCISIVSGSKNVRATDIICGP 258 (299)
Q Consensus 190 ~i~~-~~s~nv~i~~~~I~~~~~~~~~DGi~~~~--------s~~v~I~n~~i-~~g-DD~iai~sgs~ni~I~n~~~~~ 258 (299)
.+.+ ..+++++|+++.|... ..++.+.. ..+|++++|.| .+. ...-.+.. ..+.|.||.+.+
T Consensus 175 ~id~~~~s~~vTISnn~f~~H-----~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~~~R~Pr~r~--g~~hv~NN~~~~ 247 (346)
T 1pxz_A 175 LIDVTLGSTGITISNNHFFNH-----HKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARY--GLVHVANNNYDP 247 (346)
T ss_dssp EEEEESSCEEEEEESCEEESE-----EEEEEESCCSSCGGGGGCEEEEESCEECSSEEECTTEEES--SEEEEESCEECC
T ss_pred cEeeccCcceEEEEeeEEecC-----CceeEECCCCccccCCceEEEEEeeEEeCCccccCccEec--ceEEEEeeEEEc
Confidence 5666 5899999999999852 12333322 24899999998 431 11111232 478899999875
Q ss_pred CceEEEeecCCCCCcccEEEEEEEeeEEeCCc
Q 043061 259 GHGISIGSLGAGNSEAFVSNVLVNRARLSGTT 290 (299)
Q Consensus 259 ~~Gi~igs~~~~~~~~~v~nv~i~n~~~~~~~ 290 (299)
-.+.+++... -..+.++++.|....
T Consensus 248 ~~~~~i~~~~-------~~~i~~egN~F~~~~ 272 (346)
T 1pxz_A 248 WNIYAIGGSS-------NPTILSEGNSFTAPS 272 (346)
T ss_dssp CSSCSEEEES-------CCEEEEESCEEECCS
T ss_pred ccceEEeccC-------CceEEEECCEEECCC
Confidence 3222233221 136789999998864
No 49
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=98.53 E-value=4.3e-06 Score=75.71 Aligned_cols=147 Identities=17% Similarity=0.176 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHhhcCC--ccEEEecCCeeEEeeeeeeeCCCccceEEEEeeEEEEeeccCCCCCCCceeEEEeeeecEEE
Q 043061 65 SKAFMEAWEEACSSEN--EAVLVVPNNKIYHLKPITFSGPCKSDLTMKIYGTIKASVRLSDYSRDPRHWLVFENVNNFRV 142 (299)
Q Consensus 65 t~Aiq~Ai~~a~~~~g--g~~v~iP~G~~Y~~~~l~l~~p~~snvtl~~~g~l~~~~~~~~~~~~~~~~i~~~~~~ni~I 142 (299)
-.-||+||+ +++... .-+|+|++| +|. ..+.+.- .+.+++|.+++. +..+|
T Consensus 19 f~TIq~AI~-aap~~~~~~~~I~I~~G-~Y~-E~V~I~~-~k~~Itl~G~g~-----------------------~~tiI 71 (319)
T 1gq8_A 19 YKTVSEAVA-AAPEDSKTRYVIRIKAG-VYR-ENVDVPK-KKKNIMFLGDGR-----------------------TSTII 71 (319)
T ss_dssp BSSHHHHHH-HSCSSCSSCEEEEECSE-EEE-CCEEECT-TCCSEEEEESCT-----------------------TTEEE
T ss_pred ccCHHHHHH-hccccCCceEEEEEcCC-eEe-eeeeccC-CCccEEEEEcCC-----------------------CccEE
Confidence 344999996 444321 138999999 995 4566621 145688776641 12222
Q ss_pred EeceEEeCCCcccccccccCCCceeEEEEccCcEEEEeEEEEcCCC------ceEEEeceeeEEEEeEEEECCCCCCCCC
Q 043061 143 EGGGTIDGNGKVWWRKSCKVNKSLAVTFYGCKNVRVSSLRFRNSQK------MHLTFQYCVNVRALNLLVIAPGNSPNTD 216 (299)
Q Consensus 143 ~G~G~idG~g~~~w~~~~~~~~~~~i~~~~~~nv~I~~v~i~ns~~------~~i~~~~s~nv~i~~~~I~~~~~~~~~D 216 (299)
+|.+.. ..+ +... +...+.+ .+++++++||+|+|+.. -.+.+ .++++.+.+|+|.. .-|
T Consensus 72 ~~~~~~-~~g---~~t~----~satv~v-~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~QD 136 (319)
T 1gq8_A 72 TASKNV-QDG---STTF----NSATVAA-VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILA-----YQD 136 (319)
T ss_dssp EECCCT-TTT---CCTG----GGCSEEE-CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEEC-----STT
T ss_pred Eecccc-cCC---CCcc----ceEEEEE-ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECc-----cce
Confidence 221100 000 0000 0012333 46777777777777642 12333 56777777777776 456
Q ss_pred eeeeeceecEEEEeeEEEcCCccEEecCCcEeEEEEeeEEc
Q 043061 217 GIHVTGTQNILIKNCVIRTGDDCISIVSGSKNVRATDIICG 257 (299)
Q Consensus 217 Gi~~~~s~~v~I~n~~i~~gDD~iai~sgs~ni~I~n~~~~ 257 (299)
++.....+ ..+++|+|...-|-|. |.....++||++.
T Consensus 137 TLy~~~~r-~~~~~c~I~G~vDFIf---G~~~a~f~~c~i~ 173 (319)
T 1gq8_A 137 SLYVHSNR-QFFINCFIAGTVDFIF---GNAAVVLQDCDIH 173 (319)
T ss_dssp CEEECSSE-EEEESCEEEESSSCEE---ESCEEEEESCEEE
T ss_pred eeeecCcc-EEEEecEEEeeeeEEe---cCCcEEEEeeEEE
Confidence 66666554 4777777776555443 2334677777663
No 50
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=98.52 E-value=1.5e-06 Score=79.89 Aligned_cols=42 Identities=10% Similarity=0.101 Sum_probs=26.6
Q ss_pred eEEE---EccCcEEEEeEEEEcCC---------------CceEEEec-eeeEEEEeEEEEC
Q 043061 167 AVTF---YGCKNVRVSSLRFRNSQ---------------KMHLTFQY-CVNVRALNLLVIA 208 (299)
Q Consensus 167 ~i~~---~~~~nv~I~~v~i~ns~---------------~~~i~~~~-s~nv~i~~~~I~~ 208 (299)
.|.+ .+++||.|+||+|++.. +..|.+.. ++||.|++|++..
T Consensus 104 gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~ 164 (361)
T 1pe9_A 104 SLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISD 164 (361)
T ss_dssp EEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEEC
T ss_pred EEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeec
Confidence 3667 57889999999988642 12355555 5555555555553
No 51
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=98.49 E-value=6.6e-07 Score=83.72 Aligned_cols=41 Identities=7% Similarity=0.067 Sum_probs=26.2
Q ss_pred eEEEEccCcEEEEeEEEEcCC-------------------CceEEEeceeeEEEEeEEEE
Q 043061 167 AVTFYGCKNVRVSSLRFRNSQ-------------------KMHLTFQYCVNVRALNLLVI 207 (299)
Q Consensus 167 ~i~~~~~~nv~I~~v~i~ns~-------------------~~~i~~~~s~nv~i~~~~I~ 207 (299)
.|.+..++||.|+||+|++.. +-.|.+..++||.|++|++.
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s 208 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFT 208 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEE
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEe
Confidence 477778888888888887542 12355555555555555555
No 52
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=98.46 E-value=4e-06 Score=75.88 Aligned_cols=148 Identities=14% Similarity=0.114 Sum_probs=77.6
Q ss_pred cHHHHHHHHHHHhhcCC--ccEEEecCCeeEEeeeeeeeCCCccceEEEEeeEEEEeeccCCCCCCCceeEEEeeeecEE
Q 043061 64 DSKAFMEAWEEACSSEN--EAVLVVPNNKIYHLKPITFSGPCKSDLTMKIYGTIKASVRLSDYSRDPRHWLVFENVNNFR 141 (299)
Q Consensus 64 dt~Aiq~Ai~~a~~~~g--g~~v~iP~G~~Y~~~~l~l~~p~~snvtl~~~g~l~~~~~~~~~~~~~~~~i~~~~~~ni~ 141 (299)
+-.-||+||+ +++... .-+|+|++| +|. ..+.+.- .+.+++|.+++. +..+
T Consensus 14 ~f~TIq~AI~-aap~~~~~~~~I~I~~G-~Y~-E~V~I~~-~k~~Itl~G~g~-----------------------~~ti 66 (317)
T 1xg2_A 14 DYQTLAEAVA-AAPDKSKTRYVIYVKRG-TYK-ENVEVAS-NKMNLMIVGDGM-----------------------YATT 66 (317)
T ss_dssp SBSSHHHHHH-HSCSSCSSCEEEEECSE-EEE-CCEEECT-TSCSEEEEESCT-----------------------TTEE
T ss_pred CcccHHHHHh-hcccCCCceEEEEEcCC-EEe-eeeecCC-CCCcEEEEEcCC-----------------------CCcE
Confidence 3344999996 444321 128999999 995 4566621 145688877641 1122
Q ss_pred EEeceEEeCCCcccccccccCCCceeEEEEccCcEEEEeEEEEcCCC------ceEEEeceeeEEEEeEEEECCCCCCCC
Q 043061 142 VEGGGTIDGNGKVWWRKSCKVNKSLAVTFYGCKNVRVSSLRFRNSQK------MHLTFQYCVNVRALNLLVIAPGNSPNT 215 (299)
Q Consensus 142 I~G~G~idG~g~~~w~~~~~~~~~~~i~~~~~~nv~I~~v~i~ns~~------~~i~~~~s~nv~i~~~~I~~~~~~~~~ 215 (299)
|+|.+.. ..+ +... +...+.+ .+++++++||+|+|+.. -.+.+ .++++.+.+|+|.. .-
T Consensus 67 I~~~~~~-~~g---~~t~----~satv~v-~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~Q 131 (317)
T 1xg2_A 67 ITGSLNV-VDG---STTF----RSATLAA-VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDA-----YQ 131 (317)
T ss_dssp EEECCCT-TTT---CCSG----GGCSEEE-CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEEC-----ST
T ss_pred EEecccc-cCC---Cccc----ceeEEEE-ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCc-----cc
Confidence 2221100 000 0000 0002333 56777777777777642 12333 46667777777775 45
Q ss_pred CeeeeeceecEEEEeeEEEcCCccEEecCCcEeEEEEeeEEc
Q 043061 216 DGIHVTGTQNILIKNCVIRTGDDCISIVSGSKNVRATDIICG 257 (299)
Q Consensus 216 DGi~~~~s~~v~I~n~~i~~gDD~iai~sgs~ni~I~n~~~~ 257 (299)
|++.....+ ..+++|+|...-|-|. |.....++||++.
T Consensus 132 DTLy~~~~r-~~~~~c~I~G~vDFIf---G~~~avf~~c~i~ 169 (317)
T 1xg2_A 132 DTLYAHSQR-QFYRDSYVTGTVDFIF---GNAAVVFQKCQLV 169 (317)
T ss_dssp TCEEECSSE-EEEESCEEEESSSCEE---ECCEEEEESCEEE
T ss_pred cceeecCcc-EEEEeeEEEeceeEEc---CCceEEEeeeEEE
Confidence 566655544 3667777765545442 2234666666663
No 53
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=98.40 E-value=3.6e-07 Score=88.30 Aligned_cols=156 Identities=17% Similarity=0.043 Sum_probs=98.1
Q ss_pred ccceEEEEeeEEEEeeccCCCCCC----CceeEEEeeeecEEEEeceEEeCCCcccccccccCCCceeEEE---EccCcE
Q 043061 104 KSDLTMKIYGTIKASVRLSDYSRD----PRHWLVFENVNNFRVEGGGTIDGNGKVWWRKSCKVNKSLAVTF---YGCKNV 176 (299)
Q Consensus 104 ~snvtl~~~g~l~~~~~~~~~~~~----~~~~i~~~~~~ni~I~G~G~idG~g~~~w~~~~~~~~~~~i~~---~~~~nv 176 (299)
..|++|.+.|+|.+.... -|... .++.+.+.+|+ |+| -++....+. | .+++ ..|+||
T Consensus 149 ~~NItItG~GtIDGqG~~-wW~~~~~~~~RP~l~f~~c~---I~G-ITi~NSDP~-w----------~I~iG~~~~c~NV 212 (600)
T 2x6w_A 149 LENCHIYGHGVVDFGGYE-FGASSQLRNGVAFGRSYNCS---VTG-ITFQNGDVT-W----------AITLGWNGYGSNC 212 (600)
T ss_dssp EEEEEEESSCEEECTTCC-CSSTTCCEEEEECCSEEEEE---EES-CEEESCCCS-C----------SEEECBTTBEEEE
T ss_pred ceeEEEecceeeeCCccc-cccccccCCCCCEEEEeeeE---EeC-eEEECCCCc-c----------EEEeCCCCCcccE
Confidence 467788877888775432 23211 11224556655 666 233222122 2 5888 899999
Q ss_pred EEEeEE----EEcCCC-ceEEEeceeeEEEEeEEEECCCCCCCCCeeee-ecee--cEEEEeeEEEcCCccEEecCC---
Q 043061 177 RVSSLR----FRNSQK-MHLTFQYCVNVRALNLLVIAPGNSPNTDGIHV-TGTQ--NILIKNCVIRTGDDCISIVSG--- 245 (299)
Q Consensus 177 ~I~~v~----i~ns~~-~~i~~~~s~nv~i~~~~I~~~~~~~~~DGi~~-~~s~--~v~I~n~~i~~gDD~iai~sg--- 245 (299)
+|++|+ +.++|. .+| |+|+||.|.+ ..|+|.+ .+.+ ++.++ .+..|..+|+|++.
T Consensus 213 tI~nvtfi~aI~sspNTDGI-------V~I~nc~I~t-----GDDCIAI~KSGs~~ni~~e--~~~~GHgGISIGSe~~g 278 (600)
T 2x6w_A 213 YVRKCRFINLVNSSVNADHS-------TVYVNCPYSG-----VESCYFSMSSSFARNIACS--VQLHQHDTFYRGSTVNG 278 (600)
T ss_dssp EEESCEEECCCCCSSCCCEE-------EEEECSSSEE-----EESCEEECCCTTHHHHEEE--EEECSSSEEEESCEEEE
T ss_pred EEeCeEEcceEecCCCCCEE-------EEEEeeEEec-----CCcEEEEecCCCcCCeEEE--EEcCCCCcEEecccccC
Confidence 999999 776442 234 8888888876 5677777 4322 34555 44555556666541
Q ss_pred --------------------cEeEEEEeeEEcCC-ceEEEeecCCCCCcccEEEEEEEeeEEeCC
Q 043061 246 --------------------SKNVRATDIICGPG-HGISIGSLGAGNSEAFVSNVLVNRARLSGT 289 (299)
Q Consensus 246 --------------------s~ni~I~n~~~~~~-~Gi~igs~~~~~~~~~v~nv~i~n~~~~~~ 289 (299)
.+||+++|+++.+. ..|.++....+.....|+||+|+|++....
T Consensus 279 gV~NV~V~NrIKt~~G~GG~V~NItfeNI~m~nV~~~I~i~q~~~~~s~~~IsnItfkNItgTsa 343 (600)
T 2x6w_A 279 YCRGAYVVMHAAEAAGAGSYAYNMQVENNIAVIYGQFVILGSDVTATVSGHLNDVIVSGNIVSIG 343 (600)
T ss_dssp ESEEEEEEECGGGCTTTCSEEEEEEEESCEEEESSEEEEEEECBCSSCBCEEEEEEEESCEEEEC
T ss_pred cEEEEEEEEEEEeecCCCceEEEEEEEEEEEEccceEEEeCCCCCCCCCceEEEEEEEeEEEEec
Confidence 37888888887654 477776643333456899999999998753
No 54
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.36 E-value=4.7e-06 Score=76.44 Aligned_cols=90 Identities=11% Similarity=0.047 Sum_probs=61.3
Q ss_pred eEEEEccCcEEEEeEEEEcCCC-----ceEEEeceeeEEEEeEEEECCCCC--------CCCCee-eee-ceecEEEEee
Q 043061 167 AVTFYGCKNVRVSSLRFRNSQK-----MHLTFQYCVNVRALNLLVIAPGNS--------PNTDGI-HVT-GTQNILIKNC 231 (299)
Q Consensus 167 ~i~~~~~~nv~I~~v~i~ns~~-----~~i~~~~s~nv~i~~~~I~~~~~~--------~~~DGi-~~~-~s~~v~I~n~ 231 (299)
.|.+..++||.|++|+|+..+. -.|.+..++||.|++|.+....+. ...||. ++. ++.+|+|.+|
T Consensus 104 gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn 183 (353)
T 1air_A 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYN 183 (353)
T ss_dssp EEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESC
T ss_pred eEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEee
Confidence 5788899999999999997653 468899999999999999853211 112554 553 7889999999
Q ss_pred EEEcCCccEEecCCc----EeEEEEeeEE
Q 043061 232 VIRTGDDCISIVSGS----KNVRATDIIC 256 (299)
Q Consensus 232 ~i~~gDD~iai~sgs----~ni~I~n~~~ 256 (299)
.|...+-+.-+++.. .+|++.+|.|
T Consensus 184 ~f~~h~k~~LiG~sd~~~g~~vT~hhN~f 212 (353)
T 1air_A 184 YIHGVKKVGLDGSSSSDTGRNITYHHNYY 212 (353)
T ss_dssp EEEEEEECCEESSSTTCCCCEEEEESCEE
T ss_pred EEcCCCceeEECCCcCCCCceEEEEceEE
Confidence 998543333333310 2455555544
No 55
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.35 E-value=1.8e-06 Score=79.28 Aligned_cols=97 Identities=12% Similarity=0.075 Sum_probs=74.3
Q ss_pred ceEEEeceeeEEEEeEEEECCC-CCCCCCeeeeeceecEEEEeeEEEcC--------------CccEEecCCcEeEEEEe
Q 043061 189 MHLTFQYCVNVRALNLLVIAPG-NSPNTDGIHVTGTQNILIKNCVIRTG--------------DDCISIVSGSKNVRATD 253 (299)
Q Consensus 189 ~~i~~~~s~nv~i~~~~I~~~~-~~~~~DGi~~~~s~~v~I~n~~i~~g--------------DD~iai~sgs~ni~I~n 253 (299)
.++.+..++||.|+|++|.... .....|+|.+.++++|.|++|.|..+ |..+.++.++.+|+|.|
T Consensus 103 ~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISn 182 (353)
T 1air_A 103 FGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSY 182 (353)
T ss_dssp SEEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEES
T ss_pred ceEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEe
Confidence 4677778999999999999642 23468999999999999999999743 55678888899999999
Q ss_pred eEEcCCc-eEEEeecCCCCCcccEEEEEEEeeEEeCC
Q 043061 254 IICGPGH-GISIGSLGAGNSEAFVSNVLVNRARLSGT 289 (299)
Q Consensus 254 ~~~~~~~-Gi~igs~~~~~~~~~v~nv~i~n~~~~~~ 289 (299)
|.|...+ +.-+|+..... -.+|+|.+|.|.++
T Consensus 183 n~f~~h~k~~LiG~sd~~~----g~~vT~hhN~f~~~ 215 (353)
T 1air_A 183 NYIHGVKKVGLDGSSSSDT----GRNITYHHNYYNDV 215 (353)
T ss_dssp CEEEEEEECCEESSSTTCC----CCEEEEESCEEEEE
T ss_pred eEEcCCCceeEECCCcCCC----CceEEEEceEEcCC
Confidence 9998643 44455543221 15888888888763
No 56
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=98.32 E-value=0.00018 Score=63.59 Aligned_cols=179 Identities=16% Similarity=0.272 Sum_probs=119.4
Q ss_pred CCeEEEeecCCCCCCC-cccHHHHHHHHHHHhhcCCccEEEecCCeeEEeeeeeeeCCCccceEEEE--eeEEEEeeccC
Q 043061 46 STKIVNVDDFEAKADG-TDDSKAFMEAWEEACSSENEAVLVVPNNKIYHLKPITFSGPCKSDLTMKI--YGTIKASVRLS 122 (299)
Q Consensus 46 ~~~~~~v~d~Ga~gdg-~Ddt~Aiq~Ai~~a~~~~gg~~v~iP~G~~Y~~~~l~l~~p~~snvtl~~--~g~l~~~~~~~ 122 (299)
.++++.+.+|||.+|- +||+++|.+.|.. -..|++|.| .|...-+.+ +-..|.+ .|+|+......
T Consensus 61 darvls~k~fga~~~~~~d~~~~~~~sl~s------~~~v~i~~g-vf~ss~i~~-----~~c~l~g~g~g~~~~~~~~g 128 (542)
T 2x3h_A 61 DARVLTSKPFGAAGDATTDDTEVIAASLNS------QKAVTISDG-VFSSSGINS-----NYCNLDGRGSGVLSHRSSTG 128 (542)
T ss_dssp HHHBCBSSCTTCCCBSSSCCHHHHHHHHTS------SSCEECCSE-EEEECCEEE-----SCCEEECTTTEEEEECSSSS
T ss_pred hheeeecccccccCCcccCcHHHHHhhhcc------cccEecccc-ccccccccc-----ccccccccCCceeeeecCCC
Confidence 3567889999999999 9999999999852 147999999 988766655 3445554 36777654333
Q ss_pred CCCCCCceeEEEe-----eeecEEEEeceEEeCCCcccccccccCCCceeEEEEccCcEEEEeEEEEcCCCceEEEec--
Q 043061 123 DYSRDPRHWLVFE-----NVNNFRVEGGGTIDGNGKVWWRKSCKVNKSLAVTFYGCKNVRVSSLRFRNSQKMHLTFQY-- 195 (299)
Q Consensus 123 ~~~~~~~~~i~~~-----~~~ni~I~G~G~idG~g~~~w~~~~~~~~~~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~-- 195 (299)
. .+.|. ...+++|.|+ ... ......-+.|....+|+++++.|.|....++.+.-
T Consensus 129 n-------~lvfn~p~~g~ls~~ti~~n------k~~------ds~qg~qvs~~gg~dvsv~~i~fsn~~g~gfsliayp 189 (542)
T 2x3h_A 129 N-------YLVFNNPRTGRLSNITVESN------KAT------DTTQGQQVSLAGGSDVTVSDVNFSNVKGTGFSLIAYP 189 (542)
T ss_dssp C-------CEEEESCEEEEEEEEEEECC------CSS------TTCBCCSEEEESCEEEEEEEEEEEEECSBEEEEEEEC
T ss_pred C-------EEEEeCCCCcceeeEEEecc------cCC------ccccceEEEecCCCcceEeeeeeeecCCCceeEEEcC
Confidence 2 25554 3466777663 110 00001138899999999999999999988876542
Q ss_pred ----eeeEEEEeEEEECCCCCCC--CCeeeeeceecEEEEeeEEEcCC--ccEEecCCcEeEEEEeeE
Q 043061 196 ----CVNVRALNLLVIAPGNSPN--TDGIHVTGTQNILIKNCVIRTGD--DCISIVSGSKNVRATDII 255 (299)
Q Consensus 196 ----s~nv~i~~~~I~~~~~~~~--~DGi~~~~s~~v~I~n~~i~~gD--D~iai~sgs~ni~I~n~~ 255 (299)
-+...|++++=.-.+.+.| +-++-++++.|-+|++..-++.. .++-++...+.-.+.|+.
T Consensus 190 ~~~~p~g~~i~~irg~y~g~a~nk~agcvl~dss~nslid~via~nypqfgavelk~~a~ynivsnvi 257 (542)
T 2x3h_A 190 NDAPPDGLMIKGIRGSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQFGAVELKGTASYNIVSNVI 257 (542)
T ss_dssp SSSCCBSCEEEEEEEEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCTTEEEEEETTCBSCEEEEEE
T ss_pred CCCCCCceEEeccccceeccccccccceEEeccchhhhhhhhhhhcCCccceEEeecceeeehhhhhh
Confidence 2356778877664444333 33444568889999998887754 567777764444444443
No 57
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.16 E-value=2.3e-05 Score=72.05 Aligned_cols=146 Identities=14% Similarity=0.115 Sum_probs=83.7
Q ss_pred EEEe-eeecEEEEeceEEeC-CCcccccccccCCCceeEEEEccCcEEEEeEEEEcCCCceEE--EeceeeEEEEeEEEE
Q 043061 132 LVFE-NVNNFRVEGGGTIDG-NGKVWWRKSCKVNKSLAVTFYGCKNVRVSSLRFRNSQKMHLT--FQYCVNVRALNLLVI 207 (299)
Q Consensus 132 i~~~-~~~ni~I~G~G~idG-~g~~~w~~~~~~~~~~~i~~~~~~nv~I~~v~i~ns~~~~i~--~~~s~nv~i~~~~I~ 207 (299)
|.+. +++||.|++ -.|.. +...-|... +|.+..++||.|+.++|.....-.+. ...+++|+|+++.|.
T Consensus 126 l~i~~~a~NVIIrn-l~i~~~~~~~~~~~D-------aI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~ 197 (359)
T 1qcx_A 126 LRVVSGAKNVIIQN-IAVTDINPKYVWGGD-------AITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLID 197 (359)
T ss_dssp EEEETTCCCEEEES-CEEEEECTTEETSCC-------SEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEE
T ss_pred EEEecCCCCEEEeC-cEEEecCCcccccCc-------eeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEec
Confidence 5555 678888887 33432 221123222 57778888888888888766443332 336788888888887
Q ss_pred CCCC-CCCCCeee-----ee-ceecEEEEeeEEEcCCc-cEEecCCcEeEEEEeeEEcCCceEEEeecCCCCCcccEEEE
Q 043061 208 APGN-SPNTDGIH-----VT-GTQNILIKNCVIRTGDD-CISIVSGSKNVRATDIICGPGHGISIGSLGAGNSEAFVSNV 279 (299)
Q Consensus 208 ~~~~-~~~~DGi~-----~~-~s~~v~I~n~~i~~gDD-~iai~sgs~ni~I~n~~~~~~~Gi~igs~~~~~~~~~v~nv 279 (299)
...+ +...+|.| +. .+.+++++++.+.+... .=.+. +...+.+.||.+.+-.+-+++... -..+
T Consensus 198 ~~~~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~~R~Pr~r-~~~~~hv~NN~~~n~~~~a~~~~~-------~~~i 269 (359)
T 1qcx_A 198 GRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQ-GNTLLHAVNNLFHNFDGHAFEIGT-------GGYV 269 (359)
T ss_dssp CBCSSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEEC-SSEEEEEESCEEEEEEEEEEEECT-------TEEE
T ss_pred CCccccccCcccccceeEEecCCCCeehcccEeccCcccCceec-CCceEEEEccEEECccCeEEecCC-------CceE
Confidence 4321 22233333 32 35688888888864321 11111 134688888887653333333221 2357
Q ss_pred EEEeeEEeCCceeE
Q 043061 280 LVNRARLSGTTNGV 293 (299)
Q Consensus 280 ~i~n~~~~~~~~gi 293 (299)
.+++++|.+..+++
T Consensus 270 ~~e~N~F~~~~~~~ 283 (359)
T 1qcx_A 270 LAEGNVFQDVNVVV 283 (359)
T ss_dssp EEESCEEEEEEEEE
T ss_pred EEEeeEEECCCccc
Confidence 78888887766554
No 58
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=98.14 E-value=2.1e-05 Score=72.65 Aligned_cols=110 Identities=9% Similarity=0.147 Sum_probs=90.1
Q ss_pred CcEEEEeEEEEcC-----C------CceEEEec-eeeEEEEeEEEECCCCCCCCCeeeeeceecEEEEeeEEEcCCccEE
Q 043061 174 KNVRVSSLRFRNS-----Q------KMHLTFQY-CVNVRALNLLVIAPGNSPNTDGIHVTGTQNILIKNCVIRTGDDCIS 241 (299)
Q Consensus 174 ~nv~I~~v~i~ns-----~------~~~i~~~~-s~nv~i~~~~I~~~~~~~~~DGi~~~~s~~v~I~n~~i~~gDD~ia 241 (299)
++|+|++++|++. . ..+|.+.. .+++.|+++.+.. +.-||.+..+++++|++|.|.....||-
T Consensus 136 s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~-----~~fGI~l~~a~~~~I~~N~I~e~GNgI~ 210 (410)
T 2inu_A 136 SGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVY-----LEHALIVRGADALRVNDNMIAECGNCVE 210 (410)
T ss_dssp ECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEES-----CSEEEEETTEESCEEESCEEESSSEEEE
T ss_pred CCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEec-----ccEEEEEccCCCcEEECCEEEecCCcee
Confidence 6777777777766 3 23588875 8999999999997 6789999999999999999997778999
Q ss_pred ecCCcEeEEEEeeEEcCC---ceEEEeecCCCCCcccEEEEEEEeeEE-eCCceeEEEEe
Q 043061 242 IVSGSKNVRATDIICGPG---HGISIGSLGAGNSEAFVSNVLVNRARL-SGTTNGVRIKT 297 (299)
Q Consensus 242 i~sgs~ni~I~n~~~~~~---~Gi~igs~~~~~~~~~v~nv~i~n~~~-~~~~~gi~ik~ 297 (299)
++..++...|+|+.+..+ +||.+ + ...+..|+++.+ ....+||.++.
T Consensus 211 L~G~~~~~~I~~N~i~~~~dG~gIyl--~-------ns~~~~I~~N~i~~~~R~gIh~m~ 261 (410)
T 2inu_A 211 LTGAGQATIVSGNHMGAGPDGVTLLA--E-------NHEGLLVTGNNLFPRGRSLIEFTG 261 (410)
T ss_dssp ECSCEESCEEESCEEECCTTSEEEEE--E-------SEESCEEESCEECSCSSEEEEEES
T ss_pred eccccccceEecceeeecCCCCEEEE--E-------eCCCCEEECCCcccCcceEEEEEc
Confidence 999889999999999753 45766 3 267779999977 56999999864
No 59
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=98.13 E-value=3.9e-05 Score=71.72 Aligned_cols=114 Identities=9% Similarity=0.040 Sum_probs=65.0
Q ss_pred eEEEEccCcEEEEeEEEEcCC-----------------CceEEEe-ceeeEEEEeEEEECCCCCC---CCCeeeee-cee
Q 043061 167 AVTFYGCKNVRVSSLRFRNSQ-----------------KMHLTFQ-YCVNVRALNLLVIAPGNSP---NTDGIHVT-GTQ 224 (299)
Q Consensus 167 ~i~~~~~~nv~I~~v~i~ns~-----------------~~~i~~~-~s~nv~i~~~~I~~~~~~~---~~DGi~~~-~s~ 224 (299)
+|.+..++||-|+.|+|.++. -..+.+. .+++|+|++|.|....... ..|.-..+ +..
T Consensus 191 aI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~ 270 (416)
T 1vbl_A 191 SISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQHDGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHL 270 (416)
T ss_dssp SEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCC
T ss_pred eEEecCCceEEEEccEEecCCCcccccccccCcceeecccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCce
Confidence 688899999999999998652 1124454 5889999999987521100 01100001 123
Q ss_pred cEEEEeeEEEcCC-ccEEecCCcEeEEEEeeEEcC--Cc----eEEEeecCCCCCcccEEEEEEEeeEEeCC
Q 043061 225 NILIKNCVIRTGD-DCISIVSGSKNVRATDIICGP--GH----GISIGSLGAGNSEAFVSNVLVNRARLSGT 289 (299)
Q Consensus 225 ~v~I~n~~i~~gD-D~iai~sgs~ni~I~n~~~~~--~~----Gi~igs~~~~~~~~~v~nv~i~n~~~~~~ 289 (299)
+|++.+|.|.+-. ..=.+..+ .+.+.||.+.+ .. +.+||.... ..|.++++.|...
T Consensus 271 ~VT~hhN~f~~~~~R~Pr~R~G--~~Hv~NN~~~n~~~~~~~~~ya~g~~~~-------~~i~~E~N~F~~~ 333 (416)
T 1vbl_A 271 RVTLHHNYYKNVTQRLPRVRFG--QVHIYNNYYEFSNLADYDFQYAWGVGVF-------SQIYAQNNYFSFD 333 (416)
T ss_dssp CEEEESCEEEEEEECSSEESSC--EEEEESCEEEECTTSSSCCCCSEEEETT-------CEEEEESCEEEES
T ss_pred EEEEECcEecCCccCCcccccc--eEEEEcceEECCCCCcccceeEeccCCC-------cEEEEECCEEECC
Confidence 6899999886421 12223333 48888888852 11 133332211 1467788877753
No 60
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=98.04 E-value=2.8e-05 Score=71.07 Aligned_cols=48 Identities=17% Similarity=0.339 Sum_probs=31.8
Q ss_pred CCcccHHHHHHHHHHHhhcCC-ccEEEecCCeeEEeeeeeeeCCCccceEEEEee
Q 043061 60 DGTDDSKAFMEAWEEACSSEN-EAVLVVPNNKIYHLKPITFSGPCKSDLTMKIYG 113 (299)
Q Consensus 60 dg~Ddt~Aiq~Ai~~a~~~~g-g~~v~iP~G~~Y~~~~l~l~~p~~snvtl~~~g 113 (299)
||.-+-.-||+||+ +++... ..+|+|++| +|. ..|.+. +.+++|.+++
T Consensus 13 ~g~g~f~TIq~Ai~-aap~~~~~~~I~I~~G-~Y~-E~V~I~---k~~Itl~G~g 61 (342)
T 2nsp_A 13 SDGKTFKTIADAIA-SAPAGSTPFVILIKNG-VYN-ERLTIT---RNNLHLKGES 61 (342)
T ss_dssp SSCSCBSSHHHHHH-TSCSSSSCEEEEECSE-EEE-CCEEEC---STTEEEEESC
T ss_pred CCCCCcchHHHHHH-hcccCCCcEEEEEeCC-EEE-EEEEEe---cCeEEEEecC
Confidence 44334445999996 454321 138999999 996 456662 5678988875
No 61
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.03 E-value=4.4e-05 Score=70.16 Aligned_cols=70 Identities=16% Similarity=0.098 Sum_probs=56.5
Q ss_pred ceEEEe-ceeeEEEEeEEEECC--CCCCCCCeeeeeceecEEEEeeEEEc-CCccEEe-cCCcEeEEEEeeEEcC
Q 043061 189 MHLTFQ-YCVNVRALNLLVIAP--GNSPNTDGIHVTGTQNILIKNCVIRT-GDDCISI-VSGSKNVRATDIICGP 258 (299)
Q Consensus 189 ~~i~~~-~s~nv~i~~~~I~~~--~~~~~~DGi~~~~s~~v~I~n~~i~~-gDD~iai-~sgs~ni~I~n~~~~~ 258 (299)
.++.+. .++||.|+|++|+.. ......|+|.+.++++|.|++|.+.. +|..+.. ..++.+|+|.||.|..
T Consensus 124 ~gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~ 198 (359)
T 1idk_A 124 KGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDG 198 (359)
T ss_dssp CCEEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEEC
T ss_pred ceEEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecC
Confidence 346676 789999999999962 22246799999999999999999975 6666665 5578999999999963
No 62
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=98.02 E-value=7.7e-05 Score=68.59 Aligned_cols=47 Identities=15% Similarity=0.318 Sum_probs=29.5
Q ss_pred CcccHHHHHHHHHHHhhcCC-ccEEEecCCeeEEeeeeeeeCCCccceEEEEee
Q 043061 61 GTDDSKAFMEAWEEACSSEN-EAVLVVPNNKIYHLKPITFSGPCKSDLTMKIYG 113 (299)
Q Consensus 61 g~Ddt~Aiq~Ai~~a~~~~g-g~~v~iP~G~~Y~~~~l~l~~p~~snvtl~~~g 113 (299)
|.-+-.-||+||+ +++... ..+|+|++| +|. ..+.+. +.+++|++++
T Consensus 40 g~g~f~TIq~Ai~-aa~~~~~~~~I~I~~G-~Y~-E~v~I~---k~~itl~G~g 87 (364)
T 3uw0_A 40 QGDEFSSINAALK-SAPKDDTPFIIFLKNG-VYT-ERLEVA---RSHVTLKGEN 87 (364)
T ss_dssp ----CCCHHHHHH-HSCSSSSCEEEEECSE-EEC-CCEEEC---STTEEEEESC
T ss_pred CCCCcccHHHHHh-hcccCCCcEEEEEeCC-EEE-EEEEEc---CCeEEEEecC
Confidence 4445566999996 443321 238999999 995 345662 5678888775
No 63
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=97.82 E-value=0.00054 Score=61.96 Aligned_cols=182 Identities=10% Similarity=0.054 Sum_probs=104.4
Q ss_pred HHHHHHHHHH---hhcCCccEEEecCCeeEEee-----eeeeeCC-----CccceEEEEee---EEEEeeccCCCCCCCc
Q 043061 66 KAFMEAWEEA---CSSENEAVLVVPNNKIYHLK-----PITFSGP-----CKSDLTMKIYG---TIKASVRLSDYSRDPR 129 (299)
Q Consensus 66 ~Aiq~Ai~~a---~~~~gg~~v~iP~G~~Y~~~-----~l~l~~p-----~~snvtl~~~g---~l~~~~~~~~~~~~~~ 129 (299)
++|++|+... +...+..+|+ =.| +..+. +|.+..+ ..+++||.+.| +|...
T Consensus 29 ~dL~~Al~~~~~~~~~~~p~iI~-V~G-~I~l~~~~~~~i~v~~~~~~~~~~sn~TI~G~g~~~~i~G~----------- 95 (326)
T 3vmv_A 29 AQIQQLIDNRSRSNNPDEPLTIY-VNG-TITQGNSPQSLIDVKNHRGKAHEIKNISIIGVGTNGEFDGI----------- 95 (326)
T ss_dssp HHHHHHHHHHHHSSCTTSCEEEE-ECS-EEESTTCSSSSEEESCTTCTTSCEEEEEEEECTTCCEEESC-----------
T ss_pred HHHHHHHhhcccccCCCCCEEEE-Eee-EEecCCCCCceEEEecccccccCCCCeEEEecCCCeEEeCc-----------
Confidence 3488888521 1133334554 457 65543 4666200 01788887653 33211
Q ss_pred eeEEEeeeecEEEEeceEEeCCCcccccccccCCCceeEEEEc-cCcEEEEeEEEEcCC------C--c-eEEEe-ceee
Q 043061 130 HWLVFENVNNFRVEGGGTIDGNGKVWWRKSCKVNKSLAVTFYG-CKNVRVSSLRFRNSQ------K--M-HLTFQ-YCVN 198 (299)
Q Consensus 130 ~~i~~~~~~ni~I~G~G~idG~g~~~w~~~~~~~~~~~i~~~~-~~nv~I~~v~i~ns~------~--~-~i~~~-~s~n 198 (299)
-|.+.+++||.|+. -.|.... -|... +|.+.. ++||.|+.|+|..+. . . .+.+. .+++
T Consensus 96 -gl~i~~a~NVIIrN-l~i~~~~--~~~~D-------aI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~ 164 (326)
T 3vmv_A 96 -GIRLSNAHNIIIQN-VSIHHVR--EGEGT-------AIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEY 164 (326)
T ss_dssp -CEEEESEEEEEEES-CEEECCC--STTSC-------SEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEE
T ss_pred -EEEEEecceEEEEC-eEEEcCC--CCCCC-------eEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCce
Confidence 25666788998888 3444321 12221 688886 899999999997542 1 1 25554 4899
Q ss_pred EEEEeEEEECCCCCCCCCeeeeec--------eecEEEEeeEEEcC--CccEEecCCcEeEEEEeeEEcC--CceEEEee
Q 043061 199 VRALNLLVIAPGNSPNTDGIHVTG--------TQNILIKNCVIRTG--DDCISIVSGSKNVRATDIICGP--GHGISIGS 266 (299)
Q Consensus 199 v~i~~~~I~~~~~~~~~DGi~~~~--------s~~v~I~n~~i~~g--DD~iai~sgs~ni~I~n~~~~~--~~Gi~igs 266 (299)
|+|++|.|..... ..+.+ -.+|++.+|.|.+. +-. .+..+ .+.+.||.+.+ .+|+..+
T Consensus 165 VTISnn~f~~h~k------~~LiG~sd~~~~~~~~vT~~~N~f~~~~~R~P-r~r~G--~~Hv~NN~~~n~~~~~~~~~- 234 (326)
T 3vmv_A 165 ITVSWNKFENHWK------TMLVGHTDNASLAPDKITYHHNYFNNLNSRVP-LIRYA--DVHMFNNYFKDINDTAINSR- 234 (326)
T ss_dssp EEEESCEEEEEEE------CEEECSSSCGGGCCEEEEEESCEEEEEEECTT-EEESC--EEEEESCEEEEESSCSEEEE-
T ss_pred EEEEceEEecCce------EEEECCCCCCcccCccEEEEeeEecCCcCcCC-cccCC--cEEEEccEEECCCceEEeec-
Confidence 9999999985211 11111 13799999998641 111 22222 68888888864 4566542
Q ss_pred cCCCCCcccEEEEEEEeeEEeCC
Q 043061 267 LGAGNSEAFVSNVLVNRARLSGT 289 (299)
Q Consensus 267 ~~~~~~~~~v~nv~i~n~~~~~~ 289 (299)
.+ ..|.++++.|.+.
T Consensus 235 ~~--------a~v~~e~N~F~~~ 249 (326)
T 3vmv_A 235 VG--------ARVFVENNYFDNV 249 (326)
T ss_dssp TT--------CEEEEESCEEEEE
T ss_pred CC--------cEEEEEceEEECC
Confidence 21 2456677777665
No 64
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=97.72 E-value=7.8e-05 Score=69.59 Aligned_cols=108 Identities=6% Similarity=-0.065 Sum_probs=79.5
Q ss_pred eEEEEccCcEEEEeEEEEcCCCceEEEeceeeEEEEeEEEECCCCCCCCCeeeeece-ecEEEEeeEEEcCC--------
Q 043061 167 AVTFYGCKNVRVSSLRFRNSQKMHLTFQYCVNVRALNLLVIAPGNSPNTDGIHVTGT-QNILIKNCVIRTGD-------- 237 (299)
Q Consensus 167 ~i~~~~~~nv~I~~v~i~ns~~~~i~~~~s~nv~i~~~~I~~~~~~~~~DGi~~~~s-~~v~I~n~~i~~gD-------- 237 (299)
.|.+ ...+++|++|+|+++...+|.+.. .+.+|++|+|... ...||.+... .+.+|++|++....
T Consensus 109 ~i~i-~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n----~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~ 182 (400)
T 1ru4_A 109 GFYV-TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHN----RNTGLEINNGGSYNTVINSDAYRNYDPKKNGSM 182 (400)
T ss_dssp SEEE-CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESC----SSCSEEECTTCCSCEEESCEEECCCCTTTTTSS
T ss_pred EEEE-ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECC----CceeEEEEcccCCeEEEceEEEcccCccccCcc
Confidence 4655 789999999999998877888876 7889999999972 2349999864 48999999997532
Q ss_pred -ccEEecCC-cEeEEEEeeEEcCC--ceEEEeecCCCCCcccEEEEEEEeeEEeC
Q 043061 238 -DCISIVSG-SKNVRATDIICGPG--HGISIGSLGAGNSEAFVSNVLVNRARLSG 288 (299)
Q Consensus 238 -D~iai~sg-s~ni~I~n~~~~~~--~Gi~igs~~~~~~~~~v~nv~i~n~~~~~ 288 (299)
|+++++.. .++.+|++|+.... .||.+- +. ...|+|+||...+
T Consensus 183 ~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~--~~------~~~v~i~nn~a~~ 229 (400)
T 1ru4_A 183 ADGFGPKQKQGPGNRFVGCRAWENSDDGFDLF--DS------PQKVVIENSWAFR 229 (400)
T ss_dssp CCSEEECTTCCSCCEEESCEEESCSSCSEECT--TC------CSCCEEESCEEES
T ss_pred cceEEEEecccCCeEEECCEEeecCCCcEEEE--ec------CCCEEEEeEEEEC
Confidence 68888753 47888999998642 477662 11 1234666666654
No 65
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=97.54 E-value=0.0018 Score=59.38 Aligned_cols=102 Identities=20% Similarity=0.211 Sum_probs=77.6
Q ss_pred ceEEEeceeeEEEEeEEEECCCC-----------CCCCCeeeeeceecEEEEeeEEEcC------------------Ccc
Q 043061 189 MHLTFQYCVNVRALNLLVIAPGN-----------SPNTDGIHVTGTQNILIKNCVIRTG------------------DDC 239 (299)
Q Consensus 189 ~~i~~~~s~nv~i~~~~I~~~~~-----------~~~~DGi~~~~s~~v~I~n~~i~~g------------------DD~ 239 (299)
.++.+..++||.|+|++|+...+ ....|+|.+.++++|.|++|.|..+ |.+
T Consensus 96 ~gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl 175 (355)
T 1pcl_A 96 GSLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGA 175 (355)
T ss_pred CEEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccc
Confidence 35667789999999999996432 1357999999999999999999864 555
Q ss_pred EEecCCcEeEEEEeeEEcCCc-eEEEeecCCCC-CcccEEEEEEEeeEEeCCc
Q 043061 240 ISIVSGSKNVRATDIICGPGH-GISIGSLGAGN-SEAFVSNVLVNRARLSGTT 290 (299)
Q Consensus 240 iai~sgs~ni~I~n~~~~~~~-Gi~igs~~~~~-~~~~v~nv~i~n~~~~~~~ 290 (299)
+.++.++.+|+|.+|.|.... +.-+|+..... ......+|++.+|.|.++.
T Consensus 176 ~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~ 228 (355)
T 1pcl_A 176 LDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVT 228 (355)
T ss_pred eeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCCc
Confidence 778888999999999998644 66667653321 1122458999999998853
No 66
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=97.42 E-value=0.00064 Score=61.73 Aligned_cols=191 Identities=14% Similarity=0.052 Sum_probs=107.6
Q ss_pred cHHHHHHHHHHHhhcCCccEEEecCCeeEEee----------------eeeeeCCCccceEEEEe-eEEEEeeccCCCCC
Q 043061 64 DSKAFMEAWEEACSSENEAVLVVPNNKIYHLK----------------PITFSGPCKSDLTMKIY-GTIKASVRLSDYSR 126 (299)
Q Consensus 64 dt~Aiq~Ai~~a~~~~gg~~v~iP~G~~Y~~~----------------~l~l~~p~~snvtl~~~-g~l~~~~~~~~~~~ 126 (299)
+.+.|++||+. .+..+..+|+| .| ++.+. +|.+ .+++||.+. +.|.
T Consensus 22 t~~~L~~al~~-~~~~~p~iI~~-~G-~i~~~~~~~~c~~~~~~~~~~~l~v----~sn~TI~G~~a~i~---------- 84 (330)
T 2qy1_A 22 TFEAMQSAIDS-YSGSGGLVLNY-TG-KFDFGTIKDVCAQWKLPAKTVQIKN----KSDVTIKGANGSAA---------- 84 (330)
T ss_dssp SHHHHHHHHHH-SCSSSCEEEEE-CC-BCCGGGCCCGGGSTTSCCCEEEEES----CCSEEEEECTTCBB----------
T ss_pred CHHHHHHHHhc-cCCCCCEEEEE-cc-EEecccccccccccccccceeEEEc----CCCeEEECCCcEEe----------
Confidence 34478899853 32344467777 78 77665 3444 578887433 1111
Q ss_pred CCceeEEEe-eeecEEEEeceEEeCCCcccccccccCCCceeEEEE-----ccCcEEEEeEEEEcCC-----------Cc
Q 043061 127 DPRHWLVFE-NVNNFRVEGGGTIDGNGKVWWRKSCKVNKSLAVTFY-----GCKNVRVSSLRFRNSQ-----------KM 189 (299)
Q Consensus 127 ~~~~~i~~~-~~~ni~I~G~G~idG~g~~~w~~~~~~~~~~~i~~~-----~~~nv~I~~v~i~ns~-----------~~ 189 (299)
..-|.+. +++||.|++ -.|..-... |+.. +|.+. .++||.|+.|+|..+. --
T Consensus 85 --g~gl~i~~~~~NVIIrn-l~i~~~~~~-~~~D-------aI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg 153 (330)
T 2qy1_A 85 --NFGIRVVGNAHNVIIQN-MTIGLLQGG-EDAD-------SISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDG 153 (330)
T ss_dssp --SSEEEEESSCEEEEEES-CEEESCSSG-GGCC-------SEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCC
T ss_pred --eeeEEEeCCCCeEEEeC-eEEeCCCCC-CCCc-------ceeeccccCcccccEEEEeEEEEccccccccCCcceeec
Confidence 1236666 789999998 455432111 2222 57887 5899999999996432 11
Q ss_pred eEEEe-ceeeEEEEeEEEECCCCCC---CCCeeeeeceecEEEEeeEEEcCC-ccEEecCCcEeEEEEeeEEcC--CceE
Q 043061 190 HLTFQ-YCVNVRALNLLVIAPGNSP---NTDGIHVTGTQNILIKNCVIRTGD-DCISIVSGSKNVRATDIICGP--GHGI 262 (299)
Q Consensus 190 ~i~~~-~s~nv~i~~~~I~~~~~~~---~~DGi~~~~s~~v~I~n~~i~~gD-D~iai~sgs~ni~I~n~~~~~--~~Gi 262 (299)
.+.+. .+++|+|+++.|....... ..|.-......+|++.+|.|.+.. ..=.+..+ .+.+.||.+.+ .+|+
T Consensus 154 ~idi~~~s~~VTISnn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f~~~~~R~Pr~r~G--~~hv~NN~~~n~~~~~i 231 (330)
T 2qy1_A 154 GIDMKKGVHHVTVSYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENVESRVPLQRFG--LSHIYNNYFNNVTTSGI 231 (330)
T ss_dssp SEEEESSCEEEEEESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEEEEEEECTTEEESS--EEEEESCEEEEECSCSE
T ss_pred ccccccCcceEEEEcceeccCCeEEEECCCCccccCCCceEEEECcEEcCCCCCCCceecc--eEEEEeeEEEcccceEe
Confidence 24544 5889999999887421100 011100011258899998886421 11123322 47888888864 4565
Q ss_pred EEeecCCCCCcccEEEEEEEeeEEeCCceeE
Q 043061 263 SIGSLGAGNSEAFVSNVLVNRARLSGTTNGV 293 (299)
Q Consensus 263 ~igs~~~~~~~~~v~nv~i~n~~~~~~~~gi 293 (299)
..+. + ..|.+++++|.+..+.+
T Consensus 232 ~~~~-~--------~~i~~e~N~F~~~~~p~ 253 (330)
T 2qy1_A 232 NVRM-G--------GIAKIESNYFENIKNPV 253 (330)
T ss_dssp EEET-T--------CEEEEESCEEEEEESSE
T ss_pred ccCC-C--------cEEEEEccEEECCCCce
Confidence 5421 1 14567777776654443
No 67
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=97.25 E-value=0.00096 Score=61.21 Aligned_cols=190 Identities=13% Similarity=0.159 Sum_probs=109.2
Q ss_pred cHHHHHHHHHHHhhcCCccEEEecCCeeEEee---------------eeeeeCCCccceEEEEee---EEEEeeccCCCC
Q 043061 64 DSKAFMEAWEEACSSENEAVLVVPNNKIYHLK---------------PITFSGPCKSDLTMKIYG---TIKASVRLSDYS 125 (299)
Q Consensus 64 dt~Aiq~Ai~~a~~~~gg~~v~iP~G~~Y~~~---------------~l~l~~p~~snvtl~~~g---~l~~~~~~~~~~ 125 (299)
+.+.|++||. ...+..+|+ =.| ++.+. +|.+ .|+.||.+.| +|..
T Consensus 40 t~~dL~~al~---~~~~p~vI~-V~G-tI~~~~~~~~~s~~~~~~~~~l~v----~snkTI~G~G~~~~i~g-------- 102 (361)
T 1pe9_A 40 NISEFTSALS---AGAEAKIIQ-IKG-TIDISGGTPYTDFADQKARSQINI----PANTTVIGLGTDAKFIN-------- 102 (361)
T ss_dssp SHHHHHHHHT---TTTSCEEEE-ECS-EEETTTTCCCCSHHHHHHHSEEEC----CSSEEEEECTTCCEEES--------
T ss_pred CHHHHHHHHh---cCCCcEEEE-ECC-EEecCCccccccccccccceeEEe----cCCcEEEccCCCeEEec--------
Confidence 3455777772 233334554 467 77653 3555 6899998763 3432
Q ss_pred CCCceeEEE---eeeecEEEEeceEEeCCC---ccc-----ccccccCCCceeEEEEc-cCcEEEEeEEEEcCC------
Q 043061 126 RDPRHWLVF---ENVNNFRVEGGGTIDGNG---KVW-----WRKSCKVNKSLAVTFYG-CKNVRVSSLRFRNSQ------ 187 (299)
Q Consensus 126 ~~~~~~i~~---~~~~ni~I~G~G~idG~g---~~~-----w~~~~~~~~~~~i~~~~-~~nv~I~~v~i~ns~------ 187 (299)
.-|.+ .+++||.|+. -.|..-. ..| |... .. +|.+.. ++||-|+.|+|.++.
T Consensus 103 ----~gl~i~~~~~~~NVIIrN-l~i~~~~d~~p~~~~~~g~~~~----~D-aI~i~~~s~nVWIDHcs~s~~~~~~~~~ 172 (361)
T 1pe9_A 103 ----GSLIIDGTDGTNNVIIRN-VYIQTPIDVEPHYEKGDGWNAE----WD-AMNITNGAHHVWIDHVTISDGNFTDDMY 172 (361)
T ss_dssp ----SEEEEEGGGTCEEEEEES-CEEECCCCSSCEEETTTEEECC----CC-SEEEETTCEEEEEESCEEECTTSCGGGC
T ss_pred ----CEEEEecCCCCceEEEeC-eEEEcCcccccccccccCcccC----Cc-eEEeecCCceEEEEccEeeccccccccc
Confidence 12777 6899999999 4554321 122 2111 11 699999 999999999998762
Q ss_pred -----------CceEEEe-ceeeEEEEeEEEECCCCC---CCCCeee-ee-ceecEEEEeeEEEcCC-ccEEecCCcEeE
Q 043061 188 -----------KMHLTFQ-YCVNVRALNLLVIAPGNS---PNTDGIH-VT-GTQNILIKNCVIRTGD-DCISIVSGSKNV 249 (299)
Q Consensus 188 -----------~~~i~~~-~s~nv~i~~~~I~~~~~~---~~~DGi~-~~-~s~~v~I~n~~i~~gD-D~iai~sgs~ni 249 (299)
-..+.+. .+++|+|++|.|...... ...|.-. .+ +..+|++.+|.|.+-. ..=.+..+ .+
T Consensus 173 ~~~~G~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~R~G--~~ 250 (361)
T 1pe9_A 173 TTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTERAPRVRYG--SI 250 (361)
T ss_dssp CEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEEEECSSEESSC--EE
T ss_pred ccccCcceeeccceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcCccccCcccccc--eE
Confidence 1125564 689999999999852110 0011100 00 1236999999996421 11112222 48
Q ss_pred EEEeeEEcC--Cc-----eEEEeecCCCCCcccEEEEEEEeeEEeCC
Q 043061 250 RATDIICGP--GH-----GISIGSLGAGNSEAFVSNVLVNRARLSGT 289 (299)
Q Consensus 250 ~I~n~~~~~--~~-----Gi~igs~~~~~~~~~v~nv~i~n~~~~~~ 289 (299)
.+.||.+.+ .+ +.++|... + ..|.++++.|...
T Consensus 251 Hv~NN~~~~~~~~~~~~~~ya~g~~~-~------~~i~~E~N~F~~~ 290 (361)
T 1pe9_A 251 HSFNNVFKGDAKDPVYRYQYSFGIGT-S------GSVLSEGNSFTIA 290 (361)
T ss_dssp EEESCEEEEETTCSSSCCCCSEEECT-T------CEEEEESCEEEEE
T ss_pred EEEcceEecccCCCccccceEecCCC-C------cEEEEECCEEECC
Confidence 899998842 11 23333221 1 1467777777764
No 68
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=97.11 E-value=0.0026 Score=60.92 Aligned_cols=62 Identities=16% Similarity=0.154 Sum_probs=24.8
Q ss_pred ccCcEEEEeEEEEcCCCceEEEeceeeEEEEeEEEECCCCCCCCCeeeeeceecEEEEeeEEEc
Q 043061 172 GCKNVRVSSLRFRNSQKMHLTFQYCVNVRALNLLVIAPGNSPNTDGIHVTGTQNILIKNCVIRT 235 (299)
Q Consensus 172 ~~~nv~I~~v~i~ns~~~~i~~~~s~nv~i~~~~I~~~~~~~~~DGi~~~~s~~v~I~n~~i~~ 235 (299)
.+.+.+|++-++.++.+ ++++..+.+.+|++..+........+-||.+.++.+ +|+|++|..
T Consensus 250 kS~~n~i~~N~~~~~~g-gi~l~~~~~s~I~~N~f~gN~~~~~~~Gi~i~~~~~-~I~nN~f~~ 311 (506)
T 1dbg_A 250 KSQENVYYGNTYLNCQG-TMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWGSRH-VIACNYFEL 311 (506)
T ss_dssp ESBSCEEESCEEESCSS-EEEEEECSSCEEESCEEEECSSSSCBCCEEECSBSC-EEESCEEEE
T ss_pred ecCCEEEECCEEEcccC-cEEEeecCccEEECCEEECCcCccCceEEEEECCCC-EEECCEEEC
Confidence 33334444444444432 344444444444444444311000023444444433 555555544
No 69
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=97.00 E-value=0.036 Score=50.28 Aligned_cols=193 Identities=12% Similarity=0.037 Sum_probs=118.6
Q ss_pred HHHHHHHHHhhcCCccEEEecCCeeEEee---eeeeeCCCccceEEEEeeEEEEeeccCCCCCCCceeEEEeeeecEEEE
Q 043061 67 AFMEAWEEACSSENEAVLVVPNNKIYHLK---PITFSGPCKSDLTMKIYGTIKASVRLSDYSRDPRHWLVFENVNNFRVE 143 (299)
Q Consensus 67 Aiq~Ai~~a~~~~gg~~v~iP~G~~Y~~~---~l~l~~p~~snvtl~~~g~l~~~~~~~~~~~~~~~~i~~~~~~ni~I~ 143 (299)
.|++|+. +.+..+|+| +| ++.+. +|.+ .++.||.+.+.-.... .-|.+.+++||.|+
T Consensus 37 dLr~al~----~~~PriIvv-~G-~I~~~~~~~l~v----~snkTI~G~ga~~I~G----------~Gi~I~~a~NVIIr 96 (340)
T 3zsc_A 37 ELEKYTT----AEGKYVIVV-DG-TIVFEPKREIKV----LSDKTIVGINDAKIVG----------GGLVIKDAQNVIIR 96 (340)
T ss_dssp HHHHHHT----SSSCEEEEE-EE-EEEEEEEEEEEE----CSSEEEEEEEEEEEEE----------EEEEEESCEEEEEE
T ss_pred HHHHHHh----CCCCEEEEE-Cc-EEEeCCcceEEe----cCCCEEEeccCcEEec----------CceEEEcCceEEEe
Confidence 3777763 344355655 67 77664 6777 7999998764211111 12666788999998
Q ss_pred eceEEeCCCcc-cccccccCCCceeEEEEccCcEEEEeEEEEcCCCceEEEe-ceeeEEEEeEEEECCCCCC---CCCee
Q 043061 144 GGGTIDGNGKV-WWRKSCKVNKSLAVTFYGCKNVRVSSLRFRNSQKMHLTFQ-YCVNVRALNLLVIAPGNSP---NTDGI 218 (299)
Q Consensus 144 G~G~idG~g~~-~w~~~~~~~~~~~i~~~~~~nv~I~~v~i~ns~~~~i~~~-~s~nv~i~~~~I~~~~~~~---~~DGi 218 (299)
. -.|.+.... -|... ....-+|.+..++||.|+.|+|....--.+.+. .+++|+|++|.|....... ..|+-
T Consensus 97 n-l~i~~~~~~~~~~~~--~~~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~sd~~ 173 (340)
T 3zsc_A 97 N-IHFEGFYMEDDPRGK--KYDFDYINVENSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSSDKE 173 (340)
T ss_dssp S-CEEECCCCTTCTTSC--SSCCCSEEEESCEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSBCCEECCCTTS
T ss_pred C-eEEECCccccCccCC--cCCCCeEEEecCCcEEEEeeeeccCCccceEEecCCceEEEECcEeccCceeeEeCcCCCC
Confidence 8 445442211 12110 011127999999999999999998876668876 5999999999999632211 12211
Q ss_pred ---eeeceecEEEEeeEEEcCC-ccEEecCCcEeEEEEeeEEcC----------CceEEEeecCCCCCcccEEEEEEEee
Q 043061 219 ---HVTGTQNILIKNCVIRTGD-DCISIVSGSKNVRATDIICGP----------GHGISIGSLGAGNSEAFVSNVLVNRA 284 (299)
Q Consensus 219 ---~~~~s~~v~I~n~~i~~gD-D~iai~sgs~ni~I~n~~~~~----------~~Gi~igs~~~~~~~~~v~nv~i~n~ 284 (299)
...+..+|++.+|.|.+.. ..=.+..+ .+.+-||.+.+ -.+-++++... ..|.++++
T Consensus 174 ~~~~d~g~~~vT~hhN~f~~~~~R~Pr~r~G--~~Hv~NN~~~n~~~~~~~~~~~~~yai~~~~~-------a~i~~E~N 244 (340)
T 3zsc_A 174 DPEQAGQAYKVTYHHNYFKNLIQRMPRIRFG--MAHVFNNFYSMGLRTGVSGNVFPIYGVASAMG-------AKVHVEGN 244 (340)
T ss_dssp CHHHHHHSCEEEEESCEEESCCBCTTEEESS--EEEEESCEEECCCCCSCSSCCSCCEEEEEETT-------CEEEEESC
T ss_pred ccccccCCcEEEEECeEecCCCCCCCcccCC--eEEEEccEEECCccccccccceeeeeEecCCC-------CEEEEECc
Confidence 0112247999999996531 11122322 57888988877 22334543322 26788999
Q ss_pred EEeCCce
Q 043061 285 RLSGTTN 291 (299)
Q Consensus 285 ~~~~~~~ 291 (299)
+|.++.+
T Consensus 245 ~F~~~~~ 251 (340)
T 3zsc_A 245 YFMGYGA 251 (340)
T ss_dssp EEECSCH
T ss_pred EEECCCc
Confidence 9988766
No 70
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=96.88 E-value=0.0032 Score=58.56 Aligned_cols=51 Identities=24% Similarity=0.344 Sum_probs=37.3
Q ss_pred eecEEEEeceE-EeCCCcccccccccCCCceeEEEEccCcEEEE-eEEEEcCCCceEEEeceeeEEEEeEEEEC
Q 043061 137 VNNFRVEGGGT-IDGNGKVWWRKSCKVNKSLAVTFYGCKNVRVS-SLRFRNSQKMHLTFQYCVNVRALNLLVIA 208 (299)
Q Consensus 137 ~~ni~I~G~G~-idG~g~~~w~~~~~~~~~~~i~~~~~~nv~I~-~v~i~ns~~~~i~~~~s~nv~i~~~~I~~ 208 (299)
+++|.|++-.. +-.++ .| .+++..|+++++. +|.+. .+|+||.|.||.|..
T Consensus 178 fdnV~Vn~Vt~~v~~Sg--~W----------TIhPi~Cqnvt~r~gL~f~---------eSCrNV~IsnC~FsV 230 (514)
T 2vbk_A 178 FDNVMVNEVETAYLMQG--LW----------HSKFIACQAGTCRVGLHFL---------GQCVSVSVSSCHFSR 230 (514)
T ss_dssp EESCEEEEEEEEEEEES--EE----------EEEEESCEEEEEEEEEEEE---------SCCEEEEEESCEEEC
T ss_pred eeeEEEEeEEEeEeccC--cE----------EEeEeccCceecccCcccc---------CCCCeEEEeccEEec
Confidence 57888887321 11112 24 4899999999988 66664 489999999999997
No 71
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=96.86 E-value=0.0025 Score=59.23 Aligned_cols=146 Identities=9% Similarity=0.065 Sum_probs=78.6
Q ss_pred EEEeeeecEEEEeceEEeCCC---cccccccc-----cCCCceeEEEEccCcEEEEeEEEEcCC----------------
Q 043061 132 LVFENVNNFRVEGGGTIDGNG---KVWWRKSC-----KVNKSLAVTFYGCKNVRVSSLRFRNSQ---------------- 187 (299)
Q Consensus 132 i~~~~~~ni~I~G~G~idG~g---~~~w~~~~-----~~~~~~~i~~~~~~nv~I~~v~i~ns~---------------- 187 (299)
|.+.+ +||.|+. -.|..-. ..|-+... ..+.. +|.+..++||-|+.|+|..+.
T Consensus 145 l~i~~-~NVIIrn-l~i~~~~~~~p~~~p~~~~~~~~~~~~D-aI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~ 221 (399)
T 2o04_A 145 FQIKS-DNVIIRN-IEFQDAYDYFPQWDPTDGSSGNWNSQYD-NITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQH 221 (399)
T ss_dssp EEECS-EEEEEES-CEEECCCCSSCEEETTSSTTCEEECCCC-SEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCC
T ss_pred EEeeC-CCEEEeC-eEEecCccccccccccccccccccCCCC-eEEecCCCcEEEEeeeeecCCCccccccccccceeec
Confidence 66777 8999998 4554321 11100000 00111 688888999999999998652
Q ss_pred -CceEEEe-ceeeEEEEeEEEECCCCCC---CCCeeeee-ceecEEEEeeEEEcCC-ccEEecCCcEeEEEEeeEEcCC-
Q 043061 188 -KMHLTFQ-YCVNVRALNLLVIAPGNSP---NTDGIHVT-GTQNILIKNCVIRTGD-DCISIVSGSKNVRATDIICGPG- 259 (299)
Q Consensus 188 -~~~i~~~-~s~nv~i~~~~I~~~~~~~---~~DGi~~~-~s~~v~I~n~~i~~gD-D~iai~sgs~ni~I~n~~~~~~- 259 (299)
-..+.+. .+++|+|+++.|....... ..|.-..+ +..+|++.+|.|.+-. ..=.+..+ .+.+.||.+.+.
T Consensus 222 ~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~~~R~Pr~R~G--~~Hv~NN~~~n~~ 299 (399)
T 2o04_A 222 HDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQAAPRVRFG--QVHVYNNYYEGST 299 (399)
T ss_dssp CCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEEEECTTEESSC--EEEEESCEEECCT
T ss_pred cccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCCcccCCCcccc--eEEEEcceEECCC
Confidence 1124454 5888999998887521100 01100001 1237888888886421 11123332 488888888531
Q ss_pred c------eEEEeecCCCCCcccEEEEEEEeeEEeCC
Q 043061 260 H------GISIGSLGAGNSEAFVSNVLVNRARLSGT 289 (299)
Q Consensus 260 ~------Gi~igs~~~~~~~~~v~nv~i~n~~~~~~ 289 (299)
+ +.++|... + ..|.++++.|...
T Consensus 300 ~~~~~~~~ya~g~~~-~------~~i~~e~N~F~~~ 328 (399)
T 2o04_A 300 SSSSYPFSYAWGIGK-S------SKIYAQNNVIDVP 328 (399)
T ss_dssp TCSSSCCCCSEEECT-T------CEEEEESCEEECT
T ss_pred CCCccceeeEeccCC-C------cEEEEEceEEECC
Confidence 1 23444321 1 2468888888774
No 72
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=96.85 E-value=0.043 Score=50.97 Aligned_cols=83 Identities=17% Similarity=0.160 Sum_probs=50.6
Q ss_pred eEEEEccCcEEEEeEEEEcCCCc--------eEE-EeceeeEEEEeEEEECCCCCCCCCeeee-----------eceecE
Q 043061 167 AVTFYGCKNVRVSSLRFRNSQKM--------HLT-FQYCVNVRALNLLVIAPGNSPNTDGIHV-----------TGTQNI 226 (299)
Q Consensus 167 ~i~~~~~~nv~I~~v~i~ns~~~--------~i~-~~~s~nv~i~~~~I~~~~~~~~~DGi~~-----------~~s~~v 226 (299)
+.....++++.++||+|+|.... .+- ...+++..+.+|++.... |-+-. +...+.
T Consensus 194 AT~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v~gDr~~fy~C~f~G~Q-----DTLy~~~~~~~~~~~~d~~gRq 268 (422)
T 3grh_A 194 AVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQ-----NTFFVTNSGVQNRLETNRQPRT 268 (422)
T ss_dssp CSEEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEECCSSEEEEEEEEECST-----TCEEECCCCTTCSCCSSCCCEE
T ss_pred EEEEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEEecCCcEEEEeeEEEeec-----ceeeeccccccccccccccccE
Confidence 34555678999999999988432 122 246788999999998743 33332 123456
Q ss_pred EEEeeEEEcCCccEEecCCcEeEEEEeeEEc
Q 043061 227 LIKNCVIRTGDDCISIVSGSKNVRATDIICG 257 (299)
Q Consensus 227 ~I~n~~i~~gDD~iai~sgs~ni~I~n~~~~ 257 (299)
..++|+|...=|-| -|....++++|++.
T Consensus 269 yy~~CyIeGtVDFI---FG~a~AvFe~C~I~ 296 (422)
T 3grh_A 269 LVTNSYIEGDVDIV---SGRGAVVFDNTEFR 296 (422)
T ss_dssp EEESCEEEESEEEE---EESSEEEEESCEEE
T ss_pred EEEecEEeccccEE---ccCceEEEEeeEEE
Confidence 67777776543322 22345667777663
No 73
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=95.03 E-value=0.91 Score=37.30 Aligned_cols=74 Identities=5% Similarity=0.021 Sum_probs=35.0
Q ss_pred cEEEEeEEEEcCCCceEEEeceeeEEEEeEEEECCCCCCCCCeeeeeceecEEEEeeEEEcCCccEEecCCcEeEEEEee
Q 043061 175 NVRVSSLRFRNSQKMHLTFQYCVNVRALNLLVIAPGNSPNTDGIHVTGTQNILIKNCVIRTGDDCISIVSGSKNVRATDI 254 (299)
Q Consensus 175 nv~I~~v~i~ns~~~~i~~~~s~nv~i~~~~I~~~~~~~~~DGi~~~~s~~v~I~n~~i~~gDD~iai~sgs~ni~I~n~ 254 (299)
+.+|+|+.|-....-+||.. -+.+|+|+.... -..|.+.+.++..++|.++-.++.+|=|-=..+...+.|+|.
T Consensus 53 GaTLkNvIIG~~~~dGIHC~--G~ctl~NVwwed----VcEDA~T~kg~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~nF 126 (196)
T 3t9g_A 53 GANLKNVIIGAPGCDGIHCY--GDNVVENVVWED----VGEDALTVKSEGVVEVIGGSAKEAADKVFQLNAPCTFKVKNF 126 (196)
T ss_dssp TCEEEEEEECSCCTTCEEEC--SSEEEEEEEESS----CCSCSEEECSSEEEEEESCEEEEEEEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEEECCCCcCcEEEc--CCEeEEEEEeee----eeceeeEEcCCCeEEEECCCccCCCceEEEECCCceEEEeeE
Confidence 45555555544444445543 234555555544 234455554444455555555544444433444344444443
No 74
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=93.59 E-value=0.38 Score=43.18 Aligned_cols=62 Identities=11% Similarity=0.087 Sum_probs=48.1
Q ss_pred eceeeEEEEeEEEECCCCC--CCCCeeeeeceecEEEEeeEEEcCCccEEecCCcEeEEEEeeEEcC
Q 043061 194 QYCVNVRALNLLVIAPGNS--PNTDGIHVTGTQNILIKNCVIRTGDDCISIVSGSKNVRATDIICGP 258 (299)
Q Consensus 194 ~~s~nv~i~~~~I~~~~~~--~~~DGi~~~~s~~v~I~n~~i~~gDD~iai~sgs~ni~I~n~~~~~ 258 (299)
...++++++|++|.+.... ..+-++.+ .+.++.++||.|...-|.+.+..+ +-.++||.+.+
T Consensus 91 v~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~~~--r~~~~~c~I~G 154 (319)
T 1gq8_A 91 AVGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILAYQDSLYVHSN--RQFFINCFIAG 154 (319)
T ss_dssp ECSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEECSTTCEEECSS--EEEEESCEEEE
T ss_pred EECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECccceeeeecCc--cEEEEecEEEe
Confidence 3578999999999986532 23456666 467899999999998889888774 35999999864
No 75
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=93.41 E-value=0.28 Score=43.96 Aligned_cols=62 Identities=13% Similarity=0.103 Sum_probs=48.0
Q ss_pred eceeeEEEEeEEEECCCCC--CCCCeeeeeceecEEEEeeEEEcCCccEEecCCcEeEEEEeeEEcC
Q 043061 194 QYCVNVRALNLLVIAPGNS--PNTDGIHVTGTQNILIKNCVIRTGDDCISIVSGSKNVRATDIICGP 258 (299)
Q Consensus 194 ~~s~nv~i~~~~I~~~~~~--~~~DGi~~~~s~~v~I~n~~i~~gDD~iai~sgs~ni~I~n~~~~~ 258 (299)
..+++++++|++|.+.... ..+-++.+ .+.++.++||.|...-|.+.+..+. -.++||.+.+
T Consensus 87 v~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~~~r--~~~~~c~I~G 150 (317)
T 1xg2_A 87 AVGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDAYQDTLYAHSQR--QFYRDSYVTG 150 (317)
T ss_dssp ECSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEECSTTCEEECSSE--EEEESCEEEE
T ss_pred EECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCccccceeecCcc--EEEEeeEEEe
Confidence 3688999999999986532 23456666 4678999999999988898887753 4889999864
No 76
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=93.24 E-value=3.2 Score=37.04 Aligned_cols=85 Identities=13% Similarity=0.076 Sum_probs=49.4
Q ss_pred cEEEEeceEEeCCCccccccccc---CCCceeEEEEccCcEEEEeEEEEcCCCceEEEe-ceeeEEEEeEEEECCCCCCC
Q 043061 139 NFRVEGGGTIDGNGKVWWRKSCK---VNKSLAVTFYGCKNVRVSSLRFRNSQKMHLTFQ-YCVNVRALNLLVIAPGNSPN 214 (299)
Q Consensus 139 ni~I~G~G~idG~g~~~w~~~~~---~~~~~~i~~~~~~nv~I~~v~i~ns~~~~i~~~-~s~nv~i~~~~I~~~~~~~~ 214 (299)
.-+|+| +++||.+..| ...|. ...++++.+.. .-+|+|+.|-....-+||.. . +.+|+|+..... .
T Consensus 124 ~~~i~g-~t~Dgg~k~~-~~~c~~q~E~q~~vF~le~--GatlkNvIiG~~~~dGIHC~~G--~CtleNVwwedV----c 193 (344)
T 3b4n_A 124 GATFEN-RTVDCGGVTI-GTSCPNDSDKQKPLIILKN--ATVKNLRISASGGADGIHCDSG--NCTIENVIWEDI----C 193 (344)
T ss_dssp TEEEES-SEEECTTCEE-CCCCCTTCSCCCCSEEEES--CEEEEEEECTTCCTTCEEEEES--EEEEEEEEESSC----S
T ss_pred ceeEec-ceEcCCCcEE-CCCCCCccccCccEEEEcc--CcEEEEEEecCCCccceEEccC--CeeEEEEeehhc----c
Confidence 456776 6889988775 33332 12233555554 47788888766666677665 3 367777777652 3
Q ss_pred CCeeeeeceecEEEEeeEEE
Q 043061 215 TDGIHVTGTQNILIKNCVIR 234 (299)
Q Consensus 215 ~DGi~~~~s~~v~I~n~~i~ 234 (299)
.|.+.+.+ ..++|.+.-.+
T Consensus 194 EDA~T~kg-~~~~I~GGgA~ 212 (344)
T 3b4n_A 194 EDAATNNG-KTMTIVGGIAH 212 (344)
T ss_dssp SCSEEECS-SEEEEESCEEE
T ss_pred cccceecC-ceEEEECchhc
Confidence 45555543 24445444433
No 77
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=93.13 E-value=3.1 Score=34.21 Aligned_cols=74 Identities=5% Similarity=0.059 Sum_probs=37.8
Q ss_pred CcEEEEeEEEEcCCCceEEEeceeeEEEEeEEEECCCCCCCCCeeeeeceecEEEEeeEEEcCCccEEecCCcEeEEEEe
Q 043061 174 KNVRVSSLRFRNSQKMHLTFQYCVNVRALNLLVIAPGNSPNTDGIHVTGTQNILIKNCVIRTGDDCISIVSGSKNVRATD 253 (299)
Q Consensus 174 ~nv~I~~v~i~ns~~~~i~~~~s~nv~i~~~~I~~~~~~~~~DGi~~~~s~~v~I~n~~i~~gDD~iai~sgs~ni~I~n 253 (299)
.+.+|+|+.|-.+..-+||... +.+|+|+..... ..|.+.+.++..++|.+.-.++.+|=|-=..+...+.|+|
T Consensus 48 ~GaTLkNvIIG~~~~dGIHC~G--~CtleNVwwedV----cEDA~T~k~~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~n 121 (197)
T 1ee6_A 48 AGASLKNVVIGAPAADGVHCYG--DCTITNVIWEDV----GEDALTLKSSGTVNISGGAAYKAYDKVFQINAAGTINIRN 121 (197)
T ss_dssp TTEEEEEEEECSSCTTCEEEES--CEEEEEEEESSC----CSCSEEEEESEEEEEESCEEEEEEEEEEEECSSEEEEEES
T ss_pred CCCEEEEEEEcCCCcccEEEcC--ceeEEEEEeeec----cccccEEcCCCeEEEECCCccCCCccEEEecCCceEEEee
Confidence 3566666666555555555543 355666655542 4455555544455555555554444444444444444444
No 78
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=89.93 E-value=2.1 Score=38.59 Aligned_cols=108 Identities=14% Similarity=0.165 Sum_probs=74.2
Q ss_pred EEEccCcEEEEeEEEEcCCC------------------ceEEE---eceeeEEEEeEEEECCCCCCCCCeeeeeceecEE
Q 043061 169 TFYGCKNVRVSSLRFRNSQK------------------MHLTF---QYCVNVRALNLLVIAPGNSPNTDGIHVTGTQNIL 227 (299)
Q Consensus 169 ~~~~~~nv~I~~v~i~ns~~------------------~~i~~---~~s~nv~i~~~~I~~~~~~~~~DGi~~~~s~~v~ 227 (299)
....+++++++||+|+|+.. ..+-+ ..++++.+.+|+|.. .-|++..... +..
T Consensus 91 v~v~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G-----~QDTLy~~~g-r~~ 164 (342)
T 2nsp_A 91 ITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVG-----YQATLYVSGG-RSF 164 (342)
T ss_dssp EEECSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEEC-----STTCEEECSS-EEE
T ss_pred EEEECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEec-----ccceEEECCC-CEE
Confidence 33468999999999999751 12222 568999999999997 5677777654 688
Q ss_pred EEeeEEEcCCccEEecCCcEeEEEEeeEEcC------Cc----e-EEEeecCCCCCcccEEEEEEEeeEEeCC
Q 043061 228 IKNCVIRTGDDCISIVSGSKNVRATDIICGP------GH----G-ISIGSLGAGNSEAFVSNVLVNRARLSGT 289 (299)
Q Consensus 228 I~n~~i~~gDD~iai~sgs~ni~I~n~~~~~------~~----G-i~igs~~~~~~~~~v~nv~i~n~~~~~~ 289 (299)
+++|+|+..=|-| . |.....++||++.. ++ | |.--+. ....-....|.||++.+.
T Consensus 165 ~~~c~I~G~vDFI-F--G~a~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~~----~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 165 FSDCRISGTVDFI-F--GDGTALFNNCDLVSRYRADVKSGNVSGYLTAPST----NINQKYGLVITNSRVIRE 230 (342)
T ss_dssp EESCEEEESEEEE-E--ESSEEEEESCEEEECCCTTSCTTSCCEEEEEECC----BTTCSCCEEEESCEEEES
T ss_pred EEcCEEEeceEEE-e--CCceEEEecCEEEEecCcccccccCceEEEccCC----CCCCCCEEEEEcCEEecC
Confidence 9999998654533 2 33469999998841 11 3 322221 123345689999999875
No 79
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=89.05 E-value=3.5 Score=33.81 Aligned_cols=53 Identities=26% Similarity=0.422 Sum_probs=40.8
Q ss_pred eeEEEEeEEEECCCCCCCCCeeeeeceecEEEEeeEEE-cCCccEEecCCcEeEEEEeeEE
Q 043061 197 VNVRALNLLVIAPGNSPNTDGIHVTGTQNILIKNCVIR-TGDDCISIVSGSKNVRATDIIC 256 (299)
Q Consensus 197 ~nv~i~~~~I~~~~~~~~~DGi~~~~s~~v~I~n~~i~-~gDD~iai~sgs~ni~I~n~~~ 256 (299)
+..+++|+.|-. +..||||..+ ..+++|..++ .++|++.++. +..++|.+.-.
T Consensus 52 ~GaTLkNvIIG~----~~~dGIHC~G--~ctl~NVwwedVcEDA~T~kg-~g~~~I~GGgA 105 (196)
T 3t9g_A 52 KGANLKNVIIGA----PGCDGIHCYG--DNVVENVVWEDVGEDALTVKS-EGVVEVIGGSA 105 (196)
T ss_dssp TTCEEEEEEECS----CCTTCEEECS--SEEEEEEEESSCCSCSEEECS-SEEEEEESCEE
T ss_pred CCCEEEEEEECC----CCcCcEEEcC--CEeEEEEEeeeeeceeeEEcC-CCeEEEECCCc
Confidence 467899998875 4689999975 5889999986 4899999995 45666666543
No 80
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=88.29 E-value=0.19 Score=46.48 Aligned_cols=38 Identities=32% Similarity=0.381 Sum_probs=27.2
Q ss_pred CCCCCCC-cccHHHHHHHHHHHhhcCCccEEEecCCeeEEeee
Q 043061 55 FEAKADG-TDDSKAFMEAWEEACSSENEAVLVVPNNKIYHLKP 96 (299)
Q Consensus 55 ~Ga~gdg-~Ddt~Aiq~Ai~~a~~~~gg~~v~iP~G~~Y~~~~ 96 (299)
=||+||| +|||+|+.+||. +. ..| .++=-.|+||.+..
T Consensus 4 ~~a~gdgvtddt~a~~~~l~-~~-~~~--~~IDG~G~T~kVs~ 42 (670)
T 3ju4_A 4 GSAKGDGVTDDTAALTSALN-DT-PVG--QKINGNGKTYKVTS 42 (670)
T ss_dssp CCCCCEEEEECHHHHHHHHH-HS-CTT--SCEECTTCEEECSS
T ss_pred CcccCCCccCcHHHHHHHhc-cC-CCC--eEEeCCCceEEeee
Confidence 4899999 999999999995 33 222 44555566776644
No 81
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=83.95 E-value=7.9 Score=35.14 Aligned_cols=110 Identities=16% Similarity=0.116 Sum_probs=77.2
Q ss_pred EEEEccCcEEEEeEEEEcCCC------------------c--eEEEe-ceeeEEEEeEEEECCCCCCCCCeeeeeceecE
Q 043061 168 VTFYGCKNVRVSSLRFRNSQK------------------M--HLTFQ-YCVNVRALNLLVIAPGNSPNTDGIHVTGTQNI 226 (299)
Q Consensus 168 i~~~~~~nv~I~~v~i~ns~~------------------~--~i~~~-~s~nv~i~~~~I~~~~~~~~~DGi~~~~s~~v 226 (299)
.....+++++++||+|+|+.. . .+.+. ..++..+.+|++.. .-|.+......+.
T Consensus 116 Tv~V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G-----~QDTLy~~~~gr~ 190 (364)
T 3uw0_A 116 TVLVNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEG-----YQDTLYSKTGSRS 190 (364)
T ss_dssp SEEECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEEC-----SBSCEEECTTCEE
T ss_pred EEEEECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEe-----cccceEeCCCCCE
Confidence 444578999999999999852 1 24444 58999999999997 5688877745689
Q ss_pred EEEeeEEEcCCccEEecCCcEeEEEEeeEEcC-------C-ce-EEEeecCCCCCcccEEEEEEEeeEEeCC
Q 043061 227 LIKNCVIRTGDDCISIVSGSKNVRATDIICGP-------G-HG-ISIGSLGAGNSEAFVSNVLVNRARLSGT 289 (299)
Q Consensus 227 ~I~n~~i~~gDD~iai~sgs~ni~I~n~~~~~-------~-~G-i~igs~~~~~~~~~v~nv~i~n~~~~~~ 289 (299)
.+++|+|+..-|-| -|....+++||++.. . .| |.--+. ....-....|.||++...
T Consensus 191 yf~~c~I~GtvDFI---FG~a~a~f~~c~i~~~~~~~~~~~~g~ITA~~~----~~~~~~G~vf~~c~i~~~ 255 (364)
T 3uw0_A 191 YFSDCEISGHVDFI---FGSGITVFDNCNIVARDRSDIEPPYGYITAPST----LTTSPYGLIFINSRLTKE 255 (364)
T ss_dssp EEESCEEEESEEEE---EESSEEEEESCEEEECCCSSCSSCCEEEEEECC----CTTCSCCEEEESCEEEEC
T ss_pred EEEcCEEEcCCCEE---CCcceEEEEeeEEEEeccCcccCCccEEEeCCc----CCCCCcEEEEEeeEEecC
Confidence 99999999655543 234578999998842 1 23 333221 112235689999999864
No 82
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=83.11 E-value=2.7 Score=34.54 Aligned_cols=85 Identities=26% Similarity=0.417 Sum_probs=55.9
Q ss_pred eeEEEEeEEEECCCCCCCCCeeeeeceecEEEEeeEEE-cCCccEEecCCcEeEEEEeeEEc---------CCce-EEE-
Q 043061 197 VNVRALNLLVIAPGNSPNTDGIHVTGTQNILIKNCVIR-TGDDCISIVSGSKNVRATDIICG---------PGHG-ISI- 264 (299)
Q Consensus 197 ~nv~i~~~~I~~~~~~~~~DGi~~~~s~~v~I~n~~i~-~gDD~iai~sgs~ni~I~n~~~~---------~~~G-i~i- 264 (299)
+..+++|+.|-. +..||||..+ ..+|+|..++ .+.|++.++. +..++|.+.-.. ++.| +.|
T Consensus 48 ~GaTLkNvIIG~----~~~dGIHC~G--~CtleNVwwedVcEDA~T~k~-~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~ 120 (197)
T 1ee6_A 48 AGASLKNVVIGA----PAADGVHCYG--DCTITNVIWEDVGEDALTLKS-SGTVNISGGAAYKAYDKVFQINAAGTINIR 120 (197)
T ss_dssp TTEEEEEEEECS----SCTTCEEEES--CEEEEEEEESSCCSCSEEEEE-SEEEEEESCEEEEEEEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEEcC----CCcccEEEcC--ceeEEEEEeeeccccccEEcC-CCeEEEECCCccCCCccEEEecCCceEEEe
Confidence 468899999976 4799999986 4899999997 4899999995 445555544321 2322 222
Q ss_pred -------eecC--CCCCcccEEEEEEEeeEEeCC
Q 043061 265 -------GSLG--AGNSEAFVSNVLVNRARLSGT 289 (299)
Q Consensus 265 -------gs~~--~~~~~~~v~nv~i~n~~~~~~ 289 (299)
|.+- .|+- ..-++|.|+|+++.+.
T Consensus 121 nF~~~~~GKl~RScGnc-~~~r~v~i~~v~~~~~ 153 (197)
T 1ee6_A 121 NFRADDIGKLVRQNGGT-TYKVVMNVENCNISRV 153 (197)
T ss_dssp SCEEEEEEEEEEECTTC-CSCEEEEEESCEEEEE
T ss_pred eEEEccCCEEEEcCCCC-ccceEEEEeceEEECc
Confidence 2221 1221 2237888888888874
No 83
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=68.64 E-value=26 Score=32.32 Aligned_cols=65 Identities=9% Similarity=0.053 Sum_probs=46.3
Q ss_pred EeceeeEEEEeEEEECCCCC----C--CCCeeeeeceecEEEEeeEEEcCCccEEecC----------CcEeEEEEeeEE
Q 043061 193 FQYCVNVRALNLLVIAPGNS----P--NTDGIHVTGTQNILIKNCVIRTGDDCISIVS----------GSKNVRATDIIC 256 (299)
Q Consensus 193 ~~~s~nv~i~~~~I~~~~~~----~--~~DGi~~~~s~~v~I~n~~i~~gDD~iai~s----------gs~ni~I~n~~~ 256 (299)
....+++.++|++|.+.... . .+-.+.+ .+.+..+.+|.|...-|-+.+.. ....-.+++|.+
T Consensus 197 ~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v-~gDr~~fy~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~CyI 275 (422)
T 3grh_A 197 WSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRT-DGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYI 275 (422)
T ss_dssp EECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEE-CCSSEEEEEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESCEE
T ss_pred EEECCCEEEEeeEEEeCCCCCCCCCCCceEEEEe-cCCcEEEEeeEEEeecceeeeccccccccccccccccEEEEecEE
Confidence 34467889999999875431 1 2233333 45789999999999889888753 346788999987
Q ss_pred cC
Q 043061 257 GP 258 (299)
Q Consensus 257 ~~ 258 (299)
.+
T Consensus 276 eG 277 (422)
T 3grh_A 276 EG 277 (422)
T ss_dssp EE
T ss_pred ec
Confidence 64
No 84
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=63.05 E-value=19 Score=32.16 Aligned_cols=114 Identities=10% Similarity=0.089 Sum_probs=60.6
Q ss_pred eEEEEccCcEEEEeEEEEcCCCceEEEeceeeEEEEeEEEECCCCC-CC-CCee-eeeceecEEEEe-eEE---------
Q 043061 167 AVTFYGCKNVRVSSLRFRNSQKMHLTFQYCVNVRALNLLVIAPGNS-PN-TDGI-HVTGTQNILIKN-CVI--------- 233 (299)
Q Consensus 167 ~i~~~~~~nv~I~~v~i~ns~~~~i~~~~s~nv~i~~~~I~~~~~~-~~-~DGi-~~~~s~~v~I~n-~~i--------- 233 (299)
.|+... -+.+|+||+.++-....+.+.. ..++|.+--..+...+ .. .|=+ ..-+.-.+.|.+ ..+
T Consensus 174 GIHC~~-G~CtleNVwwedVcEDA~T~kg-~~~~I~GGgA~~a~~g~~g~~DKV~Q~Ng~gtv~I~~~~F~~~~~~GKl~ 251 (344)
T 3b4n_A 174 GIHCDS-GNCTIENVIWEDICEDAATNNG-KTMTIVGGIAHNAKDGYGGKPDKVLQHNSKNSTTVVKGNFTLTGEHGKLW 251 (344)
T ss_dssp CEEEEE-SEEEEEEEEESSCSSCSEEECS-SEEEEESCEEEECTTCTTSSCCEEEEECCSSEEEEEETTEEEEEEEEEEE
T ss_pred ceEEcc-CCeeEEEEeehhcccccceecC-ceEEEECchhccccccccCCCCcEEEeCCCccEEEecCceEEEccCCeEe
Confidence 466651 2699999999998888887774 3555555544432100 01 1322 222333566654 221
Q ss_pred EcCCccEEecCCcEeEEEEeeEEcCCceEEEeecCCCCCcccEEEEEEEe
Q 043061 234 RTGDDCISIVSGSKNVRATDIICGPGHGISIGSLGAGNSEAFVSNVLVNR 283 (299)
Q Consensus 234 ~~gDD~iai~sgs~ni~I~n~~~~~~~Gi~igs~~~~~~~~~v~nv~i~n 283 (299)
+..-+|-.- .+.++++|+|+++.+..+--+|=-..+++.+.++|+.+.+
T Consensus 252 RSCGnC~~~-~~~R~v~i~nv~~~g~~~~lvGiN~NyGDtati~n~~i~~ 300 (344)
T 3b4n_A 252 RSCGDCSNN-GGPRFLTVTSATVNGTIDSIAGVNRNYGDVATISGLKIKN 300 (344)
T ss_dssp EECSSCTTC-CCCEEEEESSEEEEEEEEEEEEEEGGGTCEEEECSEEETT
T ss_pred EccCCcccC-CcceEEEEeceEEeCCceEEEEEeCCCCCEEEEEEEEEec
Confidence 221122100 1358899999887432222233344567778888887764
No 85
>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A
Probab=49.84 E-value=93 Score=27.90 Aligned_cols=11 Identities=18% Similarity=0.549 Sum_probs=5.7
Q ss_pred EEEEccCcEEE
Q 043061 168 VTFYGCKNVRV 178 (299)
Q Consensus 168 i~~~~~~nv~I 178 (299)
+.+.+|+|.+|
T Consensus 64 v~I~nc~~c~I 74 (352)
T 3bh7_B 64 FLIQDCENCNI 74 (352)
T ss_dssp EEEESCBSCEE
T ss_pred EEEecCcCCEE
Confidence 45555555544
No 86
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=40.22 E-value=18 Score=33.16 Aligned_cols=23 Identities=26% Similarity=0.167 Sum_probs=14.1
Q ss_pred ceeeEEEEeEEEECCCCCCCCCeeeee
Q 043061 195 YCVNVRALNLLVIAPGNSPNTDGIHVT 221 (299)
Q Consensus 195 ~s~nv~i~~~~I~~~~~~~~~DGi~~~ 221 (299)
+|-|+.++++....+ --|||++.
T Consensus 261 RnYnLqF~d~~~i~~----~~DG~Dl~ 283 (543)
T 3riq_A 261 RNYRLVFDNITTIQC----YYDGIDVN 283 (543)
T ss_dssp CCBSCEEEEEEEESC----SSCSCEEC
T ss_pred ceeeEEEeccceEEE----eecceecc
Confidence 455677777766653 34666654
No 87
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=36.82 E-value=29 Score=31.32 Aligned_cols=35 Identities=26% Similarity=0.422 Sum_probs=19.6
Q ss_pred EeEEEEeeEEcCCceEEEeecCCCCCcccEEEEEEEee
Q 043061 247 KNVRATDIICGPGHGISIGSLGAGNSEAFVSNVLVNRA 284 (299)
Q Consensus 247 ~ni~I~n~~~~~~~Gi~igs~~~~~~~~~v~nv~i~n~ 284 (299)
.|=.|.|....++-|+.+|-.|+++ .|+||+++||
T Consensus 317 ~NHliDnllv~gsLGVG~GMDG~G~---YVSNitv~DC 351 (559)
T 2vfm_A 317 LNHLIDNLLVRGALGVGFGMDGKGM---YVSNITVEDC 351 (559)
T ss_dssp CCCEEEEEEEECCSSEEEEEEEESC---EEEEEEEESC
T ss_pred chhhhhhheeecccceeeeecCCCc---eEeeeEehhc
Confidence 3555666666666555555555443 4666665555
No 88
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=36.33 E-value=29 Score=31.29 Aligned_cols=35 Identities=31% Similarity=0.508 Sum_probs=21.6
Q ss_pred EeEEEEeeEEcCCceEEEeecCCCCCcccEEEEEEEee
Q 043061 247 KNVRATDIICGPGHGISIGSLGAGNSEAFVSNVLVNRA 284 (299)
Q Consensus 247 ~ni~I~n~~~~~~~Gi~igs~~~~~~~~~v~nv~i~n~ 284 (299)
.|=.|.|....++-|+.+|-.|+++ .|+||+++||
T Consensus 320 ~NHliDnllv~gsLGVG~GMDG~G~---YVSNitv~DC 354 (559)
T 2v5i_A 320 NNHLVDNILVMNSLGVGLGMDGSGG---YVSNVTVQDC 354 (559)
T ss_dssp CCCEEEEEEEESCSSEEEEEEEESC---EEEEEEEESC
T ss_pred chhhhhhheeecccceeeeecCCCc---eEeeeEehhc
Confidence 4556666666666666666555543 5666666665
No 89
>2yuh_A Tubulin-specific chaperone C; microtubule, beta-tubulin folding, beta-roll, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.75 E-value=31 Score=27.75 Aligned_cols=11 Identities=18% Similarity=0.431 Sum_probs=6.3
Q ss_pred EEEEccCcEEE
Q 043061 168 VTFYGCKNVRV 178 (299)
Q Consensus 168 i~~~~~~nv~I 178 (299)
+.+.+|+|++|
T Consensus 71 v~i~~C~~~~i 81 (179)
T 2yuh_A 71 VFLEDCSDCVL 81 (179)
T ss_dssp EEEESCBSCEE
T ss_pred EEEEeCCceEE
Confidence 55556655554
No 90
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=29.53 E-value=42 Score=31.48 Aligned_cols=35 Identities=26% Similarity=0.422 Sum_probs=25.1
Q ss_pred EeEEEEeeEEcCCceEEEeecCCCCCcccEEEEEEEee
Q 043061 247 KNVRATDIICGPGHGISIGSLGAGNSEAFVSNVLVNRA 284 (299)
Q Consensus 247 ~ni~I~n~~~~~~~Gi~igs~~~~~~~~~v~nv~i~n~ 284 (299)
.|=.|.|....++-|+.+|-.|+|+ .|+||+++||
T Consensus 424 ~nhlidn~~v~~slgvg~gmdg~g~---yvsnitv~dc 458 (666)
T 2xc1_A 424 LNHLIDNLLVRGALGVGFGMDGKGM---YVSNITVEDC 458 (666)
T ss_dssp CCCEEEEEEEESCSSEEEEEEEESC---EEEEEEEESC
T ss_pred chhhhhhheeecccceeeeecCCCc---eEeeeEehhc
Confidence 4667888777777777777666654 5777777776
No 91
>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A
Probab=27.62 E-value=1.2e+02 Score=27.15 Aligned_cols=11 Identities=27% Similarity=0.785 Sum_probs=6.4
Q ss_pred EEEEccCcEEE
Q 043061 168 VTFYGCKNVRV 178 (299)
Q Consensus 168 i~~~~~~nv~I 178 (299)
+++.+|+|++|
T Consensus 102 v~I~~C~n~~i 112 (352)
T 3bh7_B 102 VFFRNCRDCKC 112 (352)
T ss_dssp EEEESCEEEEE
T ss_pred EEEEcCCCcEE
Confidence 55566666554
Done!