BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043063
(301 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1KYW|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|F Chain F, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYZ|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|E Chain E, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
Length = 365
Score = 197 bits (500), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 159/287 (55%), Gaps = 22/287 (7%)
Query: 30 LPSGGGDAE-NLQRILRLLTNYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGQSYA 84
LP+ DA L R+LRLL Y + + ++ +R Y L + K LV + +G S +
Sbjct: 66 LPTTNPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSIS 125
Query: 85 PYVLQHHQDALMSAWPLVHEAILDPTIEPFVKVHGEPTYSYYGKMPEMNGLMRKAMSGVS 144
L + LM +W + +A+LD I PF K +G + Y+G P N + K MS S
Sbjct: 126 ALNLMNQDKVLMESWYHLKDAVLDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHS 184
Query: 145 VPFMTSILDGYDGFKGVKRLVDVGGSAG---------------INFDLPEVVAEAPSIPG 189
M IL+ Y GF+G+K LVDVGG G INFDLP V+ +APS PG
Sbjct: 185 TITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPG 244
Query: 190 VTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKAIPAGGKLIACEPVLPDDS 249
V H+GGDMF SIP ADA+FMKW+ W+D+ C ++NCY+A+P GK+I E +LP
Sbjct: 245 VEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAP 304
Query: 250 NESQRTRALLEGDIFVMTIYRAKGKHMTEQEFKQLGFSAGFPHLRLY 296
+ S T+ ++ D+ +M + GK T++EF+ L AGF +++
Sbjct: 305 DSSLATKGVVHIDV-IMLAHNPGGKERTQKEFEDLAKGAGFQGFKVH 350
>pdb|3REO|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3REO|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3REO|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3REO|D Chain D, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|D Chain D, Monolignol O-Methyltransferase (Momt)
Length = 368
Score = 188 bits (478), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/281 (37%), Positives = 154/281 (54%), Gaps = 24/281 (8%)
Query: 40 LQRILRLLTNYGVFS-EHREFGG---ERKYSLTEIGKSLVTDAEGQSYAPYVLQHHQDAL 95
L R+LRLL +Y V + RE ER Y L + K L + +G S AP++L L
Sbjct: 80 LDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLLATDKVL 139
Query: 96 MSAWPLVHEAILDPTIEPFVKVHGEPTYSYYGKMPEMNGLMRKAMSGVSVPFMTSILDGY 155
+ W + +AIL+ I PF K +G + Y+G +N + K MS S M IL+ Y
Sbjct: 140 LEPWFYLKDAILEGGI-PFNKAYGMNIFDYHGTDHRINKVFNKGMSSNSTITMKKILEMY 198
Query: 156 DGFKGVKRLVDVGGSAG---------------INFDLPEVVAEAPSIPGVTHIGGDMFKS 200
+GF+G+ +VDVGG G INFDLP V+ +AP+ GV H+GGDMF
Sbjct: 199 NGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFDG 258
Query: 201 IPAADAIFMKWVLTTWTDDECKLIMENCYKAIPAGGKLIACEPVLPDDSNESQRTRALLE 260
+P DAIF+KW+ W+D+ C +++NCY A+P GK+I E +LP + S T+ ++
Sbjct: 259 VPKGDAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIH 318
Query: 261 GDIFVMTIYRAKGKHMTEQEFKQLGFSAGFPHLRLYRVLDC 301
D +M Y GK TE+EF+ L ++GF R ++V C
Sbjct: 319 TDA-LMLAYNPGGKERTEKEFQALAMASGF---RGFKVASC 355
>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To
Sah
pdb|3P9I|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9K|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
Length = 364
Score = 185 bits (469), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 157/291 (53%), Gaps = 22/291 (7%)
Query: 20 LSASQILTRILPSGGGDAENL-QRILRLLTNYGVFSEHREFGGE----RKYSLTEIGKSL 74
L+ +++ ++ + +A ++ RILRLL +Y V + E G + R Y + K L
Sbjct: 57 LTPTEVAAKLPSAANPEAPDMVDRILRLLASYNVVTCLVEEGKDGRLSRSYGAAPVCKFL 116
Query: 75 VTDAEGQSYAPYVLQHHQDALMSAWPLVHEAILDPTIEPFVKVHGEPTYSYYGKMPEMNG 134
+ +G S A L + LM +W + +A+LD I PF K +G + Y+G P N
Sbjct: 117 TPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGI-PFNKAYGMSAFEYHGTDPRFNR 175
Query: 135 LMRKAMSGVSVPFMTSILDGYDGFKGVKRLVDVGGSAG---------------INFDLPE 179
+ + M S+ +L+ Y GF+G+ LVDVGG G +NFDLP
Sbjct: 176 VFNEGMKNHSIIITKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPH 235
Query: 180 VVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKAIPAGGKLI 239
V++EAP PGVTH+GGDMFK +P+ D I MKW+L W+D C +++NCY A+PA GK++
Sbjct: 236 VISEAPQFPGVTHVGGDMFKEVPSGDTILMKWILHDWSDQHCATLLKNCYDALPAHGKVV 295
Query: 240 ACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHMTEQEFKQLGFSAGF 290
+ +LP + + ++ + D+ +M + G+ E+EF+ L AGF
Sbjct: 296 LVQCILPVNPEANPSSQGVFHVDM-IMLAHNPGGRERYEREFQALARGAGF 345
>pdb|1FP1|D Chain D, Crystal Structure Analysis Of Chalcone O-Methyltransferase
Length = 372
Score = 175 bits (444), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 162/300 (54%), Gaps = 29/300 (9%)
Query: 20 LSASQILTRILPSGGGDAE---NLQRILRLLTNYGVFSEH----REFGGERKYSLTEIGK 72
+S S+I ++ LP+ ++ L R+LRLL +Y V + + G ER Y L+ +GK
Sbjct: 63 MSPSEIASK-LPASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGK 121
Query: 73 SLVTDAEGQSYAPYVLQHHQDALMSAWPLVHEAILDPTIEPFVKVHGEPTYSYYGKMPEM 132
LV D A + AL+ W EA++D I+ F VHG Y + GK +M
Sbjct: 122 YLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKM 181
Query: 133 NGLMRKAMSGVSVPFMTSILDGYDGFKGVKRLVDVGGSAG---------------INFDL 177
N + K+M V M +L+ Y GF+G+ LVDVGG +G INFDL
Sbjct: 182 NQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL 241
Query: 178 PEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKAIPAGGK 237
P+V+ AP + G+ H+GGDMF S+P DA+ +K V W+D++C + NC+KA+ GK
Sbjct: 242 PQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGK 301
Query: 238 LIACEPVLPDDSNESQRTR--ALLEGDIFVMTIYRAKGKHMTEQEFKQLGFSAGFPHLRL 295
+I E +LP++ N S+ ++ + L+ +F+ G+ TE+++++L +GF ++
Sbjct: 302 VIIVEFILPEEPNTSEESKLVSTLDNLMFI----TVGGRERTEKQYEKLSKLSGFSKFQV 357
>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Chalcone O- Methyltransferase
Length = 372
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 129/251 (51%), Gaps = 17/251 (6%)
Query: 60 GGERKYSLTEIGKSLVTDAEGQSYAPYVLQHHQDALMSAWPLVHEAILDPTIEPFVKVHG 119
G ER Y L+ +GK LV D A + AL+ W EA++D I+ F VHG
Sbjct: 109 GAERVYGLSXVGKYLVPDESRGYLASFTTFLCYPALLQVWXNFKEAVVDEDIDLFKNVHG 168
Query: 120 EPTYSYYGKMPEMNGLMRKAMSGVSVPFMTSILDGYDGFKGVKRLVDVGGSAG------- 172
Y + GK + N + K+ V L+ Y GF+G+ LVDVGG +G
Sbjct: 169 VTKYEFXGKDKKXNQIFNKSXVDVCATEXKRXLEIYTGFEGISTLVDVGGGSGRNLELII 228
Query: 173 --------INFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLI 224
INFDLP+V+ AP + G+ H+GGD F S+P DA +K V W+D++C
Sbjct: 229 SKYPLIKGINFDLPQVIENAPPLSGIEHVGGDXFASVPQGDAXILKAVCHNWSDEKCIEF 288
Query: 225 MENCYKAIPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHMTEQEFKQL 284
+ NC+KA+ GK+I E +LP++ N S+ ++ + D + G+ TE+++++L
Sbjct: 289 LSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLD--NLXFITVGGRERTEKQYEKL 346
Query: 285 GFSAGFPHLRL 295
+GF ++
Sbjct: 347 SKLSGFSKFQV 357
>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
pdb|2QYO|B Chain B, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
Length = 357
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 145/298 (48%), Gaps = 26/298 (8%)
Query: 19 PLSASQILTRILPSGGGDAENLQRILRLLTNYGVFS--EHREFGGERK-YSLTEIGKSLV 75
P++ S L IL +N+QR++R L + G F ++E E + Y+LT + LV
Sbjct: 51 PITLSN-LVSILQIPSTKVDNVQRLMRYLAHNGFFEIITNQELENEEEAYALTVASELLV 109
Query: 76 TDAEGQSYAPYVLQHHQDALMSAWPLVHEAILDPTIEPFVKVHGEPTYSYYGKMPEMNGL 135
E AP V L +++ + + + + + F G + + K PE N L
Sbjct: 110 KGTE-LCLAPMVECVLDPTLSTSFHNLKKWVYEEDLTLFAVNLGCDLWEFLNKNPEYNTL 168
Query: 136 MRKAMSGVSVPFMTSILDGYDGFKGVKRLVDVGGSAG---------------INFDLPEV 180
A++ S ++ D F+G++ +VDVGG G + FD P+V
Sbjct: 169 YNDALASDSKMINLAMKDCNLVFEGLESIVDVGGGNGTTGKIICETFPKLTCVVFDRPKV 228
Query: 181 VAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKAIPAG---GK 237
V +T++GGDMF S+P ADA+ +K VL WTD +C I++ C +A+ + GK
Sbjct: 229 VENLCGSNNLTYVGGDMFISVPKADAVLLKAVLHDWTDKDCIKILKKCKEAVTSDGKRGK 288
Query: 238 LIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHMTEQEFKQLGFSAGFPHLRL 295
+I + V+ + +E+Q T+ L + +TI GK E+E+K+L AGF ++
Sbjct: 289 VIVIDMVINEKKDENQLTQIKL---LMNVTISCVNGKERNEEEWKKLFIEAGFQDYKI 343
>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone
O-Methyltransferase
Length = 352
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 138/295 (46%), Gaps = 25/295 (8%)
Query: 19 PLSASQILTRILPSGGGDAENLQRILRLLTNYGVFSEHREFGGERKYSLTEIGKSLVTDA 78
P+S S +++ IL N++R++R L + G F + E Y+LT + L+
Sbjct: 51 PISLSNLVS-ILQVPSSKIGNVRRLMRYLAHNGFFEIITK--EEESYALT-VASELLVRG 106
Query: 79 EGQSYAPYVLQHHQDALMSAWPLVHEAILDPTIEPFVKVHGEPTYSYYGKMPEMNGLMRK 138
AP V L ++ + + I + + F G + + K PE N
Sbjct: 107 SDLCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFND 166
Query: 139 AMSGVSVPFMTSILDGYDGFKGVKRLVDVGGSAG---------------INFDLPEVVAE 183
AM+ S ++ D F G++ +VDVGG G I FD P+VV
Sbjct: 167 AMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVEN 226
Query: 184 APSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKAIPAG---GKLIA 240
+T++GGDMF SIP ADA+ +K++L WTD +C I++ C +A+ GK+
Sbjct: 227 LSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTI 286
Query: 241 CEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHMTEQEFKQLGFSAGFPHLRL 295
+ V+ +E+Q T+ L D+ + + GK E+E+K+L AGF H ++
Sbjct: 287 IDMVIDKKKDENQVTQIKLLMDVNMACL---NGKERNEEEWKKLFIEAGFQHYKI 338
>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Isoflavone O-Methyltransferase
Length = 352
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 134/295 (45%), Gaps = 25/295 (8%)
Query: 19 PLSASQILTRILPSGGGDAENLQRILRLLTNYGVFSEHREFGGERKYSLTEIGKSLVTDA 78
P+S S +++ IL N++R+ R L + G F + E Y+LT + L+
Sbjct: 51 PISLSNLVS-ILQVPSSKIGNVRRLXRYLAHNGFFEIITK--EEESYALT-VASELLVRG 106
Query: 79 EGQSYAPYVLQHHQDALMSAWPLVHEAILDPTIEPFVKVHGEPTYSYYGKMPEMNGLMRK 138
AP V L ++ + + I + + F G + + K PE N
Sbjct: 107 SDLCLAPXVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFND 166
Query: 139 AMSGVSVPFMTSILDGYDGFKGVKRLVDVGGSAG---------------INFDLPEVVAE 183
A + S ++ D F G++ +VDVGG G I FD P+VV
Sbjct: 167 AXASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVEN 226
Query: 184 APSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKAIPAG---GKLIA 240
+T++GGD F SIP ADA+ +K++L WTD +C I++ C +A+ GK+
Sbjct: 227 LSGSNNLTYVGGDXFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTI 286
Query: 241 CEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHMTEQEFKQLGFSAGFPHLRL 295
+ V+ +E+Q T+ L D+ + GK E+E+K+L AGF H ++
Sbjct: 287 IDXVIDKKKDENQVTQIKLLXDVNXACL---NGKERNEEEWKKLFIEAGFQHYKI 338
>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone
4'-O-Methyltransferase Complexed With Sah And
2,7,4'-Trihydroxyisoflavanone
Length = 358
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 22/197 (11%)
Query: 119 GEPTYSYYGKMPEMNGL--MRKAMSGVSVPFMTSILDGYDGFKGVKRLVDVGGSAGIN-- 174
GE + + K E + L + AM+ S F + + F+G++ LVDVGG G
Sbjct: 150 GESFWDFLNKDSESSTLSMFQDAMASDSRMFKLVLQENKRVFEGLESLVDVGGGTGGVTK 209
Query: 175 -------------FDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDEC 221
FD P+VV + +GGDMFKSIP+ADA+ +KWVL W D++
Sbjct: 210 LIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWVLHDWNDEQS 269
Query: 222 KLIMENCYKAIP---AGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHMTE 278
I++N +AI GK+I + + + S++ T L+ D+ ++T++ GK T+
Sbjct: 270 LKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFL--GKERTK 327
Query: 279 QEFKQLGFSAGFPHLRL 295
QE+++L + AGF ++
Sbjct: 328 QEWEKLIYDAGFSSYKI 344
>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase
Complexed With (+)-6a-hydroxymaackiain
pdb|1ZHF|A Chain A, Crystal Structure Of Selenomethionine Substituted
Isoflavanone 4'-O- Methyltransferase
Length = 357
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 22/197 (11%)
Query: 119 GEPTYSYYGKMPEMNGL--MRKAMSGVSVPFMTSILDGYDGFKGVKRLVDVGGSAGIN-- 174
GE + + K E + L + AM+ S F + + F+G++ LVDVGG G
Sbjct: 149 GESFWDFLNKDSESSTLSMFQDAMASDSRMFKLVLQENKRVFEGLESLVDVGGGTGGVTK 208
Query: 175 -------------FDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDEC 221
FD P+VV + +GGDMFKSIP+ADA+ +KWVL W D++
Sbjct: 209 LIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWVLHDWNDEQS 268
Query: 222 KLIMENCYKAIP---AGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHMTE 278
I++N +AI GK+I + + + S++ T L+ D+ ++T++ GK T+
Sbjct: 269 LKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFL--GKERTK 326
Query: 279 QEFKQLGFSAGFPHLRL 295
QE+++L + AGF ++
Sbjct: 327 QEWEKLIYDAGFSSYKI 343
>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase
Complexed With (+)-Pisatin
Length = 354
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 22/197 (11%)
Query: 119 GEPTYSYYGKMPEMNGL--MRKAMSGVSVPFMTSILDGYDGFKGVKRLVDVGGSAGIN-- 174
GE + + K E + L + AM+ S F + + F+G++ LVDVGG G
Sbjct: 146 GESFWDFLNKDSESSTLSMFQDAMASDSRMFKLVLQENKRVFEGLESLVDVGGGTGGVTK 205
Query: 175 -------------FDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDEC 221
FD P+VV + +GGDMFKSIP+ADA+ +KWVL W D++
Sbjct: 206 LIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWVLHDWNDEQS 265
Query: 222 KLIMENCYKAIP---AGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHMTE 278
I++N +AI GK+I + + + S++ T L+ D+ ++T++ GK T+
Sbjct: 266 LKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFL--GKERTK 323
Query: 279 QEFKQLGFSAGFPHLRL 295
QE+++L + AGF ++
Sbjct: 324 QEWEKLIYDAGFSSYKI 340
>pdb|3LST|A Chain A, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
pdb|3LST|B Chain B, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
Length = 348
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 117/282 (41%), Gaps = 41/282 (14%)
Query: 40 LQRILRLLTNYGVFSEHREFGGERKYSLTEIGKSLVTDAEGQSYAPYVLQHHQDALMSAW 99
L+R+LRLL V E + +++LT+ G +L +D+ + A + D W
Sbjct: 72 LRRVLRLLAVRDVVRE-----SDGRFALTDKGAALRSDSPVPARAGILX--FTDTXF--W 122
Query: 100 PLVHE--AILDPTIEPFVKVHGEPTYSYYGKMPEMNGLMRKAMSGVSVPFMTSILDGYDG 157
H + L P F + G +Y+ E+ L + VS IL
Sbjct: 123 TXSHRVASALGPERPAFADIFGSSLDAYFDGDAEVEALYYEGXETVSAAEHL-ILARAGD 181
Query: 158 FKGVKRLVDVGGS---------------AGINFDLPEVVA----EAPSIPGVTHI-GGDM 197
F + DVGG G+ D EVVA +AP + G + GD
Sbjct: 182 FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDF 241
Query: 198 FKSIPAADAIFMKWVLTTWTDDECKLIMENCYKAIPAGGKLIACEPVLPDDSNESQRTRA 257
+ +P AD +K +L W D++ I+ NC + PA G+++ + V+P+ ++ Q
Sbjct: 242 LREVPHADVHVLKRILHNWGDEDSVRILTNCRRVXPAHGRVLVIDAVVPEGNDAHQSK-- 299
Query: 258 LLEGDIFVMTIYRAKGKHMTEQEFKQLGFSAGFPHLRLYRVL 299
E D + G+ T E + L +AG LRL RV+
Sbjct: 300 --EXDFXXLAAR--TGQERTAAELEPLFTAAG---LRLDRVV 334
>pdb|2IP2|A Chain A, Structure Of The Pyocyanin Biosynthetic Protein Phzm
pdb|2IP2|B Chain B, Structure Of The Pyocyanin Biosynthetic Protein Phzm
Length = 334
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 124/290 (42%), Gaps = 50/290 (17%)
Query: 34 GGDAENLQRILRLLTNYGVFSEHREFGGERKYSLTEIGKSLVTDAEGQSYAPYVLQHHQD 93
G DAE + R++RLL + +F G R L+ D EG S+ VL + ++
Sbjct: 52 GSDAERIHRLMRLLVAFEIFQ-----GDTRDGYANTPTSHLLRDVEG-SFRDMVLFYGEE 105
Query: 94 ALMSAWPLVHEAILDPTIEPFVKVHGEPTYSYYGKMPEMNGLMRKAMSGVSVPF--MTSI 151
+AW EA+L T F GE YSY + P+ AM ++ F + +
Sbjct: 106 -FHAAWTPACEALLSGT-PGFELAFGEDFYSYLKRCPDAGRRFLLAMKASNLAFHEIPRL 163
Query: 152 LDGYDGFKGVKRLVDVGGSAGINFDLPEVVAEA-PSIPG--------------------- 189
LD F+G + VDVGG +G +L + + +A PS G
Sbjct: 164 LD----FRG-RSFVDVGGGSG---ELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLA 215
Query: 190 ---VTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKL-IMENCYKAIPAGGKLIACEPVL 245
V+ +GGDM + +P+ I++ + D+ L ++ NC +A+ G+++ E +
Sbjct: 216 GERVSLVGGDMLQEVPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTI 275
Query: 246 PDDSNESQRTRALLEGDIFVMTIYRAKGKHMTEQEFKQLGFSAGFPHLRL 295
++E L + +F+ G+H T +E L GF R+
Sbjct: 276 S--ASEPSPMSVLWDVHLFMA----CAGRHRTTEEVVDLLGRGGFAVERI 319
>pdb|1QZZ|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Methionine (Sam)
pdb|1R00|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Homocystein (Sah)
Length = 374
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 32/163 (19%)
Query: 153 DGYDGFKGVKRLVDVGGSAGINFDLPEVVAEAPSIPG----------------------- 189
D YD + V+ ++DVGG G L + AP + G
Sbjct: 176 DAYD-WSAVRHVLDVGGGNGGM--LAAIALRAPHLRGTLVELAGPAERARRRFADAGLAD 232
Query: 190 -VTHIGGDMFKSIPA-ADAIFMKWVLTTWTDDECKLIMENCYKAIPAGGKLIACEPVLPD 247
VT GD FK +P AD + + +VL W+D++ I+ C +A+ GG+L+ + +
Sbjct: 233 RVTVAEGDFFKPLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVE 292
Query: 248 DSNESQRTRALLEGDIFVMTIYRAKGKHMTEQEFKQLGFSAGF 290
+ LL D+ ++T G+ T E L SAG
Sbjct: 293 GDGADRFFSTLL--DLRMLTFM--GGRVRTRDEVVDLAGSAGL 331
>pdb|4A6D|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam
pdb|4A6E|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam And
N-Acetylserotonin
Length = 353
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 98/256 (38%), Gaps = 33/256 (12%)
Query: 60 GGERKYSLTEIGKSLVTDAEGQSYAPYVLQHHQDALMSAWPLVHEAILDPTIEPFVKVHG 119
GG+ Y TE+ +T S +L++ W + +A+ + +++ G
Sbjct: 79 GGKAFYRNTELSSDYLTTVSPTSQCS-MLKYMGRTSYRCWGHLADAVREGR-NQYLETFG 136
Query: 120 EPTYSYYGKMPEMNGLMRKAMSGVSVPFMT---SILDGYDGFKGVKRLVDVGGSAG---- 172
P + + G + M + + S+L +D + D+GG AG
Sbjct: 137 VPAEELFTAIYRSEGERLQFMQALQEVWSVNGRSVLTAFD-LSVFPLMCDLGGGAGALAK 195
Query: 173 -----------INFDLPEVVAEAP---SIPGVTHIG---GDMFKS-IPAADAIFMKWVLT 214
FD+PEVV A S I GD FK +P AD + VL
Sbjct: 196 ECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVLH 255
Query: 215 TWTDDECKLIMENCYKAIPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGK 274
W D +C ++E Y GG ++ E +L +D R LL + + + +G+
Sbjct: 256 DWADGKCSHLLERIYHTCKPGGGILVIESLLDED-----RRGPLLTQLYSLNMLVQTEGQ 310
Query: 275 HMTEQEFKQLGFSAGF 290
T + L SAGF
Sbjct: 311 ERTPTHYHMLLSSAGF 326
>pdb|1XDS|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDS|B Chain B, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDU|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With Sinefungin (Sfg)
Length = 374
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 23/111 (20%)
Query: 190 VTHIGGDMFKSIP-AADAIFMKWVLTTWTDDECKLIMENCYKAIPAGGKLIACEPVLPDD 248
VT GD FK +P AD + + +VL W+D++ I+ C +A+ GG+L+ +
Sbjct: 234 VTVAEGDFFKPLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLD------ 287
Query: 249 SNESQRTRALLEG---DIFVMTIYRAK------GKHMTEQEFKQLGFSAGF 290
RA +EG D F T+ + G+ T E L SAG
Sbjct: 288 -------RADVEGDGADRFFSTLLDLRXLTFXGGRVRTRDEVVDLAGSAGL 331
>pdb|1TW2|A Chain A, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW2|B Chain B, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW3|A Chain A, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
pdb|1TW3|B Chain B, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
Length = 360
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 121/302 (40%), Gaps = 38/302 (12%)
Query: 14 RLANTPLSASQILTRILPSGGGDAENLQRILRLLTNYGVFSEHREFGGERKYSLTEIGKS 73
RL + L+ ++ + + E L R++R L G+ E + GE + TE+G+
Sbjct: 43 RLVDHILAGARTVKALAARTDTRPEALLRLIRHLVAIGLLEE--DAPGE--FVPTEVGEL 98
Query: 74 LVTDAEGQSYAPYVLQHHQDALMSAWPLVHEAILD--PTIEPFVKVHGEPTYSYYGKMPE 131
L D A + L ++ + +AI PT E ++G+P Y P+
Sbjct: 99 LADDHPAAQRAWHDLTQAVARADISFTRLPDAIRTGRPTYE---SIYGKPFYEDLAGRPD 155
Query: 132 MNGLMRKAMSGVSVPFMTSILDGYDGFKGVKRLVDVGGSAGINFDL-----PEVVAEAPS 186
+ ++ + YD + V+ ++DVGG G P V A
Sbjct: 156 LRASFDSLLACDQDVAFDAPAAAYD-WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLE 214
Query: 187 IPG-----------------VTHIGGDMFKSIP-AADAIFMKWVLTTWTDDECKLIMENC 228
+ G V + GD F+ +P ADAI + +VL W D + I+ C
Sbjct: 215 MAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILSFVLLNWPDHDAVRILTRC 274
Query: 229 YKAIPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHMTEQEFKQLGFSA 288
+A+ GG+++ E DD +E+ E D+ ++ G T +++ L SA
Sbjct: 275 AEALEPGGRILIHE---RDDLHENSFNEQFTELDLRMLVFL--GGALRTREKWDGLAASA 329
Query: 289 GF 290
G
Sbjct: 330 GL 331
>pdb|1X19|A Chain A, Crystal Structure Of Bchu Involved In Bacteriochlorophyll
C Biosynthesis
pdb|1X1A|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Methionine
pdb|1X1B|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine
pdb|1X1C|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn2+
pdb|1X1D|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn-Bacteriopheophorbide D
Length = 359
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 23/114 (20%)
Query: 160 GVKRLVDVGG-----SAGINFDLPEVVAEAPSIPGVTH-----------------IGGDM 197
GVK+++DVGG SA + PE+ + ++PG I D+
Sbjct: 190 GVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVADRMRGIAVDI 249
Query: 198 FK-SIPAADAIFMKWVLTTWTDDECKLIMENCYKAIPAGGKLIACEPVLPDDSN 250
+K S P ADA+ +L + + ++ + + A+ +GG+L+ + V+ D N
Sbjct: 250 YKESYPEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPEN 303
>pdb|3GWZ|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GXO|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
Length = 369
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 103/283 (36%), Gaps = 53/283 (18%)
Query: 49 NYGVFSE--HREFGGERKYS---LTEIGKSLVTDAEGQSYAPYVLQHHQDALMSAWPLVH 103
GVF + H + + S L + + TDA Q+ AP+ + AW +
Sbjct: 97 TVGVFDDLGHDDLFAQNALSAVLLPDPASPVATDARFQA-APWHWR--------AWEQLT 147
Query: 104 EAILDPTIEPFVKVHGEPTYSYYGKMPEMNGLMRKAMSGVSVPFMTSILDGYDGFKGVKR 163
++ F +G + + P+ L +A VS+ + YD F G
Sbjct: 148 HSVRTGEAS-FDVANGTSFWQLTHEDPKARELFNRAXGSVSLTEAGQVAAAYD-FSGAAT 205
Query: 164 LVDVGGS---------------AGINFDLPEVVAEAPSIPGVTHIG---------GDMFK 199
VD+GG G + P V EA + +T G GD F+
Sbjct: 206 AVDIGGGRGSLXAAVLDAFPGLRGTLLERPPVAEEAREL--LTGRGLADRCEILPGDFFE 263
Query: 200 SIP-AADAIFMKWVLTTWTDDECKLIMENCYKAIPAGGKLIACEPVLPDDSNESQRTRAL 258
+IP AD +K VL W DD+ I+ A +L+ + ++ + S
Sbjct: 264 TIPDGADVYLIKHVLHDWDDDDVVRILRRIATAXKPDSRLLVIDNLIDERPAASTLFVD- 322
Query: 259 LEGDIFVMTIYRAKGKHMTEQEFKQLGFSAGFPHLRLYRVLDC 301
++ + G +E EF L +G LR+ R L C
Sbjct: 323 ------LLLLVLVGGAERSESEFAALLEKSG---LRVERSLPC 356
>pdb|1DUC|A Chain A, Eiav Dutpase DudpSTRONTIUM COMPLEX
pdb|1DUN|A Chain A, Eiav Dutpase Native
Length = 134
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 46 LLTNYGVFSEHREFGGERKYSLTEIGKSLVTDAEGQSYAPY-VLQHHQDA 94
LL N G+ E + GE + T IGKS + EGQ +A +LQHH ++
Sbjct: 64 LLINGGIIDEG--YTGEIQVICTNIGKSNIKLIEGQKFAQLIILQHHSNS 111
>pdb|3I53|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I53|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I58|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I58|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I5U|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I5U|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I64|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
pdb|3I64|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
Length = 332
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 10/98 (10%)
Query: 195 GDMFKSIPA-ADAIFMKWVLTTWTDDECKLIMENCYKAIPAGGKLIACEPVLPDDSNESQ 253
G F +PA A + VL W D I+ C +A +GG ++ E V D+ +
Sbjct: 226 GSFFDPLPAGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTG 285
Query: 254 RTRALLEGDIFVMTIYRAKGKHMTEQEFKQLGFSAGFP 291
D+ ++T + GK + E +L AG
Sbjct: 286 M-------DLRMLTYF--GGKERSLAELGELAAQAGLA 314
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 37 AENLQRILRLLTNYGVFSEHREFGGERKYSLTEIGKSLVTD 77
A++L R+LR L G+F+ G+ Y LTE G+ L D
Sbjct: 52 ADSLDRLLRHLVAVGLFTRD----GQGVYGLTEFGEQLRDD 88
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 19/149 (12%)
Query: 143 VSVPFMTSILDGYDGFKGVKRLVDVGGSAGINFD-----LPEVVAEAPSIPGVTHIGGDM 197
++ P +I G D G +R V + G FD + + + E S G TH+GG+
Sbjct: 170 INEPTAAAIAYGLDKAVGAERNVLIFSLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 229
Query: 198 FKSIPAADAIFMKWVLTTWTDDECKLIMENCYKAIPAGGKL-IACE---PVLPDDSNESQ 253
F D + + + K I EN A +L ACE L + S
Sbjct: 230 F------DNRMVNHFIAEFKRAHAKDISENKR----AVRRLRTACERAKRTLSSSTQASI 279
Query: 254 RTRALLEGDIFVMTIYRAKGKHMTEQEFK 282
+L EG F +I RA+ + + F+
Sbjct: 280 EIDSLYEGIDFYTSITRARFEELNADLFR 308
>pdb|4AAJ|A Chain A, Structure Of N-(5'-Phosphoribosyl)anthranilate Isomerase
From Pyrococcus Furiosus
Length = 228
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 5/47 (10%)
Query: 9 GGKKGRLANTPLSASQILTRILP---SGGGDAENLQRILRLLTNYGV 52
G G+L + L S ++ R +P +GG +AEN++ +++++ YGV
Sbjct: 155 GAGSGKLHD--LRVSSLVARKIPVIVAGGLNAENVEEVIKVVKPYGV 199
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.138 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,832,359
Number of Sequences: 62578
Number of extensions: 422554
Number of successful extensions: 988
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 937
Number of HSP's gapped (non-prelim): 26
length of query: 301
length of database: 14,973,337
effective HSP length: 98
effective length of query: 203
effective length of database: 8,840,693
effective search space: 1794660679
effective search space used: 1794660679
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)