BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043064
(196 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|118488653|gb|ABK96138.1| unknown [Populus trichocarpa]
Length = 205
Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 159/205 (77%), Positives = 174/205 (84%), Gaps = 9/205 (4%)
Query: 1 MANAEVDALDFE--DDDLMDEDGTADVDASSSPRAPQPKLKSAITGG-------APKKTK 51
MAN E +A+DFE DDDLMDEDG DVDASSSPRAP PKLKSAITGG APKKTK
Sbjct: 1 MANTEAEAVDFEPEDDDLMDEDGAVDVDASSSPRAPLPKLKSAITGGSASPSLSAPKKTK 60
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFG 111
GRGFREE D+ER SR + R F+SLG+DGGPGPQRS+EGWIILV+GVHEEAQ+D LQ FG
Sbjct: 61 GRGFREEVDTERQSRFSGRGFDSLGSDGGPGPQRSVEGWIILVSGVHEEAQDDHLQEAFG 120
Query: 112 EYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
E+GEI+NLHLNLDRRTGFVKGYALIEYENFE+A+NAI +MNGG LL Q + VDWAFSNGP
Sbjct: 121 EFGEIKNLHLNLDRRTGFVKGYALIEYENFEQAENAIASMNGGTLLEQVINVDWAFSNGP 180
Query: 172 STGPFKRKNMRPGRTHRSRSPRRRY 196
S KRKNMRPGRTHRSRSPRRRY
Sbjct: 181 SNWALKRKNMRPGRTHRSRSPRRRY 205
>gi|255544924|ref|XP_002513523.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223547431|gb|EEF48926.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 199
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 158/205 (77%), Positives = 175/205 (85%), Gaps = 15/205 (7%)
Query: 1 MANAEVDALDFE--DDDLMDEDGTADVDASSSPRAPQPKLKSAITGGA------PKKTKG 52
MANA+ +A+DFE +DDLMDEDG D DAS PRAP PKLKSAITGGA P+KTKG
Sbjct: 1 MANADAEAVDFEPEEDDLMDEDGGVDADAS--PRAPLPKLKSAITGGAASSLSAPRKTKG 58
Query: 53 RGFREEADSERHSRLADR-NFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFG 111
RGFREEAD++R +RLA R +F+SLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQN FG
Sbjct: 59 RGFREEADADRQTRLASRGDFDSLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFG 118
Query: 112 EYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
++GEI+NLHLNLDRRTGFVKGYALIEYE FEEAQNAI ++NG ELLTQ + VDWAF NGP
Sbjct: 119 DFGEIKNLHLNLDRRTGFVKGYALIEYEKFEEAQNAIASLNGTELLTQIINVDWAFCNGP 178
Query: 172 STGPFKRKNMRPGRTHRSRSPRRRY 196
+ KRKNMR GRTHRSRSPRRRY
Sbjct: 179 T----KRKNMRSGRTHRSRSPRRRY 199
>gi|224106205|ref|XP_002314085.1| predicted protein [Populus trichocarpa]
gi|222850493|gb|EEE88040.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/196 (74%), Positives = 161/196 (82%), Gaps = 9/196 (4%)
Query: 1 MANAEVDALDFE--DDDLMDEDGTADVDASSSPRAPQPKLKSAITGG-------APKKTK 51
MAN E +A+DFE DDDLMDEDG DVDASSSPRAP PKLKSAITGG APKKTK
Sbjct: 1 MANTEAEAVDFEPEDDDLMDEDGAVDVDASSSPRAPLPKLKSAITGGSASPSLSAPKKTK 60
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFG 111
GRGFREE D+ER SR + R F+SLG+DGGPGPQRS+EGWIILV+GVHEEAQ+D LQ FG
Sbjct: 61 GRGFREEVDTERQSRFSGRGFDSLGSDGGPGPQRSVEGWIILVSGVHEEAQDDHLQEAFG 120
Query: 112 EYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
E+GEI+NLHLNLDRRTGFVKGYALIEYENFE+A+NAI +MNGG LL Q + VDWAFSNGP
Sbjct: 121 EFGEIKNLHLNLDRRTGFVKGYALIEYENFEQAENAIASMNGGTLLEQVINVDWAFSNGP 180
Query: 172 STGPFKRKNMRPGRTH 187
S KRKNMR H
Sbjct: 181 SNWALKRKNMRFVSMH 196
>gi|225431497|ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vinifera]
gi|296088561|emb|CBI37552.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 295 bits (756), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 152/205 (74%), Positives = 172/205 (83%), Gaps = 12/205 (5%)
Query: 1 MANAEVDALDFE--DDDLMDEDGTADVDASSSPRAPQPKLKSAITGGAP-------KKTK 51
MA+A+V+A+DFE DDDLMDEDG DVD +SSPRAP PKLKSAITGGAP KKTK
Sbjct: 1 MASADVEAVDFEPEDDDLMDEDGAVDVD-NSSPRAPLPKLKSAITGGAPSSLAAAPKKTK 59
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFG 111
GRGFR++ D++R+SR A R+F+SL +DGGPGPQRSIEGWIILVTGVHEEAQEDDLQN FG
Sbjct: 60 GRGFRDDTDADRNSRFAARDFDSLDSDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFG 119
Query: 112 EYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
E+GE++NLHLNLDRRTGFVKGYALIEYEN EEAQ AI+AMNG ELLTQT++VDWAFSNGP
Sbjct: 120 EFGEVKNLHLNLDRRTGFVKGYALIEYENLEEAQAAISAMNGTELLTQTISVDWAFSNGP 179
Query: 172 STGPFKRKNMRPGRTHRSRSPRRRY 196
R+ G HRSRSPRRRY
Sbjct: 180 FKRRNMRRRSPRG--HRSRSPRRRY 202
>gi|224059250|ref|XP_002299789.1| predicted protein [Populus trichocarpa]
gi|118484267|gb|ABK94013.1| unknown [Populus trichocarpa]
gi|222847047|gb|EEE84594.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/205 (75%), Positives = 173/205 (84%), Gaps = 9/205 (4%)
Query: 1 MANAEVDALDFE--DDDLMDEDGTADVDASSSPRAPQPKLKSAITGGA-------PKKTK 51
MAN E +A+DFE +DDLMDEDG AD DASSSPRAP PKLKSAITGG+ PKKTK
Sbjct: 1 MANTEAEAVDFEPEEDDLMDEDGAADADASSSPRAPLPKLKSAITGGSASSSLSAPKKTK 60
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFG 111
GRGFREE D+ER SRL+ R F+SLG+DGGPGPQRS+EGWIILV+GVHEEAQ+D LQ FG
Sbjct: 61 GRGFREEVDAERQSRLSGRGFDSLGSDGGPGPQRSVEGWIILVSGVHEEAQDDHLQEAFG 120
Query: 112 EYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
E+GEI+NLHLNLDRRTGFVKGYALIEYE FE+A+NAI +MNGG LL Q + VDWAFSNGP
Sbjct: 121 EFGEIKNLHLNLDRRTGFVKGYALIEYEKFEQAENAIASMNGGTLLEQIIYVDWAFSNGP 180
Query: 172 STGPFKRKNMRPGRTHRSRSPRRRY 196
S +RKNMRP RT+RSRSPRRRY
Sbjct: 181 SNWASRRKNMRPERTNRSRSPRRRY 205
>gi|116789657|gb|ABK25331.1| unknown [Picea sitchensis]
gi|224284327|gb|ACN39899.1| unknown [Picea sitchensis]
Length = 205
Score = 275 bits (703), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 146/209 (69%), Positives = 163/209 (77%), Gaps = 17/209 (8%)
Query: 1 MANAEVDALDFE--DDDLMDEDGTADVDASSSPRAPQPKLKSAITGGA-------PKKTK 51
MA AEVDA+DFE +DDLMD+D D + + P PKLKS ITGG PKKTK
Sbjct: 1 MAGAEVDAVDFEPEEDDLMDDDTAMDDGNADAVPTPAPKLKSTITGGTSQLGDGGPKKTK 60
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFG 111
GRGFREE D+ER+SR A R FESL +DGGPGPQRSIEGWIILVTGVHEEAQEDDL +FG
Sbjct: 61 GRGFREETDAERNSRFAAREFESLDSDGGPGPQRSIEGWIILVTGVHEEAQEDDLHELFG 120
Query: 112 EYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
E+GEI+NLHLNLDRRTGFVKGYALIEYE F+EAQ AIT +NG ELLTQT++VDWAFSN
Sbjct: 121 EFGEIKNLHLNLDRRTGFVKGYALIEYETFKEAQAAITNLNGAELLTQTISVDWAFSN-- 178
Query: 172 STGPFKRKNMR---PGRTHRSRSP-RRRY 196
GPF+RK +R P HRSRSP RRRY
Sbjct: 179 --GPFRRKTVRRRSPRGGHRSRSPVRRRY 205
>gi|297852880|ref|XP_002894321.1| hypothetical protein ARALYDRAFT_892123 [Arabidopsis lyrata subsp.
lyrata]
gi|297340163|gb|EFH70580.1| hypothetical protein ARALYDRAFT_892123 [Arabidopsis lyrata subsp.
lyrata]
Length = 201
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 134/185 (72%), Positives = 153/185 (82%), Gaps = 5/185 (2%)
Query: 1 MANAEVDALDFE--DDDLMDEDGTADVDASSSPRAPQPKLKSAITGG---APKKTKGRGF 55
MAN E +A+DFE +DDLMDEDGTA A SPRA P+LKSAI G + KKTKGRGF
Sbjct: 1 MANIESEAVDFEPEEDDLMDEDGTAIDGADVSPRAGHPRLKSAIAGANGESAKKTKGRGF 60
Query: 56 REEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGE 115
REE DS+R RL+ R+FESLG+DGG GPQRSIEGWIILV+GVHEEAQEDDL N FG++GE
Sbjct: 61 REEKDSDRQRRLSSRDFESLGSDGGRGPQRSIEGWIILVSGVHEEAQEDDLTNAFGDFGE 120
Query: 116 IRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGP 175
I+NLHLNLDRRTGFVKGYALIEYE +EEAQ AI+AMNG ELLTQ ++VDWAFS GPS
Sbjct: 121 IKNLHLNLDRRTGFVKGYALIEYEKYEEAQKAISAMNGAELLTQNVSVDWAFSRGPSAES 180
Query: 176 FKRKN 180
++RKN
Sbjct: 181 YRRKN 185
>gi|30524687|emb|CAC85245.1| salt tolerance protein 4 [Beta vulgaris]
Length = 203
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/206 (68%), Positives = 162/206 (78%), Gaps = 13/206 (6%)
Query: 1 MANAEVDALDFE--DDDLMDEDGTADVDASSSPRAPQPKLKSAITG-GAP-------KKT 50
MA A+V+A+DFE +DDLMDEDG A +A SPRAP PK+KSAITG GAP KKT
Sbjct: 1 MAAADVEAVDFEPEEDDLMDEDGGA-AEADGSPRAPHPKIKSAITGAGAPSSGGFGAKKT 59
Query: 51 KGRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
KGRGFRE+AD+ER+SR+ R F+SL +DGGPGP RSIEGWIILVTGVHEEAQE+DL NVF
Sbjct: 60 KGRGFREDADAERNSRMTAREFDSLDSDGGPGPARSIEGWIILVTGVHEEAQEEDLLNVF 119
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
GE+G+++NLHLNLDRRTGFVKGYALIEYE FEEAQ AI MNG ++L Q + VDWAF NG
Sbjct: 120 GEFGQLKNLHLNLDRRTGFVKGYALIEYEKFEEAQAAIKEMNGAKMLEQPINVDWAFCNG 179
Query: 171 PSTGPFKRKNMRPGRTHRSRSPRRRY 196
P R+ G HRSRSPRRRY
Sbjct: 180 PYRRRGNRRRSPRG--HRSRSPRRRY 203
>gi|76573355|gb|ABA46782.1| unknown [Solanum tuberosum]
Length = 195
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/204 (69%), Positives = 166/204 (81%), Gaps = 17/204 (8%)
Query: 1 MANAEVDALDFE--DDDLMDEDGTADVDASSSPRAPQPKLKSAITGG---APKKTKGRGF 55
MANAEV+A+DFE +DDLMDED VDASSSPRA PKLKSAITGG APKKTKGRGF
Sbjct: 1 MANAEVEAVDFEPEEDDLMDED----VDASSSPRATIPKLKSAITGGSSSAPKKTKGRGF 56
Query: 56 REEA-DSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYG 114
REEA +++R++R++ R F+SL ++GGPGP+RSIEGWI+LVTGV+EE QEDDL N FGE+G
Sbjct: 57 REEAAEADRNARMSAR-FDSLDSEGGPGPERSIEGWIVLVTGVNEETQEDDLHNDFGEFG 115
Query: 115 EIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTG 174
EI+NLHLNLDRRTGFVKGYA IEYE+FEEAQ AI+ +G E LTQT+ V WAFS G
Sbjct: 116 EIKNLHLNLDRRTGFVKGYAFIEYESFEEAQRAISEKDGAEFLTQTIHVAWAFSR----G 171
Query: 175 PFKRKNM--RPGRTHRSRSPRRRY 196
PFKR+N R HRSRSPRRR+
Sbjct: 172 PFKRRNARRRSPHGHRSRSPRRRF 195
>gi|449442559|ref|XP_004139049.1| PREDICTED: RNA-binding protein 8A-like [Cucumis sativus]
Length = 197
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/193 (72%), Positives = 160/193 (82%), Gaps = 17/193 (8%)
Query: 1 MANAEVDALDFE--DDDLMDEDGTADVDASSSPRAPQPKLKSAITGGA-------PKKTK 51
MA+A+V+A+DFE +DDLMDEDG A+ DAS PRAP PKLKSAITGGA PKKTK
Sbjct: 1 MASADVEAVDFEPEEDDLMDEDGAAEADAS--PRAPFPKLKSAITGGASSSLSGGPKKTK 58
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFG 111
GRGFREE+D R++RLA +F+SL + GPGPQRSIEGWIILVTGVHEEAQEDDLQN FG
Sbjct: 59 GRGFREESD--RNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFG 116
Query: 112 EYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
E+GEI+NLHLNLDRRTGFVKGYALIEYE+FEEA+ AI+AM+G ELLTQ + VDWAFS+
Sbjct: 117 EFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSH-- 174
Query: 172 STGPFKRKNMRPG 184
GP +RKN RP
Sbjct: 175 --GPIRRKNARPA 185
>gi|356497345|ref|XP_003517521.1| PREDICTED: RNA-binding protein 8A-like [Glycine max]
Length = 197
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/180 (73%), Positives = 148/180 (82%), Gaps = 7/180 (3%)
Query: 4 AEVDALDFE--DDDLMDEDGTADVDASSSPRAPQPKLKSAIT-GGAPKKTKGRGFREEAD 60
A+ +ALDFE DDDLMDEDG D DAS PQPKLKSAIT APKKTKGRGFR++ D
Sbjct: 6 ADGEALDFEPEDDDLMDEDGAPDADASP----PQPKLKSAITAAAAPKKTKGRGFRQDTD 61
Query: 61 SERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLH 120
+ R +RL+ +F+SL T+GGPGPQRSIEGWIILVTGVHEEAQEDDLQN FGEYGEI+NLH
Sbjct: 62 ANRDTRLSGSDFDSLTTEGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEYGEIKNLH 121
Query: 121 LNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKN 180
LNLDRRTGFVKGYALIEYE EEA+NAI +NG ELLTQT+ VDWAFS+GP +RKN
Sbjct: 122 LNLDRRTGFVKGYALIEYERAEEARNAIENLNGSELLTQTIYVDWAFSSGPINESVRRKN 181
>gi|18403559|ref|NP_564591.1| RNA-binding protein 8A [Arabidopsis thaliana]
gi|332194554|gb|AEE32675.1| RNA-binding protein 8A [Arabidopsis thaliana]
Length = 202
Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 129/190 (67%), Positives = 156/190 (82%), Gaps = 6/190 (3%)
Query: 1 MANAEVDALDFE--DDDLMDEDGTADVDASSSPRAPQPKLKSAITGG---APKKTKGRGF 55
MAN E +A+DFE +DDLMDE+GTA A SPRA P+LKSAI G + KKTKGRGF
Sbjct: 1 MANIESEAVDFEPEEDDLMDEEGTAIDGADVSPRAGHPRLKSAIAGANGESAKKTKGRGF 60
Query: 56 REEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGE 115
REE DS+R RL+ R+FESLG+DG PGPQRS+EGWIILV+GVHEE QE+D+ N FG++GE
Sbjct: 61 REEKDSDRQRRLSSRDFESLGSDGRPGPQRSVEGWIILVSGVHEETQEEDITNAFGDFGE 120
Query: 116 IRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTG- 174
I+NL+LNLDRR+G+VKGYALIEYE EEAQ+AI+AMNG ELLTQ ++VDWAFS+GPS G
Sbjct: 121 IKNLNLNLDRRSGYVKGYALIEYEKKEEAQSAISAMNGAELLTQNVSVDWAFSSGPSGGE 180
Query: 175 PFKRKNMRPG 184
++RKN R G
Sbjct: 181 SYRRKNSRYG 190
>gi|12325357|gb|AAG52616.1|AC024261_3 RNA-binding protein, putative; 35994-37391 [Arabidopsis thaliana]
Length = 191
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 128/188 (68%), Positives = 155/188 (82%), Gaps = 6/188 (3%)
Query: 1 MANAEVDALDFE--DDDLMDEDGTADVDASSSPRAPQPKLKSAITGG---APKKTKGRGF 55
MAN E +A+DFE +DDLMDE+GTA A SPRA P+LKSAI G + KKTKGRGF
Sbjct: 1 MANIESEAVDFEPEEDDLMDEEGTAIDGADVSPRAGHPRLKSAIAGANGESAKKTKGRGF 60
Query: 56 REEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGE 115
REE DS+R RL+ R+FESLG+DG PGPQRS+EGWIILV+GVHEE QE+D+ N FG++GE
Sbjct: 61 REEKDSDRQRRLSSRDFESLGSDGRPGPQRSVEGWIILVSGVHEETQEEDITNAFGDFGE 120
Query: 116 IRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTG- 174
I+NL+LNLDRR+G+VKGYALIEYE EEAQ+AI+AMNG ELLTQ ++VDWAFS+GPS G
Sbjct: 121 IKNLNLNLDRRSGYVKGYALIEYEKKEEAQSAISAMNGAELLTQNVSVDWAFSSGPSGGE 180
Query: 175 PFKRKNMR 182
++RKN R
Sbjct: 181 SYRRKNSR 188
>gi|21536738|gb|AAM61070.1| RNA-binding protein, putative [Arabidopsis thaliana]
Length = 202
Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 128/190 (67%), Positives = 156/190 (82%), Gaps = 6/190 (3%)
Query: 1 MANAEVDALDFE--DDDLMDEDGTADVDASSSPRAPQPKLKSAITGG---APKKTKGRGF 55
MAN E +A+DFE +DDLMDE+GTA A SPRA P+LKSAI G + KKTKGRGF
Sbjct: 1 MANIESEAVDFEPEEDDLMDEEGTAIDGADVSPRAGHPRLKSAIAGANGESAKKTKGRGF 60
Query: 56 REEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGE 115
R+E DS+R RL+ R+FESLG+DG PGPQRS+EGWIILV+GVHEE QE+D+ N FG++GE
Sbjct: 61 RDEKDSDRQRRLSSRDFESLGSDGRPGPQRSVEGWIILVSGVHEETQEEDITNAFGDFGE 120
Query: 116 IRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTG- 174
I+NL+LNLDRR+G+VKGYALIEYE EEAQ+AI+AMNG ELLTQ ++VDWAFS+GPS G
Sbjct: 121 IKNLNLNLDRRSGYVKGYALIEYEKKEEAQSAISAMNGAELLTQNVSVDWAFSSGPSGGE 180
Query: 175 PFKRKNMRPG 184
++RKN R G
Sbjct: 181 SYRRKNSRYG 190
>gi|82798422|gb|ABB91897.1| Y14 protein [Taiwania cryptomerioides]
Length = 216
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 137/217 (63%), Positives = 155/217 (71%), Gaps = 22/217 (10%)
Query: 1 MANAEVDALDFE--DDDLMDEDGTAD-----VDASSSPRAPQPKLKSAITGGA------- 46
MA AEVDA+DFE +DDLM++D T D + P P PKL+S ITG
Sbjct: 1 MAGAEVDAVDFEPEEDDLMEDDATMDEANAGATGEAVPMVPAPKLRSTITGTTSQLQLSD 60
Query: 47 ------PKKTKGRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEE 100
PKKTKGRGFREE D ER++R R+F+SL +DGGPGPQRSIEGWIILVTGVHEE
Sbjct: 61 GHGHDPPKKTKGRGFREETDFERNTRFTARDFDSLNSDGGPGPQRSIEGWIILVTGVHEE 120
Query: 101 AQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQT 160
AQE DLQ +FGE+GEI+NLHLNLDRRTGFVKGYALIEYE F EAQ AI +NG ELLTQT
Sbjct: 121 AQEVDLQELFGEHGEIKNLHLNLDRRTGFVKGYALIEYETFNEAQAAIENLNGAELLTQT 180
Query: 161 LTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSP-RRRY 196
++VDWAFSNGP + P HRSRSP RRRY
Sbjct: 181 ISVDWAFSNGPFRRR-NNRRRSPRGGHRSRSPVRRRY 216
>gi|390432207|gb|AFL91695.1| RNA binding protein [Raphanus sativus var. raphanistroides]
Length = 200
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 126/189 (66%), Positives = 153/189 (80%), Gaps = 12/189 (6%)
Query: 1 MANAEVDALDFE--DDDLMDED-GTADVDASSSPRAPQPKLKSAITGG----APKKTKGR 53
MAN E +A+DFE +DDLMDED G AD+ SPRA P+L+SAI+G A +KTKGR
Sbjct: 1 MANLEAEAVDFEPEEDDLMDEDLGAADI----SPRAAHPRLRSAISGADDESANRKTKGR 56
Query: 54 GFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEY 113
GFREE DS+R RL+ R+ ES G+DGGPGPQRS+EGWI+LVTGVHEEAQEDD+ N FG++
Sbjct: 57 GFREEKDSDRQRRLSSRDLESFGSDGGPGPQRSVEGWIVLVTGVHEEAQEDDIFNPFGDF 116
Query: 114 GEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP-S 172
GEI++LHLN D RTGFVKGYALIEYE EEAQNAI AMNG E+LT+ ++VDWAFSNGP +
Sbjct: 117 GEIKSLHLNFDPRTGFVKGYALIEYEKSEEAQNAIKAMNGAEILTKNVSVDWAFSNGPNN 176
Query: 173 TGPFKRKNM 181
G ++R+NM
Sbjct: 177 AGFYRRRNM 185
>gi|357481339|ref|XP_003610955.1| RNA-binding protein 8A [Medicago truncatula]
gi|355512290|gb|AES93913.1| RNA-binding protein 8A [Medicago truncatula]
gi|388501280|gb|AFK38706.1| unknown [Medicago truncatula]
Length = 193
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 125/171 (73%), Positives = 144/171 (84%), Gaps = 8/171 (4%)
Query: 4 AEVDALDFE--DDDLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEADS 61
A+ +ALDFE +DDLMDE+G VDA +SP P PKLKSAIT PKKTKGRGFR+++DS
Sbjct: 6 ADGEALDFEPEEDDLMDEEGA--VDAEASP--PHPKLKSAIT-SVPKKTKGRGFRQDSDS 60
Query: 62 E-RHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLH 120
R+SRLAD F++L +GGPGPQRSIEGWIILVTGVHEEAQ+DDLQN FGEYG+I+NLH
Sbjct: 61 SNRNSRLADSGFDTLTAEGGPGPQRSIEGWIILVTGVHEEAQDDDLQNAFGEYGDIKNLH 120
Query: 121 LNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
LNLDRRTGFVKGYALIEYE EEA+NAI +NG LLTQT+ VDWAFS+GP
Sbjct: 121 LNLDRRTGFVKGYALIEYERSEEARNAIENLNGSVLLTQTIYVDWAFSSGP 171
>gi|351720720|ref|NP_001236162.1| uncharacterized protein LOC100527187 [Glycine max]
gi|255631742|gb|ACU16238.1| unknown [Glycine max]
Length = 204
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/185 (68%), Positives = 145/185 (78%), Gaps = 10/185 (5%)
Query: 4 AEVDALDFE--DDDLMDEDGTADVDASSSPRAPQPKLKSAITGGA------PKKTKGRGF 55
A+ +ALDFE DDDLMDE DA + PQPKLKSAIT A PKKTKGRGF
Sbjct: 6 ADGEALDFEPEDDDLMDE--DGAPDADADASPPQPKLKSAITPAATSSLSAPKKTKGRGF 63
Query: 56 REEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGE 115
R++ D+ R++RL+ +F+SL +GGPGPQRSIEGWIILVTGVHEEAQEDDLQN FGEYGE
Sbjct: 64 RQDTDANRNTRLSGTDFDSLTAEGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEYGE 123
Query: 116 IRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGP 175
I+NLHLNLDRRTGFVKGYALIEYE EEA+NAI +NG ELLTQT+ VDWAFS+GP
Sbjct: 124 IKNLHLNLDRRTGFVKGYALIEYERAEEARNAIENLNGSELLTQTIYVDWAFSSGPINES 183
Query: 176 FKRKN 180
+RKN
Sbjct: 184 VRRKN 188
>gi|155964979|gb|ABU40522.1| Y14-like protein [Marsilea vestita]
Length = 203
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/174 (67%), Positives = 133/174 (76%), Gaps = 12/174 (6%)
Query: 33 APQPKLKSAITGGAP--------KKTKGRGFREEADSERHSRLADRNFESLGTDGGPGPQ 84
AP PKLKS ITGG+ KKTKGRGFR+ D +R SR A + FE L +DGGPGPQ
Sbjct: 32 APAPKLKSTITGGSSRNNVGGGVKKTKGRGFRDGGDPDRSSRFAGKEFEFLSSDGGPGPQ 91
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWIILVTGVHEEAQEDDL +FGE+GEI+NLHLNL+RRTGFVKGYALIEYE +EA
Sbjct: 92 RSIEGWIILVTGVHEEAQEDDLHELFGEFGEIKNLHLNLNRRTGFVKGYALIEYEKKQEA 151
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGP-STGPFKRKNMRPGRTHRSRSP-RRRY 196
Q AI +NG +LLTQT+ VDWAFS+GP G RK R R HRSRSP +RRY
Sbjct: 152 QAAINQLNGAQLLTQTIAVDWAFSSGPLRKGRNARK--RSPRGHRSRSPVKRRY 203
>gi|168011129|ref|XP_001758256.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690712|gb|EDQ77078.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 214
Score = 218 bits (555), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 118/202 (58%), Positives = 143/202 (70%), Gaps = 26/202 (12%)
Query: 1 MANAEV-DALDFE--DDDLMDEDGTADVDASSSPRAPQPKLKSAITGGAP---------- 47
M AEV DA+DFE +DDL+DED ++ +P AP PKL+S I+ G
Sbjct: 1 MTTAEVVDAVDFEPEEDDLLDED--VAMEDLETPAAPAPKLRSTISTGGAGGGSRVGGGG 58
Query: 48 -------KKTKGRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEE 100
+KTKGRGFR+EAD++R R ++ FESL GGPGPQRS+EGWIILVTGVHEE
Sbjct: 59 SAAAVDGRKTKGRGFRDEADADRSHRYTEKEFESLDGSGGPGPQRSVEGWIILVTGVHEE 118
Query: 101 AQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQT 160
AQEDDL F E+GEI+NLHLNLDRRTGFVKGYALIEYE +EAQ AI MNG +LLTQT
Sbjct: 119 AQEDDLHESFSEFGEIKNLHLNLDRRTGFVKGYALIEYETKKEAQGAIDNMNGKQLLTQT 178
Query: 161 LTVDWAFSNGPSTGPFKRKNMR 182
++V+WAF S+GP R+N+R
Sbjct: 179 ISVNWAF----SSGPLHRRNVR 196
>gi|302784114|ref|XP_002973829.1| hypothetical protein SELMODRAFT_100512 [Selaginella moellendorffii]
gi|302803616|ref|XP_002983561.1| hypothetical protein SELMODRAFT_118264 [Selaginella moellendorffii]
gi|300148804|gb|EFJ15462.1| hypothetical protein SELMODRAFT_118264 [Selaginella moellendorffii]
gi|300158161|gb|EFJ24784.1| hypothetical protein SELMODRAFT_100512 [Selaginella moellendorffii]
Length = 193
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/198 (58%), Positives = 143/198 (72%), Gaps = 7/198 (3%)
Query: 1 MANAEVDALDFE--DDDLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREE 58
MA A++DA+DFE +DDL+DED V APQP+++S I GGAPK TKGRGFR+E
Sbjct: 1 MATADMDAVDFEPEEDDLLDED----VAMEDVEPAPQPRVRSTIIGGAPKHTKGRGFRDE 56
Query: 59 ADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRN 118
S+R +R A R+F+++ +D G Q+SIEGWIILVTGVHEEAQEDD+ +F + G I+N
Sbjct: 57 GSSDRSNRFA-RDFDTIVSDDKDGAQKSIEGWIILVTGVHEEAQEDDVHEMFADAGVIKN 115
Query: 119 LHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKR 178
L+LNLDRRTGFVKGYALIEYE+ EEAQ AI+ NG ELLTQT++VDWAF +GPS+ R
Sbjct: 116 LNLNLDRRTGFVKGYALIEYEHKEEAQAAISNFNGAELLTQTISVDWAFKSGPSSHQSSR 175
Query: 179 KNMRPGRTHRSRSPRRRY 196
N RRRY
Sbjct: 176 SNRSRKSHRSRSPARRRY 193
>gi|168037614|ref|XP_001771298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677387|gb|EDQ63858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 199
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 140/203 (68%), Gaps = 27/203 (13%)
Query: 1 MANAEV-DALDFE--DDDLMDEDGTADVDASSSPRAPQPKLKSAITGGAP---------- 47
M AEV DA+DFE +DDL+DED ++ +P AP PKLKS I
Sbjct: 1 MTTAEVVDAVDFEPEEDDLLDED--VAMEELDAPPAPPPKLKSTIITSGTGGGSRMGGGA 58
Query: 48 --------KKTKGRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHE 99
+KTKGRGFREE D++R R A + FESL + GGPGPQRS+EGWIILVTGVHE
Sbjct: 59 AAAAAAAGRKTKGRGFREEGDADRSHRYAVKEFESLDSGGGPGPQRSVEGWIILVTGVHE 118
Query: 100 EAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQ 159
EAQEDDL F E+GEI+NLHLNLDRRTGFVKGYALIEYE +EAQ AI NG +LLTQ
Sbjct: 119 EAQEDDLHEAFSEFGEIKNLHLNLDRRTGFVKGYALIEYETKKEAQAAIDNQNGKQLLTQ 178
Query: 160 TLTVDWAFSNGPSTGPFKRKNMR 182
T++V+WAF S+GP R+N+R
Sbjct: 179 TISVNWAF----SSGPLHRRNVR 197
>gi|357134735|ref|XP_003568971.1| PREDICTED: RNA-binding protein 8A-like [Brachypodium distachyon]
Length = 207
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 129/172 (75%), Gaps = 21/172 (12%)
Query: 33 APQPKLKSAITGGA-----PKKTKGRGFREEADSE---RHSRLAD---RNFESLGTDGGP 81
AP P+L+S I GG P++TKGRGFRE+ +S R SRLA F++L +DGGP
Sbjct: 34 APAPRLRSTIAGGGGGGDGPRRTKGRGFREDPNSSAAPRDSRLAGVGRSGFDALASDGGP 93
Query: 82 GPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENF 141
GP RSIEGWI+LVTGVHEEAQEDDL N+F +GE++NLHLNLDRRTGFVKGYALIEYENF
Sbjct: 94 GPVRSIEGWIVLVTGVHEEAQEDDLHNIFRGFGEVKNLHLNLDRRTGFVKGYALIEYENF 153
Query: 142 EEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPR 193
EEAQ AI A +G ELLTQ ++VDWAFSNGP+ KR+N R RSPR
Sbjct: 154 EEAQAAIKASDGTELLTQIISVDWAFSNGPA----KRRNT------RKRSPR 195
>gi|357132201|ref|XP_003567720.1| PREDICTED: RNA-binding protein 8A-like [Brachypodium distachyon]
Length = 192
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/148 (68%), Positives = 115/148 (77%), Gaps = 10/148 (6%)
Query: 33 APQPKLKSAITGG-------APKKTKGRGFREEADSERHSRLADRN-FESLGTDGGPGPQ 84
AP P+L+S I G A +KTKGRGFREE S R L R F+SLGTD GPGP
Sbjct: 30 APAPRLRSTIAAGGEDSSAAAARKTKGRGFREEPSSSRP--LTGRAAFDSLGTDDGPGPL 87
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWI+LVTGVHEEAQEDDL N F E+G+++NLHLNLDRRTGFVKGYALIEYE+FEEA
Sbjct: 88 RSIEGWIVLVTGVHEEAQEDDLHNAFREFGQVKNLHLNLDRRTGFVKGYALIEYESFEEA 147
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGPS 172
Q AI M+G EL+TQ + VDWAFSNGP+
Sbjct: 148 QAAIKTMDGTELVTQIINVDWAFSNGPA 175
>gi|68037220|gb|AAY84882.1| mRNA transport factor [Triticum aestivum]
Length = 209
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/151 (66%), Positives = 121/151 (80%), Gaps = 12/151 (7%)
Query: 33 APQPKLKSAITGG------APKKTKGRGFREEADS---ERHSRLAD---RNFESLGTDGG 80
AP P+L+S I GG AP+KTKGRGFRE+ +S R SRLA F++L +DGG
Sbjct: 34 APAPRLRSTIAGGGGDDDDAPRKTKGRGFREDPNSSSAHRDSRLAGAGRSGFDALASDGG 93
Query: 81 PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYEN 140
PGP RSIEGWI+LVTGVHEEAQE+DL N+FG+YG+++NLHLNLDRRTGFVKGYALIEYEN
Sbjct: 94 PGPVRSIEGWIVLVTGVHEEAQEEDLHNIFGDYGQVKNLHLNLDRRTGFVKGYALIEYEN 153
Query: 141 FEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
FE+A+ AI +G ELL+Q ++VDWAFSNGP
Sbjct: 154 FEQAKRAIRESDGTELLSQIISVDWAFSNGP 184
>gi|125550786|gb|EAY96495.1| hypothetical protein OsI_18397 [Oryza sativa Indica Group]
Length = 195
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 97/139 (69%), Positives = 117/139 (84%), Gaps = 9/139 (6%)
Query: 48 KKTKGRGFREEADSERHSRLAD----RNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQE 103
+KTKGRGFR++A + R SRLA +F+SLG+DGGPGP RSIEGWI+LVTGVHEEAQE
Sbjct: 53 RKTKGRGFRDDA-APRDSRLAGAGRASDFDSLGSDGGPGPVRSIEGWIVLVTGVHEEAQE 111
Query: 104 DDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTV 163
DDL N+F ++G+++NLHLNLDRRTGFVKGYALIEYE FEEAQ AI A++G ELLTQ ++V
Sbjct: 112 DDLHNIFRDFGQVKNLHLNLDRRTGFVKGYALIEYETFEEAQAAIKALDGTELLTQIISV 171
Query: 164 DWAFSNGPSTGPFKRKNMR 182
DWAFSN GP KR+N+R
Sbjct: 172 DWAFSN----GPVKRRNIR 186
>gi|215769434|dbj|BAH01663.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 204
Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 97/139 (69%), Positives = 117/139 (84%), Gaps = 9/139 (6%)
Query: 48 KKTKGRGFREEADSERHSRLAD----RNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQE 103
+KTKGRGFR++A + R SRLA +F+SLG+DGGPGP RSIEGWI+LVTGVHEEAQE
Sbjct: 56 RKTKGRGFRDDA-APRDSRLAGAGRASDFDSLGSDGGPGPVRSIEGWIVLVTGVHEEAQE 114
Query: 104 DDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTV 163
DDL N+F ++G+++NLHLNLDRRTGFVKGYALIEYE FEEAQ AI A++G ELLTQ ++V
Sbjct: 115 DDLHNIFRDFGQVKNLHLNLDRRTGFVKGYALIEYETFEEAQAAIKALDGTELLTQIISV 174
Query: 164 DWAFSNGPSTGPFKRKNMR 182
DWAFSN GP KR+N+R
Sbjct: 175 DWAFSN----GPVKRRNIR 189
>gi|226500468|ref|NP_001147154.1| RNA-binding protein 8A [Zea mays]
gi|195607770|gb|ACG25715.1| RNA-binding protein 8A [Zea mays]
gi|413917620|gb|AFW57552.1| RNA-binding protein 8A [Zea mays]
Length = 198
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 102/166 (61%), Positives = 122/166 (73%), Gaps = 5/166 (3%)
Query: 33 APQPKLKSAITGG-APKKTKGRGFREEADSE--RHSRLADRNFESLGTDGGPGPQRSIEG 89
AP +L+S I G AP++TKGRGFRE+ +S R SR L + GGPGP +SIEG
Sbjct: 33 APTSRLRSTIAGDDAPRRTKGRGFREDPNSSAPRDSRFGAGGRADLDSLGGPGPIQSIEG 92
Query: 90 WIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAIT 149
WI+LVTGVHEEAQEDDLQN F E+G+++NLHLNLDRRTGFVKGYALIEYE FEEAQ AI
Sbjct: 93 WIVLVTGVHEEAQEDDLQNAFQEFGQVKNLHLNLDRRTGFVKGYALIEYEKFEEAQAAIK 152
Query: 150 AMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
++G EL Q ++VDWAFS+GP+ F RK P RSR+P RR
Sbjct: 153 ELDGAELYEQKMSVDWAFSSGPAKRRFTRKRSPP--RARSRTPPRR 196
>gi|226504528|ref|NP_001150559.1| RNA-binding protein 8A [Zea mays]
gi|195640204|gb|ACG39570.1| RNA-binding protein 8A [Zea mays]
Length = 198
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 102/166 (61%), Positives = 122/166 (73%), Gaps = 5/166 (3%)
Query: 33 APQPKLKSAITGG-APKKTKGRGFREEADSE--RHSRLADRNFESLGTDGGPGPQRSIEG 89
AP +L+S I G AP++TKGRGFRE+ +S R SR L + GGPGP +SIEG
Sbjct: 33 APTSRLRSTIAGDDAPRRTKGRGFREDPNSSAPRDSRFGAGVRADLDSLGGPGPIQSIEG 92
Query: 90 WIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAIT 149
WI+LVTGVHEEAQEDDLQN F E+G+++NLHLNLDRRTGFVKGYALIEYE FEEAQ AI
Sbjct: 93 WIVLVTGVHEEAQEDDLQNAFQEFGQVKNLHLNLDRRTGFVKGYALIEYEKFEEAQAAIK 152
Query: 150 AMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
++G EL Q ++VDWAFS+GP+ F RK P RSR+P RR
Sbjct: 153 ELDGAELYEQKMSVDWAFSSGPAKRRFTRKRSPP--RARSRTPPRR 196
>gi|242086833|ref|XP_002439249.1| hypothetical protein SORBIDRAFT_09g003130 [Sorghum bicolor]
gi|241944534|gb|EES17679.1| hypothetical protein SORBIDRAFT_09g003130 [Sorghum bicolor]
Length = 200
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 101/166 (60%), Positives = 123/166 (74%), Gaps = 10/166 (6%)
Query: 37 KLKSAITGG-APKKTKGRGFREEADSERH--SRLADRNFESLGTDGGPGPQRSIEGWIIL 93
+L+S I G AP++TKGRGFRE+ +S H SR L + GGPGP +SIEGWI+L
Sbjct: 39 RLRSTIAGDDAPRRTKGRGFREDPNSSAHRDSRFGAGGRADLDSLGGPGPIQSIEGWIVL 98
Query: 94 VTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNG 153
VTGVHEEAQEDDLQN F E+G+++NLHLNLDRRTGFVKGYALIEYE FEEAQ AI ++G
Sbjct: 99 VTGVHEEAQEDDLQNAFQEFGQVKNLHLNLDRRTGFVKGYALIEYEKFEEAQAAIKELDG 158
Query: 154 GELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRS---PRRRY 196
EL Q ++VDWAFS+GP+ KR+N R R+RS PRRR+
Sbjct: 159 AELHEQIMSVDWAFSSGPA----KRRNTRKRSPPRARSRTPPRRRH 200
>gi|226497284|ref|NP_001150298.1| LOC100283928 [Zea mays]
gi|195638166|gb|ACG38551.1| RNA-binding protein 8A [Zea mays]
gi|238008470|gb|ACR35270.1| unknown [Zea mays]
gi|413950020|gb|AFW82669.1| RNA-binding protein 8A [Zea mays]
Length = 199
Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 101/166 (60%), Positives = 123/166 (74%), Gaps = 10/166 (6%)
Query: 37 KLKSAITGG-APKKTKGRGFREEADSE--RHSRLADRNFESLGTDGGPGPQRSIEGWIIL 93
+L+S I G AP++TKGRGFRE+ +S R SR L + GGPGP +SIEGWI+L
Sbjct: 38 RLRSTIAGDDAPRRTKGRGFREDPNSSATRDSRFGAGGRADLDSLGGPGPIQSIEGWIVL 97
Query: 94 VTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNG 153
VTGVHEEAQEDDLQN F E+G+++NLHLNLDRRTGFVKGYALIEYE FEEAQ AI ++G
Sbjct: 98 VTGVHEEAQEDDLQNAFQEFGQVKNLHLNLDRRTGFVKGYALIEYEKFEEAQAAIKELDG 157
Query: 154 GELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRS---PRRRY 196
EL Q ++VDWAFS+GP+ KR+N R R+RS PRRR+
Sbjct: 158 AELYKQRMSVDWAFSSGPA----KRRNTRKRSPPRARSRTPPRRRH 199
>gi|449528077|ref|XP_004171033.1| PREDICTED: RNA-binding protein 8A-like [Cucumis sativus]
Length = 109
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/99 (77%), Positives = 87/99 (87%), Gaps = 4/99 (4%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
+IEGWIILVTGVHEEAQEDDLQN FGE+GEI+NLHLNLDRRTGFVKGYALIEYE+FEEA+
Sbjct: 3 AIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAE 62
Query: 146 NAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPG 184
AI+AM+G ELLTQ + VDWAFS+ GP +RKN RP
Sbjct: 63 KAISAMDGAELLTQIINVDWAFSH----GPIRRKNARPA 97
>gi|442751093|gb|JAA67706.1| Putative rna binding motif protein 8a [Ixodes ricinus]
Length = 171
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 108/160 (67%), Gaps = 11/160 (6%)
Query: 15 DLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEADSERHSRLADRNFES 74
D++D DG D + KLK +K KGRGF ++ +R + +E+
Sbjct: 3 DVLDLDGGEDFEVDEEGDQSVQKLKER-----ARKRKGRGF----GADGTAREDIQEYEA 53
Query: 75 LGTDGG--PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKG 132
+ TD PGPQRS+EGWI+ VTGVHEEAQEDD+ F EYGEI+NLHLNLDRRTGF+KG
Sbjct: 54 MDTDENDEPGPQRSVEGWILYVTGVHEEAQEDDIYEKFAEYGEIKNLHLNLDRRTGFLKG 113
Query: 133 YALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPS 172
YAL+EYE F+EAQ AI A+NG ++L QT++VDW F GP+
Sbjct: 114 YALVEYETFKEAQAAIDALNGAKILDQTISVDWCFVKGPT 153
>gi|449682653|ref|XP_002170706.2| PREDICTED: RNA-binding protein 8A-like [Hydra magnipapillata]
Length = 164
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 86/173 (49%), Positives = 115/173 (66%), Gaps = 22/173 (12%)
Query: 12 EDDDLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEADSERHSRLADRN 71
E D+ M++D D+ KLKS++ +K KGRGF+E D+ +
Sbjct: 11 EKDEFMEQDDDGDL----------SKLKSSV-----RKRKGRGFKESLDAR-----TNEP 50
Query: 72 FESLGTDGG--PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGF 129
FES+ D GPQ+S+EGWI+ VT VHEEAQEDD+ N+F EYG IRN+HLNLDRRTGF
Sbjct: 51 FESIDEDAPHIEGPQKSVEGWILFVTNVHEEAQEDDVHNMFREYGAIRNMHLNLDRRTGF 110
Query: 130 VKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMR 182
+KGYAL+EYE+F+EAQ+A+ A+NG +LL Q + VDWAF G +T K++ R
Sbjct: 111 LKGYALVEYESFKEAQSALEALNGEDLLGQKINVDWAFVKGGATKGNKKRGSR 163
>gi|196002047|ref|XP_002110891.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190586842|gb|EDV26895.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 170
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/142 (54%), Positives = 99/142 (69%), Gaps = 6/142 (4%)
Query: 46 APKKTKGRGFREEADSERHSRLADRNFESLGTDG--GPGPQRSIEGWIILVTGVHEEAQE 103
+ KK KGRGF+++ + + S L +ES+ DG GPQRS+EGWI+ V +HEEAQE
Sbjct: 31 SAKKRKGRGFQDDGEEAKGSNL---QYESMDVDGDYATGPQRSVEGWIVFVANIHEEAQE 87
Query: 104 DDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTV 163
DD+ F EYG+++NLHLNLDRRTGF+KGYAL+E+E +EAQ AI +NG LL QT+ V
Sbjct: 88 DDVYEKFAEYGDVKNLHLNLDRRTGFIKGYALVEFETKKEAQAAIDNLNGTNLLEQTIKV 147
Query: 164 DWAFSNGPSTGPFKRKNMRPGR 185
DW F GP T KR N R GR
Sbjct: 148 DWCFVKGPQTSGLKR-NDRDGR 168
>gi|242037677|ref|XP_002466233.1| hypothetical protein SORBIDRAFT_01g004010 [Sorghum bicolor]
gi|241920087|gb|EER93231.1| hypothetical protein SORBIDRAFT_01g004010 [Sorghum bicolor]
Length = 197
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 117/173 (67%), Gaps = 21/173 (12%)
Query: 5 EVDALDFE--DDDLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGR--GFREEAD 60
+V+ +D++ D+D M+EDG A + P P++ S A +T+GR G
Sbjct: 14 DVEFVDYDQDDEDAMEEDGRA------ARALPVPRIVSP----AVVRTRGRFAGRSPSVL 63
Query: 61 SERHSRLADRNFESLGTDG--GPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRN 118
+ H R F+S+ DG GPGPQRSIEGW ILV+G+ E+A+EDD N F E+G +++
Sbjct: 64 TSSHYR-----FDSITNDGDHGPGPQRSIEGWTILVSGIKEDAEEDDFYNAFSEFGHVKD 118
Query: 119 LHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
LHLNL+RRTG+ KGYALIEYE+FEEAQ AI AMNG +LLT+T+ VDWAFS GP
Sbjct: 119 LHLNLERRTGYAKGYALIEYESFEEAQAAIRAMNGSQLLTKTIYVDWAFSRGP 171
>gi|57863798|gb|AAS90636.2| unknown protein [Oryza sativa Japonica Group]
Length = 106
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/102 (71%), Positives = 87/102 (85%), Gaps = 4/102 (3%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
+IEGWI+LVTGVHEEAQEDDL N+F ++G+++NLHLNLDRRTGFVKGYALIEYE FEEAQ
Sbjct: 9 AIEGWIVLVTGVHEEAQEDDLHNIFRDFGQVKNLHLNLDRRTGFVKGYALIEYETFEEAQ 68
Query: 146 NAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTH 187
AI A++G ELLTQ ++VDWAFSN GP KR+N+R R H
Sbjct: 69 AAIKALDGTELLTQIISVDWAFSN----GPVKRRNIRKSRNH 106
>gi|242057399|ref|XP_002457845.1| hypothetical protein SORBIDRAFT_03g015351 [Sorghum bicolor]
gi|241929820|gb|EES02965.1| hypothetical protein SORBIDRAFT_03g015351 [Sorghum bicolor]
Length = 195
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/115 (70%), Positives = 95/115 (82%), Gaps = 10/115 (8%)
Query: 83 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFE 142
PQ SIEGWIILVTG+HEEAQEDDL N F E+G+++NLHLNLDRRTGFVKGYAL+EYE+F+
Sbjct: 90 PQ-SIEGWIILVTGIHEEAQEDDLHNAFREFGQVKNLHLNLDRRTGFVKGYALVEYESFD 148
Query: 143 EAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSP-RRRY 196
EAQ AI AM+G EL+TQ + VDWAF S+GP KR+N+R RSRSP RRRY
Sbjct: 149 EAQAAIKAMDGTELVTQIINVDWAF----SSGPVKRRNVR----WRSRSPVRRRY 195
>gi|222630141|gb|EEE62273.1| hypothetical protein OsJ_17060 [Oryza sativa Japonica Group]
Length = 190
Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/147 (56%), Positives = 107/147 (72%), Gaps = 17/147 (11%)
Query: 48 KKTKGRGFREEADSERHSRLAD----RNFESLGTDGGPGPQRSIE--------GWIILVT 95
+KTKGRGFR++A + R SRLA +F+SLG+DGGPGP R ++ +
Sbjct: 40 RKTKGRGFRDDA-APRDSRLAGAGRASDFDSLGSDGGPGPVRYLDLAKRDKNVDFYTPSL 98
Query: 96 GVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGE 155
G ++ QEDDL N+F ++G+++NLHLNLDRRTGFVKGYALIEYE FEEAQ AI A++G E
Sbjct: 99 GFMKKVQEDDLHNIFRDFGQVKNLHLNLDRRTGFVKGYALIEYETFEEAQAAIKALDGTE 158
Query: 156 LLTQTLTVDWAFSNGPSTGPFKRKNMR 182
LLTQ ++VDWAFSN GP KR+N+R
Sbjct: 159 LLTQIISVDWAFSN----GPVKRRNIR 181
>gi|405962751|gb|EKC28400.1| RNA-binding protein 8A [Crassostrea gigas]
Length = 563
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/123 (60%), Positives = 90/123 (73%), Gaps = 2/123 (1%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFG 111
GRGF AD S + D + +GGPGPQRS+EGWI+ VTGVHEEAQEDD+ + F
Sbjct: 36 GRGFG--ADGSTRSGVEDYEAMDVDEEGGPGPQRSVEGWILFVTGVHEEAQEDDVHDKFA 93
Query: 112 EYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
+YG I+NLHLNLDRRTGF+KGYAL+EYE F+EAQ A+ A+NG E+L Q + VDW F GP
Sbjct: 94 DYGTIKNLHLNLDRRTGFLKGYALVEYETFKEAQAAMDALNGSEILGQKINVDWCFVRGP 153
Query: 172 STG 174
G
Sbjct: 154 RKG 156
>gi|307102477|gb|EFN50751.1| hypothetical protein CHLNCDRAFT_33380 [Chlorella variabilis]
Length = 139
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 97/128 (75%), Gaps = 3/128 (2%)
Query: 45 GAPKKTKGRGFREEADSERHSRLADRNFESLGTD-GGPGPQRSIEGWIILVTGVHEEAQE 103
G +K KGRGFRE + E RL FE+L +D GPGP +S+EGW++LVTGVHEEAQE
Sbjct: 8 GGARKQKGRGFREPMELE--DRLQGGQFEALPSDKAGPGPAKSVEGWVVLVTGVHEEAQE 65
Query: 104 DDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTV 163
+D+ + F E+G+++N+++NLDRRTGFVKGYAL+EY +EAQ AI M G ELLTQ + V
Sbjct: 66 EDVHDAFAEFGDVKNIYMNLDRRTGFVKGYALVEYGTKQEAQAAIEEMEGKELLTQIVHV 125
Query: 164 DWAFSNGP 171
WAFS+GP
Sbjct: 126 TWAFSSGP 133
>gi|346466943|gb|AEO33316.1| hypothetical protein [Amblyomma maculatum]
Length = 175
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/135 (56%), Positives = 95/135 (70%), Gaps = 4/135 (2%)
Query: 42 ITGGAPKKTKGRGFREEAD--SERHSRLADRNFESLGTDGG--PGPQRSIEGWIILVTGV 97
+ GGAP+ R E SE +R + +E++ D PGPQRS+EGWI+ VTGV
Sbjct: 23 LVGGAPRLLLERSTLERCGFGSEGTAREEIKEYEAMDVDENDEPGPQRSVEGWILFVTGV 82
Query: 98 HEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELL 157
HEEAQEDD+ F EYGEI+NLHLNLDRRTGF+KGYAL+EYE F+EAQ AI A+NG ++L
Sbjct: 83 HEEAQEDDIYEKFAEYGEIKNLHLNLDRRTGFLKGYALVEYETFKEAQAAIDALNGAKIL 142
Query: 158 TQTLTVDWAFSNGPS 172
Q + VDW F GP+
Sbjct: 143 DQVINVDWCFVKGPT 157
>gi|242015830|ref|XP_002428550.1| RNA-binding protein 8A, putative [Pediculus humanus corporis]
gi|212513184|gb|EEB15812.1| RNA-binding protein 8A, putative [Pediculus humanus corporis]
Length = 160
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 94/127 (74%), Gaps = 7/127 (5%)
Query: 48 KKTKGRGFREEADSERHSRLADRNFESLGTDGG---PGPQRSIEGWIILVTGVHEEAQED 104
KK KGRGF SE +R +++ES+ DGG PGPQRS+EGWI+ VT +HEEAQED
Sbjct: 23 KKRKGRGF----GSENSAREDIQDYESMDLDGGGEEPGPQRSVEGWILFVTSIHEEAQED 78
Query: 105 DLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVD 164
D+ F E+GEI+NLHLNLDRRTG++KGYAL+EYE +EEA A A+NG ++L Q + VD
Sbjct: 79 DIHETFSEHGEIKNLHLNLDRRTGYLKGYALVEYETYEEALQAKEALNGAKILDQQIGVD 138
Query: 165 WAFSNGP 171
W F+ GP
Sbjct: 139 WCFAKGP 145
>gi|340378166|ref|XP_003387599.1| PREDICTED: RNA-binding protein 8A-like [Amphimedon queenslandica]
Length = 154
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/134 (56%), Positives = 96/134 (71%), Gaps = 7/134 (5%)
Query: 46 APKKTKGRGFREEADSER-HSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQED 104
+ K KGRGF D +R + +L +ES+ + GPGP RSIEGWI+ VTGV+EEAQED
Sbjct: 21 SAKVRKGRGF---GDKDRDYEKL---QYESIDSSEGPGPMRSIEGWILFVTGVNEEAQED 74
Query: 105 DLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVD 164
+L + F EYGE++N+H+NLDRRTGF+KGY L+EYE + EAQ AI A+NG E L Q L VD
Sbjct: 75 ELMDKFAEYGEVKNMHVNLDRRTGFLKGYTLVEYETYREAQQAINALNGAEFLGQMLKVD 134
Query: 165 WAFSNGPSTGPFKR 178
WAF P TG +R
Sbjct: 135 WAFIKHPKTGVGRR 148
>gi|115456121|ref|NP_001051661.1| Os03g0809900 [Oryza sativa Japonica Group]
gi|50540745|gb|AAT77901.1| putative RNA binding motif protein [Oryza sativa Japonica Group]
gi|108711686|gb|ABF99481.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550132|dbj|BAF13575.1| Os03g0809900 [Oryza sativa Japonica Group]
Length = 197
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/131 (59%), Positives = 96/131 (73%), Gaps = 16/131 (12%)
Query: 72 FESLGTDGGPG--PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGF 129
F+SL G PG PQRSIEGWI+LV+GV E+A+EDDL N F ++G +++LHLNL+RRTG+
Sbjct: 70 FDSLADAGNPGHGPQRSIEGWILLVSGVKEDAEEDDLYNTFSDFGHVKDLHLNLERRTGY 129
Query: 130 VKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP-----STGPFKRKNMRPG 184
KGYAL+EYE+FEEAQ AI AMNG +LLT+T+ VDWAFS GP ST P R
Sbjct: 130 AKGYALVEYESFEEAQTAIKAMNGTQLLTRTVYVDWAFSRGPIQKLTSTRPLHR------ 183
Query: 185 RTHRSRSPRRR 195
RSR+P RR
Sbjct: 184 ---RSRTPPRR 191
>gi|51854397|gb|AAU10777.1| unknown protein [Oryza sativa Japonica Group]
Length = 116
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 71/97 (73%), Positives = 85/97 (87%), Gaps = 4/97 (4%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
+IEGWI+LVTGVHEEAQEDDL N+F ++G+++NLHLNLDRRTGFVKGYALIEYE FEEAQ
Sbjct: 9 AIEGWIVLVTGVHEEAQEDDLHNIFRDFGQVKNLHLNLDRRTGFVKGYALIEYETFEEAQ 68
Query: 146 NAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMR 182
AI A++G ELLTQ ++VDWAFSNGP KR+N+R
Sbjct: 69 AAIKALDGTELLTQIISVDWAFSNGPV----KRRNIR 101
>gi|198436338|ref|XP_002129738.1| PREDICTED: similar to RNA binding motif protein 8 [Ciona
intestinalis]
Length = 164
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 95/127 (74%), Gaps = 4/127 (3%)
Query: 47 PKKTKGRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDL 106
K+ KGRG + +++ R + +++ + D G GPQRS+EGWI+ VTG+HEEA+E+DL
Sbjct: 29 AKRRKGRGLGDASNAHRE----EMDYDIMEVDDGVGPQRSVEGWILFVTGIHEEAKEEDL 84
Query: 107 QNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ FGEYGE++NLHLNLDRRTG++KGYAL+EYE ++EAQ A+ AMNG +L + L VDWA
Sbjct: 85 YDAFGEYGELKNLHLNLDRRTGYIKGYALVEYETYKEAQAALDAMNGYDLYNEKLAVDWA 144
Query: 167 FSNGPST 173
F P+
Sbjct: 145 FVKPPAA 151
>gi|301072399|gb|ADK56161.1| RNA-binding protein [Helicoverpa armigera]
Length = 166
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 115/180 (63%), Gaps = 21/180 (11%)
Query: 6 VDALDFEDDDL--MDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEADSER 63
D LD E+ + +DEDG + +LK +K KGRGF E S
Sbjct: 2 ADVLDIENSEEFEVDEDGEQGI----------ARLKEK-----ARKRKGRGFGSETGSGG 46
Query: 64 HSRLADRN-FESLGTDG---GPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNL 119
S +R ++SL +G PGPQRS+EGWI+ V+ VHEEAQE+D+QN F E+GEI+N+
Sbjct: 47 ASERGNRGRYDSLAPEGDGNTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNI 106
Query: 120 HLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRK 179
HLNLDRRTGF+KGYAL+EYE +++A +A A++G ++L Q ++VDW F GP+ G KR+
Sbjct: 107 HLNLDRRTGFLKGYALVEYETYKQAASAREALDGADILGQPISVDWCFVKGPTKGHKKRR 166
>gi|112982916|ref|NP_001037578.1| RNA binding motif protein Y14 [Bombyx mori]
gi|95102578|gb|ABF51227.1| RNA binding motif protein [Bombyx mori]
gi|95115210|gb|ABF55971.1| Tsu [Bombyx mori]
gi|221579722|gb|ACM24353.1| RNA-binding motif protein Y14 [Bombyx mori]
Length = 166
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 114/180 (63%), Gaps = 21/180 (11%)
Query: 6 VDALDFEDDDL--MDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEADSER 63
D LD E+ + +DEDG + +LK +K KGRGF EA
Sbjct: 2 ADVLDIENSEEFEVDEDGEQGI----------ARLKEK-----ARKRKGRGFGNEAGGGS 46
Query: 64 HSRLADRN-FESL---GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNL 119
+ +R ++SL G G PGPQRS+EGWI+ V+ VHEEAQE+D+QN F E+GEI+N+
Sbjct: 47 AAERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNI 106
Query: 120 HLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRK 179
HLNLDRRTGF+KGYAL+EYE +++A +A A++G ++L Q ++VDW F GP+ KR+
Sbjct: 107 HLNLDRRTGFLKGYALVEYETYKQAASAREALDGADILGQAISVDWCFVKGPTKSHKKRR 166
>gi|260797536|ref|XP_002593758.1| hypothetical protein BRAFLDRAFT_251578 [Branchiostoma floridae]
gi|229278987|gb|EEN49769.1| hypothetical protein BRAFLDRAFT_251578 [Branchiostoma floridae]
Length = 173
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/121 (61%), Positives = 95/121 (78%), Gaps = 4/121 (3%)
Query: 48 KKTKGRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDL 106
+K KGRGF + D+ R R ++ ++ES+ D PGPQRS+EGWI+ VTGVHEEAQEDD+
Sbjct: 32 RKRKGRGF--DGDAPR-GRESEEHYESVEADSDQPGPQRSVEGWILFVTGVHEEAQEDDI 88
Query: 107 QNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ F E+GEI+NLHLNLDRRTGF+KGYAL+EYE F+EAQ A+ A+NG E+L T+ VDW
Sbjct: 89 YDKFAEFGEIKNLHLNLDRRTGFLKGYALVEYETFKEAQAAMDALNGTEILENTIHVDWC 148
Query: 167 F 167
F
Sbjct: 149 F 149
>gi|303279743|ref|XP_003059164.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459000|gb|EEH56296.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 150
Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/131 (61%), Positives = 93/131 (70%), Gaps = 7/131 (5%)
Query: 45 GAPKK----TKGRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEE 100
GAP K TKGRG +D E H+ A + E GPGP +SIEGWIIL+T VHEE
Sbjct: 19 GAPSKDGRATKGRGHAAASDRE-HASGAYDSLEPASL--GPGPAKSIEGWIILITNVHEE 75
Query: 101 AQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQT 160
AQEDD+ F ++GEI+NLHLNLDRRTGFVKGYAL+EYE +EAQ AI AMNG E+L Q
Sbjct: 76 AQEDDIHEHFADFGEIKNLHLNLDRRTGFVKGYALVEYETKKEAQAAIDAMNGAEMLGQN 135
Query: 161 LTVDWAFSNGP 171
L V +AFS GP
Sbjct: 136 LGVAFAFSKGP 146
>gi|390345709|ref|XP_787527.3| PREDICTED: RNA-binding protein 8A-like [Strongylocentrotus
purpuratus]
Length = 168
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 114/178 (64%), Gaps = 16/178 (8%)
Query: 7 DALDFEDDDLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEADSERHSR 66
D LD + +ED VD S KL+ ++ KK KGRGF +E R
Sbjct: 3 DVLDIHE---AEEDEEFQVDEESDQNIQ--KLRQSV-----KKRKGRGF----GAEGGIR 48
Query: 67 LADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDR 125
AD F+ L D GPQRS+EGWI+ VTGVHEEA E+D+++ F +YGEI+N H+NLDR
Sbjct: 49 TADEEFQGLEIDTSESGPQRSVEGWILFVTGVHEEATEEDVRDKFADYGEIKNTHVNLDR 108
Query: 126 RTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP-STGPFKRKNMR 182
RTG++KGY L+E+E F+EAQ A+ A+NG ++L QT+ VDWAF GP TG K+++ R
Sbjct: 109 RTGYLKGYVLVEFETFKEAQKAMDALNGEDILGQTINVDWAFVRGPHETGSSKKRSGR 166
>gi|226509748|ref|NP_001150263.1| RNA-binding protein 8A [Zea mays]
gi|195637920|gb|ACG38428.1| RNA-binding protein 8A [Zea mays]
gi|414873552|tpg|DAA52109.1| TPA: RNA-binding protein 8A [Zea mays]
Length = 196
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 111/171 (64%), Gaps = 13/171 (7%)
Query: 3 NAEVDALDFEDDDLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEADSE 62
+ E D +D+D M+EDG A + P P++ S A +T+GR F + S
Sbjct: 10 DVEFADYDLDDEDAMEEDGRA------ARALPVPRIVSP----AVVRTRGR-FVGRSPSV 58
Query: 63 RHSRLADRNFESLGTDGGPGP--QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLH 120
S +F + D GP P QRSIEGW ILV+GV ++A+EDDL N F ++G +++LH
Sbjct: 59 LTSSRYRFDFTTNNGDHGPIPLPQRSIEGWAILVSGVKDDAEEDDLYNAFSDFGHVKDLH 118
Query: 121 LNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
LNL+RRTG+ KGYALIEYENFEEAQ AI AMNG +L T+T+ VDWAFS GP
Sbjct: 119 LNLERRTGYAKGYALIEYENFEEAQAAIRAMNGSQLFTKTINVDWAFSRGP 169
>gi|156553815|ref|XP_001604863.1| PREDICTED: RNA-binding protein 8A-like [Nasonia vitripennis]
Length = 165
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/171 (46%), Positives = 102/171 (59%), Gaps = 10/171 (5%)
Query: 15 DLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEADSERHSRLADRNFES 74
D++D D + + +LK KK KGRG E S R +
Sbjct: 3 DVLDIDNAEEFEVDEEGDQGIARLKEK-----AKKRKGRGHGAELVSTRDDVGHYESMHV 57
Query: 75 LGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYA 134
+ D PGPQRS+EGWI+ +T VHEEAQEDD+ + F E+G+I+NLHLNLDRRTGF+KGYA
Sbjct: 58 VEDDNEPGPQRSVEGWILFITSVHEEAQEDDIHDKFSEFGQIKNLHLNLDRRTGFLKGYA 117
Query: 135 LIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGR 185
L+EYE F+EAQ A A+NG E+L Q + VDW F GP K+ R GR
Sbjct: 118 LVEYETFKEAQAAKDALNGSEILGQAVGVDWCFVKGP-----KKLKKRSGR 163
>gi|307190290|gb|EFN74382.1| RNA-binding protein 8A [Camponotus floridanus]
Length = 166
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 109/180 (60%), Gaps = 20/180 (11%)
Query: 15 DLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEADSERHSRLADRNFES 74
D++D D + + +LK K+ KGRG E S R ++ES
Sbjct: 3 DVLDIDNAEEFEVDDEGDQGIARLKEK-----AKRRKGRGHGAELVSTRDDV---GHYES 54
Query: 75 LGT----DGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFV 130
+ D PGPQRS+EGWI+ + VHEEAQEDD+Q+ F E+G+I+NLHLNLDRRTGF+
Sbjct: 55 MNVVEEDDNEPGPQRSVEGWILFINSVHEEAQEDDIQDKFSEFGQIKNLHLNLDRRTGFL 114
Query: 131 KGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSR 190
KGYAL+EYE F+EAQ A A+NG E+L Q ++VDW F GP K +R R+HR R
Sbjct: 115 KGYALVEYETFKEAQAAKEALNGTEILGQAISVDWCFVKGP-------KKIRK-RSHRRR 166
>gi|409041027|gb|EKM50513.1| hypothetical protein PHACADRAFT_152568 [Phanerochaete carnosa
HHB-10118-sp]
Length = 165
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 102/154 (66%), Gaps = 5/154 (3%)
Query: 44 GGAPKKTKGRGFREEADSERHSRLADRNFESLGTDGGPGPQ--RSIEGWIILVTGVHEEA 101
GGA ++ KGRGF+ A + ++F+ + + G + RS+EGWI+LVTGVHEEA
Sbjct: 14 GGAVRR-KGRGFQSSAGGNESGIASQQSFDRVESSHGSETRAARSVEGWIVLVTGVHEEA 72
Query: 102 QEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTL 161
E+DL + FGEYGEI+NLH+NLDRRTG+VKGYAL+EYE EAQ AI +G LL QTL
Sbjct: 73 TEEDLTDKFGEYGEIKNLHMNLDRRTGYVKGYALVEYETMAEAQAAIDGASGTALLEQTL 132
Query: 162 TVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
D+AF P GP +K R GR + PRRR
Sbjct: 133 QCDYAFVRPPPAGP--KKGRREGRGRSASPPRRR 164
>gi|356546414|ref|XP_003541621.1| PREDICTED: uncharacterized protein LOC100804377 [Glycine max]
Length = 199
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 97/136 (71%), Gaps = 9/136 (6%)
Query: 4 AEVDALDFE--DDDLMDEDGTADVDASSSPRAPQPKLKSAITGG-APKKTKGRGFREEAD 60
+++ALDFE DDDLMDE+G D + S PQPKLK T APKKTKG FR++ D
Sbjct: 70 VDIEALDFEPEDDDLMDEEGAPDAETS----LPQPKLKFTFTAVVAPKKTKGCEFRQDTD 125
Query: 61 SERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLH 120
+ +RL+D + SL +GG GPQRS +GWIILV VHEEAQ +DLQN FGEYGEI+NLH
Sbjct: 126 ASCDTRLSDSD--SLTIEGGLGPQRSTKGWIILVIDVHEEAQANDLQNAFGEYGEIKNLH 183
Query: 121 LNLDRRTGFVKGYALI 136
LNLDRR FVKG ++
Sbjct: 184 LNLDRRIVFVKGAVIM 199
>gi|49617277|gb|AAT67403.1| RNA binding motif protein 8B [Equus caballus]
Length = 133
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/128 (54%), Positives = 92/128 (71%), Gaps = 5/128 (3%)
Query: 48 KKTKGRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDL 106
KK KGRGF E R +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+
Sbjct: 5 KKRKGRGFGSEGSRARKRE----DYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDI 60
Query: 107 QNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ F EYGEI+N+HLNLDRRTG++KGY L+EYE ++EAQ A+ +NG +L+ Q ++VDW
Sbjct: 61 HDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWC 120
Query: 167 FSNGPSTG 174
F GP G
Sbjct: 121 FVRGPPKG 128
>gi|332019400|gb|EGI59886.1| RNA-binding protein 8A [Acromyrmex echinatior]
Length = 157
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 91/128 (71%), Gaps = 7/128 (5%)
Query: 48 KKTKGRGFREEADSERHSRLADRNFESLGT----DGGPGPQRSIEGWIILVTGVHEEAQE 103
KK KGRG E S R ++ES+ D PGPQRS+EGWI+ + VHEEAQE
Sbjct: 31 KKRKGRGHGAELVSTRDDV---GHYESMNLIEEDDNEPGPQRSVEGWILFINSVHEEAQE 87
Query: 104 DDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTV 163
DD+Q+ F E+G+I+NLHLNLDRRTGF+KGYAL+EYE F+EAQ A A+NG E+L Q ++V
Sbjct: 88 DDIQDKFSEFGQIKNLHLNLDRRTGFLKGYALVEYETFKEAQAAKEALNGTEILGQAISV 147
Query: 164 DWAFSNGP 171
DW F GP
Sbjct: 148 DWCFVKGP 155
>gi|66558056|ref|XP_395245.2| PREDICTED: RNA-binding protein 8A [Apis mellifera]
gi|380027468|ref|XP_003697445.1| PREDICTED: RNA-binding protein 8A-like [Apis florea]
Length = 166
Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/147 (52%), Positives = 99/147 (67%), Gaps = 15/147 (10%)
Query: 48 KKTKGRGFREEADSERHSRLADRNFESLGT----DGGPGPQRSIEGWIILVTGVHEEAQE 103
K+ KGRG E S R ++ES+ D PGPQRS+EGWI+ + VHEEAQE
Sbjct: 31 KRRKGRGHGAELVSTRDDV---GHYESMNVVEEDDDEPGPQRSVEGWILFINSVHEEAQE 87
Query: 104 DDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTV 163
DD+Q+ F E+G+I+NLHLNLDRRTGF+KGYAL+EYE F+EAQ A A+NG E+L Q ++V
Sbjct: 88 DDIQDKFSEFGQIKNLHLNLDRRTGFLKGYALVEYETFKEAQAAKDALNGTEILGQPISV 147
Query: 164 DWAFSNGPSTGPFKRKNMRPGRTHRSR 190
DW F GP K ++ R+HR R
Sbjct: 148 DWCFVKGP-------KKIKK-RSHRRR 166
>gi|307197074|gb|EFN78442.1| RNA-binding protein 8A [Harpegnathos saltator]
Length = 157
Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 101/161 (62%), Gaps = 12/161 (7%)
Query: 15 DLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEADSERHSRLADRNFES 74
D++D D + + +LK K+ KGRG E S R ++ES
Sbjct: 3 DVLDIDNAEEFEVDDEGDQGIARLKEK-----AKRRKGRGHGAELISTRDDV---GHYES 54
Query: 75 LGT----DGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFV 130
+ D PGPQRS+EGWI+ + VHEEAQEDD+Q+ F E+G+I+NLHLNLDRRTGF+
Sbjct: 55 MNIVEEDDNEPGPQRSVEGWILFINSVHEEAQEDDIQDKFSEFGQIKNLHLNLDRRTGFL 114
Query: 131 KGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
KGYAL+EYE F+EAQ A A+NG E+L Q ++VDW F GP
Sbjct: 115 KGYALVEYETFKEAQAAKEALNGTEILGQAISVDWCFVKGP 155
>gi|340709557|ref|XP_003393372.1| PREDICTED: RNA-binding protein 8A-like [Bombus terrestris]
gi|350401131|ref|XP_003486057.1| PREDICTED: RNA-binding protein 8A-like [Bombus impatiens]
gi|383852814|ref|XP_003701920.1| PREDICTED: RNA-binding protein 8A-like [Megachile rotundata]
Length = 166
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/147 (52%), Positives = 99/147 (67%), Gaps = 15/147 (10%)
Query: 48 KKTKGRGFREEADSERHSRLADRNFESLGT----DGGPGPQRSIEGWIILVTGVHEEAQE 103
K+ KGRG E S R ++ES+ D PGPQRS+EGWI+ + VHEEAQE
Sbjct: 31 KRRKGRGHGAELVSTRDDV---GHYESMNIVEEDDDEPGPQRSVEGWILFINSVHEEAQE 87
Query: 104 DDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTV 163
DD+Q+ F E+G+I+NLHLNLDRRTGF+KGYAL+EYE F+EAQ A A+NG E+L Q ++V
Sbjct: 88 DDIQDKFSEFGQIKNLHLNLDRRTGFLKGYALVEYETFKEAQAAKDALNGTEILGQPISV 147
Query: 164 DWAFSNGPSTGPFKRKNMRPGRTHRSR 190
DW F GP K ++ R+HR R
Sbjct: 148 DWCFVKGP-------KKIKK-RSHRRR 166
>gi|390600046|gb|EIN09441.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 165
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 100/156 (64%), Gaps = 9/156 (5%)
Query: 43 TGGAPKKTKGRGFREEADSERHSRLADRNFESLGTDGGPGPQ--RSIEGWIILVTGVHEE 100
TGG + KGRGF+ + + D ++ + + G + RS+EGWI+LVTGVHEE
Sbjct: 13 TGGGAVRRKGRGFKTTSGGDEVVSSKDVTYDRVESKEGTDTRAARSVEGWIVLVTGVHEE 72
Query: 101 AQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQT 160
A E+D+ + F EYGEI+NLHLNLDRRTG+VKGYAL+EYE EAQ AI +G +LL QT
Sbjct: 73 ATEEDVMDRFSEYGEIKNLHLNLDRRTGYVKGYALVEYETMAEAQAAIDGASGSQLLEQT 132
Query: 161 LTVDWAFSNGPSTGPFKRKNMRPGRTH-RSRSPRRR 195
L D+AF P TGP K GR RS SP RR
Sbjct: 133 LQCDYAFVRPPPTGPKK------GRARGRSASPSRR 162
>gi|290462697|gb|ADD24396.1| RNA-binding protein 8A [Lepeophtheirus salmonis]
Length = 161
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/132 (51%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
Query: 48 KKTKGRGFREEADSERHSRLA-DRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDL 106
K+ KGRGF + A+ + + A DR + D PQRS+EGWI+ VTG+HEEAQEDD+
Sbjct: 30 KRRKGRGFDDFAEPRKSTGSAFDRLDTTTSVDSASAPQRSVEGWILFVTGIHEEAQEDDI 89
Query: 107 QNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ F ++GEI+N+HLNLDRRTGF+KGYAL+E+E ++EA +A +++G +LL Q +TVDWA
Sbjct: 90 HDSFSDFGEIKNVHLNLDRRTGFLKGYALVEFETYKEALSAKESLDGSDLLGQKITVDWA 149
Query: 167 FSNGPSTGPFKR 178
F GP +R
Sbjct: 150 FVKGPKKSSRRR 161
>gi|240247649|emb|CAX51419.1| putative RNA binding protein [Opisthacanthus cayaporum]
Length = 220
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 78/91 (85%)
Query: 81 PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYEN 140
PGPQRS+EGWI+ +TGVHEE+QEDD+ + F E+GEI+N+HLNLDRRTGF+KGYAL+EYE
Sbjct: 62 PGPQRSVEGWILFITGVHEESQEDDIYDKFAEFGEIKNIHLNLDRRTGFLKGYALVEYET 121
Query: 141 FEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
F EAQ A+ A+NG E+L Q ++VDWAF GP
Sbjct: 122 FYEAQAAMEALNGSEILGQNISVDWAFVKGP 152
>gi|307209538|gb|EFN86470.1| RNA-binding protein 8A [Harpegnathos saltator]
Length = 157
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 91/128 (71%), Gaps = 7/128 (5%)
Query: 48 KKTKGRGFREEADSERHSRLADRNFESLGT----DGGPGPQRSIEGWIILVTGVHEEAQE 103
K+ KGRG E S + ++ES+ D PGPQRS+EGWI+ + VHEEAQE
Sbjct: 31 KRRKGRGHGAELISTKDDV---GHYESMNIVEEDDNEPGPQRSVEGWILFINSVHEEAQE 87
Query: 104 DDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTV 163
DD+Q+ F E+G+I+NLHLNLDRRTGF+KGYAL+EYE F+EAQ A A+NG E+L Q ++V
Sbjct: 88 DDIQDKFSEFGQIKNLHLNLDRRTGFLKGYALVEYETFKEAQAAKEALNGTEILGQAISV 147
Query: 164 DWAFSNGP 171
DW F GP
Sbjct: 148 DWCFVKGP 155
>gi|387914470|gb|AFK10844.1| RNA-binding protein 8A [Callorhinchus milii]
gi|392878750|gb|AFM88207.1| RNA-binding protein 8A [Callorhinchus milii]
gi|392879020|gb|AFM88342.1| RNA-binding protein 8A [Callorhinchus milii]
gi|392879168|gb|AFM88416.1| RNA-binding protein 8A [Callorhinchus milii]
gi|392881148|gb|AFM89406.1| RNA-binding protein 8A [Callorhinchus milii]
gi|392881470|gb|AFM89567.1| RNA-binding protein 8A [Callorhinchus milii]
Length = 177
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/145 (53%), Positives = 105/145 (72%), Gaps = 7/145 (4%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF AD SR+ + +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFGS-ADEGARSRVRE-DYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDVHDRF 94
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
E+GEI+N++LNLDRRTG++KGYAL+EYE ++EAQ A+ +NG EL Q ++VDW F G
Sbjct: 95 AEFGEIKNINLNLDRRTGYLKGYALVEYETYKEAQAAMEGLNGTELAGQQISVDWGFVRG 154
Query: 171 PSTGPFKRKNMRPGRTHRSRSPRRR 195
P P +++ R G RSRSP R+
Sbjct: 155 P---PKSKRSSRLGH-RRSRSPDRK 175
>gi|312385484|gb|EFR29970.1| hypothetical protein AND_00716 [Anopheles darlingi]
Length = 165
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 97/148 (65%), Gaps = 20/148 (13%)
Query: 51 KGRGFREEA---DSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQ 107
KGRGF E+ +S + RL D E+ PGPQRS+EGWI+ VT +HEEAQEDD+Q
Sbjct: 34 KGRGFGNESIPRESIDYERLQDDEEEA-----EPGPQRSVEGWILFVTSIHEEAQEDDIQ 88
Query: 108 NVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
F E+G+I+N+HLNLDRRTGF+KGYAL+EYE +++A A A+NG E+L QT+ VDW F
Sbjct: 89 EKFCEFGDIKNIHLNLDRRTGFLKGYALVEYETYKQAMAAKEALNGSEILGQTIAVDWCF 148
Query: 168 SNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
GP + +S S RRR
Sbjct: 149 VKGPK------------KLKKSSSERRR 164
>gi|170042888|ref|XP_001849141.1| RNA-binding protein 8A [Culex quinquefasciatus]
gi|167866315|gb|EDS29698.1| RNA-binding protein 8A [Culex quinquefasciatus]
Length = 164
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 93/128 (72%), Gaps = 8/128 (6%)
Query: 48 KKTKGRGFREEA---DSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQED 104
+K KGRGF E+ ++ + RL D E+ PGPQRS+EGWI+ VT +HEEAQED
Sbjct: 31 RKRKGRGFGNESIPREAIDYERLQDDEEEA-----EPGPQRSVEGWILFVTSIHEEAQED 85
Query: 105 DLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVD 164
D+ + F ++G+I+N+HLNLDRRTGF+KGYAL+EYE +++A A A+NG E+LTQT+ VD
Sbjct: 86 DIHDKFCDFGDIKNIHLNLDRRTGFLKGYALVEYETYKQALAAKEALNGSEILTQTIAVD 145
Query: 165 WAFSNGPS 172
W F GP
Sbjct: 146 WCFVKGPK 153
>gi|118787932|ref|XP_316392.3| AGAP006365-PA [Anopheles gambiae str. PEST]
gi|116127037|gb|EAA11513.3| AGAP006365-PA [Anopheles gambiae str. PEST]
Length = 164
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/128 (54%), Positives = 92/128 (71%), Gaps = 8/128 (6%)
Query: 48 KKTKGRGFREEA---DSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQED 104
+K KGRGF E+ ++ + RL D E+ PGPQRS+EGWI+ VT +HEEAQED
Sbjct: 31 RKRKGRGFGNESIPRETIDYERLQDDEEEA-----EPGPQRSVEGWILFVTAIHEEAQED 85
Query: 105 DLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVD 164
D+Q F E+G+I+N+HLNLDRRTGF+KGYAL+EYE +++A A A+NG E+L QT+ VD
Sbjct: 86 DIQEKFCEFGDIKNIHLNLDRRTGFLKGYALVEYETYKQALAAKEALNGSEVLGQTIAVD 145
Query: 165 WAFSNGPS 172
W F GP
Sbjct: 146 WCFVKGPK 153
>gi|259089490|ref|NP_001158544.1| RNA-binding protein 8A [Oncorhynchus mykiss]
gi|225704754|gb|ACO08223.1| RNA-binding protein 8A [Oncorhynchus mykiss]
Length = 182
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 108/172 (62%), Gaps = 23/172 (13%)
Query: 6 VDALDFED----DDLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEADS 61
D LD + D MDEDG + KLK K+ KGRGF E +
Sbjct: 2 ADVLDLHEAGGEDFAMDEDGDDSI----------HKLKEK-----AKRRKGRGFGSEEGA 46
Query: 62 ERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLH 120
R +++++ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F E+GEI+NLH
Sbjct: 47 RSRVR---EDYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEFGEIKNLH 103
Query: 121 LNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPS 172
LNLDRRTG++KGYAL+EYE ++EAQ A+ +NG +++ Q ++VDW F GP+
Sbjct: 104 LNLDRRTGYLKGYALVEYETYKEAQAAMEGLNGQDMMGQPISVDWGFVRGPT 155
>gi|392876910|gb|AFM87287.1| RNA-binding protein 8A [Callorhinchus milii]
Length = 176
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/145 (53%), Positives = 103/145 (71%), Gaps = 8/145 (5%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF AD SR+ + +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFGS-ADEGARSRVRE-DYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDVHDRF 94
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
E+GEI+N++LNLDRRTG++KGYAL+EYE ++EAQ A+ +NG EL Q ++VDW F G
Sbjct: 95 AEFGEIKNINLNLDRRTGYLKGYALVEYETYKEAQAAMEGLNGTELAGQQISVDWGFVRG 154
Query: 171 PSTGPFKRKNMRPGRTHRSRSPRRR 195
P K K R G RSRSP R+
Sbjct: 155 PP----KSKRSRLGHM-RSRSPDRK 174
>gi|358253577|dbj|GAA53451.1| RNA-binding protein 8A [Clonorchis sinensis]
Length = 712
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/132 (56%), Positives = 92/132 (69%), Gaps = 8/132 (6%)
Query: 46 APKKTKGRGFREEADSERHSRLADRNFESLGT---DGGPGPQRSIEGWIILVTGVHEEAQ 102
+ KK KGRGF E + FESL T GGPGPQRSIEGWI+ V VHEEA
Sbjct: 572 SAKKRKGRGFVGEITDT-----SKEGFESLRTAEDSGGPGPQRSIEGWIVFVRNVHEEAT 626
Query: 103 EDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLT 162
E+D+++ F EYG+I+NLHLNLDRRTG++KGYAL+EYE F+EAQ A+ ++G L QT+
Sbjct: 627 EEDIRDKFCEYGDIKNLHLNLDRRTGYLKGYALVEYELFKEAQTALEQLDGSVLHGQTIR 686
Query: 163 VDWAFSNGPSTG 174
VDWAF+ G G
Sbjct: 687 VDWAFTRGFIVG 698
>gi|213511036|ref|NP_001135168.1| RNA-binding protein 8A [Salmo salar]
gi|251764995|sp|B5DGI7.1|RBM8A_SALSA RecName: Full=RNA-binding protein 8A; AltName: Full=RNA-binding
motif protein 8A; AltName: Full=Ribonucleoprotein RBM8A
gi|197632275|gb|ACH70861.1| RNA binding motif protein 8A [Salmo salar]
gi|221220534|gb|ACM08928.1| RNA-binding protein 8A [Salmo salar]
gi|223672543|gb|ACN12453.1| RNA-binding protein 8A [Salmo salar]
Length = 175
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/171 (46%), Positives = 107/171 (62%), Gaps = 23/171 (13%)
Query: 6 VDALDFED----DDLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEADS 61
D LD + D MDEDG + KLK K+ KGRGF E +
Sbjct: 2 ADVLDLHEAGGEDFAMDEDGDDSI----------HKLKEK-----AKRRKGRGFGSEEGA 46
Query: 62 ERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLH 120
R +++++ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F E+GEI+NLH
Sbjct: 47 RSRVR---EDYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEFGEIKNLH 103
Query: 121 LNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
LNLDRRTG++KGYAL+EYE ++EAQ A+ +NG +++ Q ++VDW F GP
Sbjct: 104 LNLDRRTGYLKGYALVEYETYKEAQAAMEGLNGQDMMGQPISVDWGFVRGP 154
>gi|221221492|gb|ACM09407.1| RNA-binding protein 8A [Salmo salar]
gi|225705474|gb|ACO08583.1| RNA-binding protein 8A [Oncorhynchus mykiss]
Length = 173
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 93/125 (74%), Gaps = 4/125 (3%)
Query: 48 KKTKGRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDL 106
K+ KGRGF E + R +++++ DG PGPQRS+EGWI+ VTGVHEEA E+D+
Sbjct: 31 KRRKGRGFGSEEGARSRVR---EDYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDI 87
Query: 107 QNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ F E+GEI+NLHLNLDRRTG++KGYAL+EYE ++EAQ A+ +NG +++ Q ++VDW
Sbjct: 88 HDKFAEFGEIKNLHLNLDRRTGYLKGYALVEYETYKEAQAAMEGLNGQDMMGQPISVDWG 147
Query: 167 FSNGP 171
F GP
Sbjct: 148 FVRGP 152
>gi|255073543|ref|XP_002500446.1| predicted protein [Micromonas sp. RCC299]
gi|226515709|gb|ACO61704.1| predicted protein [Micromonas sp. RCC299]
Length = 113
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/102 (68%), Positives = 79/102 (77%), Gaps = 2/102 (1%)
Query: 72 FESL--GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGF 129
FES+ G PGP +S+EGWI+LVTGVHEEAQEDDL F +YGEIRN+HLNLDRRTGF
Sbjct: 9 FESIPENDSGAPGPAKSVEGWIVLVTGVHEEAQEDDLHEHFADYGEIRNMHLNLDRRTGF 68
Query: 130 VKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
VKGYALIEYE +EAQ AI NG +L QTL V +AFS GP
Sbjct: 69 VKGYALIEYETKKEAQAAIDGANGSSMLDQTLEVSFAFSKGP 110
>gi|218193960|gb|EEC76387.1| hypothetical protein OsI_14012 [Oryza sativa Indica Group]
Length = 214
Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 96/148 (64%), Gaps = 33/148 (22%)
Query: 72 FESLGTDGGPG--PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGF 129
F+SL G PG PQRSIEGWI+LV+GV E+A+EDDL N F ++G +++LHLNL+RRTG+
Sbjct: 70 FDSLADAGNPGHGPQRSIEGWILLVSGVKEDAEEDDLYNTFSDFGHVKDLHLNLERRTGY 129
Query: 130 VK-----------------GYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP- 171
K GYAL+EYE+FEEAQ AI AMNG +LLT+T+ VDWAFS GP
Sbjct: 130 AKLLAVRASHIQLINLKGMGYALVEYESFEEAQTAIKAMNGTQLLTRTVYVDWAFSRGPI 189
Query: 172 ----STGPFKRKNMRPGRTHRSRSPRRR 195
ST P R RSR+P RR
Sbjct: 190 QKLTSTRPLHR---------RSRTPPRR 208
>gi|157114117|ref|XP_001652167.1| ss-DNA binding protein 12RNP2 precursor, putative [Aedes aegypti]
gi|108877401|gb|EAT41626.1| AAEL006748-PA [Aedes aegypti]
Length = 165
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 91/128 (71%), Gaps = 8/128 (6%)
Query: 48 KKTKGRGFREEA---DSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQED 104
+K KGRGF E+ ++ + RL D E+ PGPQRS+EGWI+ VT +HEEAQED
Sbjct: 31 RKRKGRGFGNESIPREAIDYERLQDDEEEA-----EPGPQRSVEGWILFVTSIHEEAQED 85
Query: 105 DLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVD 164
D+Q F E+G+I+N+HLNLDRRTGF+KGYAL+EYE +++A A A+N E+L QT+ VD
Sbjct: 86 DIQEKFCEFGDIKNIHLNLDRRTGFLKGYALVEYETYKQALAAKEALNASEILGQTIAVD 145
Query: 165 WAFSNGPS 172
W F GP
Sbjct: 146 WCFVKGPK 153
>gi|156397171|ref|XP_001637765.1| predicted protein [Nematostella vectensis]
gi|156224880|gb|EDO45702.1| predicted protein [Nematostella vectensis]
Length = 124
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 77/90 (85%)
Query: 83 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFE 142
P RS+EGWI+ VT +HEEAQEDD+ +F +YGEI+NLH+NLDRRTGF+KGYAL+EYE F+
Sbjct: 31 PARSVEGWILFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFK 90
Query: 143 EAQNAITAMNGGELLTQTLTVDWAFSNGPS 172
EAQ+A+ A+NG E+L Q ++VDWAF GPS
Sbjct: 91 EAQSALEALNGAEMLGQNISVDWAFIRGPS 120
>gi|240849591|ref|NP_001155710.1| RNA-binding protein 8A-like [Acyrthosiphon pisum]
gi|239788434|dbj|BAH70900.1| ACYPI007376 [Acyrthosiphon pisum]
Length = 165
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/136 (50%), Positives = 95/136 (69%), Gaps = 3/136 (2%)
Query: 48 KKTKGRGFREEADSERHSRLADRNFESL--GTDGGPGPQRSIEGWIILVTGVHEEAQEDD 105
++ KGRGF E++ + A F+S+ D GPGPQRS+EGWI+ ++ +HEEAQEDD
Sbjct: 28 RRRKGRGFDEKSKRDDIKDEA-MEFDSVDQNDDEGPGPQRSVEGWILFISSLHEEAQEDD 86
Query: 106 LQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDW 165
L + F E+G+I+NLHLNLDRRTGF+KGYAL+EYE+++EA A +N ++L Q ++VDW
Sbjct: 87 LHDKFAEFGKIKNLHLNLDRRTGFLKGYALVEYESYKEASRAREGLNNTDILGQQISVDW 146
Query: 166 AFSNGPSTGPFKRKNM 181
F GP R+ M
Sbjct: 147 CFVKGPKRIKKSRRRM 162
>gi|54695760|gb|AAV38252.1| RNA binding motif protein 8A [synthetic construct]
gi|61365985|gb|AAX42795.1| RNA binding motif protein 8A [synthetic construct]
Length = 175
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 90/124 (72%), Gaps = 4/124 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E S R +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFGSEEGSRARMR---EDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 93
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
EYGEI+N+HLNLDRRTG++KGY L+EYE ++EAQ A+ +NG +L+ Q ++VDW F G
Sbjct: 94 AEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRG 153
Query: 171 PSTG 174
P G
Sbjct: 154 PPKG 157
>gi|159477791|ref|XP_001696992.1| RNA binding motif protein [Chlamydomonas reinhardtii]
gi|158274904|gb|EDP00684.1| RNA binding motif protein [Chlamydomonas reinhardtii]
Length = 144
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 88/120 (73%), Gaps = 2/120 (1%)
Query: 49 KTKGRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQN 108
K KGRG R+ +E R F+ L + PGP S+EGW++ +TG++EEAQE+D+
Sbjct: 21 KRKGRGHRDA--TEWADRYGGARFKELDPNAKPGPTASVEGWVVFITGINEEAQEEDIHE 78
Query: 109 VFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFS 168
F E+GE++N+++NLDR+TGFVKGYAL+EY+N +EAQ AI MNG ELLTQT+ VDWAF
Sbjct: 79 AFAEFGEVKNIYMNLDRQTGFVKGYALVEYKNHKEAQTAINEMNGKELLTQTIQVDWAFK 138
>gi|194754653|ref|XP_001959609.1| GF11955 [Drosophila ananassae]
gi|190620907|gb|EDV36431.1| GF11955 [Drosophila ananassae]
Length = 165
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 86/125 (68%)
Query: 48 KKTKGRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQ 107
K KGRGF E+++ DR + PGPQRS+EGWI+ VT +HEEAQED++Q
Sbjct: 31 KHRKGRGFGGESNTREAIHSYDRVRNEDDDEQEPGPQRSVEGWILFVTSIHEEAQEDEIQ 90
Query: 108 NVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
F +YGEI+N+HLNLDRRTGF KGYAL+EYE ++A A A+NG E++ QT+ VDW F
Sbjct: 91 EKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWCF 150
Query: 168 SNGPS 172
GP
Sbjct: 151 VKGPK 155
>gi|313232791|emb|CBY19462.1| unnamed protein product [Oikopleura dioica]
Length = 154
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 100/162 (61%), Gaps = 25/162 (15%)
Query: 14 DDLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEADSERHSRLADRNFE 73
DD DED D+ +S + KGRG + E D ++E
Sbjct: 11 DDYSDEDVVHDIKKRAS------------------RKKGRGIDDIVKRE------DMDYE 46
Query: 74 SLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKG 132
+L DG PGPQRS+EGWI+ VTG+HEEA ED++ + F E+GEI+NL+LNLDRRTGF+KG
Sbjct: 47 TLDQDGDEPGPQRSVEGWILFVTGIHEEASEDEVFDKFSEFGEIKNLNLNLDRRTGFLKG 106
Query: 133 YALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTG 174
YALIEYE ++EAQNA+ ++G EL Q + VDWAF G G
Sbjct: 107 YALIEYEMYKEAQNALETLHGSELFEQKIEVDWAFVRGSLPG 148
>gi|218664745|gb|ACK99534.1| putative RNA binding motif protein 8A [Artemia franciscana]
Length = 166
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/147 (51%), Positives = 97/147 (65%), Gaps = 21/147 (14%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG---PGPQRSIEGWIILVTGVHEEAQEDDLQN 108
GRGF + +R FE++ T+G PGPQRS+EGWI+ VT VHEEA+ED + +
Sbjct: 36 GRGFVDSGKPDRDVG----GFEAMETEGEGDEPGPQRSVEGWILFVTNVHEEAEEDTIYD 91
Query: 109 VFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFS 168
FGEYGEI+NLHLNLDRRTG++KGYAL+EYE ++EA AI A+NG L Q + V+WAF
Sbjct: 92 KFGEYGEIKNLHLNLDRRTGYLKGYALVEYETYKEASAAIDALNGSTFLDQKILVNWAFV 151
Query: 169 NGPSTGPFKRKNMRPGRTHRSRSPRRR 195
GP ++HRS+ RRR
Sbjct: 152 KGPK------------KSHRSK--RRR 164
>gi|242247055|ref|NP_001156236.1| RNA-binding protein 8A-like [Acyrthosiphon pisum]
gi|239788072|dbj|BAH70731.1| ACYPI007226 [Acyrthosiphon pisum]
Length = 165
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 94/138 (68%), Gaps = 7/138 (5%)
Query: 48 KKTKGRGFREEADSERHSRLADR--NFESL--GTDGGPGPQRSIEGWIILVTGVHEEAQE 103
++ KGRGF D + + D F+S+ D GPGPQRS+EGWI+ ++ +HEEAQE
Sbjct: 28 RRRKGRGFE---DKSKRDNIKDEAMEFDSVDQADDDGPGPQRSVEGWILFISSLHEEAQE 84
Query: 104 DDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTV 163
DDL + F E+G+I+NLHLNLDRRTGF+KGYAL+EYE+++EA A +N ++L Q ++V
Sbjct: 85 DDLHDKFAEFGKIKNLHLNLDRRTGFLKGYALVEYESYKEAFRAREGLNNTDILGQQISV 144
Query: 164 DWAFSNGPSTGPFKRKNM 181
DW F GP R+ M
Sbjct: 145 DWCFVKGPKRIKKSRRRM 162
>gi|410171313|ref|XP_003960227.1| PREDICTED: RNA-binding protein 8A-like isoform 2 [Homo sapiens]
gi|119591824|gb|EAW71418.1| RNA binding motif protein 8A, isoform CRA_a [Homo sapiens]
Length = 213
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 89/121 (73%), Gaps = 4/121 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E S R +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFGSEEGSRARMR---EDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 93
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
EYGEI+N+HLNLDRRTG++KGY L+EYE ++EAQ A+ +NG +L+ Q ++VDW F G
Sbjct: 94 AEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRG 153
Query: 171 P 171
P
Sbjct: 154 P 154
>gi|222626022|gb|EEE60154.1| hypothetical protein OsJ_13057 [Oryza sativa Japonica Group]
Length = 214
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 96/148 (64%), Gaps = 33/148 (22%)
Query: 72 FESLGTDGGPG--PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGF 129
F+SL G PG P+RSIEGWI+LV+GV E+A+EDDL N F ++G +++LHLNL+RRTG+
Sbjct: 70 FDSLADAGNPGHGPKRSIEGWILLVSGVKEDAEEDDLYNTFSDFGHVKDLHLNLERRTGY 129
Query: 130 VK-----------------GYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP- 171
K GYAL+EYE+FEEAQ AI AMNG +LLT+T+ VDWAFS GP
Sbjct: 130 AKLLAVRASHIQLINLKGMGYALVEYESFEEAQTAIKAMNGTQLLTRTVYVDWAFSRGPI 189
Query: 172 ----STGPFKRKNMRPGRTHRSRSPRRR 195
ST P R RSR+P RR
Sbjct: 190 QKLTSTRPLHR---------RSRTPPRR 208
>gi|344306675|ref|XP_003422011.1| PREDICTED: RNA-binding protein 8A-like [Loxodonta africana]
Length = 174
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 89/121 (73%), Gaps = 4/121 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E S R +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFGSEEGSRARMR---EDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 93
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
EYGEI+N+HLNLDRRTG++KGY L+EYE ++EAQ A+ +NG +L+ Q ++VDW F G
Sbjct: 94 AEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRG 153
Query: 171 P 171
P
Sbjct: 154 P 154
>gi|61651846|ref|NP_001013363.1| RNA-binding protein 8A [Danio rerio]
gi|82230908|sp|Q5D018.1|RBM8A_DANRE RecName: Full=RNA-binding protein 8A; AltName: Full=RNA-binding
motif protein 8A; AltName: Full=Ribonucleoprotein RBM8A
gi|60422788|gb|AAH90261.1| Zgc:110525 [Danio rerio]
Length = 174
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 90/121 (74%), Gaps = 4/121 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E + R +++++ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFGSEEGARSRVR---EDYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDVHDKF 93
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
E+GEI+NLHLNLDRRTG++KGYAL+EYE ++EAQ A+ +NG EL+ Q ++VDW F G
Sbjct: 94 AEFGEIKNLHLNLDRRTGYLKGYALVEYETYKEAQAAMEGLNGQELMGQPISVDWCFVRG 153
Query: 171 P 171
P
Sbjct: 154 P 154
>gi|299745440|ref|XP_001831719.2| RNP containing family member [Coprinopsis cinerea okayama7#130]
gi|298406586|gb|EAU90050.2| RNP containing family member [Coprinopsis cinerea okayama7#130]
Length = 164
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 84/119 (70%), Gaps = 4/119 (3%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G RS+EGWI+LVT VHEEA E+D+Q+ F EYGEI+NLHLNLDRRTG+VKGYAL+
Sbjct: 49 TSGDTRAARSVEGWIVLVTNVHEEATEEDVQDKFSEYGEIKNLHLNLDRRTGYVKGYALV 108
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
EYE EAQNAI + +G LL QT+ D+AF P TGP K + R RS SP RR
Sbjct: 109 EYETMAEAQNAIDSASGSTLLEQTIQCDYAFVRPPPTGPKKGRGQRG----RSASPGRR 163
>gi|389609977|dbj|BAM18600.1| tsunagi [Papilio xuthus]
Length = 166
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 61/111 (54%), Positives = 87/111 (78%), Gaps = 3/111 (2%)
Query: 72 FESLGTDG---GPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTG 128
++SL +G PGPQRS+EGWI+ V+ VHEEAQE+D+QN F E+GEI+N+HLNLDRRTG
Sbjct: 56 YDSLAPEGDGNAPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTG 115
Query: 129 FVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRK 179
F+KGYAL+EYE +++A +A +++G ++L Q ++VDW F GP+ KR+
Sbjct: 116 FLKGYALVEYETYKQAASARESLDGADILGQAISVDWCFVKGPTKTHKKRR 166
>gi|113931396|ref|NP_001039147.1| RNA-binding protein 8A [Xenopus (Silurana) tropicalis]
gi|123915894|sp|Q28BZ1.1|RBM8A_XENTR RecName: Full=RNA-binding protein 8A; AltName: Full=RNA-binding
motif protein 8A; AltName: Full=Ribonucleoprotein RBM8A
gi|89272537|emb|CAJ83674.1| RNA binding motif protein 8A [Xenopus (Silurana) tropicalis]
gi|163916598|gb|AAI57758.1| RNA binding motif protein 8A [Xenopus (Silurana) tropicalis]
Length = 174
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 94/124 (75%), Gaps = 4/124 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF AD +R+ + +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFG--ADEGTRARIRE-DYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 93
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
GE+GEI+N+HLNLDRRTGF+KGYAL+EYE ++EA A+ +NG +L+ Q ++VDW F G
Sbjct: 94 GEFGEIKNIHLNLDRRTGFLKGYALVEYETYKEALAAMEGLNGQDLMGQPISVDWGFVRG 153
Query: 171 PSTG 174
P G
Sbjct: 154 PPKG 157
>gi|225715720|gb|ACO13706.1| RNA-binding protein 8A [Esox lucius]
Length = 175
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 106/171 (61%), Gaps = 23/171 (13%)
Query: 6 VDALDFED----DDLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEADS 61
D LD + D MDEDG + KLK K+ KGRGF E +
Sbjct: 2 ADVLDLHEAGGEDFAMDEDGDDSI----------HKLKEK-----AKRRKGRGFGSEEGA 46
Query: 62 ERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLH 120
R +++++ DG PGPQRS+EGWI+ VTGVHE A E+D+ + F E+GEI+NLH
Sbjct: 47 RSRVR---EDYDTVEQDGDEPGPQRSVEGWILFVTGVHEGATEEDIHDEFAEFGEIKNLH 103
Query: 121 LNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
LNLDRRTG++KGYAL+EYE ++EAQ A+ +NG +++ Q ++VDW F GP
Sbjct: 104 LNLDRRTGYLKGYALVEYETYKEAQAAMEGLNGQDMMGQPISVDWGFVRGP 154
>gi|147907268|ref|NP_001079905.1| RNA-binding protein 8A-B [Xenopus laevis]
gi|82237769|sp|Q6PH90.1|RB8AB_XENLA RecName: Full=RNA-binding protein 8A-B; AltName: Full=RNA-binding
motif protein 8A-B; AltName: Full=Ribonucleoprotein
RBM8A-B
gi|34784590|gb|AAH56659.1| MGC68591 protein [Xenopus laevis]
Length = 174
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 94/124 (75%), Gaps = 4/124 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF AD +R+ + +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFG--ADEGTRTRIRE-DYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 93
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
GE+GEI+N+HLNLDRRTGF+KGYAL+EYE ++EA A+ +NG +L+ Q ++VDW F G
Sbjct: 94 GEFGEIKNIHLNLDRRTGFLKGYALVEYETYKEALAAMEGLNGQDLMGQPVSVDWGFVRG 153
Query: 171 PSTG 174
P G
Sbjct: 154 PPKG 157
>gi|357620608|gb|EHJ72749.1| RNA binding motif protein Y14 [Danaus plexippus]
Length = 165
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 112/178 (62%), Gaps = 20/178 (11%)
Query: 7 DALDFEDDDL--MDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEADSERH 64
D LD E+ + +DEDG + +LK +K KGRGF EA
Sbjct: 3 DVLDIENSEEFEVDEDGEQGI----------VRLKEK-----ARKRKGRGFGSEAGGGGS 47
Query: 65 SRLADRNFESLGTDGG---PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHL 121
R ++SL +G PGPQRS+EGWI+ V+ VHEEAQE+D+QN F E+GEI+N+HL
Sbjct: 48 ERGNRGRYDSLAPEGNGNTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHL 107
Query: 122 NLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRK 179
NLDRRTGF+KGYAL+EYE +++A +A A++G ++L Q ++VDW F GP+ KR+
Sbjct: 108 NLDRRTGFLKGYALVEYETYKQAASAREALDGTDILGQAISVDWCFVKGPTKTHKKRR 165
>gi|24651979|ref|NP_610454.2| tsunagi [Drosophila melanogaster]
gi|194863272|ref|XP_001970361.1| GG23412 [Drosophila erecta]
gi|195474936|ref|XP_002089742.1| GE19253 [Drosophila yakuba]
gi|55584089|sp|Q9V535.1|RBM8A_DROME RecName: Full=RNA-binding protein 8A; AltName: Full=Protein tsunagi
gi|31615362|pdb|1HL6|A Chain A, A Novel Mode Of Rbd-Protein Recognition In The Y14-Mago
Complex
gi|31615364|pdb|1HL6|C Chain C, A Novel Mode Of Rbd-Protein Recognition In The Y14-Mago
Complex
gi|48425350|pdb|1RK8|A Chain A, Structure Of The Cytosolic Protein Pym Bound To The Mago-
Y14 Core Of The Exon Junction Complex
gi|288965344|pdb|2X1G|A Chain A, Crystal Structure Of Importin13 - Mago-Y14 Complex
gi|288965346|pdb|2X1G|C Chain C, Crystal Structure Of Importin13 - Mago-Y14 Complex
gi|7303943|gb|AAF58987.1| tsunagi [Drosophila melanogaster]
gi|190662228|gb|EDV59420.1| GG23412 [Drosophila erecta]
gi|194175843|gb|EDW89454.1| GE19253 [Drosophila yakuba]
gi|326439098|gb|ADZ74171.1| RE01574p [Drosophila melanogaster]
Length = 165
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 90/128 (70%), Gaps = 8/128 (6%)
Query: 48 KKTKGRGFREEADSERHSRLADRNFESLGTDGG----PGPQRSIEGWIILVTGVHEEAQE 103
K KGRGF S+ ++R A ++E + + PGPQRS+EGWI+ VT +HEEAQE
Sbjct: 31 KHRKGRGF----GSDSNTREAIHSYERVRNEDDDELEPGPQRSVEGWILFVTSIHEEAQE 86
Query: 104 DDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTV 163
D++Q F +YGEI+N+HLNLDRRTGF KGYAL+EYE ++A A A+NG E++ QT+ V
Sbjct: 87 DEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQV 146
Query: 164 DWAFSNGP 171
DW F GP
Sbjct: 147 DWCFVKGP 154
>gi|157278098|ref|NP_001098149.1| RNA binding motif protein 8 [Oryzias latipes]
gi|20804379|dbj|BAB92096.1| RNA binding motif protein 8 [Oryzias latipes]
Length = 173
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 92/121 (76%), Gaps = 4/121 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF AD SR A +++++ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 35 GRGFG--ADDGARSR-AKEDYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 91
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
E+GEI+NLHLNLDRRTG++KGYAL+EYE ++EAQ A+ +N +L+ Q ++VDWAF G
Sbjct: 92 SEFGEIKNLHLNLDRRTGYLKGYALVEYETYKEAQAAMEGLNAQDLMGQPVSVDWAFVRG 151
Query: 171 P 171
P
Sbjct: 152 P 152
>gi|20804381|dbj|BAB92097.1| RNA binding motif protein 8 [Oryzias latipes]
Length = 172
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 92/121 (76%), Gaps = 4/121 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF AD SR A +++++ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 34 GRGFG--ADDGARSR-AKEDYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 90
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
E+GEI+NLHLNLDRRTG++KGYAL+EYE ++EAQ A+ +N +L+ Q ++VDWAF G
Sbjct: 91 SEFGEIKNLHLNLDRRTGYLKGYALVEYETYKEAQAAMEGLNAQDLMGQPVSVDWAFVRG 150
Query: 171 P 171
P
Sbjct: 151 P 151
>gi|391332745|ref|XP_003740790.1| PREDICTED: RNA-binding protein 8A-like [Metaseiulus occidentalis]
Length = 165
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 102/169 (60%), Gaps = 15/169 (8%)
Query: 15 DLMDEDGTADVDASSSPRAPQP--KLKSAITGGAPKKTKGRGFREEADSERHSRLADRNF 72
D++D G A Q KLK + K+ KGRGFR + + R R++
Sbjct: 3 DVLDLQGEAGEFEDEVEDDEQNVNKLKERV-----KRRKGRGFRGDGTA----REDIRDY 53
Query: 73 ESL----GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTG 128
E++ G GPGPQRS+EGWI++VTGV+EEAQEDD+ F +YGEI+NLHLNLDRRTG
Sbjct: 54 EAMEADAGDQSGPGPQRSVEGWILIVTGVNEEAQEDDIHQKFADYGEIKNLHLNLDRRTG 113
Query: 129 FVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFK 177
F+KGYAL+E+ ++ EAQ A +N + Q + VDW F P F+
Sbjct: 114 FLKGYALVEFSSYAEAQKAKNELNNSTIFDQEIKVDWCFVKEPKRRGFR 162
>gi|195455601|ref|XP_002074790.1| GK23248 [Drosophila willistoni]
gi|194170875|gb|EDW85776.1| GK23248 [Drosophila willistoni]
Length = 165
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 91/130 (70%), Gaps = 8/130 (6%)
Query: 47 PKKTKGRGFREEADSERHSRLADRNFESLGTDGG----PGPQRSIEGWIILVTGVHEEAQ 102
K KGRGF ADS ++R A ++E + + PGPQRS+EGWI+ VT +HEEAQ
Sbjct: 30 AKHRKGRGFG--ADS--NTREAIHSYERVRNEDDDELEPGPQRSVEGWILFVTSIHEEAQ 85
Query: 103 EDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLT 162
ED++Q F +YGEI+N+HLNLDRRTGF KGYAL+EYE ++A A A+NG E++ QT+
Sbjct: 86 EDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQ 145
Query: 163 VDWAFSNGPS 172
VDW F GP
Sbjct: 146 VDWCFVKGPK 155
>gi|224090075|ref|XP_002308932.1| predicted protein [Populus trichocarpa]
gi|222854908|gb|EEE92455.1| predicted protein [Populus trichocarpa]
Length = 186
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/106 (63%), Positives = 80/106 (75%), Gaps = 5/106 (4%)
Query: 69 DRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTG 128
DRN L T P RS+EGW +L++GVHEEAQEDD+ +FG +G I NLHLNLDRRTG
Sbjct: 59 DRNVLQLFT-----PLRSVEGWSVLLSGVHEEAQEDDILTLFGAFGHINNLHLNLDRRTG 113
Query: 129 FVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTG 174
F+KGYALIEYENF EAQ AI+ MNG +L + ++VDWAFS GP G
Sbjct: 114 FLKGYALIEYENFMEAQAAISGMNGTKLFFRIISVDWAFSTGPFEG 159
>gi|148238122|ref|NP_001083872.1| RNA-binding protein 8A-A [Xenopus laevis]
gi|82247070|sp|Q9DF42.1|RB8AA_XENLA RecName: Full=RNA-binding protein 8A-A; AltName: Full=RNA-binding
motif protein 8A-A; AltName: Full=Ribonucleoprotein
RBM8A-A
gi|11034807|gb|AAG27092.1|AF299119_1 RNA-binding protein Y14 [Xenopus laevis]
gi|49118357|gb|AAH73361.1| Rbm8 protein [Xenopus laevis]
Length = 174
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 93/124 (75%), Gaps = 4/124 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF AD +R+ + ++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFG--ADEGTKTRIREV-YDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 93
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
GE+GEI+N+HLNLDRRTGF+KGYAL+EYE ++EA A+ +NG +L+ Q ++VDW F G
Sbjct: 94 GEFGEIKNIHLNLDRRTGFLKGYALVEYETYKEALAAMEGLNGQDLMGQPVSVDWGFVRG 153
Query: 171 PSTG 174
P G
Sbjct: 154 PPKG 157
>gi|256070788|ref|XP_002571724.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|360043150|emb|CCD78562.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 177
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 104/161 (64%), Gaps = 13/161 (8%)
Query: 15 DLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEADSERHSRLADRNFES 74
D++D G D + + KLK + KK KGRGF ADS ++ +ES
Sbjct: 3 DVLDLHGENDFEEDADGDHGLMKLKES-----AKKRKGRGFG--ADSVGTTK---EGYES 52
Query: 75 LGTDGGP---GPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVK 131
L D G GPQRS+EGWI+ V V EEA E+D+++ F EYG+I+N+HLNLDRRTG++K
Sbjct: 53 LVVDDGSSKSGPQRSVEGWILFVRNVQEEATEEDIRDKFCEYGDIKNIHLNLDRRTGYLK 112
Query: 132 GYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPS 172
GYAL+EYENF+EA A+ +NG EL Q + VDWAF+ GP+
Sbjct: 113 GYALVEYENFKEAFTAMEHLNGSELNGQRILVDWAFTKGPN 153
>gi|129562659|gb|ABO31095.1| tsunagi [Schistosoma japonicum]
Length = 176
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 104/160 (65%), Gaps = 12/160 (7%)
Query: 15 DLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEADSERHSRLADRNFES 74
D++D G D + + KLK + K+ KGRGF ADS ++ +ES
Sbjct: 3 DVLDLHGENDFEEDADGDHGLIKLKES-----AKRRKGRGFG--ADSVGTTK---EGYES 52
Query: 75 LGTDGGP--GPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKG 132
L D G GPQRS+EGWI+ V V EEA E+D+++ F EYG+I+N+HLNLDRRTG++KG
Sbjct: 53 LIVDDGSKSGPQRSVEGWILFVRNVQEEATEEDIRDKFCEYGDIKNIHLNLDRRTGYLKG 112
Query: 133 YALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPS 172
YAL+EYENF+EA A+ +NG EL Q + VDWAF+ GP+
Sbjct: 113 YALVEYENFKEAHTAMEQLNGSELNGQRIHVDWAFTKGPN 152
>gi|412993062|emb|CCO16595.1| RNA-binding protein 8A [Bathycoccus prasinos]
Length = 157
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 97/130 (74%), Gaps = 9/130 (6%)
Query: 48 KKTKGRGFREEAD----SERHSRLADRNFESL-GTDGGPG-PQRSIEGWIILVTGVHEEA 101
++ KGRGF E AD +HSR DR +E+L ++G G PQ+SIEGW++LVTGVHEEA
Sbjct: 21 RRQKGRGF-ENADIIDDEVKHSR-NDR-YETLRDSEGERGQPQKSIEGWVVLVTGVHEEA 77
Query: 102 QEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTL 161
QE+D+ FG++GEI NLHLNLDRRTGFVKGY LIEY+ EEA++AI M+G +L Q +
Sbjct: 78 QEEDVHENFGDFGEISNLHLNLDRRTGFVKGYCLIEYKEKEEAKSAIENMDGKLMLDQEV 137
Query: 162 TVDWAFSNGP 171
VDWAF N P
Sbjct: 138 RVDWAFVNAP 147
>gi|443726126|gb|ELU13419.1| hypothetical protein CAPTEDRAFT_222447 [Capitella teleta]
Length = 177
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 77/95 (81%)
Query: 78 DGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIE 137
DG PGPQRS+EGWI+ ++ V EEAQEDD+ + F EYG I+N+HLNLDRRTG++KGY+L+E
Sbjct: 60 DGAPGPQRSVEGWILFISSVQEEAQEDDIMDKFSEYGNIKNVHLNLDRRTGYLKGYSLVE 119
Query: 138 YENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPS 172
Y+ + EAQ+A+ +NG E+L Q + VDWAF GPS
Sbjct: 120 YDTYNEAQSAMENLNGTEILGQKINVDWAFVRGPS 154
>gi|17945135|gb|AAL48627.1| RE09075p [Drosophila melanogaster]
Length = 165
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 90/128 (70%), Gaps = 8/128 (6%)
Query: 48 KKTKGRGFREEADSERHSRLADRNFESLGTDGG----PGPQRSIEGWIILVTGVHEEAQE 103
K KGRGF S+ ++R A ++E + + PGPQRS+EGWI+ VT +HEEAQE
Sbjct: 31 KHRKGRGF----GSDSNTREAIHSYERVRNEDDDELEPGPQRSVEGWILFVTSIHEEAQE 86
Query: 104 DDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTV 163
D++Q F +YGEI+++HLNLDRRTGF KGYAL+EYE ++A A A+NG E++ QT+ V
Sbjct: 87 DEIQEKFCDYGEIKSIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQV 146
Query: 164 DWAFSNGP 171
DW F GP
Sbjct: 147 DWCFVKGP 154
>gi|349804129|gb|AEQ17537.1| putative rna binding motif protein 8a [Hymenochirus curtipes]
Length = 135
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 89/123 (72%), Gaps = 4/123 (3%)
Query: 53 RGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVFG 111
RGF E S R +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + FG
Sbjct: 1 RGFGAEEGSRARVR---EDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFG 57
Query: 112 EYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
E+GEI+N+HLNLDRRTG++KGYAL+EYE ++EA A+ +N EL+ Q ++VDW F GP
Sbjct: 58 EFGEIKNVHLNLDRRTGYLKGYALVEYETYKEALAAMEGLNSQELMGQAISVDWGFVRGP 117
Query: 172 STG 174
G
Sbjct: 118 PKG 120
>gi|195332707|ref|XP_002033035.1| GM21093 [Drosophila sechellia]
gi|195581782|ref|XP_002080709.1| GD10630 [Drosophila simulans]
gi|194125005|gb|EDW47048.1| GM21093 [Drosophila sechellia]
gi|194192718|gb|EDX06294.1| GD10630 [Drosophila simulans]
Length = 165
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 89/130 (68%), Gaps = 8/130 (6%)
Query: 47 PKKTKGRGFREEADSERHSRLADRNFESLGTDGG----PGPQRSIEGWIILVTGVHEEAQ 102
K KGRGF + ++R A ++E + + PGPQRS+EGWI+ VT +HEEAQ
Sbjct: 30 AKHRKGRGF----GGDSNTREAIHSYERVRNEDDDELEPGPQRSVEGWILFVTSIHEEAQ 85
Query: 103 EDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLT 162
ED++Q F +YGEI+N+HLNLDRRTGF KGYAL+EYE ++A A A+NG E++ QT+
Sbjct: 86 EDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQ 145
Query: 163 VDWAFSNGPS 172
VDW F GP
Sbjct: 146 VDWCFVKGPK 155
>gi|302843752|ref|XP_002953417.1| hypothetical protein VOLCADRAFT_75761 [Volvox carteri f.
nagariensis]
gi|300261176|gb|EFJ45390.1| hypothetical protein VOLCADRAFT_75761 [Volvox carteri f.
nagariensis]
Length = 140
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 88/123 (71%), Gaps = 2/123 (1%)
Query: 45 GAPKKTKGRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQED 104
G KK KGRG R+ +E R F+ L + PGP S+EGW++ +TGV+EEAQE+
Sbjct: 13 GLDKKRKGRGHRDT--TEWADRYGGARFKELDPNAKPGPTASVEGWVVFITGVNEEAQEE 70
Query: 105 DLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVD 164
D+ F E+G+++N++LNLDR+TGFVKGYAL+EY+ +EAQ AI MNG +LL QTL VD
Sbjct: 71 DIHEAFAEFGDVKNIYLNLDRQTGFVKGYALVEYKTQKEAQAAINEMNGKKLLEQTLQVD 130
Query: 165 WAF 167
WAF
Sbjct: 131 WAF 133
>gi|195154732|ref|XP_002018273.1| GL17620 [Drosophila persimilis]
gi|194114069|gb|EDW36112.1| GL17620 [Drosophila persimilis]
Length = 165
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 98/161 (60%), Gaps = 13/161 (8%)
Query: 15 DLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEADSERHSRLADRNFES 74
D++D D + + +LK K KGRGF ++ R A ++E
Sbjct: 3 DVLDIDNAEEFEVDEDGDQSIVRLKEK-----AKHRKGRGFGNDSSI----REAIHSYER 53
Query: 75 LGTDGG----PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFV 130
+ + PGPQRS+EGWI+ VT +HEEAQED++Q F +YGEI+N+HLNLDRRTGF
Sbjct: 54 VRNEDDDELEPGPQRSVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFS 113
Query: 131 KGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
KGYAL+EYE ++A A A+NG E++ QT+ VDW F GP
Sbjct: 114 KGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWCFVKGP 154
>gi|195119412|ref|XP_002004225.1| GI19803 [Drosophila mojavensis]
gi|193909293|gb|EDW08160.1| GI19803 [Drosophila mojavensis]
Length = 165
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 90/128 (70%), Gaps = 8/128 (6%)
Query: 48 KKTKGRGFREEADSERHSRLADRNFESLGTDGG----PGPQRSIEGWIILVTGVHEEAQE 103
K KGRGF S+ ++R A ++E + + PGPQRS+EGWI+ VT +HEEAQE
Sbjct: 31 KHRKGRGF----GSDSNTREAIHSYERVRNEDDDELEPGPQRSVEGWILFVTSIHEEAQE 86
Query: 104 DDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTV 163
D++Q F +YGEI+N+HLNLDRRTGF KGYAL+EYE ++A A A+NG +++ QT+ V
Sbjct: 87 DEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGTDIMGQTIQV 146
Query: 164 DWAFSNGP 171
DW F GP
Sbjct: 147 DWCFVKGP 154
>gi|321470405|gb|EFX81381.1| tsunagi-like protein [Daphnia pulex]
Length = 163
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 76/91 (83%)
Query: 81 PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYEN 140
PGPQRS+EGWI+ VTGV+EEAQE+D+ + F E+GEI+N+HLNLDRRTGF+KGYAL+EYE
Sbjct: 63 PGPQRSVEGWILFVTGVNEEAQEEDIHDKFAEFGEIKNIHLNLDRRTGFLKGYALVEYET 122
Query: 141 FEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
F+EAQ A+ +N E+L Q ++VDW F GP
Sbjct: 123 FKEAQAALEKLNESEILGQKISVDWCFVKGP 153
>gi|195029527|ref|XP_001987624.1| GH19854 [Drosophila grimshawi]
gi|193903624|gb|EDW02491.1| GH19854 [Drosophila grimshawi]
Length = 165
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 90/128 (70%), Gaps = 8/128 (6%)
Query: 48 KKTKGRGFREEADSERHSRLADRNFESLGTDGG----PGPQRSIEGWIILVTGVHEEAQE 103
K KGRGF S+ ++R A ++E + + PGPQRS+EGWI+ VT +HEEAQE
Sbjct: 31 KHRKGRGF----GSDSNTREAIHSYERVRIEDDDELEPGPQRSVEGWILFVTSIHEEAQE 86
Query: 104 DDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTV 163
D++Q F +YGEI+N+HLNLDRRTGF KGYAL+EYE ++A A A++G +++ QT+ V
Sbjct: 87 DEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALHGADIMGQTIQV 146
Query: 164 DWAFSNGP 171
DW F GP
Sbjct: 147 DWCFVKGP 154
>gi|229366076|gb|ACQ58018.1| RNA-binding protein 8A [Anoplopoma fimbria]
Length = 175
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 92/121 (76%), Gaps = 4/121 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E + SR+ + +++++ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFSSEEGA--RSRIKE-DYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 93
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
E+GEI+NLHLNLDRRTG++KGYAL+EYE ++EAQ A+ +N +++ Q ++VDW F G
Sbjct: 94 SEFGEIKNLHLNLDRRTGYLKGYALVEYETYKEAQAAMEGLNAQDMMGQPISVDWGFVRG 153
Query: 171 P 171
P
Sbjct: 154 P 154
>gi|426216429|ref|XP_004002465.1| PREDICTED: RNA-binding protein 8A [Ovis aries]
Length = 175
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 91/117 (77%), Gaps = 3/117 (2%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E + R +R+ + +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFGSEEEGSR-ARMRE-DYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 94
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
EYGEI+N+HLNLDRRTG++KGY L+EYE ++EAQ A+ +NG +L+ Q ++VDW F
Sbjct: 95 AEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCF 151
>gi|125809441|ref|XP_001361119.1| GA21317 [Drosophila pseudoobscura pseudoobscura]
gi|54636292|gb|EAL25695.1| GA21317 [Drosophila pseudoobscura pseudoobscura]
Length = 165
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/130 (53%), Positives = 89/130 (68%), Gaps = 12/130 (9%)
Query: 48 KKTKGRGF------REEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEA 101
K KGRGF RE S + R+ + + + L PGPQRS+EGWI+ VT +HEEA
Sbjct: 31 KHRKGRGFGNDSSIREAIHS--YERVRNEDDDELE----PGPQRSVEGWILFVTSIHEEA 84
Query: 102 QEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTL 161
QED++Q F +YGEI+N+HLNLDRRTGF KGYAL+EYE ++A A A+NG E++ QT+
Sbjct: 85 QEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTI 144
Query: 162 TVDWAFSNGP 171
VDW F GP
Sbjct: 145 QVDWCFVKGP 154
>gi|440903805|gb|ELR54412.1| RNA-binding protein 8A [Bos grunniens mutus]
Length = 177
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 87/117 (74%), Gaps = 4/117 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E S R +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 40 GRGFGSEEGSRARMR---EDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 96
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
EYGEI+N+HLNLDRRTG++KGY L+EYE ++EAQ A+ +NG +L+ Q ++VDW F
Sbjct: 97 AEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCF 153
>gi|195401569|ref|XP_002059385.1| GJ18464 [Drosophila virilis]
gi|194142391|gb|EDW58797.1| GJ18464 [Drosophila virilis]
Length = 165
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 90/128 (70%), Gaps = 8/128 (6%)
Query: 48 KKTKGRGFREEADSERHSRLADRNFESLGTDGG----PGPQRSIEGWIILVTGVHEEAQE 103
K KGRGF S+ ++R A ++E + + PGPQRS+EGWI+ VT +HEEAQE
Sbjct: 31 KHRKGRGF----GSDSNTREAIHSYERVRNEDDDELEPGPQRSVEGWILFVTSIHEEAQE 86
Query: 104 DDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTV 163
D++Q F +YGEI+N+HLNLDRRTGF KGYAL+EYE ++A A A++G +++ QT+ V
Sbjct: 87 DEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALHGADIMGQTIQV 146
Query: 164 DWAFSNGP 171
DW F GP
Sbjct: 147 DWCFVKGP 154
>gi|91093417|ref|XP_967777.1| PREDICTED: similar to AGAP006365-PA [Tribolium castaneum]
gi|270015421|gb|EFA11869.1| tsunagi [Tribolium castaneum]
Length = 164
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 108/176 (61%), Gaps = 17/176 (9%)
Query: 15 DLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEADSERHSRLADRNFES 74
D++D + + ++D +LK + K KGRGF +++ H ++ R +ES
Sbjct: 3 DVLDINDSVELDVEDEGDQSVLRLKDKVV-----KRKGRGFGP-GETKEHEKI--RGYES 54
Query: 75 LGT-DGG--PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVK 131
+ + D G PGPQ+S+EGWI+ VT VHEEA EDDL F E+G I+N+ +NLDRRTGF+K
Sbjct: 55 IDSGDHGDEPGPQKSVEGWILFVTSVHEEASEDDLSEKFSEFGAIKNISINLDRRTGFLK 114
Query: 132 GYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTH 187
GYALIEY +EEA A A+NG LL QT+ VDW F GP +K+ + R H
Sbjct: 115 GYALIEYGTYEEAFAAREALNGSLLLGQTVGVDWCFVKGP------KKSKKRARRH 164
>gi|4826972|ref|NP_005096.1| RNA-binding protein 8A [Homo sapiens]
gi|162287296|ref|NP_001095877.1| RNA-binding protein 8A isoform a [Mus musculus]
gi|255653066|ref|NP_001157445.1| RNA-binding protein 8A [Equus caballus]
gi|402794801|ref|NP_001258067.1| RNA-binding protein 8A [Rattus norvegicus]
gi|57098771|ref|XP_533035.1| PREDICTED: RNA-binding protein 8A [Canis lupus familiaris]
gi|109467213|ref|XP_001059872.1| PREDICTED: RNA-binding protein 8A [Rattus norvegicus]
gi|114558452|ref|XP_001162472.1| PREDICTED: RNA-binding protein 8A isoform 2 [Pan troglodytes]
gi|194036316|ref|XP_001927895.1| PREDICTED: RNA-binding protein 8A [Sus scrofa]
gi|291398095|ref|XP_002715691.1| PREDICTED: RNA binding motif protein 8A [Oryctolagus cuniculus]
gi|296228547|ref|XP_002759858.1| PREDICTED: RNA-binding protein 8A [Callithrix jacchus]
gi|301778389|ref|XP_002924609.1| PREDICTED: RNA-binding protein 8A-like [Ailuropoda melanoleuca]
gi|332237903|ref|XP_003268146.1| PREDICTED: RNA-binding protein 8A isoform 1 [Nomascus leucogenys]
gi|354472881|ref|XP_003498665.1| PREDICTED: RNA-binding protein 8A-like [Cricetulus griseus]
gi|395729941|ref|XP_002810362.2| PREDICTED: RNA-binding protein 8A isoform 1 [Pongo abelii]
gi|395842036|ref|XP_003793826.1| PREDICTED: RNA-binding protein 8A isoform 1 [Otolemur garnettii]
gi|395842038|ref|XP_003793827.1| PREDICTED: RNA-binding protein 8A isoform 2 [Otolemur garnettii]
gi|397469175|ref|XP_003806237.1| PREDICTED: RNA-binding protein 8A [Pan paniscus]
gi|402855968|ref|XP_003892580.1| PREDICTED: RNA-binding protein 8A [Papio anubis]
gi|403307918|ref|XP_003944429.1| PREDICTED: RNA-binding protein 8A [Saimiri boliviensis boliviensis]
gi|410171311|ref|XP_003960226.1| PREDICTED: RNA-binding protein 8A-like isoform 1 [Homo sapiens]
gi|410968192|ref|XP_003990593.1| PREDICTED: RNA-binding protein 8A [Felis catus]
gi|426331096|ref|XP_004026531.1| PREDICTED: RNA-binding protein 8A [Gorilla gorilla gorilla]
gi|10720244|sp|Q9Y5S9.1|RBM8A_HUMAN RecName: Full=RNA-binding protein 8A; AltName: Full=Binder of
OVCA1-1; Short=BOV-1; AltName: Full=RNA-binding motif
protein 8A; AltName: Full=RNA-binding protein Y14;
AltName: Full=Ribonucleoprotein RBM8A
gi|123782911|sp|Q27W01.1|RBM8A_RAT RecName: Full=RNA-binding protein 8A; AltName: Full=RNA-binding
motif protein 8A; AltName: Full=Ribonucleoprotein RBM8A
gi|251757320|sp|Q3ZCE8.2|RBM8A_BOVIN RecName: Full=RNA-binding protein 8A; AltName: Full=RNA-binding
motif protein 8A
gi|6841450|gb|AAF29078.1|AF161463_1 HSPC114 [Homo sapiens]
gi|11034805|gb|AAG27091.1|AF299118_1 RNA-binding protein Y14 [Homo sapiens]
gi|16589052|gb|AAL26999.1|AF403012_1 ribonucleoprotein RBM8 [Homo sapiens]
gi|4455129|gb|AAD21089.1| ribonucleoprotein RBM8 [Homo sapiens]
gi|16877694|gb|AAH17088.1| RNA binding motif protein 8A [Homo sapiens]
gi|26350107|dbj|BAC38693.1| unnamed protein product [Mus musculus]
gi|49456567|emb|CAG46604.1| RBM8A [Homo sapiens]
gi|60814764|gb|AAX36317.1| RNA binding motif protein 8A [synthetic construct]
gi|88604477|gb|ABD46661.1| RNA-binding motif protein 8, partial [Rattus norvegicus]
gi|95768149|gb|ABF57332.1| RNA binding motif protein 8A [Bos taurus]
gi|119591825|gb|EAW71419.1| RNA binding motif protein 8A, isoform CRA_b [Homo sapiens]
gi|149030583|gb|EDL85620.1| RNA binding motif protein 8 (predicted) [Rattus norvegicus]
gi|193786728|dbj|BAG52051.1| unnamed protein product [Homo sapiens]
gi|254071315|gb|ACT64417.1| RNA binding motif protein 8A protein [synthetic construct]
gi|254071317|gb|ACT64418.1| RNA binding motif protein 8A protein [synthetic construct]
gi|261861042|dbj|BAI47043.1| RNA binding motif protein 8A [synthetic construct]
gi|351703772|gb|EHB06691.1| RNA-binding protein 8A [Heterocephalus glaber]
gi|355558352|gb|EHH15132.1| hypothetical protein EGK_01181 [Macaca mulatta]
gi|355745614|gb|EHH50239.1| hypothetical protein EGM_01033 [Macaca fascicularis]
gi|380818544|gb|AFE81145.1| RNA-binding protein 8A [Macaca mulatta]
gi|383423363|gb|AFH34895.1| RNA-binding protein 8A [Macaca mulatta]
gi|383423365|gb|AFH34896.1| RNA-binding protein 8A [Macaca mulatta]
gi|383423367|gb|AFH34897.1| RNA-binding protein 8A [Macaca mulatta]
gi|383423369|gb|AFH34898.1| RNA-binding protein 8A [Macaca mulatta]
gi|384940954|gb|AFI34082.1| RNA-binding protein 8A [Macaca mulatta]
gi|410215274|gb|JAA04856.1| RNA binding motif protein 8A [Pan troglodytes]
gi|410252474|gb|JAA14204.1| RNA binding motif protein 8A [Pan troglodytes]
gi|410302556|gb|JAA29878.1| RNA binding motif protein 8A [Pan troglodytes]
gi|410350893|gb|JAA42050.1| RNA binding motif protein 8A [Pan troglodytes]
gi|410350895|gb|JAA42051.1| RNA binding motif protein 8A [Pan troglodytes]
gi|431896583|gb|ELK05995.1| RNA-binding protein 8A [Pteropus alecto]
gi|432102033|gb|ELK29852.1| RNA-binding protein 8A [Myotis davidii]
gi|444708688|gb|ELW49735.1| RNA-binding protein 8A [Tupaia chinensis]
Length = 174
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 87/117 (74%), Gaps = 4/117 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E S R +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFGSEEGSRARMR---EDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 93
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
EYGEI+N+HLNLDRRTG++KGY L+EYE ++EAQ A+ +NG +L+ Q ++VDW F
Sbjct: 94 AEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCF 150
>gi|34810526|pdb|1P27|B Chain B, Crystal Structure Of The Human Y14MAGOH COMPLEX
gi|34810528|pdb|1P27|D Chain D, Crystal Structure Of The Human Y14MAGOH COMPLEX
Length = 106
Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 82/102 (80%), Gaps = 1/102 (0%)
Query: 71 NFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGF 129
+++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F EYGEI+N+HLNLDRRTG+
Sbjct: 4 DYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGY 63
Query: 130 VKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
+KGY L+EYE ++EAQ A+ +NG +L+ Q ++VDW F GP
Sbjct: 64 LKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGP 105
>gi|401408199|ref|XP_003883548.1| Rbm28 protein, related [Neospora caninum Liverpool]
gi|325117965|emb|CBZ53516.1| Rbm28 protein, related [Neospora caninum Liverpool]
Length = 163
Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 104/170 (61%), Gaps = 33/170 (19%)
Query: 23 ADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFRE---EADSERHS-------RLADRNF 72
ADVD + R+P + +K KGRG +E E+D R+S RL ++N
Sbjct: 2 ADVDMTVDRRSP--------SVSKSRKQKGRGLKEGGRESDG-RYSGQGGVFERLEEKN- 51
Query: 73 ESLGTDG----------GPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLN 122
GT G G P RS+EGWII+V +HEEAQE+DL F +G+I+NLHLN
Sbjct: 52 ---GTSGANRKDAERSKGAAPARSVEGWIIVVRNLHEEAQEEDLHENFESFGQIKNLHLN 108
Query: 123 LDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPS 172
LDRRTGFVKGYA IEY++FEEA+ A+ M+ +LL QT+ VDWAFS PS
Sbjct: 109 LDRRTGFVKGYAFIEYDSFEEAEAAVKGMDNQQLLGQTVYVDWAFSKPPS 158
>gi|10197630|gb|AAG14951.1|AF182415_1 MDS014 [Homo sapiens]
gi|10436081|gb|AAG16782.1|AF231512_1 RNA binding motif protein 8B [Homo sapiens]
Length = 158
Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 87/117 (74%), Gaps = 4/117 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E S R +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 21 GRGFGSEEGSRARMR---EDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 77
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
EYGEI+N+HLNLDRRTG++KGY L+EYE ++EAQ A+ +NG +L+ Q ++VDW F
Sbjct: 78 AEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCF 134
>gi|47215996|emb|CAF96244.1| unnamed protein product [Tetraodon nigroviridis]
Length = 175
Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 95/121 (78%), Gaps = 4/121 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E + SR+ +++++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFGIEEGA--RSRV-NQDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 93
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
E+GEI+NL+LNLDRRTG++KGYAL+EYE ++EAQ A+ +NG +++ Q+++VDW F G
Sbjct: 94 SEFGEIKNLNLNLDRRTGYLKGYALVEYETYKEAQAAMEGLNGQDMMGQSISVDWGFVRG 153
Query: 171 P 171
P
Sbjct: 154 P 154
>gi|281353333|gb|EFB28917.1| hypothetical protein PANDA_013985 [Ailuropoda melanoleuca]
Length = 168
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 87/117 (74%), Gaps = 4/117 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E S R +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 31 GRGFGSEEGSRARMR---EDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 87
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
EYGEI+N+HLNLDRRTG++KGY L+EYE ++EAQ A+ +NG +L+ Q ++VDW F
Sbjct: 88 AEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCF 144
>gi|225708470|gb|ACO10081.1| RNA-binding protein 8A [Osmerus mordax]
Length = 173
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 93/121 (76%), Gaps = 4/121 (3%)
Query: 48 KKTKGRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDL 106
K+ KGRGF E + SR+ + +++++ DG PGPQRS+EGWI+ VTGVHEEA E+D+
Sbjct: 31 KRRKGRGFGSEEGA--RSRVKE-DYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDI 87
Query: 107 QNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ F E+GEI+NLHLNLDRRTG++KGYAL+EYE ++EAQ A+ +N +++ Q ++VDW
Sbjct: 88 HDKFAEFGEIKNLHLNLDRRTGYLKGYALVEYETYKEAQAAMEGLNAQDMMGQPISVDWG 147
Query: 167 F 167
F
Sbjct: 148 F 148
>gi|229366520|gb|ACQ58240.1| RNA-binding protein 8A [Anoplopoma fimbria]
Length = 173
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 92/121 (76%), Gaps = 4/121 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E + SR+ + +++++ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 35 GRGFGSEEGA--RSRIKE-DYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 91
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
E+GEI+NLHLNLDRRTG++KGYAL+EYE ++EAQ A+ +N +++ Q ++VDW F G
Sbjct: 92 SEFGEIKNLHLNLDRRTGYLKGYALVEYETYKEAQAAMEGLNAQDMMGQPISVDWGFVRG 151
Query: 171 P 171
P
Sbjct: 152 P 152
>gi|229368126|gb|ACQ59043.1| RNA-binding protein 8A [Anoplopoma fimbria]
Length = 175
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 92/121 (76%), Gaps = 4/121 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E + SR+ + +++++ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFGSEEGA--RSRIKE-DYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 93
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
E+GEI+NLHLNLDRRTG++KGYAL+EYE ++EAQ A+ +N +++ Q ++VDW F G
Sbjct: 94 SEFGEIKNLHLNLDRRTGYLKGYALVEYETYKEAQAAMEGLNAQDMMGQPISVDWGFVRG 153
Query: 171 P 171
P
Sbjct: 154 P 154
>gi|126313602|ref|XP_001363861.1| PREDICTED: RNA-binding protein 8A-like [Monodelphis domestica]
gi|395535797|ref|XP_003769907.1| PREDICTED: RNA-binding protein 8A [Sarcophilus harrisii]
Length = 174
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 87/117 (74%), Gaps = 4/117 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E S R +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFGSEEGSRARMR---EDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 93
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
EYGEI+N+HLNLDRRTG++KGY L+EYE ++EAQ A+ +NG +++ Q ++VDW F
Sbjct: 94 AEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDMMGQPISVDWCF 150
>gi|353240599|emb|CCA72461.1| related to Y14, exon junction complex [Piriformospora indica DSM
11827]
Length = 165
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 99/152 (65%), Gaps = 4/152 (2%)
Query: 45 GAPKKTKGRGFREEADSE-RHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQE 103
G K KGRGF+ + E R + ES T RS+EGWI++VT VHEEA E
Sbjct: 17 GGNIKRKGRGFKSRSQGETRETEHEYDRLESKDTSESQRAARSVEGWIVMVTNVHEEATE 76
Query: 104 DDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTV 163
++L + F ++GEI+NLHLNLDRRTG+VKGYAL+EYE EA+ AI +NG ++L QT++
Sbjct: 77 EELNDKFADFGEIKNLHLNLDRRTGYVKGYALVEYETHREAKAAIDGLNGQDILGQTVSC 136
Query: 164 DWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
D+AF P+ G +R N R GR RS SP RR
Sbjct: 137 DFAFVRPPAGG--QRGNRREGRK-RSASPGRR 165
>gi|350535727|ref|NP_001232210.1| putative RNA-binding protein 8A [Taeniopygia guttata]
gi|197127894|gb|ACH44392.1| putative RNA-binding protein 8A [Taeniopygia guttata]
Length = 174
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 87/117 (74%), Gaps = 4/117 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E S R +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFGSEEGSRARVR---EDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDVHDRF 93
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
E+GEI+N+HLNLDRRTG++KGY L+EYE ++EAQ A+ +NG EL+ Q ++VDW F
Sbjct: 94 AEFGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMAGLNGQELMGQPVSVDWCF 150
>gi|402594614|gb|EJW88540.1| RNA-binding protein 8A [Wuchereria bancrofti]
Length = 159
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 109/182 (59%), Gaps = 27/182 (14%)
Query: 1 MANAEVDALDFEDDDLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEAD 60
MA D+++ +DD M+ + T +D LKS +T K KGRGF
Sbjct: 1 MAAVTGDSIEVDDD--MELEHTDQID----------DLKSRVT-----KKKGRGF----G 39
Query: 61 SERHSRLADRNFESLGTDGGP----GPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEI 116
E H+ + + +E L + GG PQRS+EGWI+ VT VHEEA EDD+ F EYGEI
Sbjct: 40 GETHADVTE--YEGLESAGGANNPNAPQRSVEGWIVFVTNVHEEAHEDDVYERFSEYGEI 97
Query: 117 RNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPF 176
+N++LN+DRRTGF+KGYAL+EYE +EA +AI +NG ELL QT+ V W F G +
Sbjct: 98 KNMNLNIDRRTGFLKGYALVEYETQKEALSAIEGLNGTELLGQTINVSWCFVRGSAQKKR 157
Query: 177 KR 178
+R
Sbjct: 158 RR 159
>gi|156403590|ref|XP_001639991.1| predicted protein [Nematostella vectensis]
gi|156227123|gb|EDO47928.1| predicted protein [Nematostella vectensis]
Length = 91
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 75/87 (86%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
++EGWI+ VT +HEEAQEDD+ +F +YGEI+NLH+NLDRRTGF+KGYAL+EYE F+EAQ
Sbjct: 1 AVEGWILFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQ 60
Query: 146 NAITAMNGGELLTQTLTVDWAFSNGPS 172
+A+ A+NG E+L Q ++VDWAF GPS
Sbjct: 61 SALEALNGAEMLGQNISVDWAFIRGPS 87
>gi|83320121|ref|NP_001030401.1| RNA-binding protein 8A [Bos taurus]
gi|162287294|ref|NP_080151.2| RNA-binding protein 8A isoform b [Mus musculus]
gi|297279807|ref|XP_002801796.1| PREDICTED: RNA-binding protein 8A-like [Macaca mulatta]
gi|7158824|gb|AAF37551.1|AF198620_1 RNA binding motif protein 8 [Homo sapiens]
gi|10436078|gb|AAG16781.1|AF231511_1 RNA binding motif protein 8A [Homo sapiens]
gi|12845611|dbj|BAB26820.1| unnamed protein product [Mus musculus]
gi|18044867|gb|AAH20086.1| RNA binding motif protein 8a [Mus musculus]
gi|37231642|gb|AAH58376.1| RNA binding motif protein 8a [Mus musculus]
gi|73586970|gb|AAI02485.1| RNA binding motif protein 8A [Bos taurus]
gi|148706953|gb|EDL38900.1| RNA binding motif protein 8a [Mus musculus]
gi|296489520|tpg|DAA31633.1| TPA: RNA-binding protein 8A [Bos taurus]
Length = 173
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 86/117 (73%), Gaps = 5/117 (4%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E R +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFGSEGSRARMRE----DYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 92
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
EYGEI+N+HLNLDRRTG++KGY L+EYE ++EAQ A+ +NG +L+ Q ++VDW F
Sbjct: 93 AEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCF 149
>gi|251757447|sp|Q9CWZ3.3|RBM8A_MOUSE RecName: Full=RNA-binding protein 8A; AltName: Full=RNA-binding
motif protein 8A; AltName: Full=Ribonucleoprotein RBM8A
Length = 174
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 87/117 (74%), Gaps = 4/117 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF + S R +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFGSKEGSRARMR---EDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 93
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
EYGEI+N+HLNLDRRTG++KGY L+EYE ++EAQ A+ +NG +L+ Q ++VDW F
Sbjct: 94 AEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCF 150
>gi|90085331|dbj|BAE91406.1| unnamed protein product [Macaca fascicularis]
Length = 174
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 87/117 (74%), Gaps = 4/117 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E S R +++S+ DG PGPQRS+EGWI+ VTGVHE+A E+D+ + F
Sbjct: 37 GRGFGSEEGSRARMR---EDYDSVEQDGDEPGPQRSVEGWILFVTGVHEKATEEDIHDKF 93
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
EYGEI+N+HLNLDRRTG++KGY L+EYE ++EAQ A+ +NG +L+ Q ++VDW F
Sbjct: 94 AEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCF 150
>gi|60826737|gb|AAX36769.1| RNA binding motif protein 8A [synthetic construct]
Length = 175
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 86/117 (73%), Gaps = 4/117 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E S R +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFGSEEGSRARMR---EDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 93
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
EYGEI+N+HLNLDRRTG++KGY L+EYE ++EAQ + +NG +L+ Q ++VDW F
Sbjct: 94 AEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAVMEGLNGQDLMGQPISVDWCF 150
>gi|49456603|emb|CAG46622.1| RBM8A [Homo sapiens]
Length = 174
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 86/117 (73%), Gaps = 4/117 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E S R +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFGSEEGSRARMR---EDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 93
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
EYGEI+N+HLNLDRRTG++KGY L+EYE ++EAQ + +NG +L+ Q ++VDW F
Sbjct: 94 AEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAVMEGLNGQDLMGQPISVDWCF 150
>gi|12845066|dbj|BAB26605.1| unnamed protein product [Mus musculus]
Length = 173
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 86/117 (73%), Gaps = 5/117 (4%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E R +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFGSEGSRARMRE----DYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 92
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
EYGEI+N+HLNLDRRTG++KGY L+EYE ++EAQ A+ +NG +L+ Q ++VDW F
Sbjct: 93 AEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCF 149
>gi|16797818|gb|AAL29185.1|AF173550_1 Tsunagi [Drosophila melanogaster]
Length = 165
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 92/140 (65%), Gaps = 10/140 (7%)
Query: 47 PKKTKGRGFREEADSERHSRLADRNFESLGTDGG----PGPQRSIEGWIILVTGVHEEAQ 102
K KGRGF S+ ++R A ++E + + PGPQRS+EGWI+ VT +HEEAQ
Sbjct: 30 AKHRKGRGF----GSDSNTREAIHSYERVRNEDDDELEPGPQRSVEGWILFVTSIHEEAQ 85
Query: 103 EDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLT 162
D++Q F +YGEI+N+HLNLDRRTGF KGYAL+EYE ++A A A+ G E++ QT+
Sbjct: 86 GDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALRGAEIMGQTIQ 145
Query: 163 VDWAFSNGPSTGPFKRKNMR 182
VDW F GP K+ MR
Sbjct: 146 VDWCFVKGPKR--VKKSEMR 163
>gi|453086802|gb|EMF14844.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 169
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 82/113 (72%), Gaps = 2/113 (1%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWII+VT VHEEA E+D+Q++FGEYG+I+NLH+NLDRRTG+VKGY LIEY +EA
Sbjct: 50 RSIEGWIIIVTNVHEEASEEDIQDMFGEYGDIKNLHMNLDRRTGYVKGYVLIEYPTLDEA 109
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSP--RRR 195
+ AI +G ELL QT+ VD+AF P + K R G RS SP RRR
Sbjct: 110 KAAIQDADGKELLEQTIGVDYAFVRPPPSKGAPPKGQRKGGRERSASPGARRR 162
>gi|452820405|gb|EME27448.1| RNA-binding protein 8A isoform 1 [Galdieria sulphuraria]
Length = 156
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
Query: 43 TGGAPKKTKGRGFREEADSERHSRLADRN--FESLGTD-GGPGPQRSIEGWIILVTGVHE 99
T ++ +GRG D + R + FE LGTD G GPQ+S+EG+I++ +HE
Sbjct: 12 TSKGEERGRGRGIGAAMDVDEEGRYTGKGGVFERLGTDRDGSGPQKSVEGYILIACNLHE 71
Query: 100 EAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQ 159
E E+D+ + F E GE++N+HLNLDRRTGF KGYALIEY++F+EAQ+AI A+NG EL +
Sbjct: 72 ECTEEDIYDKFSELGEVKNIHLNLDRRTGFTKGYALIEYQHFKEAQSAIEALNGAELHDR 131
Query: 160 TLTVDWAFSNGP 171
L V WAFS GP
Sbjct: 132 LLEVSWAFSRGP 143
>gi|156350360|ref|XP_001622249.1| predicted protein [Nematostella vectensis]
gi|156208737|gb|EDO30149.1| predicted protein [Nematostella vectensis]
Length = 88
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 75/87 (86%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
++EGWI+ VT +HEEAQEDD+ +F +YGEI+NLH+NLDRRTGF+KGYAL+EYE F+EAQ
Sbjct: 1 AVEGWILFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQ 60
Query: 146 NAITAMNGGELLTQTLTVDWAFSNGPS 172
+A+ A+NG E+L Q ++VDWAF GPS
Sbjct: 61 SALEALNGAEMLGQNISVDWAFIRGPS 87
>gi|31615830|pdb|1OO0|B Chain B, Crystal Structure Of The Drosophila Mago Nashi-Y14 Complex
Length = 110
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 73/91 (80%)
Query: 81 PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYEN 140
PGPQRS+EGWI+ VT +HEEAQED++Q F +YGEI+N+HLNLDRRTGF KGYAL+EYE
Sbjct: 18 PGPQRSVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYET 77
Query: 141 FEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
++A A A+NG E++ QT+ VDW F GP
Sbjct: 78 HKQALAAKEALNGAEIMGQTIQVDWCFVKGP 108
>gi|358056181|dbj|GAA97921.1| hypothetical protein E5Q_04601 [Mixia osmundae IAM 14324]
Length = 241
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/144 (52%), Positives = 94/144 (65%), Gaps = 10/144 (6%)
Query: 51 KGRGF----REEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDL 106
KGRGF R E + ++ L E+ G G RSIEGWI++VTG+HEE E+DL
Sbjct: 11 KGRGFKSGDRPEDATAQYESLKQDELETAGALGNAA--RSIEGWIVIVTGLHEECSEEDL 68
Query: 107 QNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWA 166
Q+ FG++GEI+NLHLNLDRRTG+VKGYAL+EYE EA+ AI+ +G ELL QTL D+A
Sbjct: 69 QDKFGDFGEIKNLHLNLDRRTGYVKGYALVEYETRAEAEAAISGASGTELLEQTLQCDFA 128
Query: 167 FSNGPSTGPFKRKNMRPGRTHRSR 190
F P P K +P R RSR
Sbjct: 129 FVRPP---PSSEKASKPRRA-RSR 148
>gi|170591857|ref|XP_001900686.1| Snf5 [Brugia malayi]
gi|158591838|gb|EDP30441.1| Snf5, putative [Brugia malayi]
Length = 539
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 108/182 (59%), Gaps = 27/182 (14%)
Query: 1 MANAEVDALDFEDDDLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEAD 60
MA D+++ +DD M+ + T +D LKS +T K KGRGF
Sbjct: 381 MAAVTGDSIEVDDD--MELEHTDQID----------DLKSRVT-----KKKGRGF----G 419
Query: 61 SERHSRLADRNFESLGTDGGP----GPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEI 116
E H+ + + +E L + GG PQRS+EGWI+ VT VHEEA EDD+ F EYGEI
Sbjct: 420 GETHADVTE--YEGLESAGGANNPNAPQRSVEGWIVFVTNVHEEAHEDDVYERFSEYGEI 477
Query: 117 RNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPF 176
+N++LN+DRRTGF+KGYAL+EYE +EA AI +NG ELL QT+ V W F G +
Sbjct: 478 KNMNLNIDRRTGFLKGYALVEYETQKEAFAAIEGLNGAELLGQTINVSWCFVRGSAQKKR 537
Query: 177 KR 178
+R
Sbjct: 538 RR 539
>gi|268321104|gb|ACZ02369.1| y14-like protein [Monopterus albus]
Length = 175
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 91/121 (75%), Gaps = 4/121 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E + SR+ + +++++ DG PGPQRS+EGWI+ VTGV EEA E+D+ + F
Sbjct: 37 GRGFGSEEGA--RSRIKE-DYDTVEQDGDEPGPQRSVEGWILFVTGVQEEATEEDVYDKF 93
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
YGEI+NLHLNLDRRTG++KGYAL+EYE ++EAQ A+ +NG +L+ Q ++VDW F G
Sbjct: 94 SAYGEIKNLHLNLDRRTGYLKGYALVEYETYKEAQAAMEGLNGQDLMGQPISVDWGFVRG 153
Query: 171 P 171
P
Sbjct: 154 P 154
>gi|410904425|ref|XP_003965692.1| PREDICTED: RNA-binding protein 8A-like [Takifugu rubripes]
Length = 173
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 93/121 (76%), Gaps = 4/121 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E + SR+ + +++++ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 35 GRGFGPEEGA--RSRVKE-DYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 91
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
E+GEI+NL+LNLDRRTG++KGYAL+EYE ++EAQ A+ +NG +++ Q ++VDW F G
Sbjct: 92 SEFGEIKNLNLNLDRRTGYLKGYALVEYETYKEAQAAMEGLNGQDMMGQPISVDWGFVRG 151
Query: 171 P 171
P
Sbjct: 152 P 152
>gi|114794628|pdb|2HYI|B Chain B, Structure Of The Human Exon Junction Complex With A
Trapped Dead-Box Helicase Bound To Rna
gi|114794632|pdb|2HYI|H Chain H, Structure Of The Human Exon Junction Complex With A
Trapped Dead-Box Helicase Bound To Rna
Length = 91
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 75/91 (82%)
Query: 81 PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYEN 140
PGPQRS+EGWI+ VTGVHEEA E+D+ + F EYGEI+N+HLNLDRRTG++KGY L+EYE
Sbjct: 1 PGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYET 60
Query: 141 FEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
++EAQ A+ +NG +L+ Q ++VDW F GP
Sbjct: 61 YKEAQAAMEGLNGQDLMGQPISVDWCFVRGP 91
>gi|452003190|gb|EMD95647.1| hypothetical protein COCHEDRAFT_1209936 [Cochliobolus
heterostrophus C5]
Length = 158
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 88/133 (66%), Gaps = 6/133 (4%)
Query: 68 ADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT 127
AD T G RSIEGWII+VT VHEEA E+DLQ++FGE+G ++NLH+NLDRRT
Sbjct: 20 ADPKASDAQTAAGATAVRSIEGWIIIVTNVHEEATEEDLQDMFGEFGTVKNLHMNLDRRT 79
Query: 128 GFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF------SNGPSTGPFKRKNM 181
G+VKGYALIEY +EA+ AI NG ELL Q +TVD+AF S G + +R++
Sbjct: 80 GYVKGYALIEYATLDEAKAAIKGANGEELLEQKVTVDYAFVRPPPASKGRARDHDRRQSG 139
Query: 182 RPGRTHRSRSPRR 194
R RSRSP R
Sbjct: 140 RGAARARSRSPGR 152
>gi|156571886|gb|ABU84871.1| Y14 protein [Taiwanofungus camphoratus]
Length = 168
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 92/153 (60%), Gaps = 4/153 (2%)
Query: 45 GAPKKTKGRGFREEADSERHSRLADRNF---ESLGTDGGPGPQRSIEGWIILVTGVHEEA 101
G + KGRGF+ A + +++ F ESL RS+EGWI+LVT VHEEA
Sbjct: 14 GGVVRRKGRGFQSAAGGNESAVTSEQTFDRVESLQASETRAA-RSVEGWIVLVTNVHEEA 72
Query: 102 QEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTL 161
E+D+ + F EYGEI+NLHLNLDRRTG+VKGYAL+EYE EAQ AI G LL QTL
Sbjct: 73 TEEDVMDKFAEYGEIKNLHLNLDRRTGYVKGYALVEYETMAEAQAAIDGAAGTTLLEQTL 132
Query: 162 TVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRR 194
D+AF P +GP K + S S RR
Sbjct: 133 QCDYAFVRPPPSGPKKGRGREGRGRRASPSCRR 165
>gi|223999999|ref|XP_002289672.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974880|gb|EED93209.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 126
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 73/88 (82%)
Query: 80 GPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYE 139
G GPQRS+EGWI+ VTGVHEEAQEDDL + F E+G ++NLHLNLDR TG KGY L+EY
Sbjct: 29 GSGPQRSVEGWIVFVTGVHEEAQEDDLIDAFSEFGTVKNLHLNLDRHTGMAKGYGLVEYS 88
Query: 140 NFEEAQNAITAMNGGELLTQTLTVDWAF 167
++EEAQ+AI +++G ELL +T+ VDWAF
Sbjct: 89 SYEEAQDAINSLHGTELLGKTIGVDWAF 116
>gi|302686054|ref|XP_003032707.1| hypothetical protein SCHCODRAFT_10999 [Schizophyllum commune H4-8]
gi|300106401|gb|EFI97804.1| hypothetical protein SCHCODRAFT_10999 [Schizophyllum commune H4-8]
Length = 157
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 80/112 (71%), Gaps = 6/112 (5%)
Query: 84 QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEE 143
QRS+EGWII+VT VHEEA E+D+ + F EYGEI+N+HLNLDRRTG+VKGYAL+EYE E
Sbjct: 51 QRSVEGWIIMVTNVHEEATEEDVNDKFAEYGEIKNMHLNLDRRTGYVKGYALVEYETMAE 110
Query: 144 AQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
AQ AI +G LL Q + D+AF P TGP R+N R RS SP RR
Sbjct: 111 AQAAIDGASGSSLLEQVIQCDYAFIRPPPTGP--RRNARG----RSASPTRR 156
>gi|402216482|gb|EJT96569.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 172
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/126 (56%), Positives = 89/126 (70%), Gaps = 3/126 (2%)
Query: 51 KGRGFREEADSE--RHSRLADRNFESLGTDGGPG-PQRSIEGWIILVTGVHEEAQEDDLQ 107
+GRGFRE E R + DR G +G G RS+EGWII VTGVHEEA E+DLQ
Sbjct: 20 RGRGFREGTSGELNRTEQQFDRIDVGGGREGDTGKAARSVEGWIIFVTGVHEEASEEDLQ 79
Query: 108 NVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
+ F ++GEI+NLHLNLDRRTGFVKGYALIEY+ F+EA++A+ A +G LL Q + D+AF
Sbjct: 80 DKFADFGEIKNLHLNLDRRTGFVKGYALIEYDTFKEAKSAVDACDGSTLLEQEIHCDFAF 139
Query: 168 SNGPST 173
+ P T
Sbjct: 140 TKPPPT 145
>gi|145552952|ref|XP_001462151.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429989|emb|CAK94778.1| unnamed protein product [Paramecium tetraurelia]
Length = 132
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 85/119 (71%), Gaps = 6/119 (5%)
Query: 71 NFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFV 130
NF+SL +D GPGP +S+EGWI++ G+HEEAQEDDL + F +YG I+NLHLNLDRRTGFV
Sbjct: 19 NFQSLESDDGPGPMKSVEGWILIAKGIHEEAQEDDLFDAFSKYGPIKNLHLNLDRRTGFV 78
Query: 131 KGYALIEYENFEEAQNAITAMNGGE-LLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHR 188
KGYALIE+ +F AQ+A+ +N + + + + VDWAF P K+ ++P + +
Sbjct: 79 KGYALIEFSDFAHAQDALNGVNKSDGIYGKKVQVDWAFKK-----PCKKGALKPTKKQQ 132
>gi|298708065|emb|CBJ30418.1| RNA-binding protein, putative [Ectocarpus siliculosus]
Length = 192
Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 75/99 (75%)
Query: 72 FESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVK 131
FES+ GPQRS+EGWI+ V VHEEAQEDD+ + F EYG ++NLH+NLDRRTGFVK
Sbjct: 83 FESVDVGSAGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVK 142
Query: 132 GYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
GY L+E+E EEAQ+AI M+G +LL Q ++V WAF G
Sbjct: 143 GYCLVEFEKKEEAQSAIDEMDGSQLLEQDISVSWAFMRG 181
>gi|345565557|gb|EGX48506.1| hypothetical protein AOL_s00080g135 [Arthrobotrys oligospora ATCC
24927]
Length = 147
Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 75/89 (84%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G P P RSIEGWI+LVT VHEEA E+DL ++F E+GE++NLHLNLDRRTG+VKGYAL+EY
Sbjct: 19 GAPVPSRSIEGWIVLVTNVHEEAGEEDLNDLFAEHGEVQNLHLNLDRRTGYVKGYALVEY 78
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWAF 167
EEAQ+AI +++G +LL QT++ DWAF
Sbjct: 79 STKEEAQSAIDSIDGSKLLDQTVSADWAF 107
>gi|409081651|gb|EKM82010.1| hypothetical protein AGABI1DRAFT_112188 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426196884|gb|EKV46812.1| hypothetical protein AGABI2DRAFT_193432 [Agaricus bisporus var.
bisporus H97]
Length = 163
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/124 (56%), Positives = 83/124 (66%), Gaps = 5/124 (4%)
Query: 72 FESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVK 131
ES T RS+EGWI+LVT VHEEA E+D+Q+ F E+GEI+NLHLNLDRRTG+VK
Sbjct: 43 VESTTTGADTRAARSVEGWIVLVTNVHEEATEEDVQDKFAEFGEIKNLHLNLDRRTGYVK 102
Query: 132 GYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRS 191
GY L+EYE EAQ AI +G LL QT+ D+AF P TGP K+ MR RS S
Sbjct: 103 GYTLVEYETMGEAQAAIDGASGTTLLEQTVQCDYAFVRPPPTGP-KKGRMR----GRSAS 157
Query: 192 PRRR 195
P RR
Sbjct: 158 PARR 161
>gi|74143221|dbj|BAE24142.1| unnamed protein product [Mus musculus]
gi|124376520|gb|AAI32652.1| RIKEN cDNA B020018G12 gene [Mus musculus]
gi|124376830|gb|AAI32654.1| RIKEN cDNA B020018G12 gene [Mus musculus]
Length = 174
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 89/117 (76%), Gaps = 4/117 (3%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF + S +R+ + +++S+ D PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFGSKEGS--RARMQE-DYDSVKQDSDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 93
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
EYGEI+N+HLNLDRRTG++KGY L+EYE ++EAQ A+ +NG +L+ Q ++VDW F
Sbjct: 94 AEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCF 150
>gi|393910685|gb|EJD75995.1| hypothetical protein LOAG_16958 [Loa loa]
Length = 159
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 107/182 (58%), Gaps = 27/182 (14%)
Query: 1 MANAEVDALDFEDDDLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEAD 60
MA D+++ +DD M+ + T +D LKS T K KGRGF
Sbjct: 1 MAVVTGDSIEVDDD--MELEHTDQID----------DLKSRAT-----KKKGRGF----G 39
Query: 61 SERHSRLADRNFESLGTDGGP----GPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEI 116
E H+ + + +E L + G PQRS+EGWI+ VT VHEEA EDD+ F EYGEI
Sbjct: 40 GETHADVTE--YEGLESTAGANNPNAPQRSVEGWIVFVTNVHEEAHEDDVYERFSEYGEI 97
Query: 117 RNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPF 176
+N++LN+DRRTGF+KGYAL+EYE +EA AI ++NG ELL QT+ V W F G +
Sbjct: 98 KNMNLNIDRRTGFLKGYALVEYETQKEALAAIESLNGAELLGQTINVSWCFVRGSAQKKR 157
Query: 177 KR 178
+R
Sbjct: 158 RR 159
>gi|217035448|pdb|3EX7|B Chain B, The Crystal Structure Of Ejc In Its Transition State
gi|217035452|pdb|3EX7|G Chain G, The Crystal Structure Of Ejc In Its Transition State
Length = 126
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
Query: 71 NFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGF 129
+++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F EYGEI+N+HLNLDRRTG+
Sbjct: 3 DYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGY 62
Query: 130 VKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
+KGY L+EYE ++EAQ A+ +NG +L+ Q ++VDW F
Sbjct: 63 LKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVDWCF 100
>gi|451856193|gb|EMD69484.1| hypothetical protein COCSADRAFT_77485 [Cochliobolus sativus ND90Pr]
Length = 158
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/133 (52%), Positives = 88/133 (66%), Gaps = 6/133 (4%)
Query: 68 ADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT 127
AD T G RSIEGWII+VT VHEEA E+DLQ++FGE+G ++NLH+NLDRRT
Sbjct: 20 ADPKASDAQTAAGATAVRSIEGWIIIVTNVHEEATEEDLQDMFGEFGTVKNLHMNLDRRT 79
Query: 128 GFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF------SNGPSTGPFKRKNM 181
G+VKGYALIEY +EA+ AI +G ELL Q +TVD+AF S G + +R++
Sbjct: 80 GYVKGYALIEYATLDEAKAAIKGASGEELLEQKVTVDYAFVRPPPASKGRARDHDRRQSG 139
Query: 182 RPGRTHRSRSPRR 194
R RSRSP R
Sbjct: 140 RGAARARSRSPGR 152
>gi|312074485|ref|XP_003139992.1| hypothetical protein LOAG_04407 [Loa loa]
Length = 567
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 107/182 (58%), Gaps = 27/182 (14%)
Query: 1 MANAEVDALDFEDDDLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEAD 60
MA D+++ +DD M+ + T +D LKS T K KGRGF
Sbjct: 409 MAVVTGDSIEVDDD--MELEHTDQID----------DLKSRAT-----KKKGRGF----G 447
Query: 61 SERHSRLADRNFESLGTDGGP----GPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEI 116
E H+ + + +E L + G PQRS+EGWI+ VT VHEEA EDD+ F EYGEI
Sbjct: 448 GETHADVTE--YEGLESTAGANNPNAPQRSVEGWIVFVTNVHEEAHEDDVYERFSEYGEI 505
Query: 117 RNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPF 176
+N++LN+DRRTGF+KGYAL+EYE +EA AI ++NG ELL QT+ V W F G +
Sbjct: 506 KNMNLNIDRRTGFLKGYALVEYETQKEALAAIESLNGAELLGQTINVSWCFVRGSAQKKR 565
Query: 177 KR 178
+R
Sbjct: 566 RR 567
>gi|357114973|ref|XP_003559268.1| PREDICTED: RNA-binding protein 8A-like [Brachypodium distachyon]
Length = 193
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 77/90 (85%)
Query: 82 GPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENF 141
GPQRSIEGWIILV+GV E+A+E DL + F ++G +++LH NL+RRTG+ KGYAL+EYE+F
Sbjct: 78 GPQRSIEGWIILVSGVKEDAEESDLFDAFRDFGRVKDLHFNLERRTGYGKGYALVEYESF 137
Query: 142 EEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
EEA+ AI AMNG +LLT+T+ VDWAF+ GP
Sbjct: 138 EEAKTAIKAMNGRQLLTKTIHVDWAFNRGP 167
>gi|145483481|ref|XP_001427763.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394846|emb|CAK60365.1| unnamed protein product [Paramecium tetraurelia]
Length = 131
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 79/109 (72%), Gaps = 1/109 (0%)
Query: 71 NFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFV 130
NF+SL +D GPGP +S+EGWI++ G+HEEAQEDD+ + F +YG I+NLHLNLDRRTGFV
Sbjct: 19 NFQSLESDDGPGPMKSVEGWILIAKGIHEEAQEDDVFDAFSKYGPIKNLHLNLDRRTGFV 78
Query: 131 KGYALIEYENFEEAQNAITAMNGGE-LLTQTLTVDWAFSNGPSTGPFKR 178
KGYALIE+ F AQ+A+ +N + + + + VDWAF G K+
Sbjct: 79 KGYALIEFSEFAHAQDALNGVNKSDGICGKKIQVDWAFKKPNKKGALKQ 127
>gi|393222180|gb|EJD07664.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 166
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/111 (61%), Positives = 78/111 (70%), Gaps = 1/111 (0%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RS+EGWI+ VT VHEEA E+DL + FGEYGEI+NLHLNLDRRTG+VKGYAL+EYE EA
Sbjct: 56 RSVEGWIVFVTNVHEEATEEDLMDKFGEYGEIKNLHLNLDRRTGYVKGYALVEYETLAEA 115
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
Q AIT G LL Q L D+AF P +GP K+ G RS SP RR
Sbjct: 116 QAAITNATGSTLLEQDLECDFAFVRPPPSGP-KQGGRGRGGRGRSASPGRR 165
>gi|392566624|gb|EIW59800.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 163
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 100/156 (64%), Gaps = 5/156 (3%)
Query: 42 ITGGAPKKTKGRGFREEADSERHSRLADRNFESLGTDGGPGPQ--RSIEGWIILVTGVHE 99
I G + KGRGF+ A +E + +++ F+ L + + RS+EGWI++VTGVHE
Sbjct: 8 IDDGGVVRRKGRGFQSAAGNE-SAVTSEQVFDRLDSTQTSETRAARSVEGWIVMVTGVHE 66
Query: 100 EAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQ 159
EA E+D+ + F E+GEI+NLHLNLDRRTG+VKGYAL+EYE +AQ AI +G +LL Q
Sbjct: 67 EATEEDVTDKFAEFGEIKNLHLNLDRRTGYVKGYALVEYETMADAQAAIDGASGTQLLEQ 126
Query: 160 TLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
++ D+AF P GP +K RS SP RR
Sbjct: 127 SIQCDFAFVRPPPAGP--KKGRGREGRGRSASPSRR 160
>gi|167526983|ref|XP_001747824.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773573|gb|EDQ87211.1| predicted protein [Monosiga brevicollis MX1]
Length = 159
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 89/126 (70%), Gaps = 9/126 (7%)
Query: 49 KTKGRGFREEADSERHSRLADRNFESLGTDGGP-GPQRSIEGWIILVTGVHEEAQEDDLQ 107
K KGRGF+ +++S H L S D P PQRS+EGWI++ +HEEA E+D+
Sbjct: 38 KRKGRGFKSQSNS--HYTL------SATGDASPDAPQRSVEGWIVIARNIHEEAAEEDVL 89
Query: 108 NVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
+ F EYG++RNLHLNLDRRTG+VKGYALIEY++ EEA A+ +G +LL QTL+VDWAF
Sbjct: 90 DKFSEYGDVRNLHLNLDRRTGYVKGYALIEYDSKEEALAAVEKGSGEDLLGQTLSVDWAF 149
Query: 168 SNGPST 173
+G +
Sbjct: 150 VHGKKS 155
>gi|395331695|gb|EJF64075.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 164
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 96/156 (61%), Gaps = 5/156 (3%)
Query: 42 ITGGAPKKTKGRGFREEADSERHSRLADRNFESL--GTDGGPGPQRSIEGWIILVTGVHE 99
I G + KGRGF+ A +E + +++ F+ + G RS+EGWI+LVT VHE
Sbjct: 8 IDDGGVVRRKGRGFQSAAGNE-SAVTSEQVFDRVESGQTSETRAARSVEGWIVLVTNVHE 66
Query: 100 EAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQ 159
EA E+D+ + F EYGEI+NLHLNLDRRTG+VKGYAL+EYE EAQ AI +G LL Q
Sbjct: 67 EATEEDVTDKFAEYGEIKNLHLNLDRRTGYVKGYALVEYETMAEAQAAIDGASGTTLLEQ 126
Query: 160 TLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
L D+AF P GP +K RS SP RR
Sbjct: 127 PLQCDFAFVRPPPAGP--KKGRGREGRGRSASPSRR 160
>gi|449548200|gb|EMD39167.1| Y14 protein [Ceriporiopsis subvermispora B]
Length = 164
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 99/161 (61%), Gaps = 9/161 (5%)
Query: 38 LKSAITGGAPKKTKGRGFREEADSERHSRLADRNFESLGTDGGPG---PQRSIEGWIILV 94
+ A GG ++ KGRGF+ A E + +++ F+ + RS+EGWI+LV
Sbjct: 8 IDDAANGGIVRR-KGRGFQSAAGHE-SAVTSEQTFDRVDESAQAAETRAARSVEGWIVLV 65
Query: 95 TGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGG 154
T VHEEA E+D+ + F E+GEI+NLHLNLDRRTG+VKGYAL+EYE +AQ AI +G
Sbjct: 66 TNVHEEATEEDVMDKFAEFGEIKNLHLNLDRRTGYVKGYALVEYETMADAQAAIEGASGT 125
Query: 155 ELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
LL QTL D+AF P +GP K + RS SP RR
Sbjct: 126 TLLEQTLQCDYAFVRPPPSGPKKGRGG----RGRSASPTRR 162
>gi|289722610|gb|ADD18239.1| U1 small nuclear ribonucleoprotein [Glossina morsitans morsitans]
gi|289743645|gb|ADD20570.1| U1 small nuclear ribonucleoprotein [Glossina morsitans morsitans]
Length = 166
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 48 KKTKGRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQ 107
K KGRGF E +R + PGPQRS+EGWI+ VT +HEEAQED++Q
Sbjct: 31 KHRKGRGFGSETTVRETIHQYERVRHEDDDELEPGPQRSVEGWILFVTNIHEEAQEDEIQ 90
Query: 108 NVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
F +YG+I+N+HLNLDRRTGF KGYAL+EYE ++A A +NG E++ Q + VDW F
Sbjct: 91 EKFCDYGDIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKDNLNGTEIMGQPIQVDWCF 150
Query: 168 SNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
GP R +S RRR
Sbjct: 151 VKGPK------------RVKKSSEKRRR 166
>gi|297603803|ref|NP_001054598.2| Os05g0140500 [Oryza sativa Japonica Group]
gi|255676006|dbj|BAF16512.2| Os05g0140500 [Oryza sativa Japonica Group]
Length = 158
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 82/105 (78%), Gaps = 6/105 (5%)
Query: 48 KKTKGRGFREEADSERHSRLAD----RNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQE 103
+KTKGRGFR++A + R SRLA +F+SLG+DGGPGP RSIEGWI+LVTGVHEEAQE
Sbjct: 56 RKTKGRGFRDDA-APRDSRLAGAGRASDFDSLGSDGGPGPVRSIEGWIVLVTGVHEEAQE 114
Query: 104 DDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
DDL N+F ++G+++NLHLNLDRRTGFVK L +Y N A+
Sbjct: 115 DDLHNIFRDFGQVKNLHLNLDRRTGFVK-VCLFQYCNVSSPVAAL 158
>gi|389745313|gb|EIM86494.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 181
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 100/164 (60%), Gaps = 7/164 (4%)
Query: 37 KLKSAITGGAPKKTKGRGFREEADSERHSRL--ADRNFESLGTDGGPG---PQRSIEGWI 91
K +S I GG +K +GRGF+ + + A++ ++ + + P RS+EGWI
Sbjct: 19 KWRSRIVGGTVRK-RGRGFQNAGAYGGNEKGLGAEQTYDRVESTTAPADTRAARSVEGWI 77
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+LVT VHEEA E+D+ F +YGEI+NLHLNLDRRTG+VKGYAL+EYE EAQ AI
Sbjct: 78 VLVTNVHEEATEEDVNEKFADYGEIKNLHLNLDRRTGYVKGYALVEYETMAEAQAAIDGA 137
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
+G LL Q L D+AF P TGP K+ RS SP RR
Sbjct: 138 SGTTLLEQQLQCDYAFVRPPPTGP-KKGRGGREGRGRSASPGRR 180
>gi|145529682|ref|XP_001450624.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418246|emb|CAK83227.1| unnamed protein product [Paramecium tetraurelia]
Length = 441
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 76/98 (77%), Gaps = 1/98 (1%)
Query: 71 NFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFV 130
NF+SL +D GPGP +SIEGWI++V G+HEEAQEDD+ + F +YG I+NLHLNLDRRTGFV
Sbjct: 302 NFQSLESDDGPGPMKSIEGWIVIVKGIHEEAQEDDVFDAFSKYGPIKNLHLNLDRRTGFV 361
Query: 131 KGYALIEYENFEEAQNAITAMNGGE-LLTQTLTVDWAF 167
KGYAL+E+ + A +AI +N E + + + VDWAF
Sbjct: 362 KGYALVEFNEYTHASDAINGINKSEGICGKKVQVDWAF 399
>gi|396459954|ref|XP_003834589.1| hypothetical protein LEMA_P067320.1 [Leptosphaeria maculans JN3]
gi|312211139|emb|CBX91224.1| hypothetical protein LEMA_P067320.1 [Leptosphaeria maculans JN3]
Length = 162
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 84/124 (67%), Gaps = 6/124 (4%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G RSIEGWII+VT VHEEA E+D+Q++FGE+G I+NLH+NLDRRTG+VKGYALI
Sbjct: 31 TAAGATAVRSIEGWIIIVTNVHEEATEEDVQDLFGEFGTIKNLHMNLDRRTGYVKGYALI 90
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPF------KRKNMRPGRTHRSR 190
E+ +EA+ AI NG ELL Q +TVD+AF P +R++ R RSR
Sbjct: 91 EFPTMDEAKAAIKGANGQELLEQKITVDFAFVRPPPAAKSRARDHDRRQSGRGAGRARSR 150
Query: 191 SPRR 194
SP R
Sbjct: 151 SPGR 154
>gi|256070790|ref|XP_002571725.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|360043151|emb|CCD78563.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 143
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 80/104 (76%), Gaps = 3/104 (2%)
Query: 72 FESLGTDGGP---GPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTG 128
+ESL D G GPQRS+EGWI+ V V EEA E+D+++ F EYG+I+N+HLNLDRRTG
Sbjct: 16 YESLVVDDGSSKSGPQRSVEGWILFVRNVQEEATEEDIRDKFCEYGDIKNIHLNLDRRTG 75
Query: 129 FVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPS 172
++KGYAL+EYENF+EA A+ +NG EL Q + VDWAF+ GP+
Sbjct: 76 YLKGYALVEYENFKEAFTAMEHLNGSELNGQRILVDWAFTKGPN 119
>gi|268574300|ref|XP_002642127.1| C. briggsae CBR-RNP-4 protein [Caenorhabditis briggsae]
Length = 142
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 82/127 (64%), Gaps = 3/127 (2%)
Query: 47 PKKTKGRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDL 106
+K+KGRG A + ++ + T GPQRS+EGWI+ VT +HEEA EDD+
Sbjct: 15 AEKSKGRGL---AQTRNREKITYDVVDEESTAASGGPQRSVEGWIVFVTNIHEEATEDDV 71
Query: 107 QNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ F EYG+I+N+HLNLDRRTGF+KGYAL+EYE +EA AI N +LL Q + VDW
Sbjct: 72 HDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEASEAIEKSNDTDLLGQNVKVDWC 131
Query: 167 FSNGPST 173
F G T
Sbjct: 132 FIKGKKT 138
>gi|189209523|ref|XP_001941094.1| RNA-binding protein 8A [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977187|gb|EDU43813.1| RNA-binding protein 8A [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 153
Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 83/124 (66%), Gaps = 6/124 (4%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T+ G RSIEGWII+V VHEEA E+DL ++FGE+G IRNLH+NLDRRTG+VKGY LI
Sbjct: 22 TEAGATAVRSIEGWIIIVANVHEEATEEDLHDMFGEFGTIRNLHMNLDRRTGYVKGYVLI 81
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPF------KRKNMRPGRTHRSR 190
EY +EA+ AI NG ELL QT+ VD+AF P T +R++ R RSR
Sbjct: 82 EYATLDEAKAAIKGANGKELLEQTVAVDFAFVRPPPTTKGRSRDHDRRQSGRGAGRARSR 141
Query: 191 SPRR 194
SP R
Sbjct: 142 SPGR 145
>gi|393236152|gb|EJD43702.1| Y14 protein [Auricularia delicata TFB-10046 SS5]
Length = 161
Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 98/155 (63%), Gaps = 7/155 (4%)
Query: 44 GGAPKKTKGRGFRE-EADSERHSRLADRNFESLGTDGGPGPQ--RSIEGWIILVTGVHEE 100
G K +GRGF+ + D+ + DR + T G + RS+EGWI++VT VHEE
Sbjct: 11 GAGVVKRRGRGFKSADNDAMDTADAYDRIDPAAATKEGDTGKAARSVEGWIVMVTNVHEE 70
Query: 101 AQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQT 160
A E+D+ + F EYG+I+NLHLNLDRRTG+VKGYAL+EYE + EA+ AI NG L Q
Sbjct: 71 ATEEDVHDRFAEYGDIKNLHLNLDRRTGYVKGYALVEYETYAEAKRAIDEANGAPFLEQN 130
Query: 161 LTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
L D+AF P +GP R N R GR RS SP RR
Sbjct: 131 LKADFAFVRAPPSGP--RIN-RHGRG-RSASPGRR 161
>gi|324527854|gb|ADY48852.1| RNA-binding protein 8A [Ascaris suum]
Length = 165
Score = 132 bits (331), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 95/143 (66%), Gaps = 12/143 (8%)
Query: 38 LKSAITGGAPKKTKGRGFREEADSERHSRLADRNFESLGTDGGP-GPQRSIEGWIILVTG 96
+KS +T K KGRGF E H+ +AD +E+L +G PQRS+EGWI+ VT
Sbjct: 33 MKSRVT-----KKKGRGF----GGETHADVAD--YEALDGEGAATAPQRSVEGWIVFVTN 81
Query: 97 VHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGEL 156
VHEEA ED++ + F E+G+I+N++LN+DRRTGF+KGYAL+EYE +EA AI +NG +
Sbjct: 82 VHEEAHEDEVCDRFAEFGDIKNINLNIDRRTGFLKGYALVEYETQKEALAAIEGLNGTKF 141
Query: 157 LTQTLTVDWAFSNGPSTGPFKRK 179
L QT+ V W F G + K++
Sbjct: 142 LGQTINVGWCFVRGSAAQSKKKR 164
>gi|295982199|pdb|2XB2|D Chain D, Crystal Structure Of The Core Mago-Y14-Eif4aiii-Barentsz-
Upf3b Assembly Shows How The Ejc Is Bridged To The Nmd
Machinery
gi|295982200|pdb|2XB2|Z Chain Z, Crystal Structure Of The Core Mago-Y14-Eif4aiii-Barentsz-
Upf3b Assembly Shows How The Ejc Is Bridged To The Nmd
Machinery
Length = 90
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 73/89 (82%)
Query: 83 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFE 142
PQRS+EGWI+ VTGVHEEA E+D+ + F EYGEI+N+HLNLDRRTG++KGY L+EYE ++
Sbjct: 1 PQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYK 60
Query: 143 EAQNAITAMNGGELLTQTLTVDWAFSNGP 171
EAQ A+ +NG +L+ Q ++VDW F GP
Sbjct: 61 EAQAAMEGLNGQDLMGQPISVDWCFVRGP 89
>gi|452983811|gb|EME83569.1| hypothetical protein MYCFIDRAFT_123012, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 146
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/109 (60%), Positives = 79/109 (72%), Gaps = 1/109 (0%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWII+VT VHEEA E+D+Q++FGEYGEI+NLH+NLDRRTG+VKGY LIEY +EA
Sbjct: 37 RSIEGWIIIVTNVHEEASEEDIQDMFGEYGEIKNLHMNLDRRTGYVKGYVLIEYPTVQEA 96
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKR-KNMRPGRTHRSRSP 192
+ AI NG +LL QT+ VD+AF P T K R G RS SP
Sbjct: 97 KAAIEGANGEQLLEQTIHVDFAFVRPPPTKSNSAPKGGRKGGRDRSASP 145
>gi|116668329|pdb|2J0S|D Chain D, The Crystal Structure Of The Exon Junction Complex At 2.2
A Resolution
Length = 89
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 73/89 (82%)
Query: 83 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFE 142
PQRS+EGWI+ VTGVHEEA E+D+ + F EYGEI+N+HLNLDRRTG++KGY L+EYE ++
Sbjct: 1 PQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYK 60
Query: 143 EAQNAITAMNGGELLTQTLTVDWAFSNGP 171
EAQ A+ +NG +L+ Q ++VDW F GP
Sbjct: 61 EAQAAMEGLNGQDLMGQPISVDWCFVRGP 89
>gi|398412892|ref|XP_003857764.1| hypothetical protein MYCGRDRAFT_101997 [Zymoseptoria tritici
IPO323]
gi|339477649|gb|EGP92740.1| hypothetical protein MYCGRDRAFT_101997 [Zymoseptoria tritici
IPO323]
Length = 158
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 81/112 (72%), Gaps = 1/112 (0%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWI++VT VHEEA E+DLQ++FGEYGEI+N+HLNLDRRTG+VKGY LIEY +EA
Sbjct: 39 RSIEGWIVVVTNVHEEASEEDLQDLFGEYGEIKNIHLNLDRRTGYVKGYVLIEYPTLDEA 98
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGPST-GPFKRKNMRPGRTHRSRSPRRR 195
+ A+ NG +LL QT+ VD+AF P G K R G RSRSP R
Sbjct: 99 KAAVEGANGEKLLEQTIGVDFAFVRPPPVKGSQGPKGGRKGGRQRSRSPGER 150
>gi|388583300|gb|EIM23602.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 156
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 94/153 (61%), Gaps = 5/153 (3%)
Query: 42 ITGGAPKKTKGRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEA 101
+ G A KGRGF + + +R E + D +S+EGW+++VT VHEEA
Sbjct: 8 LDGDAAVNRKGRGFVDGRKNSSRPMEYERLEEGMSFDTKAA--KSVEGWVVIVTNVHEEA 65
Query: 102 QEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTL 161
E+D+Q+ F +YG IRNLHLNLDRRTG+VKGYALIE+EN+E+A+ AI NG ELL Q +
Sbjct: 66 SEEDVQDKFADYGHIRNLHLNLDRRTGYVKGYALIEFENYEDAKKAIDESNGTELLEQAI 125
Query: 162 TVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRR 194
D+AFS P P + + RS SP R
Sbjct: 126 QADFAFSKPP---PGFEPDNDKKKNRRSASPAR 155
>gi|406865452|gb|EKD18494.1| RNA-binding protein 8A [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 150
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 82/112 (73%), Gaps = 2/112 (1%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWIIL+T VHEE+ E+DL +F ++GEI+NLHLNLDRRTG+VKGYALIEY +EA
Sbjct: 35 RSIEGWIILITNVHEESSEEDLNELFADFGEIKNLHLNLDRRTGYVKGYALIEYATLDEA 94
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTH-RSRSPRRR 195
+ AI A++ +LL QT+ VD+AF P G R+ + GR RSRSP R
Sbjct: 95 RKAIDALHNTKLLDQTIEVDFAFVR-PPPGKNSRRPAKGGRARSRSRSPAHR 145
>gi|17554514|ref|NP_497891.1| Protein RNP-4 [Caenorhabditis elegans]
gi|3878950|emb|CAA83626.1| Protein RNP-4 [Caenorhabditis elegans]
Length = 142
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 86/128 (67%), Gaps = 5/128 (3%)
Query: 47 PKKTKGRGFREEADSERHSR-LADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDD 105
++++GRG + + ER + + D ES T G P QRS+EGWI+ VT +HEEA EDD
Sbjct: 15 AERSRGRGLAQSRNRERITYDVVDE--ESSATSGAP--QRSVEGWIVFVTNIHEEATEDD 70
Query: 106 LQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ + F EYG+I+N+HLNLDRRTGF+KGYAL+EYE +EA AI N +LL Q + VDW
Sbjct: 71 VHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQSNDTDLLGQNVKVDW 130
Query: 166 AFSNGPST 173
F G T
Sbjct: 131 CFVKGKKT 138
>gi|308487674|ref|XP_003106032.1| CRE-RNP-4 protein [Caenorhabditis remanei]
gi|308254606|gb|EFO98558.1| CRE-RNP-4 protein [Caenorhabditis remanei]
Length = 142
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 86/128 (67%), Gaps = 5/128 (3%)
Query: 47 PKKTKGRGFREEADSERHSR-LADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDD 105
+K+KGRG + + E+ + D ES T GGP QRS+EGWI+ VT +HEEA EDD
Sbjct: 15 AEKSKGRGLAQARNREKIIYDVVDE--ESTATSGGP--QRSVEGWIVFVTNIHEEATEDD 70
Query: 106 LQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ + F EYG+I+N+HLNLDRRTGF+KGYAL+EYE +EA AI N +LL Q + VDW
Sbjct: 71 VHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIEQSNETDLLGQNVKVDW 130
Query: 166 AFSNGPST 173
F G +
Sbjct: 131 CFIKGKKS 138
>gi|452844998|gb|EME46932.1| hypothetical protein DOTSEDRAFT_125862 [Dothistroma septosporum
NZE10]
Length = 153
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/112 (61%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWI+ VT VHEEA E+DLQ++FGEYGEI+N+H+NLDRRTG+VKGY LIEY EEA
Sbjct: 33 RSIEGWIVTVTNVHEEASEEDLQDLFGEYGEIKNIHINLDRRTGYVKGYVLIEYPTREEA 92
Query: 145 QNAITAMNGGELLTQTLTVDWAFSN-GPSTGPFKRKNMRPGRTHRSRSPRRR 195
AI +NG ELL QT+ VD+AF PS K R G RSRSP R
Sbjct: 93 LAAIEGVNGQELLEQTINVDFAFVRPPPSKNQAGPKGGRKGGRQRSRSPGER 144
>gi|169595382|ref|XP_001791115.1| hypothetical protein SNOG_00429 [Phaeosphaeria nodorum SN15]
gi|111070804|gb|EAT91924.1| hypothetical protein SNOG_00429 [Phaeosphaeria nodorum SN15]
Length = 160
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 84/124 (67%), Gaps = 6/124 (4%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G RSIEGWII+VT VHEEA E+DLQ++FGE+G I+NLH+NLDRRTG+VKGY LI
Sbjct: 30 TAAGATAVRSIEGWIIIVTNVHEEATEEDLQDMFGEFGTIKNLHMNLDRRTGYVKGYVLI 89
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAF------SNGPSTGPFKRKNMRPGRTHRSR 190
EY +EA+ AI N ELL Q +TVD+AF S G + +R++ R RSR
Sbjct: 90 EYPTLDEAKAAIKGANDEELLEQKITVDFAFVRPPPASKGRAREHDRRQSGRGAARARSR 149
Query: 191 SPRR 194
SP R
Sbjct: 150 SPGR 153
>gi|330944459|ref|XP_003306380.1| hypothetical protein PTT_19515 [Pyrenophora teres f. teres 0-1]
gi|311316152|gb|EFQ85542.1| hypothetical protein PTT_19515 [Pyrenophora teres f. teres 0-1]
Length = 153
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 84/124 (67%), Gaps = 6/124 (4%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T+ G RSIEGWII+V VHEEA E+DL ++FGE+G I+NLH+NLDRRTG+VKGY LI
Sbjct: 22 TEAGATAVRSIEGWIIIVANVHEEATEEDLHDMFGEFGTIKNLHMNLDRRTGYVKGYVLI 81
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAF------SNGPSTGPFKRKNMRPGRTHRSR 190
EY +EA+ AI NG ELL QT+ VD+AF + G + +R++ R RSR
Sbjct: 82 EYATLDEAKAAIKGANGKELLEQTVAVDFAFVRPPPATKGRARDHDRRQSGRGAGRARSR 141
Query: 191 SPRR 194
SP R
Sbjct: 142 SPGR 145
>gi|336366750|gb|EGN95096.1| hypothetical protein SERLA73DRAFT_187397 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379428|gb|EGO20583.1| hypothetical protein SERLADRAFT_476912 [Serpula lacrymans var.
lacrymans S7.9]
Length = 171
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/111 (56%), Positives = 77/111 (69%), Gaps = 1/111 (0%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RS+EGWI+LVT VHEEA E+D+ + F E+GEI+NLHLNLDRRTG+VKGYAL+EYE EA
Sbjct: 58 RSVEGWIVLVTNVHEEATEEDVTDKFAEFGEIKNLHLNLDRRTGYVKGYALVEYETMSEA 117
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
Q AI +G LL Q + D+AF P +GP K+ RS SP RR
Sbjct: 118 QAAIDGASGTPLLEQEIQCDYAFVRPPPSGP-KKGRGAREGRGRSASPSRR 167
>gi|361130472|gb|EHL02268.1| putative RNA-binding protein 8A [Glarea lozoyensis 74030]
Length = 144
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 86/125 (68%), Gaps = 6/125 (4%)
Query: 74 SLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGY 133
S+ T G RSIEGWI++VT +HEEA E+DL ++F E+GEI+NLHLNLDRRTG+VKGY
Sbjct: 18 SMATHAGATAVRSIEGWIVIVTNLHEEASEEDLTDLFREFGEIKNLHLNLDRRTGYVKGY 77
Query: 134 ALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRP--GRTH-RSR 190
ALIEY +EA+ AI + +LL QT+ VD+AF P P K K P GR RSR
Sbjct: 78 ALIEYATLDEARAAIDGAHQEKLLEQTIEVDFAFVRPP---PGKAKGRPPPKGRARSRSR 134
Query: 191 SPRRR 195
SP R+
Sbjct: 135 SPARK 139
>gi|118354822|ref|XP_001010672.1| RNA-binding motif protein 8 [Tetrahymena thermophila]
gi|89292439|gb|EAR90427.1| RNA-binding motif protein 8 [Tetrahymena thermophila SB210]
Length = 124
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 75/96 (78%)
Query: 72 FESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVK 131
F SL + G GP +S++GW++ VTG+HEE +D + + FGE+GEI+N HLNLDRR+G+VK
Sbjct: 19 FTSLDNNDGDGPLKSVDGWLLFVTGLHEETTDDQIYDAFGEFGEIKNCHLNLDRRSGYVK 78
Query: 132 GYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
GYAL++YEN + AQ+AI +NG +L + +TVDWAF
Sbjct: 79 GYALVQYENLQHAQDAIKGLNGTTILDRQITVDWAF 114
>gi|403415867|emb|CCM02567.1| predicted protein [Fibroporia radiculosa]
Length = 414
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 86/126 (68%), Gaps = 3/126 (2%)
Query: 44 GGAPKKTKGRGFREEADSERHSRLADRNFESLGTDGG--PGPQRSIEGWIILVTGVHEEA 101
GG ++ KGRGF+ A + +++ F+ + + RS+EGWI++VT VHEEA
Sbjct: 14 GGVVRR-KGRGFQSAAGGNESAVTSEQTFDRVESSQTLETRAARSVEGWIVMVTNVHEEA 72
Query: 102 QEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTL 161
E+D+ + F EYGEI+NLHLNLDRRTG+VKGYAL+EYE EAQ AI + +G LL QTL
Sbjct: 73 TEEDVTDKFAEYGEIKNLHLNLDRRTGYVKGYALVEYETMSEAQAAIDSASGTTLLEQTL 132
Query: 162 TVDWAF 167
D+AF
Sbjct: 133 QCDYAF 138
>gi|341896316|gb|EGT52251.1| CBN-RNP-4 protein [Caenorhabditis brenneri]
Length = 143
Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 84/132 (63%), Gaps = 3/132 (2%)
Query: 47 PKKTKGRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDL 106
+K+KGRG A + ++ + T GPQRS+EGWI+ VT +HEEA EDD+
Sbjct: 15 AEKSKGRGL---AQTRNREKIIYDVVDEESTASTGGPQRSVEGWIVFVTNIHEEATEDDV 71
Query: 107 QNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ F E+G+I+N+HLNLDRRTGF+KGYAL+EYE +EA AI N +LL Q + VDW
Sbjct: 72 HDKFSEFGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIEKSNDTDLLGQNVKVDWC 131
Query: 167 FSNGPSTGPFKR 178
F G + +R
Sbjct: 132 FIKGKKSSGGRR 143
>gi|294887890|ref|XP_002772267.1| RNA-binding protein 8A, putative [Perkinsus marinus ATCC 50983]
gi|239876342|gb|EER04083.1| RNA-binding protein 8A, putative [Perkinsus marinus ATCC 50983]
Length = 142
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 74/102 (72%), Gaps = 1/102 (0%)
Query: 81 PG-PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYE 139
PG P RSIEGW+I +TG+HEE QEDD+ V E+G++RNLHLNLDRRTGFVKGY LIEYE
Sbjct: 41 PGAPARSIEGWVIFLTGLHEETQEDDVMEVAMEFGDVRNLHLNLDRRTGFVKGYCLIEYE 100
Query: 140 NFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
+ EA +AI+ M+G +L +T DWAF P G + + +
Sbjct: 101 SKSEASSAISGMSGKMILETPVTADWAFVRPPPVGSMRGRRL 142
>gi|392589648|gb|EIW78978.1| RNP containing family member [Coniophora puteana RWD-64-598 SS2]
Length = 169
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/111 (56%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RS+EGWI+LVT VHEEA E+D+ + F E+GEI+NLHLNLDRRTG+VKGYAL+EYE EA
Sbjct: 56 RSVEGWIVLVTNVHEEATEEDVTDKFAEFGEIKNLHLNLDRRTGYVKGYALVEYETMAEA 115
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
Q AI + LL Q + D+AF P TGP K+ RS SP RR
Sbjct: 116 QAAIEGASNTPLLEQAIQCDYAFVRPPPTGP-KKGRGGREGRGRSASPSRR 165
>gi|281202262|gb|EFA76467.1| RNA recognition motif-containing protein RRM [Polysphondylium
pallidum PN500]
Length = 270
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 93/155 (60%), Gaps = 9/155 (5%)
Query: 44 GGAPKKT-KGRGFREEADSERHSRLADRN--FESLGTDGG---PG-PQRSIEGWIILVTG 96
G PKK KGRG + ER R A + FESL D PG P +SIEGWI++VT
Sbjct: 33 GVLPKKVMKGRGVIDSI--ERDQRYAGDSGLFESLNQDESLIKPGEPIKSIEGWIVVVTN 90
Query: 97 VHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGEL 156
+H+EAQE DL+++F EYG IRN+HLN DRRTGF KGYALIEYE EA AI EL
Sbjct: 91 IHDEAQESDLRDLFCEYGAIRNMHLNYDRRTGFTKGYALIEYEQESEASAAIKESEKIEL 150
Query: 157 LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRS 191
+ LTVD+AF T P +R RT RS
Sbjct: 151 AGKPLTVDFAFVQSVDTTPTHTIQLRSTRTGGRRS 185
>gi|449303905|gb|EMC99912.1| hypothetical protein BAUCODRAFT_354528 [Baudoinia compniacensis
UAMH 10762]
Length = 191
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/111 (57%), Positives = 78/111 (70%), Gaps = 3/111 (2%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWII+ T VHEEA E+D+Q++FGEYGEI+NLH+NLDRRTG+VKGY LIEY EA
Sbjct: 66 RSIEGWIIIATNVHEEASEEDIQDMFGEYGEIKNLHMNLDRRTGYVKGYVLIEYPTLTEA 125
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRP---GRTHRSRSP 192
+ AI NG +LL QT++VD+AF P + K P G RS SP
Sbjct: 126 KAAIEGANGEKLLDQTISVDFAFVRPPPSKTPGGKGGAPRKSGGRQRSMSP 176
>gi|408396633|gb|EKJ75788.1| hypothetical protein FPSE_03968 [Fusarium pseudograminearum CS3096]
Length = 156
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 76/106 (71%)
Query: 70 RNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGF 129
RN + T RSIEGWII+VT VHEEA E+ LQ++FGEYGEI+N+HLNLDRR+G+
Sbjct: 20 RNESDMQTHTKATAVRSIEGWIIIVTNVHEEADEETLQDLFGEYGEIKNMHLNLDRRSGY 79
Query: 130 VKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGP 175
VKGYALIE+ EEA+ AI N +LL QT++VD+AF P P
Sbjct: 80 VKGYALIEFTTLEEARAAIDGANNQKLLEQTISVDFAFVRPPPGKP 125
>gi|212540516|ref|XP_002150413.1| RNA binding protein (Rbm8A), putative [Talaromyces marneffei ATCC
18224]
gi|210067712|gb|EEA21804.1| RNA binding protein (Rbm8A), putative [Talaromyces marneffei ATCC
18224]
Length = 157
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 73/95 (76%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G RSIEGWII+ T +HEEA E+D+ ++F EYGEI+N +LNLDRRTG+VKGYALI
Sbjct: 26 TQAGAVAVRSIEGWIIIATNIHEEASEEDVTDLFAEYGEIKNFNLNLDRRTGYVKGYALI 85
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
EY EA++AI A+NG +LL QTL+VD+AF P
Sbjct: 86 EYSTLPEARSAIEALNGAKLLDQTLSVDYAFVRPP 120
>gi|114794879|pdb|2J0Q|D Chain D, The Crystal Structure Of The Exon Junction Complex At 3.2
A Resolution
gi|114794882|pdb|2J0Q|G Chain G, The Crystal Structure Of The Exon Junction Complex At 3.2
A Resolution
Length = 109
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 71/85 (83%)
Query: 83 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFE 142
PQRS+EGWI+ VTGVHEEA E+D+ + F EYGEI+N+HLNLDRRTG++KGY L+EYE ++
Sbjct: 1 PQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYK 60
Query: 143 EAQNAITAMNGGELLTQTLTVDWAF 167
EAQ A+ +NG +L+ Q ++VDW F
Sbjct: 61 EAQAAMEGLNGQDLMGQPISVDWCF 85
>gi|344238659|gb|EGV94762.1| RNA-binding protein 8A [Cricetulus griseus]
Length = 171
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 84/117 (71%), Gaps = 7/117 (5%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E S R +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFGSEEGSRARMR---EDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF 93
Query: 111 GEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
EYGEI+N+HLNLDRRTG++K +EYE ++EAQ A+ +NG +L+ Q ++VDW F
Sbjct: 94 AEYGEIKNIHLNLDRRTGYLKA---VEYETYKEAQAAMEGLNGQDLMGQPISVDWCF 147
>gi|440636608|gb|ELR06527.1| hypothetical protein GMDG_02162 [Geomyces destructans 20631-21]
Length = 160
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 80/113 (70%), Gaps = 6/113 (5%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWII+V+ VHEEA E+D+ + F ++GEI+NLHLNLDRRTG+VKGYALIEY +EA
Sbjct: 43 RSIEGWIIIVSNVHEEANEEDITDKFADFGEIKNLHLNLDRRTGYVKGYALIEYPTLDEA 102
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGPSTGPFK--RKNMRPGRTH-RSRSPRR 194
+ A+ NG +LL QT+TVD+ F P P K R GR RSRSP R
Sbjct: 103 RAAVNGANGTKLLDQTVTVDFVFVRPP---PKKGGRAPAAKGRARSRSRSPER 152
>gi|452820404|gb|EME27447.1| RNA-binding protein 8A isoform 2 [Galdieria sulphuraria]
Length = 170
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 90/146 (61%), Gaps = 17/146 (11%)
Query: 43 TGGAPKKTKGRGFREEADSERHSRLADRN--FESLGTD-GGPGPQR-------------- 85
T ++ +GRG D + R + FE LGTD G GPQ+
Sbjct: 12 TSKGEERGRGRGIGAAMDVDEEGRYTGKGGVFERLGTDRDGSGPQKCKKSVFGLYYLCGL 71
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
++EG+I++ +HEE E+D+ + F E GE++N+HLNLDRRTGF KGYALIEY++F+EAQ
Sbjct: 72 AVEGYILIACNLHEECTEEDIYDKFSELGEVKNIHLNLDRRTGFTKGYALIEYQHFKEAQ 131
Query: 146 NAITAMNGGELLTQTLTVDWAFSNGP 171
+AI A+NG EL + L V WAFS GP
Sbjct: 132 SAIEALNGAELHDRLLEVSWAFSRGP 157
>gi|342877560|gb|EGU79010.1| hypothetical protein FOXB_10439 [Fusarium oxysporum Fo5176]
Length = 153
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 76/106 (71%)
Query: 70 RNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGF 129
RN + T RSIEGWII+VT VHEEA E+ LQ++FGEYGEI+N+HLNLDRR+G+
Sbjct: 20 RNESDMQTHTKATAVRSIEGWIIVVTNVHEEADEEALQDLFGEYGEIKNMHLNLDRRSGY 79
Query: 130 VKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGP 175
VKGYALIEY EEA+ AI + +LL QT++VD+AF P P
Sbjct: 80 VKGYALIEYTTLEEARAAIDGAHNQKLLDQTISVDFAFVRPPPGKP 125
>gi|294883900|ref|XP_002771096.1| RNA-binding protein 8A, putative [Perkinsus marinus ATCC 50983]
gi|239874334|gb|EER02912.1| RNA-binding protein 8A, putative [Perkinsus marinus ATCC 50983]
Length = 150
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Query: 81 PG-PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYE 139
PG P RSIEGW+I +TG+HEE QEDD+ V E+G++RNLHLNLDRRTGFVKGY LIEYE
Sbjct: 41 PGAPARSIEGWVIFLTGLHEETQEDDVMEVAMEFGDVRNLHLNLDRRTGFVKGYCLIEYE 100
Query: 140 NFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTG 174
+ EA +AI+ M+G +L +T DWAF P G
Sbjct: 101 SKSEASSAISGMSGKMILETPVTADWAFVRPPPVG 135
>gi|255942931|ref|XP_002562234.1| Pc18g03980 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586967|emb|CAP94622.1| Pc18g03980 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 157
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 79/116 (68%), Gaps = 3/116 (2%)
Query: 68 ADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT 127
+DR+FE T G RSIEGWII+ + +HEEA E+D+ +F EYGEI+N LNLDRRT
Sbjct: 20 SDRSFEPR-TQGNAVAVRSIEGWIIIASNIHEEASEEDVTELFAEYGEIKNFSLNLDRRT 78
Query: 128 GFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRP 183
G+VKGYALIEY EA AI +NG +LL QTL VD+AF P +G K KN P
Sbjct: 79 GYVKGYALIEYSTLPEASEAIQNLNGSKLLEQTLHVDYAFVRPPPSG--KHKNGGP 132
>gi|242801580|ref|XP_002483796.1| RNA binding protein (Rbm8A), putative [Talaromyces stipitatus ATCC
10500]
gi|218717141|gb|EED16562.1| RNA binding protein (Rbm8A), putative [Talaromyces stipitatus ATCC
10500]
Length = 159
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 71/91 (78%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G RSIEGWII+ T +HEEA E+D+ ++F EYGEI+N +LNLDRRTG+VKGYALI
Sbjct: 28 TQAGAVAVRSIEGWIIIATNIHEEASEEDVTDLFAEYGEIKNFNLNLDRRTGYVKGYALI 87
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
EY EA+ AI A+NG +LL QTL+VD+AF
Sbjct: 88 EYSTLPEAKAAIDALNGAKLLDQTLSVDYAF 118
>gi|145347604|ref|XP_001418253.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578482|gb|ABO96546.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 107
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 77/105 (73%), Gaps = 5/105 (4%)
Query: 71 NFESLGTD----GGPG-PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDR 125
+++ +G D GGP P RS++GWI+LVTGVHEEAQEDD+ F ++GEI+NLHLNLDR
Sbjct: 3 DYDVMGDDDADAGGPNDPVRSVQGWIVLVTGVHEEAQEDDVHEAFADFGEIKNLHLNLDR 62
Query: 126 RTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
RTG+VKGYAL+EY+ EAQ AI M+G +L Q + WAF G
Sbjct: 63 RTGYVKGYALVEYDTKAEAQAAIDGMDGETVLDQPVRASWAFVRG 107
>gi|302928249|ref|XP_003054666.1| hypothetical protein NECHADRAFT_75628 [Nectria haematococca mpVI
77-13-4]
gi|256735607|gb|EEU48953.1| hypothetical protein NECHADRAFT_75628 [Nectria haematococca mpVI
77-13-4]
Length = 153
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 75/106 (70%)
Query: 70 RNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGF 129
RN + T RSIEGWII+VT VHEEA E+ LQ++FGE+GEI+N+HLNLDRR+G+
Sbjct: 20 RNESDMQTHAKATAVRSIEGWIIVVTNVHEEADEESLQDIFGEFGEIKNMHLNLDRRSGY 79
Query: 130 VKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGP 175
VKGYALIEY EEA+ AI + +LL QT+ VD+AF P P
Sbjct: 80 VKGYALIEYTTLEEARAAIDGAHETKLLEQTIQVDFAFVRPPPGKP 125
>gi|378727758|gb|EHY54217.1| 26S proteasome regulatory subunit N7 [Exophiala dermatitidis
NIH/UT8656]
Length = 206
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 71/87 (81%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWI++ T +HEEA E+D+ ++FGEYG+I+NLHLNLDRRTG+VKGY LIEY EA
Sbjct: 63 RSIEGWIVVATNIHEEATEEDITDLFGEYGDIKNLHLNLDRRTGYVKGYVLIEYPTQVEA 122
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGP 171
+AI A+NG +LL QT++VD+AF P
Sbjct: 123 ASAIKALNGAKLLDQTISVDYAFVRPP 149
>gi|425769338|gb|EKV07834.1| hypothetical protein PDIP_72120 [Penicillium digitatum Pd1]
gi|425770864|gb|EKV09324.1| hypothetical protein PDIG_62740 [Penicillium digitatum PHI26]
Length = 158
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 80/116 (68%), Gaps = 3/116 (2%)
Query: 68 ADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT 127
+DR+FE T G RSIEGWII+V+ +HEE+ E+D+ +F EYGEI+N LNLDRRT
Sbjct: 21 SDRSFEPR-TQGNAVAVRSIEGWIIIVSNIHEESSEEDVTELFAEYGEIKNFSLNLDRRT 79
Query: 128 GFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRP 183
G+VKGYALIEY EA AI +NG +LL QTL VD+AF P +G K KN P
Sbjct: 80 GYVKGYALIEYSTLPEASEAIQNLNGYKLLEQTLHVDYAFVRPPPSG--KNKNGGP 133
>gi|46120534|ref|XP_385090.1| hypothetical protein FG04914.1 [Gibberella zeae PH-1]
Length = 156
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 76/106 (71%)
Query: 70 RNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGF 129
RN + T RSIEGWII+VT VHEEA E+ LQ++FGEYGEI+N+HLNLDRR+G+
Sbjct: 20 RNESDMQTHTKATAVRSIEGWIIIVTNVHEEADEETLQDLFGEYGEIKNMHLNLDRRSGY 79
Query: 130 VKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGP 175
VKGYALIE+ EEA+ AI + +LL QT++VD+AF P P
Sbjct: 80 VKGYALIEFTTLEEARAAIDGAHNQKLLEQTISVDFAFVRPPPGKP 125
>gi|70989223|ref|XP_749461.1| RNA binding protein (Rbm8A) [Aspergillus fumigatus Af293]
gi|66847092|gb|EAL87423.1| RNA binding protein (Rbm8A), putative [Aspergillus fumigatus Af293]
gi|159128873|gb|EDP53987.1| RNA binding protein (Rbm8A), putative [Aspergillus fumigatus A1163]
Length = 158
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 71/97 (73%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G RSIEGWII+ T +HEEA E+D+ ++F EYGEI+N LNLDRRTG+VKGYALI
Sbjct: 28 TQAGAVAVRSIEGWIIIATNIHEEASEEDVTDLFAEYGEIKNFSLNLDRRTGYVKGYALI 87
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPST 173
EY EA +AI A+NG +LL QT+ VD+AF P +
Sbjct: 88 EYSTLPEASDAIKALNGAKLLDQTIHVDYAFVRPPPS 124
>gi|66808437|ref|XP_637941.1| RNA recognition motif-containing protein RRM [Dictyostelium
discoideum AX4]
gi|60466378|gb|EAL64437.1| RNA recognition motif-containing protein RRM [Dictyostelium
discoideum AX4]
Length = 187
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 86/137 (62%), Gaps = 7/137 (5%)
Query: 44 GGAPKKTKGRGFR--EEADSERHSRLADR--NFESLGTDGGPG---PQRSIEGWIILVTG 96
G P K KGRG + D + R + + F SL DGG P +SIEGWII V
Sbjct: 18 GILPSKIKGRGANNSDSMDIDSSERYSGKGGEFHSLNDDGGDKVGEPLKSIEGWIIFVRN 77
Query: 97 VHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGEL 156
+ EE QE DL ++F EYG+I+N+HLN+DRRTGF KGYALIEYE EA++AI +G EL
Sbjct: 78 IQEEVQEPDLMDIFAEYGQIKNIHLNIDRRTGFTKGYALIEYEKRSEAEDAIKNGSGYEL 137
Query: 157 LTQTLTVDWAFSNGPST 173
L+VDWAF G ++
Sbjct: 138 AGLKLSVDWAFITGNAS 154
>gi|443924719|gb|ELU43703.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 228
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 78/119 (65%), Gaps = 4/119 (3%)
Query: 49 KTKGRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQN 108
+ +GRGFR R + D G G GWI+LVT VHEEA EDD+Q+
Sbjct: 84 RKRGRGFRNPGAGGRTDEPTYDRLDVEHKDAGSGSA----GWIVLVTNVHEEASEDDVQD 139
Query: 109 VFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
F ++GEI+NLHLNLDRRTG+VKGYAL+EYE F EA+NAI +NG +LL Q + D+AF
Sbjct: 140 KFADFGEIKNLHLNLDRRTGYVKGYALVEYETFREAKNAIDKLNGAKLLDQEIQCDFAF 198
>gi|119498265|ref|XP_001265890.1| RNA binding protein (Rbm8A), putative [Neosartorya fischeri NRRL
181]
gi|119414054|gb|EAW23993.1| RNA binding protein (Rbm8A), putative [Neosartorya fischeri NRRL
181]
Length = 158
Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 71/97 (73%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G RSIEGWII+ T +HEEA E+D+ ++F EYGEI+N LNLDRRTG+VKGYALI
Sbjct: 28 TQAGAVAVRSIEGWIIIATNIHEEASEEDVTDLFAEYGEIKNFSLNLDRRTGYVKGYALI 87
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPST 173
EY EA +AI A+NG +LL QT+ VD+AF P +
Sbjct: 88 EYSTLPEASDAIKALNGAKLLDQTIHVDYAFVRPPPS 124
>gi|413950021|gb|AFW82670.1| hypothetical protein ZEAMMB73_813736 [Zea mays]
Length = 189
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 76/98 (77%), Gaps = 3/98 (3%)
Query: 37 KLKSAITGG-APKKTKGRGFREEADSE--RHSRLADRNFESLGTDGGPGPQRSIEGWIIL 93
+L+S I G AP++TKGRGFRE+ +S R SR L + GGPGP +SIEGWI+L
Sbjct: 38 RLRSTIAGDDAPRRTKGRGFREDPNSSATRDSRFGAGGRADLDSLGGPGPIQSIEGWIVL 97
Query: 94 VTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVK 131
VTGVHEEAQEDDLQN F E+G+++NLHLNLDRRTGFVK
Sbjct: 98 VTGVHEEAQEDDLQNAFQEFGQVKNLHLNLDRRTGFVK 135
>gi|121710480|ref|XP_001272856.1| RNA binding protein (Rbm8A), putative [Aspergillus clavatus NRRL 1]
gi|119401006|gb|EAW11430.1| RNA binding protein (Rbm8A), putative [Aspergillus clavatus NRRL 1]
Length = 159
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 71/97 (73%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G RSIEGWII+ T +HEEA E+D+ ++F EYGEI+N LNLDRRTG+VKGYALI
Sbjct: 29 TQAGAVAVRSIEGWIIIATNIHEEASEEDVTDLFAEYGEIKNFSLNLDRRTGYVKGYALI 88
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPST 173
EY EA +AI A+NG +LL QT+ VD+AF P +
Sbjct: 89 EYSTLPEASDAIKALNGTKLLDQTIQVDYAFVRPPPS 125
>gi|303323427|ref|XP_003071705.1| RNA-binding protein 8A , putative [Coccidioides posadasii C735
delta SOWgp]
gi|240111407|gb|EER29560.1| RNA-binding protein 8A , putative [Coccidioides posadasii C735
delta SOWgp]
Length = 210
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 73/97 (75%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G RSIEGWI+L T +HEEA E+D+ ++F +YGEI+N +LNLDRRTG+VKGYALI
Sbjct: 80 TRAGAVAVRSIEGWIVLATNIHEEATEEDVTDLFADYGEIKNFNLNLDRRTGYVKGYALI 139
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPST 173
EY EA+ AI A+NG +LL QT+ VD+AF P++
Sbjct: 140 EYTTLPEAEAAIKALNGTKLLDQTIEVDFAFVRAPAS 176
>gi|326434653|gb|EGD80223.1| RNA-binding protein 8A [Salpingoeca sp. ATCC 50818]
Length = 144
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 73/89 (82%), Gaps = 1/89 (1%)
Query: 80 GPG-PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
PG PQRS+EGWI++VT VHEEAQ+DD+ + F E+G+I+NLHLNLDRRTG+VKGYAL+EY
Sbjct: 41 APGAPQRSVEGWIVIVTNVHEEAQDDDIYDKFTEFGKIKNLHLNLDRRTGYVKGYALVEY 100
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWAF 167
E EEA A++ G E+L Q +TV+WAF
Sbjct: 101 EQQEEAARAVSEGTGQEVLGQEVTVNWAF 129
>gi|296413769|ref|XP_002836581.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630409|emb|CAZ80772.1| unnamed protein product [Tuber melanosporum]
Length = 172
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/98 (60%), Positives = 71/98 (72%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G RSIEGWI+LVT VHEEA E+DLQ+ FGE+G+I+NLHLNLDRRTG+VKGYALI
Sbjct: 30 TAAGAFAVRSIEGWIVLVTNVHEEASEEDLQDRFGEFGDIQNLHLNLDRRTGYVKGYALI 89
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTG 174
E+ EA+ AI N +LL QT+ D+AF P T
Sbjct: 90 EFSTLSEAREAIARTNNTKLLEQTIYSDFAFVRPPPTS 127
>gi|348671084|gb|EGZ10905.1| hypothetical protein PHYSODRAFT_317912 [Phytophthora sojae]
Length = 175
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 71/83 (85%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RS+EGWI+ VTGVHEEAQE+D+ + FGE ++++LHLNLDRR+GFVKGYAL+E+E+FE+A
Sbjct: 77 RSVEGWILFVTGVHEEAQEEDVMDAFGEDAQVKDLHLNLDRRSGFVKGYALVEFEHFEDA 136
Query: 145 QNAITAMNGGELLTQTLTVDWAF 167
+ A+ M+G E+L T+ VDWAF
Sbjct: 137 KAAMERMDGQEILGSTIHVDWAF 159
>gi|225680448|gb|EEH18732.1| VP1-196B11 [Paracoccidioides brasiliensis Pb03]
Length = 162
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 79/115 (68%), Gaps = 13/115 (11%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G RSIEGWI+L T +HEEA E+D+ ++F EYGEI+N +LNLDRRTG+VKGYALI
Sbjct: 31 TQAGAVAVRSIEGWIVLATNIHEEASEEDVTDLFAEYGEIKNFNLNLDRRTGYVKGYALI 90
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRS 191
EY EA+ AI A+NG +LL Q++ VD+AF +RP +++SRS
Sbjct: 91 EYTTLPEAKAAIEALNGAKLLDQSIQVDFAF-------------VRPPPSNKSRS 132
>gi|145520987|ref|XP_001446349.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413826|emb|CAK78952.1| unnamed protein product [Paramecium tetraurelia]
Length = 140
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 78/118 (66%), Gaps = 10/118 (8%)
Query: 71 NFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFV 130
NF+SL +D GPGP +SIEGWI++V G+HEEAQEDD+ + F +YG I+NLHLNLDRRTGFV
Sbjct: 19 NFQSLESDDGPGPMKSIEGWIVIVKGIHEEAQEDDVFDAFSKYGPIKNLHLNLDRRTGFV 78
Query: 131 KGYAL---------IEYENFEEAQNAITAMNGGE-LLTQTLTVDWAFSNGPSTGPFKR 178
KGY +++ + A +AI +N E + + + VDWAF P G K+
Sbjct: 79 KGYNTQLKVIVMHQLKFNEYTHASDAINGINKSEGICGKKVQVDWAFKKPPKKGALKQ 136
>gi|340897418|gb|EGS17008.1| putative RNA binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 174
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 69/87 (79%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWII+VT VHEEA E+ +Q+ FGE+GEIRN+HLNLDRRTG+VKGYALIEY EEA
Sbjct: 49 RSIEGWIIMVTNVHEEADEEAIQDKFGEFGEIRNIHLNLDRRTGYVKGYALIEYATLEEA 108
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGP 171
+ AI + +LL QT+ VD+AF P
Sbjct: 109 RAAIDGAHNTQLLDQTIQVDFAFVRPP 135
>gi|119188991|ref|XP_001245102.1| hypothetical protein CIMG_04543 [Coccidioides immitis RS]
gi|320035178|gb|EFW17120.1| RNA-binding protein 8A [Coccidioides posadasii str. Silveira]
gi|392868005|gb|EAS33728.2| RNA-binding protein 8A [Coccidioides immitis RS]
Length = 156
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 73/97 (75%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G RSIEGWI+L T +HEEA E+D+ ++F +YGEI+N +LNLDRRTG+VKGYALI
Sbjct: 26 TRAGAVAVRSIEGWIVLATNIHEEATEEDVTDLFADYGEIKNFNLNLDRRTGYVKGYALI 85
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPST 173
EY EA+ AI A+NG +LL QT+ VD+AF P++
Sbjct: 86 EYTTLPEAEAAIKALNGTKLLDQTIEVDFAFVRAPAS 122
>gi|407919701|gb|EKG12927.1| hypothetical protein MPH_09919 [Macrophomina phaseolina MS6]
Length = 165
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 70/87 (80%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWII+VT VHEEA E+DL ++FG++GEI+NLHLNLDRRTG+VKGY L+EY EA
Sbjct: 38 RSIEGWIIIVTNVHEEASEEDLTDMFGDFGEIKNLHLNLDRRTGYVKGYVLVEYPTMAEA 97
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGP 171
+ AI +G +LL QT++VD+AF P
Sbjct: 98 KAAIEGADGKKLLDQTISVDFAFVRPP 124
>gi|428672360|gb|EKX73274.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 112
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 74/93 (79%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G P +SIEGWI+LVTGVHEEAQE+D+++VF YG + ++HLNLDRR+G+VKGYAL+EY
Sbjct: 18 GVVNPVKSIEGWIVLVTGVHEEAQEEDVRDVFENYGTVSSVHLNLDRRSGYVKGYALLEY 77
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
++ EEAQ+AI +NG ELL + ++V W F P
Sbjct: 78 KSREEAQSAIDNLNGTELLGKAISVSWVFRETP 110
>gi|145238394|ref|XP_001391844.1| RNA-binding protein 8A [Aspergillus niger CBS 513.88]
gi|134076329|emb|CAK39585.1| unnamed protein product [Aspergillus niger]
gi|350635830|gb|EHA24191.1| hypothetical protein ASPNIDRAFT_199976 [Aspergillus niger ATCC
1015]
Length = 160
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 69/89 (77%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWII+ T +HEEA E+D+ ++F EYGEI+N +LNLDRRTG+VKGYALIEY EA
Sbjct: 38 RSIEGWIIIATNIHEEASEEDVTDLFAEYGEIKNFNLNLDRRTGYVKGYALIEYSTLPEA 97
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGPST 173
AI A+NG +LL QT+ VD+AF P +
Sbjct: 98 SEAIKALNGSKLLDQTIQVDFAFVRPPPS 126
>gi|358390345|gb|EHK39751.1| hypothetical protein TRIATDRAFT_303049 [Trichoderma atroviride IMI
206040]
Length = 149
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 73/102 (71%)
Query: 70 RNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGF 129
RN + T RSIEGWII+VT VHEEA E+ LQ+ FG+YGEI+NLHLNLDRR+G+
Sbjct: 17 RNESEMQTHTKATAVRSIEGWIIIVTNVHEEADEEALQDKFGDYGEIKNLHLNLDRRSGY 76
Query: 130 VKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
VKGYALIEY EEA+ AI + +LL QT+ VD+AF P
Sbjct: 77 VKGYALIEYATLEEARAAIDGAHDTKLLDQTIQVDFAFVRPP 118
>gi|358387846|gb|EHK25440.1| hypothetical protein TRIVIDRAFT_121456, partial [Trichoderma virens
Gv29-8]
Length = 144
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 73/102 (71%)
Query: 70 RNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGF 129
RN + T RSIEGWII+VT VHEEA E+ LQ+ FG+YGEI+NLHLNLDRR+G+
Sbjct: 17 RNESEMQTHTKATAVRSIEGWIIIVTNVHEEADEEALQDKFGDYGEIKNLHLNLDRRSGY 76
Query: 130 VKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
VKGYALIEY EEA+ AI + +LL QT+ VD+AF P
Sbjct: 77 VKGYALIEYATLEEARAAIDGAHNTKLLDQTVQVDFAFVRPP 118
>gi|115442764|ref|XP_001218189.1| RNA-binding protein 8A [Aspergillus terreus NIH2624]
gi|114188058|gb|EAU29758.1| RNA-binding protein 8A [Aspergillus terreus NIH2624]
Length = 154
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 72/97 (74%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T+ G RSIEGWI++ T +HEEA E+D+ ++F EYGEI+N +LNLDRRTG+VKGYALI
Sbjct: 24 TESGAVAVRSIEGWIVIATNIHEEASEEDVTDLFAEYGEIKNFNLNLDRRTGYVKGYALI 83
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPST 173
EY EA AI A+NG +LL QT+ VD+AF P +
Sbjct: 84 EYSTLPEASEAIKALNGSKLLDQTIHVDFAFVRPPPS 120
>gi|358368797|dbj|GAA85413.1| RNA binding protein [Aspergillus kawachii IFO 4308]
Length = 164
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 68/87 (78%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWII+ T +HEEA E+D+ ++F EYGEI+N +LNLDRRTG+VKGYALIEY EA
Sbjct: 41 RSIEGWIIIATNIHEEASEEDVTDLFAEYGEIKNFNLNLDRRTGYVKGYALIEYSTLPEA 100
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGP 171
AI A+NG +LL QT+ VD+AF P
Sbjct: 101 SEAIKALNGSKLLDQTIQVDFAFVRPP 127
>gi|325183830|emb|CCA18288.1| RNA binding protein putative [Albugo laibachii Nc14]
gi|325183980|emb|CCA18438.1| RNA binding protein putative [Albugo laibachii Nc14]
Length = 204
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
+SIEGWI+ VTG+HEEAQE+D+ + FGE+ +++N+H+NLDRRTGFVKGYAL+E+E+F+ A
Sbjct: 103 KSIEGWILFVTGIHEEAQEEDVLDAFGEHAQVKNIHMNLDRRTGFVKGYALLEFEDFDAA 162
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGPS-TGPFKRKN 180
+ A+ M+ E+L Q ++V+WAF S P +R N
Sbjct: 163 KEAMNRMDEKEILGQKISVNWAFQKDKSGEKPSRRGN 199
>gi|258576109|ref|XP_002542236.1| RNA-binding protein 8A [Uncinocarpus reesii 1704]
gi|237902502|gb|EEP76903.1| RNA-binding protein 8A [Uncinocarpus reesii 1704]
Length = 156
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 71/95 (74%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G RSIEGWI+L T +HEEA E+D+ ++F +YGEI+N +LNLDRRTG+VKGYALI
Sbjct: 26 TRAGAVAVRSIEGWIVLATNIHEEATEEDVTDLFADYGEIKNFNLNLDRRTGYVKGYALI 85
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
EY EA+ AI A+NG +LL QTL VD+AF P
Sbjct: 86 EYTTLPEAEAAIKALNGAKLLDQTLDVDFAFVRPP 120
>gi|367051903|ref|XP_003656330.1| hypothetical protein THITE_2120778 [Thielavia terrestris NRRL 8126]
gi|347003595|gb|AEO69994.1| hypothetical protein THITE_2120778 [Thielavia terrestris NRRL 8126]
Length = 176
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/87 (64%), Positives = 68/87 (78%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWI++VT VHEE E+ + + FGE+GEIRN+HLNLDRRTG+VKGYALIEY EEA
Sbjct: 46 RSIEGWIVMVTNVHEETDEEAIHDKFGEFGEIRNVHLNLDRRTGYVKGYALIEYTTLEEA 105
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGP 171
+ AI NG +LL QT+ VD+AF P
Sbjct: 106 RAAIDGANGTQLLDQTVQVDFAFVRPP 132
>gi|344235921|gb|EGV92024.1| RNA-binding protein 8A [Cricetulus griseus]
Length = 179
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 75/102 (73%), Gaps = 1/102 (0%)
Query: 71 NFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGF 129
+++S+ DG P Q S+EGWI+ VTGV EEA E+D+ + F EYGEI+N+HLNLDR G+
Sbjct: 58 DYDSVEQDGNEPRTQPSVEGWILFVTGVQEEATEEDIHDKFAEYGEIKNIHLNLDRHIGY 117
Query: 130 VKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
+KGY L+EYE ++EAQ A+ +NG L+ Q +++DW F GP
Sbjct: 118 LKGYILVEYETYKEAQAAMEGLNGQYLMRQPISIDWCFVPGP 159
>gi|354489378|ref|XP_003506840.1| PREDICTED: RNA-binding protein 8A-like [Cricetulus griseus]
Length = 174
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 75/102 (73%), Gaps = 1/102 (0%)
Query: 71 NFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGF 129
+++S+ DG P Q S+EGWI+ VTGV EEA E+D+ + F EYGEI+N+HLNLDR G+
Sbjct: 53 DYDSVEQDGNEPRTQPSVEGWILFVTGVQEEATEEDIHDKFAEYGEIKNIHLNLDRHIGY 112
Query: 130 VKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
+KGY L+EYE ++EAQ A+ +NG L+ Q +++DW F GP
Sbjct: 113 LKGYILVEYETYKEAQAAMEGLNGQYLMRQPISIDWCFVPGP 154
>gi|261196824|ref|XP_002624815.1| RNA-binding protein 8A [Ajellomyces dermatitidis SLH14081]
gi|239596060|gb|EEQ78641.1| RNA-binding protein 8A [Ajellomyces dermatitidis SLH14081]
gi|239609642|gb|EEQ86629.1| RNA-binding protein 8A [Ajellomyces dermatitidis ER-3]
gi|327355650|gb|EGE84507.1| RNA-binding protein 8A [Ajellomyces dermatitidis ATCC 18188]
Length = 161
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 72/97 (74%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G RSIEGWI+L T +HEEA E+D+ ++F EYGEI+N +LNLDRRTG+VKGYALI
Sbjct: 31 TQAGAVAVRSIEGWIVLATNIHEEASEEDVTDLFAEYGEIKNFNLNLDRRTGYVKGYALI 90
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPST 173
EY EA+ AI A+NG +LL Q++ VD+AF P +
Sbjct: 91 EYTTLPEAKAAIEALNGAKLLDQSIQVDFAFVRPPPS 127
>gi|328872552|gb|EGG20919.1| RNA recognition motif-containing protein RRM [Dictyostelium
fasciculatum]
Length = 211
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 90/149 (60%), Gaps = 6/149 (4%)
Query: 44 GGAPKKTKGRGFREEADSERHSRLA--DRNFESLG---TDGGPG-PQRSIEGWIILVTGV 97
G P + KGRG + + + SR A D F+ L D PG P +SIEGWI+++ +
Sbjct: 30 GVLPSRQKGRGHDDSEERDTDSRYAGSDGVFQVLDKQEVDITPGEPIKSIEGWIVIIDNI 89
Query: 98 HEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELL 157
HEEAQE DL+++F EYG IRN+HLN DRRTGF KGYALIEYE +EA+ A+ +L
Sbjct: 90 HEEAQESDLRDLFAEYGPIRNIHLNYDRRTGFSKGYALIEYEKHQEAEEAVKQSGKIQLA 149
Query: 158 TQTLTVDWAFSNGPSTGPFKRKNMRPGRT 186
+ LTV+W F G T + R R+
Sbjct: 150 GKDLTVNWTFVGGKPTSATGVIHFRTNRS 178
>gi|301107528|ref|XP_002902846.1| RNA binding protein, putative [Phytophthora infestans T30-4]
gi|262097964|gb|EEY56016.1| RNA binding protein, putative [Phytophthora infestans T30-4]
Length = 166
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 71/83 (85%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RS+EGW++ VTGVHEEAQE+D+ + FGE ++++LHLNLDRR+GFVKGYAL+E+E+FE+A
Sbjct: 68 RSVEGWLLFVTGVHEEAQEEDVMDAFGEDAQVKDLHLNLDRRSGFVKGYALVEFEHFEDA 127
Query: 145 QNAITAMNGGELLTQTLTVDWAF 167
+ A+ ++G E+L T+ VDWAF
Sbjct: 128 KAAMERLDGQEILGSTIHVDWAF 150
>gi|85001267|ref|XP_955352.1| RNA-binding protein [Theileria annulata strain Ankara]
gi|65303498|emb|CAI75876.1| RNA-binding protein, putative [Theileria annulata]
Length = 98
Score = 122 bits (305), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 72/96 (75%)
Query: 78 DGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIE 137
+G P +SIEGW+ILVTG+HEEAQE+D++ F YG + NLHLNLDRRTG+VKGYAL+E
Sbjct: 3 NGTEVPIKSIEGWVILVTGIHEEAQEEDVREAFENYGTVTNLHLNLDRRTGYVKGYALLE 62
Query: 138 YENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPST 173
++N EA++AIT +NG LL + ++V W F P
Sbjct: 63 FKNRNEAESAITNLNGSHLLGKQISVSWVFRETPQV 98
>gi|367018138|ref|XP_003658354.1| hypothetical protein MYCTH_2294008 [Myceliophthora thermophila ATCC
42464]
gi|347005621|gb|AEO53109.1| hypothetical protein MYCTH_2294008 [Myceliophthora thermophila ATCC
42464]
Length = 188
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/87 (64%), Positives = 68/87 (78%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWI++VT VHEEA E+ + + FGE+GEIRN+HLNLDRRTG+VKGYALIEY EEA
Sbjct: 61 RSIEGWIVMVTNVHEEADEEAIHDKFGEFGEIRNVHLNLDRRTGYVKGYALIEYTTLEEA 120
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGP 171
+ AI N +LL QT+ VD+AF P
Sbjct: 121 RAAIDGANNTDLLGQTVKVDFAFVRPP 147
>gi|156040227|ref|XP_001587100.1| hypothetical protein SS1G_12129 [Sclerotinia sclerotiorum 1980]
gi|154696186|gb|EDN95924.1| hypothetical protein SS1G_12129 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 152
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 70/94 (74%)
Query: 74 SLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGY 133
S+ T RSIEGWII+VT VHEEA E+DL + F ++GEI+NLHLNLDRRTG+VKGY
Sbjct: 25 SMTTHSNATAVRSIEGWIIIVTNVHEEASEEDLNDKFADFGEIKNLHLNLDRRTGYVKGY 84
Query: 134 ALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
ALIEY EEA+ AI + +LL QT+ VD+AF
Sbjct: 85 ALIEYPTLEEARAAIDGAHNTKLLEQTVEVDFAF 118
>gi|241119246|ref|XP_002402515.1| RNA binding domain-containing protein, putative [Ixodes scapularis]
gi|215493312|gb|EEC02953.1| RNA binding domain-containing protein, putative [Ixodes scapularis]
Length = 158
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 93/160 (58%), Gaps = 24/160 (15%)
Query: 15 DLMDEDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEADSERHSRLADRNFES 74
D++D DG D + KLK +K KGRGF ++ +R + +E+
Sbjct: 3 DVLDLDGGEDFEVDEEGDRNVQKLKER-----ARKRKGRGF----GADGTAREDIQEYEA 53
Query: 75 LGTDGG--PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKG 132
+ TD PGPQR + + DD+ F EYGEI+NLHLNLDRRTGF+KG
Sbjct: 54 MDTDENDEPGPQRC-------------KCKLDDIYEKFAEYGEIKNLHLNLDRRTGFLKG 100
Query: 133 YALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPS 172
YAL+EYE F+EAQ AI A+NG ++L QT++VDW F GP+
Sbjct: 101 YALVEYETFKEAQAAIDALNGAKILDQTISVDWCFVKGPT 140
>gi|327296249|ref|XP_003232819.1| hypothetical protein TERG_06808 [Trichophyton rubrum CBS 118892]
gi|326465130|gb|EGD90583.1| hypothetical protein TERG_06808 [Trichophyton rubrum CBS 118892]
Length = 160
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 70/89 (78%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWII+ T +HEEA E+D+ ++F EYG+I+N +LNLDRRTG+VKGYALIEY EA
Sbjct: 34 RSIEGWIIIATNIHEEASEEDVTDLFAEYGDIKNFNLNLDRRTGYVKGYALIEYPTLPEA 93
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGPST 173
+ AI A++G +LL QT+ VD+AF P +
Sbjct: 94 EAAIKALHGAKLLDQTIEVDFAFVRPPPS 122
>gi|315051640|ref|XP_003175194.1| RNA-binding protein 8A [Arthroderma gypseum CBS 118893]
gi|311340509|gb|EFQ99711.1| RNA-binding protein 8A [Arthroderma gypseum CBS 118893]
Length = 160
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 70/89 (78%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWII+ T +HEEA E+D+ ++F EYG+I+N +LNLDRRTG+VKGYALIEY EA
Sbjct: 34 RSIEGWIIIATNIHEEASEEDVTDLFAEYGDIKNFNLNLDRRTGYVKGYALIEYPTLPEA 93
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGPST 173
+ AI A++G +LL QT+ VD+AF P +
Sbjct: 94 EAAIKALHGAKLLDQTIEVDFAFVRPPPS 122
>gi|302503067|ref|XP_003013494.1| transformer-SR ribonucleoprotein, putative [Arthroderma benhamiae
CBS 112371]
gi|291177058|gb|EFE32854.1| transformer-SR ribonucleoprotein, putative [Arthroderma benhamiae
CBS 112371]
Length = 160
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 70/89 (78%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWII+ T +HEEA E+D+ ++F EYG+I+N +LNLDRRTG+VKGYALIEY EA
Sbjct: 34 RSIEGWIIIATNIHEEASEEDVTDLFAEYGDIKNFNLNLDRRTGYVKGYALIEYPTLPEA 93
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGPST 173
+ AI A++G +LL QT+ VD+AF P +
Sbjct: 94 EAAIKALHGAKLLDQTIEVDFAFVRPPPS 122
>gi|238499667|ref|XP_002381068.1| RNA binding protein (Rbm8A), putative [Aspergillus flavus NRRL3357]
gi|220692821|gb|EED49167.1| RNA binding protein (Rbm8A), putative [Aspergillus flavus NRRL3357]
gi|391869313|gb|EIT78512.1| RNA-binding protein RBM8/Tsunagi [Aspergillus oryzae 3.042]
Length = 160
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 70/97 (72%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G RSIEGWI++ T +HEEA E+D+ ++F EYGEI+N +LNLDRRTG+VKGYALI
Sbjct: 30 TQAGAVAVRSIEGWIVIATNIHEEASEEDVTDLFAEYGEIKNFNLNLDRRTGYVKGYALI 89
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPST 173
EY EA AI +NG +LL QT+ VD+AF P +
Sbjct: 90 EYSTLPEATEAIKNLNGTKLLDQTIQVDYAFVRPPPS 126
>gi|392596772|gb|EIW86094.1| hypothetical protein CONPUDRAFT_160947 [Coniophora puteana
RWD-64-598 SS2]
Length = 196
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 88/156 (56%), Gaps = 4/156 (2%)
Query: 42 ITGGAPKKTKGRGFREEA--DSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHE 99
+ G + GRGF+ DS + E+ RS+EGWI+LV VHE
Sbjct: 11 VAAGGAVRCGGRGFQNTGGNDSTVTAEHTYDRVETSHVKDDTRAARSVEGWIVLVITVHE 70
Query: 100 EAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQ 159
EA E+D+ + F ++GEI+NLHLNLDRRTG+VKGYAL+E+E EAQ AI + LL Q
Sbjct: 71 EATEEDVTDKFADFGEIKNLHLNLDRRTGYVKGYALVEHETMAEAQAAIDGASNTPLLEQ 130
Query: 160 TLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
T+ D+AF P TGP +K R R+R R
Sbjct: 131 TIQCDYAFIRLPPTGP--KKGRRESVLTRARHACSR 164
>gi|326474174|gb|EGD98183.1| RNA-binding protein 8A [Trichophyton tonsurans CBS 112818]
gi|326477596|gb|EGE01606.1| RNA-binding protein 8A [Trichophyton equinum CBS 127.97]
Length = 160
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 70/89 (78%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWII+ T +HEEA E+D+ ++F EYG+I+N +LNLDRRTG+VKGYALIEY EA
Sbjct: 34 RSIEGWIIIATNIHEEASEEDVTDLFAEYGDIKNFNLNLDRRTGYVKGYALIEYPTLPEA 93
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGPST 173
+ AI A++G +LL QT+ VD+AF P +
Sbjct: 94 EAAIKALHGAKLLDQTIEVDFAFVRPPPS 122
>gi|310789828|gb|EFQ25361.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 167
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 74/102 (72%)
Query: 70 RNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGF 129
RN + T G RSIEGWII+VT VHEEA E+ + ++FGE+GEI+NLHLNLDRR+G+
Sbjct: 25 RNESEMQTHGRATAVRSIEGWIIMVTNVHEEADEEAIHDMFGEFGEIKNLHLNLDRRSGY 84
Query: 130 VKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
VKGYALIEY EA+ AI + + +LL QT+ VD+AF P
Sbjct: 85 VKGYALIEYATLAEARAAIDSAHETKLLDQTVYVDFAFVRPP 126
>gi|67535587|ref|XP_662109.1| hypothetical protein AN4505.2 [Aspergillus nidulans FGSC A4]
gi|40741658|gb|EAA60848.1| hypothetical protein AN4505.2 [Aspergillus nidulans FGSC A4]
gi|259482671|tpe|CBF77373.1| TPA: RNA binding protein (Rbm8A), putative (AFU_orthologue;
AFUA_2G03260) [Aspergillus nidulans FGSC A4]
Length = 158
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 68/95 (71%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G RSIEGWII+ T +HEEA E+D+ ++F EYGEI+N LNLDRRTG+VKGYALI
Sbjct: 29 THDGAVAVRSIEGWIIIATNIHEEASEEDVTDLFAEYGEIKNFSLNLDRRTGYVKGYALI 88
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
EY EA AI +NG +LL QT+ VD+AF P
Sbjct: 89 EYSTLPEAAEAIKELNGTKLLDQTIEVDYAFVRPP 123
>gi|380473305|emb|CCF46352.1| RNA recognition domain-containing protein, partial [Colletotrichum
higginsianum]
Length = 124
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 73/98 (74%)
Query: 70 RNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGF 129
RN + T G RSIEGWII+VT VHEEA E+ + ++FGE+GEI+NLHLNLDRR+G+
Sbjct: 27 RNESEMQTHGRATAVRSIEGWIIMVTNVHEEADEEAIHDMFGEFGEIKNLHLNLDRRSGY 86
Query: 130 VKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
VKGYALIEY EA+ AI + + +LL QT+ VD+AF
Sbjct: 87 VKGYALIEYATLAEARAAIDSAHETKLLDQTVYVDFAF 124
>gi|346319835|gb|EGX89436.1| RNA-binding protein 8A [Cordyceps militaris CM01]
Length = 175
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 71/93 (76%)
Query: 75 LGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYA 134
+ T G RSIEGWII+VT VHEEA E+ +Q+ FGE+GE++NLHLNLDRR+G+VKGYA
Sbjct: 40 MQTHGKATAVRSIEGWIIIVTNVHEEADEETIQDTFGEFGEVKNLHLNLDRRSGYVKGYA 99
Query: 135 LIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
LIEY EEA+ A+ + ++L QT+ VD+AF
Sbjct: 100 LIEYATLEEARAAVDGAHDTKMLDQTIHVDFAF 132
>gi|322694468|gb|EFY86297.1| RNA-binding protein 8A [Metarhizium acridum CQMa 102]
Length = 151
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 72/98 (73%)
Query: 70 RNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGF 129
RN + T RSIEGWII+VT VHEEA E+ +Q+ FG++GEI+NLHLNLDRR+G+
Sbjct: 17 RNESEMQTHTKATAVRSIEGWIIIVTNVHEEADEEAIQDKFGDFGEIKNLHLNLDRRSGY 76
Query: 130 VKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
VKGYALIEY EEA+ AI + +LL QT+ VD+AF
Sbjct: 77 VKGYALIEYATLEEARAAIDGAHETKLLDQTIAVDFAF 114
>gi|154300489|ref|XP_001550660.1| hypothetical protein BC1G_11068 [Botryotinia fuckeliana B05.10]
Length = 152
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 70/94 (74%)
Query: 74 SLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGY 133
S+ T RSIEGWII+VT VHEEA E+DL + F ++GEI+NLHLNLDRRTG+VKGY
Sbjct: 25 SMTTHSNATAVRSIEGWIIIVTNVHEEASEEDLNDKFADFGEIKNLHLNLDRRTGYVKGY 84
Query: 134 ALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
ALIEY +EA+ AI + +LL QT+ VD+AF
Sbjct: 85 ALIEYPTLDEARAAIDGAHNTKLLEQTVEVDFAF 118
>gi|171694916|ref|XP_001912382.1| hypothetical protein [Podospora anserina S mat+]
gi|170947700|emb|CAP59862.1| unnamed protein product [Podospora anserina S mat+]
Length = 197
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 67/87 (77%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWII+VT VHEEA E+ + ++FGEYGEIRNLHLNLDRRTG+VKGYALIEY EEA
Sbjct: 50 RSIEGWIIMVTNVHEEADEEAIHDMFGEYGEIRNLHLNLDRRTGYVKGYALIEYSTIEEA 109
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGP 171
+ AI + LL Q + VD+AF P
Sbjct: 110 RAAIDGAHNTPLLDQNVQVDFAFVRPP 136
>gi|164656611|ref|XP_001729433.1| hypothetical protein MGL_3468 [Malassezia globosa CBS 7966]
gi|159103324|gb|EDP42219.1| hypothetical protein MGL_3468 [Malassezia globosa CBS 7966]
Length = 188
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 77/111 (69%), Gaps = 1/111 (0%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RS+EGW+++VT +HEEA E+D+ ++F EYG++++LHLNLDRRTGFVKGYALI+Y+ +EA
Sbjct: 77 RSMEGWVLVVTNIHEEALEEDVMDLFMEYGKVQDLHLNLDRRTGFVKGYALIQYKTQQEA 136
Query: 145 QNAITAMNGG-ELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRR 194
+NAI A G LL Q L D+AF P P R R RS SP R
Sbjct: 137 ENAIDACKRGLTLLEQPLDADYAFVQPPKQPPHARGGSRRPARERSLSPMR 187
>gi|116182620|ref|XP_001221159.1| hypothetical protein CHGG_01938 [Chaetomium globosum CBS 148.51]
gi|88186235|gb|EAQ93703.1| hypothetical protein CHGG_01938 [Chaetomium globosum CBS 148.51]
Length = 219
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/87 (64%), Positives = 67/87 (77%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWI++VT VHEEA E+ + + FGE+GEIRN+HLNLDRRTG+VKGYALIEY EEA
Sbjct: 43 RSIEGWIVMVTNVHEEADEEAIHDKFGEFGEIRNVHLNLDRRTGYVKGYALIEYTTLEEA 102
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGP 171
+ AI N ELL Q + VD+AF P
Sbjct: 103 RAAIDGANDTELLDQNVQVDFAFVRPP 129
>gi|156102392|ref|XP_001616889.1| RNA binding protein [Plasmodium vivax Sal-1]
gi|148805763|gb|EDL47162.1| RNA binding protein, putative [Plasmodium vivax]
Length = 119
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 70/85 (82%)
Query: 83 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFE 142
P +SIEGWII++T +H EA++D +++VF +YG+I+NLHLNLDRRTGF+KGYA +E+ENF
Sbjct: 28 PAKSIEGWIIIITNIHGEARDDYIKDVFEKYGQIKNLHLNLDRRTGFLKGYAFLEFENFV 87
Query: 143 EAQNAITAMNGGELLTQTLTVDWAF 167
+A+ AI M+G LL Q + VDWAF
Sbjct: 88 DAKRAIDEMDGATLLDQEIHVDWAF 112
>gi|322704808|gb|EFY96399.1| RNA-binding protein 8A [Metarhizium anisopliae ARSEF 23]
Length = 151
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 73/98 (74%)
Query: 70 RNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGF 129
RN + T RSIEGWI++VT VHEEA E+ +Q+ FG++GEI+NLHLNLDRR+G+
Sbjct: 17 RNESEMQTHTKATAVRSIEGWIVIVTNVHEEADEEAIQDKFGDFGEIKNLHLNLDRRSGY 76
Query: 130 VKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
VKGYALIEY EEA+ AI + +LL QT++VD+AF
Sbjct: 77 VKGYALIEYATLEEARAAIDGAHETKLLDQTVSVDFAF 114
>gi|340515311|gb|EGR45566.1| predicted protein [Trichoderma reesei QM6a]
Length = 88
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 69/87 (79%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWII+VT VHEEA E+ LQ+ FG+YGEI+NLHLNLDRR+G+VKGYALIEY EEA
Sbjct: 1 RSIEGWIIIVTNVHEEADEEALQDKFGDYGEIKNLHLNLDRRSGYVKGYALIEYATLEEA 60
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGP 171
+ AI + +LL QT+ VD+AF P
Sbjct: 61 RAAIDGAHNTKLLDQTIQVDFAFVRPP 87
>gi|350296436|gb|EGZ77413.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 174
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 69/87 (79%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWI++VT VHEEA E+ +Q+ FGE+GEI+NLHLNLDRR+G+VKGYALIEY EEA
Sbjct: 45 RSIEGWIVMVTNVHEEADEEAIQDKFGEFGEIKNLHLNLDRRSGYVKGYALIEYPTLEEA 104
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGP 171
+ AI + +LL QT+ VD+AF P
Sbjct: 105 RAAIDGAHETKLLDQTIQVDFAFVRPP 131
>gi|336464345|gb|EGO52585.1| hypothetical protein NEUTE1DRAFT_150101 [Neurospora tetrasperma
FGSC 2508]
Length = 174
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 69/87 (79%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWI++VT VHEEA E+ +Q+ FGE+GEI+NLHLNLDRR+G+VKGYALIEY EEA
Sbjct: 45 RSIEGWIVMVTNVHEEADEEAIQDKFGEFGEIKNLHLNLDRRSGYVKGYALIEYPTLEEA 104
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGP 171
+ AI + +LL QT+ VD+AF P
Sbjct: 105 RAAIDGAHETKLLDQTIQVDFAFVRPP 131
>gi|429859998|gb|ELA34753.1| RNA-binding protein 8a [Colletotrichum gloeosporioides Nara gc5]
Length = 167
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 72/100 (72%)
Query: 75 LGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYA 134
+ T G RSIEGWI++VT VHEEA E+ +Q+ FGEYGEI+NLHLNLDRR+G+VKGYA
Sbjct: 1 MQTHGRATAVRSIEGWIVMVTNVHEEADEETIQDKFGEYGEIKNLHLNLDRRSGYVKGYA 60
Query: 135 LIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTG 174
LIEY EA+ AI + +LL QT+ VD+AF P G
Sbjct: 61 LIEYATLAEARAAINDAHETKLLDQTVYVDFAFVRPPPGG 100
>gi|169779063|ref|XP_001823996.1| RNA-binding protein 8A [Aspergillus oryzae RIB40]
gi|83772735|dbj|BAE62863.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 160
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 70/97 (72%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G RSIEGWI++ T +HEE+ E+D+ ++F EYGEI+N +LNLDRRTG+VKGYALI
Sbjct: 30 TQAGAVAVRSIEGWIVIATNIHEESSEEDVTDLFAEYGEIKNFNLNLDRRTGYVKGYALI 89
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPST 173
EY EA AI +NG +LL QT+ VD+AF P +
Sbjct: 90 EYSTLPEATEAIKNLNGTKLLDQTIQVDYAFVRPPPS 126
>gi|308805228|ref|XP_003079926.1| RNA-binding protein RBM8/Tsunagi (RRM superfamily) (ISS)
[Ostreococcus tauri]
gi|116058383|emb|CAL53572.1| RNA-binding protein RBM8/Tsunagi (RRM superfamily) (ISS)
[Ostreococcus tauri]
Length = 111
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 66/88 (75%)
Query: 83 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFE 142
P RS +GW+ILVTGVHEEAQEDD+ F ++GEI++LHLNLDRRTGFVKGYALIEY + +
Sbjct: 17 PVRSAQGWVILVTGVHEEAQEDDVYEAFADFGEIKSLHLNLDRRTGFVKGYALIEYGSKD 76
Query: 143 EAQNAITAMNGGELLTQTLTVDWAFSNG 170
EAQ AI M G +L + WAF G
Sbjct: 77 EAQAAIDGMRGESVLDVPVEASWAFVRG 104
>gi|296810846|ref|XP_002845761.1| RNA-binding protein 8A [Arthroderma otae CBS 113480]
gi|238843149|gb|EEQ32811.1| RNA-binding protein 8A [Arthroderma otae CBS 113480]
Length = 162
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 68/83 (81%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWII+ T +HEEA E+D+ ++F EYG+I+N +LNLDRRTG+VKGYALIEY EA
Sbjct: 35 RSIEGWIIIATNIHEEASEEDVTDLFAEYGDIKNFNLNLDRRTGYVKGYALIEYPTLPEA 94
Query: 145 QNAITAMNGGELLTQTLTVDWAF 167
+ AI A++G +LL QT+ VD+AF
Sbjct: 95 EAAIKALHGAKLLDQTIEVDFAF 117
>gi|330840692|ref|XP_003292345.1| hypothetical protein DICPUDRAFT_40410 [Dictyostelium purpureum]
gi|325077413|gb|EGC31127.1| hypothetical protein DICPUDRAFT_40410 [Dictyostelium purpureum]
Length = 174
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 88/146 (60%), Gaps = 19/146 (13%)
Query: 44 GGAPKKTKGRG-----FREEADSERHS---------RLADRNFESLGTDGGPGPQRSIEG 89
G P K KGRG E +SER+S + + N E G P +SIEG
Sbjct: 15 GILPSKIKGRGGNNVDSMEVDNSERYSGKGGEFHSLKNNEENSEEYGQ-----PLKSIEG 69
Query: 90 WIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAIT 149
+I+ ++ + EE QE D+ ++F EYG+I+N+HLN+DRRTGF+KGYALIEYEN EA++AI
Sbjct: 70 YIVFISNIQEEVQEPDIMDLFSEYGQIKNIHLNIDRRTGFIKGYALIEYENKSEAEDAIK 129
Query: 150 AMNGGELLTQTLTVDWAFSNGPSTGP 175
NG EL L V WAF G ++ P
Sbjct: 130 NGNGLELAGNALHVGWAFITGNTSLP 155
>gi|336267370|ref|XP_003348451.1| hypothetical protein SMAC_02945 [Sordaria macrospora k-hell]
gi|380092106|emb|CCC10374.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 177
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 68/83 (81%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWI++VT VHEEA E+ +Q+ FGE+GEI+NLHLNLDRR+G+VKGYALIEY EEA
Sbjct: 47 RSIEGWIVMVTNVHEEADEEAIQDKFGEFGEIKNLHLNLDRRSGYVKGYALIEYPTLEEA 106
Query: 145 QNAITAMNGGELLTQTLTVDWAF 167
+ AI + +LL QT+ VD+AF
Sbjct: 107 RAAIDGAHETKLLDQTIQVDFAF 129
>gi|85117784|ref|XP_965326.1| hypothetical protein NCU03226 [Neurospora crassa OR74A]
gi|28927133|gb|EAA36090.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 173
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 68/83 (81%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWI++VT VHEEA E+ +Q+ FGE+GEI+NLHLNLDRR+G+VKGYALIEY EEA
Sbjct: 45 RSIEGWIVMVTNVHEEADEEAIQDKFGEFGEIKNLHLNLDRRSGYVKGYALIEYPTLEEA 104
Query: 145 QNAITAMNGGELLTQTLTVDWAF 167
+ AI + +LL QT+ VD+AF
Sbjct: 105 RAAIDGAHETKLLDQTIQVDFAF 127
>gi|328768696|gb|EGF78742.1| hypothetical protein BATDEDRAFT_13131, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 104
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 67/87 (77%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
++EGWIILVT VHEEA E+D+ F +YG I+N+HLNLDRRTGFVKGYALIEY+ F+EA+
Sbjct: 1 AVEGWIILVTNVHEEATEEDVSEKFADYGVIKNMHLNLDRRTGFVKGYALIEYQKFQEAK 60
Query: 146 NAITAMNGGELLTQTLTVDWAFSNGPS 172
A+ +G +LL Q + D+AF G S
Sbjct: 61 AAVEQADGSDLLGQIIHADFAFVRGAS 87
>gi|331216227|ref|XP_003320793.1| hypothetical protein PGTG_02815 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309299783|gb|EFP76374.1| hypothetical protein PGTG_02815 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 193
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 97/170 (57%), Gaps = 16/170 (9%)
Query: 39 KSAITGGAPKKTKGRGFRE-------EADSER----HSRLADRNFESLGTDGGPGPQRSI 87
+S I K KGRGF+ E D+ + RL D + + G RS+
Sbjct: 20 ESPINQEVAVKRKGRGFKAGDATEPMEVDASAGQVIYERLDDEHQKEKEQTAG-NAARSV 78
Query: 88 EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
EGW+++V GVHEEA E+DL F +YG + NL + LDRRTG+VKGYAL+EYE +EA+ A
Sbjct: 79 EGWVVIVQGVHEEATEEDLMEKFSDYGHVMNLAMPLDRRTGYVKGYALVEYETRKEAEMA 138
Query: 148 ITAMNGGELLTQTLTVDWAFSNGPS--TGPFKRKNMRPGRTHRSRSPRRR 195
I + +LL QTL D+AF P+ + P + +R R RSRSP ++
Sbjct: 139 IKSGTDSKLLDQTLKCDFAFVRAPTGASAPIGQPKVR--RGGRSRSPPKK 186
>gi|403357290|gb|EJY78271.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 109
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Query: 68 ADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT 127
+DR + L D GP +S+EG+ + V+G+H E QE+DLQ++FG YG++RNLHLNLDRRT
Sbjct: 4 SDR-YTGLDQDSDIGPMKSVEGYTLCVSGLHGEVQEEDLQDLFGAYGQVRNLHLNLDRRT 62
Query: 128 GFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPS 172
G+VKGYA +E+E + A+ I +NG LL Q + VD+AF P
Sbjct: 63 GYVKGYAFLEFEELKTAKKVIDELNGKMLLGQQIKVDFAFKRPPQ 107
>gi|124808101|ref|XP_001348230.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23497120|gb|AAN36669.1|AE014816_54 RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 107
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 69/90 (76%)
Query: 83 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFE 142
P +S+EGWII++T +H EA++D ++ VF +G+I+NLHLN+DRRTGF+KGYA +EYENF
Sbjct: 16 PAKSVEGWIIIITNIHGEARDDYIKEVFERFGQIKNLHLNIDRRTGFLKGYAFLEYENFV 75
Query: 143 EAQNAITAMNGGELLTQTLTVDWAFSNGPS 172
+A+ AI M+G LL Q + VDWAF S
Sbjct: 76 DAKRAIDEMDGTMLLNQEIHVDWAFVQEKS 105
>gi|389636995|ref|XP_003716139.1| RNA-binding protein 8A [Magnaporthe oryzae 70-15]
gi|351641958|gb|EHA49820.1| RNA-binding protein 8A [Magnaporthe oryzae 70-15]
gi|440469271|gb|ELQ38388.1| RNA-binding protein 8A [Magnaporthe oryzae Y34]
gi|440486698|gb|ELQ66537.1| RNA-binding protein 8A [Magnaporthe oryzae P131]
Length = 160
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWII+VT VHEEA E+ + + FG++GEI+NLHLNLDRR+G+VKGYALIEY EA
Sbjct: 40 RSIEGWIIMVTNVHEEADEEAIHDKFGDFGEIKNLHLNLDRRSGYVKGYALIEYPTLAEA 99
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGP 171
+ AI + +LL QT+ VD+AF P
Sbjct: 100 RAAIDGAHESKLLDQTVYVDFAFVRPP 126
>gi|325092668|gb|EGC45978.1| RNA-binding protein [Ajellomyces capsulatus H88]
Length = 161
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G RSIEGWI+L T +HEEA E+D+ ++F EYGEI+N +LNLDRRTG+ GYALI
Sbjct: 31 TQAGAVAVRSIEGWIVLATNIHEEASEEDVTDLFAEYGEIKNFNLNLDRRTGY--GYALI 88
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
EY EA+ AI A+NG +LL QT+ VD+AF P
Sbjct: 89 EYTTLPEAKAAIEALNGAKLLDQTIQVDFAFVRPP 123
>gi|19115351|ref|NP_594439.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|74675984|sp|O42847.1|YFH9_SCHPO RecName: Full=Uncharacterized RNA-binding protein C23A1.09
gi|2879797|emb|CAA16983.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe]
Length = 121
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 75/109 (68%), Gaps = 7/109 (6%)
Query: 83 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFE 142
P +S+EG+II+VTGVH EA E+ ++++F ++G ++NLHLNLDRRTG+VKGYALIEY E
Sbjct: 3 PAKSVEGYIIIVTGVHPEATEEQVEDLFADFGPVKNLHLNLDRRTGYVKGYALIEYATLE 62
Query: 143 EAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRS 191
+AQ A+ N LL + L VD+AF P P RP + RSRS
Sbjct: 63 QAQKAVDEKNLS-LLDEKLEVDFAFLEPPERAP------RPSISTRSRS 104
>gi|226292932|gb|EEH48352.1| RNA-binding protein 8A [Paracoccidioides brasiliensis Pb18]
Length = 160
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 77/115 (66%), Gaps = 15/115 (13%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G RSIEGWI+L T +HEEA E+D+ ++F EYGEI+N +LNLDRRTG+ GYALI
Sbjct: 31 TQAGAVAVRSIEGWIVLATNIHEEASEEDVTDLFAEYGEIKNFNLNLDRRTGY--GYALI 88
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRS 191
EY EA+ AI A+NG +LL Q++ VD+AF +RP +++SRS
Sbjct: 89 EYTTLPEAKAAIEALNGAKLLDQSIQVDFAF-------------VRPPPSNKSRS 130
>gi|295661322|ref|XP_002791216.1| RNA-binding protein 8A [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280778|gb|EEH36344.1| RNA-binding protein 8A [Paracoccidioides sp. 'lutzii' Pb01]
Length = 160
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G RSIEGWI+L T +HEEA E+D+ ++F EYGEI+N +LNLDRRTG+ GYALI
Sbjct: 31 TQAGAVAVRSIEGWIVLATNIHEEASEEDVTDLFAEYGEIKNFNLNLDRRTGY--GYALI 88
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
EY EA+ AI A+NG +LL Q++ VD+AF P
Sbjct: 89 EYTTLPEAKAAIEALNGAKLLDQSIQVDFAFVRPP 123
>gi|399218393|emb|CCF75280.1| unnamed protein product [Babesia microti strain RI]
Length = 115
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 79/111 (71%), Gaps = 1/111 (0%)
Query: 58 EADSERHSRLADRNFE-SLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEI 116
+ D++ + +L + + SL D P +S+EGWII+V GVHEEAQE+D+++ F +G +
Sbjct: 2 KTDNDVYDQLEEITIDKSLLPDPNIIPVKSVEGWIIVVRGVHEEAQEEDVRDAFENFGTV 61
Query: 117 RNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
RNLHLNLDRRTG+VKGYALIE+ + E+A AI MNG ELL + + V W F
Sbjct: 62 RNLHLNLDRRTGYVKGYALIEFGSQEQAIEAIKGMNGKELLGKNVEVGWVF 112
>gi|443900290|dbj|GAC77616.1| glyoxalase [Pseudozyma antarctica T-34]
Length = 629
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 88/150 (58%), Gaps = 6/150 (4%)
Query: 49 KTKGRGFREEADSERHSRLADRNFESL----GTDGGPGPQRSIEGWIILVTGVHEEAQED 104
K +GRGF + + FESL D +S+EGW+++VT VHEEA E+
Sbjct: 29 KRRGRGFDPRGNGPASDGVKTGKFESLTEAEADDSSARAAKSVEGWVVVVTNVHEEATEE 88
Query: 105 DLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGG-ELLTQTLTV 163
++ + F +YG++++ HLNLDRRTG+VKGYAL+E+ +EAQ AI A G L+ + L
Sbjct: 89 EVIDKFADYGDVKSCHLNLDRRTGYVKGYALLEFAEQDEAQAAIQACTDGLTLMDEELKA 148
Query: 164 DWAFSNGPSTGPFKRKN-MRPGRTHRSRSP 192
D+AF P P R N R G RSRSP
Sbjct: 149 DFAFVRPPHNAPAPRGNGSRRGNRDRSRSP 178
>gi|225562730|gb|EEH11009.1| RNA-binding protein 8A [Ajellomyces capsulatus G186AR]
Length = 161
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G RSIEGWI+L T +HEEA E+D+ ++F EYGEI+N +LNLDRRTG+ GYALI
Sbjct: 31 TQAGAVAVRSIEGWIVLATNIHEEASEEDVTDLFAEYGEIKNFNLNLDRRTGY--GYALI 88
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
E+ EA+ AI A+NG +LL QT+ VD+AF P
Sbjct: 89 EFTTLPEAKAAIEALNGAKLLDQTIQVDFAFVRPP 123
>gi|384253185|gb|EIE26660.1| hypothetical protein COCSUDRAFT_12101, partial [Coccomyxa
subellipsoidea C-169]
Length = 93
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 65/82 (79%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
++EGW+I + GVHEEA E+DL + F E+GE++N++LNLDRRTG+VKGYA++EY +EAQ
Sbjct: 1 AVEGWVIFIGGVHEEASEEDLHDTFAEFGEVKNIYLNLDRRTGYVKGYAMVEYVTKKEAQ 60
Query: 146 NAITAMNGGELLTQTLTVDWAF 167
+AI MNG E +TQ L V W F
Sbjct: 61 DAIDNMNGQEFMTQPLLVTWCF 82
>gi|320164985|gb|EFW41884.1| RNA binding domain-containing protein [Capsaspora owczarzaki ATCC
30864]
Length = 135
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 82 GPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENF 141
GPQRS EGW+++VTG+HEEA +D + + F E G +R + L DRRTGF KGYALIEY
Sbjct: 31 GPQRSTEGWVVMVTGLHEEAAKDAINDKFSEAGHVRKVVLEYDRRTGFNKGYALIEYNEM 90
Query: 142 EEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHR 188
EAQ AI +NG L QT+ VDWAF P+ R + R GR R
Sbjct: 91 SEAQTAIEELNGTSYLDQTIGVDWAFVRPPAGA---RSSRRGGRGDR 134
>gi|320586846|gb|EFW99509.1| RNA-binding protein [Grosmannia clavigera kw1407]
Length = 196
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 66/89 (74%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWI++VT VHEEA E+ L + F ++GEI+N+HLNLDRR+G+VKGY LIEY EA
Sbjct: 64 RSIEGWIVIVTNVHEEADEEALHDKFSDFGEIKNMHLNLDRRSGYVKGYCLIEYPTLNEA 123
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGPST 173
+ AI + +LL QT+ VD+AF P T
Sbjct: 124 RAAIDGAHQTKLLDQTVQVDFAFVRPPPT 152
>gi|392579767|gb|EIW72894.1| hypothetical protein TREMEDRAFT_25312, partial [Tremella
mesenterica DSM 1558]
Length = 108
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 76/107 (71%), Gaps = 2/107 (1%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
++EGWII+VTG++EE E+DLQ++FGE+GEI+NL + L+RRTG+V GYALIEY +EA
Sbjct: 1 AVEGWIIIVTGLNEETTEEDLQDLFGEFGEIKNLSMALNRRTGYVMGYALIEYALRDEAA 60
Query: 146 NAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSP 192
AI NG L +T+T D+AF+ GP+ +R R RS+SP
Sbjct: 61 AAIKGTNGTTFLEKTITSDYAFAKGPAGA--RRSAPRARGRDRSQSP 105
>gi|237837769|ref|XP_002368182.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|211965846|gb|EEB01042.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|221509052|gb|EEE34621.1| RNA binding motif-containing protein, putative [Toxoplasma gondii
VEG]
Length = 162
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 100/165 (60%), Gaps = 24/165 (14%)
Query: 23 ADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFRE---EADSERHS-------RLADRNF 72
ADVD + R+P + +K KGRG +E E D R+S RL ++N
Sbjct: 2 ADVDMTVDRRSP--------SASKSRKQKGRGLKEGGRETDG-RYSGQAGVFERLEEQNG 52
Query: 73 ESLG-----TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT 127
+ G P RS+EGWII+V +HEEAQE+D+ F +G+I+NLHLNLDRRT
Sbjct: 53 ATSTRRESEKSKGAAPARSVEGWIIVVRNLHEEAQEEDIHENFESFGQIKNLHLNLDRRT 112
Query: 128 GFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPS 172
GFVKGYA IE+E FEEA+ AI M+ +LL QT+ VDWAFS P+
Sbjct: 113 GFVKGYAFIEFETFEEAEAAIRGMDNQQLLGQTVYVDWAFSKAPN 157
>gi|71020961|ref|XP_760711.1| hypothetical protein UM04564.1 [Ustilago maydis 521]
gi|46100305|gb|EAK85538.1| hypothetical protein UM04564.1 [Ustilago maydis 521]
Length = 626
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 89/151 (58%), Gaps = 8/151 (5%)
Query: 49 KTKGRGFREEADSERHSRLADRNFESL--GTDGGPGPQRSIEGWIILVTGVHEEAQEDDL 106
K +GRGF + + F++L D G +S+EGW+I+VT VHEEA E+D+
Sbjct: 29 KRRGRGFDPRGNGPASEGVKAGRFDTLDETADSGARAVKSVEGWVIVVTNVHEEATEEDV 88
Query: 107 QNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGG-ELLTQTLTVDW 165
+ F +YG +R+ HLNLDRRTG+VKGYAL+E+ +EAQ AI A G LL Q L D+
Sbjct: 89 TDKFLDYGMVRSCHLNLDRRTGYVKGYALLEFAEQDEAQAAIQACQEGLTLLDQELKADF 148
Query: 166 AFSNGPSTGPFKRKNMRPGRTH----RSRSP 192
AF P+ G + + R + RSRSP
Sbjct: 149 AFVKPPA-GAVSIRGVASRRVNANRDRSRSP 178
>gi|384483759|gb|EIE75939.1| hypothetical protein RO3G_00643 [Rhizopus delemar RA 99-880]
Length = 128
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 67/90 (74%)
Query: 83 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFE 142
P RS+EGWI+++ G+HEE ED L F E+G+++ +HLNLDR+TG+VKGYA IEYE+ +
Sbjct: 19 PVRSVEGWILIIQGLHEETDEDSLYERFREFGDVKTVHLNLDRQTGYVKGYAFIEYESRK 78
Query: 143 EAQNAITAMNGGELLTQTLTVDWAFSNGPS 172
EA+ A+ NG L +T+ VD+AF GP+
Sbjct: 79 EAEAAVEQANGTRYLGETIKVDYAFVKGPA 108
>gi|221488550|gb|EEE26764.1| RNA binding motif-containing protein, putative [Toxoplasma gondii
GT1]
Length = 162
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 100/165 (60%), Gaps = 24/165 (14%)
Query: 23 ADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFRE---EADSERHS-------RLADRNF 72
ADVD + R+P + +K KGRG +E E D R+S RL ++N
Sbjct: 2 ADVDMTLDRRSP--------SASKSRKQKGRGLKEGGRETDG-RYSGQAGVFERLEEQNG 52
Query: 73 ESLG-----TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT 127
+ G P RS+EGWII+V +HEEAQE+D+ F +G+I+NLHLNLDRRT
Sbjct: 53 ATSTRRESEKSKGAAPARSVEGWIIVVRNLHEEAQEEDIHENFESFGQIKNLHLNLDRRT 112
Query: 128 GFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPS 172
GFVKGYA IE+E FEEA+ AI M+ +LL QT+ VDWAFS P+
Sbjct: 113 GFVKGYAFIEFETFEEAEAAIRGMDNQQLLGQTVYVDWAFSKAPN 157
>gi|400595471|gb|EJP63272.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 168
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 77/120 (64%), Gaps = 12/120 (10%)
Query: 58 EADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIR 117
E D+ + L D + + T G RSIEGWII+VT VHEEA E+ +Q+ FGE+GE++
Sbjct: 7 EVDTVASAPLQDESL--MQTHGKATAVRSIEGWIIIVTNVHEEADEETIQDTFGEFGEVK 64
Query: 118 NLHLNLDRRTGFV----------KGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
NLHLNLDRR+ V +GYALIE+ EEA+ AI NG ++L QT+ VD+AF
Sbjct: 65 NLHLNLDRRSEPVSPTAQHANQWQGYALIEFATLEEARAAIDGANGTKMLDQTIQVDFAF 124
>gi|402079216|gb|EJT74481.1| RNA-binding protein 8A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 184
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 62/77 (80%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
RSIEGWI++ T VHEEA E+ +Q+ FG+YGEI+NLHLNLDRR+G+VKGYALIEY +EA
Sbjct: 54 RSIEGWIVMATNVHEEADEEAIQDKFGDYGEIKNLHLNLDRRSGYVKGYALIEYATLQEA 113
Query: 145 QNAITAMNGGELLTQTL 161
+ AI + +LL QT+
Sbjct: 114 RAAIDGAHETKLLDQTV 130
>gi|156087831|ref|XP_001611322.1| RNA recognition motif domain containing protein [Babesia bovis]
gi|154798576|gb|EDO07754.1| RNA recognition motif domain containing protein [Babesia bovis]
Length = 98
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 68/87 (78%)
Query: 83 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFE 142
P ++I GW+I+VTGVH EAQE+D+++ F +G+I ++HLN+DRR+G+ KGYA IE+ +
Sbjct: 7 PIKTIGGWVIIVTGVHPEAQEEDIRDAFEGFGQITSIHLNMDRRSGYAKGYAFIEFSEQQ 66
Query: 143 EAQNAITAMNGGELLTQTLTVDWAFSN 169
EA++AIT MNG ++L Q + V WAF +
Sbjct: 67 EARSAITEMNGHQILGQEVAVAWAFKD 93
>gi|340507354|gb|EGR33330.1| ser thr protein phosphatase family protein, putative
[Ichthyophthirius multifiliis]
Length = 362
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 64/87 (73%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
++++GW++ V+G+ +E ED + + F E GEI+N HLNLDRRTG+ KGYAL++YEN ++A
Sbjct: 272 KAVDGWLVFVSGLDQETTEDHIYDSFCEVGEIKNCHLNLDRRTGYAKGYALVQYENIKDA 331
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGP 171
Q AI +NG +L Q + VDWAF P
Sbjct: 332 QAAIEQLNGTTILNQKIQVDWAFKRPP 358
>gi|343425450|emb|CBQ68985.1| related to RNA-binding protein 8A [Sporisorium reilianum SRZ2]
Length = 159
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 79/126 (62%), Gaps = 3/126 (2%)
Query: 49 KTKGRGFREEADSERHSRLADRNFESL--GTDGGPGPQRSIEGWIILVTGVHEEAQEDDL 106
K +GRGF + + F+ L +D G +S+EGW+I+VT VHEEA E+++
Sbjct: 8 KRRGRGFDPRGNGPASEGVKAGRFDVLDEASDSGARAVKSVEGWVIVVTNVHEEATEEEV 67
Query: 107 QNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGG-ELLTQTLTVDW 165
+ F +YG +++ HLNLDRRTG+VKGYAL+E+ +EAQ AI A + G LL + L D+
Sbjct: 68 MDKFLDYGNVKSCHLNLDRRTGYVKGYALLEFAEQDEAQAAIQACSDGLTLLDEELKADF 127
Query: 166 AFSNGP 171
AF P
Sbjct: 128 AFVKPP 133
>gi|406607334|emb|CCH41287.1| hypothetical protein BN7_824 [Wickerhamomyces ciferrii]
Length = 138
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 76/119 (63%), Gaps = 3/119 (2%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G +SIEG++I+V VHEEA E+D+Q F E+G ++N+HLNLDR+TG+VKGYALI
Sbjct: 21 TKQGIPIAKSIEGYVIIVQNVHEEATEEDVQEFFEEFGPVKNIHLNLDRQTGYVKGYALI 80
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKR-KNMRPGRTHRSRSPRR 194
EY + A A+ +G ELL L++D+AF + S KR K + R +SP R
Sbjct: 81 EYTELQNAIRAVQEGDGEELLGHILSIDYAFVH--SDLELKRGKRDKDEEKVRDKSPER 137
>gi|213404636|ref|XP_002173090.1| RNA-binding protein 8A [Schizosaccharomyces japonicus yFS275]
gi|212001137|gb|EEB06797.1| RNA-binding protein 8A [Schizosaccharomyces japonicus yFS275]
Length = 123
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 73/113 (64%), Gaps = 6/113 (5%)
Query: 83 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFE 142
P +SIEG+ ILVTG+H E E+ ++++F ++G +RNLHLNLDRRTG+VKGYAL+EY E
Sbjct: 9 PAKSIEGYTILVTGLHPETTEEQVEDLFLDFGPVRNLHLNLDRRTGYVKGYALLEYAELE 68
Query: 143 EAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
+AQ A+ A + LL L D+AF P + M RS+SP RR
Sbjct: 69 QAQKAVEA-SQLTLLGHKLQADYAFLEPPVS-----HRMDVDSRSRSQSPARR 115
>gi|328859076|gb|EGG08186.1| hypothetical protein MELLADRAFT_35044 [Melampsora larici-populina
98AG31]
Length = 84
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 63/82 (76%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
++EGW+I VTGVHEEA E+DLQ+ F +YG + NL + LDRRTG+VKGYAL+EYE +EA+
Sbjct: 1 AVEGWVITVTGVHEEATEEDLQDKFSDYGSVMNLAMPLDRRTGYVKGYALVEYETRKEAE 60
Query: 146 NAITAMNGGELLTQTLTVDWAF 167
AI +G +LL Q L D+AF
Sbjct: 61 TAIREGSGSKLLDQKLECDFAF 82
>gi|219119561|ref|XP_002180538.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408011|gb|EEC47946.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 138
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 65/86 (75%)
Query: 82 GPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENF 141
GPQ+S++GW+I VTG+HEE+QEDD+ ++F E+G++++ L+ +RRTG V GYA+IEY
Sbjct: 36 GPQKSVDGWVIFVTGLHEESQEDDIIDMFSEHGQVKDFKLSYNRRTGQVIGYAMIEYARQ 95
Query: 142 EEAQNAITAMNGGELLTQTLTVDWAF 167
EAQ+ I +G L +T++V WAF
Sbjct: 96 SEAQDTINNFHGKRFLGKTISVHWAF 121
>gi|82540036|ref|XP_724364.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478982|gb|EAA15929.1| RNA binding motif protein 8B-related [Plasmodium yoelii yoelii]
Length = 95
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 83 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFE 142
P +S+EGWII++T +H EA+ED ++ VF E+G+IRNLHLNLDRRTGF+KGYA +E+ENF
Sbjct: 16 PAKSVEGWIIIITNIHGEAREDYIKEVFEEFGQIRNLHLNLDRRTGFIKGYAFLEFENFV 75
Query: 143 EAQNAITAM-NGGELLTQT 160
+A+ AI M N +++ T
Sbjct: 76 DAKRAIDGMSNKCDIICST 94
>gi|389585900|dbj|GAB68630.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 111
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 69/102 (67%), Gaps = 18/102 (17%)
Query: 84 QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEE 143
+ +IEGWII++T +H EA++D +++VF +YG+I+NLHLNLDRRTGF+KGYA +E+ENF +
Sbjct: 3 EEAIEGWIIIITNIHGEARDDYIKDVFEKYGQIKNLHLNLDRRTGFLKGYAFLEFENFVD 62
Query: 144 AQNAITA------------------MNGGELLTQTLTVDWAF 167
A+ AI M+G LL Q + VDWAF
Sbjct: 63 AKRAIDGKNVLHKNACDVFQWLYRQMDGATLLNQEIHVDWAF 104
>gi|405119020|gb|AFR93793.1| RNA binding protein [Cryptococcus neoformans var. grubii H99]
Length = 123
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 72/111 (64%), Gaps = 5/111 (4%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
+S+EGW I VTG+HEEA EDD+Q+ F ++G I+ +++ L+RRTG+V GYA+IEY + E A
Sbjct: 18 KSVEGWNIFVTGLHEEATEDDVQDFFADFGSIKQVNMPLNRRTGYVMGYAIIEYNDRENA 77
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
+ AI +G L QT+ V +AF+ P G +R+ R SP RR
Sbjct: 78 ERAIAEADGTTFLEQTIHVTFAFAKAPQGGAQRREG-----KARELSPSRR 123
>gi|430812422|emb|CCJ30152.1| unnamed protein product [Pneumocystis jirovecii]
Length = 183
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 73 ESLGTDGGPGPQRSIEGWII-LVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVK 131
E+ T G + +IEGW + VHEE E+DLQ+ F EYGEI+NLHLNLDRRTG ++
Sbjct: 54 EAAWTQYGIRARLAIEGWSYSCLQDVHEETSEEDLQDKFSEYGEIKNLHLNLDRRTGRIR 113
Query: 132 -GYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKR 178
GYAL+EY + EA+ AI NG +LL TL+VD+AF P +R
Sbjct: 114 TGYALLEYTHLSEAKAAIAHCNGTQLLESTLSVDFAFVQPVENVPIQR 161
>gi|71026176|ref|XP_762774.1| hypothetical protein [Theileria parva strain Muguga]
gi|68349726|gb|EAN30491.1| hypothetical protein TP03_0650 [Theileria parva]
Length = 76
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 61/73 (83%)
Query: 78 DGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIE 137
+G P +SIEGW+++VTG+HEEAQ++D++ F YG + NLHLNLDRRTG+VKGYAL+E
Sbjct: 3 NGTGAPIKSIEGWVLMVTGIHEEAQDEDVREAFENYGTVTNLHLNLDRRTGYVKGYALLE 62
Query: 138 YENFEEAQNAITA 150
++N EEA+NA+ +
Sbjct: 63 FKNKEEAENAMAS 75
>gi|70927875|ref|XP_736232.1| RNA binding protein [Plasmodium chabaudi chabaudi]
gi|56510592|emb|CAH81069.1| RNA binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 84
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 58/69 (84%)
Query: 83 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFE 142
P +S+EGWII++T +H EA+ED ++ VF E+G+IRNLHLNLDRRTGF+KGYA +E+ENF
Sbjct: 16 PAKSVEGWIIIITNIHGEAREDYIKEVFEEFGQIRNLHLNLDRRTGFIKGYAFLEFENFV 75
Query: 143 EAQNAITAM 151
+A+ AI M
Sbjct: 76 DAKRAIDGM 84
>gi|58265306|ref|XP_569809.1| RNA binding protein [Cryptococcus neoformans var. neoformans JEC21]
gi|57226041|gb|AAW42502.1| RNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 123
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 72/111 (64%), Gaps = 5/111 (4%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
+S+EGW I VTG+HEEA E+D+Q+ F ++G I+ +++ L+RRTG+V GYA+IEY + E A
Sbjct: 18 KSVEGWNIFVTGLHEEATEEDVQDFFADFGSIKQVNMPLNRRTGYVMGYAIIEYNDRENA 77
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
+ AI +G L QT+ V +AF+ P G +R+ R SP RR
Sbjct: 78 ERAIAEADGTTFLEQTIHVTFAFAKAPQGGAQRREG-----KARELSPTRR 123
>gi|134109203|ref|XP_776716.1| hypothetical protein CNBC2070 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259396|gb|EAL22069.1| hypothetical protein CNBC2070 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 123
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 74/111 (66%), Gaps = 5/111 (4%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
+S+EGW I VTG+HEEA E+D+Q+ F ++G I+ +++ L+RRTG+V GYA+IEY + E A
Sbjct: 18 KSVEGWNIFVTGLHEEATEEDVQDFFADFGSIKQVNMPLNRRTGYVMGYAIIEYNDRENA 77
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
+ AI +G L QT+ V +AF+ P G +R+ G+ R SP RR
Sbjct: 78 ERAIAEADGTTFLEQTIHVTFAFAKAPQGGAQRRE----GKV-RELSPTRR 123
>gi|210075851|ref|XP_503462.2| YALI0E02530p [Yarrowia lipolytica]
gi|199426875|emb|CAG79041.2| YALI0E02530p [Yarrowia lipolytica CLIB122]
Length = 120
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 73/119 (61%), Gaps = 3/119 (2%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T+ P P RS EGWII+V +H E E+DL + + YG+++ H+NLDRRTG+ KGYAL+
Sbjct: 4 TENEPTPLRSTEGWIIIVDNLHPEISEEDLTDFYSTYGDVQVAHVNLDRRTGYAKGYALL 63
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
++ ++A AI NG E L L V +AF ++ + +R G +RSRSP RR
Sbjct: 64 QFATKDDADTAIAETNGVEFLEHNLEVSFAFHEADTS--ISQHRIR-GSENRSRSPGRR 119
>gi|321254341|ref|XP_003193042.1| RNA binding protein [Cryptococcus gattii WM276]
gi|317459511|gb|ADV21255.1| RNA binding protein, putative [Cryptococcus gattii WM276]
Length = 123
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 72/111 (64%), Gaps = 5/111 (4%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
+S+EGW I VTG+HEEA E+D+Q+ F ++G I+ +++ L+RRTG+V GYA+IEY + E A
Sbjct: 18 KSVEGWNIFVTGLHEEATEEDVQDFFADFGSIKQVNMPLNRRTGYVMGYAIIEYNDRENA 77
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRR 195
+ AI +G L QT+ V +AF+ P G +R+ R SP RR
Sbjct: 78 ERAIAEADGTTFLEQTIHVTFAFAKAPQGGAQRREG-----KGRELSPDRR 123
>gi|15010564|gb|AAK73941.1| At1g51510/F5D21_5 [Arabidopsis thaliana]
gi|20334850|gb|AAM16181.1| At1g51510/F5D21_5 [Arabidopsis thaliana]
Length = 110
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 67/89 (75%), Gaps = 5/89 (5%)
Query: 1 MANAEVDALDFE--DDDLMDEDGTADVDASSSPRAPQPKLKSAITGG---APKKTKGRGF 55
MAN E +A+DFE +DDLMDE+GTA A SPRA P+LKSAI G + KKTKGRGF
Sbjct: 1 MANIESEAVDFEPEEDDLMDEEGTAIDGADVSPRAGHPRLKSAIAGANGESAKKTKGRGF 60
Query: 56 REEADSERHSRLADRNFESLGTDGGPGPQ 84
REE DS+R RL+ R+FESLG+DG PGP+
Sbjct: 61 REEKDSDRQRRLSSRDFESLGSDGRPGPR 89
>gi|154279756|ref|XP_001540691.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412634|gb|EDN08021.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 155
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 62/95 (65%), Gaps = 11/95 (11%)
Query: 77 TDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALI 136
T G RSIEGWI+L T +HEEA E+D+ ++F EYGEI+N +LNLDRRTG+VK
Sbjct: 31 TQAGAVAVRSIEGWIVLATNIHEEASEEDVTDLFAEYGEIKNFNLNLDRRTGYVKA---- 86
Query: 137 EYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
+ AI A+NG +LL QT+ VD+AF P
Sbjct: 87 -------TKAAIEALNGAKLLDQTIQVDFAFVRPP 114
>gi|221060574|ref|XP_002260932.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193811006|emb|CAQ42904.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 123
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 58/66 (87%)
Query: 83 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFE 142
P +SIEGWII++T +H EA++D +++VF +YG+I+NLHLNLDRRTGF+KGYA +E+ENF
Sbjct: 16 PAKSIEGWIIIITNIHGEARDDYIRDVFEKYGQIKNLHLNLDRRTGFLKGYAFLEFENFV 75
Query: 143 EAQNAI 148
+A+ AI
Sbjct: 76 DAKRAI 81
>gi|238604073|ref|XP_002396111.1| hypothetical protein MPER_03721 [Moniliophthora perniciosa FA553]
gi|215468034|gb|EEB97041.1| hypothetical protein MPER_03721 [Moniliophthora perniciosa FA553]
Length = 117
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 55/75 (73%)
Query: 69 DRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTG 128
DR S D RS+EGWI+LVT VHEEA E+++ + F EYGEI+NLHLNLDRRTG
Sbjct: 42 DRVESSNAKDTDTRAARSVEGWIVLVTNVHEEATEEEVTDKFAEYGEIKNLHLNLDRRTG 101
Query: 129 FVKGYALIEYENFEE 143
+VKGYA++EYE E
Sbjct: 102 YVKGYAIVEYETMTE 116
>gi|403222825|dbj|BAM40956.1| mRNA transport factor [Theileria orientalis strain Shintoku]
Length = 1869
Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 41/66 (62%), Positives = 58/66 (87%)
Query: 83 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFE 142
P +SIEGW++LVTG+HEEAQE+D++++F YG + ++HLNLDRRTG+VKGYAL+E++
Sbjct: 7 PVKSIEGWVLLVTGIHEEAQEEDVRDLFENYGTVTSVHLNLDRRTGYVKGYALLEFKERN 66
Query: 143 EAQNAI 148
EA+NAI
Sbjct: 67 EAENAI 72
>gi|406701557|gb|EKD04674.1| hypothetical protein A1Q2_01012 [Trichosporon asahii var. asahii
CBS 8904]
Length = 133
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 76/114 (66%), Gaps = 4/114 (3%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
++EGWII+VT ++EE E+DL++ F ++G ++NL + L+RRTG+V GYALIEY EEA+
Sbjct: 20 AVEGWIIIVTNLNEETTEEDLEDHFADFGNVKNLSMALNRRTGYVMGYALIEYATKEEAE 79
Query: 146 NAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGR----THRSRSPRRR 195
AI A NG E L + + D+AF+ P+ R++ PGR RS SP RR
Sbjct: 80 AAIKATNGTEFLEKKINTDFAFAKPPAGAGGGRRDRAPGRRGGVRDRSVSPGRR 133
>gi|197127895|gb|ACH44393.1| putative RNA-binding protein 8A [Taeniopygia guttata]
Length = 139
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 59/82 (71%), Gaps = 4/82 (4%)
Query: 52 GRGFREEADSERHSRLADRNFESLGTDGG-PGPQRSIEGWIILVTGVHEEAQEDDLQNVF 110
GRGF E S R +++S+ DG PGPQRS+EGWI+ VTGVHEEA E+D+ + F
Sbjct: 37 GRGFGSEEGSRARVR---EDYDSVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDVHDRF 93
Query: 111 GEYGEIRNLHLNLDRRTGFVKG 132
E+GEI+N+HLNLDRRTG +G
Sbjct: 94 AEFGEIKNIHLNLDRRTGIPQG 115
>gi|68005382|ref|XP_670010.1| RNA binding protein [Plasmodium berghei strain ANKA]
gi|56484840|emb|CAI03194.1| RNA binding protein, putative [Plasmodium berghei]
Length = 72
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 50/57 (87%)
Query: 83 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYE 139
P +S+EGWII++T +H EA+ED ++ VF E+G+IRNLHLNLDRRTGF+KGYA +E++
Sbjct: 16 PAKSVEGWIIIITNIHGEAREDYIKEVFEEFGQIRNLHLNLDRRTGFIKGYAFLEFK 72
>gi|339246371|ref|XP_003374819.1| putative RNA-binding protein [Trichinella spiralis]
gi|316971946|gb|EFV55659.1| putative RNA-binding protein [Trichinella spiralis]
Length = 228
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 60/89 (67%)
Query: 83 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFE 142
P S++GW I+V+ +H+EA+ED+++ F ++G ++ +++ L+R TG++ G A+IEYE ++
Sbjct: 134 PVPSVDGWTIIVSNLHQEAEEDEIKQAFEDFGPVKTINILLNRETGYLTGVAIIEYEVYD 193
Query: 143 EAQNAITAMNGGELLTQTLTVDWAFSNGP 171
A A+ MNG L + L VDW F P
Sbjct: 194 MALEAVQTMNGATFLGKKLKVDWLFIEKP 222
>gi|346973911|gb|EGY17363.1| RNA-binding protein 8A [Verticillium dahliae VdLs.17]
Length = 150
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%)
Query: 70 RNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGF 129
RN + T G RSIEGWI++VT VHEEA E+ L ++FGEYGEI+NLHL LDRR+G+
Sbjct: 37 RNESQMQTHGRATAVRSIEGWIVIVTNVHEEADEEALHDMFGEYGEIKNLHLPLDRRSGY 96
Query: 130 VKG 132
VKG
Sbjct: 97 VKG 99
>gi|302416069|ref|XP_003005866.1| RNA-binding protein 8A [Verticillium albo-atrum VaMs.102]
gi|261355282|gb|EEY17710.1| RNA-binding protein 8A [Verticillium albo-atrum VaMs.102]
Length = 197
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%)
Query: 106 LQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDW 165
L ++FGEYGEI+NLHL LDRR+G+VKGYALIEY EA+ AI + +LL Q+++VD+
Sbjct: 78 LHDMFGEYGEIKNLHLPLDRRSGYVKGYALIEYATLAEARAAIDDAHKAKLLDQSISVDF 137
Query: 166 AFSNGP 171
AF P
Sbjct: 138 AFVRPP 143
>gi|401881208|gb|EJT45510.1| hypothetical protein A1Q1_05956 [Trichosporon asahii var. asahii
CBS 2479]
Length = 133
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 71/106 (66%)
Query: 67 LADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRR 126
+AD + ++ + ++EGWII+VT ++EE E+DL++ F ++G ++NL + L+RR
Sbjct: 1 MADVDMDTGSSTHTVANMAAVEGWIIIVTNLNEETTEEDLEDHFADFGNVKNLSMALNRR 60
Query: 127 TGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPS 172
TG+V GYALIEY EEA+ AI A NG E L + + D+AF+ P+
Sbjct: 61 TGYVMGYALIEYATKEEAEAAIKATNGTEFLEKKINTDFAFAKPPA 106
>gi|347828376|emb|CCD44073.1| hypothetical protein [Botryotinia fuckeliana]
Length = 95
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 45/56 (80%)
Query: 112 EYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
++GEI+NLHLNLDRRTG+VKGYALIEY +EA+ AI + +LL QT+ VD+AF
Sbjct: 6 DFGEIKNLHLNLDRRTGYVKGYALIEYPTLDEARAAIDGAHNTKLLEQTVEVDFAF 61
>gi|302853531|ref|XP_002958280.1| hypothetical protein VOLCADRAFT_48595 [Volvox carteri f.
nagariensis]
gi|300256387|gb|EFJ40654.1| hypothetical protein VOLCADRAFT_48595 [Volvox carteri f.
nagariensis]
Length = 53
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 45/53 (84%), Gaps = 1/53 (1%)
Query: 87 IEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYE 139
+EGW++ +TGV+EEAQED+ F E+G+++N++LNLDR+ FVKGYAL+EY+
Sbjct: 1 VEGWVVFITGVNEEAQEDN-HEAFAEFGDVKNIYLNLDRQAVFVKGYALVEYK 52
>gi|300176245|emb|CBK23556.2| unnamed protein product [Blastocystis hominis]
Length = 50
Score = 69.3 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 37/47 (78%)
Query: 121 LNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAF 167
+N+DRRTGF+KGYAL+EYE FE+AQNAI + G +L Q + DWAF
Sbjct: 1 MNVDRRTGFIKGYALVEYETFEDAQNAIKNLEGSSILGQQIHADWAF 47
>gi|388857771|emb|CCF48665.1| related to RNA-binding protein 8A (N-terminal fragment), partial
[Ustilago hordei]
Length = 92
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 49 KTKGRGFREEADSERHSRLADRNFESLGT--DGGPGPQRSIEGWIILVTGVHEEAQEDDL 106
K +GRGF + + FE+L D +S+EGW+I+VT V+EEA E+++
Sbjct: 8 KRRGRGFDPRGNGPASEGVKAGRFETLNETRDSSARAVKSVEGWVIVVTNVNEEATEEEV 67
Query: 107 QNVFGEYGEIRNLHLNLDRRTGFVK 131
+ F ++G+I++ HLNLDRRTG+VK
Sbjct: 68 IDKFIDFGKIKSCHLNLDRRTGYVK 92
>gi|290982155|ref|XP_002673796.1| predicted protein [Naegleria gruberi]
gi|284087382|gb|EFC41052.1| predicted protein [Naegleria gruberi]
Length = 321
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 50/92 (54%)
Query: 83 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFE 142
P S++G+++ + + + L + ++G++ +LH L RRTG G AL++Y N +
Sbjct: 41 PVESVQGYVLFINNIDRNIDAETLTDTLSDFGQVISLHYELSRRTGLPIGLALVKYANLD 100
Query: 143 EAQNAITAMNGGELLTQTLTVDWAFSNGPSTG 174
+A+ A+ + G L ++ L DW F + P
Sbjct: 101 QAREALEGLRGKRLGSKVLQCDWCFKHPPQVS 132
>gi|321476905|gb|EFX87864.1| hypothetical protein DAPPUDRAFT_230293 [Daphnia pulex]
Length = 293
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 53/87 (60%)
Query: 84 QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEE 143
+R+ EG + VT + E A++ DLQ +FG GEI + L+ D+ TG +G+A + Y+ E+
Sbjct: 205 RRTDEGCTVRVTNLSENARDSDLQELFGRIGEISRIFLSKDKNTGQSRGFAFVSYKRRED 264
Query: 144 AQNAITAMNGGELLTQTLTVDWAFSNG 170
A+ AI +NG LTV+W+ +G
Sbjct: 265 AERAIKTLNGFGYDHLILTVEWSKPSG 291
>gi|389746476|gb|EIM87656.1| translation initiation factor 3 RNA-binding subunit [Stereum
hirsutum FP-91666 SS1]
Length = 298
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 73 ESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKG 132
ES+G GG G + + + VT + E+ QE+DL+++FG +G + +++ DR TG KG
Sbjct: 201 ESMGRPGGAGNRDDLP--TLRVTNISEDTQENDLRDLFGTFGRVARVYVGRDRETGIGKG 258
Query: 133 YALIEYENFEEAQNAITAMNGGELLTQTLTVDWA 166
+A + +E+ AQ A+ M+G + L V W+
Sbjct: 259 FAFVSFEDKSTAQKAMDKMHGRGYDSLILNVQWS 292
>gi|340377347|ref|XP_003387191.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-like [Amphimedon queenslandica]
Length = 288
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+A+E DL+ +FG +G I+ + L DR+T KG+A I + + E+AQ+AIT +
Sbjct: 208 VRVTNLSEDARESDLRELFGRFGPIQRVFLAKDRKTQQSKGFAFIHFSSKEDAQSAITNL 267
Query: 152 NGGELLTQTLTVDWAFSNGP 171
NG L V+WA + P
Sbjct: 268 NGFGYDHLILKVEWAKPSNP 287
>gi|414867082|tpg|DAA45639.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 216
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 88 EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
E + +LV V DDL +F YG++ ++++ D RTG +G+A + Y +EAQ+A
Sbjct: 14 ESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEAQDA 73
Query: 148 ITAMNGGELLTQTLTVDWAFSNGPST-----GPFKRKNMRPGRTHRSRSPRRRY 196
I ++G + L V +A GP+ G +N +P RSRSPR+RY
Sbjct: 74 IDGLDGMRFDGRALMVQFA-KYGPNAEKIHRGRITEENPKPRGRCRSRSPRQRY 126
>gi|414867083|tpg|DAA45640.1| TPA: hypothetical protein ZEAMMB73_077445 [Zea mays]
gi|448878222|gb|AGE46074.1| arginine/serine-rich splicing factor SC26 transcript III [Zea mays]
Length = 198
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 88 EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
E + +LV V DDL +F YG++ ++++ D RTG +G+A + Y +EAQ+A
Sbjct: 14 ESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEAQDA 73
Query: 148 ITAMNGGELLTQTLTVDWAFSNGPSTGPFKR-----KNMRPGRTHRSRSPRRRY 196
I ++G + L V +A GP+ R +N +P RSRSPR+RY
Sbjct: 74 IDGLDGMRFDGRALMVQFA-KYGPNAEKIHRGRITEENPKPRGRCRSRSPRQRY 126
>gi|443897423|dbj|GAC74764.1| hsp27-ere-tata-binding protein/Scaffold attachment factor
[Pseudozyma antarctica T-34]
Length = 285
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V+G+ + E DL+ FG+YG I+ + D T +G+A + YE E+A+ AITAM
Sbjct: 76 LHVSGLSKTTTERDLEEAFGKYGAIQRAQVMYDPHTREPRGFAFVTYEKAEDAEAAITAM 135
Query: 152 NGGELLTQTLTVDWA 166
NG + + +TVD A
Sbjct: 136 NGSDFQGRKITVDKA 150
>gi|428166035|gb|EKX35018.1| translation initiation factor 3, subunit G [Guillardia theta
CCMP2712]
Length = 351
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 78 DGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIE 137
DG GPQ E + VT V +A +D+ +F ++G I + + DR TG +G+A I+
Sbjct: 185 DGFGGPQEE-EKATLRVTNVSTDATREDMHELFKQFGPIARVSVPTDRATGEGRGFAFID 243
Query: 138 YENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ N E+AQ AI A+NG + L VDWA
Sbjct: 244 FYNREDAQRAINALNGTGFDSLILNVDWA 272
>gi|218245224|ref|YP_002370595.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|257058256|ref|YP_003136144.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
gi|218165702|gb|ACK64439.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|256588422|gb|ACU99308.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
Length = 94
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 49/75 (65%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E E DL +VFGEYG ++ +H+ +DR TG ++G+A +E E+ + +AI+ +
Sbjct: 3 IYVGNLAYEVTEADLNSVFGEYGSVKRVHVPMDRDTGRMRGFAFVEMESPSQEDSAISTL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + +TL V+ A
Sbjct: 63 DGAEWMGRTLKVNKA 77
>gi|425461447|ref|ZP_18840925.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
gi|389825682|emb|CCI24355.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
Length = 97
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E +DD+ VF EYG+I+ +HL +DR TG +G+A +E E EE AI A+
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAIAAL 62
Query: 152 NGGELLTQTLTVDWAFSNGPST 173
+G + + + L V+ A P +
Sbjct: 63 DGAQWMGRELKVNQAREKEPKS 84
>gi|432936678|ref|XP_004082225.1| PREDICTED: ELAV-like protein 1-like [Oryzias latipes]
Length = 342
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 55 FREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYG 114
+A R S ++ + +G+ G PG S GW I + + ++A E L +FG +G
Sbjct: 227 LHHQAQRFRFSPMSVDHMGGMGSVGVPG--NSTSGWCIFIYNLGQDADESILWQMFGPFG 284
Query: 115 EIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
+ N+ + D T KG+ + N+EEA AI ++NG L + L V + S G
Sbjct: 285 AVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTSKG 340
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y N +A+ AI+ +
Sbjct: 38 LIVNYLPQSMSQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNPSDAERAISTL 97
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 98 NGLRLQSKTIKVSYA---RPSSDTIKDANL 124
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + + D++++F YG I N + +D+ TG +G A I ++ EA+ A+ ++
Sbjct: 124 LYISGLPKNMTQKDVEDMFSCYGRIINSRVLVDQSTGMSRGVAFIRFDKRSEAEEAVKSL 183
Query: 152 NGGEL--LTQTLTVDWA 166
NG + +T+ +TV +A
Sbjct: 184 NGQKPPGVTEPITVKFA 200
>gi|425434339|ref|ZP_18814808.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9432]
gi|425450077|ref|ZP_18829909.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 7941]
gi|440751641|ref|ZP_20930844.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
gi|389676192|emb|CCH94745.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9432]
gi|389769258|emb|CCI05857.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 7941]
gi|440176134|gb|ELP55407.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
Length = 97
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E +DD+ VF EYG+I+ +HL +DR TG +G+A +E E EE AI A+
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAIAAL 62
Query: 152 NGGELLTQTLTVDWAFSNGPST 173
+G + + + L V+ A P +
Sbjct: 63 DGAQWMGRELKVNQAREREPKS 84
>gi|422304104|ref|ZP_16391453.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9806]
gi|389790787|emb|CCI13324.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9806]
Length = 97
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E +DD+ VF EYG+I+ +HL +DR TG +G+A +E E EE AI A+
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEEAKAIAAL 62
Query: 152 NGGELLTQTLTVDWAFSNGPS 172
+G + + + L V+ A P
Sbjct: 63 DGAQWMGRELKVNQAREREPK 83
>gi|345780008|ref|XP_532435.3| PREDICTED: RNA-binding protein 28 isoform 2 [Canis lupus
familiaris]
Length = 751
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + EDDL+ VFG+YG + L +N+ R+ G ++G+A ++++N EA A+ +
Sbjct: 116 LIIRNLSFKCSEDDLKTVFGQYGAV--LEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKS 173
Query: 151 MNGGELLTQTLTVDWAFSN 169
MN E+ +T+ VDWA +
Sbjct: 174 MNMKEIKGRTVAVDWAVAK 192
>gi|116781904|gb|ABK22291.1| unknown [Picea sitchensis]
Length = 306
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ +E DLQ +F +G I +++ +D+RTG +G+ + + N E+AQ AI +
Sbjct: 227 VRVTNLSEDTREADLQELFKPFGHITRVYVAVDQRTGMSRGFGFVNFANREDAQRAINKL 286
Query: 152 NGGELLTQTLTVDWA 166
NG L V+WA
Sbjct: 287 NGYGYDNLILRVEWA 301
>gi|159163852|pdb|2CQ0|A Chain A, Solution Structure Of Rna Binding Domain In Eukaryotic
Translation Initiation Factor 3 Subunit 4
Length = 103
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 76 GTDGGPGP-QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYA 134
G+ G GP +R+ + I VT + E+ +E DLQ +F +G I ++L D+ TG KG+A
Sbjct: 1 GSSGSSGPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFA 60
Query: 135 LIEYENFEEAQNAITAMNGGELLTQTLTVDWA---FSNGPSTG 174
I + E+A AI ++G L V+WA ++GPS+G
Sbjct: 61 FISFHRREDAARAIAGVSGFGYDHLILNVEWAKPSTNSGPSSG 103
>gi|300176090|emb|CBK23401.2| unnamed protein product [Blastocystis hominis]
Length = 259
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 49/78 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V G + ++QN+F +YG + ++H+ D T +G+A IE+EN E+A++AI+ +
Sbjct: 104 LIVRGFRDVVDRSEIQNIFSKYGNVHDVHIPRDYYTHKQRGFAFIEFENREQAEDAISHL 163
Query: 152 NGGELLTQTLTVDWAFSN 169
+G + T++V A +N
Sbjct: 164 DGRSVCGSTVSVSIAKNN 181
>gi|220909892|ref|YP_002485203.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
gi|219866503|gb|ACL46842.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
Length = 98
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + + ++DL FGEYG ++++HL DR TG V+G+A +E EN E AI A+
Sbjct: 3 IYVGNLSYDVTQNDLVRAFGEYGNVKSVHLPTDRETGRVRGFAFVEMENTPEETAAIEAL 62
Query: 152 NGGELLTQTLTVD 164
+G E + + L V+
Sbjct: 63 DGAEWMGRDLKVN 75
>gi|290462947|gb|ADD24521.1| Eukaryotic translation initiation factor 3 subunit G
[Lepeophtheirus salmonis]
Length = 288
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V+ + E QE D+Q +F +G I + L D++TG KG+A I Y EEA AI +
Sbjct: 209 IRVSNLSENTQESDVQELFKPFGAIARIFLAKDKQTGQCKGFAFIHYYKKEEAAKAIATL 268
Query: 152 NGGELLTQTLTVDWAFSNG 170
NG L+V+WA G
Sbjct: 269 NGYGYDYLILSVEWAKPTG 287
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%)
Query: 84 QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEE 143
QRS + + G+ + ED + FG++G+I+ + L DR TG KG+ +E+ + ++
Sbjct: 305 QRSAPAATLYLGGLSYDLNEDAVYEAFGDFGDIQRVSLPTDRETGAPKGFGYVEFADVDQ 364
Query: 144 AQNAITAMNGGELLTQTLTVDWA 166
A A+ AMNG EL + + VD++
Sbjct: 365 ATAALEAMNGKELSGRRIRVDYS 387
>gi|440910206|gb|ELR60031.1| ELAV-like protein 1, partial [Bos grunniens mutus]
Length = 330
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 10/131 (7%)
Query: 45 GAPKKTKGRGFREEADSERHSRLADRN----FESLGTDGGPG------PQRSIEGWIILV 94
G P + + FR+E+D + + ++ F +G D G P + GW I +
Sbjct: 193 GGPVHHQAQRFRQESDHDLQGQTKGKSKEGRFSPMGVDHMSGLSGVNVPGNASSGWCIFI 252
Query: 95 TGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGG 154
+ ++A E L +FG +G + N+ + D T KG+ + N+EEA AI ++NG
Sbjct: 253 YNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGY 312
Query: 155 ELLTQTLTVDW 165
L + L V +
Sbjct: 313 RLGDKILQVSF 323
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ AI +
Sbjct: 7 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 66
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 67 NGLRLQSKTIKVSYA---RPSSEVIKDANL 93
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 93 LYISGLPRNMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 152
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KN+ + SP RR+
Sbjct: 153 NGHKPPGSSEPITVKFA------ANPNQNKNVAL-LSQLYHSPARRF 192
>gi|348510833|ref|XP_003442949.1| PREDICTED: ELAV-like protein 1-like [Oreochromis niloticus]
Length = 341
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 66 RLADRNFESLGTDGGPG-PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLD 124
R + + +G+ GG P S GW I + + ++A E L +FG +G + N+ + D
Sbjct: 234 RFSPMGVDHMGSMGGVSVPGNSTSGWCIFIYNLGQDADESILWQMFGPFGAVTNVKVIRD 293
Query: 125 RRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
T KG+ + N+EEA AI ++NG L + L V + S G
Sbjct: 294 FNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTSKG 339
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y N +A+ AI+ +
Sbjct: 37 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNPSDAERAISTL 96
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 97 NGLRLQSKTIKVSYA---RPSSDTIKDANL 123
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 37/62 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + + D++++F YG I N + +D+ TG +G A I ++ EA+ A+ +
Sbjct: 123 LYISGLPKNMTQKDVEDMFSRYGRIINSRVLVDQGTGSSRGVAFIRFDKRAEAEEAVKNL 182
Query: 152 NG 153
NG
Sbjct: 183 NG 184
>gi|298492825|ref|YP_003723002.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
gi|298234743|gb|ADI65879.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
Length = 101
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + + EDDL+ F EYG++ + L DR TG ++G+A +E E ++ AI A+
Sbjct: 3 IYVGNLSYQVTEDDLKQAFAEYGKVSRVQLPTDRETGRLRGFAFVEMETEDQETAAIEAL 62
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHR 188
+G E + + L V+ A P T P GR+ R
Sbjct: 63 DGAEWMGRDLKVNKAKPREPRTSPRGNWGGSAGRSDR 99
>gi|302792100|ref|XP_002977816.1| ATP-binding cassette transporter, subfamily C, member 19, SmABCC19
[Selaginella moellendorffii]
gi|300154519|gb|EFJ21154.1| ATP-binding cassette transporter, subfamily C, member 19, SmABCC19
[Selaginella moellendorffii]
Length = 1494
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 79 GGPGPQRSI----EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYA 134
GG G + ++ +G + VT + E+ +E DLQ +FG +G I + + DR TG +G+A
Sbjct: 1388 GGAGSKETMRYRDDGNSLRVTNLSEDTREADLQELFGRFGSISRIFVASDRETGLGRGFA 1447
Query: 135 LIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKN 180
I + E+A+ A+ ++G + L V+WA P P K +N
Sbjct: 1448 FITFVRREDAERAMKKLDGYGYDSLILHVEWA---APRERPVKERN 1490
>gi|302812317|ref|XP_002987846.1| hypothetical protein SELMODRAFT_269321 [Selaginella moellendorffii]
gi|302824248|ref|XP_002993769.1| hypothetical protein SELMODRAFT_272337 [Selaginella moellendorffii]
gi|300138419|gb|EFJ05188.1| hypothetical protein SELMODRAFT_272337 [Selaginella moellendorffii]
gi|300144465|gb|EFJ11149.1| hypothetical protein SELMODRAFT_269321 [Selaginella moellendorffii]
Length = 287
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 28/140 (20%)
Query: 27 ASSSPRAPQPKLKSAITGGAPKKTKGRGFREEADSERHSRLADRNFESLGTDGGPGPQRS 86
AS +P P + ++ GGA + E DS RH D N
Sbjct: 171 ASGAPGKPTSYVPPSLRGGA---------KREGDSMRHGSRDDSNS-------------- 207
Query: 87 IEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQN 146
I VT + E+ +E DLQ +F +G I +++ DR TG +G+A I + N ++A
Sbjct: 208 -----IRVTNLSEDTREQDLQELFRPFGNISRIYVAFDRETGLSRGFAFINFVNRDDAVR 262
Query: 147 AITAMNGGELLTQTLTVDWA 166
AI ++G L V+WA
Sbjct: 263 AIKKLDGYGYDNLILRVEWA 282
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
S E ++ V V A ED L FGE+G+I ++ L DR TG +KG+ +E+ + E A+
Sbjct: 486 SAESKVLFVGNVSFNANEDMLWETFGEHGDIVSVRLPTDRETGQMKGFGYVEFTSVENAK 545
Query: 146 NAITAMNGGELLTQTLTVDWA 166
+A A+NG ++ + + +D++
Sbjct: 546 SAFNALNGKDIAGRNIRLDFS 566
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + ++ L++ F GE+ + +DR+TG KG+ + + E A+ AI M
Sbjct: 393 IFVGKLSWNVDDEWLKSEFEACGEVVRASVQMDRQTGRSKGFGYVSFSTPEAAEKAIAEM 452
Query: 152 NGGELLTQTLTVDWAFSNGPS 172
NG E+ + + V+ A P+
Sbjct: 453 NGKEIDGRAVNVNAATPKTPN 473
>gi|336374814|gb|EGO03150.1| hypothetical protein SERLA73DRAFT_174588 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387791|gb|EGO28935.1| hypothetical protein SERLADRAFT_456184 [Serpula lacrymans var.
lacrymans S7.9]
Length = 291
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 73 ESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKG 132
ES+G GG G + + + VT + E+ QE+DL+ +FG +G + +++ DR TG KG
Sbjct: 193 ESMGRAGGTGSRDDLP--TLRVTNISEDTQENDLRELFGGFGRVARVYVGRDRETGAGKG 250
Query: 133 YALIEYENFEEAQNAITAMNGGELLTQTLTVDWA 166
+A + +E+ AQ A+ ++G L+V W+
Sbjct: 251 FAFVSFEDRAVAQKAMEKVHGKGYDNLILSVQWS 284
>gi|354568550|ref|ZP_08987714.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353540273|gb|EHC09750.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 106
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + + +E+DL+ VF EYG ++ + L DR TG V+G+A +E ++ EE + AI A+
Sbjct: 3 IYVGNLSYQVREEDLREVFAEYGTVKKVQLPTDRDTGRVRGFAFVEMQSDEEEERAIEAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + + L V+ A
Sbjct: 63 DGAEWMGRDLKVNKA 77
>gi|449665135|ref|XP_002159315.2| PREDICTED: cleavage stimulation factor subunit 2-like [Hydra
magnipapillata]
Length = 413
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA +D L+++F + G + + L DR TG KGY EY++ E AQ+A+ +
Sbjct: 28 VFVGNIPYEASDDQLKDIFSQAGPVLSFRLVYDRETGKPKGYGFCEYKDSETAQSAMRNL 87
Query: 152 NGGELLTQTLTVDWAFSN 169
NG E+ + L VD A S
Sbjct: 88 NGTEIHGRQLRVDSAASQ 105
>gi|405951422|gb|EKC19336.1| Eukaryotic translation initiation factor 3 subunit G-A [Crassostrea
gigas]
Length = 1399
Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 19/140 (13%)
Query: 33 APQPKLKSAITGGAPKKTKGR----GFREEADSERHSRLADRNFESLGTDGGPGPQRSIE 88
AP P T AP KT G+ R+ + R ++ + ES
Sbjct: 265 APGPPTSQGPTAPAPTKTSGKYVPPSLRDGVNKGRGETMSSKRDESA------------- 311
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
I VT + E+ +E DLQ +F +G I+ ++L D+ TG KG+A I + E+A AI
Sbjct: 312 --TIRVTNLSEDTRESDLQELFRPFGPIQRIYLAKDKNTGQSKGFAFINFHRREDAARAI 369
Query: 149 TAMNGGELLTQTLTVDWAFS 168
++G L V+WA S
Sbjct: 370 AGVSGFGYDHLILNVEWAKS 389
>gi|388858649|emb|CCF48487.1| related to Transformer-2 protein homolog [Ustilago hordei]
Length = 346
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V+G+ + DL++ FG+YG I + D + +G+A + + E+A+ AITAM
Sbjct: 78 LHVSGLSNRTTDRDLEDAFGKYGAIERAQVMYDPHSREPRGFAFVTFVKAEDAEAAITAM 137
Query: 152 NGGELLTQTLTVDWA 166
NG E L + +TVD A
Sbjct: 138 NGTEFLGRKITVDKA 152
>gi|293334639|ref|NP_001169755.1| uncharacterized protein LOC100383636 [Zea mays]
gi|224031469|gb|ACN34810.1| unknown [Zea mays]
gi|414887660|tpg|DAA63674.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
gi|414887661|tpg|DAA63675.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 246
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 75 LGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYA 134
G G P P R + + +LV + DDL +F +YGEI ++++ DRRTG +G+A
Sbjct: 4 FGRSGPPPPIR--DTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFA 61
Query: 135 LIEYENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ Y+ +EAQ A+ ++G + + + V +A
Sbjct: 62 FVRYKYEDEAQKAVERLDGRLVDGREIMVQFA 93
>gi|166365958|ref|YP_001658231.1| RNA binding protein [Microcystis aeruginosa NIES-843]
gi|425466552|ref|ZP_18845850.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
gi|166088331|dbj|BAG03039.1| RNA binding protein [Microcystis aeruginosa NIES-843]
gi|389830907|emb|CCI26790.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
Length = 98
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E +DD+ VF EYGEI+ +HL +DR T +G+A +E E E+ AI A+
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGEIKRVHLPMDRETKRKRGFAFVEMETPEQEAKAIAAL 62
Query: 152 NGGELLTQTLTVDWAFSNGPST 173
+G + + + L V+ A P +
Sbjct: 63 DGAQWMGRELKVNQAREKEPRS 84
>gi|328859425|gb|EGG08534.1| hypothetical protein MELLADRAFT_84729 [Melampsora larici-populina
98AG31]
Length = 649
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%)
Query: 80 GPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYE 139
GPGP + V ++ +DDL+ VF +G+I + L+ D+ TG KGYA ++++
Sbjct: 423 GPGPNDPNSYARLYVGSLNFNLTDDDLRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFK 482
Query: 140 NFEEAQNAITAMNGGELLTQTLTVD 164
N +A+NA+ MNG +L + L V+
Sbjct: 483 NMHDAKNAMEKMNGFQLAGRALRVE 507
>gi|195999416|ref|XP_002109576.1| hypothetical protein TRIADDRAFT_9217 [Trichoplax adhaerens]
gi|190587700|gb|EDV27742.1| hypothetical protein TRIADDRAFT_9217, partial [Trichoplax
adhaerens]
Length = 74
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 43/63 (68%)
Query: 101 AQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQT 160
A +D +Q +F YG+++N+ + DR G +G+A IE+EN + A+NAI MNGG++ Q
Sbjct: 10 ATKDHVQEIFSNYGKVKNVDVPTDRANGLPRGFAYIEFENGKSAENAIKYMNGGQIDGQA 69
Query: 161 LTV 163
+TV
Sbjct: 70 VTV 72
>gi|383158051|gb|AFG61373.1| Pinus taeda anonymous locus 2_5255_01 genomic sequence
gi|383158053|gb|AFG61374.1| Pinus taeda anonymous locus 2_5255_01 genomic sequence
Length = 96
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ +E DLQ +F +G I +++ +D+RTG +G+ I + N E+AQ AI +
Sbjct: 17 VRVTNLSEDTREADLQELFKPFGHITRVYVAVDQRTGMSRGFGFINFANREDAQRAINKL 76
Query: 152 NGGELLTQTLTVDWA 166
NG L V+WA
Sbjct: 77 NGYGYDNLILRVEWA 91
>gi|49658982|emb|CAE01482.1| HUR [Tetraodon nigroviridis]
Length = 325
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 72 FESLGTD--GGPG----PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDR 125
F +G D GG G P S GW I + + +EA E L +FG +G + N+ + D
Sbjct: 219 FSPMGVDHMGGVGGVSVPTSSNNGWCIFIYNLGQEADETILWQMFGPFGAVTNVKVIRDF 278
Query: 126 RTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
T KG+ + N+E+A AI ++NG L + L V + S G
Sbjct: 279 NTNKCKGFGFVTMSNYEDAAMAIASLNGYRLGDKILQVSFKTSKG 323
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +++L+++F GE+ + L D+ G GY + Y N +A+ AI+ +
Sbjct: 21 LIVNYLPQNMSQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVNPSDAERAISTL 80
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++ + V +A PS+ K N+
Sbjct: 81 NGLRLQSKNIKVSYA---RPSSDTIKDANL 107
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 39/62 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + + D++++F ++G I N + +D+ TG +G A I ++ EA++AI +
Sbjct: 107 LYISGLPKSMTQKDVEDMFSQFGRIINSRVLVDQATGVSRGVAFIRFDKRAEAEDAINNL 166
Query: 152 NG 153
NG
Sbjct: 167 NG 168
>gi|226530532|ref|NP_001140562.1| uncharacterized protein LOC100272627 [Zea mays]
gi|194699996|gb|ACF84082.1| unknown [Zea mays]
gi|414590932|tpg|DAA41503.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 251
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 75 LGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYA 134
G G P P R + + +LV + DDL +F +YGEI ++++ DRRTG +G+A
Sbjct: 4 FGRSGPPPPIR--DTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFA 61
Query: 135 LIEYENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ Y+ +EAQ A+ ++G + + + V +A
Sbjct: 62 FVRYKYEDEAQKAVDRLDGRLVDGREIMVQFA 93
>gi|355715663|gb|AES05398.1| RNA binding motif protein 28 [Mustela putorius furo]
Length = 756
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + EDDL+ VF +YG + L +N+ R+ G ++G+A ++++N EA A+ +
Sbjct: 116 LIIRNLSFKCSEDDLKTVFAQYGAV--LEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKS 173
Query: 151 MNGGELLTQTLTVDWAFSN 169
MN E+ +T+ VDWA +
Sbjct: 174 MNMKEIKGRTVAVDWAVAK 192
>gi|353232427|emb|CCD79782.1| elav (embryonic lethal, abnormal vision,drosophila)-like protein
[Schistosoma mansoni]
Length = 535
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 75 LGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYA 134
+ + GG P GW I V + E +E +L ++FG +G ++++ + D KG+A
Sbjct: 256 IASTGGLTP----NGWCIFVYNLSPEVEESNLWHLFGPFGAVQSIKIIYDITNNKCKGFA 311
Query: 135 LIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPS 172
+ N+EEA AI ++NG L + L V + +N S
Sbjct: 312 FVTMSNYEEAVLAIHSLNGYVLDNRILQVSFKITNNKS 349
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
SI+G + ++G+ + ++++L+ +F +YG I + D +TG +G A I + + EA+
Sbjct: 72 SIKGANLYISGLPKTMKQNELEQLFSQYGRIITARILYDNKTGISRGVAFIRFNHRYEAE 131
Query: 146 NAITAMNGGEL--------LTQTLTVDWA 166
AI +NG +L L + +TV +A
Sbjct: 132 LAIQQLNGYQLPFEYSNDILNRPITVKFA 160
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%)
Query: 103 EDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLT 162
+++++ +F G+I + L D+ TG GYA ++Y + EAQ AI +NG L +T+
Sbjct: 3 QEEVRVLFSTCGQIESCKLIRDKLTGESLGYAFVKYSHSNEAQQAIHKLNGLSLQNKTIK 62
Query: 163 VDWAFSNGPS 172
V A N S
Sbjct: 63 VSLARPNCES 72
>gi|115473447|ref|NP_001060322.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|33146621|dbj|BAC79909.1| putative splicing factor, arginine/serine-rich 2 (Splicing factor
SC35) [Oryza sativa Japonica Group]
gi|113611858|dbj|BAF22236.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|215687327|dbj|BAG91873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637485|gb|EEE67617.1| hypothetical protein OsJ_25178 [Oryza sativa Japonica Group]
Length = 275
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
GP P R + + +LV + DDL +F +YGE+ ++++ DRRTG +G+A + Y
Sbjct: 7 SGPPPIR--DTYSLLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ +EAQ A+ ++G + + + V +A
Sbjct: 65 KYEDEAQKAVDRLDGRVVDGREIMVQFA 92
>gi|428203801|ref|YP_007082390.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427981233|gb|AFY78833.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 99
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I + + E EDDL+ VF +YG ++++ L +DR TG V+G+A +E + E AI A+
Sbjct: 3 IFIGNLPYEVSEDDLKQVFADYGTVKSVRLPMDRETGRVRGFAFVEMDTEAEETAAIQAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G + + ++L V A
Sbjct: 63 DGAKWIGRSLKVSKA 77
>gi|226501776|ref|NP_001148421.1| LOC100282036 [Zea mays]
gi|195619182|gb|ACG31421.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 218
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 88 EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
E + ILV V DDL +F YG++ ++++ D RTG +G+A + Y +EA++A
Sbjct: 16 ESFSILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEARDA 75
Query: 148 ITAMNGGELLTQTLTVDWAFSNGPST-----GPFKRKNMRPGRTHRSRSPR 193
I ++G + L V +A GP+ G +N +P RSRSPR
Sbjct: 76 IDGLDGXRFDGRALMVQFA-KYGPNAEKIHRGRITEENPKPRGRCRSRSPR 125
>gi|194708586|gb|ACF88377.1| unknown [Zea mays]
gi|414590930|tpg|DAA41501.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590931|tpg|DAA41502.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 238
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 75 LGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYA 134
G G P P R + + +LV + DDL +F +YGEI ++++ DRRTG +G+A
Sbjct: 4 FGRSGPPPPIR--DTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFA 61
Query: 135 LIEYENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ Y+ +EAQ A+ ++G + + + V +A
Sbjct: 62 FVRYKYEDEAQKAVDRLDGRLVDGREIMVQFA 93
>gi|444722723|gb|ELW63400.1| Poly(U)-binding-splicing factor PUF60 [Tupaia chinensis]
Length = 577
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 247 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 306
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 307 NLFDLGGQYLRVGKAVT 323
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 150 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 209
Query: 152 NGGEL 156
N L
Sbjct: 210 NSVML 214
>gi|301755236|ref|XP_002913467.1| PREDICTED: RNA-binding protein 28-like [Ailuropoda melanoleuca]
gi|281348807|gb|EFB24391.1| hypothetical protein PANDA_001275 [Ailuropoda melanoleuca]
Length = 751
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + EDDL+ VF +YG + L +N+ R+ G ++G+A ++++N EA A+ +
Sbjct: 116 LIIRNLSFKCSEDDLKTVFAQYGAV--LEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKS 173
Query: 151 MNGGELLTQTLTVDWAFSN 169
MN E+ +T+ VDWA +
Sbjct: 174 MNMKEIKGRTVAVDWAVAK 192
>gi|354491098|ref|XP_003507693.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Cricetulus
griseus]
Length = 582
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 251 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 310
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 311 NLFDLGGQYLRVGKAVT 327
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 154 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 213
Query: 152 NGGEL 156
N L
Sbjct: 214 NSVML 218
>gi|5524727|gb|AAD44358.1|AF165892_1 RNA-binding protein SiahBP [Rattus norvegicus]
Length = 565
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 234 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 293
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 294 NLFDLGGQYLRVGKAVT 310
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 137 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 196
Query: 152 N 152
N
Sbjct: 197 N 197
>gi|431911731|gb|ELK13879.1| RNA-binding protein 28 [Pteropus alecto]
Length = 758
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 8/87 (9%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + EDDL+ VF +YG + L +N+ ++ G ++G+A ++++N EA A+ +
Sbjct: 113 LIIRNLSFKCSEDDLKTVFAQYGAV--LEVNIPKKPDGKMRGFAFVQFKNLLEAGKALKS 170
Query: 151 MNGGELLTQTLTVDWA-----FSNGPS 172
MN E+ +T+ VDWA + N PS
Sbjct: 171 MNMKEIKGRTVAVDWAVAKDKYKNTPS 197
>gi|443328242|ref|ZP_21056842.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
gi|442792088|gb|ELS01575.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
Length = 92
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E ++DL VF EYG ++ +H+ DR TG V+G+A +E E+ + AI A+
Sbjct: 3 IYVGNLAYEINQEDLNEVFAEYGTVKRVHIPTDRETGRVRGFAFVEMESESDEDKAIAAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + ++L V+ A
Sbjct: 63 DGAEWMERSLKVNKA 77
>gi|256075727|ref|XP_002574168.1| elav (embryonic lethal abnormal vision drosophila)-like protein
[Schistosoma mansoni]
Length = 517
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 75 LGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYA 134
+ + GG P GW I V + E +E +L ++FG +G ++++ + D KG+A
Sbjct: 257 IASTGGLTP----NGWCIFVYNLSPEVEESNLWHLFGPFGAVQSIKIIYDITNNKCKGFA 312
Query: 135 LIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPS 172
+ N+EEA AI ++NG L + L V + +N S
Sbjct: 313 FVTMSNYEEAVLAIHSLNGYVLDNRILQVSFKITNNKS 350
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
SI+G + ++G+ + ++++L+ +F +YG I + D +TG +G A I + + EA+
Sbjct: 72 SIKGANLYISGLPKTMKQNELEQLFSQYGRIITARILYDNKTGISRGVAFIRFNHRYEAE 131
Query: 146 NAITAMNGGEL--------LTQTLTVDWA 166
AI +NG +L L + +TV +A
Sbjct: 132 LAIQQLNGYQLPFEYSNDILNRPITVKFA 160
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%)
Query: 103 EDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLT 162
+++++ +F G+I + L D+ TG GYA ++Y + EAQ AI +NG L +T+
Sbjct: 3 QEEVRVLFSTCGQIESCKLIRDKLTGESLGYAFVKYSHSNEAQQAIHKLNGLSLQNKTIK 62
Query: 163 VDWAFSNGPS 172
V A N S
Sbjct: 63 VSLARPNCES 72
>gi|348555826|ref|XP_003463724.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
PUF60-like [Cavia porcellus]
Length = 564
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 230 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 289
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 290 NLFDLGGQYLRVGKAVT 306
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 133 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 192
Query: 152 N 152
N
Sbjct: 193 N 193
>gi|254424446|ref|ZP_05038164.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
gi|196191935|gb|EDX86899.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
Length = 84
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + + +DDL +VFGEYG ++ + L DR TG V+G+A ++ + EE Q AI A+
Sbjct: 3 VYVGNLSYDVTQDDLNSVFGEYGTVKRVTLPTDRETGRVRGFAFVDLSSDEEEQAAIEAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + + L V+ A
Sbjct: 63 DGAEWMGRDLRVNKA 77
>gi|395329951|gb|EJF62336.1| hypothetical protein DICSQDRAFT_104771 [Dichomitus squalens
LYAD-421 SS1]
Length = 311
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V G+H + E D+ +F +YGEI +++L D+ TG KG+A + YE+ A+ +
Sbjct: 33 IFVGGLHRDLTEGDVITIFSQYGEIMDINLPRDKETGKQKGFAFLMYEDQRSTILAVDNL 92
Query: 152 NGGELLTQTLTVD 164
NG ++L +TL VD
Sbjct: 93 NGAQVLDRTLRVD 105
>gi|343427687|emb|CBQ71214.1| related to Transformer-2 protein homolog [Sporisorium reilianum
SRZ2]
Length = 341
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
S G + V+G+ + + DL+ FG+YG I+ + D + +G+A + +E E+A+
Sbjct: 69 SNPGNNLHVSGLSKGTTDRDLEEAFGKYGPIQKAQVMYDPHSREPRGFAFVTFEKAEDAE 128
Query: 146 NAITAMNGGELLTQTLTVDWA 166
AITAMN E L + +TV+ A
Sbjct: 129 AAITAMNNTEFLGRKITVEKA 149
>gi|443917389|gb|ELU38114.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 131
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT V E+ QEDDL+++F ++G + +++ DR TG KGYA + +E A+ A+ +
Sbjct: 49 LRVTNVSEDTQEDDLRDLFSKFGRVARVYVGRDRETGAGKGYAFVSFEEKANAERAMQKV 108
Query: 152 NGGELLTQTLTVDWAFSNGPSTG 174
+G L+V W+ P G
Sbjct: 109 HGMGYDNLILSVQWSQPREPRAG 131
>gi|168064593|ref|XP_001784245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664211|gb|EDQ50939.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878415|gb|AGE46170.1| arginine/serine-rich splicing factor SC37 transcript I
[Physcomitrella patens subsp. patens]
gi|448878417|gb|AGE46171.1| arginine/serine-rich splicing factor SC37 transcript II
[Physcomitrella patens subsp. patens]
Length = 319
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ +EAQ AI ++G E+ + + V +A
Sbjct: 65 KYADEAQKAIERLDGREVDGRHIVVQFA 92
>gi|218200049|gb|EEC82476.1| hypothetical protein OsI_26921 [Oryza sativa Indica Group]
Length = 271
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
GP P R + + +LV + DDL +F +YGE+ ++++ DRRTG +G+A + Y
Sbjct: 7 SGPPPIR--DTYSLLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ +EAQ A+ ++G + + + V +A
Sbjct: 65 KYEDEAQKAVDRLDGRVVDGREIMVQFA 92
>gi|392562711|gb|EIW55891.1| translation initiation factor 3 RNA-binding subunit [Trametes
versicolor FP-101664 SS1]
Length = 292
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ QE+DL+++FG +G + +++ DR TG KG+A + +E AQ A+ M
Sbjct: 212 LRVTNISEDTQENDLRDLFGVFGRVARVYVGRDRETGAGKGFAFVSFEEKSSAQKAMEKM 271
Query: 152 NGGELLTQTLTVDWA 166
+G L+V W+
Sbjct: 272 HGRGYDNLILSVQWS 286
>gi|443897539|dbj|GAC74879.1| translation initiation factor 3, subunit g [Pseudozyma antarctica
T-34]
Length = 308
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+A +DDL+ +FG +G + +++ DR TG KGYA + +E E+A A +
Sbjct: 227 LRVTNLSEDADDDDLRELFGRFGRVVRVYVGRDRETGICKGYAFVSFETREDADRARQKV 286
Query: 152 NGGELLTQTLTVDWAFSNG 170
+G L+ W+ G
Sbjct: 287 DGRGYDNLILSCQWSLPRG 305
>gi|410987958|ref|XP_004000259.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Felis catus]
Length = 502
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 171 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 230
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 231 NLFDLGGQYLRVGKAVT 247
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 74 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 133
Query: 152 NGGEL 156
N L
Sbjct: 134 NSVML 138
>gi|355714554|gb|AES05042.1| poly-U binding splicing factor 60KDa [Mustela putorius furo]
Length = 314
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 229 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 288
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 289 NLFDLGGQYLRVGKAVT 305
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 132 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 191
Query: 152 NGGEL 156
N L
Sbjct: 192 NSVML 196
>gi|351698432|gb|EHB01351.1| Poly(U)-binding-splicing factor PUF60, partial [Heterocephalus
glaber]
Length = 556
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 225 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 284
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 285 NLFDLGGQYLRVGKAVT 301
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 128 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 187
Query: 152 NGGEL 156
N L
Sbjct: 188 NSVML 192
>gi|74203983|dbj|BAE28998.1| unnamed protein product [Mus musculus]
Length = 564
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 233 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 292
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 293 NLFDLGGQYLRVGKAVT 309
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 97 VHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMN 152
++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ MN
Sbjct: 141 IYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMN 196
>gi|218263153|ref|ZP_03477372.1| hypothetical protein PRABACTJOHN_03053 [Parabacteroides johnsonii
DSM 18315]
gi|423341699|ref|ZP_17319414.1| hypothetical protein HMPREF1077_00844 [Parabacteroides johnsonii
CL02T12C29]
gi|218222938|gb|EEC95588.1| hypothetical protein PRABACTJOHN_03053 [Parabacteroides johnsonii
DSM 18315]
gi|409220587|gb|EKN13542.1| hypothetical protein HMPREF1077_00844 [Parabacteroides johnsonii
CL02T12C29]
Length = 102
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I +TG++ + DL ++F EYGEI + + +DR TG +G+ +E N + Q AI A+
Sbjct: 3 IYITGLNYSINDADLNDLFAEYGEITSAKVIMDRETGRSRGFGFVEMVNDGDGQKAIDAL 62
Query: 152 NGGELLTQTLTVDWA--FSNGPSTGPFKRK 179
NG E + ++V A S PS G ++ +
Sbjct: 63 NGAEFEKKVISVSVARPRSEKPSNGGYRER 92
>gi|148697576|gb|EDL29523.1| RIKEN cDNA 2410104I19, isoform CRA_d [Mus musculus]
Length = 553
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 222 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 281
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 282 NLFDLGGQYLRVGKAVT 298
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 125 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 184
Query: 152 NGGEL 156
N L
Sbjct: 185 NSVML 189
>gi|229367642|gb|ACQ58801.1| Cold-inducible RNA-binding protein [Anoplopoma fimbria]
Length = 179
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ + G+ E E+ L FG+YG I + + DR T +G+ ++Y+N E+A++A+ M
Sbjct: 7 LFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDRETEKSRGFGFVKYDNAEDAKDAMDGM 66
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPF 176
NG L +T+ VD A G S G F
Sbjct: 67 NGQTLDGRTIRVDEAGKGGRSRGNF 91
>gi|448878220|gb|AGE46073.1| arginine/serine-rich splicing factor SC26 transcript II [Zea mays]
Length = 129
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 88 EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
E + +LV V DDL +F YG++ ++++ D RTG +G+A + Y +EAQ+A
Sbjct: 16 ESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEAQDA 75
Query: 148 ITAMNGGELLTQTLTVDWAFSNGPST-----GPFKRKNMRPGRTHRSRSPR 193
I ++G + L V +A GP+ G +N +P RSRSPR
Sbjct: 76 IDGLDGMRFDGRALMVQFA-KYGPNAEKIHRGRITEENPKPRGRCRSRSPR 125
>gi|432091266|gb|ELK24470.1| RNA-binding protein 28 [Myotis davidii]
Length = 762
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + EDDL+ +F +YG + L +N+ R+ G ++G+A ++++N EA A+ +
Sbjct: 116 LIIRNLSFKCSEDDLKTIFAQYGAV--LEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKS 173
Query: 151 MNGGELLTQTLTVDWAFSN 169
MN E+ +T+ VDWA +
Sbjct: 174 MNMKEIKGRTVAVDWAVAK 192
>gi|257196183|ref|NP_082640.2| poly(U)-binding-splicing factor PUF60 isoform a [Mus musculus]
gi|158563798|sp|Q3UEB3.2|PUF60_MOUSE RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor
gi|158563997|sp|Q9WV25.2|PUF60_RAT RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor; AltName:
Full=RNA-binding protein Siah-BP; AltName:
Full=Siah-binding protein 1
gi|148697573|gb|EDL29520.1| RIKEN cDNA 2410104I19, isoform CRA_a [Mus musculus]
gi|149066142|gb|EDM16015.1| siah binding protein 1; FBP interacting repressor; pyrimidine tract
binding splicing factor; Ro ribonucleoprotein-binding
protein 1, isoform CRA_a [Rattus norvegicus]
Length = 564
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 233 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 292
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 293 NLFDLGGQYLRVGKAVT 309
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 136 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 195
Query: 152 N 152
N
Sbjct: 196 N 196
>gi|395860112|ref|XP_003802359.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1
[Otolemur garnettii]
Length = 558
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 227 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 286
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 287 NLFDLGGQYLRVGKAVT 303
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 130 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 189
Query: 152 NGGEL 156
N L
Sbjct: 190 NSVML 194
>gi|380810662|gb|AFE77206.1| poly(U)-binding-splicing factor PUF60 isoform a [Macaca mulatta]
gi|383416607|gb|AFH31517.1| poly(U)-binding-splicing factor PUF60 isoform a [Macaca mulatta]
Length = 560
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 229 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 288
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 289 NLFDLGGQYLRVGKAVT 305
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 132 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 191
Query: 152 NGGEL 156
N L
Sbjct: 192 NSVML 196
>gi|17978512|ref|NP_510965.1| poly(U)-binding-splicing factor PUF60 isoform a [Homo sapiens]
gi|397497388|ref|XP_003819493.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Pan
paniscus]
gi|402879352|ref|XP_003903307.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Papio
anubis]
gi|441648299|ref|XP_004090873.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Nomascus
leucogenys]
gi|74761960|sp|Q9UHX1.1|PUF60_HUMAN RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor; AltName:
Full=FUSE-binding protein-interacting repressor;
Short=FBP-interacting repressor; AltName:
Full=Ro-binding protein 1; Short=RoBP1; AltName:
Full=Siah-binding protein 1; Short=Siah-BP1
gi|6684440|gb|AAF23589.1|AF114818_1 Ro ribonucleoprotein-binding protein 1 [Homo sapiens]
gi|48146403|emb|CAG33424.1| SIAHBP1 [Homo sapiens]
gi|119602593|gb|EAW82187.1| fuse-binding protein-interacting repressor, isoform CRA_d [Homo
sapiens]
gi|158258178|dbj|BAF85062.1| unnamed protein product [Homo sapiens]
gi|410220384|gb|JAA07411.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
gi|410303418|gb|JAA30309.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
Length = 559
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 228 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 287
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 288 NLFDLGGQYLRVGKAVT 304
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 131 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 190
Query: 152 NGGEL 156
N L
Sbjct: 191 NSVML 195
>gi|448878218|gb|AGE46072.1| arginine/serine-rich splicing factor SC26 transcript I [Zea mays]
Length = 218
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 88 EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
E + ILV V DDL +F YG++ ++++ D RTG +G+A + Y +EA++A
Sbjct: 16 ESFSILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEARDA 75
Query: 148 ITAMNGGELLTQTLTVDWAFSNGPST-----GPFKRKNMRPGRTHRSRSPR 193
I ++G + L V +A GP+ G +N +P RSRSPR
Sbjct: 76 IDGLDGMRFDGRALMVQFA-KYGPNAEKIHRGRITEENPKPRGRCRSRSPR 125
>gi|395860114|ref|XP_003802360.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2
[Otolemur garnettii]
Length = 542
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 211 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 270
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 271 NLFDLGGQYLRVGKAVT 287
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 114 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 173
Query: 152 NGGEL 156
N L
Sbjct: 174 NSVML 178
>gi|395512680|ref|XP_003760563.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Sarcophilus
harrisii]
Length = 553
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 222 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 281
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 282 NLFDLGGQYLRVGKAVT 298
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 125 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 184
Query: 152 NGGEL 156
N L
Sbjct: 185 NSVML 189
>gi|358391435|gb|EHK40839.1| hypothetical protein TRIATDRAFT_28798 [Trichoderma atroviride IMI
206040]
Length = 326
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 56 REEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGE 115
R E ++ R+SR A R + G G + V +H + E+DL +F G
Sbjct: 61 RYEENTYRNSRAAPRRRRDSPSGG------DARGTRLRVENIHYDLTEEDLDELFRRIGP 114
Query: 116 IRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGP 175
I L L D R+G +G A + YE+ E+A AI +G Q + + A S+GPS P
Sbjct: 115 ISKLQLRYD-RSGRSEGVAFVTYEDKEDAAEAIKQFDGANANGQPIRL-TALSSGPSRNP 172
Query: 176 FKRKNM----------RPGRTHRSRSPRRRY 196
F M PG RS SP RRY
Sbjct: 173 FDTAVMPGKPLSERISAPGGRSRSLSPHRRY 203
>gi|417402731|gb|JAA48201.1| Putative polypyrimidine tract-binding protein puf60 rrm superfamily
[Desmodus rotundus]
Length = 558
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 227 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 286
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 287 NLFDLGGQYLRVGKAVT 303
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 130 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 189
Query: 152 NGGEL 156
N L
Sbjct: 190 NSVML 194
>gi|410927510|ref|XP_003977185.1| PREDICTED: ELAV-like protein 1-like [Takifugu rubripes]
Length = 341
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 66 RLADRNFESLGTDGGPG-PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLD 124
R + + + +G GG P S GW I + + +EA E L +FG +G + N+ + D
Sbjct: 234 RFSPMSVDHMGGVGGVSVPTNSNNGWCIFIYNLGQEADETILWQMFGPFGAVTNVKVIRD 293
Query: 125 RRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
T KG+ + N+E+A AI ++NG L + L V + S G
Sbjct: 294 FTTNKCKGFGFVTMSNYEDAAMAIASLNGYRLGEKILQVSFKTSKG 339
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +++L+++F GE+ + L D+ G GY + Y +A+ AI +
Sbjct: 37 LIVNYLPQNMSQEELRSLFSSIGEVESAKLIRDKIAGHSLGYGFVNYVTPSDAERAINTL 96
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++ + V +A PS+ K N+
Sbjct: 97 NGLRLQSKNIKVSYA---RPSSDTIKDANL 123
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + + D++++F +G I N + +D+ TG +G A I ++ EA++A+ +
Sbjct: 123 LYISGLPKSMTQKDVEDMFSRFGRIINSRVLVDQATGASRGVAFIRFDKRAEAEDAVNNL 182
Query: 152 NGGEL--LTQTLTVDWA 166
NG + + + +TV +A
Sbjct: 183 NGQKPSGVVEPITVKFA 199
>gi|1809248|gb|AAB41656.1| siah binding protein 1 [Homo sapiens]
Length = 541
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 210 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 269
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 270 NLFDLGGQYLRVGKAVT 286
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 113 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 172
Query: 152 N 152
N
Sbjct: 173 N 173
>gi|300798352|ref|NP_001178809.1| poly(U)-binding-splicing factor PUF60 [Rattus norvegicus]
Length = 563
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 232 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 291
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 292 NLFDLGGQYLRVGKAVT 308
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 135 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 194
Query: 152 N 152
N
Sbjct: 195 N 195
>gi|440911935|gb|ELR61552.1| Poly(U)-binding-splicing factor PUF60, partial [Bos grunniens
mutus]
Length = 561
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 223 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 282
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 283 NLFDLGGQYLRVGKAVT 299
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 126 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 185
Query: 152 N 152
N
Sbjct: 186 N 186
>gi|297300235|ref|XP_001087851.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 5 [Macaca
mulatta]
Length = 542
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 211 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 270
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 271 NLFDLGGQYLRVGKAVT 287
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 114 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 173
Query: 152 NGGEL 156
N L
Sbjct: 174 NSVML 178
>gi|402794118|ref|NP_001258025.1| poly(U)-binding-splicing factor PUF60 isoform d [Homo sapiens]
gi|119602600|gb|EAW82194.1| fuse-binding protein-interacting repressor, isoform CRA_k [Homo
sapiens]
Length = 541
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 210 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 269
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 270 NLFDLGGQYLRVGKAVT 286
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 113 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 172
Query: 152 NGGEL 156
N L
Sbjct: 173 NSVML 177
>gi|417404448|gb|JAA48976.1| Putative nucleolar protein fibrillarin nop77 rrm superfamily
[Desmodus rotundus]
Length = 763
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + EDDL+ +F +YG + L +N+ R+ G ++G+A ++++N EA A+ +
Sbjct: 116 LIIRNLSFKCSEDDLKTIFAQYGAV--LEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKS 173
Query: 151 MNGGELLTQTLTVDWAFSN 169
MN E+ +T+ VDWA +
Sbjct: 174 MNMKEIKGRTIAVDWAVAK 192
>gi|340383337|ref|XP_003390174.1| PREDICTED: ELAV-like protein 3-like [Amphimedon queenslandica]
Length = 392
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 75 LGTDGGPGPQR--SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKG 132
LGTD PGPQ + ++V + + E+ L+ +F ++G + + L D+ +G G
Sbjct: 7 LGTDENPGPQNPETKAKTNLIVNYLPQTLTEEGLKQLFSQFGVVLSCKLIKDKSSGISLG 66
Query: 133 YALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
Y + Y + EEA++AI MNG L ++TL V +A PS+ K N+
Sbjct: 67 YGFVNYGSAEEAEHAIQKMNGTTLESKTLKVSYA---RPSSVAIKNANV 112
Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 41/76 (53%)
Query: 90 WIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAIT 149
+ + V + E Q+ L +F +G I ++++ D ++G K Y + +++E+A +AI
Sbjct: 312 YCVFVYNLPETCQDFLLYQLFSPFGAITSVNVIRDLKSGLCKRYGFVNMKSYEDACSAIM 371
Query: 150 AMNGGELLTQTLTVDW 165
+NG +TL V +
Sbjct: 372 TLNGYVHDGKTLQVSF 387
Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
+I+ + V + + +L +F YG I + D TG +G + ++ + +A+
Sbjct: 106 AIKNANVYVANLPPQLSLTELDALFQPYGTIITSKVLTDEDTGAGRGVGFVRFDKYTQAE 165
Query: 146 NAITAMNGGELL--TQTLTVDWA 166
AI A+NG +L+ TQ L V +A
Sbjct: 166 VAIAALNGKQLVGGTQPLLVKFA 188
>gi|332831342|ref|XP_528257.3| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Pan
troglodytes]
Length = 559
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 228 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 287
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 288 NLFDLGGQYLRVGKAVT 304
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 131 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 190
Query: 152 NGGEL 156
N L
Sbjct: 191 NSVML 195
>gi|6176532|gb|AAF05605.1|AF190744_1 poly-U binding splicing factor PUF60 [Homo sapiens]
Length = 556
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 225 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 284
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 285 NLFDLGGQYLRVGKAVT 301
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 128 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 187
Query: 152 N 152
N
Sbjct: 188 N 188
>gi|73974710|ref|XP_857040.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 6 [Canis
lupus familiaris]
Length = 543
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 212 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 271
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 272 NLFDLGGQYLRVGKAVT 288
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 115 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 174
Query: 152 NGGEL 156
N L
Sbjct: 175 NSVML 179
>gi|417402525|gb|JAA48108.1| Putative polypyrimidine tract-binding protein puf60 rrm superfamily
[Desmodus rotundus]
Length = 541
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 210 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 269
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 270 NLFDLGGQYLRVGKAVT 286
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 113 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 172
Query: 152 NGGEL 156
N L
Sbjct: 173 NSVML 177
>gi|332831344|ref|XP_003312009.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Pan
troglodytes]
Length = 542
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 211 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 270
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 271 NLFDLGGQYLRVGKAVT 287
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 114 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 173
Query: 152 NGGEL 156
N L
Sbjct: 174 NSVML 178
>gi|320165216|gb|EFW42115.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 570
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 46 APKKTKGRGFREEADSE---------RHSRLADRNFESLGTDGGPGPQRSI------EGW 90
AP + KG GF E E H+R+ DR + GT P P + + EG
Sbjct: 234 APTRHKGFGFVEYEYPESGDIVLSQMHHARIGDRQLK-FGTPNAPQPMQVLIEELRKEGS 292
Query: 91 I---ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
+ V +H E E D++ VF +G + L +D TG KG +++E+ + A++A
Sbjct: 293 TFPHVFVANIHPELSESDIREVFQSFGPVAYCILMVDLVTGRHKGCGYVQFESLQTAKDA 352
Query: 148 ITAMN----GGELL 157
I A+N GG LL
Sbjct: 353 IAALNRLDLGGLLL 366
>gi|148697575|gb|EDL29522.1| RIKEN cDNA 2410104I19, isoform CRA_c [Mus musculus]
Length = 546
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 215 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 274
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 275 NLFDLGGQYLRVGKAVT 291
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 118 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 177
Query: 152 N 152
N
Sbjct: 178 N 178
>gi|390475872|ref|XP_002759200.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1
[Callithrix jacchus]
Length = 563
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 232 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 291
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 292 NLFDLGGQYLRVGKAVT 308
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 135 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 194
Query: 152 NGGEL 156
N L
Sbjct: 195 NSVML 199
>gi|359321052|ref|XP_848710.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Canis
lupus familiaris]
Length = 560
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 229 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 288
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 289 NLFDLGGQYLRVGKAVT 305
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 132 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 191
Query: 152 NGGEL 156
N L
Sbjct: 192 NSVML 196
>gi|335310331|ref|XP_003361983.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Sus scrofa]
Length = 362
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 112 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 171
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 172 NLFDLGGQYLRVGKAVT 188
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 15 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 74
Query: 152 N 152
N
Sbjct: 75 N 75
>gi|197100546|ref|NP_001127017.1| poly(U)-binding-splicing factor PUF60 [Pongo abelii]
gi|75040908|sp|Q5R469.1|PUF60_PONAB RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor
gi|55733539|emb|CAH93447.1| hypothetical protein [Pongo abelii]
Length = 558
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 227 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 286
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 287 NLFDLGGQYLRVGKAVT 303
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 130 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 189
Query: 152 NGGEL 156
N L
Sbjct: 190 NSVML 194
>gi|76677895|ref|NP_598452.2| poly(U)-binding-splicing factor PUF60 isoform b [Mus musculus]
gi|74195824|dbj|BAE30474.1| unnamed protein product [Mus musculus]
gi|74221976|dbj|BAE40622.1| unnamed protein product [Mus musculus]
gi|148697574|gb|EDL29521.1| RIKEN cDNA 2410104I19, isoform CRA_b [Mus musculus]
gi|149066143|gb|EDM16016.1| siah binding protein 1; FBP interacting repressor; pyrimidine tract
binding splicing factor; Ro ribonucleoprotein-binding
protein 1, isoform CRA_b [Rattus norvegicus]
Length = 547
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 216 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 275
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 276 NLFDLGGQYLRVGKAVT 292
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 119 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 178
Query: 152 N 152
N
Sbjct: 179 N 179
>gi|67923998|ref|ZP_00517451.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416401054|ref|ZP_11687154.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|67854173|gb|EAM49479.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357262154|gb|EHJ11338.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 81
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E +E+DL VF EYG ++ +H+ D+ TG +G+A +E E E +AI +
Sbjct: 3 IYVGNLSYEVKEEDLNEVFAEYGTVKRVHVPTDKETGRPRGFAFVELETKAEESSAIETL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + +T+ VD A
Sbjct: 63 DGAEWMGRTMKVDEA 77
>gi|403175151|ref|XP_003889057.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171476|gb|EHS64385.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 80 GPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYE 139
GPGP + V ++ +DD++ VF +G+I + L+ D+ TG KGYA ++++
Sbjct: 440 GPGPNDPNSYARLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFK 499
Query: 140 NFEEAQNAITAMNGGELLTQTLTVD 164
N +A+NA+ MNG +L + L V+
Sbjct: 500 NMHDAKNAMEKMNGFQLAGRALRVE 524
>gi|297300233|ref|XP_001087975.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 6 [Macaca
mulatta]
Length = 559
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 228 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 287
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 288 NLFDLGGQYLRVGKAVT 304
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 131 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 190
Query: 152 NGGEL 156
N L
Sbjct: 191 NSVML 195
>gi|380810660|gb|AFE77205.1| poly(U)-binding-splicing factor PUF60 isoform b [Macaca mulatta]
gi|383416605|gb|AFH31516.1| poly(U)-binding-splicing factor PUF60 isoform b [Macaca mulatta]
Length = 543
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 212 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 271
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 272 NLFDLGGQYLRVGKAVT 288
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 115 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 174
Query: 152 NGGEL 156
N L
Sbjct: 175 NSVML 179
>gi|402794155|ref|NP_001258027.1| poly(U)-binding-splicing factor PUF60 isoform f [Homo sapiens]
gi|119602601|gb|EAW82195.1| fuse-binding protein-interacting repressor, isoform CRA_l [Homo
sapiens]
Length = 558
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 227 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 286
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 287 NLFDLGGQYLRVGKAVT 303
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 130 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 189
Query: 152 NGGEL 156
N L
Sbjct: 190 NSVML 194
>gi|17298690|ref|NP_055096.2| poly(U)-binding-splicing factor PUF60 isoform b [Homo sapiens]
gi|397497390|ref|XP_003819494.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Pan
paniscus]
gi|402879354|ref|XP_003903308.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Papio
anubis]
gi|441648302|ref|XP_004090874.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Nomascus
leucogenys]
gi|17152040|gb|AAF27522.2|AF217197_1 FBP-interacting repressor [Homo sapiens]
gi|14250810|gb|AAH08875.1| Poly-U binding splicing factor 60KDa [Homo sapiens]
gi|119602594|gb|EAW82188.1| fuse-binding protein-interacting repressor, isoform CRA_e [Homo
sapiens]
gi|410220382|gb|JAA07410.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
gi|410303416|gb|JAA30308.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
Length = 542
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 211 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 270
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 271 NLFDLGGQYLRVGKAVT 287
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 114 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 173
Query: 152 NGGEL 156
N L
Sbjct: 174 NSVML 178
>gi|301773444|ref|XP_002922145.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
PUF60-like [Ailuropoda melanoleuca]
Length = 577
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 237 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 296
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 297 NLFDLGGQYLRVGKAVT 313
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 140 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 199
Query: 152 N 152
N
Sbjct: 200 N 200
>gi|320165239|gb|EFW42138.1| hypothetical protein CAOG_07523 [Capsaspora owczarzaki ATCC 30864]
Length = 598
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 23/161 (14%)
Query: 19 EDGTADVDASSSPRAPQPKLKSAITGGAPKKTKGRGFREEADSE---------RHSRLAD 69
E G +V A+ S P + AP + KG GF E E H+R+ D
Sbjct: 220 EAGEREVRAAMSECGPIRSVSFVNDPVAPTRHKGFGFVEYEYPESGDIVLSQMHHARIGD 279
Query: 70 RNFESLGTDGGPGPQRSI------EGWI---ILVTGVHEEAQEDDLQNVFGEYGEIRNLH 120
R + GT P P + + EG + V +H E E D++ VF +G +
Sbjct: 280 RQLK-FGTPNAPQPMQVLIEELRKEGSTFPHVFVANIHPELSESDIREVFQSFGPVAYCI 338
Query: 121 LNLDRRTGFVKGYALIEYENFEEAQNAITAMN----GGELL 157
L +D TG KG +++E+ + A++AI A+N GG LL
Sbjct: 339 LMVDLVTGRHKGCGYVQFESLQTAKDAIAALNRLDLGGLLL 379
>gi|71897303|ref|NP_001026551.1| poly(U)-binding-splicing factor PUF60 [Gallus gallus]
gi|60098673|emb|CAH65167.1| hypothetical protein RCJMB04_5e8 [Gallus gallus]
Length = 366
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 185 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 244
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 245 NLFDLGGQYLRVGKAVT 261
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 88 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 147
Query: 152 NGGEL 156
N L
Sbjct: 148 NSVML 152
>gi|432915990|ref|XP_004079241.1| PREDICTED: cold-inducible RNA-binding protein-like [Oryzias
latipes]
Length = 174
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ + G+ E ED L FG+YG I + + D+ TG +G+ ++Y+N E+A++A+ AM
Sbjct: 7 LFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNVEDAKDALDAM 66
Query: 152 NGGELLTQTLTVD---------WAFSNGP 171
NG L + + VD FS+GP
Sbjct: 67 NGKTLDGRAIRVDEAGKGGRARGGFSSGP 95
>gi|355698276|gb|EHH28824.1| 60 kDa poly(U)-binding-splicing factor [Macaca mulatta]
Length = 568
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 237 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 296
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 297 NLFDLGGQYLRVGKAVT 313
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 140 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 199
Query: 152 N 152
N
Sbjct: 200 N 200
>gi|241087427|ref|XP_002409192.1| translation initiation factor 3, subunit G, putative [Ixodes
scapularis]
gi|215492661|gb|EEC02302.1| translation initiation factor 3, subunit G, putative [Ixodes
scapularis]
Length = 277
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 88 EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
E I VT + E+ ++ DLQ++F +G+I ++L D+ TG KG+A I + + E+A A
Sbjct: 193 EAATIRVTNLSEDVRDSDLQDLFRPFGQIARIYLAKDKVTGQSKGFAFINFVHREDAARA 252
Query: 148 ITAMNGGELLTQTLTVDWAFSNG 170
I +++G LTV+WA +G
Sbjct: 253 IASVHGFGYDNLILTVEWAKPSG 275
>gi|403178034|ref|XP_003336468.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173310|gb|EFP92049.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 80 GPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYE 139
GPGP + V ++ +DD++ VF +G+I + L+ D+ TG KGYA ++++
Sbjct: 440 GPGPNDPNSYARLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFK 499
Query: 140 NFEEAQNAITAMNGGELLTQTLTVD 164
N +A+NA+ MNG +L + L V+
Sbjct: 500 NMHDAKNAMEKMNGFQLAGRALRVE 524
>gi|403302944|ref|XP_003942108.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 509
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 185 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 244
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 245 NLFDLGGQYLRVGKAVT 261
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 88 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 147
Query: 152 NGGEL 156
N L
Sbjct: 148 NSVML 152
>gi|355780002|gb|EHH64478.1| 60 kDa poly(U)-binding-splicing factor [Macaca fascicularis]
Length = 521
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 211 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 270
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 271 NLFDLGGQYLRVGKAVT 287
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 114 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 173
Query: 152 NGGEL 156
N L
Sbjct: 174 NSVML 178
>gi|111185612|gb|AAI19438.1| Puf60 protein [Mus musculus]
gi|152060991|gb|AAI48275.1| Puf60 protein [Mus musculus]
Length = 241
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 142 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 201
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 202 NLFDLGGQYLRVGKAVT 218
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 45 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 104
Query: 152 NGGEL 156
N L
Sbjct: 105 NSVML 109
>gi|257196186|ref|NP_001158072.1| poly(U)-binding-splicing factor PUF60 isoform c [Mus musculus]
gi|14714891|gb|AAH10601.1| Puf60 protein [Mus musculus]
Length = 499
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 168 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 227
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 228 NLFDLGGQYLRVGKAVT 244
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 71 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 130
Query: 152 NGGEL 156
N L
Sbjct: 131 NSVML 135
>gi|431908112|gb|ELK11715.1| Poly(U)-binding-splicing factor PUF60 [Pteropus alecto]
Length = 501
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 170 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 229
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 230 NLFDLGGQYLRVGKAVT 246
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 73 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 132
Query: 152 NGGEL 156
N L
Sbjct: 133 NSVML 137
>gi|338728499|ref|XP_003365686.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like isoform 2
[Equus caballus]
Length = 516
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 185 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 244
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 245 NLFDLGGQYLRVGKAVT 261
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 88 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 147
Query: 152 NGGEL 156
N L
Sbjct: 148 NSVML 152
>gi|114051121|ref|NP_001039598.1| poly(U)-binding-splicing factor PUF60 [Bos taurus]
gi|122144872|sp|Q2HJG2.1|PUF60_BOVIN RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor
gi|88682957|gb|AAI05448.1| Poly-U binding splicing factor 60KDa [Bos taurus]
Length = 530
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 199 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 258
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 259 NLFDLGGQYLRVGKAVT 275
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 102 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 161
Query: 152 NGGEL 156
N L
Sbjct: 162 NSVML 166
>gi|326497011|dbj|BAK02090.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521620|dbj|BAK00386.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 288
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 55/97 (56%)
Query: 70 RNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGF 129
R +++ DGG +R + + VT + E+ +E DL +F +G + +++ LD+RTG
Sbjct: 186 RRTDAVYHDGGHDMRRRNDENSVRVTNLSEDTREPDLLELFRSFGPVSRVYVALDQRTGS 245
Query: 130 VKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWA 166
+G+ + + E+A+NAI+ +NG L V+WA
Sbjct: 246 SRGFGFVNFVQREDAENAISKLNGYGYDNLILHVEWA 282
>gi|402794180|ref|NP_001258028.1| poly(U)-binding-splicing factor PUF60 isoform g [Homo sapiens]
gi|426360971|ref|XP_004047701.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Gorilla
gorilla gorilla]
gi|441648312|ref|XP_003280819.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1
[Nomascus leucogenys]
Length = 530
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 199 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 258
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 259 NLFDLGGQYLRVGKAVT 275
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 102 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 161
Query: 152 NGGEL 156
N L
Sbjct: 162 NSVML 166
>gi|209862867|ref|NP_001129505.1| poly(U)-binding-splicing factor PUF60 isoform c [Homo sapiens]
gi|109087696|ref|XP_001087604.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 3 [Macaca
mulatta]
gi|441648305|ref|XP_004090875.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Nomascus
leucogenys]
gi|15030041|gb|AAH11265.1| PUF60 protein [Homo sapiens]
gi|15080471|gb|AAH11979.1| PUF60 protein [Homo sapiens]
gi|119602595|gb|EAW82189.1| fuse-binding protein-interacting repressor, isoform CRA_f [Homo
sapiens]
Length = 516
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 185 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 244
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 245 NLFDLGGQYLRVGKAVT 261
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 88 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 147
Query: 152 NGGEL 156
N L
Sbjct: 148 NSVML 152
>gi|303324711|pdb|2KXF|A Chain A, Solution Structure Of The First Two Rrm Domains Of
Fbp-Interacting Repressor (Fir)
gi|303324712|pdb|2KXH|A Chain A, Solution Structure Of The First Two Rrm Domains Of Fir In
The Complex With Fbp Nbox Peptide
Length = 199
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 113 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 172
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 173 NLFDLGGQYLRVGKAVT 189
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 16 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 75
Query: 152 NGGEL 156
N L
Sbjct: 76 NSVML 80
>gi|301773130|ref|XP_002921959.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Ailuropoda
melanoleuca]
Length = 339
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 45 GAPKKTKGRGFREEADSERHSRLADRNFESLGTDGGPG------PQRSIEGWIILVTGVH 98
G P + + FR RH+ + F +G D G P + GW I + +
Sbjct: 208 GGPVHHQAQRFRWVG--RRHAASGVQRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLG 265
Query: 99 EEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLT 158
++A E L +FG +G + N+ + D T KG+ + N+EEA AI ++NG L
Sbjct: 266 QDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGD 325
Query: 159 QTLTVDW 165
+ L V +
Sbjct: 326 KILQVSF 332
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ AI +
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 82 NGLRLQSKTIKVSYA---RPSSEVIKDANL 108
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 152 NG 153
NG
Sbjct: 168 NG 169
>gi|449495396|ref|XP_002188522.2| PREDICTED: poly(U)-binding-splicing factor PUF60 [Taeniopygia
guttata]
Length = 514
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 185 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 244
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 245 NLFDLGGQYLRVGKAVT 261
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 88 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 147
Query: 152 NGGEL 156
N L
Sbjct: 148 NSVML 152
>gi|238006960|gb|ACR34515.1| unknown [Zea mays]
gi|413925185|gb|AFW65117.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|413925186|gb|AFW65118.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878198|gb|AGE46062.1| arginine/serine-rich splicing factor SC30 transcript I [Zea mays]
gi|448878204|gb|AGE46065.1| arginine/serine-rich splicing factor SC30 transcript IV [Zea mays]
Length = 264
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPG 184
+ +EAQ AI ++G ++ + + V +A GP+ P ++ ++ G
Sbjct: 65 KYADEAQKAIDRLDGRDVDGRNIMVQFA-KYGPNAEPIRKGRVKEG 109
>gi|410042304|ref|XP_003951412.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 530
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 199 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 258
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 259 NLFDLGGQYLRVGKAVT 275
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 102 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 161
Query: 152 NGGEL 156
N L
Sbjct: 162 NSVML 166
>gi|207079925|ref|NP_001128734.1| DKFZP468L0227 protein [Pongo abelii]
gi|402794126|ref|NP_001258026.1| poly(U)-binding-splicing factor PUF60 isoform e [Homo sapiens]
gi|426360969|ref|XP_004047700.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Gorilla
gorilla gorilla]
gi|441648309|ref|XP_003280820.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2
[Nomascus leucogenys]
gi|55725023|emb|CAH89379.1| hypothetical protein [Pongo abelii]
Length = 513
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 182 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 241
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 242 NLFDLGGQYLRVGKAVT 258
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 85 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 144
Query: 152 NGGEL 156
N L
Sbjct: 145 NSVML 149
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 47/72 (65%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V +H + EDDL+ VF +G+I+ ++L++D TG KG+A ++Y++ E+A+ A+
Sbjct: 273 LYVGNLHTDLAEDDLRTVFEPFGDIQQINLHIDPETGRSKGFAFVQYKSPEDAKKALQHC 332
Query: 152 NGGELLTQTLTV 163
NG EL + L V
Sbjct: 333 NGMELAGRQLKV 344
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ + + A E +L FG+ G++ ++ L DR + KG+ IEY + A+ +
Sbjct: 171 VFASNLPIRASESELFEFFGKAGKVHDIRLITDRNSRKSKGFGYIEYLDKSSVPLALHQL 230
Query: 152 NGGELLTQTLTV 163
NG + QT+ V
Sbjct: 231 NGTQCKGQTVLV 242
>gi|410042300|ref|XP_003951410.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 516
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 185 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 244
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 245 NLFDLGGQYLRVGKAVT 261
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 88 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 147
Query: 152 NGGEL 156
N L
Sbjct: 148 NSVML 152
>gi|212550891|ref|YP_002309208.1| RNA-binding protein RbpA [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549129|dbj|BAG83797.1| putative RNA-binding protein RbpA [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 98
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I + G+ +DDL+N+F YG + + + +DR+T KGY +E E+ EEA+ AI +
Sbjct: 3 IFIAGLSFRLNDDDLKNLFESYGTVSSARVIIDRQTSRSKGYGFVEMEDDEEARKAIAEL 62
Query: 152 NGGELLTQTLTVDWA 166
NG E +T++V A
Sbjct: 63 NGSEFDERTISVSEA 77
>gi|296480748|tpg|DAA22863.1| TPA: poly(U)-binding-splicing factor PUF60 [Bos taurus]
Length = 530
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 199 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 258
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 259 NLFDLGGQYLRVGKAVT 275
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 102 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 161
Query: 152 NGGEL 156
N L
Sbjct: 162 NSVML 166
>gi|410042302|ref|XP_003951411.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 513
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 182 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 241
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 242 NLFDLGGQYLRVGKAVT 258
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 85 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 144
Query: 152 NGGEL 156
N L
Sbjct: 145 NSVML 149
>gi|403302946|ref|XP_003942109.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 492
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 168 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 227
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 228 NLFDLGGQYLRVGKAVT 244
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 71 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 130
Query: 152 NGGEL 156
N L
Sbjct: 131 NSVML 135
>gi|326918217|ref|XP_003205387.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Meleagris
gallopavo]
Length = 516
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 185 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 244
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 245 NLFDLGGQYLRVGKAVT 261
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 88 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 147
Query: 152 NGGEL 156
N L
Sbjct: 148 NSVML 152
>gi|281341440|gb|EFB17024.1| hypothetical protein PANDA_011097 [Ailuropoda melanoleuca]
Length = 512
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 185 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 244
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 245 NLFDLGGQYLRVGKAVT 261
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 88 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 147
Query: 152 NGGEL 156
N L
Sbjct: 148 NSVML 152
>gi|323450994|gb|EGB06873.1| hypothetical protein AURANDRAFT_9018, partial [Aureococcus
anophagefferens]
Length = 91
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 103 EDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLT 162
E +L++VFG+YGEI+++HL DR TG ++G+A + Y + + +A+ AMN G + +TL
Sbjct: 3 ERELRDVFGKYGEIKDVHLPTDRETGRLRGFAFLSYNDTRDCDDALAAMN-GRVGGRTLR 61
Query: 163 VDWAFSNGPSTG 174
V A G G
Sbjct: 62 VSKAQPRGSGAG 73
>gi|402794208|ref|NP_001258029.1| poly(U)-binding-splicing factor PUF60 isoform h [Homo sapiens]
gi|109087698|ref|XP_001087484.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Macaca
mulatta]
gi|332263566|ref|XP_003280822.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 4
[Nomascus leucogenys]
gi|16307289|gb|AAH09734.1| PUF60 protein [Homo sapiens]
gi|119602596|gb|EAW82190.1| fuse-binding protein-interacting repressor, isoform CRA_g [Homo
sapiens]
gi|261859062|dbj|BAI46053.1| poly-U binding splicing factor 60KDa [synthetic construct]
Length = 499
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 168 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 227
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 228 NLFDLGGQYLRVGKAVT 244
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 71 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 130
Query: 152 NGGEL 156
N L
Sbjct: 131 NSVML 135
>gi|338728501|ref|XP_001496155.3| PREDICTED: poly(U)-binding-splicing factor PUF60-like isoform 1
[Equus caballus]
Length = 499
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 168 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 227
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 228 NLFDLGGQYLRVGKAVT 244
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 71 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 130
Query: 152 NGGEL 156
N L
Sbjct: 131 NSVML 135
>gi|410042306|ref|XP_003951413.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 499
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 168 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 227
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 228 NLFDLGGQYLRVGKAVT 244
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 71 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 130
Query: 152 NGGEL 156
N L
Sbjct: 131 NSVML 135
>gi|224032171|gb|ACN35161.1| unknown [Zea mays]
gi|413925183|gb|AFW65115.1| splicing factor, arginine/serine-rich 2 isoform 1 [Zea mays]
gi|413925184|gb|AFW65116.1| splicing factor, arginine/serine-rich 2 isoform 2 [Zea mays]
gi|448878210|gb|AGE46068.1| arginine/serine-rich splicing factor SC30 transcript VII [Zea mays]
Length = 256
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPG 184
+ +EAQ AI ++G ++ + + V +A GP+ P ++ ++ G
Sbjct: 65 KYADEAQKAIDRLDGRDVDGRNIMVQFA-KYGPNAEPIRKGRVKEG 109
>gi|448878212|gb|AGE46069.1| arginine/serine-rich splicing factor SC30 transcript VIII [Zea
mays]
Length = 261
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPG 184
+ +EAQ AI ++G ++ + + V +A GP+ P ++ ++ G
Sbjct: 65 KYADEAQKAIDRLDGRDVDGRNIMVQFA-KYGPNAEPIRKGRVKEG 109
>gi|426235336|ref|XP_004011640.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
PUF60 [Ovis aries]
Length = 506
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 182 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 241
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 242 NLFDLGGQYLRVGKAVT 258
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 85 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 144
Query: 152 NGGEL 156
N L
Sbjct: 145 NSVML 149
>gi|410924411|ref|XP_003975675.1| PREDICTED: cold-inducible RNA-binding protein-like [Takifugu
rubripes]
Length = 170
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ + G+ E E+ L FG+YG I + + D+ TG +G+ ++YE+ E+A++A+TAM
Sbjct: 7 LFIGGLSFETNEESLAEAFGKYGTIEKVDVIRDKETGRSRGFGFVKYESVEDAKDAMTAM 66
Query: 152 NGGELLTQTLTVDWA 166
NG L + + VD A
Sbjct: 67 NGKSLDGRAIRVDEA 81
>gi|416401897|ref|ZP_11687293.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|357261987|gb|EHJ11191.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 94
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 49/75 (65%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + + ++DL+ VF EYG ++ +H+ DR +G V+G+A +E ++ ++ Q AI+ +
Sbjct: 3 IYVGNLSYDVNKEDLEEVFTEYGSVKRVHIPKDRESGRVRGFAFVEMDSDDQEQEAISTL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + +TL V+ A
Sbjct: 63 DGAEWMGRTLKVNKA 77
>gi|343425033|emb|CBQ68570.1| related to TIF35-translation initiation factor eIF3 subunit
[Sporisorium reilianum SRZ2]
Length = 308
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+A +DDL+ +F +G + +++ DR TG KGYA + +EN E+A A +
Sbjct: 227 LRVTNLSEDADDDDLRELFMHFGRVVRVYVGRDRETGICKGYAFVSFENREDADRARQKV 286
Query: 152 NGGELLTQTLTVDWAFSNG 170
+G L+ W+ G
Sbjct: 287 DGRGYDNLILSCQWSLPRG 305
>gi|331247744|ref|XP_003336499.1| hypothetical protein PGTG_18170 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309315489|gb|EFP92080.1| hypothetical protein PGTG_18170 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 299
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 94 VTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNG 153
VT + E+ QE DL ++FG +G I +++ D+ TG KG+A + +E+ EA+ A+ +NG
Sbjct: 218 VTNLSEDVQESDLWDLFGRFGRISRIYVGKDQETGLCKGFAFVSFEDRMEAERAMKKING 277
Query: 154 GELLTQTLTVDWAFSNG 170
L W+ G
Sbjct: 278 LPYDHLILGCMWSLPRG 294
>gi|413925182|gb|AFW65114.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
Length = 268
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPG 184
+ +EAQ AI ++G ++ + + V +A GP+ P ++ ++ G
Sbjct: 65 KYADEAQKAIDRLDGRDVDGRNIMVQFA-KYGPNAEPIRKGRVKEG 109
>gi|331242687|ref|XP_003333989.1| hypothetical protein PGTG_15719 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312979|gb|EFP89570.1| hypothetical protein PGTG_15719 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 299
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 94 VTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNG 153
VT + E+ QE DL ++FG +G I +++ D+ TG KG+A + +E+ EA+ A+ +NG
Sbjct: 218 VTNLSEDVQESDLWDLFGRFGRISRIYVGKDQETGLCKGFAFVSFEDRMEAERAMKKING 277
Query: 154 GELLTQTLTVDWAFSNG 170
L W+ G
Sbjct: 278 LPYDHLILGCMWSLPRG 294
>gi|299755304|ref|XP_002912089.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
gi|298411164|gb|EFI28595.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
Length = 580
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%)
Query: 83 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFE 142
P + G I+ V +H E D++ VF +GE+ + L+ D TG KGYA ++Y+ E
Sbjct: 348 PGVTASGAILYVGSLHFNLTESDIKQVFEPFGELEFVDLHKDPMTGRSKGYAFVQYKRAE 407
Query: 143 EAQNAITAMNGGELLTQTLTVDWAFSNG 170
+A+ A+ M G EL +TL V+ G
Sbjct: 408 DARMALEQMEGFELAGRTLRVNTVHEKG 435
>gi|242035597|ref|XP_002465193.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
gi|241919047|gb|EER92191.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
Length = 216
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 90 WIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAIT 149
+ +LV V DDL +F YGE+ ++H+ DRRTG +G+A + Y +EAQ+AI
Sbjct: 16 FSLLVLNVSFRTTADDLFPLFDRYGEVVDIHIPRDRRTGESRGFAFVRYNYEDEAQDAID 75
Query: 150 AMNGGELLTQTLTVDWA 166
++G + L V +A
Sbjct: 76 GLDGMRFGGRALMVQFA 92
>gi|448878206|gb|AGE46066.1| arginine/serine-rich splicing factor SC30 transcript V [Zea mays]
Length = 262
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPG 184
+ +EAQ AI ++G ++ + + V +A GP+ P ++ ++ G
Sbjct: 65 KYADEAQKAIDRLDGRDVDGRNIMVQFA-KYGPNAEPIRKGRVKEG 109
>gi|448878200|gb|AGE46063.1| arginine/serine-rich splicing factor SC30 transcript II [Zea mays]
Length = 254
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPG 184
+ +EAQ AI ++G ++ + + V +A GP+ P ++ ++ G
Sbjct: 65 KYADEAQKAIDRLDGRDVDGRNIMVQFA-KYGPNAEPIRKGRVKEG 109
>gi|388497012|gb|AFK36572.1| unknown [Medicago truncatula]
Length = 280
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ +E DL +FG +G + +++ +D+ TG +G+ + + N E+AQ AI +
Sbjct: 201 VRVTNLSEDTREPDLHELFGTFGSVSRVYVAIDKNTGTSRGFGFVNFVNREDAQRAINKL 260
Query: 152 NGGELLTQTLTVDWA 166
NG L V+WA
Sbjct: 261 NGYGYDNLILKVEWA 275
>gi|169404577|pdb|2QFJ|A Chain A, Crystal Structure Of First Two Rrm Domains Of Fir Bound To
Ssdna From A Portion Of Fuse
gi|169404578|pdb|2QFJ|B Chain B, Crystal Structure Of First Two Rrm Domains Of Fir Bound To
Ssdna From A Portion Of Fuse
Length = 216
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 128 IYVASVHQDLSDDDIKSVFEAFGKIKSATLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 187
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 188 NLFDLGGQYLRVGKAVT 204
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 31 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 90
Query: 152 N 152
N
Sbjct: 91 N 91
>gi|327290985|ref|XP_003230202.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Anolis
carolinensis]
Length = 541
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 207 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 266
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 267 NLFDLGGQYLRVGKAVT 283
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 110 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 169
Query: 152 NGGEL 156
N L
Sbjct: 170 NSVML 174
>gi|426201409|gb|EKV51332.1| hypothetical protein AGABI2DRAFT_189584 [Agaricus bisporus var.
bisporus H97]
Length = 563
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
G I+ V +H E D++ VF +GE+ + L+ D TG KGYA ++Y+ E+A+ A+
Sbjct: 336 GAILYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAFVQYKRAEDARMAL 395
Query: 149 TAMNGGELLTQTLTVDWAFSNG 170
M G EL +TL V+ G
Sbjct: 396 QQMEGFELAGRTLRVNTVHEKG 417
>gi|409083550|gb|EKM83907.1| hypothetical protein AGABI1DRAFT_110515 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 563
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
G I+ V +H E D++ VF +GE+ + L+ D TG KGYA ++Y+ E+A+ A+
Sbjct: 336 GAILYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAFVQYKRAEDARMAL 395
Query: 149 TAMNGGELLTQTLTVDWAFSNG 170
M G EL +TL V+ G
Sbjct: 396 QQMEGFELAGRTLRVNTVHEKG 417
>gi|427738497|ref|YP_007058041.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
gi|427373538|gb|AFY57494.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
Length = 95
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E ++ L VF EYG ++ + + DR TG V+G+A +E E+ + + AI A+
Sbjct: 3 IYVGNLSYEVSQEGLNEVFAEYGTVKRVQIPTDRETGRVRGFAFVEMESEADEEKAIEAL 62
Query: 152 NGGELLTQTLTVDWAF--SNGPSTGPFKRKN 180
+G E + +TL V+ A N S+G +R N
Sbjct: 63 DGAEWMERTLKVNKAMPRENRSSSGGGRRNN 93
>gi|344236628|gb|EGV92731.1| Poly(U)-binding-splicing factor PUF60 [Cricetulus griseus]
Length = 271
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 168 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 227
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 228 NLFDLGGQYLRVGKAVT 244
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 71 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 130
Query: 152 NGGEL 156
N L
Sbjct: 131 NSVML 135
>gi|260800797|ref|XP_002595283.1| hypothetical protein BRAFLDRAFT_283255 [Branchiostoma floridae]
gi|229280528|gb|EEN51295.1| hypothetical protein BRAFLDRAFT_283255 [Branchiostoma floridae]
Length = 311
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 76 GTDGGPG---PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKG 132
G + GPG QR + I VT + E+ +E DLQ +F +G I ++L D+ T KG
Sbjct: 212 GANRGPGESMAQRRDDQATIRVTNLSEDTRESDLQELFRPFGAISRIYLAKDKVTHQSKG 271
Query: 133 YALIEYENFEEAQNAITAMNGGELLTQTLTVDWA 166
+A I + E+A AIT +NG L V+WA
Sbjct: 272 FAFINFHRREDAARAITGVNGFGYDNLILNVEWA 305
>gi|449667931|ref|XP_002156035.2| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Hydra
magnipapillata]
Length = 597
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V+ +H + E D+++VF +GEI + L D+ TG KGY IEY N A +AI AM
Sbjct: 238 IYVSSIHPDLSESDIKSVFEAFGEILSCKLAPDQLTGKHKGYGFIEYANQSSANDAIVAM 297
Query: 152 NGGELLTQTLTV-------DWAFSNGP 171
N +L Q + V D A GP
Sbjct: 298 NLFDLGGQYIRVGRAITPPDHALKQGP 324
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 94 VTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNG 153
+ ++ + E+ ++ F +G I+ + L+ D T KG+A +EYE E AQ A+ MN
Sbjct: 143 IGSINFQLNEESVRASFLPFGPIKMIDLSWDSATMKHKGFAFVEYEIPEAAQLALEQMNN 202
Query: 154 GELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTH 187
+ + + V SN P P+ + ++ R +
Sbjct: 203 VLMGGRNIKVGRP-SNVPQAAPWIEQILQEARQY 235
>gi|425442381|ref|ZP_18822630.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
gi|389716645|emb|CCH99152.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
Length = 98
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E ++D+ VF EYGEI+ +HL +DR T +G+A +E E E+ AI A+
Sbjct: 3 IYVGNLPFEVDQEDVVEVFKEYGEIKRVHLPMDRETKRKRGFAFVEMETPEQEAKAIAAL 62
Query: 152 NGGELLTQTLTVDWAFSNGPST 173
+G + + + L V+ A P +
Sbjct: 63 DGAQWMGRELKVNQAREKEPRS 84
>gi|388513995|gb|AFK45059.1| unknown [Medicago truncatula]
Length = 229
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ +E DL +FG +G + +++ +D+ TG +G+ + + N E+AQ AI +
Sbjct: 150 VRVTNLSEDTREPDLHELFGTFGSVSRVYVAIDKNTGTSRGFGFVNFVNREDAQRAINKL 209
Query: 152 NGGELLTQTLTVDWA 166
NG L V+WA
Sbjct: 210 NGYGYDNLILKVEWA 224
>gi|209155462|gb|ACI33963.1| ELAV-like protein 1 [Salmo salar]
Length = 342
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 16/166 (9%)
Query: 19 EDGTADVDASSSPRAPQP-KLKSAITGGAPKKTK---------GRGF----REEADSERH 64
ED D++ P + +P +K A + K T+ GR F +A R
Sbjct: 177 EDAIKDLNGQKPPGSAEPITVKFAASPNQAKNTQLISQLYHNQGRRFGGPVHHQAQRFRF 236
Query: 65 SRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLD 124
S ++ + G G P + GW I + + ++A E L +FG +G + N+ + D
Sbjct: 237 SPMSVDHMS--GMSGVSLPGNATSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRD 294
Query: 125 RRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
T KG+ + N+EEA AI ++NG L + L V + S G
Sbjct: 295 FNTNKCKGFGFVTMTNYEEAAMAIGSLNGYRLGDKILQVSFKTSKG 340
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y +A+ AI +
Sbjct: 38 LIVNYLPQSMSQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLTPSDAERAINTL 97
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 98 NGLRLQSKTIKVSYA---RPSSDTIKDANL 124
Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 38/62 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + + D++++F YG I N + +D+ +G +G A I ++ EA++AI +
Sbjct: 124 LYISGLPKTMTQKDVEDMFARYGRIINSRVLVDQASGLSRGVAFIRFDKRAEAEDAIKDL 183
Query: 152 NG 153
NG
Sbjct: 184 NG 185
>gi|226510383|ref|NP_001140384.1| hypothetical protein [Zea mays]
gi|194699256|gb|ACF83712.1| unknown [Zea mays]
gi|413925181|gb|AFW65113.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878214|gb|AGE46070.1| arginine/serine-rich splicing factor SC30 transcript IX [Zea mays]
Length = 274
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPG 184
+ +EAQ AI ++G ++ + + V +A GP+ P ++ ++ G
Sbjct: 65 KYADEAQKAIDRLDGRDVDGRNIMVQFA-KYGPNAEPIRKGRVKEG 109
>gi|71019737|ref|XP_760099.1| hypothetical protein UM03952.1 [Ustilago maydis 521]
gi|74701184|sp|Q4P7G1.1|EIF3G_USTMA RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|46099864|gb|EAK85097.1| hypothetical protein UM03952.1 [Ustilago maydis 521]
Length = 308
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+A +DDL+ +F +G + +++ DR TG KGYA + +EN E+A A +
Sbjct: 227 LRVTNLSEDADDDDLRELFMRFGRVVRVYVGRDRETGICKGYAFVSFENREDADRARQKV 286
Query: 152 NGGELLTQTLTVDWAFSNG 170
+G L+ W+ G
Sbjct: 287 DGRGYDNLILSCQWSLPRG 305
>gi|156366101|ref|XP_001626979.1| predicted protein [Nematostella vectensis]
gi|156213874|gb|EDO34879.1| predicted protein [Nematostella vectensis]
Length = 335
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 88 EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
+GW I V G+ +EA L +F YG I N+ L LD KGY + N+EEA +A
Sbjct: 253 QGWCIFVYGLPQEATPLFLYKLFSPYGAITNIELKLD------KGYGFVNMSNYEEACHA 306
Query: 148 ITAMNGGELLTQTLTVDW 165
I +NG + L V +
Sbjct: 307 ICCLNGTPQHGKILQVSF 324
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+++ V ++D++ +FG G + + L DR TG GYA + Y+N ++A A+ M
Sbjct: 12 LIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREM 71
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L +TL V +A PS+ K N+
Sbjct: 72 NGARLQNKTLKVSFA---RPSSTEIKNANL 98
>gi|209152513|gb|ACI33116.1| ELAV-like protein 1 [Salmo salar]
Length = 374
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 16/166 (9%)
Query: 19 EDGTADVDASSSPRAPQP-KLKSAITGGAPKKTK---------GRGF----REEADSERH 64
ED D++ P A +P +K A + K ++ GR F +A R
Sbjct: 208 EDAIKDLNGQKPPGASEPITVKFAASPNQAKNSQLINQLYHNQGRRFGGPVHHQAQRFRF 267
Query: 65 SRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLD 124
S ++ + + T G S GW I + + ++A E L +FG +G + N+ + D
Sbjct: 268 SPMSVDHMSGMSTVSAQG--NSTAGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRD 325
Query: 125 RRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
T KG+ + N+EEA AI ++NG + + L V + S G
Sbjct: 326 FNTNKCKGFGFVTMTNYEEAAMAIASLNGYRIGDKILQVSFKTSKG 371
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + + D++++F YG I N + +D+ +G +G A I ++ EA++AI +
Sbjct: 155 LYISGLPKTMTQKDVEDMFTRYGRIINSRVLVDQASGLSRGVAFIRFDKRAEAEDAIKDL 214
Query: 152 NGGEL--LTQTLTVDWAFS 168
NG + ++ +TV +A S
Sbjct: 215 NGQKPPGASEPITVKFAAS 233
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTG--------FVKGYALIEYENFEE 143
++V + + +D+L+++F GE+ + L D+ G GY + Y N +
Sbjct: 61 LIVNYLPQNMSQDELRSLFSSIGEVESAKLIRDKVAGNPYHKNQSHSLGYGFVNYVNASD 120
Query: 144 AQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
A+ AI +NG L ++T+ V +A PS+ K N+
Sbjct: 121 AERAINTLNGLRLQSKTIKVSFA---RPSSDGIKDANL 155
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 82 GPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENF 141
G +RS + + + + D +Q +F EYG I + L DR TG +KG+ +++ +
Sbjct: 329 GDKRSAPSNTLFLGNLSFDCTNDSIQEIFAEYGNITRVSLPTDRDTGSIKGFGYVDFGSQ 388
Query: 142 EEAQNAITAMNGGELLTQTLTVDWA 166
EEA A+ A+NG ++ + + +D+A
Sbjct: 389 EEATAALDALNGQDIAGRNIRIDYA 413
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + ED L+ F +GEI + DR TG KG+ +E+ +A A M
Sbjct: 236 LFVGNLSWNIDEDWLRREFEGFGEIVGCRIITDRETGRGKGFGYVEFATSADAAKAQAEM 295
Query: 152 NGGELLTQTLTVDWA 166
+ EL + L VD++
Sbjct: 296 HQYELDGRPLNVDFS 310
>gi|428768452|ref|YP_007160242.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC 10605]
gi|428682731|gb|AFZ52198.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC 10605]
Length = 101
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E +DL VF EYG + +H+ DR TG ++G+A +E EN + ++AI A+
Sbjct: 3 IYVGNLPYEVTSEDLMEVFAEYGTVSRVHIPTDRETGRMRGFAFVEMENDNQEESAIDAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + + L V+ A
Sbjct: 63 DGAEWMKRELRVNKA 77
>gi|414887662|tpg|DAA63676.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 207
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 75 LGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYA 134
G G P P R + + +LV + DDL +F +YGEI ++++ DRRTG +G+A
Sbjct: 4 FGRSGPPPPIR--DTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFA 61
Query: 135 LIEYENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ Y+ +EAQ A+ ++G + + + V +A
Sbjct: 62 FVRYKYEDEAQKAVERLDGRLVDGREIMVQFA 93
>gi|198285433|gb|ACH85255.1| embryonic lethal abnormal vision like 1 [Salmo salar]
Length = 273
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 16/166 (9%)
Query: 19 EDGTADVDASSSPRAPQP-KLKSAITGGAPKKTK---------GRGF----REEADSERH 64
ED D++ P A +P +K A + K ++ GR F +A R
Sbjct: 107 EDAIKDLNGQKPPGASEPITVKFAASPNQAKNSQLINQLYHNQGRRFGGPVHHQAQRFRF 166
Query: 65 SRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLD 124
S ++ + + T G S GW I + + ++A E L +FG +G + N+ + D
Sbjct: 167 SPMSVDHMSGMSTVSAQG--NSTAGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRD 224
Query: 125 RRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
T KG+ + N+EEA AI ++NG + + L V + S G
Sbjct: 225 FNTNKCKGFGFVTMTNYEEAAMAIASLNGYRIGDKILQVSFKTSKG 270
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 38/62 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + + D++++F YG I N + +D+ +G +G A I ++ EA++AI +
Sbjct: 54 LYISGLPKTMTQKDVEDMFTRYGRIINSRVLVDQASGLSRGVAFIRFDKRAEAEDAIKDL 113
Query: 152 NG 153
NG
Sbjct: 114 NG 115
>gi|414079549|ref|YP_007000973.1| glycine-rich RNA-binding protein [Anabaena sp. 90]
gi|413972828|gb|AFW96916.1| glycine-rich RNA-binding protein [Anabaena sp. 90]
Length = 99
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + + E+DL+ VF EYG ++ L +DR TG V+G+ +E + E Q AI A+
Sbjct: 3 IYVGNLSYQVAEEDLKRVFAEYGTVKKAQLPIDRETGRVRGFGFVEMSSDAEEQAAIAAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + ++L V+ A
Sbjct: 63 DGSEWMGRSLKVNKA 77
>gi|448878208|gb|AGE46067.1| arginine/serine-rich splicing factor SC30 transcript VI [Zea mays]
Length = 270
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPG 184
+ +EAQ AI ++G ++ + + V +A GP+ P ++ ++ G
Sbjct: 65 KYADEAQKAIDRLDGRDVDGRNIMVQFA-KYGPNAEPIRKGRVKEG 109
>gi|402219166|gb|EJT99240.1| eukaryotic translation initiation factor 3 [Dacryopinax sp. DJM-731
SS1]
Length = 297
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 46/76 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+A+EDDL+++F +G + + + DR TG KGYA + +E+ + AQ A+ +
Sbjct: 214 LRVTNLSEDAEEDDLRDLFQRFGRVARVFIGRDRETGVGKGYAFVSFEDRDSAQRALDRV 273
Query: 152 NGGELLTQTLTVDWAF 167
+G L+V W+
Sbjct: 274 HGMGYANLILSVQWSV 289
>gi|313231584|emb|CBY08698.1| unnamed protein product [Oikopleura dioica]
Length = 278
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V+ + A +DD+Q +F ++G+I +HL DRRT +G+A I + + ++AQ AI M
Sbjct: 183 IRVSNLSPAATQDDVQTLFAKFGKIARIHLGRDRRTNESRGFAFINFHHRDDAQRAIDTM 242
Query: 152 NGGELLTQTLTVDWA 166
N L+V+W+
Sbjct: 243 NRYGYDNLILSVEWS 257
>gi|449450504|ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216322 [Cucumis sativus]
Length = 257
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F +YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ +EAQ AI ++G L + + V +A
Sbjct: 65 KYADEAQKAIDKLDGRMLDGREIMVQFA 92
>gi|425770690|gb|EKV09156.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum Pd1]
gi|425772037|gb|EKV10463.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum PHI26]
Length = 556
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 68 ADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT 127
A++N ++ + G Q + + V VH EDDL NVF +GE+ + L D T
Sbjct: 243 AEKNRQARNPEATAGNQHTAPFHRLYVGNVHFSITEDDLTNVFEPFGELEFVQLQKDE-T 301
Query: 128 GFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTV 163
G KGYA +++ N E+A++A+ MNG EL + + V
Sbjct: 302 GRSKGYAFVQFANPEQARDALEKMNGFELAGRAIRV 337
>gi|449528821|ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
Length = 251
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F +YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ +EAQ AI ++G L + + V +A
Sbjct: 65 KYADEAQKAIDKLDGRMLDGREIMVQFA 92
>gi|297603666|ref|NP_001054414.2| Os05g0105900 [Oryza sativa Japonica Group]
gi|52353606|gb|AAU44172.1| unknown protein [Oryza sativa Japonica Group]
gi|215686601|dbj|BAG88854.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675935|dbj|BAF16328.2| Os05g0105900 [Oryza sativa Japonica Group]
Length = 380
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%)
Query: 88 EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
E ++ V + ED L+ +F YGE+ N+ L++DR +GY +E++N +A+ A
Sbjct: 64 ESTVLHVDHLSRNVNEDHLKEIFENYGEVVNVELSMDRVVNLPRGYGYVEFKNRADAEKA 123
Query: 148 ITAMNGGELLTQTLTVDWAF 167
+ ++GG++ + V +A
Sbjct: 124 LLYLDGGQIDGNVVKVRFAL 143
>gi|168056189|ref|XP_001780104.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668507|gb|EDQ55113.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 288
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I VT + E+ +E DLQ +F +G I +++ DR TG +G+A I + N ++A AI +
Sbjct: 207 IRVTNLSEDTREQDLQELFSPFGSISRIYVAFDRETGLSRGFAFINFVNRDDAIRAINKL 266
Query: 152 NGGELLTQTLTVDWA 166
+G L V+WA
Sbjct: 267 DGYGYDNLILRVEWA 281
>gi|86608641|ref|YP_477403.1| RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557183|gb|ABD02140.1| putative RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 94
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + +A E+DL+ VF EYG ++ + L +DR TG +G+A +E EN + Q AI +
Sbjct: 3 IFVGNLSFKASEEDLRLVFAEYGTVKQIKLPVDRETGRKRGFAFVELENEADEQKAIDEL 62
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHR 188
+G + + L V+ A S G R GR+ R
Sbjct: 63 DGATWMGRDLRVNKALPRQTSAGG------RDGRSSR 93
>gi|390599914|gb|EIN09310.1| translation initiation factor eIF3g [Punctularia strigosozonata
HHB-11173 SS5]
Length = 296
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 80 GPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYE 139
GPG + + VT + E+ QE+DL+++FG +G + + + DR TG KG+A + +E
Sbjct: 204 GPGSGNRDDLPTLRVTNISEDTQENDLRDLFGRFGRVARVFVGRDRETGAGKGFAFVSFE 263
Query: 140 NFEEAQNAITAMNGGELLTQTLTVDWA 166
A+ A+ MNG L+V W+
Sbjct: 264 EKAVAERAMQKMNGFGYDNLILSVQWS 290
>gi|384483165|gb|EIE75345.1| hypothetical protein RO3G_00049 [Rhizopus delemar RA 99-880]
Length = 366
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 81 PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYEN 140
P ++ E + I G+ EA DD++ FGE GEI+++ + +D TG +G+ I++
Sbjct: 130 PKAAKTEENYTIWCGGISFEATADDVREFFGECGEIKDVRIRIDEATGKNRGFCHIDFAT 189
Query: 141 FEEAQNAITAMNGGELLTQTLTVDWA 166
+EA++A A++G E L + + +D A
Sbjct: 190 -QEAKDAAVALSGNEFLGRRIRIDGA 214
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 76 GTDGG-----PGPQRSIEGWII--LVTGVHEEAQEDDLQNVFGEYGEIR-NLHLNLDRRT 127
G DGG GP + + + L E+A L F E+G I ++ L +R +
Sbjct: 213 GADGGKKTNTSGPASATKKVFVANLNRDYDEDAHRTALTEAFQEFGTIVGDIRLPYNRES 272
Query: 128 GFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSN 169
G +KG IE+E E+A+ A+ MNG E+ + L D++ N
Sbjct: 273 GALKGIGYIEFETTEQAEAAVKGMNGVEINGRPLRTDFSGDN 314
>gi|218195935|gb|EEC78362.1| hypothetical protein OsI_18120 [Oryza sativa Indica Group]
Length = 284
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%)
Query: 88 EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
E ++ V + ED L+ +F YGE+ N+ L++DR +GY +E++N +A+ A
Sbjct: 67 ESTVLHVDHLSRNVNEDHLKEIFENYGEVVNVELSMDRVVNLPRGYGYVEFKNRADAEKA 126
Query: 148 ITAMNGGELLTQTLTVDWAF 167
+ ++GG++ + V +A
Sbjct: 127 LLYLDGGQIDGNVVKVRFAL 146
>gi|291232698|ref|XP_002736284.1| PREDICTED: Eukaryotic Initiation Factor family member
(eif-3.G)-like [Saccoglossus kowalevskii]
Length = 263
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
R EG I VT + E+ +E DLQ +F +G I ++L D+ TG KG+A I + E+A
Sbjct: 177 RRDEGATIRVTNLSEDTRESDLQELFRPFGTISRIYLAKDKVTGQSKGFAFINFHRREDA 236
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNG 170
AI ++G L V+WA +G
Sbjct: 237 ARAIQGVSGFGYDHLILNVEWAKPSG 262
>gi|254424963|ref|ZP_05038681.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
gi|196192452|gb|EDX87416.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
Length = 92
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + A+E+DL+ VFGEYG ++ + L DR TG +G+A +E E + AI A+
Sbjct: 3 IYVGNLSYSAKEEDLEGVFGEYGTVKRITLPTDRETGRPRGFAFVEMEEDATEEKAIEAL 62
Query: 152 NGGELLTQTLTVDWAFSNGPSTGP 175
+G E + + L V+ A P P
Sbjct: 63 DGAEWMGRELRVNKAKPREPRNRP 86
>gi|427784309|gb|JAA57606.1| Putative eukaryotic translation initiation factor 3 subunit g
[Rhipicephalus pulchellus]
Length = 285
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%)
Query: 88 EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
E I VT + E+ ++ DLQ++F +G+I ++L D+ TG KG+A I + + E+A A
Sbjct: 201 EAATIRVTNLSEDVRDSDLQDLFRPFGQIARIYLAKDKVTGQSKGFAFINFVHREDAARA 260
Query: 148 ITAMNGGELLTQTLTVDWAFSNG 170
I +NG L+V+WA +G
Sbjct: 261 IANVNGFGYDNLILSVEWAKPSG 283
>gi|158338654|ref|YP_001519831.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|359461822|ref|ZP_09250385.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
gi|158308895|gb|ABW30512.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 86
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + EA +DD+ VF EYG++ +HL +DR TG +G+ ++ EN E + AI +
Sbjct: 3 IYVGNLSYEASQDDVTAVFAEYGKVVKVHLPVDRETGRKRGFGFVDMENDSEEEAAIADL 62
Query: 152 NGGELLTQTLTVD 164
+G E + + L V+
Sbjct: 63 DGAEWMGRQLKVN 75
>gi|198437692|ref|XP_002131706.1| PREDICTED: similar to eukaryotic translation initiation factor 3,
subunit G [Ciona intestinalis]
Length = 284
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I VT + EE +E DLQ +F +G ++ ++L D+ T KG+A I + N ++A AI ++
Sbjct: 202 IRVTNLSEETKESDLQELFKPFGPLQRIYLAKDKHTQQSKGFAFINFYNRDDAAKAIKSV 261
Query: 152 NGGELLTQTLTVDWAFSNGPSTG 174
G L V+WA + PST
Sbjct: 262 CGFGYDHLILNVEWAKPSTPSTS 284
>gi|324512454|gb|ADY45159.1| ELAV-like protein 1 [Ascaris suum]
Length = 477
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 88 EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
GW I V + E ++ L +FG +G + ++ + D TG KGY + +E+A A
Sbjct: 386 SGWCIFVYNLAPETEDSILWQLFGPFGAVLSVKIIRDFATGKCKGYGFVTMGQYEDAVTA 445
Query: 148 ITAMNGGELLTQTLTVDWAFSN 169
ITA+NG +L +TL V + N
Sbjct: 446 ITALNGTQLGNRTLQVSFKAQN 467
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
SI+G + V+G+ + + +L+N+F YG+I + D TG KG + ++ EA+
Sbjct: 185 SIKGANLYVSGLPKSMSQPELENLFRPYGQIITSRILSDNITGLSKGVGFVRFDRKGEAE 244
Query: 146 NAITAMNGGELLTQTLTVDWAFSNGPS 172
AI+ +NG T V F+N P+
Sbjct: 245 VAISKLNGTIPAGCTEPVTVKFANNPA 271
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+++ + + +++++++F GEI + L D+ TG GY + Y E+A A++ +
Sbjct: 105 LIINYLPQTMSQEEVRSLFSSMGEIDSCKLVRDKITGQSLGYGFVNYVRQEDALKAVSTL 164
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L +T+ V +A PS+ K N+
Sbjct: 165 NGLRLQNKTIKVSFA---RPSSESIKGANL 191
>gi|448878326|gb|AGE46126.1| arginine/serine-rich splicing factor SC31 transcript IV [Sorghum
bicolor]
Length = 273
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPG 184
+ +EAQ AI ++G + + + V +A GP+ P ++ ++ G
Sbjct: 65 KYADEAQKAIDRLDGRNVDGRNIMVQFA-KYGPNAEPIQKGRVKEG 109
>gi|388857428|emb|CCF48936.1| related to TIF35-translation initiation factor eIF3 subunit
[Ustilago hordei]
Length = 310
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+A ++DL+ +FG +G + +++ DR TG KGYA + +E+ EEA A +
Sbjct: 229 LRVTNLSEDADDEDLRVLFGRFGRVVRVYVGRDRETGICKGYAFVSFEDREEADRARQRI 288
Query: 152 NGGELLTQTLTVDWAFSNG 170
+G L+ W+ G
Sbjct: 289 DGRGYDNLILSCQWSLPRG 307
>gi|346468719|gb|AEO34204.1| hypothetical protein [Amblyomma maculatum]
Length = 284
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%)
Query: 88 EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
E I VT + E+ ++ DLQ++F +G+I ++L D+ TG KG+A I + + E+A A
Sbjct: 200 EAATIRVTNLSEDVRDSDLQDLFRPFGQIARIYLAKDKVTGQSKGFAFINFVHREDAARA 259
Query: 148 ITAMNGGELLTQTLTVDWAFSNG 170
I +NG L+V+WA +G
Sbjct: 260 IANVNGFGYDNLILSVEWAKPSG 282
>gi|255581357|ref|XP_002531488.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528897|gb|EEF30895.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F +YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ +EAQ A+ ++G + + +TV +A
Sbjct: 65 KYADEAQKAVERLDGRVVDGREITVQFA 92
>gi|222629901|gb|EEE62033.1| hypothetical protein OsJ_16815 [Oryza sativa Japonica Group]
Length = 417
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%)
Query: 88 EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
E ++ V + ED L+ +F YGE+ N+ L++DR +GY +E++N +A+ A
Sbjct: 134 ESTVLHVDHLSRNVNEDHLKEIFENYGEVVNVELSMDRVVNLPRGYGYVEFKNRADAEKA 193
Query: 148 ITAMNGGELLTQTLTVDWAF 167
+ ++GG++ + V +A
Sbjct: 194 LLYLDGGQIDGNVVKVRFAL 213
>gi|448878320|gb|AGE46123.1| arginine/serine-rich splicing factor SC31 transcript I [Sorghum
bicolor]
Length = 268
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPG 184
+ +EAQ AI ++G + + + V +A GP+ P ++ ++ G
Sbjct: 65 KYADEAQKAIDRLDGRNVDGRNIMVQFA-KYGPNAEPIQKGRVKEG 109
>gi|115653212|ref|XP_791582.2| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-like [Strongylocentrotus purpuratus]
Length = 297
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
R E I VT + E+ +E DLQ++F +G I+ ++L D+ TG KG+A I + E A
Sbjct: 209 RRDEAATIRVTNLSEDTRESDLQDLFRPFGAIQRIYLAQDKITGHSKGFAFINFYLRESA 268
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNGPST 173
AI ++G L V+WA +G +T
Sbjct: 269 AKAIQCLSGFGYDHLILKVEWAKPSGHTT 297
>gi|302678229|ref|XP_003028797.1| hypothetical protein SCHCODRAFT_44661 [Schizophyllum commune H4-8]
gi|300102486|gb|EFI93894.1| hypothetical protein SCHCODRAFT_44661 [Schizophyllum commune H4-8]
Length = 252
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ QE+DL+ +FG +G + +++ DR TG KG+A + +E+ AQ A+ +
Sbjct: 174 LRVTNISEDTQENDLRELFGVFGRVARVYVGRDRETGQGKGFAFVSFEDRAIAQRAMEKV 233
Query: 152 NGGELLTQTLTVDWA 166
NG L+V W+
Sbjct: 234 NGKGYDNLILSVQWS 248
>gi|260828249|ref|XP_002609076.1| hypothetical protein BRAFLDRAFT_60256 [Branchiostoma floridae]
gi|229294430|gb|EEN65086.1| hypothetical protein BRAFLDRAFT_60256 [Branchiostoma floridae]
Length = 495
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V+ VH + DD+++VF +G+I++ L D TG KGY +EYE + AQ+AI +M
Sbjct: 169 IYVSSVHPDLAADDIKSVFEAFGKIKSCELAPDAVTGKHKGYGFLEYEKPQSAQDAIASM 228
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 229 NLFDLGGQYLRVGKAVT 245
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 38/65 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V ++ E +ED L+ F +G I+N+ L+ D T KGYA IEYE E AQ A+ M
Sbjct: 72 IYVGSIYYELREDTLKQAFSPFGPIKNIDLSWDPLTMKHKGYAFIEYEIPEAAQLALEQM 131
Query: 152 NGGEL 156
NG L
Sbjct: 132 NGVML 136
>gi|395545949|ref|XP_003774858.1| PREDICTED: uncharacterized protein LOC100927808 [Sarcophilus
harrisii]
Length = 442
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 64 HSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNL 123
HS LA R LG P P + V G+ E DL+ +F +YG I ++ +
Sbjct: 270 HSPLATRR-RHLGNRSNPDPN-----CCLGVFGLSLYTTERDLRQIFTKYGPISHVSIVY 323
Query: 124 DRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPST 173
D+++ +G+A + +EN EEA+ A ++G EL + + VD++ + P T
Sbjct: 324 DQQSRRSRGFAFVYFENVEEAKKAKERVDGIELDGRRIRVDFSITKRPHT 373
>gi|403167507|ref|XP_003327294.2| hypothetical protein PGTG_09843 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167061|gb|EFP82875.2| hypothetical protein PGTG_09843 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 260
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V+G+ A++ DL +F +YG ++ L D T V+G+ + E EEA A+TA+
Sbjct: 80 LHVSGISTRAEDADLYELFSKYGRVQKAQLMRDPNTKEVRGFGFVTMETCEEADAAMTAL 139
Query: 152 NGGELLTQTLTVDWA 166
NG +L + L V+ A
Sbjct: 140 NGADLFGKPLGVEKA 154
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%)
Query: 82 GPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENF 141
G +RS + + V E + +Q VF EYG I + L DR TG +KG+ +++ +
Sbjct: 311 GDKRSPPSNTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQ 370
Query: 142 EEAQNAITAMNGGELLTQTLTVDWA 166
+EA A+ A+NG ++ + + +D+A
Sbjct: 371 QEATAALEALNGQDIGGRAIRIDYA 395
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 103 EDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLT 162
ED L+ F +GEI + DR TG KG+ +E+ N +A A M+ EL + L
Sbjct: 230 EDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEFSNAADAAKAQKEMHEYELDGRQLN 289
Query: 163 VDWAFSNGPSTGPFKRKNMRPGRTHRSRSP 192
VD++ P P R + RSP
Sbjct: 290 VDFST---PRAKPDANGGARANKYGDKRSP 316
>gi|449551106|gb|EMD42070.1| hypothetical protein CERSUDRAFT_90674 [Ceriporiopsis subvermispora
B]
Length = 623
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%)
Query: 81 PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYEN 140
PG S G + V +H E D++ VF +GE+ + L+ D TG KGYA ++Y+
Sbjct: 388 PGVSASHGGMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKR 447
Query: 141 FEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
E+A+ A+ M G EL +TL V+ G
Sbjct: 448 SEDARMALEQMEGFELAGRTLRVNTVHEKG 477
>gi|332372985|gb|AEE61634.1| unknown [Dendroctonus ponderosae]
Length = 409
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++FGE G++ + L DR TG KGY EY + E A +A+ +
Sbjct: 16 VFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFCEYRDQETALSAMRNL 75
Query: 152 NGGELLTQTLTVDWAFS 168
NG E+ ++L VD A +
Sbjct: 76 NGYEIGGRSLRVDNACT 92
>gi|448878314|gb|AGE46120.1| arginine/serine-rich splicing factor SC30 transcript I [Sorghum
bicolor]
Length = 250
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 80 GPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYE 139
GP P R + + +LV + DDL +F +YGEI ++++ DRRTG +G+A + Y+
Sbjct: 8 GPPPIR--DTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYK 65
Query: 140 NFEEAQNAITAMNGGELLTQTLTVDWA 166
+EAQ A+ ++G + + + V +A
Sbjct: 66 YEDEAQKAVDRLDGRLVDGREIMVQFA 92
>gi|296422908|ref|XP_002841000.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637228|emb|CAZ85191.1| unnamed protein product [Tuber melanosporum]
Length = 332
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
G + VTG+H EDD+ +F +YGE+ + LD T +G+ ++ ++A +A
Sbjct: 93 GTNLFVTGIHPRLTEDDVTRLFAKYGEVEKCQIMLDPHTKESRGFGFVKLATLDQADSAK 152
Query: 149 TAMNGGELLTQTLTVDWAFSNGPST-------GPFKRKNMRPG 184
+ G +TL+++ A + P T GP KR + R G
Sbjct: 153 EHLQGEVFEGRTLSIEKARRSRPRTPTPGKYFGPPKRDDYRRG 195
>gi|390438650|ref|ZP_10227098.1| putative RNA-binding protein rbpF [Microcystis sp. T1-4]
gi|389837939|emb|CCI31222.1| putative RNA-binding protein rbpF [Microcystis sp. T1-4]
Length = 97
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E ++DL +VF EYG ++ +H+ +DR TG +G+A +E EN + AI A+
Sbjct: 3 IFVGNLSYEISQEDLTDVFAEYGTVQRVHIPVDRETGRKRGFAFVEMENKAQETAAIEAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G + + +++ V+ A
Sbjct: 63 DGADWMGRSIKVNEA 77
>gi|157129340|ref|XP_001655377.1| RNA-binding protein, putative [Aedes aegypti]
gi|108882112|gb|EAT46337.1| AAEL002461-PA [Aedes aegypti]
Length = 138
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V G+ E E DL VF +YGEI N++L D++TG KG++ I +E+ + M
Sbjct: 36 IFVGGLPSELTEGDLLAVFSQYGEIVNINLVRDKKTGKSKGFSFICFEDQRSTVLTVDNM 95
Query: 152 NGGELLTQTLTVD 164
NG +LL +TL VD
Sbjct: 96 NGIKLLGRTLRVD 108
>gi|170090564|ref|XP_001876504.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647997|gb|EDR12240.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 116
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%)
Query: 75 LGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYA 134
LG G + + V G+H + E D+ +F +YGE+ +LH+ D+ TG KG+
Sbjct: 18 LGLSGASWHDEYKDSAYVFVGGLHFDLTEGDVITIFSQYGEVMDLHMPRDKDTGKTKGFG 77
Query: 135 LIEYENFEEAQNAITAMNGGELLTQTLTVD 164
+ YE+ A+ +NG ++L +TL VD
Sbjct: 78 FLMYEDQRSTVLAVDNLNGAKVLERTLRVD 107
>gi|134025329|gb|AAI35084.1| LOC562370 protein [Danio rerio]
Length = 379
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH + +DD+++VF +G I++ L D TG KGY IEY+ + AQ+A+++M
Sbjct: 191 IYVASVHPDLSDDDIKSVFEAFGRIKSCSLARDPTTGKHKGYGFIEYDKAQSAQDAVSSM 250
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 251 NLFDLGGQYLRVGKAVT 267
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 94 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTLKHKGFAFVEYEVPEAAQLALEQM 153
Query: 152 NGGEL 156
N L
Sbjct: 154 NSVML 158
>gi|426227971|ref|XP_004008088.1| PREDICTED: RNA-binding protein 28 isoform 1 [Ovis aries]
Length = 749
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + EDDL+ VF ++G I L +N+ R+ G ++G+A ++++N EA A+
Sbjct: 116 LIIRNLSFKCSEDDLKTVFSQFGTI--LEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKG 173
Query: 151 MNGGELLTQTLTVDWAFSN 169
MN E+ +T+ VDWA +
Sbjct: 174 MNMKEIKGRTVAVDWAVAK 192
>gi|443328827|ref|ZP_21057420.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
gi|442791563|gb|ELS01057.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
Length = 95
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I + + E ++DL VF EYG ++ +H+ DR TG V+G+A +E E+ + AI A+
Sbjct: 3 IYIGNLSYEVNQEDLNEVFTEYGTVKRVHVPTDRETGRVRGFAFVEMESEADEDKAIAAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + + L V+ A
Sbjct: 63 DGAEWMDRELKVNKA 77
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%)
Query: 103 EDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLT 162
ED + FG++G+++++ L DR TG KG+ +++ + E+A A+ AMNG E+ + +
Sbjct: 307 EDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVEDASAALKAMNGAEIAGRAIR 366
Query: 163 VDWA 166
VD+A
Sbjct: 367 VDFA 370
>gi|348501352|ref|XP_003438234.1| PREDICTED: cold-inducible RNA-binding protein A-like [Oreochromis
niloticus]
Length = 183
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ + G+ E ED L FG+YG I + + D+ TG +G+ ++Y+N E+A++A+ AM
Sbjct: 7 LFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDAM 66
Query: 152 NGGELLTQTLTVDWA 166
NG L + + VD A
Sbjct: 67 NGKTLDGRAIRVDEA 81
>gi|441628930|ref|XP_003275701.2| PREDICTED: ELAV-like protein 3 [Nomascus leucogenys]
Length = 364
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+ +++FG G+I + L D+ TG GY + Y + +A AI +
Sbjct: 157 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 216
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG +L T+T+ V +FSN P++ + N+
Sbjct: 217 NGLKLQTKTIKVGASFSNPPNSTTLELDNL 246
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%)
Query: 90 WIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAIT 149
W I V + EA E L +FG +G + N+ + D T KG+ + N++EA AI
Sbjct: 281 WCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIA 340
Query: 150 AMNGGELLTQTLTVDWAFS 168
++NG L + L V + S
Sbjct: 341 SLNGYRLGERVLQVSFKTS 359
>gi|423347235|ref|ZP_17324922.1| hypothetical protein HMPREF1060_02594 [Parabacteroides merdae
CL03T12C32]
gi|409218492|gb|EKN11463.1| hypothetical protein HMPREF1060_02594 [Parabacteroides merdae
CL03T12C32]
Length = 101
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I +TG++ + DL ++F EYGEI + + +DR TG +G+ +E N + Q AI A+
Sbjct: 3 IYITGLNYSINDADLNDLFAEYGEITSAKVIMDRETGRSRGFGFVEMVNDGDGQKAIDAL 62
Query: 152 NGGELLTQTLTVDWA--FSNGPSTGPFKRK 179
NG E + ++V A S PS G +R+
Sbjct: 63 NGAEFEKKVISVSVARPRSEKPSGGYRERR 92
>gi|296488280|tpg|DAA30393.1| TPA: RNA binding motif protein 28 isoform 1 [Bos taurus]
Length = 751
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + EDDL+ VF ++G I L +N+ R+ G ++G+A ++++N EA A+
Sbjct: 116 LIIRNLSFKCSEDDLKTVFSQFGTI--LEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKG 173
Query: 151 MNGGELLTQTLTVDWAFSN 169
MN E+ +T+ VDWA +
Sbjct: 174 MNMKEIKGRTVAVDWAVAK 192
>gi|367034339|ref|XP_003666452.1| hypothetical protein MYCTH_2084160, partial [Myceliophthora
thermophila ATCC 42464]
gi|347013724|gb|AEO61207.1| hypothetical protein MYCTH_2084160, partial [Myceliophthora
thermophila ATCC 42464]
Length = 255
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I+V + + ED L +FGEYGEI +L L ++R++G +G A I Y N +AQ AIT M
Sbjct: 115 IVVERLTKNVNEDHLCEIFGEYGEIDDLDLPVNRQSGLNRGTAYILYFNEADAQAAITHM 174
Query: 152 NGGELLTQTLTV 163
+ +L T+ V
Sbjct: 175 HEAQLDGSTIHV 186
>gi|242019535|ref|XP_002430216.1| eukaryotic translation initiation factor 3 subunit, putative
[Pediculus humanus corporis]
gi|212515312|gb|EEB17478.1| eukaryotic translation initiation factor 3 subunit, putative
[Pediculus humanus corporis]
Length = 288
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I ++ + E QE DL+++ +G ++ + L D++T KG+A I ++N E+A +AI +
Sbjct: 204 IRISNLSESTQESDLEDLIKYFGPVQKIFLAKDKQTQLCKGFAYIHFKNKEDAASAIKGL 263
Query: 152 NGGELLTQTLTVDWAFS 168
NG L VDW+ S
Sbjct: 264 NGHGYDHLILNVDWSTS 280
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%)
Query: 84 QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEE 143
QRS + + + + EDD+ N F E+GE+ + L D +G KG+ +E+ E
Sbjct: 306 QRSAPSSTLFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQES 365
Query: 144 AQNAITAMNGGELLTQTLTVDWA 166
AQ AI AM G EL + L +D++
Sbjct: 366 AQAAIDAMTGQELAGRPLRLDFS 388
>gi|115476996|ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|42408182|dbj|BAD09319.1| putative splicing factor, arginine/serine-rich [Oryza sativa
Japonica Group]
gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|215693774|dbj|BAG88973.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737273|dbj|BAG96202.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 289
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDIRDTFSLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKR 178
+ EEAQ AI ++G + + + V +A GP+ P ++
Sbjct: 65 KYAEEAQKAIDRLDGRNVDGRNIMVQFA-KYGPNAEPIRK 103
>gi|328856954|gb|EGG06073.1| hypothetical protein MELLADRAFT_48578 [Melampsora larici-populina
98AG31]
Length = 300
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 94 VTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNG 153
VT + E+ QE+DL ++F +G+I +++ D+ TG KG+A + +E+ EA+ A+ +NG
Sbjct: 219 VTNLSEDVQENDLWDLFARFGKISRIYVGKDQETGLCKGFAFVSFEDRLEAERAMKKING 278
Query: 154 GELLTQTLTVDWAFSNG 170
L W+ G
Sbjct: 279 LPYDHLILGCMWSLPRG 295
>gi|226510663|gb|ACO59906.1| eukaryotic translation initiation factor 3 subunit G [Penaeus
monodon]
Length = 292
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E +E DLQ++F +G+I + L D+ TG KG+A I ++ E+A AI +
Sbjct: 212 VRVTNLSENTREQDLQDLFRPFGDISRIFLAKDKNTGQSKGFAFINFKRREDAAKAIQVL 271
Query: 152 NGGELLTQTLTVDWAFSNG 170
NG L+V+WA +G
Sbjct: 272 NGYGYDHLILSVEWAKPSG 290
>gi|427738521|ref|YP_007058065.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
gi|427373562|gb|AFY57518.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
Length = 91
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E E++L+ +F EYGE+++++L +DR G ++G+A +E N E+ AI ++
Sbjct: 3 IYVGNLSYEVVEEELKQIFLEYGEVKSIYLPMDRDAGRIRGFAFVEMGNDEQETTAIESL 62
Query: 152 NGGELLTQTLTVD 164
+G E + ++L V+
Sbjct: 63 DGAEWMGRSLRVN 75
>gi|393788074|ref|ZP_10376205.1| hypothetical protein HMPREF1068_02485 [Bacteroides nordii
CL02T12C05]
gi|392656287|gb|EIY49926.1| hypothetical protein HMPREF1068_02485 [Bacteroides nordii
CL02T12C05]
Length = 97
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I ++G+ A + DL N+F EYGE+ + + LDR TG +G+A +E N E Q AI +
Sbjct: 3 IYISGLSFSANDADLNNLFAEYGEVSSAKVILDRETGKSRGFAFVEMTNDTEGQKAIDEL 62
Query: 152 NGGELLTQTLTVDWA 166
NG E + + V A
Sbjct: 63 NGVEYDQKVIAVSIA 77
>gi|270000744|gb|EEZ97191.1| hypothetical protein TcasGA2_TC004378 [Tribolium castaneum]
Length = 409
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++FGE G++ + L DR TG KGY EY + E A +A+ +
Sbjct: 16 VFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFCEYRDQETALSAMRNL 75
Query: 152 NGGELLTQTLTVDWAFS 168
NG E+ + L VD A +
Sbjct: 76 NGYEIGGRNLRVDNACT 92
>gi|448878322|gb|AGE46124.1| arginine/serine-rich splicing factor SC31 transcript II [Sorghum
bicolor]
Length = 180
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPG 184
+ +EAQ AI ++G + + + V +A GP+ P ++ ++ G
Sbjct: 65 KYADEAQKAIDRLDGRNVDGRNIMVQFA-KYGPNAEPIQKGRVKEG 109
>gi|168026218|ref|XP_001765629.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683055|gb|EDQ69468.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 288
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I VT + E+ +E DLQ +F +G I +++ DR TG +G+A I + N ++A AI +
Sbjct: 207 IRVTNLSEDTREQDLQELFRPFGNISRIYVAFDRETGLSRGFAFINFVNRDDAIRAINKL 266
Query: 152 NGGELLTQTLTVDWA 166
+G L V+WA
Sbjct: 267 DGYGYDNLILRVEWA 281
>gi|270013801|gb|EFA10249.1| hypothetical protein TcasGA2_TC012449 [Tribolium castaneum]
Length = 281
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I +T + E E DL+++ +G I+ L+L D++ G+ KG+A I ++ +A AI+ +
Sbjct: 202 IRITNLSESTTETDLEDLVKPFGPIQKLYLAKDKQAGYCKGFAYIHFKFKNDAAKAISML 261
Query: 152 NGGELLTQTLTVDWA 166
NG LTVDW+
Sbjct: 262 NGHGYDHLILTVDWS 276
>gi|443323178|ref|ZP_21052187.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
gi|442787088|gb|ELR96812.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
Length = 95
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V ++ + + DL +VF EYG ++ +H+ DR TG +G+A +E E E AITA+
Sbjct: 3 IYVGNLNYKVTDSDLNDVFAEYGTVKRVHIPTDRDTGRARGFAFVEMETEAEEDAAITAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + + + V+ A
Sbjct: 63 DGAEWMDREIKVNKA 77
>gi|47210814|emb|CAF92867.1| unnamed protein product [Tetraodon nigroviridis]
Length = 447
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 66 RLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDR 125
R + + + + + G G S GW I + + +EA E L +FG +G + N+ + D
Sbjct: 343 RFSPMSVDHVSSGGASG--NSPNGWCIFIYNLGQEADEAILWQLFGPFGAVVNVKVIRDF 400
Query: 126 RTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
T KG+ + N+EEA AI ++NG L + L V + S G
Sbjct: 401 NTSKCKGFGFVTMSNYEEAAMAIHSLNGYRLGDKVLQVSFKTSKG 445
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ A + DL+++F YG I N + +D+ +G +G A I ++ EA++AI +
Sbjct: 226 LYISGLPRTASQQDLEDMFSHYGRIINSRVLVDQASGVSRGVAFIRFDKRSEAEDAIKHL 285
Query: 152 NG 153
NG
Sbjct: 286 NG 287
>gi|357148211|ref|XP_003574673.1| PREDICTED: uncharacterized protein LOC100824108 [Brachypodium
distachyon]
Length = 283
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 82 GPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENF 141
GP + + +LV + DDL +F YG++ ++ + DRRTG +G+A + Y+
Sbjct: 8 GPPDIRDTFSLLVLNISFRTTADDLYPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
Query: 142 EEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKR 178
+EAQ A+ ++G + + + V +A GP+ P ++
Sbjct: 68 DEAQKAVDRLDGRNVDGRNIMVQFA-KYGPNAEPIRK 103
>gi|238011430|gb|ACR36750.1| unknown [Zea mays]
gi|414590933|tpg|DAA41504.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590934|tpg|DAA41505.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 190
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 75 LGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYA 134
G G P P R + + +LV + DDL +F +YGEI ++++ DRRTG +G+A
Sbjct: 4 FGRSGPPPPIR--DTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFA 61
Query: 135 LIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPS 172
+ Y+ +EAQ A+ ++G + + + V +A GP+
Sbjct: 62 FVRYKYEDEAQKAVDRLDGRLVDGREIMVQFA-KYGPN 98
>gi|395334381|gb|EJF66757.1| splicing factor CC1-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 624
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
G + V +H E D++ VF +GE+ + L+ D TG KGYA ++Y+ E+A+ A+
Sbjct: 397 GMQLYVGSLHFNLSESDIKQVFEPFGELEFVDLHRDPVTGRSKGYAFVQYKRAEDAKMAL 456
Query: 149 TAMNGGELLTQTLTVDWAFSNG 170
M+G EL +TL V+ G
Sbjct: 457 EQMDGFELAGRTLRVNTVHEKG 478
>gi|357121974|ref|XP_003562691.1| PREDICTED: uncharacterized protein LOC100826320 [Brachypodium
distachyon]
Length = 238
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
GP P R + + +LV + DDL +F +YGE+ ++++ DRRTG +G+A + Y
Sbjct: 7 SGPPPIR--DTYSLLVLNITFRTTADDLFPLFDKYGEVVDIYIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ +EAQ A+ ++G + + + V +A
Sbjct: 65 KYEDEAQKAVDRLDGRLVDGREMMVQFA 92
>gi|67923265|ref|ZP_00516750.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|67854891|gb|EAM50165.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
Length = 94
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 49/75 (65%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + + ++DL+ VF EYG ++ +H+ DR +G ++G+A +E ++ ++ Q AI+ +
Sbjct: 3 IYVGNLSYDVNKEDLEEVFTEYGSVKRVHIPKDRESGRMRGFAFVEMDSDDQEQEAISTL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + +TL V+ A
Sbjct: 63 DGAEWMGRTLKVNKA 77
>gi|449478880|ref|XP_004155443.1| PREDICTED: uncharacterized protein LOC101223695 [Cucumis sativus]
Length = 283
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F +YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ +EAQ A+ ++G + + +TV +A
Sbjct: 65 KYADEAQKAVERLDGTMVDGREITVQFA 92
>gi|448878328|gb|AGE46127.1| arginine/serine-rich splicing factor SC31 transcript V [Sorghum
bicolor]
Length = 185
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPG 184
+ +EAQ AI ++G + + + V +A GP+ P ++ ++ G
Sbjct: 65 KYADEAQKAIDRLDGRNVDGRNIMVQFA-KYGPNAEPIQKGRVKEG 109
>gi|149706198|ref|XP_001502696.1| PREDICTED: RNA-binding protein 28 isoform 1 [Equus caballus]
Length = 768
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + EDDL+ +F ++G + L +N+ R+ G ++G+A ++++N EA A+ +
Sbjct: 116 LIIRNLSFKCSEDDLKTIFAQFGAV--LEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKS 173
Query: 151 MNGGELLTQTLTVDWAFSN 169
MN E+ +T+ VDWA +
Sbjct: 174 MNMKEIKGRTVAVDWAVAK 192
>gi|335308866|ref|XP_003361402.1| PREDICTED: RNA-binding protein 28-like, partial [Sus scrofa]
Length = 365
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + EDDL+ VF +G + L +N+ R+ G ++G+A ++++N EA A+ +
Sbjct: 169 LIIRNLSFKCSEDDLKTVFAPFGAV--LEVNIPRKPDGKMRGFAFVQFKNLLEAGKALRS 226
Query: 151 MNGGELLTQTLTVDWAFSN------GPSTGPFKRKNMRPG 184
MN E+ +T+ VDWA + P++ P + K RPG
Sbjct: 227 MNMKEIKGRTVAVDWAVAKDKYKNTQPASAPGEEK--RPG 264
>gi|440907745|gb|ELR57852.1| RNA-binding protein 28 [Bos grunniens mutus]
Length = 751
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + EDDL+ VF ++G I L +N+ R+ G ++G+A ++++N EA A+
Sbjct: 116 LIIRNLSFKCSEDDLKTVFSQFGTI--LEVNIPRKPDGKMRGFAFVQFKNLLEAGKALRG 173
Query: 151 MNGGELLTQTLTVDWAFSN 169
MN E+ +T+ VDWA +
Sbjct: 174 MNMKEIKGRTVAVDWAVAK 192
>gi|307152307|ref|YP_003887691.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306982535|gb|ADN14416.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 116
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + + +DD++ VFGEYG ++ + L +DR +G V+G+A ++ ++ E AI A+
Sbjct: 3 IYVGNLPYQVTQDDIKEVFGEYGTVKQVKLPIDRESGRVRGFAFVDLDSDAEETKAIEAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + + L V A
Sbjct: 63 DGAEWMGRELKVSKA 77
>gi|195586507|ref|XP_002083015.1| GD24928 [Drosophila simulans]
gi|194195024|gb|EDX08600.1| GD24928 [Drosophila simulans]
Length = 652
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + ++ ED L+ FG++G + ++H+ L R G + G A ++YE +A AI
Sbjct: 45 LIVRNISYKSTEDSLREHFGQWGTLEDVHI-LKRGDGKLVGCAFVQYETINQATKAILNS 103
Query: 152 NGGELLTQTLTVDWAF 167
NG ELL + + VDWA
Sbjct: 104 NGKELLGRKVFVDWAL 119
>gi|350401751|ref|XP_003486249.1| PREDICTED: cleavage stimulation factor subunit 2-like [Bombus
impatiens]
Length = 441
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E++L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 152 NGGELLTQTLTVDWAFS 168
NG E+ +TL VD A +
Sbjct: 79 NGYEIGGRTLRVDNACT 95
>gi|195353236|ref|XP_002043111.1| GM11803 [Drosophila sechellia]
gi|194127199|gb|EDW49242.1| GM11803 [Drosophila sechellia]
Length = 652
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + ++ ED L+ FG++G + ++H+ L R G + G A ++YE +A AI
Sbjct: 45 LIVRNISYKSTEDSLREHFGQWGTLEDVHI-LKRGDGKLVGCAFVQYETINQATKAILNS 103
Query: 152 NGGELLTQTLTVDWAF 167
NG ELL + + VDWA
Sbjct: 104 NGKELLGRKVFVDWAL 119
>gi|425459045|ref|ZP_18838531.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
gi|389823285|emb|CCI28615.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
Length = 97
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 48/75 (64%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E EDDL +VF +YG ++ +++ +DR TG +G+A ++ EN ++ AI A+
Sbjct: 3 IFVGNLSYEISEDDLTDVFKDYGIVQRVYIPVDRDTGRKRGFAFVQMENKDQETKAIAAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + +++ V+ A
Sbjct: 63 DGAEWMGRSIKVNEA 77
>gi|291400895|ref|XP_002716702.1| PREDICTED: RNA binding motif protein, X-linked 2 [Oryctolagus
cuniculus]
Length = 198
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V G+ E E D+ VF +YGEI N+HL D++TG +G+ I YE+ A+
Sbjct: 37 VFVGGLPYELTEGDILCVFSQYGEIVNIHLVRDKKTGKSRGFGFICYEDQRSTVLAVDNF 96
Query: 152 NGGELLTQTLTVDWAFSNGP 171
NG ++ +T+ VD A + P
Sbjct: 97 NGIKIKGRTIRVDHASNYRP 116
>gi|198418855|ref|XP_002123179.1| PREDICTED: similar to cleavage stimulation factor, 3 pre-RNA,
subunit 2, 64kDa [Ciona intestinalis]
Length = 455
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 84 QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEE 143
+RSI + V + EA E+ L+++F E G + + L DR +G KGY EY++ E
Sbjct: 12 ERSIRS--VFVGNIPYEATEEQLKDIFNEVGNVISFRLVFDRESGKPKGYGFAEYQDKET 69
Query: 144 AQNAITAMNGGELLTQTLTVDWAFS 168
A +++ +NG EL + L VD A S
Sbjct: 70 ALSSMRNLNGRELHGRPLRVDHATS 94
>gi|324520554|gb|ADY47664.1| Serine/arginine-rich splicing factor 12 [Ascaris suum]
Length = 183
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
R+ EG + V VH A+ +DL+ +F G +R++++ LD T +G+A ++YE +A
Sbjct: 9 RADEGTTLYVRQVHYAARPEDLRTLFERMGPVRDVYIPLDYYTHESRGFAYVKYEYVGDA 68
Query: 145 QNAITAMNGGELLTQTLTVDWA 166
+ A ++G +L + + +DWA
Sbjct: 69 ERAYKQLHGCAILGRRIAIDWA 90
>gi|194886641|ref|XP_001976654.1| GG19902 [Drosophila erecta]
gi|190659841|gb|EDV57054.1| GG19902 [Drosophila erecta]
Length = 655
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + ++ ED L+ FG++G + ++H+ L R G + G A ++YE +A AI
Sbjct: 48 LIVRNISYKSTEDSLREHFGQWGTLEDVHI-LKRGDGKLVGCAFVQYETINQATKAILNS 106
Query: 152 NGGELLTQTLTVDWAF 167
NG ELL + + VDWA
Sbjct: 107 NGKELLGRKVFVDWAL 122
>gi|170060753|ref|XP_001865940.1| RNA-binding motif protein [Culex quinquefasciatus]
gi|167879121|gb|EDS42504.1| RNA-binding motif protein [Culex quinquefasciatus]
Length = 137
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V G+ E E DL VF +YGEI N++L DR+TG KG+ I +E+ + +
Sbjct: 36 IFVGGLPSELTEGDLLAVFSQYGEIVNINLVRDRKTGKSKGFGFICFEDQRSTVLTVDNL 95
Query: 152 NGGELLTQTLTVD 164
NG +LL +TL VD
Sbjct: 96 NGIKLLGRTLRVD 108
>gi|126323028|ref|XP_001370705.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Monodelphis
domestica]
Length = 637
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 306 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 365
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 366 NLFDLGGQYLRVGKAVT 382
Score = 42.0 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 209 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 268
Query: 152 N 152
N
Sbjct: 269 N 269
>gi|24762707|ref|NP_611955.2| CG4806 [Drosophila melanogaster]
gi|21626772|gb|AAF47253.2| CG4806 [Drosophila melanogaster]
gi|73853366|gb|AAZ86754.1| LD27920p [Drosophila melanogaster]
Length = 657
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + ++ ED L+ FG++G + ++H+ L R G + G A ++YE +A AI
Sbjct: 50 LIVRNISYKSTEDSLREHFGQWGTLEDVHI-LKRGDGKLVGCAFVQYETINQATKAILNS 108
Query: 152 NGGELLTQTLTVDWAF 167
NG ELL + + VDWA
Sbjct: 109 NGKELLGRKVFVDWAL 124
>gi|307172466|gb|EFN63915.1| Cleavage stimulation factor 64 kDa subunit [Camponotus floridanus]
Length = 438
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E++L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 152 NGGELLTQTLTVDWAFS 168
NG E+ +TL VD A +
Sbjct: 79 NGYEIGGRTLRVDNACT 95
>gi|449438193|ref|XP_004136874.1| PREDICTED: uncharacterized protein LOC101219227 [Cucumis sativus]
Length = 283
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F +YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ +EAQ A+ ++G + + +TV +A
Sbjct: 65 KYADEAQKAVERLDGTMVDGREITVQFA 92
>gi|218437654|ref|YP_002375983.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
gi|218170382|gb|ACK69115.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
Length = 110
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + + +DD++ VFGEYG ++ + L +DR +G V+G+A ++ + ++ +AI A+
Sbjct: 3 IYVGNIPYQVTQDDIKEVFGEYGTVKQVKLPVDRESGRVRGFAFVDLDTEDQENSAIEAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + + L V A
Sbjct: 63 DGAEWMGRELKVSKA 77
>gi|50552081|ref|XP_503515.1| YALI0E03828p [Yarrowia lipolytica]
gi|74689524|sp|Q6C747.1|EIF3G_YARLI RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|49649384|emb|CAG79094.1| YALI0E03828p [Yarrowia lipolytica CLIB122]
Length = 294
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + EEA +DDL+ +FG+YG I +++ DR TG +G+A + Y AQ A+ AM
Sbjct: 216 LRVTNLSEEATDDDLRRMFGKYGMINRVYVAKDRDTGRPRGFAFVTYTLKSHAQAALEAM 275
Query: 152 NGGELLTQTLTVDWA 166
+G + VD++
Sbjct: 276 DGHGFDNLIMKVDYS 290
>gi|307202383|gb|EFN81811.1| Cleavage stimulation factor 64 kDa subunit [Harpegnathos saltator]
Length = 439
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E++L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 152 NGGELLTQTLTVDWAFS 168
NG E+ +TL VD A +
Sbjct: 79 NGYEIGGRTLRVDNACT 95
>gi|448878419|gb|AGE46172.1| arginine/serine-rich splicing factor SC37 transcript III
[Physcomitrella patens subsp. patens]
Length = 257
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKR-----KNMRPGRTHRSRSPR 193
+ +EAQ AI ++G E+ + + V +A G P +R M+ SRSP+
Sbjct: 65 KYADEAQKAIERLDGREVDGRHIVVQFA-KYGRKDEPIQRGRITDTGMKRVSRSASRSPK 123
Query: 194 R 194
R
Sbjct: 124 R 124
>gi|428203936|ref|YP_007082525.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427981368|gb|AFY78968.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 97
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E + DL +VF EYG ++ +H+ DR TG ++G+A +E E E +AI A+
Sbjct: 3 IFVGNLSYEVTQADLNSVFAEYGSVKRVHIPTDRETGRMRGFAFVEMETAAEETSAIEAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + + V+ A
Sbjct: 63 DGAEWYGREMKVNQA 77
>gi|255941952|ref|XP_002561745.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586368|emb|CAP94118.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 562
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 68 ADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT 127
A++N ++ T+ G + + V VH E+DL NVF +GE+ + L D T
Sbjct: 250 AEKNRQARNTESTSGHHHTAPFHRLYVGNVHFSITEEDLTNVFEPFGELEFVQLQKDE-T 308
Query: 128 GFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTV 163
G KGYA +++ N E+A++A+ MNG EL + + V
Sbjct: 309 GRSKGYAFVQFANPEQARDALEKMNGFELAGRAIRV 344
>gi|202028117|gb|ACH95270.1| FI03862p [Drosophila melanogaster]
Length = 660
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + ++ ED L+ FG++G + ++H+ L R G + G A ++YE +A AI
Sbjct: 53 LIVRNISYKSTEDSLREHFGQWGTLEDVHI-LKRGDGKLVGCAFVQYETINQATKAILNS 111
Query: 152 NGGELLTQTLTVDWAF 167
NG ELL + + VDWA
Sbjct: 112 NGKELLGRKVFVDWAL 127
>gi|156398787|ref|XP_001638369.1| predicted protein [Nematostella vectensis]
gi|156225489|gb|EDO46306.1| predicted protein [Nematostella vectensis]
Length = 504
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I + VH + EDD+++VF +G++ + L+ + TG KGY IEYEN + A +AI +M
Sbjct: 163 IYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIASM 222
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNMRP 183
N +L Q L V A + P++ N P
Sbjct: 223 NLFDLGGQFLRVGRAITP-PTSSAMAAINTTP 253
Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E +E+ ++ F +G I + L+ D KG+A +EY+ E AQ A+ M
Sbjct: 66 VYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQM 125
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPF 176
NG L + + V SN P P
Sbjct: 126 NGVLLGGRNIKVGRP-SNVPQAAPL 149
>gi|170083917|ref|XP_001873182.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650734|gb|EDR14974.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 448
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
G I+ V +H E D++ VF +GE+ + L+ D TG KGYA ++Y+ E+A+ A+
Sbjct: 221 GAILYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRSEDARMAL 280
Query: 149 TAMNGGELLTQTLTVDWAFSNG 170
M G EL +TL V+ G
Sbjct: 281 EQMEGFELAGRTLRVNTVHEKG 302
>gi|242035637|ref|XP_002465213.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor]
gi|241919067|gb|EER92211.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor]
gi|448878340|gb|AGE46133.1| arginine/serine-rich splicing factor SCL25A transcript I [Sorghum
bicolor]
gi|448878342|gb|AGE46134.1| arginine/serine-rich splicing factor SCL25A transcript II [Sorghum
bicolor]
Length = 213
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+LV + + + DDL+ FG++G +++++L D T KG+ I+Y + E+A +A M
Sbjct: 39 LLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPKDYYTREPKGFGFIQYFDPEDASDAKYHM 98
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTH------RSRSP 192
+G LL + +TV +A N + + GR+ RSRSP
Sbjct: 99 DGQMLLGREITVVFAEENRKKPSDMRARERMSGRSRSYDRRLRSRSP 145
>gi|189203851|ref|XP_001938261.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985360|gb|EDU50848.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 475
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%)
Query: 82 GPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENF 141
G +RS + + V E + +Q VF EYG I + L DR TG +KG+ +++ +
Sbjct: 315 GDKRSPPSNTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQ 374
Query: 142 EEAQNAITAMNGGELLTQTLTVDWA 166
+EA A+ A+NG ++ + + +D+A
Sbjct: 375 QEATAALEALNGQDIGGRAIRIDYA 399
>gi|157743332|ref|NP_001099058.1| poly(U)-binding-splicing factor PUF60 [Danio rerio]
gi|157423233|gb|AAI53302.1| LOC562370 protein [Danio rerio]
Length = 518
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH + +DD+++VF +G I++ L D TG KGY IEY+ + AQ+A+++M
Sbjct: 191 IYVASVHPDLSDDDIKSVFEAFGRIKSCSLARDPTTGKHKGYGFIEYDKAQSAQDAVSSM 250
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 251 NLFDLGGQYLRVGKAVT 267
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 94 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTLKHKGFAFVEYEVPEAAQLALEQM 153
Query: 152 NGGEL 156
N L
Sbjct: 154 NSVML 158
>gi|393906773|gb|EFO27553.2| hypothetical protein LOAG_00933 [Loa loa]
Length = 344
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G G R E + V VH A+ DDL+ +F G +R++++ LD T +G+A +++
Sbjct: 3 GRSGRYRDDEIPTLYVRQVHYSARPDDLRALFERMGPVRDVYIPLDYYTRESRGFAYVKF 62
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKN----MRPGRTHRSRSP 192
E +A++A+ +NG +L + + V+WA + + ++ R +RSRSP
Sbjct: 63 EFTRDAEDALRKLNGASILGRPIEVEWAEGQRKTKTEMRARDSYSSYRVRNRYRSRSP 120
>gi|383860217|ref|XP_003705587.1| PREDICTED: cleavage stimulation factor subunit 2-like [Megachile
rotundata]
Length = 441
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E++L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 152 NGGELLTQTLTVDWAFS 168
NG E+ +TL VD A +
Sbjct: 79 NGYEIGGRTLRVDNACT 95
>gi|356524836|ref|XP_003531034.1| PREDICTED: uncharacterized protein LOC100778928 [Glycine max]
Length = 267
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F +YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ +EAQ A+ ++G + + +TV +A
Sbjct: 65 KYADEAQKAVERLDGRMVDGREITVQFA 92
>gi|340520210|gb|EGR50447.1| predicted protein [Trichoderma reesei QM6a]
Length = 323
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 63/148 (42%), Gaps = 20/148 (13%)
Query: 67 LADRNFESLGTDGGPGPQR--------SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRN 118
+ DR E+ GP P+R + G + V +H + E+DL +F G I
Sbjct: 58 VHDRYEENTYRQRGPAPRRRRESPSGGDVRGTRLRVENIHYDLTEEDLDELFRRIGPITK 117
Query: 119 LHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKR 178
L L D R+G +G A + YE+ +A A+ +G Q + + S GPS PF
Sbjct: 118 LQLRYD-RSGRSEGVAFVTYESSSDAAEAVRQFDGANANGQPIRL-TILSGGPSRNPFDT 175
Query: 179 KNM----------RPGRTHRSRSPRRRY 196
M PG RS SP RRY
Sbjct: 176 AVMPGKPLSERISAPGGRSRSLSPHRRY 203
>gi|58265336|ref|XP_569824.1| RNA binding protein [Cryptococcus neoformans var. neoformans JEC21]
gi|57226056|gb|AAW42517.1| RNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 393
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 91 IILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITA 150
+I+V+G+ + + L +F EYG I + L L + +G KG A IE++ A A+
Sbjct: 60 VIVVSGLSKNVMKGHLDEIFSEYGRITGIDLPLFKVSGLNKGKAAIEFDTPAAASKAVKC 119
Query: 151 MNGGELLTQTLTVDWAFSNGP 171
M+GG+L L V + S P
Sbjct: 120 MDGGQLDGSFLNVQVSLSIKP 140
>gi|47220039|emb|CAG12187.1| unnamed protein product [Tetraodon nigroviridis]
Length = 296
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%)
Query: 84 QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEE 143
+R+ + I VT + E+ +E DLQ +F +G I ++L D+ TG KG+A I + E+
Sbjct: 209 RRADDNATIRVTNLSEDTREADLQELFRPFGAISRIYLAKDKNTGQSKGFAFISFHRRED 268
Query: 144 AQNAITAMNGGELLTQTLTVDWA 166
A AIT ++G L V+WA
Sbjct: 269 ASRAITGVSGFGYDHLILNVEWA 291
>gi|390439660|ref|ZP_10228043.1| putative RNA-binding protein rbpF [Microcystis sp. T1-4]
gi|389836940|emb|CCI32167.1| putative RNA-binding protein rbpF [Microcystis sp. T1-4]
Length = 97
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E ++D+ VF EYG+I+ +HL +DR T +G+A +E E + AI A+
Sbjct: 3 IYVGNLPFEVNQEDVVEVFTEYGKIKRVHLPIDRETKKKRGFAFVEMETPAQESAAIAAL 62
Query: 152 NGGELLTQTLTVDWAFSNGP 171
NG E + + L V+ A P
Sbjct: 63 NGAEWMGRELKVNQAREKEP 82
>gi|425448844|ref|ZP_18828688.1| putative RNA-binding protein rbpE [Microcystis aeruginosa PCC 7941]
gi|389767705|emb|CCI06977.1| putative RNA-binding protein rbpE [Microcystis aeruginosa PCC 7941]
Length = 97
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + + +DDL VF EYG ++ +H+ +D+ TG +G+A +E EN + AI A+
Sbjct: 3 IFVGNLSYDISQDDLVEVFKEYGNVQRVHIPVDKETGRKRGFAFVEMENKAQETTAIEAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + +++ V+ A
Sbjct: 63 DGAEWMGRSIKVNEA 77
>gi|345496803|ref|XP_003427819.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Nasonia vitripennis]
Length = 425
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E++L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 152 NGGELLTQTLTVDWAFS 168
NG E+ +TL VD A +
Sbjct: 79 NGYEIGGRTLRVDNACT 95
>gi|26351239|dbj|BAC39256.1| unnamed protein product [Mus musculus]
Length = 642
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|347964873|ref|XP_309173.5| AGAP000977-PA [Anopheles gambiae str. PEST]
gi|333466517|gb|EAA04971.6| AGAP000977-PA [Anopheles gambiae str. PEST]
Length = 163
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 65 SRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLD 124
++L++++ + LG Q WI V G+ + E D+ VF +YGEI N++L D
Sbjct: 11 TKLSEQDLK-LGGKSSWHDQYKSSAWI-FVGGLPYDLTEGDVLCVFSQYGEIVNVNLVRD 68
Query: 125 RRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVD 164
+ TG KG+A I YE+ A+ +NG +L+ +TL VD
Sbjct: 69 KATGKSKGFAFICYEDQRSTVLAVDNLNGIKLVGKTLRVD 108
>gi|321254530|ref|XP_003193105.1| RNA binding protein [Cryptococcus gattii WM276]
gi|317459574|gb|ADV21318.1| RNA binding protein, putative [Cryptococcus gattii WM276]
Length = 380
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 91 IILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITA 150
+I+V+G+ + + L +F EYG I + L L + +G KG A IE++N A A+
Sbjct: 60 VIVVSGLSKNVIKGHLDEIFSEYGRITGIDLPLFKVSGLNKGKAAIEFDNPAAASKAVKC 119
Query: 151 MNGGELLTQTLTVDWAFS 168
M+GG+L L V S
Sbjct: 120 MDGGQLDGSFLNVQRQIS 137
>gi|156553552|ref|XP_001601896.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Nasonia vitripennis]
Length = 434
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E++L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 152 NGGELLTQTLTVDWAFS 168
NG E+ +TL VD A +
Sbjct: 79 NGYEIGGRTLRVDNACT 95
>gi|443324398|ref|ZP_21053165.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
gi|442795980|gb|ELS05312.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
Length = 90
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + +++DL+ VF EYG++ +HL DR +G +G+A +E + +E AI+A+
Sbjct: 3 IYVGNLDYSLEKEDLEEVFSEYGKVTRVHLPTDRESGRKRGFAFVEMSSKDEENAAISAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + +TL V+ A
Sbjct: 63 DGAEWMERTLKVNEA 77
>gi|392588092|gb|EIW77425.1| translation initiation factor eIF3g [Coniophora puteana RWD-64-598
SS2]
Length = 298
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ QE+DL+++FG +G + +++ DR TG KG+A + +E AQ A+ +
Sbjct: 217 LRVTNISEDTQENDLRDLFGRFGRVARVYVGRDRETGAGKGFAFVSFEERAVAQKAMEKV 276
Query: 152 NGGELLTQTLTVDWA 166
+G L+V W+
Sbjct: 277 HGMGYDNLILSVQWS 291
>gi|332026262|gb|EGI66401.1| Cleavage stimulation factor 64 kDa subunit [Acromyrmex echinatior]
Length = 480
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E++L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 152 NGGELLTQTLTVDWAFS 168
NG E+ +TL VD A +
Sbjct: 79 NGYEIGGRTLRVDNACT 95
>gi|254414476|ref|ZP_05028242.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196178706|gb|EDX73704.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 96
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I + + +A EDDLQ VF +YG ++ + L DR TG V+G+A +E + + ++AI+ +
Sbjct: 3 IYIGNLSYQATEDDLQTVFADYGTVKRVVLPTDRETGRVRGFAFVEMTDEAQEESAISQL 62
Query: 152 NGGELLTQTLTVD 164
+G E + + L V+
Sbjct: 63 DGAEWMGRQLRVN 75
>gi|403257503|ref|XP_003921356.1| PREDICTED: RNA-binding protein 28 [Saimiri boliviensis boliviensis]
Length = 640
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + EDDL+ +F ++G + L +N+ R+ G ++G+A ++++N EA A+
Sbjct: 116 LIIRNLSFKCSEDDLKTIFAQFGAV--LEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKG 173
Query: 151 MNGGELLTQTLTVDWAFSN 169
MN E+ +T+ VDWA +
Sbjct: 174 MNMKEIKGRTVAVDWAVAK 192
>gi|242055641|ref|XP_002456966.1| hypothetical protein SORBIDRAFT_03g046480 [Sorghum bicolor]
gi|241928941|gb|EES02086.1| hypothetical protein SORBIDRAFT_03g046480 [Sorghum bicolor]
gi|448878374|gb|AGE46150.1| arginine/serine-rich splicing factor SR45 transcript I [Sorghum
bicolor]
Length = 428
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 43/80 (53%)
Query: 88 EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
E ++ + + E L+ +FG +GEI N+ L++DR +GY IE++ +A+ A
Sbjct: 103 ESAVLCIDHLSRNVNEAHLKEIFGNFGEIVNVELSMDRMVNLPRGYGYIEFKKRADAEKA 162
Query: 148 ITAMNGGELLTQTLTVDWAF 167
+ M+GG++ + + +
Sbjct: 163 LLYMDGGQIDGNVVKLRFTL 182
>gi|291391164|ref|XP_002712117.1| PREDICTED: RNA binding motif protein 28 isoform 2 [Oryctolagus
cuniculus]
Length = 755
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + EDDL+ +F ++G + L +N+ ++ G ++G+A ++++N EA A+
Sbjct: 116 LIIRNLSFKCSEDDLKTIFAQFGAV--LEVNVPKKPDGKMRGFAFVQFKNLLEAGKALKG 173
Query: 151 MNGGELLTQTLTVDWAFSN------GPSTGPFKRKNMRP 183
MN E+ +T+ VDWA + +GP K K+ P
Sbjct: 174 MNMKEIKGRTVAVDWAVAKDKYKDTQAVSGPGKGKSCEP 212
Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 88 EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
EG + + + +++E+DL + ++G+++ + + L T KG A ++ E AQ
Sbjct: 328 EGKTVFIRNLSFDSEEEDLGELLQQFGDLKYVRIVLHPDTEHSKGCAFAQFTTQEAAQKC 387
Query: 148 ITAMN------GGELLTQTLTVDWAFS 168
+ A + G +L + L VD A +
Sbjct: 388 LAAASPEVEGGGLKLDGRQLKVDLAVT 414
>gi|291391162|ref|XP_002712116.1| PREDICTED: RNA binding motif protein 28 isoform 1 [Oryctolagus
cuniculus]
Length = 767
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + EDDL+ +F ++G + L +N+ ++ G ++G+A ++++N EA A+
Sbjct: 116 LIIRNLSFKCSEDDLKTIFAQFGAV--LEVNVPKKPDGKMRGFAFVQFKNLLEAGKALKG 173
Query: 151 MNGGELLTQTLTVDWAFSN------GPSTGPFKRKNMRP 183
MN E+ +T+ VDWA + +GP K K+ P
Sbjct: 174 MNMKEIKGRTVAVDWAVAKDKYKDTQAVSGPGKGKSCEP 212
Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 88 EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
EG + + + +++E+DL + ++G+++ + + L T KG A ++ E AQ
Sbjct: 340 EGKTVFIRNLSFDSEEEDLGELLQQFGDLKYVRIVLHPDTEHSKGCAFAQFTTQEAAQKC 399
Query: 148 ITAMN------GGELLTQTLTVDWAFS 168
+ A + G +L + L VD A +
Sbjct: 400 LAAASPEVEGGGLKLDGRQLKVDLAVT 426
>gi|449279837|gb|EMC87291.1| Poly(U)-binding-splicing factor PUF60, partial [Columba livia]
Length = 513
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 41/61 (67%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 191 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSM 250
Query: 152 N 152
N
Sbjct: 251 N 251
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 94 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 153
Query: 152 NGGEL 156
N L
Sbjct: 154 NSVML 158
>gi|380028061|ref|XP_003697730.1| PREDICTED: cleavage stimulation factor subunit 2-like [Apis florea]
Length = 441
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E++L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 152 NGGELLTQTLTVDWAFS 168
NG E+ +TL VD A +
Sbjct: 79 NGYEIGGRTLRVDNACT 95
>gi|66516308|ref|XP_623321.1| PREDICTED: cleavage stimulation factor subunit 2 [Apis mellifera]
Length = 441
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E++L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 152 NGGELLTQTLTVDWAFS 168
NG E+ +TL VD A +
Sbjct: 79 NGYEIGGRTLRVDNACT 95
>gi|348541381|ref|XP_003458165.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oreochromis
niloticus]
Length = 513
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH + +DD+++VF +G+I++ L + TG KGY IEYE + AQ+A+ +M
Sbjct: 188 IYVASVHPDLSDDDIKSVFEAFGKIKSCMLAREPTTGRHKGYGFIEYEKAQSAQDAVASM 247
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 248 NLFDLGGQYLRVGKAVT 264
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 91 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEMPEAAQLALEQM 150
Query: 152 N 152
N
Sbjct: 151 N 151
>gi|344270941|ref|XP_003407300.1| PREDICTED: RNA-binding protein 28 isoform 1 [Loxodonta africana]
Length = 755
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + EDDL+ +F ++G + L +N+ R+ G ++G+A ++++N EA A+
Sbjct: 116 LIIRNLSFKCSEDDLKTIFAQFGAV--LEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKG 173
Query: 151 MNGGELLTQTLTVDWAFSN 169
MN E+ +T+ VDWA +
Sbjct: 174 MNMKEIKGRTVAVDWAVAK 192
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 88 EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
EG + + + +++E+DL + ++G+++ + + L T KG A +++ E AQ
Sbjct: 329 EGKTVFIRNLSFDSEEEDLGELLQQFGDLKYVRIVLHPDTEHSKGCAFVQFLTQEAAQKC 388
Query: 148 ITAMN------GGELLTQTLTVDWAFSNGPSTGPFKRKNMRP 183
+ A + G +L + L VD A + + +K +P
Sbjct: 389 LAAASPETEGGGLKLDGRQLKVDLAVTRDEAAKLQTKKVKKP 430
>gi|260834392|ref|XP_002612195.1| hypothetical protein BRAFLDRAFT_125379 [Branchiostoma floridae]
gi|229297569|gb|EEN68204.1| hypothetical protein BRAFLDRAFT_125379 [Branchiostoma floridae]
Length = 418
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 84 QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEE 143
Q S W+ V G+ E E D+ VF +YGEI N+++ D++TG KG+A I YEN +
Sbjct: 30 QYSDSAWV-FVGGLPYELTEGDVLCVFSQYGEIVNINMVRDKKTGKPKGFAFICYENQKS 88
Query: 144 AQNAITAMNGGELLTQTLTVD 164
A+ NG ++ +T+ VD
Sbjct: 89 TVLAVDNFNGVKIKGRTIRVD 109
>gi|356512057|ref|XP_003524737.1| PREDICTED: uncharacterized protein LOC100804370 [Glycine max]
Length = 267
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F +YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ +EAQ A+ ++G + + +TV +A
Sbjct: 65 KYADEAQKAVERLDGRMVDGREITVQFA 92
>gi|218201347|gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
gi|222640763|gb|EEE68895.1| hypothetical protein OsJ_27729 [Oryza sativa Japonica Group]
Length = 298
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDIRDTFSLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKR 178
+ EEAQ AI ++G + + + V +A GP+ P ++
Sbjct: 65 KYAEEAQKAIDRLDGRNVDGRNIMVQFA-KYGPNAEPIRK 103
>gi|371927697|pdb|3UWT|A Chain A, Crystal Structure Of A Rna Binding Domain Of Poly-U
Binding Splicing Factor 60kda (Puf60) From Homo Sapiens
At 2.50 A Resolution
Length = 200
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ +DD+++VF +G+I++ L D TG KGY IEYE + +Q+A+++
Sbjct: 112 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSX 171
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 172 NLFDLGGQYLRVGKAVT 188
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ + D T KG+A +EYE E AQ A+
Sbjct: 15 VYVGSIYYELGEDTIRQAFAPFGPIKSIDXSWDSVTXKHKGFAFVEYEVPEAAQLALEQX 74
Query: 152 NGGEL 156
N L
Sbjct: 75 NSVXL 79
>gi|448878376|gb|AGE46151.1| arginine/serine-rich splicing factor SR45 transcript II [Sorghum
bicolor]
Length = 414
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 43/80 (53%)
Query: 88 EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
E ++ + + E L+ +FG +GEI N+ L++DR +GY IE++ +A+ A
Sbjct: 89 ESAVLCIDHLSRNVNEAHLKEIFGNFGEIVNVELSMDRMVNLPRGYGYIEFKKRADAEKA 148
Query: 148 ITAMNGGELLTQTLTVDWAF 167
+ M+GG++ + + +
Sbjct: 149 LLYMDGGQIDGNVVKLRFTL 168
>gi|443477394|ref|ZP_21067245.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443017490|gb|ELS31918.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 95
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + +A +DDL +VF +YG ++ + L D+ TG V+G+A ++ E+ + + AI A+
Sbjct: 3 IYVGNLSYQAAKDDLTSVFSDYGTVKRVQLPTDQETGRVRGFAFVDMEDDAQEEAAIAAL 62
Query: 152 NGGELLTQTLTVDWAFSNGPST 173
N E + +TL V+ A G T
Sbjct: 63 NEAEWMGRTLRVNKAKPRGERT 84
>gi|31249706|gb|AAP46199.1| putative splicing factor [Oryza sativa Japonica Group]
gi|108708412|gb|ABF96207.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|218192921|gb|EEC75348.1| hypothetical protein OsI_11773 [Oryza sativa Indica Group]
gi|222625002|gb|EEE59134.1| hypothetical protein OsJ_11026 [Oryza sativa Japonica Group]
Length = 217
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+LV + + + DDL+ FG++G +++++L D TG +G+ I+Y + E+A +A M
Sbjct: 39 LLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKYHM 98
Query: 152 NGGELLTQTLTVDWAFSN 169
+G LL + +TV +A N
Sbjct: 99 DGQILLGREVTVVFAEEN 116
>gi|425472294|ref|ZP_18851145.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9701]
gi|389881662|emb|CCI37811.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9701]
Length = 97
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E ++D+ VF EYGEI+ +H +DR T +G+A +E E E+ AI A+
Sbjct: 3 IYVGNLPFEVDQEDVVEVFKEYGEIKRVHFPMDRETKRKRGFAFVEMETPEQEAKAIAAL 62
Query: 152 NGGELLTQTLTVDWAFSNGPS 172
+G + + + L V+ A P
Sbjct: 63 DGAQWMGRELKVNQAREREPK 83
>gi|108708411|gb|ABF96206.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 218
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+LV + + + DDL+ FG++G +++++L D TG +G+ I+Y + E+A +A M
Sbjct: 39 LLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKYHM 98
Query: 152 NGGELLTQTLTVDWAFSN 169
+G LL + +TV +A N
Sbjct: 99 DGQILLGREVTVVFAEEN 116
>gi|186681280|ref|YP_001864476.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186463732|gb|ACC79533.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 100
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E +E+DL++VF EYG ++N+ L +DR TG ++G+ +E E+ + AI A+
Sbjct: 3 IYVGNLSYEVKEEDLRHVFAEYGTVKNVQLPIDRETGRMRGFGFVEMESDAQETAAIEAL 62
Query: 152 NGGELLTQTLTVDWA 166
+ E + ++L V+ A
Sbjct: 63 DNAEWMGRSLKVNKA 77
>gi|345564220|gb|EGX47200.1| hypothetical protein AOL_s00097g39 [Arthrobotrys oligospora ATCC
24927]
Length = 333
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
G + VTG+H E+D+ +FG+YGEI ++ +D T +G+ + + ++A A
Sbjct: 76 GTNLFVTGIHPRLTEEDVTRLFGKYGEIIKCNIMVDPHTKESRGFGFVNFAQSDQADAAK 135
Query: 149 TAMNGGELLTQTLTVDWAFSNGPST-------GPFKRKNMRPG 184
A+ G +TL+++ A + P T GP KR + R G
Sbjct: 136 DALQGEVYEGRTLSIEKARRSRPRTPTPGKYFGPPKRDDFRRG 178
>gi|425434851|ref|ZP_18815315.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 9432]
gi|389675575|emb|CCH95322.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 9432]
Length = 97
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E ++ L +VF EYGE++ +H+ +D+ TG +G+A +E EN + AI A+
Sbjct: 3 IFVGNLSYEISQEALVDVFREYGEVKRVHIPVDKETGRKRGFAFVEMENKAQETTAIEAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + +++ V+ A
Sbjct: 63 DGAEWMGRSIKVNEA 77
>gi|126342916|ref|XP_001364467.1| PREDICTED: cleavage stimulation factor subunit 2-like [Monodelphis
domestica]
Length = 551
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|373955307|ref|ZP_09615267.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
gi|373891907|gb|EHQ27804.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
Length = 121
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + + +E +L+ VF E+GE+ + + DR TG KG+ IE + E AQ AI+ +
Sbjct: 3 IFVGSLPFKVEESELKEVFEEFGEVTTVKIITDRETGRSKGFGFIEMPDDEAAQKAISEV 62
Query: 152 NGGELLTQTLTVDWA 166
NG EL +T+ V+ A
Sbjct: 63 NGAELYGRTIVVNQA 77
>gi|425466928|ref|ZP_18846222.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
gi|389830427|emb|CCI27639.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
Length = 97
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E ++DL +VF EYG+++ +H+ +D+ TG +G+A +E E+ + AI A+
Sbjct: 3 IFVGNLSYEISQEDLVDVFKEYGKVQRVHIPVDKETGRKRGFAFVEMESKAQETTAIEAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + +++ V+ A
Sbjct: 63 DGAEWMGRSIKVNQA 77
>gi|440797518|gb|ELR18604.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 696
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V +H + DD++ VF +G +++ L + TG KGY +EYE + A+ AI M
Sbjct: 413 IYVGSIHWDLTSDDIKTVFEAFGTVKSCVLMPNPETGKHKGYGFVEYEESKSAEEAIQQM 472
Query: 152 NGGELLTQTLTVDWAFSNGP 171
NG +L + + V A S+ P
Sbjct: 473 NGWDLGGRPIKVGRAISSAP 492
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V ++ E E+D++ F +G ++++ L D T KG+A +EY + A A+ M
Sbjct: 253 IYVGSLNFELSEEDIKTAFSPFGPVKSVSLTKDPLTQRSKGFAFVEYAYPDAATAALKHM 312
Query: 152 NGGELLTQTLTV 163
NG L + L V
Sbjct: 313 NGFMLAGRQLKV 324
>gi|410950299|ref|XP_003981845.1| PREDICTED: ELAV-like protein 1 [Felis catus]
Length = 336
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 240 GLSGVNVPSNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 299
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 300 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 329
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ AI +
Sbjct: 32 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 91
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 92 NGLRLQSKTIKVSYA---RPSSEVIKDANL 118
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 118 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 177
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KNM + SP RR+
Sbjct: 178 NGHKPPGSSEPITVKFA------ANPNQNKNMAL-LSQLYHSPARRF 217
>gi|195025318|ref|XP_001986035.1| GH20760 [Drosophila grimshawi]
gi|193902035|gb|EDW00902.1| GH20760 [Drosophila grimshawi]
Length = 304
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V G+ +E E L N F +G+I ++ + +D + +G+A IEYEN+E+A +AI M
Sbjct: 8 VYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQKHRGFAFIEYENYEDAASAIDNM 67
Query: 152 NGGELLTQTLTVDWA 166
N EL +T+ V+ A
Sbjct: 68 NDSELCGRTIRVNLA 82
>gi|187607191|ref|NP_001120082.1| poly-U binding splicing factor 60KDa [Xenopus (Silurana)
tropicalis]
gi|165971204|gb|AAI58522.1| LOC100145091 protein [Xenopus (Silurana) tropicalis]
Length = 507
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V VH++ ++D+++VF +G+I++ L D TG KGY IEYE + +Q+A+++M
Sbjct: 176 IYVASVHQDLSDEDIKSVFEAFGKIKSCMLARDPTTGKHKGYGFIEYEKGQSSQDAVSSM 235
Query: 152 NGGELLTQTLTVDWAFS 168
N +L Q L V A +
Sbjct: 236 NLFDLGGQYLRVGKAVT 252
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V ++ E ED ++ F +G I+++ ++ D T KG+A +EYE E AQ A+ M
Sbjct: 79 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQM 138
Query: 152 NGGEL 156
N L
Sbjct: 139 NSVML 143
>gi|425440322|ref|ZP_18820627.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 9717]
gi|389719273|emb|CCH96865.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 9717]
Length = 98
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E ++ L +VF EYGE++ +H+ +DR TG +G+A +E EN + AI A+
Sbjct: 3 IFVGNLSYEISQEALVDVFREYGEVKRVHIPVDRETGRKRGFAFVEMENKGQEGAAIAAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + +++ V+ A
Sbjct: 63 DGAEWMGRSIKVNEA 77
>gi|427418082|ref|ZP_18908265.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425760795|gb|EKV01648.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 98
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + +A ++D+ +VF EYG +++ HL DR TG +G+A +E E E AI A+
Sbjct: 3 VYVGNLSYDATKEDVTDVFAEYGTVKSAHLPTDRETGRPRGFAFVEMETDAEETAAIEAL 62
Query: 152 NGGELLTQTLTVDWAFSNGPSTG 174
+G E + + L V+ A P G
Sbjct: 63 DGAEWMGRVLKVNKAKPREPRGG 85
>gi|392586895|gb|EIW76230.1| hypothetical protein CONPUDRAFT_111036 [Coniophora puteana
RWD-64-598 SS2]
Length = 321
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V G+H + E D+ +F +YGE+ +++L D+ TG KG+ + YE+ A+ +
Sbjct: 33 IYVGGLHFDLTEGDVITIFSQYGEVMDVNLPRDKHTGKTKGFGFLMYEDQRSTILAVDNL 92
Query: 152 NGGELLTQTLTVD 164
NG +L +TL VD
Sbjct: 93 NGANVLDKTLRVD 105
>gi|149276517|ref|ZP_01882661.1| RNA-binding protein [Pedobacter sp. BAL39]
gi|149233037|gb|EDM38412.1| RNA-binding protein [Pedobacter sp. BAL39]
Length = 100
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I +TG+ E ED+L VFG++G++++L + DR TG +G+ +E EEA+ AI M
Sbjct: 3 IFITGLPLEVGEDELTAVFGDFGQVKSLRIIKDRETGQSRGFGFVEMPVEEEAKEAIKRM 62
Query: 152 NGGE 155
NGG+
Sbjct: 63 NGGD 66
>gi|22478042|gb|AAH36719.1| Cstf2 protein [Mus musculus]
Length = 510
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|332029758|gb|EGI69627.1| ELAV-like protein 2 [Acromyrmex echinatior]
Length = 359
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 62 ERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHL 121
+R+S LA + L PG + GW I V + E +E+ L +FG +G ++++ +
Sbjct: 251 QRYSPLAG---DLLANSMLPGNTMNGAGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKV 307
Query: 122 NLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDW 165
D +T KG+ + N+EEA AI ++NG L + L V +
Sbjct: 308 IRDLQTNKCKGFGFVTMTNYEEAVVAIQSLNGYTLGNRVLQVSF 351
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
+I+G + V+G+ + + DL+N+F YG I + D TG KG I ++ EA+
Sbjct: 110 AIKGANLYVSGLPKNMAQQDLENLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRVEAE 169
Query: 146 NAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
AI +NG + + F+N PS K + P + + RR+
Sbjct: 170 RAIQELNGTIPKGSSEPITVKFANNPSN---NNKAIPPLAAYLAPQATRRF 217
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+++++F GE+ + L D+ +G GY + Y E+A+ AI +
Sbjct: 30 LIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRPEDAEKAINTL 89
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L +T+ V +A PS+ K N+
Sbjct: 90 NGLRLQNKTIKVSYA---RPSSEAIKGANL 116
>gi|322788027|gb|EFZ13868.1| hypothetical protein SINV_14012 [Solenopsis invicta]
Length = 291
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E++L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 152 NGGELLTQTLTVDWAFS 168
NG E+ +TL VD A +
Sbjct: 79 NGYEIGGRTLRVDNACT 95
>gi|632500|gb|AAB50269.1| polyadenylation factor 64 kDa subunit [Xenopus laevis]
Length = 497
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|255532088|ref|YP_003092460.1| RNP-1 like RNA-binding protein [Pedobacter heparinus DSM 2366]
gi|255345072|gb|ACU04398.1| RNP-1 like RNA-binding protein [Pedobacter heparinus DSM 2366]
Length = 101
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I +TG+ E ED+L VFG++G++++L + DR TG +G+ +E EEA+ AI M
Sbjct: 3 IFITGLPLEVGEDELTAVFGDFGQVKSLRIIKDRETGQSRGFGFVEMPVEEEAKEAIKRM 62
Query: 152 NGGE 155
NGG+
Sbjct: 63 NGGD 66
>gi|449498377|ref|XP_002191180.2| PREDICTED: cleavage stimulation factor subunit 2 [Taeniopygia
guttata]
Length = 575
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|410928271|ref|XP_003977524.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Takifugu rubripes]
Length = 358
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
GW I + + +EA E L +FG +G + N+ + D T KG+ + N+EEA AI
Sbjct: 275 GWCIFIYNLGQEADEAILWQLFGPFGAVVNVKVIRDFNTSKCKGFGFVTMSNYEEAAMAI 334
Query: 149 TAMNGGELLTQTLTVDWAFSNG 170
++NG L + L V + S G
Sbjct: 335 HSLNGYRLGDKVLQVSFKTSKG 356
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ A + DL+++F YG I N + +D+ +G +G A I ++ EA++AI +
Sbjct: 143 LYISGLPRTASQQDLEDMFSHYGRIINSRVLVDQASGVSRGVAFIRFDKRSEAEDAIKHL 202
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSP 192
NG + +TV +A + + G M G++ R P
Sbjct: 203 NGHTPPGSAEPITVKFATNPNQARGSQVMSQMYHGQSRRFGGP 245
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +++L+++F G++ + L D+ G GY + + N +A AI +
Sbjct: 57 LIVNYLPQSMSQEELRSLFSSVGDVESAKLIRDKVAGHSLGYGFVNFVNPSDAVRAINTL 116
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++TL V +A PS+ K N+
Sbjct: 117 NGLRLQSKTLKVSYA---RPSSEMIKDANL 143
>gi|332212188|ref|XP_003255200.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Nomascus leucogenys]
Length = 622
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|301788792|ref|XP_002929813.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ailuropoda melanoleuca]
Length = 552
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|395324282|gb|EJF56725.1| translation initiation factor 3, RNA-binding subunit [Dichomitus
squalens LYAD-421 SS1]
Length = 290
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ QE+DL+++FG +G + +++ DR TG KG+A + +E AQ A+ M
Sbjct: 210 LRVTNISEDTQENDLRDLFGGFGRVARVYVGRDRETGAGKGFAFVSFEEKAVAQKAMEKM 269
Query: 152 NGGELLTQTLTVDWA 166
+G L + W+
Sbjct: 270 HGRGYDNLILNIQWS 284
>gi|378464494|gb|AFC01196.1| eukaryotic translation initiation factor, partial [Ammopiptanthus
mongolicus]
Length = 147
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ +E DL ++F +G + +++ +D++TG +G+ + + N ++AQ AI +
Sbjct: 68 VRVTNLSEDTREPDLHDLFRPFGAVSRVYVAIDQKTGISRGFGFVNFVNKDDAQRAIDKL 127
Query: 152 NGGELLTQTLTVDWA 166
NG L V+WA
Sbjct: 128 NGYGYDNLILRVEWA 142
>gi|344275007|ref|XP_003409305.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Loxodonta africana]
Length = 609
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|9843653|emb|CAC03600.1| splicing factor SC35 [Arabidopsis thaliana]
Length = 303
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F +YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ +EA A+ ++G + + +TV +A
Sbjct: 65 KYKDEAHKAVERLDGRVVDGREITVQFA 92
>gi|194332803|ref|NP_001123707.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Xenopus
(Silurana) tropicalis]
gi|189442601|gb|AAI67314.1| LOC100170457 protein [Xenopus (Silurana) tropicalis]
Length = 498
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|410928269|ref|XP_003977523.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Takifugu rubripes]
Length = 334
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
GW I + + +EA E L +FG +G + N+ + D T KG+ + N+EEA AI
Sbjct: 251 GWCIFIYNLGQEADEAILWQLFGPFGAVVNVKVIRDFNTSKCKGFGFVTMSNYEEAAMAI 310
Query: 149 TAMNGGELLTQTLTVDWAFSNG 170
++NG L + L V + S G
Sbjct: 311 HSLNGYRLGDKVLQVSFKTSKG 332
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ A + DL+++F YG I N + +D+ +G +G A I ++ EA++AI +
Sbjct: 119 LYISGLPRTASQQDLEDMFSHYGRIINSRVLVDQASGVSRGVAFIRFDKRSEAEDAIKHL 178
Query: 152 NG 153
NG
Sbjct: 179 NG 180
Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +++L+++F G++ + L D+ G GY + + N +A AI +
Sbjct: 33 LIVNYLPQSMSQEELRSLFSSVGDVESAKLIRDKVAGHSLGYGFVNFVNPSDAVRAINTL 92
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++TL V +A PS+ K N+
Sbjct: 93 NGLRLQSKTLKVSYA---RPSSEMIKDANL 119
>gi|387915274|gb|AFK11246.1| eukaryotic translation initiation factor 3 subunit g [Callorhinchus
milii]
Length = 288
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 68 ADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT 127
A+R ES+ T+ +R+ + I VT + E+ +E DLQ +F +G I ++L D+ T
Sbjct: 190 ANRRGESMQTN-----RRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKNT 244
Query: 128 GFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPST 173
G KG+A I + E+A AI ++G L V+WA PST
Sbjct: 245 GQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWA---KPST 287
>gi|425434850|ref|ZP_18815314.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 9432]
gi|389675574|emb|CCH95321.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 9432]
Length = 97
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E +DDL VF +YG+++ +H+ +D+ TG +G+A +E EN + AI A+
Sbjct: 3 IFVGNLSYEISQDDLVEVFQDYGKVQRVHIPVDKETGRKRGFAFVEMENKAQEAKAIEAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G + + +++ V+ A
Sbjct: 63 DGADWMGRSIKVNEA 77
>gi|291404363|ref|XP_002718535.1| PREDICTED: cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kDa, tau variant [Oryctolagus cuniculus]
Length = 601
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|307153774|ref|YP_003889158.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306984002|gb|ADN15883.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 102
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E +ED+L VF EYG+++ +++ +DR TG +G+ +E E + +AITA+
Sbjct: 3 IYVGNLPFEVEEDNLNEVFAEYGKVKRVYMPVDRDTGRRRGFGFVEMETSAQEDSAITAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + + L V+ A
Sbjct: 63 DGAEWMGKQLKVNKA 77
>gi|157821159|ref|NP_001101056.1| cleavage stimulation factor subunit 2 tau variant [Rattus
norvegicus]
gi|149062701|gb|EDM13124.1| rCG47773 [Rattus norvegicus]
Length = 629
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|47225344|emb|CAG09844.1| unnamed protein product [Tetraodon nigroviridis]
Length = 570
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 28 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 87
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 88 NGREFSGRALRVDNAAS 104
>gi|331242735|ref|XP_003334013.1| RNA-binding protein rsd1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 546
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 80 GPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYE 139
GPGP + V ++ +DD++ VF +G+I + L+ D+ TG KGYA ++++
Sbjct: 414 GPGPNDPNSYARLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFK 473
Query: 140 NFEEAQNAITAMNGGELLTQTLTVD 164
N +A+NA+ MNG +L + L V+
Sbjct: 474 NMHDAKNAMEKMNGFQLAGRALRVE 498
>gi|195123191|ref|XP_002006092.1| GI20843 [Drosophila mojavensis]
gi|193911160|gb|EDW10027.1| GI20843 [Drosophila mojavensis]
Length = 303
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V G+ +E E L N F +G+I ++ + +D + +G+A IEYEN+E+A +AI M
Sbjct: 8 VYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQKHRGFAFIEYENYEDAASAIDNM 67
Query: 152 NGGELLTQTLTVDWA 166
N EL +T+ V+ A
Sbjct: 68 NDSELCGRTIRVNLA 82
>gi|20072518|gb|AAH26995.1| Cstf2t protein [Mus musculus]
Length = 637
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|301773128|ref|XP_002921958.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Ailuropoda
melanoleuca]
Length = 325
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 10/121 (8%)
Query: 45 GAPKKTKGRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQED 104
G P +KGR FR H G G P + GW I + + ++A E
Sbjct: 208 GGPPPSKGR-FRFSPMGVDHMS---------GLSGVNVPGNASSGWCIFIYNLGQDADEG 257
Query: 105 DLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVD 164
L +FG +G + N+ + D T KG+ + N+EEA AI ++NG L + L V
Sbjct: 258 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVS 317
Query: 165 W 165
+
Sbjct: 318 F 318
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ AI +
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 82 NGLRLQSKTIKVSYA---RPSSEVIKDANL 108
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KN+ + SP RR+
Sbjct: 168 NGHKPPGSSEPITVKFA------ANPNQNKNVAL-LSQLYHSPARRF 207
>gi|158339748|ref|YP_001520755.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158340644|ref|YP_001521812.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158309989|gb|ABW31605.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158310885|gb|ABW32498.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 95
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + + +D++Q VF EYG + N+H+ DR TG ++G+A +E N E AI +
Sbjct: 3 IYVGNLSYDVTQDEIQAVFAEYGAVSNVHVPKDRETGRMRGFAFVELGNDAEESKAIEEL 62
Query: 152 NGGELLTQTLTVDWA 166
G E + +TL V+ A
Sbjct: 63 EGAEWMGRTLKVNKA 77
>gi|88682979|gb|AAI05553.1| CSTF2 protein [Bos taurus]
Length = 632
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|41055906|ref|NP_957293.1| eukaryotic translation initiation factor 3 subunit G [Danio rerio]
gi|29124629|gb|AAH49046.1| Eukaryotic translation initiation factor 3, subunit G [Danio rerio]
Length = 293
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%)
Query: 84 QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEE 143
+R+ + I VT + E+ +E DLQ +F +G I ++L D+ TG KG+ALI + E+
Sbjct: 206 RRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKNTGQSKGFALISFHRRED 265
Query: 144 AQNAITAMNGGELLTQTLTVDWA 166
A AI ++G L V+WA
Sbjct: 266 AARAIAGVSGFGYDHLILNVEWA 288
>gi|299748212|ref|XP_001837545.2| RNA-binding protein Cwf29 [Coprinopsis cinerea okayama7#130]
gi|298407867|gb|EAU84461.2| RNA-binding protein Cwf29 [Coprinopsis cinerea okayama7#130]
Length = 321
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V G+H + E D+ +F +YGEI ++++ D+ TG +G+A + YE+ A+ +
Sbjct: 33 IFVGGLHNDLTEGDVITIFSQYGEIMDINMPRDKETGKPRGFAFLMYEDQRSTILAVDNL 92
Query: 152 NGGELLTQTLTVD 164
NG ++L +TL VD
Sbjct: 93 NGAKVLERTLRVD 105
>gi|197246895|gb|AAI69065.1| Cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Rattus
norvegicus]
Length = 629
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|410043862|ref|XP_003951699.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
troglodytes]
Length = 576
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|426252729|ref|XP_004020055.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Ovis aries]
Length = 646
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|21619877|gb|AAH33135.1| Similar to cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kD, partial [Homo sapiens]
Length = 559
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 17 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 76
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 77 NGREFSGRALRVDNAAS 93
>gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 267
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V G+ + + L+ FG+YGE+ + +DR TG +G+A + Y + EEA +AI A+
Sbjct: 42 VFVGGISYQTDDTSLREAFGKYGEVIEARVIIDRETGRSRGFAFVTYTSSEEASSAIQAL 101
Query: 152 NGGELLTQTLTVDWA 166
+G +L + + V++A
Sbjct: 102 DGQDLHGRRVRVNYA 116
>gi|417403608|gb|JAA48603.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15 [Desmodus rotundus]
Length = 647
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|409047364|gb|EKM56843.1| hypothetical protein PHACADRAFT_254184 [Phanerochaete carnosa
HHB-10118-sp]
Length = 287
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ QE+DL+++FG +G + +++ DR TG KG+A + +E+ AQ A+
Sbjct: 207 LRVTNISEDTQENDLRDLFGAFGRVARVYVGRDRETGAGKGFAFVSFEDKAVAQRAMEKT 266
Query: 152 NGGELLTQTLTVDWA 166
+G L+V W+
Sbjct: 267 HGRGYDNLILSVQWS 281
>gi|255642028|gb|ACU21281.1| unknown [Glycine max]
Length = 254
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F +YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ +EAQ A+ ++G + + +TV +A
Sbjct: 65 KYADEAQKAVERLDGRMVDGREITVQFA 92
>gi|428779944|ref|YP_007171730.1| RRM domain-containing RNA-binding protein [Dactylococcopsis salina
PCC 8305]
gi|428694223|gb|AFZ50373.1| RRM domain-containing RNA-binding protein [Dactylococcopsis salina
PCC 8305]
Length = 95
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + +DDL VF EYG ++ +HL DR TG ++G+ +E + E NAI+ +
Sbjct: 3 IYVGNLDYSVTQDDLSEVFAEYGTVKRVHLPTDRETGRMRGFGFVEMASETEESNAISEL 62
Query: 152 NGGELLTQTLTVD 164
+G E + + L V+
Sbjct: 63 DGAEWMGRELKVN 75
>gi|62896707|dbj|BAD96294.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant variant [Homo sapiens]
Length = 616
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGSIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|403167505|ref|XP_003889826.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375167060|gb|EHS63323.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 205
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
G + V+G+ A++ DL +F +YG ++ L D T V+G+ + E EEA A+
Sbjct: 22 GNNLHVSGISTRAEDADLYELFSKYGRVQKAQLMRDPNTKEVRGFGFVTMETCEEADAAM 81
Query: 149 TAMNGGELLTQTLTVDWA 166
TA+NG +L + L V+ A
Sbjct: 82 TALNGADLFGKPLGVEKA 99
>gi|194042423|ref|XP_001926989.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Sus scrofa]
Length = 615
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|11762098|gb|AAG40327.1|AF322194_1 variant polyadenylation protein CSTF-64 [Mus musculus]
Length = 630
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|148277061|ref|NP_112539.2| cleavage stimulation factor subunit 2 tau variant [Mus musculus]
gi|71153235|sp|Q8C7E9.2|CSTFT_MOUSE RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant; AltName:
Full=TauCstF-64
gi|26330250|dbj|BAC28855.1| unnamed protein product [Mus musculus]
gi|26350087|dbj|BAC38683.1| unnamed protein product [Mus musculus]
Length = 632
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|26341156|dbj|BAC34240.1| unnamed protein product [Mus musculus]
Length = 632
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|15237641|ref|NP_201225.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|30697964|ref|NP_851261.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|9759396|dbj|BAB09851.1| unnamed protein product [Arabidopsis thaliana]
gi|17380868|gb|AAL36246.1| unknown protein [Arabidopsis thaliana]
gi|21689657|gb|AAM67450.1| unknown protein [Arabidopsis thaliana]
gi|22022546|gb|AAM83231.1| AT5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|23505861|gb|AAN28790.1| At5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|332010470|gb|AED97853.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|332010471|gb|AED97854.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
Length = 303
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F +YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ +EA A+ ++G + + +TV +A
Sbjct: 65 KYKDEAHKAVERLDGRVVDGREITVQFA 92
>gi|417412278|gb|JAA52529.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15, partial [Desmodus rotundus]
Length = 678
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 52 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 111
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 112 NGREFSGRALRVDNAAS 128
>gi|410952831|ref|XP_003983081.1| PREDICTED: RNA-binding protein 28-like, partial [Felis catus]
Length = 302
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + EDDL+ VF +YG + L +++ R+ G ++G+A ++++N EA A+ +
Sbjct: 116 LIIRNLSFKCSEDDLRTVFAQYGAV--LEVSIPRKPDGKMRGFAFVQFKNLLEAGKALKS 173
Query: 151 MNGGELLTQTLTVDWAFSN 169
MN E+ +T+ VDWA +
Sbjct: 174 MNMKEIKGRTVAVDWAVAK 192
>gi|336088638|ref|NP_001229511.1| cleavage stimulation factor subunit 2 tau variant [Bos taurus]
gi|296472872|tpg|DAA14987.1| TPA: CSTF2 protein-like [Bos taurus]
Length = 642
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|426252727|ref|XP_004020054.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 3 [Ovis aries]
Length = 623
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|426252723|ref|XP_004020052.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Ovis aries]
Length = 572
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|345493619|ref|XP_003427110.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Nasonia vitripennis]
Length = 383
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 62 ERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHL 121
+R+S LA + L PG + GW I V + E +E+ L +FG +G ++++ +
Sbjct: 275 QRYSPLAG---DLLANSMLPGNAMNGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKV 331
Query: 122 NLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDW 165
D +T KG+ + N+EEA AI ++NG L + L V +
Sbjct: 332 IRDLQTNKCKGFGFVTMTNYEEAVVAIQSLNGYTLGNRVLQVSF 375
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +++++++F GE+ + L D+ TG GY + Y E+A+ AI +
Sbjct: 30 LIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKLTGQSLGYGFVNYHRPEDAEKAINTL 89
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L +T+ V +A PS+ K N+
Sbjct: 90 NGLRLQNKTIKVSYA---RPSSEAIKGANL 116
>gi|307194503|gb|EFN76795.1| ELAV-like protein 2 [Harpegnathos saltator]
Length = 349
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 62 ERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHL 121
+R+S LA + L PG + GW I V + E +E+ L +FG +G ++++ +
Sbjct: 241 QRYSPLAG---DLLANSMLPGNTMNGAGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKV 297
Query: 122 NLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDW 165
D +T KG+ + N+EEA AI ++NG L + L V +
Sbjct: 298 IRDLQTNKCKGFGFVTMTNYEEAVVAIQSLNGYTLGNRVLQVSF 341
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
+I+G + V+G+ + + DL+N+F YG I + D TG KG I ++ EA+
Sbjct: 109 AIKGANLYVSGLPKNMAQQDLENLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRVEAE 168
Query: 146 NAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
AI +NG + + F+N PS K + P + + RR+
Sbjct: 169 RAIQELNGTIPKGSSEPITVKFANNPSN---NNKAIPPLAAYLAPQATRRF 216
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+++++F GE+ + L D+ +G GY + Y E+A+ AI+ +
Sbjct: 29 LIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRPEDAEKAISTL 88
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L +T+ V +A PS+ K N+
Sbjct: 89 NGLRLQNKTIKVSYA---RPSSEAIKGANL 115
>gi|410928273|ref|XP_003977525.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Takifugu rubripes]
Length = 368
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
GW I + + +EA E L +FG +G + N+ + D T KG+ + N+EEA AI
Sbjct: 285 GWCIFIYNLGQEADEAILWQLFGPFGAVVNVKVIRDFNTSKCKGFGFVTMSNYEEAAMAI 344
Query: 149 TAMNGGELLTQTLTVDWAFSNG 170
++NG L + L V + S G
Sbjct: 345 HSLNGYRLGDKVLQVSFKTSKG 366
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ A + DL+++F YG I N + +D+ +G +G A I ++ EA++AI +
Sbjct: 153 LYISGLPRTASQQDLEDMFSHYGRIINSRVLVDQASGVSRGVAFIRFDKRSEAEDAIKHL 212
Query: 152 NG 153
NG
Sbjct: 213 NG 214
>gi|395820735|ref|XP_003783716.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Otolemur garnettii]
Length = 601
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|170585176|ref|XP_001897362.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158595237|gb|EDP33806.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 340
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G G R E + V VH A+ DDL+ +F + G +R++++ LD T +G+A +++
Sbjct: 3 GRRGSYRDDEIPTLYVRQVHYSARPDDLRALFEQMGPVRDVYIPLDYYTRESRGFAYVKF 62
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKN----MRPGRTHRSRSP 192
E +A++A+ +NG +L + + V+WA + + ++ R +RSRSP
Sbjct: 63 EFTRDAEDALRELNGTSILGRRIEVEWAEGQRKTKTEMRARDSYNSYRVRNRYRSRSP 120
>gi|50510589|dbj|BAD32280.1| mKIAA0689 protein [Mus musculus]
Length = 643
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 29 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 88
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 89 NGREFSGRALRVDNAAS 105
>gi|291408103|ref|XP_002720432.1| PREDICTED: cleavage stimulation factor subunit 2 [Oryctolagus
cuniculus]
Length = 576
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|443478888|ref|ZP_21068579.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443015762|gb|ELS30586.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 109
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E EDDL+ VF EYG+I +HL +DR +G +G+A +E +E AI A+
Sbjct: 3 IYVGNLSYEVTEDDLKAVFSEYGKITRVHLPIDRESGRPRGFAFVEMTEEKEEDAAIVAL 62
Query: 152 NGGELLTQTLTVDWA 166
+ E + + L V+ A
Sbjct: 63 DEAEWMGRALKVNKA 77
>gi|86606333|ref|YP_475096.1| RNA-binding protein [Synechococcus sp. JA-3-3Ab]
gi|86554875|gb|ABC99833.1| putative RNA-binding protein [Synechococcus sp. JA-3-3Ab]
Length = 96
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + +A E+DL+ VF EYG ++ + L +DR TG +G+A +E EN + Q AI +
Sbjct: 3 IFVGNLSFKASEEDLRLVFSEYGTVKQIKLPVDRETGRKRGFAFVELENEADEQKAIDEL 62
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKR 178
+G + + L V+ A G +R
Sbjct: 63 DGATWMGRDLRVNKAMPRQAGAGGGRR 89
>gi|26328597|dbj|BAC28037.1| unnamed protein product [Mus musculus]
Length = 580
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|284929607|ref|YP_003422129.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
gi|284810051|gb|ADB95748.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
Length = 81
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + EA E D+ NVF EYGE++ ++L DR TG ++G+ +E E + AI +
Sbjct: 3 IYVGNLSFEATEADVTNVFKEYGEVKKVYLPSDRETGKMRGFGFVEMETENQESAAIDKL 62
Query: 152 NGGELLTQTLTVDWA 166
NG E + + L V+ A
Sbjct: 63 NGSEWMGRILKVNKA 77
>gi|148709763|gb|EDL41709.1| cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Mus
musculus]
Length = 644
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 30 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 89
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 90 NGREFSGRALRVDNAAS 106
>gi|18875338|ref|NP_573459.1| cleavage stimulation factor subunit 2 [Mus musculus]
gi|71153229|sp|Q8BIQ5.2|CSTF2_MOUSE RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|11139720|gb|AAG31814.1|AF317552_1 polyadenylation protein CSTF64 [Mus musculus]
gi|26353226|dbj|BAC40243.1| unnamed protein product [Mus musculus]
Length = 580
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|444707906|gb|ELW49054.1| Cleavage stimulation factor subunit 2 tau variant [Tupaia
chinensis]
Length = 654
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|428179023|gb|EKX47896.1| hypothetical protein GUITHDRAFT_106442 [Guillardia theta CCMP2712]
Length = 563
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 51/90 (56%)
Query: 104 DDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTV 163
D+L+ VF +G I ++++ G +G+A +E+EN+ + + A+ + +G L + L++
Sbjct: 325 DELEQVFNRFGRILDVYIPRSYYKGIPRGFAFVEFENYLDCKAALRSYDGTRLDGRVLSI 384
Query: 164 DWAFSNGPSTGPFKRKNMRPGRTHRSRSPR 193
+A N S+G +R+N +P + PR
Sbjct: 385 CYAQMNRKSSGEMRRRNRQPRHPESYKRPR 414
>gi|426223062|ref|XP_004005698.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ovis aries]
Length = 607
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|355681345|gb|AER96778.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Mustela
putorius furo]
Length = 582
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|409051610|gb|EKM61086.1| hypothetical protein PHACADRAFT_247456 [Phanerochaete carnosa
HHB-10118-sp]
Length = 584
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%)
Query: 81 PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYEN 140
PG G + V +H E D++ VF +GE+ + L+ D TG KGYA ++Y+
Sbjct: 349 PGVSSHHGGMQLYVGSLHFNLTESDIRQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKR 408
Query: 141 FEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
E+A+ A+ M G EL +TL V+ G
Sbjct: 409 GEDAKMALEQMEGFELAGRTLRVNTVHEKG 438
>gi|297797433|ref|XP_002866601.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
gi|297312436|gb|EFH42860.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F +YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ +EA A+ ++G + + +TV +A
Sbjct: 65 KYKDEAHKAVERLDGRVVDGREITVQFA 92
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%)
Query: 91 IILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITA 150
++ V + +A ED L F EYG+I+++ + DR TG KG+A +E+ + E ++ A
Sbjct: 145 VLFVGNLSWDATEDTLWETFNEYGDIKSVRVPTDRETGKPKGFAYVEFSDIEASKKAFEG 204
Query: 151 MNGGELLTQTLTVDWAFSNGPSTGP 175
G E+ + + VD++ P+ P
Sbjct: 205 AAGAEVAGRNIRVDFSQPRDPNGPP 229
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Query: 63 RHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLN 122
+ +LAD N P + S I V + D L F E GE+ + +
Sbjct: 24 KKVKLADGN-------AAPAEEASDATKTIFVGKLSWNVDNDWLAQEFAECGEVVSARVQ 76
Query: 123 LDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVD 164
+DR TG +G+ + + EA +A A NG E+ + + +D
Sbjct: 77 MDRNTGKSRGFGYVTFATV-EAVDAAIAQNGKEIDGRAVNID 117
>gi|426252725|ref|XP_004020053.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Ovis aries]
Length = 612
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|410988989|ref|XP_004000752.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
2 [Felis catus]
Length = 577
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|402880821|ref|XP_003903988.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Papio
anubis]
Length = 620
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|284929630|ref|YP_003422152.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
gi|284810074|gb|ADB95771.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
Length = 96
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + + ++DL VF +YGE++ +H+ DR TG ++G+A +E + ++ + AI+ +
Sbjct: 3 IYVGNLSYDVTKEDLNEVFTDYGEVKRVHIPTDRDTGRMRGFAFVEMNSDDQEEQAISTL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + +TL V+ A
Sbjct: 63 DGAEWMGRTLKVNKA 77
>gi|431895723|gb|ELK05144.1| Cleavage stimulation factor 64 kDa subunit [Pteropus alecto]
Length = 577
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|74007924|ref|XP_861405.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 5 [Canis
lupus familiaris]
Length = 577
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|348570430|ref|XP_003471000.1| PREDICTED: cleavage stimulation factor subunit 2-like [Cavia
porcellus]
Length = 577
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|335306285|ref|XP_003360436.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Sus scrofa]
Length = 592
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|301788318|ref|XP_002929575.1| PREDICTED: cleavage stimulation factor subunit 2-like [Ailuropoda
melanoleuca]
Length = 582
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|196115100|ref|NP_001124486.1| cleavage stimulation factor, 3' pre-RNA subunit 2 [Rattus
norvegicus]
gi|195539770|gb|AAI68251.1| Cstf2 protein [Rattus norvegicus]
Length = 575
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|195382061|ref|XP_002049750.1| GJ20579 [Drosophila virilis]
gi|194144547|gb|EDW60943.1| GJ20579 [Drosophila virilis]
Length = 302
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V G+ +E E L N F +G+I ++ + +D + +G+A IEYEN+E+A +AI M
Sbjct: 8 VYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQKHRGFAFIEYENYEDAASAIDNM 67
Query: 152 NGGELLTQTLTVDWA 166
N EL +T+ V+ A
Sbjct: 68 NDSELCGRTIRVNLA 82
>gi|119589356|gb|EAW68950.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_b [Homo sapiens]
Length = 445
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 72 FESLGTDGGPG------PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDR 125
F +G D G P + GW I + + ++A E L +FG +G + N+ + D
Sbjct: 339 FSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDF 398
Query: 126 RTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDW 165
T KG+ + N+EEA AI ++NG L + L V +
Sbjct: 399 NTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSF 438
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ AI +
Sbjct: 141 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 200
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 201 NGLRLQSKTIKVSYA---RPSSEVIKDANL 227
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 227 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 286
Query: 152 NG 153
NG
Sbjct: 287 NG 288
>gi|380798899|gb|AFE71325.1| cleavage stimulation factor subunit 2, partial [Macaca mulatta]
Length = 575
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 16 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 75
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 76 NGREFSGRALRVDNAAS 92
>gi|194373969|dbj|BAG62297.1| unnamed protein product [Homo sapiens]
Length = 553
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|332861156|ref|XP_529072.3| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
troglodytes]
gi|397478198|ref|XP_003810440.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
paniscus]
gi|426396655|ref|XP_004064547.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Gorilla
gorilla gorilla]
Length = 597
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|311276614|ref|XP_003135279.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Sus scrofa]
Length = 572
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|402910773|ref|XP_003918026.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Papio
anubis]
gi|402910775|ref|XP_003918027.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Papio
anubis]
Length = 577
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|192764314|gb|ACF05701.1| alphaCstF-64 variant 4 [Mus musculus]
Length = 554
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|119224067|gb|AAI26544.1| CSTF2 protein [Bos taurus]
Length = 592
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|4557493|ref|NP_001316.1| cleavage stimulation factor subunit 2 [Homo sapiens]
gi|332861154|ref|XP_003317595.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Pan
troglodytes]
gi|397478196|ref|XP_003810439.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Pan
paniscus]
gi|426396653|ref|XP_004064546.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Gorilla
gorilla gorilla]
gi|461847|sp|P33240.1|CSTF2_HUMAN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|181139|gb|AAA35724.1| cleavage stimulation factor [Homo sapiens]
gi|17389334|gb|AAH17712.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Homo
sapiens]
gi|32879899|gb|AAP88780.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Homo
sapiens]
gi|61359609|gb|AAX41742.1| cleavage stimulation factor 3' pre-RNA subunit 2 [synthetic
construct]
gi|61359616|gb|AAX41743.1| cleavage stimulation factor 3' pre-RNA subunit 2 [synthetic
construct]
gi|119623223|gb|EAX02818.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, isoform
CRA_a [Homo sapiens]
gi|123981258|gb|ABM82458.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[synthetic construct]
gi|123996091|gb|ABM85647.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[synthetic construct]
gi|261860120|dbj|BAI46582.1| Cleavage stimulation factor 64 kDa subunit [synthetic construct]
gi|410256936|gb|JAA16435.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
gi|410289934|gb|JAA23567.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
Length = 577
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|390480015|ref|XP_003735829.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|354476121|ref|XP_003500273.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Cricetulus griseus]
Length = 614
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|321472566|gb|EFX83536.1| hypothetical protein DAPPUDRAFT_194972 [Daphnia pulex]
Length = 366
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 38 LKSAITGGAPKKTKGRGFREEADSERHSRLADRNFESLGT-DGGP-GPQRSIEGWIILVT 95
L A+TG ++ G + +RLA N ++ + + GP GP R + V
Sbjct: 65 LAIALTG---QRLCGVPIVVQPTQAEKNRLAGSNMPAMSSFNKGPNGPMR------LYVG 115
Query: 96 GVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGE 155
+H ED L+++F +G+I ++ L +D TG KGY I + N E+A+ A+ +NG E
Sbjct: 116 SLHFNITEDMLRSIFEPFGKIEHMQLMIDTETGRSKGYGFITFRNAEDAKKAMEQLNGFE 175
Query: 156 L 156
L
Sbjct: 176 L 176
>gi|440634550|gb|ELR04469.1| hypothetical protein GMDG_06775 [Geomyces destructans 20631-21]
Length = 294
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 94 VTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNG 153
VT V E A+ED+L+ +F +G + + L DR TG KG+A I + N ++A A +AM+G
Sbjct: 218 VTNVSELAEEDELRAMFQRFGHVTRVFLAKDRETGMAKGFAFISFTNRDDAAKACSAMDG 277
Query: 154 GELLTQTLTVDWA 166
L V++A
Sbjct: 278 FGFKHLILRVEFA 290
>gi|426257831|ref|XP_004022525.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Ovis
aries]
Length = 592
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|426257829|ref|XP_004022524.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Ovis
aries]
Length = 572
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|20380061|gb|AAH28239.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Homo sapiens]
gi|325463311|gb|ADZ15426.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [synthetic construct]
Length = 616
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|410974961|ref|XP_003993907.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Felis
catus]
Length = 613
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|348576422|ref|XP_003473986.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Cavia porcellus]
Length = 630
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|354474899|ref|XP_003499667.1| PREDICTED: cleavage stimulation factor subunit 2 [Cricetulus
griseus]
gi|344238061|gb|EGV94164.1| Cleavage stimulation factor 64 kDa subunit [Cricetulus griseus]
Length = 558
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VCVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|297632376|ref|NP_001172077.1| ELAV-like protein 1 [Oryctolagus cuniculus]
gi|296399062|gb|ADH10369.1| embryonic lethal abnormal vision-like 1 protein [Oryctolagus
cuniculus]
Length = 326
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 230 GLSGVNVPGNASSGWCIFIYNLGQDAHEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 289
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 290 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 319
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +++L+++F GE+ + L D+ G GY + Y ++A+ AI +
Sbjct: 22 LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAEKAINTL 81
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 82 NGLRLQSKTIKVSYA---RPSSEVIKDANL 108
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KN+ + SP RR+
Sbjct: 168 NGHKPPGSSEPITVKFA------ANPNQNKNVAL-LSQLYHSPARRF 207
>gi|192764310|gb|ACF05699.1| betaCstF-64 variant 2 [Homo sapiens]
Length = 597
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|388452994|ref|NP_001253727.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|355758732|gb|EHH61510.1| hypothetical protein EGM_21244 [Macaca fascicularis]
gi|383416951|gb|AFH31689.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|384946038|gb|AFI36624.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|387541538|gb|AFJ71396.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
Length = 620
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|147898871|ref|NP_001080179.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Xenopus
laevis]
gi|27735464|gb|AAH41291.1| Cstf-64 protein [Xenopus laevis]
Length = 518
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|332254742|ref|XP_003276491.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Nomascus leucogenys]
Length = 577
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|296235968|ref|XP_002763125.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Callithrix jacchus]
Length = 597
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|27807239|ref|NP_777110.1| cleavage stimulation factor subunit 2 [Bos taurus]
gi|71153228|sp|Q8HXM1.1|CSTF2_BOVIN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|24416593|gb|AAN05427.1| CstF-64 [Bos taurus]
gi|296470997|tpg|DAA13112.1| TPA: cleavage stimulation factor 64 kDa subunit [Bos taurus]
Length = 572
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|410353769|gb|JAA43488.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
Length = 577
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|403298762|ref|XP_003940176.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403298764|ref|XP_003940177.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 577
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|354476123|ref|XP_003500274.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Cricetulus griseus]
Length = 623
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|351709510|gb|EHB12429.1| Cleavage stimulation factor 64 kDa subunit [Heterocephalus glaber]
Length = 597
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|148237069|ref|NP_001084078.1| ELAV-like protein 1-A [Xenopus laevis]
gi|123909821|sp|Q1JQ73.1|ELV1A_XENLA RecName: Full=ELAV-like protein 1-A; AltName: Full=36 kDa
embryonic-type cytoplasmic polyadenylation
element-binding protein; Short=36 kDa eCPE-binding
protein; Short=36 kDa eCPEB; Short=p36; AltName:
Full=Protein ElrA-A; Short=ElrA
gi|94574290|gb|AAI16460.1| ElrA protein [Xenopus laevis]
Length = 337
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
GW I V + ++A E L +FG +G + N+ + D T KG+ + N+EEA AI
Sbjct: 254 GWCIFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAI 313
Query: 149 TAMNGGELLTQTLTVDW 165
++NG L +TL V +
Sbjct: 314 ASLNGYRLGDKTLQVSF 330
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 14/101 (13%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGF-----------VKGYALIEYEN 140
++V + + +D+L+++F GE+ + L D+ GF GY + Y N
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGFEMRSSSLSKGHSLGYGFVNYLN 81
Query: 141 FEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
++A+ AI +NG L ++T+ V +A PS+ K N+
Sbjct: 82 AKDAERAINTLNGLRLQSKTIKVSFA---RPSSESIKDANL 119
Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
SI+ + ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+
Sbjct: 113 SIKDANLYISGLPRTMTQKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAE 172
Query: 146 NAITAMNGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
AI + NG + ++ +TV +A P + KN+ + SP RR+
Sbjct: 173 EAIASFNGHKPPGSSEPITVKFA------ANPNQNKNVAL-LSQICHSPARRF 218
>gi|431839028|gb|ELK00957.1| Cleavage stimulation factor 64 kDa subunit, tau variant [Pteropus
alecto]
Length = 601
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|197100099|ref|NP_001125111.1| cleavage stimulation factor subunit 2 [Pongo abelii]
gi|71153230|sp|Q5RDA3.1|CSTF2_PONAB RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|55726993|emb|CAH90254.1| hypothetical protein [Pongo abelii]
Length = 577
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|403412344|emb|CCL99044.1| predicted protein [Fibroporia radiculosa]
Length = 599
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%)
Query: 81 PGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYEN 140
PG G + V +H E D++ VF +GE+ + L+ D TG KGYA ++Y+
Sbjct: 364 PGVSAPHGGMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKR 423
Query: 141 FEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
E+A+ A+ M G EL +TL V+ G
Sbjct: 424 AEDARMALEQMEGFELAGRTLRVNTVHEKG 453
>gi|148906440|gb|ABR16373.1| unknown [Picea sitchensis]
Length = 413
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%)
Query: 88 EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
E ++ + + E L+ +F +GE+ N+ L++DR KGY +E++ +A+ A
Sbjct: 99 ESVVLYIGNLSRNVNEAHLKEIFSNFGEVVNVELSMDRVVQLPKGYGYVEFKTRSDAEKA 158
Query: 148 ITAMNGGELLTQTLTVDWAF 167
+ MNGG++ ++ +
Sbjct: 159 LLHMNGGQVDGNVVSARFTL 178
>gi|434391462|ref|YP_007126409.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428263303|gb|AFZ29249.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 101
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E +DDL ++F EYG ++ + L DR TG +G+ +E E+ AI A+
Sbjct: 3 IYVGNLSFEVTQDDLSSIFAEYGTVKRVQLPTDRETGLPRGFGFVEMESEAAESTAIEAL 62
Query: 152 NGGELLTQTLTVD 164
+G E + +T+ V+
Sbjct: 63 DGAEWMGRTMKVN 75
>gi|403298766|ref|XP_003940178.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 597
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|393215302|gb|EJD00793.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 589
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 91 IILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITA 150
++ V V + ED L VF EYGE++++ L DR T +KGY +E+ + E A+ A
Sbjct: 421 VLFVGNVSFDMTEDGLWEVFAEYGEVKSVRLPTDRDTQRLKGYGYVEFVDVESAKKAFEG 480
Query: 151 MNGGELLTQTLTVDWA 166
G ++ +T+ +D+A
Sbjct: 481 ARGMDVGGRTIRLDYA 496
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 104 DDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNG 153
D L F + GE+ + + +DR TG +G+ +E+ E A NA A+NG
Sbjct: 335 DWLAQEFADCGEVVSARVQMDRNTGKSRGFGFVEFATAEGA-NAAVALNG 383
>gi|145341802|ref|XP_001415992.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576215|gb|ABO94284.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 86
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ + + +A E L++VFGE G +R L L DR TG +KGY +E++++ A +A+ +
Sbjct: 6 VFIGNIPYDATETSLRDVFGEVGPVRELRLVADRDTGKLKGYGFVEFDDYATAMSAVRNV 65
Query: 152 NGGELLTQTLTVDWA 166
NG E + L VD A
Sbjct: 66 NGREYNGRQLRVDHA 80
>gi|51258747|gb|AAH80037.1| Cstf-64-prov protein [Xenopus laevis]
Length = 498
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|14149675|ref|NP_056050.1| cleavage stimulation factor subunit 2 tau variant [Homo sapiens]
gi|71153234|sp|Q9H0L4.1|CSTFT_HUMAN RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant; AltName:
Full=TauCstF-64
gi|12053011|emb|CAB66681.1| hypothetical protein [Homo sapiens]
gi|24416591|gb|AAN05429.1| tCstF-64 [Homo sapiens]
gi|119574527|gb|EAW54142.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Homo sapiens]
gi|189067256|dbj|BAG36966.1| unnamed protein product [Homo sapiens]
Length = 616
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|297304342|ref|XP_001089558.2| PREDICTED: cleavage stimulation factor subunit 2-like [Macaca
mulatta]
gi|402910777|ref|XP_003918028.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3 [Papio
anubis]
gi|355704983|gb|EHH30908.1| hypothetical protein EGK_20728 [Macaca mulatta]
gi|355757534|gb|EHH61059.1| hypothetical protein EGM_18986 [Macaca fascicularis]
Length = 597
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|158340529|ref|YP_001521523.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158310770|gb|ABW32384.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 91
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E ++DL+ +F EYGE+ N+HL DR TG ++G+A ++ N + AI +
Sbjct: 3 IYVGNLSYEVAQEDLRAIFSEYGEVTNVHLPKDRETGKLRGFAFVDLGNDADEVKAIEDL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + ++L V+ A
Sbjct: 63 DGAEWMGRSLKVNKA 77
>gi|351715564|gb|EHB18483.1| Cleavage stimulation factor 64 kDa subunit, tau variant
[Heterocephalus glaber]
Length = 642
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|409993905|ref|ZP_11277031.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
gi|291569285|dbj|BAI91557.1| RNA-binding protein [Arthrospira platensis NIES-39]
gi|409935253|gb|EKN76791.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
Length = 103
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E EDDL VF EYG ++ + L DR TG ++G+ +E + E Q+AI A+
Sbjct: 3 IYVGNLSYEVTEDDLTAVFAEYGSVKRVKLPTDRETGRMRGFGFVEMDTEAEEQSAIDAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + L V+ A
Sbjct: 63 DGAEWCGRDLRVNKA 77
>gi|397469483|ref|XP_003806381.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
paniscus]
Length = 615
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|432111364|gb|ELK34639.1| Cleavage stimulation factor subunit 2 tau variant [Myotis davidii]
Length = 641
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|74007936|ref|XP_549135.2| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Canis
lupus familiaris]
Length = 597
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|332254744|ref|XP_003276492.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Nomascus leucogenys]
Length = 597
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|410043860|ref|XP_001163035.2| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Pan troglodytes]
gi|410335357|gb|JAA36625.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335359|gb|JAA36626.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335361|gb|JAA36627.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335363|gb|JAA36628.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
Length = 615
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|432881665|ref|XP_004073891.1| PREDICTED: transformer-2 protein homolog alpha-like [Oryzias
latipes]
Length = 268
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
GT P P + V G++ E DL+ VF YG + +++ D+RTG +G+A
Sbjct: 100 GTRENPDP-----STCLGVFGLNLSTTERDLREVFSRYGRLTGINMVHDQRTGRSRGFAF 154
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPST 173
I +E +A+ AI NG + + + VD++ + P T
Sbjct: 155 IYFERLCDAREAIEHTNGMNMDGRQIRVDYSITKRPHT 192
>gi|4098582|gb|AAD00328.1| RBM1 [Sminthopsis macroura]
Length = 390
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ + G++ E E L++VFG+YG I + L DR T +G+A I +E+ +A++A M
Sbjct: 10 LFIGGLNTETNEKGLESVFGKYGRIVEVLLMKDRETNKSRGFAFITFESPADAKDAARDM 69
Query: 152 NGGELLTQTLTVDWA 166
NG L +++ V+ A
Sbjct: 70 NGKSLDGKSIKVEQA 84
>gi|358377715|gb|EHK15398.1| hypothetical protein TRIVIDRAFT_38353 [Trichoderma virens Gv29-8]
Length = 324
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 65/148 (43%), Gaps = 20/148 (13%)
Query: 67 LADRNFESLGTDGGPGPQRSIE--------GWIILVTGVHEEAQEDDLQNVFGEYGEIRN 118
+ DR E+ + GP P+R E G + V +H + E+DL +F G I
Sbjct: 59 VHDRYEENTYRNRGPAPRRRRESPSGGEARGARLRVENIHYDLTEEDLDELFRRIGPITK 118
Query: 119 LHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKR 178
L L D R+G +G A + YE+ ++A A+ +G Q + + +GPS PF
Sbjct: 119 LQLRYD-RSGRSEGVAFVTYESKDDAAEAVRQFDGANANGQPIRL-TVMPSGPSRNPFDT 176
Query: 179 KNM----------RPGRTHRSRSPRRRY 196
M PG RS SP RRY
Sbjct: 177 AVMPGKPLSERISAPGGRSRSLSPPRRY 204
>gi|170044495|ref|XP_001849881.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167867621|gb|EDS31004.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 393
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
GW I + + E +E+ L +FG +G ++N+ + D T KGY + N+EEA AI
Sbjct: 311 GWSIFIYNLAPETEENTLWQLFGPFGAVQNVKIIKDSATNQCKGYGFVTMTNYEEAMLAI 370
Query: 149 TAMNGGELLTQTLTVDW 165
++NG L + L V +
Sbjct: 371 RSLNGYTLGQRVLQVSF 387
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 87 IEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQN 146
I+G + ++G+ + +++L+ +F YGEI + + KG I ++ +EA+
Sbjct: 160 IKGANLYISGLPKTITQEELEIIFRPYGEIITSRVLVQDGNDKPKGVGFIRFDQRKEAER 219
Query: 147 AITAMNGG--ELLTQTLTVDWAFSNGP 171
AI A+NG + LT +TV FSN P
Sbjct: 220 AIAALNGTTPKGLTDPITVK--FSNTP 244
Score = 35.8 bits (81), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/82 (21%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-------GFVKGYALIEYENFEEA 144
++V + + E++++++F GE+ ++ L D+ G GY + + ++A
Sbjct: 72 LIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDKNVIYPGQPKGQSLGYGFVNFHRSQDA 131
Query: 145 QNAITAMNGGELLTQTLTVDWA 166
+ A+ +NG L + L V +A
Sbjct: 132 EQAVNVLNGLRLQNKVLKVSFA 153
>gi|402593936|gb|EJW87863.1| hypothetical protein WUBG_01225 [Wuchereria bancrofti]
Length = 103
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G G R E + V VH A+ DDL+ +F + G +R++++ LD T +G+A +++
Sbjct: 3 GRRGSYRDDEIPTLYVRQVHYSARPDDLRALFEQMGPVRDVYIPLDYYTRESRGFAYVKF 62
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTG 174
E +A++A+ +NG +L + + V+WA ST
Sbjct: 63 EFTRDAEDALRELNGTSILGRRIEVEWAEGQRKSTA 98
>gi|355562595|gb|EHH19189.1| hypothetical protein EGK_19854 [Macaca mulatta]
Length = 610
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 8 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 67
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 68 NGREFSGRALRVDNAAS 84
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ + GV E L+ F +YGE+ + + +DR TG +G+ I Y + EEA +AI A+
Sbjct: 44 LFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQAL 103
Query: 152 NGGELLTQTLTVDWA 166
+G +L + + V++A
Sbjct: 104 DGQDLHGRPIRVNYA 118
>gi|172038249|ref|YP_001804750.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354554398|ref|ZP_08973703.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171699703|gb|ACB52684.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353554077|gb|EHC23468.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 97
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 49/80 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + + ++DL VF +YGE++ +H+ DR TG ++G+A +E + ++ + AI+ +
Sbjct: 3 IYVGNLSYDVTKEDLSEVFTDYGEVKRVHIPTDRDTGRMRGFAFVEMNSDDQEEQAISTL 62
Query: 152 NGGELLTQTLTVDWAFSNGP 171
+G E + +TL V+ A P
Sbjct: 63 DGAEWMGRTLKVNKAKERQP 82
>gi|395850633|ref|XP_003797884.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Otolemur garnettii]
Length = 596
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|167761793|ref|ZP_02433920.1| hypothetical protein BACSTE_00134 [Bacteroides stercoris ATCC
43183]
gi|167700299|gb|EDS16878.1| hypothetical protein BACSTE_00134 [Bacteroides stercoris ATCC
43183]
Length = 99
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I ++G+ DL N+F E+GE+ + + LDR TG +G+A +E N E Q AI +
Sbjct: 3 IYISGLSYGINNADLTNLFAEFGEVSSAKVILDRETGRSRGFAFVEMNNDTEGQKAIDEL 62
Query: 152 NGGELLTQTLTVDWAF------SNGPSTGPF 176
NG E ++ ++V A SNG S G +
Sbjct: 63 NGVEYDSKVISVSVARPREERPSNGSSRGGY 93
>gi|449541007|gb|EMD31994.1| hypothetical protein CERSUDRAFT_119299 [Ceriporiopsis subvermispora
B]
Length = 291
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ QE+DL+ +F +G + +++ DR TG KG+A + +E+ +AQ A+ M
Sbjct: 211 LRVTNISEDTQENDLRELFSRFGRVARVYVGRDRETGAGKGFAFVSFESKGDAQLAMEKM 270
Query: 152 NGGELLTQTLTVDWA 166
+G L+V W+
Sbjct: 271 HGRGYDNLILSVQWS 285
>gi|434399674|ref|YP_007133678.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428270771|gb|AFZ36712.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 94
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E + DL+ VF EYG ++ +HL DR TG +G+A +E E +AI+A+
Sbjct: 3 IYVGNLDYEISQQDLEEVFTEYGTVKRVHLPTDRETGRKRGFAFVEMGTEAEEASAISAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + ++L V+ A
Sbjct: 63 DGAEWMGRSLKVNQA 77
>gi|115449133|ref|NP_001048346.1| Os02g0788300 [Oryza sativa Japonica Group]
gi|47497761|dbj|BAD19861.1| putative initiation factor 3g [Oryza sativa Japonica Group]
gi|113537877|dbj|BAF10260.1| Os02g0788300 [Oryza sativa Japonica Group]
gi|125541408|gb|EAY87803.1| hypothetical protein OsI_09222 [Oryza sativa Indica Group]
gi|125583953|gb|EAZ24884.1| hypothetical protein OsJ_08662 [Oryza sativa Japonica Group]
Length = 289
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ +E+DL+ +FG +G + ++ LD RTG +G+ + + E+A+ AI +
Sbjct: 210 VRVTNLSEDTREEDLRELFGSFGPLTRAYVALDHRTGESRGFGFLSFVYREDAERAIAKL 269
Query: 152 NGGELLTQTLTVDWA 166
NG + L V+WA
Sbjct: 270 NGYGYDSLILNVEWA 284
>gi|390352150|ref|XP_791635.3| PREDICTED: RNA-binding motif protein, X-linked 2-like
[Strongylocentrotus purpuratus]
Length = 232
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%)
Query: 84 QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEE 143
Q+ + I + G+ E E D+ VF +YGEI N++L D++TG KGY I YE+
Sbjct: 56 QQYKDSAYIFIGGMPFELTEGDVLCVFSQYGEIVNINLVRDKKTGKSKGYCFIAYEDQRS 115
Query: 144 AQNAITAMNGGELLTQTLTVD 164
A+ NG +L +TL VD
Sbjct: 116 TILAVDNFNGIKLKGRTLRVD 136
>gi|355685803|gb|AER97853.1| ELAV-like protein 1 [Mustela putorius furo]
Length = 343
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 72 FESLGTDGGPG------PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDR 125
F +G D G P + GW I + + ++A E L +FG +G + N+ + D
Sbjct: 238 FSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDF 297
Query: 126 RTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDW 165
T KG+ + N+EEA AI ++NG L + L V +
Sbjct: 298 NTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSF 337
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ AI +
Sbjct: 40 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 99
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 100 NGLRLQSKTIKVSYA---RPSSEVIKDANL 126
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 126 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 185
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KN+ + SP RR+
Sbjct: 186 NGHKPPGSSEPITVKFA------ANPNQNKNVAL-LSQLYHSPARRF 225
>gi|426364779|ref|XP_004049473.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Gorilla gorilla gorilla]
gi|426364781|ref|XP_004049474.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Gorilla gorilla gorilla]
Length = 617
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|194205912|ref|XP_001917732.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Equus caballus]
Length = 619
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|192764312|gb|ACF05700.1| betaCstF-64 variant 3 [Mus musculus]
Length = 630
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|608537|gb|AAA96942.1| ribonucleoprotein [Xenopus laevis]
Length = 326
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
GW I V + ++A E L +FG +G + N+ + D T KG+ + N+EEA AI
Sbjct: 243 GWCIFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAI 302
Query: 149 TAMNGGELLTQTLTVDW 165
++NG L +TL V +
Sbjct: 303 ASLNGYRLGDKTLQVSF 319
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y N ++A+ AI +
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAINTL 81
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 82 NGLRLQSKTIKVSFA---RPSSESIKDANL 108
Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
SI+ + ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+
Sbjct: 102 SIKDANLYISGLPRTMTQKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAE 161
Query: 146 NAITAMNGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
AI + NG + ++ +TV +A P + KN+ + SP RR+
Sbjct: 162 EAIASFNGHKPPGSSEPITVKFA------ANPNQNKNVAL-LSQICHSPARRF 207
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ + GV E L+ F +YGE+ + + +DR TG +G+ I Y + EEA +AI A+
Sbjct: 44 LFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQAL 103
Query: 152 NGGELLTQTLTVDWA 166
+G +L + + V++A
Sbjct: 104 DGQDLHGRPIRVNYA 118
>gi|354470655|ref|XP_003497560.1| PREDICTED: RNA-binding protein 28 isoform 1 [Cricetulus griseus]
Length = 707
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + EDDL+ F YG + L +N+ R+ G ++G+A ++++N EA A+
Sbjct: 116 LIIRNLSFKCSEDDLKTAFTPYGTV--LEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKG 173
Query: 151 MNGGELLTQTLTVDWAFSN------GPSTGPFKRKNMRPGRTHR 188
MN E+ +T+ VDWA + P++ P KN+ R H+
Sbjct: 174 MNMKEIKGRTVAVDWAVAKDKYKDTQPASAP-DGKNVSSEREHK 216
Score = 35.8 bits (81), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 88 EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
EG + + + E++E+DL V ++G+++ + + L T KG ++ E AQ
Sbjct: 335 EGKTVFIRNLSFESEEEDLGEVLQQFGDLKYVRIVLHPDTEHSKGCGFAQFMTQEAAQKC 394
Query: 148 ITAMN------GGELLTQTLTVDWAFS 168
+ A + G +L + L +D A +
Sbjct: 395 LAAASPEAEGGGLKLDGRLLKIDLAVT 421
>gi|195657783|gb|ACG48359.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 254
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ +EAQ AI ++G ++ + + V +A
Sbjct: 65 KYADEAQKAIDRLDGRDVDGRNIMVQFA 92
>gi|440901693|gb|ELR52585.1| Cleavage stimulation factor subunit 2 [Bos grunniens mutus]
Length = 619
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|354464675|gb|AER26533.1| eukaryotic translation initiation factor 3G [Carica papaya]
Length = 297
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ +E DL +F +G + +++ +D++TG +G+ + + N E+AQ AI +
Sbjct: 218 VRVTNLSEDTREPDLLELFRTFGPVTRVYVAIDQKTGVSRGFGFVNFVNREDAQRAINKL 277
Query: 152 NGGELLTQTLTVDWA 166
NG L V+WA
Sbjct: 278 NGYGYDNLILRVEWA 292
>gi|345312831|ref|XP_001516462.2| PREDICTED: ELAV-like protein 1-like, partial [Ornithorhynchus
anatinus]
Length = 182
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 46 APKKTKGRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDD 105
+P + G +A R S + + L PG S GW I + + ++A E
Sbjct: 58 SPARRFGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASS--GWCIFIYNLGQDADEGI 115
Query: 106 LQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDW 165
L +FG +G + N+ + D T KG+ + N+EEA AI ++NG L + L V +
Sbjct: 116 LWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSF 175
>gi|307591599|ref|YP_003900398.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306986453|gb|ADN18332.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 109
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E ++ L VF +YG++ +H+ DR TG +G+A +E E E AI+A+
Sbjct: 3 IYVGNLAFEVEDKHLSEVFSDYGKVTRVHIPTDRETGQRRGFAFVEMETAEMEDAAISAL 62
Query: 152 NGGELLTQTLTVDWAFS----NGPSTGPFKRKNMRPGRTHRSRSPR 193
+G E + + L V+ A N G ++R N GR + R+ R
Sbjct: 63 DGAEWMERELKVNKAREREDRNSGGGGNYRRNNNSGGRGNARRNDR 108
>gi|281348298|gb|EFB23882.1| hypothetical protein PANDA_020101 [Ailuropoda melanoleuca]
Length = 612
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|449442606|ref|XP_004139072.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
gi|449528235|ref|XP_004171111.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
Length = 285
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+LV + + + +DL+ FG++G I++++L D TG +G+ ++Y + +A +A M
Sbjct: 38 LLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHM 97
Query: 152 NGGELLTQTLTVDWAFSN 169
+G LL + LTV +A N
Sbjct: 98 DGCVLLGRELTVVFAEEN 115
>gi|395850631|ref|XP_003797883.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Otolemur garnettii]
Length = 576
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|344241215|gb|EGV97318.1| Cleavage stimulation factor 64 kDa subunit, tau variant [Cricetulus
griseus]
Length = 645
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|340369320|ref|XP_003383196.1| PREDICTED: hypothetical protein LOC100639137 [Amphimedon
queenslandica]
Length = 295
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 75 LGTDGGPG-PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGY 133
LG +GG Q+ I + G+ + E D+ +VF +YGEI N++L D++TG KG+
Sbjct: 14 LGIEGGASWHQQYATSAYIFIGGLDYDLTEGDVLSVFSQYGEIVNINLVRDKKTGKSKGF 73
Query: 134 ALIEYENFEEAQNAITAMNGGELLTQTLTVD 164
I YE+ A+ NG +L +++ VD
Sbjct: 74 CFIGYEDQRSTILAVDNFNGIKLCGRSIRVD 104
>gi|297686917|ref|XP_002820977.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pongo
abelii]
Length = 625
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|402864714|ref|XP_003896596.1| PREDICTED: RNA-binding protein 28 isoform 1 [Papio anubis]
Length = 762
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + E+DL+ VF ++G I L +N+ R+ G ++G+A ++++N EA A+
Sbjct: 116 LIIRNLSFKCSEEDLKTVFAQFGAI--LEVNIPRKPDGKMRGFAFVQFKNLLEAGKALRG 173
Query: 151 MNGGELLTQTLTVDWAFSN 169
MN E+ +T+ VDWA +
Sbjct: 174 MNMKEIKGRTVAVDWAVAK 192
>gi|192764316|gb|ACF05702.1| betaCstF-64 variant 1 [Mus musculus]
Length = 604
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|434389333|ref|YP_007099944.1| RRM domain-containing RNA-binding protein [Chamaesiphon minutus PCC
6605]
gi|428020323|gb|AFY96417.1| RRM domain-containing RNA-binding protein [Chamaesiphon minutus PCC
6605]
Length = 93
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E +DDL F EYG+++ + L DR TG ++G+A +E E E AI A+
Sbjct: 3 IYVGNLSYEVTQDDLTQTFAEYGKVKRVQLPTDRETGRLRGFAFVEMETDAEESAAIEAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + + L V+ A
Sbjct: 63 DGAEWMGRDLKVNKA 77
>gi|328700229|ref|XP_003241188.1| PREDICTED: ELAV-like protein 4-like isoform 2 [Acyrthosiphon pisum]
Length = 392
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Query: 62 ERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHL 121
+R+S LA + L PG + GW I V + E +E+ L +FG +G ++++ +
Sbjct: 269 QRYSPLAG---DLLANSMLPGNSMNGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKV 325
Query: 122 NLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
D +T KG+ + N++EA AI ++NG L + L V + + G
Sbjct: 326 IRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNKG 374
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +++++++F GE+ + L D+ TG GY + Y E+A+ AI +
Sbjct: 38 LIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVTGQSLGYGFVNYHRPEDAEKAINTL 97
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L +T+ V +A PS+ K N+
Sbjct: 98 NGLRLQNKTIKVSFA---RPSSEAIKGANL 124
Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT--GFV--------KGYAL 135
+I+G + V+G+ + + DL+N+F YG I + D T FV
Sbjct: 118 AIKGANLYVSGLPKHMTQQDLENLFSPYGRIITSRILCDNMTVRQFVGNTGGDHSPCVGF 177
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPST 173
I ++ EA+ AI +NG T ++ F+N PS+
Sbjct: 178 IRFDQRIEAERAIQELNGTVPKGSTESITVKFANNPSS 215
>gi|403260042|ref|XP_003922497.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Saimiri boliviensis boliviensis]
Length = 621
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|294868078|ref|XP_002765370.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239865389|gb|EEQ98087.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 204
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 90 WIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAIT 149
+ I V G+ E ++DDL+ F ++GEI ++ + LDR TG +G+ + + +A++AI
Sbjct: 10 FSIKVDGIDERVRKDDLREAFSKFGEIGDVFIPLDRYTGVSRGFGFVRFYERRDAEDAIR 69
Query: 150 AMNGGELLTQTLTVDWAFSNGPST 173
M+ E +TV A N S+
Sbjct: 70 DMDNKEFQGCRITVAAAMYNKESS 93
>gi|91094479|ref|XP_970762.1| PREDICTED: similar to cleavage stimulation factor 64-kDa subunit
[Tribolium castaneum]
Length = 424
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++FGE G++ + L DR TG KGY EY + E A +A+ +
Sbjct: 16 VFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFCEYRDQETALSAMRNL 75
Query: 152 NGGELLTQTLTVDWAFS 168
NG E+ + L VD A +
Sbjct: 76 NGYEIGGRNLRVDNACT 92
>gi|443691962|gb|ELT93683.1| hypothetical protein CAPTEDRAFT_160910 [Capitella teleta]
Length = 291
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
R E I VT + E+ +E DLQ +F +G I ++L D+ TG KG+A I + E+A
Sbjct: 203 RKDESATIRVTNLSEDTREADLQELFKPFGNISRIYLAKDKVTGQSKGFAFINFHRREDA 262
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNG 170
AI ++G L V+WA +G
Sbjct: 263 ARAIQGISGFGYDHLILNVEWAKPSG 288
>gi|348522786|ref|XP_003448905.1| PREDICTED: transformer-2 protein homolog alpha-like [Oreochromis
niloticus]
Length = 279
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 91 IILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITA 150
+ V G+ E DL+ VF YG + +++ D+RTG +G+A + +E E+++ A+
Sbjct: 120 CLGVFGLSLYTTERDLREVFSRYGPLAGVNVVYDQRTGRSRGFAFVYFERLEDSKEAMER 179
Query: 151 MNGGELLTQTLTVDWAFSNGPST 173
NG EL + + VD++ + P T
Sbjct: 180 ANGMELDGRRIRVDYSITKRPHT 202
>gi|344296752|ref|XP_003420068.1| PREDICTED: cleavage stimulation factor subunit 2-like [Loxodonta
africana]
Length = 582
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|403419677|emb|CCM06377.1| predicted protein [Fibroporia radiculosa]
Length = 582
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%)
Query: 91 IILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITA 150
++ V + A ED L F EYG+++++ + DR TG KG+A +E+ + E A++A
Sbjct: 415 VLFVGNLSFSATEDLLWETFSEYGDVKSVRVPTDRETGSPKGFAYVEFSDVETAKSAYEG 474
Query: 151 MNGGELLTQTLTVDWA 166
++G E+ + + +D++
Sbjct: 475 VSGKEIAGRAVRLDYS 490
>gi|344276873|ref|XP_003410230.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Loxodonta
africana]
Length = 303
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 64 HSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNL 123
HS +A+ ++ S D WI L G+ E E D+ VF +YGEI N++L
Sbjct: 20 HSVVAEASWHSQYKDSS---------WIFL-GGLPYELTEGDILCVFSQYGEIVNINLVR 69
Query: 124 DRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGP 171
+R+TG KG+ I YE+ A+ NG ++ +T+ VD S P
Sbjct: 70 NRKTGKSKGFCFICYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSSYRP 117
>gi|344247291|gb|EGW03395.1| ELAV-like protein 1 [Cricetulus griseus]
Length = 335
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 239 GISGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 298
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 299 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 328
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 100 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 159
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KNM + SP RR+
Sbjct: 160 NGHKPPGSSEPITVKFA------ANPNQNKNMAL-LSQLYHSPARRF 199
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +++L+++F GE+ + L D+ G GY + Y ++A+ AI+ +
Sbjct: 14 LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTL 73
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 74 NGLRLQSKTIKVSYA---RPSSEVIKDANL 100
>gi|331219745|ref|XP_003322549.1| hypothetical protein PGTG_04086 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 680
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 13/110 (11%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ +T + + QEDDL+ +F ++GEI+ + + LD + G KG+A +E++N A+ A++ M
Sbjct: 414 LYITCLSKYVQEDDLRKLFSQFGEIKGVRVVLD-QAGHSKGFAFVEFQNEMSAKAALS-M 471
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKN--------MRPGRTHRSRSPR 193
N EL + + V + + G S RKN + HRSRS R
Sbjct: 472 NNVELKKRRIGVTISSAKGLS---LARKNTTFKDETKLSSATDHRSRSVR 518
>gi|26344670|dbj|BAC35984.1| unnamed protein product [Mus musculus]
Length = 326
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 230 GISGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 289
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 290 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 319
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KNM + SP RR+
Sbjct: 168 NGHKPPGSSEPITVKFA------ANPNQNKNMAL-LSQLYHSPARRF 207
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +++L+++F GE+ + L D+ G GY + Y ++A+ AI+ +
Sbjct: 22 LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTL 81
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 82 NGLRLQSKTIKVSYA---RPSSEVIKDANL 108
>gi|410056965|ref|XP_003954131.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2, partial [Pan troglodytes]
Length = 323
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 88 EGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNA 147
E W L+ G+ E E D+ VF +YGEI N++L D++TG KG+ + YE+ A
Sbjct: 6 ETWFSLLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILA 65
Query: 148 ITAMNGGELLTQTLTVD 164
+ NG ++ +T+ VD
Sbjct: 66 VDNFNGIKIKGRTIRVD 82
>gi|403413086|emb|CCL99786.1| predicted protein [Fibroporia radiculosa]
Length = 290
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ QE+DL+++FG +G + +++ DR TG KG+A + +E+ AQ A+ +
Sbjct: 210 LRVTNISEDTQENDLRDLFGAFGRVARVYVGRDRETGAGKGFAFVSFEDRGVAQRAMDKL 269
Query: 152 NGGELLTQTLTVDWA 166
+G L + W+
Sbjct: 270 HGRGYDNLILNIQWS 284
>gi|333377706|ref|ZP_08469439.1| hypothetical protein HMPREF9456_01034 [Dysgonomonas mossii DSM
22836]
gi|332883726|gb|EGK04006.1| hypothetical protein HMPREF9456_01034 [Dysgonomonas mossii DSM
22836]
Length = 106
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I + G+ ++DL+++F EYGEI + + +D+ TG KGY +E E+ Q AI +
Sbjct: 3 IFIAGLSYSINDNDLRDLFNEYGEISSAKVIMDKATGRSKGYGFVELEDNAAGQKAIEEL 62
Query: 152 NGGELLTQTLTVDWA 166
NG E +T++V A
Sbjct: 63 NGAEYDGRTISVSEA 77
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%)
Query: 103 EDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLT 162
ED+++ F +YG++ ++ DR TG KG+ +EY + E AQ A+ +NG E+ ++L
Sbjct: 294 EDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEYGDVETAQKAVEGLNGVEIAGRSLR 353
Query: 163 VDWA 166
+D+A
Sbjct: 354 LDYA 357
>gi|452820290|gb|EME27334.1| RNA-binding protein [Galdieria sulphuraria]
Length = 596
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V +H EDDL+ +F +GE+ +L L+ D TG +G+ ++Y+N E+A+ A +
Sbjct: 308 LYVGSIHFSISEDDLRTIFEPFGEVISLQLHKDPETGRSRGFGFVQYKNHEDAKKAFEQL 367
Query: 152 NGGELLTQTLTVDWA 166
NG +L + L V A
Sbjct: 368 NGLDLAGRPLKVGLA 382
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + ++ E D+ N F G++R++ + +D+R+G KG A +E+ ++EA + +
Sbjct: 188 IFVWQLAQKVTEKDVYNFFSAAGKVRDIRMIIDKRSGRHKGAAYVEF-YYKEAIPSAMRL 246
Query: 152 NGGELL 157
G +L
Sbjct: 247 AGQQLC 252
>gi|393215896|gb|EJD01387.1| hypothetical protein FOMMEDRAFT_158528 [Fomitiporia mediterranea
MF3/22]
Length = 361
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I + G+H + E D+ +F +YGE+ +++L D+ TG KG+ + YE+ A+ +
Sbjct: 34 IFIGGLHFDLTEGDVITIFSQYGEVMDVNLPRDKETGKTKGFGFLMYEDQRSTILAVDNL 93
Query: 152 NGGELLTQTLTVD 164
NG ++L +TL VD
Sbjct: 94 NGAKVLERTLRVD 106
>gi|302696573|ref|XP_003037965.1| hypothetical protein SCHCODRAFT_63222 [Schizophyllum commune H4-8]
gi|300111662|gb|EFJ03063.1| hypothetical protein SCHCODRAFT_63222 [Schizophyllum commune H4-8]
Length = 309
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 65 SRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLD 124
+R+ +R E LG G + I V G++ E E D+ +F +YGEI ++++ +
Sbjct: 8 NRINERELE-LGLSGASWHDEYKDSAYIFVGGLNRELTEGDVITIFSQYGEIMDINMPRE 66
Query: 125 RRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVD 164
+ TG KG+A + YE+ A+ +NG ++ +TL VD
Sbjct: 67 KETGKPKGFAFVMYEDQRSTVLAVDNLNGSKVAERTLRVD 106
>gi|428200576|ref|YP_007079165.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427978008|gb|AFY75608.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 93
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + +A ++DL+ +F EYG ++ + L LDR TG ++G+A ++ + ++ + AI +
Sbjct: 3 IFVGNISHQAAKEDLEEIFAEYGIVKKVVLPLDRETGRMRGFAFVDLSSEDQEEQAIRDL 62
Query: 152 NGGELLTQTLTVDWA--FSNGPSTGPFK 177
+G EL+ + L V+ A + P+ G ++
Sbjct: 63 DGTELMGRQLRVNKARPREDNPNRGSYR 90
>gi|31542602|ref|NP_034615.2| ELAV-like protein 1 [Mus musculus]
gi|157818153|ref|NP_001102318.1| ELAV-like protein 1 [Rattus norvegicus]
gi|354488231|ref|XP_003506274.1| PREDICTED: ELAV-like protein 1 [Cricetulus griseus]
gi|341940489|sp|P70372.2|ELAV1_MOUSE RecName: Full=ELAV-like protein 1; AltName: Full=Elav-like generic
protein; AltName: Full=Hu-antigen R; Short=HuR; AltName:
Full=MelG
gi|26348505|dbj|BAC37892.1| unnamed protein product [Mus musculus]
gi|83308037|emb|CAI77902.1| HuR RNA binding protein [Spalax judaei]
gi|148690049|gb|EDL21996.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Mus musculus]
gi|148690050|gb|EDL21997.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Mus musculus]
gi|149015619|gb|EDL75000.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149015620|gb|EDL75001.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|197245826|gb|AAI68972.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Rattus norvegicus]
gi|208609536|dbj|BAG72208.1| HuR [Rattus norvegicus]
Length = 326
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 230 GISGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 289
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 290 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 319
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KNM + SP RR+
Sbjct: 168 NGHKPPGSSEPITVKFA------ANPNQNKNMAL-LSQLYHSPARRF 207
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +++L+++F GE+ + L D+ G GY + Y ++A+ AI+ +
Sbjct: 22 LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTL 81
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 82 NGLRLQSKTIKVSYA---RPSSEVIKDANL 108
>gi|59802525|gb|AAX07506.1| unknown [Gemmata sp. Wa1-1]
Length = 163
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 56 REEADSERHSRLADRNFESLGTDGGP-GPQRS-IEGWIILVTGVHEEAQEDDLQNVFGEY 113
R S RH L S+ +D GP GP R G + V + ++ L+ +FG Y
Sbjct: 33 RPAVRSRRHEALG-----SVPSDSGPLGPARCETVGKKLYVGNLGYGVTDEQLRGMFGPY 87
Query: 114 GEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWA 166
G ++ + +DR TG KG+ +E + +EAQ AI MNG + LTV+ A
Sbjct: 88 GSVQTAQVIMDRDTGRSKGFGFVEMNSDQEAQAAIAGMNGQMSEGRALTVNEA 140
>gi|344270020|ref|XP_003406844.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Loxodonta africana]
Length = 477
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ G+H E E L+ VFG+YG I + L DR T +G+A + +E+ +A++A M
Sbjct: 96 LFTGGLHTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESSADAKDAARDM 155
Query: 152 NGGELLTQTLTVDWA 166
NG L + + V+ A
Sbjct: 156 NGKSLDGKAIKVEQA 170
>gi|305855162|ref|NP_001182263.1| ELAV-like protein 1 [Sus scrofa]
gi|285818484|gb|ADC38915.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 [Sus
scrofa]
gi|456753432|gb|JAA74168.1| ELAV-like 1 (Hu antigen R) [Sus scrofa]
Length = 326
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 230 GLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 289
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 290 VTMTNYEEASMAIASLNGYRLGDKILQVSF 319
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +++L+++F GEI + L D+ G GY + Y ++A+ AI +
Sbjct: 22 LIVNYLPQNMTQEELRSLFSSIGEIESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 82 NGLRLQSKTIKVSYA---RPSSEVIKDANL 108
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 108 LYISGLPRTMTQKDVEDMFSPFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KN+ + SP RR+
Sbjct: 168 NGHKPPGSSEPITVKFA------ANPNQNKNVAL-LSQLYHSPARRF 207
>gi|26354232|dbj|BAC40744.1| unnamed protein product [Mus musculus]
Length = 305
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 209 GISGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 268
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 269 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 298
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 87 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 146
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KNM + SP RR+
Sbjct: 147 NGHKPPGSSEPITVKFA------ANPNQNKNMAL-LSQLYHSPARRF 186
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +++L+++F GE+ + L D+ G GY + Y ++A+ AI+ +
Sbjct: 1 LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTL 60
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 61 NGLRLQSKTIKVSYA---RPSSEVIKDANL 87
>gi|74138233|dbj|BAE28602.1| unnamed protein product [Mus musculus]
Length = 326
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 230 GISGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 289
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 290 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 319
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KNM + SP RR+
Sbjct: 168 NGHKPPGSSEPITVKFA------ANPNQNKNMAL-LSQLYHSPARRF 207
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +++L+++F GE+ + L D+ G GY + Y ++A+ AI+ +
Sbjct: 22 LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTL 81
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 82 NGLRLQSKTIKVSYAH---PSSEVIKDANL 108
>gi|393218616|gb|EJD04104.1| splicing factor, CC1-like protein [Fomitiporia mediterranea MF3/22]
Length = 464
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%)
Query: 83 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFE 142
P S G + V +H E D++ VF +GE+ + L+ D TG KGYA I Y+ E
Sbjct: 231 PGASGRGATLYVGSLHFNLTESDIKQVFEPFGELDFVDLHKDSATGRSKGYAFIHYKRAE 290
Query: 143 EAQNAITAMNGGELLTQTLTVDWAFSNG 170
+A+ A+ M G EL +TL V+ G
Sbjct: 291 DAKMALEQMEGFELAGRTLRVNTVHEKG 318
>gi|443732260|gb|ELU17052.1| hypothetical protein CAPTEDRAFT_226396 [Capitella teleta]
Length = 276
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%)
Query: 85 RSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEA 144
R E I VT + E+ +E DLQ +F +G I ++L D+ TG KG+A I + E+A
Sbjct: 188 RKDESATIRVTNLSEDTREADLQELFKPFGNISRIYLAKDKVTGQSKGFAFINFHRREDA 247
Query: 145 QNAITAMNGGELLTQTLTVDWAFSNG 170
AI ++G L V+WA +G
Sbjct: 248 ARAIQGISGFGYDHLILNVEWAKPSG 273
>gi|356567603|ref|XP_003552007.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-like [Glycine max]
Length = 290
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ +E DL +F +G + +++ +D++TG +G+ + + N E+AQ AI +
Sbjct: 211 VRVTNLSEDTREPDLLELFRPFGPVSRVYVAIDQKTGMSRGFGFVNFVNREDAQRAINKL 270
Query: 152 NGGELLTQTLTVDWA 166
NG L V+WA
Sbjct: 271 NGYGYDNLILRVEWA 285
>gi|319902685|ref|YP_004162413.1| RNP-1 like RNA-binding protein [Bacteroides helcogenes P 36-108]
gi|319417716|gb|ADV44827.1| RNP-1 like RNA-binding protein [Bacteroides helcogenes P 36-108]
Length = 102
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I + G++ + DL ++F EYGE+ + + DR TG +G+A +E + E AQ AI +
Sbjct: 3 IYIAGLNFSTTDADLNDLFSEYGEVSSARVITDRETGRSRGFAFVEMPDDEAAQKAIDEL 62
Query: 152 NGGELLTQTLTVDWA 166
NG E +T++V+ A
Sbjct: 63 NGAEYDNKTISVNVA 77
>gi|312380126|gb|EFR26210.1| hypothetical protein AND_07855 [Anopheles darlingi]
Length = 388
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
GW I + + E +E+ L +FG +G ++N+ + D T KGY + N+EEA AI
Sbjct: 306 GWSIFIYNLAPETEENTLWQLFGPFGAVQNVKVIKDAATNQCKGYGFVTMTNYEEAMLAI 365
Query: 149 TAMNGGELLTQTLTVDW 165
++NG L + L V +
Sbjct: 366 RSLNGYTLGQRVLQVSF 382
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-------GFVKGYALIEYENFEEA 144
++V + + E++++++F GE+ ++ L D+ G GY + Y ++A
Sbjct: 80 LIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDKNVIYPGQPKGQSLGYGFVNYHRPQDA 139
Query: 145 QNAITAMNGGELLTQTLTVDWA 166
+ A+ +NG L + L V +A
Sbjct: 140 EQAVNVLNGLRLQNKVLKVSFA 161
>gi|449267951|gb|EMC78842.1| Heterogeneous nuclear ribonucleoprotein G [Columba livia]
Length = 385
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ + G++ E E L+ VFG+YG I + L DR T +G+A + +E+ +AQ+A M
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAQDAARDM 69
Query: 152 NGGELLTQTLTVDWA 166
NG L + + V+ A
Sbjct: 70 NGKSLDGKAIKVEQA 84
>gi|427719544|ref|YP_007067538.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427351980|gb|AFY34704.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 101
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + + +E+DL+ VF EYG ++ + L +DR TG V+G+ +E E E AI A+
Sbjct: 3 IYVGNLSYQVREEDLKQVFSEYGTVKTVQLPVDRETGRVRGFGFVEMETEAEETKAIEAL 62
Query: 152 NGGELLTQTLTVDWA 166
+ E + ++L V+ A
Sbjct: 63 DNAEWMGRSLKVNKA 77
>gi|41055454|ref|NP_956710.1| transformer-2 protein homolog alpha [Danio rerio]
gi|32451924|gb|AAH54632.1| Transformer-2 alpha [Danio rerio]
Length = 297
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%)
Query: 91 IILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITA 150
+ V G+ E DL+ VF YG + +++ D+RTG +G+A + +E+ ++A+ A+
Sbjct: 136 CLGVFGLSLYTTERDLREVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFEHIDDAKEAMER 195
Query: 151 MNGGELLTQTLTVDWAFSNGPST 173
NG EL + + VD++ + P T
Sbjct: 196 ANGMELDGRRIRVDYSITKRPHT 218
>gi|432119731|gb|ELK38615.1| ELAV-like protein 1 [Myotis davidii]
Length = 296
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 200 GLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 259
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 260 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 289
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 103 EDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLT 162
+D+L+++F GE+ + L D+ G GY + Y ++A+ AI +NG L ++T+
Sbjct: 3 QDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAEKAINTLNGLRLQSKTIK 62
Query: 163 VDWAFSNGPSTGPFKRKNM 181
V +A PS+ K N+
Sbjct: 63 VSYA---RPSSEVIKDANL 78
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 78 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 137
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KN+ + SP RR+
Sbjct: 138 NGHKPPGSSEPITVKFA------ANPNQNKNVAL-LSQLYHSPARRF 177
>gi|281354415|gb|EFB29999.1| hypothetical protein PANDA_019778 [Ailuropoda melanoleuca]
Length = 568
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 93 LVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMN 152
+V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +N
Sbjct: 5 IVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLN 64
Query: 153 GGELLTQTLTVDWAFS 168
G E + L VD A S
Sbjct: 65 GREFSGRALRVDNAAS 80
>gi|417409800|gb|JAA51391.1| Putative rna-binding protein elav/hu rrm superfamily, partial
[Desmodus rotundus]
Length = 336
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 240 GLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 299
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 300 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 329
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 118 LYISGLPRNMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 177
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KNM + SP RR+
Sbjct: 178 NGHKPPGSSEPITVKFA------ANPNQNKNMAL-LSQLYHSPARRF 217
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ A+ +
Sbjct: 32 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAVNTL 91
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 92 NGLRLQSKTIKVSYA---RPSSEVIKDANL 118
>gi|326934269|ref|XP_003213214.1| PREDICTED: ELAV-like protein 1-like [Meleagris gallopavo]
Length = 298
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 72 FESLGTDGGPG------PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDR 125
F +G D G P + GW I + + ++A E L +FG +G + N+ + D
Sbjct: 192 FSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDF 251
Query: 126 RTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDW 165
T KG+ + N+EEA AI ++NG L + L V +
Sbjct: 252 NTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSF 291
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT
Sbjct: 80 LYISGLPRSMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITNF 139
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KN+ + SP RR+
Sbjct: 140 NGHKPPGSSEPITVKFA------ANPNQNKNVAL-LSQLCHSPARRF 179
>gi|332852452|ref|XP_001156587.2| PREDICTED: ELAV-like protein 1 isoform 1 [Pan troglodytes]
gi|397477357|ref|XP_003810039.1| PREDICTED: ELAV-like protein 1 [Pan paniscus]
gi|426386983|ref|XP_004059958.1| PREDICTED: ELAV-like protein 1 isoform 2 [Gorilla gorilla gorilla]
gi|194375035|dbj|BAG62630.1| unnamed protein product [Homo sapiens]
Length = 353
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 257 GLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 316
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 317 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 346
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ AI +
Sbjct: 49 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 108
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 109 NGLRLQSKTIKVSYA---RPSSEVIKDANL 135
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 135 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 194
Query: 152 NG 153
NG
Sbjct: 195 NG 196
>gi|45382283|ref|NP_990164.1| ELAV-like protein 1 [Gallus gallus]
gi|5738249|gb|AAD50313.1|AF176673_1 RNA-binding protein HuA [Gallus gallus]
Length = 326
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 230 GLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 289
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 290 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 319
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ AI +
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPR 193
NG L ++T+ V +A PS+ K N+ RS + +
Sbjct: 82 NGLRLQSKTIKVSYA---RPSSEVIKDANLYISGLPRSMTQK 120
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D+ ++F +G I N + +D+ TG +G A I ++ EA+ AIT
Sbjct: 108 LYISGLPRSMTQKDVVDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITNF 167
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KN+ + SP RR+
Sbjct: 168 NGHKPPGSSEPITVKFA------ANPNQNKNVAL-LSQLCHSPARRF 207
>gi|351705745|gb|EHB08664.1| RNA-binding protein 28 [Heterocephalus glaber]
Length = 758
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + EDDL+ VF ++G + L +N+ R+ G ++G+A ++++N EA A+
Sbjct: 116 LIIRNLSFKCSEDDLKTVFSQFGAV--LEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKG 173
Query: 151 MNGGELLTQTLTVDWAFSN 169
MN ++ +T+ VDWA +
Sbjct: 174 MNMKDIKGRTVAVDWAVAK 192
>gi|449461647|ref|XP_004148553.1| PREDICTED: RNA-binding protein 28-like [Cucumis sativus]
Length = 966
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
GG G + + W ++V + +A+E +++N F G + ++ + + TG KG+A +++
Sbjct: 286 GGEGSK--TQKWKVIVRNLPFKAKEKEIKNTFSSAGFVWDVMMPQNSDTGLSKGFAFVKF 343
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWAF------SNGPSTGPF 176
++A++AI NG + +T+ VDWA S G +T P
Sbjct: 344 TCKQDAESAIQKFNGKKFGQRTIAVDWAVPKKIYSSGGGATAPV 387
>gi|410927616|ref|XP_003977237.1| PREDICTED: cleavage stimulation factor subunit 2-like [Takifugu
rubripes]
Length = 497
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 90
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 91 NGREFSGRALRVDNAAS 107
>gi|345493621|ref|XP_003427111.1| PREDICTED: ELAV-like protein 3-like isoform 3 [Nasonia vitripennis]
gi|345493623|ref|XP_001603257.2| PREDICTED: ELAV-like protein 3-like isoform 1 [Nasonia vitripennis]
Length = 349
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 63 RHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLN 122
R+S LA + L PG + GW I V + E +E+ L +FG +G ++++ +
Sbjct: 242 RYSPLAG---DLLANSMLPGNAMNGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVI 298
Query: 123 LDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDW 165
D +T KG+ + N+EEA AI ++NG L + L V +
Sbjct: 299 RDLQTNKCKGFGFVTMTNYEEAVVAIQSLNGYTLGNRVLQVSF 341
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +++++++F GE+ + L D+ TG GY + Y E+A+ AI +
Sbjct: 30 LIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKLTGQSLGYGFVNYHRPEDAEKAINTL 89
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L +T+ V +A PS+ K N+
Sbjct: 90 NGLRLQNKTIKVSYA---RPSSEAIKGANL 116
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 16/124 (12%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-------------GFVKG 132
+I+G + V+G+ + + DL+N+F YG I + D T G KG
Sbjct: 110 AIKGANLYVSGLPKNMTQQDLENLFSPYGRIITSRILCDNITVRQFVTGGGDNLPGLSKG 169
Query: 133 YALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSP 192
I ++ EA+ AI +NG T + F+N PS K + P + +
Sbjct: 170 VGFIRFDQRVEAERAIQELNGTIPKGSTEPITVKFANNPSN---NNKAIPPLAAYLTPQA 226
Query: 193 RRRY 196
RR+
Sbjct: 227 TRRF 230
>gi|297275993|ref|XP_001092907.2| PREDICTED: ELAV-like protein 1 isoform 4 [Macaca mulatta]
Length = 387
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 291 GLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 350
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 351 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 380
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ AI +
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 82 NGLRLQSKTIKVSYA---RPSSEVIKDANL 108
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 152 NG 153
NG
Sbjct: 168 NG 169
>gi|444518829|gb|ELV12414.1| Cleavage stimulation factor subunit 2 [Tupaia chinensis]
Length = 409
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|1022961|gb|AAB41913.1| HuR RNA binding protein [Homo sapiens]
Length = 326
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 230 GLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 289
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 290 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 319
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ AI +
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 82 NGLRLQSKTIKVSYA---RPSSEVIKDANL 108
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 152 NG 153
NG
Sbjct: 168 NG 169
>gi|225706444|gb|ACO09068.1| ELAV-like protein 1 [Osmerus mordax]
Length = 374
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 250 GMSGVSVPSSASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 309
Query: 136 IEYENFEEAQNAITAMNG---GELLTQT 160
+ N+EEA AI ++NG G+ + QT
Sbjct: 310 VTMTNYEEAAMAIASLNGYRLGDKILQT 337
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y N +A+ AI+ +
Sbjct: 37 LIVNYLPQSMTQDELRSLFCSIGEVESAKLIRDKVAGHSLGYGFVNYLNPSDAERAISTL 96
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 97 NGLRLQSKTIKVSYA---RPSSDTIKDANL 123
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTG-----FVKGYALIEYENFEEAQN 146
+ ++G+ + + D++++F YG I N + +D+ +G +G A I ++ EA++
Sbjct: 123 LYISGLPKTMTQKDVEDMFARYGRIINSRVLVDQASGGAGDGLSRGVAFIRFDKRAEAED 182
Query: 147 AITAMNGGEL--LTQTLTVDWAFS 168
AI +NG + ++ +TV +A S
Sbjct: 183 AIKDLNGQKPPGASEAITVKFAAS 206
>gi|224087249|ref|XP_002190976.1| PREDICTED: ELAV-like protein 1-like [Taeniopygia guttata]
gi|449266784|gb|EMC77794.1| ELAV-like protein 1 [Columba livia]
Length = 326
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 230 GLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 289
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 290 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 319
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ AI +
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPR 193
NG L ++T+ V +A PS+ K N+ RS + +
Sbjct: 82 NGLRLQSKTIKVSYA---RPSSEVIKDANLYISGLPRSMTQK 120
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT
Sbjct: 108 LYISGLPRSMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITNF 167
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KN+ + SP RR+
Sbjct: 168 NGHKPPGSSEPITVKFA------ANPNQNKNVAL-LSQLCHSPARRF 207
>gi|57530169|ref|NP_001006433.1| cleavage stimulation factor subunit 2 [Gallus gallus]
gi|53128673|emb|CAG31323.1| hypothetical protein RCJMB04_5b8 [Gallus gallus]
Length = 475
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|351701320|gb|EHB04239.1| ELAV-like protein 1, partial [Heterocephalus glaber]
Length = 329
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 233 GLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 292
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 293 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 322
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ AI +
Sbjct: 25 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 84
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 85 NGLRLQSKTIKVSYA---RPSSEVIKDANL 111
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 111 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 170
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KN+ + SP RR+
Sbjct: 171 NGHKPPGSSEPITVKFA------ANPNQNKNVAL-LSQLYHSPARRF 210
>gi|297722159|ref|NP_001173443.1| Os03g0374575 [Oryza sativa Japonica Group]
gi|255674538|dbj|BAH92171.1| Os03g0374575 [Oryza sativa Japonica Group]
Length = 251
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+LV + + + DDL+ FG++G +++++L D TG +G+ I+Y + E+A +A M
Sbjct: 46 LLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKYHM 105
Query: 152 NGGELLTQTLTVDWAFSN 169
+G LL + +TV +A N
Sbjct: 106 DGQILLGREVTVVFAEEN 123
>gi|26330019|dbj|BAC28748.1| unnamed protein product [Mus musculus]
Length = 326
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 230 GISGVNVPGNASSGWCIFIYNLGQDADEGILWRMFGPFGAVTNVKVIRDFNTNKCKGFGF 289
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 290 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 319
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KNM + SP RR+
Sbjct: 168 NGHKPPGSSEPITVKFA------ANPNQNKNMAL-LSQLYHSPARRF 207
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +++L+++F GE+ + L D+ G GY + Y ++A+ AI+ +
Sbjct: 22 LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTL 81
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 82 NGLRLQSKTIKVSYA---RPSSEVIKDANL 108
>gi|449439229|ref|XP_004137389.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-like [Cucumis sativus]
gi|449507153|ref|XP_004162947.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-like [Cucumis sativus]
Length = 289
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ +E DL +F +G + +++ +D++TG +G+ + + N E+AQ AI +
Sbjct: 210 VRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKL 269
Query: 152 NGGELLTQTLTVDWA 166
NG L V+WA
Sbjct: 270 NGYGYDNLILRVEWA 284
>gi|329956785|ref|ZP_08297354.1| hypothetical protein HMPREF9445_02226 [Bacteroides clarus YIT
12056]
gi|328523824|gb|EGF50911.1| hypothetical protein HMPREF9445_02226 [Bacteroides clarus YIT
12056]
Length = 99
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I ++G+ DL N+F E+GE+ + + LDR TG +G+A +E N E Q AI +
Sbjct: 3 IYISGLSYGVNNADLTNLFAEFGEVSSAKVILDRETGRSRGFAFVEMSNDTEGQKAIDEL 62
Query: 152 NGGELLTQTLTVDWA 166
NG E ++ ++V A
Sbjct: 63 NGVEYDSKVISVSVA 77
>gi|225448281|ref|XP_002274860.1| PREDICTED: uncharacterized protein LOC100242306 [Vitis vinifera]
gi|296086805|emb|CBI32954.3| unnamed protein product [Vitis vinifera]
Length = 255
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL F +YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDIKDTFSLLVLNITFRTTADDLFPFFDKYGKVVDIFIPRDRRTGESRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ +EAQ A+ ++G + + +TV +A
Sbjct: 65 KYADEAQKAVDRLDGRIVDGREITVQFA 92
>gi|386764328|ref|NP_001245647.1| found in neurons, isoform D [Drosophila melanogaster]
gi|194895737|ref|XP_001978329.1| GG17743 [Drosophila erecta]
gi|195045911|ref|XP_001992055.1| GH24423 [Drosophila grimshawi]
gi|195397025|ref|XP_002057129.1| GJ16518 [Drosophila virilis]
gi|195447330|ref|XP_002071166.1| GK25647 [Drosophila willistoni]
gi|195478085|ref|XP_002100403.1| fne [Drosophila yakuba]
gi|190649978|gb|EDV47256.1| GG17743 [Drosophila erecta]
gi|193892896|gb|EDV91762.1| GH24423 [Drosophila grimshawi]
gi|194146896|gb|EDW62615.1| GJ16518 [Drosophila virilis]
gi|194167251|gb|EDW82152.1| GK25647 [Drosophila willistoni]
gi|194187927|gb|EDX01511.1| fne [Drosophila yakuba]
gi|307344716|gb|ADN43900.1| RT06051p [Drosophila melanogaster]
gi|383293360|gb|AFH07361.1| found in neurons, isoform D [Drosophila melanogaster]
Length = 353
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
Query: 36 PKLKSAITGGAPKKTK-GRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILV 94
P L + +T A T+ G A R+S LA + L PG + GW I V
Sbjct: 218 PPLTAYLTPQAAAATRRLAGALPSAGRIRYSPLAG---DLLANSILPGNAMTGSGWCIFV 274
Query: 95 TGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGG 154
+ E +E+ L +FG +G ++++ + D +T KG+ + N++EA AI ++NG
Sbjct: 275 YNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGY 334
Query: 155 ELLTQTLTVDW 165
L + L V +
Sbjct: 335 TLGNRVLQVSF 345
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
SI+G + V+G+ + + DL+ +F +G+I + D +G KG I ++ EA+
Sbjct: 123 SIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAE 182
Query: 146 NAITAMNGGELLTQTLTVDWAFSNGPS 172
AI +NG + F+N PS
Sbjct: 183 RAIQELNGKTPKGYAEPITVKFANNPS 209
>gi|389608769|dbj|BAM17996.1| repressor splicing factor 1 [Papilio xuthus]
Length = 158
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V G+ E +++DL+ F +YG++ ++ + L+ G+A IE+EN +EA++A +AM
Sbjct: 8 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENMQEAEDACSAM 62
Query: 152 NGGELLTQTLTVDWA 166
NG E+L TL V+ +
Sbjct: 63 NGFEMLGATLKVELS 77
>gi|373953846|ref|ZP_09613806.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
gi|373890446|gb|EHQ26343.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
Length = 107
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I + G+ + +E++L VFG++G +++L + DR TG KG+ +E N +EA+ AI M
Sbjct: 3 IFIAGLPFQVEEEELTAVFGDFGHVKSLRIVKDRETGQSKGFGFVEMTNDDEAKEAIKNM 62
Query: 152 NGGELLTQTLTVDWA 166
NG + + ++V A
Sbjct: 63 NGADYYGRRISVAEA 77
>gi|149716413|ref|XP_001497933.1| PREDICTED: ELAV-like protein 1 [Equus caballus]
Length = 326
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 230 GLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 289
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 290 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 319
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ A+ +
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAVNTL 81
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 82 NGLRLQSKTIKVSYA---RPSSEVIKDANL 108
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KN+ + SP RR+
Sbjct: 168 NGHKPPGSSEPITVKFA------ANPNQNKNVAL-LSQLYHSPARRF 207
>gi|73986922|ref|XP_854218.1| PREDICTED: ELAV-like protein 1 isoform 1 [Canis lupus familiaris]
gi|301773126|ref|XP_002921957.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Ailuropoda
melanoleuca]
gi|344299314|ref|XP_003421331.1| PREDICTED: ELAV-like protein 1 [Loxodonta africana]
gi|281349989|gb|EFB25573.1| hypothetical protein PANDA_010904 [Ailuropoda melanoleuca]
Length = 326
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 230 GLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 289
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 290 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 319
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ AI +
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 82 NGLRLQSKTIKVSYA---RPSSEVIKDANL 108
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KN+ + SP RR+
Sbjct: 168 NGHKPPGSSEPITVKFA------ANPNQNKNVAL-LSQLYHSPARRF 207
>gi|115497832|ref|NP_001069922.1| ELAV-like protein 1 [Bos taurus]
gi|261244966|ref|NP_001159666.1| ELAV-like protein 1 [Ovis aries]
gi|73587279|gb|AAI02496.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Bos taurus]
gi|256665397|gb|ACV04844.1| ELAV-like protein 1 [Ovis aries]
gi|296485836|tpg|DAA27951.1| TPA: ELAV-like 1 (Hu antigen R) [Bos taurus]
Length = 326
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 230 GLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 289
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 290 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 319
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ AI +
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 82 NGLRLQSKTIKVSYA---RPSSEVIKDANL 108
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 108 LYISGLPRNMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KN+ + SP RR+
Sbjct: 168 NGHKPPGSSEPITVKFA------ANPNQNKNVAL-LSQLYHSPARRF 207
>gi|74179923|dbj|BAE36520.1| unnamed protein product [Mus musculus]
Length = 308
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 212 GISGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 271
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 272 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 301
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 90 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 149
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KNM + SP RR+
Sbjct: 150 NGHKPPGSSEPITVKFA------ANPNQNKNMAL-LSQLYHSPARRF 189
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 99 EEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLT 158
+ +++LQ V GE+ + L D+ G GY + Y ++A+ AI+ +NG L +
Sbjct: 11 QNMTQEELQGVLSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNGLRLQS 70
Query: 159 QTLTVDWAFSNGPSTGPFKRKNM 181
+T+ V +A PS+ K N+
Sbjct: 71 KTIKVSYA---RPSSEVIKDANL 90
>gi|7022371|dbj|BAA91575.1| unnamed protein product [Homo sapiens]
Length = 759
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + EDDL+ VF ++G + L +N+ R+ G ++G+ ++++N EA A+
Sbjct: 116 LIIRNLSFKCSEDDLKTVFAQFGAV--LEVNIPRKPDGKMRGFGFVQFKNLLEAGKALKG 173
Query: 151 MNGGELLTQTLTVDWAFSN 169
MN E+ +T+ VDWA +
Sbjct: 174 MNMKEIKGRTVAVDWAVAK 192
>gi|312092240|ref|XP_003147268.1| RNA-binding protein [Loa loa]
Length = 383
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
GW I V + E ++ L +FG +G + ++ + D TG KGY + +E+A AI
Sbjct: 295 GWCIFVYNLPPETEDAVLWQLFGPFGAVLSVKIIKDFSTGKCKGYGFVTMGQYEDAVTAI 354
Query: 149 TAMNGGELLTQTLTVDW 165
T++NG +L +TL V +
Sbjct: 355 TSLNGTQLGNRTLQVSF 371
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+++ + + ++++ +F GEI + L D+ TG GY + Y E+A A+T++
Sbjct: 20 LIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGFVNYIRQEDAYKAVTSL 79
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L +T+ V +A PS+ K N+
Sbjct: 80 NGLRLQNKTIKVSFA---RPSSESIKGANL 106
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
SI+G + V+G+ + + DL+ +F +G+I + D TG KG + ++ EA+
Sbjct: 100 SIKGANLYVSGLAKTMSQLDLEALFKPFGQIITSRILSDNVTGISKGVGFVRFDRKSEAE 159
Query: 146 NAITAMNGGELLTQTLTVDWAFSNGPS 172
+AI +NG T + F+N P+
Sbjct: 160 DAIEKLNGKIPAGCTEPITVKFANSPA 186
>gi|302916719|ref|XP_003052170.1| hypothetical protein NECHADRAFT_104111 [Nectria haematococca mpVI
77-13-4]
gi|256733109|gb|EEU46457.1| hypothetical protein NECHADRAFT_104111 [Nectria haematococca mpVI
77-13-4]
Length = 329
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 12/124 (9%)
Query: 83 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFE 142
P + +G + V +H + EDDL +F G + L L D R G +G A + YE E
Sbjct: 80 PDQESKGSKLRVDNIHYDLTEDDLDELFRRIGPVVRLQLRYD-RAGRSEGTAYVTYELKE 138
Query: 143 EAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNM----------RPGRTHRSRSP 192
+AQ A+ +G Q + + +GP+ PF M PG RS SP
Sbjct: 139 DAQEAVRQFDGANANGQPIRLTL-LPSGPARNPFDTAVMPSRPLAERISAPGDRARSHSP 197
Query: 193 RRRY 196
RRY
Sbjct: 198 HRRY 201
>gi|194764023|ref|XP_001964131.1| GF21392 [Drosophila ananassae]
gi|190619056|gb|EDV34580.1| GF21392 [Drosophila ananassae]
Length = 353
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
Query: 36 PKLKSAITGGAPKKTK-GRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILV 94
P L + +T A T+ G A R+S LA + L PG + GW I V
Sbjct: 218 PPLTAYLTPQAAAATRRLAGALPSAGRIRYSPLAG---DLLANSILPGNAMTGSGWCIFV 274
Query: 95 TGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGG 154
+ E +E+ L +FG +G ++++ + D +T KG+ + N++EA AI ++NG
Sbjct: 275 YNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGY 334
Query: 155 ELLTQTLTVDW 165
L + L V +
Sbjct: 335 TLGNRVLQVSF 345
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
SI+G + V+G+ + + DL+ +F YG+I + D +G KG I ++ EA+
Sbjct: 123 SIKGANLYVSGLPKNLSQPDLEGMFASYGKIITSRILCDNISGLSKGVGFIRFDQRNEAE 182
Query: 146 NAITAMNGGELLTQTLTVDWAFSNGPS 172
AI +NG + F+N PS
Sbjct: 183 RAIQELNGKTPKGYAEPITVKFANNPS 209
>gi|170031159|ref|XP_001843454.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167869230|gb|EDS32613.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 323
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + +D + +FG YGEIR++ +DR F +G+ +++ N + A+NAI M
Sbjct: 177 IHVGRLTRNVVKDHILEIFGTYGEIRSVDFPVDRFQSFTRGFCYVDFVNPDGAENAIKHM 236
Query: 152 NGGELLTQTLTV 163
+GG++ Q +T
Sbjct: 237 DGGQVDGQEITA 248
>gi|431900165|gb|ELK08079.1| ELAV-like protein 1 [Pteropus alecto]
Length = 401
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 305 GLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 364
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 365 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 394
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ AI +
Sbjct: 14 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 73
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 74 NGLRLQSKTIKVSYA---RPSSEVIKDANL 100
>gi|332264173|ref|XP_003281121.1| PREDICTED: ELAV-like protein 1 [Nomascus leucogenys]
Length = 326
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 72 FESLGTDGGPG------PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDR 125
F +G D G P + GW I + + ++A E L +FG +G + N+ + D
Sbjct: 220 FSPMGVDHMSGLSGINVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDF 279
Query: 126 RTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDW 165
T KG+ + N+EEA AI ++NG L + L V +
Sbjct: 280 NTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSF 319
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ AI +
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 82 NGLRLQSKTIKVSYA---RPSSEVIKDANL 108
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KN+ + SP RR+
Sbjct: 168 NGHKPPGSSEPITVKFA------ANPNQNKNVAL-LSQLYHSPARRF 207
>gi|395513446|ref|XP_003760935.1| PREDICTED: ELAV-like protein 1 [Sarcophilus harrisii]
Length = 374
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 278 GLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 337
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 338 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 367
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ AI +
Sbjct: 70 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 129
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 130 NGLRLQSKTIKVSYA---RPSSEVIKDANL 156
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 156 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 215
Query: 152 NG 153
NG
Sbjct: 216 NG 217
>gi|393909831|gb|EFO16801.2| RNA-binding protein [Loa loa]
Length = 414
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
GW I V + E ++ L +FG +G + ++ + D TG KGY + +E+A AI
Sbjct: 326 GWCIFVYNLPPETEDAVLWQLFGPFGAVLSVKIIKDFSTGKCKGYGFVTMGQYEDAVTAI 385
Query: 149 TAMNGGELLTQTLTVDW 165
T++NG +L +TL V +
Sbjct: 386 TSLNGTQLGNRTLQVSF 402
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+++ + + ++++ +F GEI + L D+ TG GY + Y E+A A+T++
Sbjct: 51 LIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGFVNYIRQEDAYKAVTSL 110
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L +T+ V +A PS+ K N+
Sbjct: 111 NGLRLQNKTIKVSFA---RPSSESIKGANL 137
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
SI+G + V+G+ + + DL+ +F +G+I + D TG KG + ++ EA+
Sbjct: 131 SIKGANLYVSGLAKTMSQLDLEALFKPFGQIITSRILSDNVTGISKGVGFVRFDRKSEAE 190
Query: 146 NAITAMNGGELLTQTLTVDWAFSNGPS 172
+AI +NG T + F+N P+
Sbjct: 191 DAIEKLNGKIPAGCTEPITVKFANSPA 217
>gi|328700227|ref|XP_001951393.2| PREDICTED: ELAV-like protein 4-like isoform 1 [Acyrthosiphon pisum]
Length = 383
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Query: 62 ERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHL 121
+R+S LA + L PG + GW I V + E +E+ L +FG +G ++++ +
Sbjct: 260 QRYSPLAG---DLLANSMLPGNSMNGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKV 316
Query: 122 NLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNG 170
D +T KG+ + N++EA AI ++NG L + L V + + G
Sbjct: 317 IRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNKG 365
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +++++++F GE+ + L D+ TG GY + Y E+A+ AI +
Sbjct: 38 LIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVTGQSLGYGFVNYHRPEDAEKAINTL 97
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L +T+ V +A PS+ K N+
Sbjct: 98 NGLRLQNKTIKVSFA---RPSSEAIKGANL 124
Score = 35.8 bits (81), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT--GFV--------KGYAL 135
+I+G + V+G+ + + DL+N+F YG I + D T FV
Sbjct: 118 AIKGANLYVSGLPKHMTQQDLENLFSPYGRIITSRILCDNMTVRQFVGNTGGDHSPCVGF 177
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPST 173
I ++ EA+ AI +NG T ++ F+N PS+
Sbjct: 178 IRFDQRIEAERAIQELNGTVPKGSTESITVKFANNPSS 215
>gi|443899731|dbj|GAC77060.1| nuclear localization sequence binding protein, partial [Pseudozyma
antarctica T-34]
Length = 400
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%)
Query: 84 QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEE 143
QRS + + + + EDD+ N F E+GE+ + L D +G KG+ +E+ E
Sbjct: 296 QRSAPSSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQES 355
Query: 144 AQNAITAMNGGELLTQTLTVDWA 166
AQ AI AM G EL + L +D++
Sbjct: 356 AQAAIDAMTGQELAGRPLRLDFS 378
>gi|359463230|ref|ZP_09251793.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
Length = 95
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E DL+ F ++G ++ + L +DR TG +G+A IE +N E AI +
Sbjct: 3 IFVGNLSYAITEQDLKTAFSQFGAVKQVKLPIDRETGKKQGFAFIEMDNEAEEAKAIKKL 62
Query: 152 NGGELLTQTLTV 163
+GGE + +TLTV
Sbjct: 63 DGGEWMGKTLTV 74
>gi|73965401|ref|XP_537585.2| PREDICTED: ELAV-like protein 1-like [Canis lupus familiaris]
Length = 326
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 230 GLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 289
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 290 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 319
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ AI +
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFLNYVTAKDAERAINTL 81
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 82 NGLRLQSKTIKVSYA---RPSSEVIKDANL 108
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D+++ F + I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 108 LYISGLPRTMTQKDVEDTFSRFWRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KN+ + SP RR+
Sbjct: 168 NGHKPPGSSEPITVKFA------ANPNQNKNVAL-LSQLYHSPARRF 207
>gi|18860091|ref|NP_572842.1| found in neurons, isoform A [Drosophila melanogaster]
gi|161077787|ref|NP_001096965.1| found in neurons, isoform B [Drosophila melanogaster]
gi|386764326|ref|NP_001245646.1| found in neurons, isoform C [Drosophila melanogaster]
gi|386764332|ref|NP_001245648.1| found in neurons, isoform E [Drosophila melanogaster]
gi|386764334|ref|NP_001245649.1| found in neurons, isoform F [Drosophila melanogaster]
gi|442616163|ref|NP_001259497.1| found in neurons, isoform G [Drosophila melanogaster]
gi|442616165|ref|NP_001259498.1| found in neurons, isoform H [Drosophila melanogaster]
gi|7230770|gb|AAF43091.1|AF239667_1 putative RNA binding protein [Drosophila melanogaster]
gi|22833123|gb|AAF48215.3| found in neurons, isoform A [Drosophila melanogaster]
gi|158031803|gb|ABW09403.1| found in neurons, isoform B [Drosophila melanogaster]
gi|289666819|gb|ADD16464.1| RT06063p1 [Drosophila melanogaster]
gi|383293359|gb|AFH07360.1| found in neurons, isoform C [Drosophila melanogaster]
gi|383293361|gb|AFH07362.1| found in neurons, isoform E [Drosophila melanogaster]
gi|383293362|gb|AFH07363.1| found in neurons, isoform F [Drosophila melanogaster]
gi|440216716|gb|AGB95339.1| found in neurons, isoform G [Drosophila melanogaster]
gi|440216717|gb|AGB95340.1| found in neurons, isoform H [Drosophila melanogaster]
Length = 356
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
Query: 36 PKLKSAITGGAPKKTK-GRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILV 94
P L + +T A T+ G A R+S LA + L PG + GW I V
Sbjct: 221 PPLTAYLTPQAAAATRRLAGALPSAGRIRYSPLAG---DLLANSILPGNAMTGSGWCIFV 277
Query: 95 TGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGG 154
+ E +E+ L +FG +G ++++ + D +T KG+ + N++EA AI ++NG
Sbjct: 278 YNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGY 337
Query: 155 ELLTQTLTVDW 165
L + L V +
Sbjct: 338 TLGNRVLQVSF 348
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
SI+G + V+G+ + + DL+ +F +G+I + D +G KG I ++ EA+
Sbjct: 126 SIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAE 185
Query: 146 NAITAMNGGELLTQTLTVDWAFSNGPS 172
AI +NG + F+N PS
Sbjct: 186 RAIQELNGKTPKGYAEPITVKFANNPS 212
>gi|38201714|ref|NP_001410.2| ELAV-like protein 1 [Homo sapiens]
gi|114675067|ref|XP_001156643.1| PREDICTED: ELAV-like protein 1 isoform 2 [Pan troglodytes]
gi|395750352|ref|XP_002828622.2| PREDICTED: ELAV-like protein 1 [Pongo abelii]
gi|395841768|ref|XP_003793705.1| PREDICTED: ELAV-like protein 1 [Otolemur garnettii]
gi|402914021|ref|XP_003919435.1| PREDICTED: ELAV-like protein 1 [Papio anubis]
gi|403296075|ref|XP_003938946.1| PREDICTED: ELAV-like protein 1 [Saimiri boliviensis boliviensis]
gi|426386981|ref|XP_004059957.1| PREDICTED: ELAV-like protein 1 isoform 1 [Gorilla gorilla gorilla]
gi|20981691|sp|Q15717.2|ELAV1_HUMAN RecName: Full=ELAV-like protein 1; AltName: Full=Hu-antigen R;
Short=HuR
gi|13097228|gb|AAH03376.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Homo sapiens]
gi|32879929|gb|AAP88795.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Homo sapiens]
gi|60654991|gb|AAX32059.1| ELAV-like 1 [synthetic construct]
gi|60654993|gb|AAX32060.1| ELAV-like 1 [synthetic construct]
gi|60654995|gb|AAX32061.1| ELAV-like 1 [synthetic construct]
gi|60654997|gb|AAX32062.1| ELAV-like 1 [synthetic construct]
gi|119589355|gb|EAW68949.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Homo sapiens]
gi|157928080|gb|ABW03336.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [synthetic construct]
gi|157928791|gb|ABW03681.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [synthetic construct]
gi|208966198|dbj|BAG73113.1| ELAV-like 1protein [synthetic construct]
gi|355703066|gb|EHH29557.1| hypothetical protein EGK_10021 [Macaca mulatta]
gi|355755385|gb|EHH59132.1| hypothetical protein EGM_09177 [Macaca fascicularis]
gi|380784245|gb|AFE63998.1| ELAV-like protein 1 [Macaca mulatta]
gi|383416395|gb|AFH31411.1| ELAV-like protein 1 [Macaca mulatta]
gi|384945706|gb|AFI36458.1| ELAV-like protein 1 [Macaca mulatta]
gi|410212674|gb|JAA03556.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410265350|gb|JAA20641.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410305890|gb|JAA31545.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410342973|gb|JAA40433.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
Length = 326
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 230 GLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 289
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 290 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 319
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ AI +
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 82 NGLRLQSKTIKVSYA---RPSSEVIKDANL 108
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KN+ + SP RR+
Sbjct: 168 NGHKPPGSSEPITVKFA------ANPNQNKNVAL-LSQLYHSPARRF 207
>gi|126323791|ref|XP_001366151.1| PREDICTED: ELAV-like protein 1 [Monodelphis domestica]
Length = 326
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 230 GLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 289
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 290 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 319
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ AI +
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 82 NGLRLQSKTIKVSYA---RPSSEVIKDANL 108
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KN+ + SP RR+
Sbjct: 168 NGHKPPGSSEPITVKFA------ANPNQNKNVAL-LSQLYHSPARRF 207
>gi|326673799|ref|XP_003199996.1| PREDICTED: cleavage stimulation factor subunit 2-like [Danio rerio]
Length = 488
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 26 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 85
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 86 NGREFSGRALRVDNAAS 102
>gi|195133062|ref|XP_002010958.1| GI16282 [Drosophila mojavensis]
gi|193906933|gb|EDW05800.1| GI16282 [Drosophila mojavensis]
Length = 353
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
Query: 36 PKLKSAITGGAPKKTK-GRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILV 94
P L + +T A T+ G A R+S LA + L PG + GW I V
Sbjct: 218 PPLTAYLTPQAAAATRRLAGALPSAGRIRYSPLAG---DLLANSILPGNAMTGSGWCIFV 274
Query: 95 TGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGG 154
+ E +E+ L +FG +G ++++ + D +T KG+ + N++EA AI ++NG
Sbjct: 275 YNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGY 334
Query: 155 ELLTQTLTVDW 165
L + L V +
Sbjct: 335 TLGNRVLQVSF 345
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
SI+G + V+G+ + + DL+ +F +G+I + D +G KG I ++ EA+
Sbjct: 123 SIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAE 182
Query: 146 NAITAMNGGELLTQTLTVDWAFSNGPS 172
AI +NG + F+N PS
Sbjct: 183 RAIQELNGKTPKGYAEPITVKFANNPS 209
>gi|410902657|ref|XP_003964810.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-like [Takifugu rubripes]
Length = 296
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 84 QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEE 143
+R+ + I VT + E+ +E DLQ +F +G I ++L D+ TG KG+A I + E+
Sbjct: 209 RRADDNATIRVTNLSEDTRETDLQELFRPFGAISRIYLAKDKNTGQSKGFAFISFHRRED 268
Query: 144 AQNAITAMNGGELLTQTLTVDWA 166
A AI ++G L V+WA
Sbjct: 269 ASRAIAGVSGFGYDHLILNVEWA 291
>gi|397468866|ref|XP_003806091.1| PREDICTED: RNA-binding protein 28 isoform 1 [Pan paniscus]
Length = 761
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + EDDL+ VF ++G + L +N+ R+ G ++G+ ++++N EA A+
Sbjct: 116 LIIRNLSFKCSEDDLKTVFAQFGAV--LEVNIPRKPDGKMRGFGFVQFKNLLEAGKALKG 173
Query: 151 MNGGELLTQTLTVDWAFSN 169
MN E+ +T+ VDWA +
Sbjct: 174 MNMKEIKGRTVAVDWAVAK 192
>gi|328773933|gb|EGF83970.1| hypothetical protein BATDEDRAFT_36405 [Batrachochytrium
dendrobatidis JAM81]
Length = 217
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V GV +A DL F EYG++ ++++ G +G+A ++++ E+A+ A+ +
Sbjct: 6 IYVRGVPPDASSSDLMEHFEEYGKVNDIYIPKSYHNGRPRGFAYVKFDKQEDAELAMEKI 65
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSR 190
+L QTL V+WA ++ +R + R GR +R
Sbjct: 66 PSIVILGQTLNVEWATGERKTSNDMRRADDRSGRYRSNR 104
>gi|343959022|dbj|BAK63366.1| ELAV-like protein 1 [Pan troglodytes]
Length = 305
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P + GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 209 GLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 268
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ N+EEA AI ++NG L + L V +
Sbjct: 269 VTMTNYEEAAMAIASLNGYRLGDKILQVSF 298
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y ++A+ AI +
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 82 NGLRLQSKTIKVSYA---RPSSEVIKDANL 108
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AIT+
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 152 NG 153
NG
Sbjct: 168 NG 169
>gi|307110924|gb|EFN59159.1| hypothetical protein CHLNCDRAFT_50008 [Chlorella variabilis]
Length = 236
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 73 ESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQN----VFGEYGEIRNLHLNLDRRTG 128
E++ DG P EG + V + E+ +DDL+ +FG++G+I ++ + RRT
Sbjct: 5 EAMAVDGAAAPAPQNEGHTVYVNNLPEKVSQDDLKKAMHCIFGQFGKILDV---VSRRTY 61
Query: 129 FVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWA 166
++G A + +E E+A+NA+ M G L + L + A
Sbjct: 62 RLRGQAWVVFEKAEDAKNALDCMQGFPFLDKPLRIALA 99
>gi|296210709|ref|XP_002752086.1| PREDICTED: RNA-binding protein 28 isoform 1 [Callithrix jacchus]
Length = 760
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + ED+L+ VF ++G + L +N+ R+ G ++G+A ++++N EA A+
Sbjct: 116 LIIRNLSFKCSEDELKTVFAQFGAV--LEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKG 173
Query: 151 MNGGELLTQTLTVDWAFSN 169
MN E+ +T+ VDWA +
Sbjct: 174 MNMKEIKGRTVAVDWAVAK 192
>gi|148232140|ref|NP_001088628.1| ELAV-like protein 1-B [Xenopus laevis]
gi|82232943|sp|Q5U259.1|ELV1B_XENLA RecName: Full=ELAV-like protein 1-B; AltName: Full=Protein ElrA-B;
Short=ElrA
gi|55250533|gb|AAH86269.1| LOC495680 protein [Xenopus laevis]
Length = 326
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
GW I + + ++A E L +FG +G + N+ + D T KG+ + N+EEA AI
Sbjct: 243 GWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAI 302
Query: 149 TAMNGGELLTQTLTVDW 165
++NG L +TL V +
Sbjct: 303 ASLNGYRLGDKTLQVSF 319
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++F GE+ + L D+ G GY + Y N ++A+ AI +
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAINTL 81
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 82 NGLRLQSKTIKVSFA---RPSSETIKDANL 108
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + D++++F +G I N + +D+ TG +G A I ++ EA+ AI +
Sbjct: 108 LYISGLPRTMTQKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASF 167
Query: 152 NGGEL--LTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + ++ +TV +A P + KNM + SP RR+
Sbjct: 168 NGHKPPGSSEPITVKFA------ANPNQSKNMAL-LSQICHSPARRF 207
>gi|18858877|ref|NP_570984.1| ELAV-like protein 1 [Danio rerio]
gi|6694225|gb|AAF25188.1|AF184245_1 ribonucleoprotein [Danio rerio]
Length = 322
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
GW I V + ++A E L +FG +G + N+ + D T KG+ + N+EEA AI
Sbjct: 239 GWCIFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTSKCKGFGFVTMTNYEEAAMAI 298
Query: 149 TAMNGGELLTQTLTVDW 165
+++NG L + L V +
Sbjct: 299 SSLNGYRLGDKVLQVSF 315
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+++ + + +++L+++F GE+ + L D+ G GY + Y N +A+ AI +
Sbjct: 20 LIINYLPQNMSQEELRSLFSSIGEVESAKLIRDKMAGHSLGYGFVNYVNPSDAERAINTL 79
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L ++T+ V +A PS+ K N+
Sbjct: 80 NGLRLQSKTIKVSYA---RPSSDGIKDANL 106
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ ++G+ + + +++++F +YG I N + +D+ +G +G A I ++ EA+ AI +
Sbjct: 106 LYISGLPKTMTQKNVEDMFTQYGRIINSRILVDQASGLSRGVAFIRFDKRSEAEEAIKDL 165
Query: 152 NGGEL--LTQTLTVDWA 166
NG + ++ +TV +A
Sbjct: 166 NGSKPSGASEPITVKFA 182
>gi|383865034|ref|XP_003707981.1| PREDICTED: ELAV-like protein 2-like [Megachile rotundata]
Length = 502
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 62 ERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHL 121
+R+S LA + L PG + GW I V + E +E+ L +FG +G ++++ +
Sbjct: 264 QRYSPLAG---DLLANSMLPGNAMNGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKV 320
Query: 122 NLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDW 165
D +T KG+ + N++EA AI ++NG L + L V +
Sbjct: 321 IRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSF 364
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+++++F GE+ + L D+ TG GY + Y E+A+ AI +
Sbjct: 30 LIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLTGQSLGYGFVNYHRSEDAEKAINTL 89
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L +T+ V +A PS+ K N+
Sbjct: 90 NGLRLQNKTIKVSYA---RPSSEAIKGANL 116
Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 16/124 (12%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-------------GFVKG 132
+I+G + V+G+ + + DL+N+F YG I + D T G KG
Sbjct: 110 AIKGANLYVSGLPKNMTQQDLENLFSPYGRIITSRILCDNITVRQFVTGGGDYLPGLSKG 169
Query: 133 YALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSP 192
I ++ EA+ AI +NG + + F+N PS K + P + +
Sbjct: 170 VGFIRFDQRVEAERAIQELNGTIPKGSSEPITVKFANNPSN---NNKAIPPLAAYLTPQA 226
Query: 193 RRRY 196
RR+
Sbjct: 227 TRRF 230
>gi|170054071|ref|XP_001862961.1| cleavage stimulation factor 64 kDa subunit [Culex quinquefasciatus]
gi|167874431|gb|EDS37814.1| cleavage stimulation factor 64 kDa subunit [Culex quinquefasciatus]
Length = 400
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + +L L DR +G KGY EY++ E A +A+ +
Sbjct: 17 VFVGNIPYEATEEKLKDIFSEVGPVISLKLVFDRESGKPKGYGFCEYKDQETALSAMRNL 76
Query: 152 NGGELLTQTLTVDWAFS 168
NG E+ + L VD A +
Sbjct: 77 NGYEIGGRALRVDNACT 93
>gi|428308134|ref|YP_007144959.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428249669|gb|AFZ15449.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 113
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E EDDL +VF EYG ++ ++L DR TG +G+A +E + ++ AI A+
Sbjct: 3 IYVGNLSYEVTEDDLNSVFAEYGTVKRVNLPNDRETGRPRGFAFVEMQTEDQENAAIEAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + + L V+ A
Sbjct: 63 DGAEWMGRDLKVNKA 77
>gi|358421036|ref|XP_001254105.2| PREDICTED: cleavage stimulation factor subunit 2-like [Bos taurus]
Length = 331
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|209737716|gb|ACI69727.1| Eukaryotic translation initiation factor 3 subunit G [Salmo salar]
Length = 298
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I VT + E+ +E DLQ +F +G I ++L D+ TG KG+A I + E+A AI +
Sbjct: 219 IRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKNTGQSKGFAFISFHRREDAARAIAGV 278
Query: 152 NGGELLTQTLTVDWA 166
+G L V+WA
Sbjct: 279 SGFGYDHLILNVEWA 293
>gi|157118056|ref|XP_001658986.1| hypothetical protein AaeL_AAEL008164 [Aedes aegypti]
gi|108875838|gb|EAT40063.1| AAEL008164-PA [Aedes aegypti]
Length = 363
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
GW I + + E +E+ L +FG +G ++N+ + D T KGY + N+EEA AI
Sbjct: 275 GWSIFIYNLAPETEENTLWQLFGPFGAVQNVKVIKDSATNQCKGYGFVTMTNYEEAMLAI 334
Query: 149 TAMNGGELLTQTLTVDW 165
++NG L + L V +
Sbjct: 335 RSLNGYTLGQRVLQVSF 351
Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 87 IEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQN 146
I+G + ++G+ + +++L+ +F YGEI + + KG I ++ +EA+
Sbjct: 124 IKGANLYISGLPKTITQEELETIFRPYGEIITSRVLVQEGNDKPKGVGFIRFDQRKEAER 183
Query: 147 AITAMNGG--ELLTQTLTVDWAFSNGP 171
AI A+NG + LT +TV FSN P
Sbjct: 184 AIAALNGTTPKGLTDPITVK--FSNTP 208
>gi|343427935|emb|CBQ71460.1| related to NSR1-nuclear localization sequence binding protein
[Sporisorium reilianum SRZ2]
Length = 459
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 84 QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEE 143
QRS + + + + EDD+ N F E+GE+ + L D +G KG+ +E+ E
Sbjct: 300 QRSAPSSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQES 359
Query: 144 AQNAITAMNGGELLTQTLTVDWA 166
AQ A+ AM G EL + L +D++
Sbjct: 360 AQAALDAMTGQELAGRPLRLDFS 382
>gi|198467583|ref|XP_002134579.1| GA22283 [Drosophila pseudoobscura pseudoobscura]
gi|198149314|gb|EDY73206.1| GA22283 [Drosophila pseudoobscura pseudoobscura]
Length = 353
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
Query: 36 PKLKSAITGGAPKKTK-GRGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILV 94
P L + +T A T+ G A R+S LA + L PG + GW I V
Sbjct: 218 PPLTAYLTPQAAAATRRLAGALPNAGRIRYSPLAG---DLLANSILPGNAMTGSGWCIFV 274
Query: 95 TGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGG 154
+ E +E+ L +FG +G ++++ + D +T KG+ + N++EA AI ++NG
Sbjct: 275 YNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGY 334
Query: 155 ELLTQTLTVDW 165
L + L V +
Sbjct: 335 TLGNRVLQVSF 345
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
SI+G + V+G+ + + DL+ +F +G+I + D +G KG I ++ EA+
Sbjct: 123 SIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAE 182
Query: 146 NAITAMNGGELLTQTLTVDWAFSNGPS 172
AI +NG + F+N PS
Sbjct: 183 RAIQELNGKTPKGYAEPITVKFANNPS 209
>gi|347966748|ref|XP_321180.5| AGAP001883-PA [Anopheles gambiae str. PEST]
gi|333469916|gb|EAA01735.5| AGAP001883-PA [Anopheles gambiae str. PEST]
Length = 396
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
GW I + + E +E+ L +FG +G ++N+ + D T KGY + N+EEA AI
Sbjct: 314 GWSIFIYNLAPETEENTLWQLFGPFGAVQNVKVIKDAATNQCKGYGFVTMTNYEEAMLAI 373
Query: 149 TAMNGGELLTQTLTVDW 165
++NG L + L V +
Sbjct: 374 RSLNGYTLGQRVLQVSF 390
Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 87 IEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQN 146
I+G + ++G+ + +++L+ +F YGEI + + KG I ++ +EA+
Sbjct: 164 IKGANLYISGLPKTITQEELETIFRPYGEIITSRVLIQDGNDKPKGVGFIRFDQRKEAER 223
Query: 147 AITAMNGG--ELLTQTLTVDWAFSNGP 171
AI A+NG + LT +TV FSN P
Sbjct: 224 AIQALNGTTPKGLTDPITVK--FSNTP 248
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-------GFVKGYALIEYENFEEA 144
++V + + E++++++F GE+ ++ L D+ G GY + Y ++A
Sbjct: 76 LIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDKNVIYPGQPKGQSLGYGFVNYHRPQDA 135
Query: 145 QNAITAMNGGELLTQTLTVDWA 166
+ A+ +NG L + L V +A
Sbjct: 136 EQAVNVLNGLRLQNKVLKVSFA 157
>gi|76253771|ref|NP_956408.2| cleavage stimulation factor subunit 2 [Danio rerio]
gi|41107668|gb|AAH65442.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2 [Danio rerio]
Length = 488
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 26 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 85
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 86 NGREFSGRALRVDNAAS 102
>gi|402903547|ref|XP_003914625.1| PREDICTED: cold-inducible RNA-binding protein [Papio anubis]
Length = 199
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 75 LGTDGG---PGPQRSIEGWI--------------ILVTGVHEEAQEDDLQNVFGEYGEIR 117
+GT GG PG RS + + + V G+ + E L+ VF +YG+I
Sbjct: 1 MGTQGGGETPGSHRSSQTQVTPEAQAAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQIS 60
Query: 118 NLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ + DR T +G+ + +EN ++A++A+ AMNG + + + VD A
Sbjct: 61 EVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 109
>gi|348509441|ref|XP_003442257.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-like [Oreochromis niloticus]
Length = 296
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 84 QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEE 143
+R+ + I VT + E+ +E DLQ +F +G I ++L D+ TG KG+A I + E+
Sbjct: 209 RRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKNTGQSKGFAFISFHRRED 268
Query: 144 AQNAITAMNGGELLTQTLTVDWA 166
A AI ++G L V+WA
Sbjct: 269 AARAIAGVSGFGYDHLILNVEWA 291
>gi|221048043|gb|ACL98129.1| hyperosmotic glycine rich protein [Epinephelus coioides]
Length = 175
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ + G+ E E+ L FG+YG I + + D+ TG +G+ ++Y+N ++A++A+ M
Sbjct: 7 LFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNCDDAKDALEGM 66
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPF 176
NG L + + VD A G S F
Sbjct: 67 NGKTLDGRAIRVDEAGKGGRSNRGF 91
>gi|307155022|ref|YP_003890406.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306985250|gb|ADN17131.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 109
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V +H E +E +L+ VF EYG +R ++L DR TG +G+ +E +E AI +
Sbjct: 3 IYVGNLHYEVEEGELREVFAEYGTVRRVYLPEDRETGKKRGFGFVEMSTDDEEDKAIETL 62
Query: 152 NGGELLTQTLTVDWAF--------SNGPSTGPFKRKN 180
+G E + + L V+ A SN S G +++ N
Sbjct: 63 DGAEWMGRQLKVNKARPRENDNRDSNRGSGGGYRKNN 99
>gi|213513670|ref|NP_001134416.1| eukaryotic translation initiation factor 3 subunit G [Salmo salar]
gi|209733110|gb|ACI67424.1| Eukaryotic translation initiation factor 3 subunit G [Salmo salar]
Length = 298
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I VT + E+ +E DLQ +F +G I ++L D+ TG KG+A I + E+A AI +
Sbjct: 219 IRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKNTGQSKGFAFISFHRREDAARAIAGV 278
Query: 152 NGGELLTQTLTVDWA 166
+G L V+WA
Sbjct: 279 SGFGYDHLILNVEWA 293
>gi|20975278|dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica]
Length = 166
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V G+ + +E +L+ VFG+YG+I + + DR T +G+ + +EN E+A++A+ AM
Sbjct: 9 LFVGGLSFDTEEQNLEQVFGKYGQISEVVVVKDRETQRSRGFGFVTFENPEDAKDAMEAM 68
Query: 152 NGGELLTQTLTVDWA 166
NG + + + VD A
Sbjct: 69 NGKSVDGRQIRVDQA 83
>gi|193620317|ref|XP_001945375.1| PREDICTED: hypothetical protein LOC100159253 isoform 1
[Acyrthosiphon pisum]
gi|328716903|ref|XP_003246070.1| PREDICTED: hypothetical protein LOC100159253 isoform 2
[Acyrthosiphon pisum]
Length = 317
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 40/61 (65%)
Query: 103 EDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLT 162
++ +Q +F ++G I+ + + LDR KG++ IEY + EEA+NA+ M+GG++ Q +T
Sbjct: 173 KEHIQEIFSDFGTIKEVDVPLDRFNKLCKGFSYIEYSSPEEAENAMKHMDGGQIDGQEIT 232
Query: 163 V 163
Sbjct: 233 C 233
>gi|449460375|ref|XP_004147921.1| PREDICTED: zinc finger CCCH domain-containing protein 25-like
[Cucumis sativus]
Length = 395
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 91 IILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITA 150
+ V G+ + E DL VF +YGEI +++L D+ TG KGYA + YE+ A+
Sbjct: 37 YVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDN 96
Query: 151 MNGGELLTQTLTVD 164
+NG ++L + + VD
Sbjct: 97 LNGAQILGRIVRVD 110
>gi|354470657|ref|XP_003497561.1| PREDICTED: RNA-binding protein 28 isoform 2 [Cricetulus griseus]
Length = 746
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-GFVKGYALIEYENFEEAQNAITA 150
+++ + + EDDL+ F YG + L +N+ R+ G ++G+A ++++N EA A+
Sbjct: 116 LIIRNLSFKCSEDDLKTAFTPYGTV--LEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKG 173
Query: 151 MNGGELLTQTLTVDWAFSN 169
MN E+ +T+ VDWA +
Sbjct: 174 MNMKEIKGRTVAVDWAVAK 192
>gi|102269210|gb|ABF55966.2| cleavage stimulation factor 64-kDa subunit [Bombyx mori]
Length = 326
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 20 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 79
Query: 152 NGGELLTQTLTVDWAFS 168
NG E+ ++L VD A +
Sbjct: 80 NGYEIGGRSLRVDNACT 96
>gi|195430772|ref|XP_002063422.1| GK21899 [Drosophila willistoni]
gi|194159507|gb|EDW74408.1| GK21899 [Drosophila willistoni]
Length = 223
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V G+ +E E L N F +G+I ++ + +D + +G+A IEYE FE+A +AI M
Sbjct: 8 VYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQKHRGFAFIEYEQFEDAASAIDNM 67
Query: 152 NGGELLTQTLTVDWA 166
N EL +T+ V+ A
Sbjct: 68 NDSELCGRTIRVNLA 82
>gi|158335765|ref|YP_001516937.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|359461305|ref|ZP_09249868.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
gi|158306006|gb|ABW27623.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 95
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ + + E EDDL VF EYGE++ + L +DR +G +G+ +E ++ + AI +
Sbjct: 3 VYIGNLSYEVTEDDLSAVFAEYGEVKQVKLPVDRESGRKRGFGFVEMQDESNEEKAIEEL 62
Query: 152 NGGELLTQTLTVDWAFSNGP 171
+G E + +TL V+ A P
Sbjct: 63 DGAEWMGRTLKVNKAKPRTP 82
>gi|195489764|ref|XP_002092875.1| GE11426 [Drosophila yakuba]
gi|194178976|gb|EDW92587.1| GE11426 [Drosophila yakuba]
Length = 655
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D L+ FG++G + ++H+ L R G + G A ++YE +A AI
Sbjct: 48 LIVRNISYKTTDDSLREHFGQWGTLEDVHI-LKRGDGKLVGCAFVQYETINQATKAILNS 106
Query: 152 NGGELLTQTLTVDWAF 167
NG ELL + + VDWA
Sbjct: 107 NGKELLGRKVFVDWAL 122
>gi|126656762|ref|ZP_01727976.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126621982|gb|EAZ92690.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 83
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E E DL VF +YG ++ +H+ DR TG +G+A +E E NAI +
Sbjct: 3 IYVGNLPYEVTEADLNFVFSDYGSVKRVHVPTDRDTGRPRGFAFVELETKANEFNAIETL 62
Query: 152 NGGELLTQTLTVDWA 166
NG E + +T+ VD A
Sbjct: 63 NGAEWMGRTMKVDEA 77
>gi|169623995|ref|XP_001805404.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
gi|111056352|gb|EAT77472.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
Length = 451
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%)
Query: 82 GPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENF 141
G +RS + + + + + +Q +F EYG I + L DR TG +KG+ +++
Sbjct: 290 GDKRSAPANTLFLGNLSFDCSNEGIQEIFQEYGNITRVSLPTDRDTGSLKGFGYVDFGTV 349
Query: 142 EEAQNAITAMNGGELLTQTLTVDWA 166
EEA A+ A+NG E+ + + +D+A
Sbjct: 350 EEATAALEALNGQEVEGRAIRIDYA 374
>gi|432869170|ref|XP_004071657.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-like [Oryzias latipes]
Length = 284
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 84 QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEE 143
+R+ + I VT + E+ +E DLQ +F +G I ++L D+ TG KG+A I + E+
Sbjct: 197 RRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKNTGQSKGFAFISFHRRED 256
Query: 144 AQNAITAMNGGELLTQTLTVDWA 166
A AI ++G L V+WA
Sbjct: 257 AARAIAGVSGFGYDHLILNVEWA 279
>gi|328792242|ref|XP_394166.4| PREDICTED: ELAV-like protein 2-like [Apis mellifera]
Length = 378
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 62 ERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHL 121
+R+S LA + L PG + GW I V + E +E+ L +FG +G ++++ +
Sbjct: 270 QRYSPLAG---DLLANSMLPGNAMNGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKV 326
Query: 122 NLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDW 165
D +T KG+ + N++EA AI ++NG L + L V +
Sbjct: 327 IRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSF 370
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+++++F GE+ + L D+ TG GY + Y E+A+ AI +
Sbjct: 30 LIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLTGQSLGYGFVNYHRPEDAEKAINTL 89
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L +T+ V +A PS+ K N+
Sbjct: 90 NGLRLQNKTIKVSYA---RPSSEAIKGANL 116
>gi|148235297|ref|NP_001085979.1| MGC82977 protein [Xenopus laevis]
gi|49118619|gb|AAH73641.1| MGC82977 protein [Xenopus laevis]
Length = 276
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 64 HSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNL 123
HS +++R + G+ P P + V G+ E DL+ VF YG + ++++
Sbjct: 92 HSPMSNRRRHN-GSRANPDPN-----ICVGVFGLSLYTTERDLREVFSRYGPLSSVNVVY 145
Query: 124 DRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFS 168
D+RTG +G+A + +E E+++ A+ +NG EL + L VD++ +
Sbjct: 146 DQRTGRSRGFAFVYFERMEDSREAMEHVNGMELDGRKLRVDYSIT 190
>gi|431915005|gb|ELK15824.1| Heterogeneous nuclear ribonucleoprotein G [Pteropus alecto]
Length = 390
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ + G++ + E L+ VFG+YG I + L DR T +G+A I +EN E+A++A M
Sbjct: 10 LFIGGLNIDTNEKALEAVFGKYGPIIEVLLMKDRETNRSRGFAFITFENPEDAKDATKDM 69
Query: 152 NGGELLTQTLTVDWA 166
NG L + + V+ A
Sbjct: 70 NGKSLDGKLIKVEQA 84
>gi|324515203|gb|ADY46121.1| Eukaryotic translation initiation factor 3 subunit G [Ascaris suum]
Length = 285
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G GG QRS E VT + EE E +L+ +F + G++ + + D+ T KG+A
Sbjct: 192 GLGGGMEKQRSDEN-TCRVTNLPEECDEMELRGLFTQIGQVSRVFIAKDKHTNKPKGFAF 250
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDWAFSN 169
+ YE+ E A+ AI +NG +L L V+W N
Sbjct: 251 VTYEHREHAEMAIQKLNGYKLDHLVLKVEWTRPN 284
>gi|409079599|gb|EKM79960.1| hypothetical protein AGABI1DRAFT_113205 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 298
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V G+ + E D+ +F +YGEI +++L D+ TG KG+ + YE+ A+ +
Sbjct: 34 IFVGGLSYDLSEGDVITIFSQYGEIMDVNLPRDKETGKTKGFGFVMYEDQRSTVLAVDNL 93
Query: 152 NGGELLTQTLTVD 164
NG ++L +TL VD
Sbjct: 94 NGAKVLERTLRVD 106
>gi|281209343|gb|EFA83511.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 1109
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I + +H E DL ++F +G I++L L+ D TG KGY IEY E A NAI+ M
Sbjct: 687 IYIGNIHFNLTETDLTSIFSPFGPIKSLSLSKDPATGKSKGYCFIEYSYPEAANNAISHM 746
Query: 152 NGGEL 156
N L
Sbjct: 747 NHQSL 751
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + ED ++ +F G + + L + +G KG+ I+Y+N + A++AI +
Sbjct: 875 IYVGSIPWNVNEDQIKVIFSSIGNVVSCSLMPNLESGRHKGFGFIDYDNSKSAEDAIATL 934
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRT 186
NG ++ + L V N + + K P T
Sbjct: 935 NGYDIGGRQLKVGRPIKNASISSSNESKQTTPLST 969
>gi|340709266|ref|XP_003393232.1| PREDICTED: ELAV-like protein 2-like [Bombus terrestris]
Length = 533
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 62 ERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHL 121
+R+S LA + L PG + GW I V + E +E+ L +FG +G ++++ +
Sbjct: 263 QRYSPLAG---DLLANSMLPGNAMNGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKV 319
Query: 122 NLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDW 165
D +T KG+ + N++EA AI ++NG L + L V +
Sbjct: 320 IRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSF 363
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+++++F GE+ + L D+ TG GY + Y E+A+ AI +
Sbjct: 30 LIVNYLPQSMTQDEIRSLFASIGEVESCKLIRDKLTGQSLGYGFVNYHRPEDAEKAINTL 89
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L +T+ V +A PS+ K N+
Sbjct: 90 NGLRLQNKTIKVSYA---RPSSEAIKGANL 116
Score = 38.9 bits (89), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 13/100 (13%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-------------GFVKG 132
+I+G + V+G+ + + DL+N+F YG I + D T G KG
Sbjct: 110 AIKGANLYVSGLPKNMTQQDLENLFNPYGRIITSRILCDNITVRQFVTGGGDYLPGLSKG 169
Query: 133 YALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPS 172
I ++ EA+ AI +NG + + F+N PS
Sbjct: 170 VGFIRFDQRVEAERAIQELNGTVPKGSSEPITVKFANNPS 209
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ + GV E L+ F +YGE+ + + +DR TG +G+ I Y + EEA +AI A+
Sbjct: 44 LFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQAL 103
Query: 152 NGGELLTQTLTVDWA 166
+G +L + + V++A
Sbjct: 104 DGQDLHGRPIRVNYA 118
>gi|134109015|ref|XP_776622.1| hypothetical protein CNBC1150 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259302|gb|EAL21975.1| hypothetical protein CNBC1150 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 375
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 91 IILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITA 150
+I+V+G+ + + L +F EYG I + L L + +G KG A IE++ A A+
Sbjct: 60 VIVVSGLSKNVMKGHLDEIFSEYGRITGIDLPLFKVSGLNKGKAAIEFDTPAAASKAVKC 119
Query: 151 MNGGELLTQTLTV 163
M+GG+L L V
Sbjct: 120 MDGGQLDGSFLNV 132
>gi|434398120|ref|YP_007132124.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428269217|gb|AFZ35158.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 96
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + + DL +VF EYG ++ +HL DR TG V+G+A +E E AI A+
Sbjct: 3 IYVGNLDYGVTQADLTDVFAEYGSVKRVHLPTDRDTGRVRGFAFVEMGTEAEEDKAIDAL 62
Query: 152 NGGELLTQTLTVDWA 166
NG E + + L V+ A
Sbjct: 63 NGAEWMDRELKVNKA 77
>gi|428203044|ref|YP_007081633.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427980476|gb|AFY78076.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 103
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E E +L +VF EYG ++ +HL DR TG ++G+A +E E + AI A+
Sbjct: 3 IYVGNLSYEVTEAELNSVFAEYGSVKRVHLPTDRETGRMRGFAFVEMETTAQEAAAIEAL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + L V+ A
Sbjct: 63 DGAEWYGRELKVNQA 77
>gi|440802658|gb|ELR23587.1| Eukaryotic translation initiation factor 3 subunit [Acanthamoeba
castellanii str. Neff]
Length = 266
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ +EDDL+ + +G I+ + L DR +G +G+A + + E+ AI A+
Sbjct: 185 VRVTNLSEDTREDDLRELCRRFGPIQRVFLAKDRHSGLSRGFAFVTFVYREDGAKAIEAL 244
Query: 152 NGGELLTQTLTVDWAFSNGP 171
NG L V+WA +GP
Sbjct: 245 NGFGYDHLVLAVEWAKPSGP 264
>gi|448878409|gb|AGE46167.1| arginine/serine-rich splicing factor SC39 transcript I
[Physcomitrella patens subsp. patens]
Length = 340
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ +EAQ AI ++G + + + V A
Sbjct: 65 KYSDEAQKAIERLDGRAVDGRNIVVQSA 92
>gi|392568432|gb|EIW61606.1| hypothetical protein TRAVEDRAFT_69926 [Trametes versicolor
FP-101664 SS1]
Length = 333
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I G++ E E D+ +F +YGEI ++++ D+ TG KG+A + YE+ A+ +
Sbjct: 33 IFAGGLNTELTEGDVITIFSQYGEIMDVNMPRDKETGKPKGFAFVMYEDQRSTVLAVDNL 92
Query: 152 NGGELLTQTLTVD 164
NG ++L +T+ VD
Sbjct: 93 NGAKILERTIRVD 105
>gi|325179763|emb|CCA14166.1| splicing factor putative [Albugo laibachii Nc14]
Length = 207
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 50/85 (58%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
G +L+ + + D+L+ F E+G++R++++ D T VKG+A +E++N +A+ A+
Sbjct: 6 GISLLIRNISRRMRSDELRKTFEEFGDVRDVYIPRDFHTREVKGFAFVEFKNERDAEEAL 65
Query: 149 TAMNGGELLTQTLTVDWAFSNGPST 173
++G L + +TV +A ST
Sbjct: 66 RNLDGSRLDGREITVVFAQEKRKST 90
>gi|311248720|ref|XP_003123296.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-like [Sus scrofa]
Length = 342
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 84 QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEE 143
+R+ + I VT + E+ +E DLQ +F +G I ++L D+ TG KG+A I + E+
Sbjct: 255 RRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRRED 314
Query: 144 AQNAITAMNGGELLTQTLTVDWA 166
A AI ++G L V+WA
Sbjct: 315 AARAIAGVSGFGYDHLILNVEWA 337
>gi|125774537|ref|XP_001358527.1| GA20525 [Drosophila pseudoobscura pseudoobscura]
gi|54638266|gb|EAL27668.1| GA20525 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+ +F E G + +L L DR +G KG+ EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E+ +TL VD A +
Sbjct: 78 NGYEIGGRTLRVDNACT 94
>gi|82236106|sp|Q6DRC4.1|EIF3G_DANRE RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Eukaryotic
translation initiation factor 3 subunit 4
gi|49619137|gb|AAT68153.1| eukaryotic translation initiation factor 3 subunit 4 [Danio rerio]
Length = 293
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 84 QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEE 143
+R+ + I VT + E+ +E DLQ +F +G I ++L D+ TG KG+A I + E+
Sbjct: 206 RRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKNTGQSKGFAFISFHRRED 265
Query: 144 AQNAITAMNGGELLTQTLTVDWA 166
A AI ++G L V+WA
Sbjct: 266 AARAIAGVSGFGYDHLILNVEWA 288
>gi|403415035|emb|CCM01735.1| predicted protein [Fibroporia radiculosa]
Length = 352
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I + G+H + E D+ +F +YGE+ ++++ D+ TG +G+A + YE+ A+ +
Sbjct: 33 IFIGGLHSDLTEGDVITIFSQYGEVMDVNMPRDKATGKTRGFAFLMYEDQRSTILAVDNL 92
Query: 152 NGGELLTQTLTVD 164
N +L +TL VD
Sbjct: 93 NSANVLERTLRVD 105
>gi|387913830|gb|AFK10524.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873312|gb|AFM85488.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873324|gb|AFM85494.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873420|gb|AFM85542.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873526|gb|AFM85595.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873598|gb|AFM85631.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392877296|gb|AFM87480.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
Length = 136
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V G++ +E L+ VF EYG++ + + DR TG +G+ + +E+ ++AQ+A+T+M
Sbjct: 7 LFVGGLNFNTEEQSLEEVFSEYGQVSEVRIIRDRDTGTSRGFGFVTFESPDDAQDALTSM 66
Query: 152 NGGELLTQTLTVDWA 166
NG L + + VD A
Sbjct: 67 NGRSLEGRQIRVDRA 81
>gi|350425139|ref|XP_003494024.1| PREDICTED: ELAV-like protein 2-like [Bombus impatiens]
Length = 371
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 62 ERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHL 121
+R+S LA + L PG + GW I V + E +E+ L +FG +G ++++ +
Sbjct: 263 QRYSPLAG---DLLANSMLPGNAMNGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKV 319
Query: 122 NLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDW 165
D +T KG+ + N++EA AI ++NG L + L V +
Sbjct: 320 IRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSF 363
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+++++F GE+ + L D+ TG GY + Y E+A+ AI +
Sbjct: 30 LIVNYLPQSMTQDEIRSLFASIGEVESCKLIRDKLTGQSLGYGFVNYHRPEDAEKAINTL 89
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L +T+ V +A PS+ K N+
Sbjct: 90 NGLRLQNKTIKVSYA---RPSSEAIKGANL 116
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 13/100 (13%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-------------GFVKG 132
+I+G + V+G+ + + DL+N+F YG I + D T G KG
Sbjct: 110 AIKGANLYVSGLPKNMTQQDLENLFNPYGRIITSRILCDNITVRQFVTGGGDYLPGLSKG 169
Query: 133 YALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPS 172
I ++ EA+ AI +NG + + F+N PS
Sbjct: 170 VGFIRFDQRVEAERAIQELNGTVPKGSSEPITVKFANNPS 209
>gi|197247132|gb|AAI65930.1| Hug protein [Danio rerio]
Length = 219
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
GW I V + ++A E L +FG +G + N+ + D T KG+ + N+EEA AI
Sbjct: 136 GWCIFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTSKCKGFGFVTMTNYEEAAMAI 195
Query: 149 TAMNGGELLTQTLTVDW 165
+++NG L + L V +
Sbjct: 196 SSLNGYRLGDKVLQVSF 212
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 33/53 (62%)
Query: 103 EDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGE 155
+ +++++F +YG I N + +D+ +G +G A I ++ EA+ AI +NG +
Sbjct: 14 QKNVEDMFTQYGRIINSRILVDQASGLSRGVAFIRFDKRSEAEEAIKDLNGSK 66
>gi|126654754|ref|ZP_01726288.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126623489|gb|EAZ94193.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 97
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 49/80 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + + ++DL VF +YG+++ +H+ DR TG ++G+A +E + ++ + AI+ +
Sbjct: 3 IYVGNLSYDVTKEDLSEVFTDYGQVKRVHIPTDRDTGRMRGFAFVEMTSDDQEEKAISTL 62
Query: 152 NGGELLTQTLTVDWAFSNGP 171
+G E + +TL V+ A P
Sbjct: 63 DGAEWMGRTLKVNKAKERQP 82
>gi|608545|gb|AAA96938.1| ribonucleoprotein, partial [Danio rerio]
Length = 245
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 76 GTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYAL 135
G G P S GW I + + ++A E L +FG +G + N+ + D T KG+
Sbjct: 149 GMSGVNVPGNSSSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF 208
Query: 136 IEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ ++EEA AI ++NG L + L V +
Sbjct: 209 VTMTHYEEAAMAIASLNGYRLGDKILQVSF 238
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 41/68 (60%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
SI+ + ++G+ + + D++ +FG YG I N + +D+ +G +G A I ++ EA+
Sbjct: 21 SIKDANLYISGLPKTMTQKDVEEMFGRYGRIINSRVLVDQASGLSRGVAFIRFDKRAEAE 80
Query: 146 NAITAMNG 153
+AI +NG
Sbjct: 81 DAIKDLNG 88
>gi|398409740|ref|XP_003856335.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
gi|339476220|gb|EGP91311.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
Length = 505
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + +A E+ + F E+G I+ + L DR TG KG+ +E + EEAQ A TA+
Sbjct: 350 LFVGNISFDADENAITEYFQEHGTIKAVRLPTDRETGAPKGFGYVEMSSIEEAQAAFTAL 409
Query: 152 NGGELLTQTLTVDWA 166
G ++ + + +D+A
Sbjct: 410 QGADIAGRPIRLDYA 424
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + E+ L F E+GE+ + + DR +G KG+ +E+ + + A+ A+ A
Sbjct: 244 LFVGNISWNVDEEWLTREFEEFGELAGVRIITDRDSGRSKGFGYVEFSDPQNAKKALEAK 303
Query: 152 NGGELLTQTLTVDWA---FSNGPSTG 174
NG EL + L +D++ ++GP G
Sbjct: 304 NGAELDGRELRLDFSTPRTNDGPGAG 329
>gi|395754448|ref|XP_003780626.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Pongo abelii]
Length = 317
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 90 WIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAIT 149
W L+ G+ E E D+ VF +YGEI N++L D++TG KG+ + YE+ A+
Sbjct: 2 WFSLLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVD 61
Query: 150 AMNGGELLTQTLTVD 164
NG ++ +T+ VD
Sbjct: 62 NFNGIKIKGRTIRVD 76
>gi|297820282|ref|XP_002878024.1| initiation factor 3g [Arabidopsis lyrata subsp. lyrata]
gi|297323862|gb|EFH54283.1| initiation factor 3g [Arabidopsis lyrata subsp. lyrata]
Length = 294
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ +E DL +F +G + +++ +D++TG +G+ + + + E+AQ AI +
Sbjct: 215 VRVTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKL 274
Query: 152 NGGELLTQTLTVDWA 166
NG L V+WA
Sbjct: 275 NGYGYDNLILRVEWA 289
>gi|45382281|ref|NP_990163.1| RNA-binding protein HuC [Gallus gallus]
gi|5738251|gb|AAD50314.1|AF176674_1 RNA-binding protein HuC [Gallus gallus]
Length = 365
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 62 ERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHL 121
+R S LA +LG G G GW I V + EA E FG +G + N+ +
Sbjct: 258 KRFSPLAIEAVPALGAGVGLGS----PGWCIFVYNLAPEADESVFWQFFGPFGAVTNVKI 313
Query: 122 NLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDW 165
D T KG+ + N++EA AI ++NG L + L V +
Sbjct: 314 IRDFATNKCKGFGFVTMTNYDEAAVAIASLNGYRLGERVLQVSF 357
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+L+++FG G+I + L D+ TG GY + Y +A AI+ +
Sbjct: 52 LIVNYLPQNMSQDELRSLFGSLGDIESCKLVRDKVTGQSLGYGFVNYVEAGDADKAISTL 111
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG +L T+T+ V +A PS+ + N+
Sbjct: 112 NGLKLQTKTIKVSYA---RPSSASIRDANL 138
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 43/80 (53%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V+G+ + + +++ +F +YG I + +D+ TG +G I ++ EA+ A+ +
Sbjct: 138 LYVSGLPKAMGQKEMEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRVEAEEAVRGL 197
Query: 152 NGGELLTQTLTVDWAFSNGP 171
+G + L T + F+N P
Sbjct: 198 HGQKPLGATEPITVKFANSP 217
>gi|425453862|ref|ZP_18833615.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9807]
gi|389799968|emb|CCI20517.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9807]
Length = 97
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E ++D+ VF EYG I+ +HL +DR T +G+A +E E E+ AI A+
Sbjct: 3 IYVGNLPFEVDQNDVVEVFTEYGTIKRVHLPMDRETKRKRGFAFVEMETPEQESAAIAAL 62
Query: 152 NGGELLTQTLTVDWAFSNGPST 173
+G + + + L V+ A P +
Sbjct: 63 DGAQWMGRELKVNQAREKEPRS 84
>gi|195145742|ref|XP_002013849.1| GL24357 [Drosophila persimilis]
gi|194102792|gb|EDW24835.1| GL24357 [Drosophila persimilis]
Length = 418
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+ +F E G + +L L DR +G KG+ EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E+ +TL VD A +
Sbjct: 78 NGYEIGGRTLRVDNACT 94
>gi|41055184|ref|NP_957491.1| transformer-2 protein homolog beta [Danio rerio]
gi|29124601|gb|AAH49051.1| Splicing factor, arginine/serine-rich, 10 [Danio rerio]
Length = 278
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 75 LGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYA 134
+G P P + V G+ E DL+ VF +YG + ++ + D+++ +G+A
Sbjct: 113 IGDRANPDPN-----CCLGVFGLSLYTTERDLREVFSKYGPLSDVCIVYDQQSRRSRGFA 167
Query: 135 LIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPST 173
L+ +EN E+++ A NG EL + + VD++ + GP T
Sbjct: 168 LVYFENREDSKEAKERANGMELDGRRIRVDYSITKGPHT 206
>gi|356526850|ref|XP_003532029.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-A-like isoform 1 [Glycine max]
gi|356526852|ref|XP_003532030.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-A-like isoform 2 [Glycine max]
Length = 290
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ +E DL +F +G + +++ +D++TG +G+ + + N E+AQ AI +
Sbjct: 211 VRVTNLSEDTREPDLLELFRPFGPVSRVYVAIDQKTGMSRGFGFVNFVNREDAQRAIGKL 270
Query: 152 NGGELLTQTLTVDWA 166
NG L V+WA
Sbjct: 271 NGYGYDNLILRVEWA 285
>gi|320580913|gb|EFW95135.1| eukaryotic translation initiation factor 3 Rna-binding subunit,
putative [Ogataea parapolymorpha DL-1]
Length = 286
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT ++E+ E L+ VF YG I+ + DR T KG A +E+EN +AQ A+ +
Sbjct: 207 LRVTSLNEQVDEMMLREVFERYGIIKRATVLRDRETRRSKGIAFVEFENVNDAQRALEGL 266
Query: 152 NGGELLTQTLTVDWA 166
NG + + VDW+
Sbjct: 267 NGRGFMNLIMKVDWS 281
>gi|380027075|ref|XP_003697261.1| PREDICTED: ELAV-like protein 2-like [Apis florea]
Length = 362
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 62 ERHSRLADRNFESLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHL 121
+R+S LA + L PG + GW I V + E +E+ L +FG +G ++++ +
Sbjct: 254 QRYSPLAG---DLLANSMLPGNAMNGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKV 310
Query: 122 NLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDW 165
D +T KG+ + N++EA AI ++NG L + L V +
Sbjct: 311 IRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSF 354
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+++++F GE+ + L D+ TG GY + Y E+A+ AI +
Sbjct: 30 LIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLTGQSLGYGFVNYHRPEDAEKAINTL 89
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L +T+ V +A PS+ K N+
Sbjct: 90 NGLRLQNKTIKVSYA---RPSSEAIKGANL 116
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 13/100 (13%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRT-------------GFVKG 132
+I+G + V+G+ + + DL+N+F YG I + D T G KG
Sbjct: 110 AIKGANLYVSGLPKNMTQQDLENLFSPYGRIITSRILCDNITVRQFVTGGGDYLPGLSKG 169
Query: 133 YALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPS 172
I ++ EA+ AI +NG + + F+N PS
Sbjct: 170 VGFIRFDQRVEAERAIQELNGTIPKGSSEPITVKFANNPS 209
>gi|148909922|gb|ABR18047.1| unknown [Picea sitchensis]
Length = 267
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F YG++ ++ + DRRTG +G+A Y
Sbjct: 5 GRSGPPDIRDTYSLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDRRTGDSRGFAFFRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ +EAQ A+ ++G + + + V +A
Sbjct: 65 KYADEAQKAVERLDGKNVDGRYIMVQFA 92
>gi|359481742|ref|XP_003632667.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G
isoform 2 [Vitis vinifera]
Length = 286
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 46/75 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V+ + E+ E DL+ +F +G++ +++ +D +TG +G+ + + N E+A+ AI+ +
Sbjct: 207 VRVSNLSEDTHEADLRELFSRFGQLTRVYVAIDHKTGLSRGFGYVNFVNREDAERAISKL 266
Query: 152 NGGELLTQTLTVDWA 166
NG + L V+W+
Sbjct: 267 NGYGYDSLILQVEWS 281
>gi|225459316|ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
gi|302141951|emb|CBI19154.3| unnamed protein product [Vitis vinifera]
Length = 257
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV + DDL +F +YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ +EAQ A+ ++G + + + V +A
Sbjct: 65 KYADEAQKAVEKLDGRNVDGREIMVQFA 92
>gi|317579867|ref|NP_001187558.1| eukaryotic translation initiation factor 3 subunit G [Ictalurus
punctatus]
gi|308323355|gb|ADO28814.1| eukaryotic translation initiation factor 3 subunit g [Ictalurus
punctatus]
Length = 294
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 84 QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEE 143
+R+ + I VT + E+ +E DLQ +F +G I ++L D+ TG KG+A I + E+
Sbjct: 207 RRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKNTGQSKGFAFISFHRRED 266
Query: 144 AQNAITAMNGGELLTQTLTVDWA 166
A AI ++G L V+WA
Sbjct: 267 AARAIAGVSGFGYDHLILNVEWA 289
>gi|195352738|ref|XP_002042868.1| GM11591 [Drosophila sechellia]
gi|194126915|gb|EDW48958.1| GM11591 [Drosophila sechellia]
Length = 379
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
Query: 36 PKLKSAITGGAPKKTKG-RGFREEADSERHSRLADRNFESLGTDGGPGPQRSIEGWIILV 94
P L + +T A T+ G A R+S LA + L PG + GW I V
Sbjct: 244 PPLTAYLTPQAAAATRRLAGALPSAGRIRYSPLAG---DLLANSILPGNAMTGSGWCIFV 300
Query: 95 TGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGG 154
+ E +E+ L +FG +G ++++ + D +T KG+ + N++EA AI ++NG
Sbjct: 301 YNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGY 360
Query: 155 ELLTQTLTVDW 165
L + L V +
Sbjct: 361 TLGNRVLQVSF 371
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
SI+G + V+G+ + + DL+ +F +G+I + D +G KG I ++ EA+
Sbjct: 149 SIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAE 208
Query: 146 NAITAMNGGELLTQTLTVDWAFSNGPS 172
AI +NG + F+N PS
Sbjct: 209 RAIQELNGKTPKGYAEPITVKFANNPS 235
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 42/64 (65%)
Query: 103 EDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLT 162
ED + FG++G+++++ L DR TG KG+ +++ + ++A A+ AMNG E+ + +
Sbjct: 309 EDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDATAALKAMNGAEIAGRAIR 368
Query: 163 VDWA 166
VD+A
Sbjct: 369 VDFA 372
>gi|195120095|ref|XP_002004564.1| GI19540 [Drosophila mojavensis]
gi|193909632|gb|EDW08499.1| GI19540 [Drosophila mojavensis]
Length = 669
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + ++ ++ L+ FG++G + ++H+ L R G + G A ++YE +A AI
Sbjct: 46 LIVRNISYKSTDETLREYFGQWGTLEDVHI-LKRGDGKLVGCAFVQYETVNQATKAILKS 104
Query: 152 NGGELLTQTLTVDWAF 167
NG ELL + + VDWA
Sbjct: 105 NGKELLGRKIFVDWAI 120
>gi|349732184|ref|NP_001025498.3| ELAV-like protein 2 [Xenopus (Silurana) tropicalis]
gi|288561906|sp|Q28GD4.2|ELAV2_XENTR RecName: Full=ELAV-like protein 2; AltName: Full=Protein ElrB
Length = 375
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 61 SERHSRLADRNFESLGTDGGPG-PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNL 119
++R SR + + + + G P + GW I V + +A E L +FG +G + N+
Sbjct: 262 AQRFSRFSPMTIDGMTSLAGINFPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNV 321
Query: 120 HLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFS 168
+ D T KG+ + N++EA AI ++NG L + L V + S
Sbjct: 322 KVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTS 370
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +++L+++FG GEI + L D+ TG GY + Y + ++A+ AI +
Sbjct: 69 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 128
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L T+T+ V +A PS+ + N+
Sbjct: 129 NGLRLQTKTIKVSYA---RPSSASIRDANL 155
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V+G+ + + +L+ +F +YG I + +D+ TG +G I ++ EA+ AI +
Sbjct: 155 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 214
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + T + F+N PS +K + +SP RRY
Sbjct: 215 NGQKPPGATEPITVKFANNPS-----QKVNHTILSQLYQSPNRRY 254
>gi|297746000|emb|CBI16056.3| unnamed protein product [Vitis vinifera]
Length = 193
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ +E DL +F +G + +++ +D++TG +G+ + + N E+A+ AI +
Sbjct: 114 VRVTNLSEDTREPDLHELFRTFGPVSRVYVAVDQKTGMSRGFGFVNFVNKEDAERAINKL 173
Query: 152 NGGELLTQTLTVDWA 166
NG L V+WA
Sbjct: 174 NGYGYDNLILRVEWA 188
>gi|149055454|gb|EDM07038.1| rCG38164 [Rattus norvegicus]
Length = 363
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 78 NGREFSGRALRVDNAAS 94
>gi|147765735|emb|CAN73378.1| hypothetical protein VITISV_037535 [Vitis vinifera]
Length = 306
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 46/75 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V+ + E+ E DL+ +F +G++ +++ +D +TG +G+ + + N E+A+ AI+ +
Sbjct: 227 VRVSNLSEDTHEADLRELFSRFGQLTRVYVAIDHKTGLSRGFGYVNFVNREDAERAISKL 286
Query: 152 NGGELLTQTLTVDWA 166
NG + L V+W+
Sbjct: 287 NGYGYDSLILQVEWS 301
>gi|28277433|gb|AAH45277.1| Hug protein [Danio rerio]
Length = 208
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
GW I V + ++A E L +FG +G + N+ + D T KG+ + N+EEA AI
Sbjct: 125 GWCIFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTSKCKGFGFVTMTNYEEAAMAI 184
Query: 149 TAMNGGELLTQTLTVDW 165
+++NG L + L V +
Sbjct: 185 SSLNGYRLGDKVLQVSF 201
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 33/53 (62%)
Query: 103 EDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGE 155
+ +++++F +YG I N + +D+ +G +G A I ++ EA+ AI +NG +
Sbjct: 3 QKNVEDMFTQYGRIINSRILVDQASGLSRGVAFIRFDKRSEAEEAIIDLNGSK 55
>gi|4097873|gb|AAD00176.1| eIF3-p44 [Mus musculus]
Length = 320
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 84 QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEE 143
+R+ + I VT + E+ +E DLQ +F +G I ++L D+ TG KG+A I + E+
Sbjct: 233 RRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRRED 292
Query: 144 AQNAITAMNGGELLTQTLTVDWA 166
A AI ++G L V+WA
Sbjct: 293 AARAIAGVSGFGYDHLILNVEWA 315
>gi|360044342|emb|CCD81889.1| putative rna recognition motif containing protein [Schistosoma
mansoni]
Length = 258
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 89 GWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAI 148
WI V G+H + E D+ VF +YGEI N++L D++TG KG+A + YE+ A
Sbjct: 37 AWI-YVGGLHYDLTEGDVICVFSQYGEIVNINLVRDKKTGVSKGFAFVCYEDQRSTVLAT 95
Query: 149 TAMNGGELLTQTLTVD 164
+NG +L + + VD
Sbjct: 96 DNLNGIKLGGRIIRVD 111
>gi|349804077|gb|AEQ17511.1| putative eukaryotic translation initiation factor 3 subunit g-b
[Hymenochirus curtipes]
Length = 270
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 84 QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEE 143
+R+ + I VT + E+ +E DLQ +F +G I ++L D+ TG KG+A I + E+
Sbjct: 185 RRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRRED 244
Query: 144 AQNAITAMNGGELLTQTLTVDWA 166
A AI ++G L V+WA
Sbjct: 245 AARAIAGVSGFGYDHLILNVEWA 267
>gi|395547925|ref|XP_003775192.1| PREDICTED: cleavage stimulation factor subunit 2 [Sarcophilus
harrisii]
Length = 556
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 94 VTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNG 153
V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +NG
Sbjct: 5 VGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNG 64
Query: 154 GELLTQTLTVDWAFS 168
E + L VD A S
Sbjct: 65 REFSGRALRVDNAAS 79
>gi|345787182|ref|XP_542056.3| PREDICTED: ELAV-like protein 3 [Canis lupus familiaris]
Length = 647
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%)
Query: 90 WIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAIT 149
W I V + EA E L +FG +G + N+ + D T KG+ + N++EA AI
Sbjct: 564 WCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIA 623
Query: 150 AMNGGELLTQTLTVDWAFS 168
++NG L + L V + S
Sbjct: 624 SLNGYRLGERVLQVSFKTS 642
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +D+ +++FG G+I + L D+ TG GY + Y + +A AI +
Sbjct: 328 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 387
Query: 152 NGGELLTQTLTVDWA 166
NG +L T+T+ V +A
Sbjct: 388 NGLKLQTKTIKVSYA 402
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 86 SIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQ 145
SI + V+G+ + + +++ +F +YG I + +D+ TG +G I ++ EA+
Sbjct: 408 SIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAE 467
Query: 146 NAITAMNGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
AI +NG + L + F+N PS +K + TH +S RRY
Sbjct: 468 EAIKGLNGQKPLGAAEPITVKFANNPS-----QKTGQALLTHLYQSSARRY 513
>gi|225434808|ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
[Vitis vinifera]
Length = 296
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ +E DL +F +G + +++ +D++TG +G+ + + N E+A+ AI +
Sbjct: 217 VRVTNLSEDTREPDLHELFRTFGPVSRVYVAVDQKTGMSRGFGFVNFVNKEDAERAINKL 276
Query: 152 NGGELLTQTLTVDWA 166
NG L V+WA
Sbjct: 277 NGYGYDNLILRVEWA 291
>gi|73986818|ref|XP_854113.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G
isoform 1 [Canis lupus familiaris]
Length = 320
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 84 QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEE 143
+R+ + I VT + E+ +E DLQ +F +G I ++L D+ TG KG+A I + E+
Sbjct: 233 RRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRRED 292
Query: 144 AQNAITAMNGGELLTQTLTVDWA 166
A AI ++G L V+WA
Sbjct: 293 AARAIAGVSGFGYDHLILNVEWA 315
>gi|403162308|ref|XP_003890369.1| hypothetical protein PGTG_21014 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172551|gb|EHS64663.1| hypothetical protein PGTG_21014 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1087
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 13/110 (11%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ +T + + QEDDL+ +F ++GEI+ + + LD + G KG+A +E++N E + A +M
Sbjct: 826 LYITCLSKYVQEDDLRKLFSQFGEIKGVRVVLD-QAGHSKGFAFVEFQN-EMSAKAALSM 883
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKN--------MRPGRTHRSRSPR 193
N EL + + V + + G S RKN + HRSRS R
Sbjct: 884 NNVELKKRRIGVTISSAKGLSLA---RKNTTFKDETKLSSATDHRSRSVR 930
>gi|158340910|ref|YP_001522078.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158311151|gb|ABW32764.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 77
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E DL+ F +YG ++ + L +DR TG +G+A +E +N E AI +
Sbjct: 3 IYVGNLSYAVTEKDLKIAFAQYGAVKQVKLPIDRETGKKQGFAFVEMDNDAEEAKAIKKL 62
Query: 152 NGGELLTQTLTVDWA 166
+GGE + +TLT++ A
Sbjct: 63 DGGEWMGKTLTINKA 77
>gi|193598819|ref|XP_001951232.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Acyrthosiphon pisum]
gi|328706164|ref|XP_003243012.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Acyrthosiphon pisum]
Length = 386
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 14 VFVGNIPYEATEEKLKDIFSEVGPVISFKLVYDRETGKPKGYGFCEYKDQETALSAMRNL 73
Query: 152 NGGELLTQTLTVDWAFS 168
NG E+ +TL VD A +
Sbjct: 74 NGYEIGGRTLRVDNACT 90
>gi|395514484|ref|XP_003761447.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Sarcophilus
harrisii]
Length = 347
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 61 SERHSRLADRNFESLGTDGGPG-PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNL 119
++R SR + + + + G P + GW I V + +A E L +FG +G + N+
Sbjct: 234 AQRFSRFSPMTIDGMTSLAGINIPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNV 293
Query: 120 HLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDW 165
+ D T KG+ + N++EA AI ++NG L + L V +
Sbjct: 294 KVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 339
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +++L+++FG GEI + L D+ TG GY + Y + ++A+ AI +
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L T+T+ V +A PS+ + N+
Sbjct: 101 NGLRLQTKTIKVSYA---RPSSASIRDANL 127
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V+G+ + + +L+ +F +YG I + +D+ TG +G I ++ EA+ AI +
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 186
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + + T + F+N PS +K + + +SP RRY
Sbjct: 187 NGQKPPSATEPITVKFANNPS-----QKTNQAILSQLYQSPNRRY 226
>gi|348550182|ref|XP_003460911.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-like [Cavia porcellus]
Length = 367
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I VT + E+ +E DLQ +F +G I ++L D+ TG KG+A I + E+A AI +
Sbjct: 241 IRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGV 300
Query: 152 NGGELLTQTLTVDWA 166
+G L V+WA
Sbjct: 301 SGFGYDHLILNVEWA 315
>gi|348515337|ref|XP_003445196.1| PREDICTED: cleavage stimulation factor subunit 2-like [Oreochromis
niloticus]
Length = 478
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+++F E G + + L DR TG KGY EY++ E A +A+ +
Sbjct: 31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 90
Query: 152 NGGELLTQTLTVDWAFS 168
NG E + L VD A S
Sbjct: 91 NGREFSGRALRVDNAAS 107
>gi|225440472|ref|XP_002272361.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G
isoform 1 [Vitis vinifera]
Length = 293
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 46/75 (61%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V+ + E+ E DL+ +F +G++ +++ +D +TG +G+ + + N E+A+ AI+ +
Sbjct: 214 VRVSNLSEDTHEADLRELFSRFGQLTRVYVAIDHKTGLSRGFGYVNFVNREDAERAISKL 273
Query: 152 NGGELLTQTLTVDWA 166
NG + L V+W+
Sbjct: 274 NGYGYDSLILQVEWS 288
>gi|443916812|gb|ELU37760.1| RNA-binding protein Cwf29 [Rhizoctonia solani AG-1 IA]
Length = 933
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ + G+H + E D+ +F +YGEI +++L D+ TG +G+ + YE+ A+ +
Sbjct: 34 VFIGGLHVDMTEGDVITIFSQYGEIMDVNLPRDKTTGKQRGFGFLMYEDQRSTVLAVDNL 93
Query: 152 NGGELLTQTLTVD 164
NG ++L +TL VD
Sbjct: 94 NGAQVLGRTLRVD 106
>gi|172036857|ref|YP_001803358.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354554661|ref|ZP_08973965.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171698311|gb|ACB51292.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353553470|gb|EHC22862.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 81
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
I V + E E DL VF +YG ++ +H+ DR TG +G+A +E E NAI +
Sbjct: 3 IYVGNLPYEVTEADLNFVFSDYGSVKRVHVPTDRDTGRPRGFAFVELEQKANETNAIETL 62
Query: 152 NGGELLTQTLTVDWA 166
+G E + +T+ VD A
Sbjct: 63 DGAEWMGRTMKVDEA 77
>gi|444525515|gb|ELV14062.1| Eukaryotic translation initiation factor 3 subunit G, partial
[Tupaia chinensis]
Length = 319
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 84 QRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEE 143
+R+ + I VT + E+ +E DLQ +F +G I ++L D+ TG KG+A I + E+
Sbjct: 232 RRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRRED 291
Query: 144 AQNAITAMNGGELLTQTLTVDWA 166
A AI ++G L V+WA
Sbjct: 292 AARAIAGVSGFGYDHLILNVEWA 314
>gi|341891856|gb|EGT47791.1| hypothetical protein CAEBREN_23759 [Caenorhabditis brenneri]
Length = 295
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFV-KGYALIEYENFEEAQNAITA 150
+++ + + L+ +F YG I+N+ L DR + +GY ++YEN E+A+ +I
Sbjct: 142 VVIRNLSKNIVRAHLEEIFSIYGAIKNVDLPPDRNHNHLHRGYGYVDYENVEDAEKSIKY 201
Query: 151 MNGGELLTQTLTVDWAFS-NGP----STGPFKRKNMRPGRTHRS-------RSPRRR 195
M+GG++ TL V+ P PF+R+ P R +S RSP RR
Sbjct: 202 MDGGQVDGMTLQVEMTVGRQAPLQNRRMSPFRRRGSPPQRDRKSPIRRGGNRSPPRR 258
>gi|195395200|ref|XP_002056224.1| GJ10336 [Drosophila virilis]
gi|194142933|gb|EDW59336.1| GJ10336 [Drosophila virilis]
Length = 427
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V + EA E+ L+ +F E G + +L L DR +G KG+ EY++ E A +A+ +
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 152 NGGELLTQTLTVDWAFS 168
NG E+ +TL VD A +
Sbjct: 78 NGYEIGGRTLRVDNACT 94
>gi|12407751|gb|AAG53636.1|AF291712_1 initiation factor 3g [Arabidopsis thaliana]
gi|21593472|gb|AAM65439.1| putative eukaryotic translation initiation factor 3 subunit
[Arabidopsis thaliana]
Length = 294
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ +E DL +F +G + +++ +D++TG +G+ + + + E+AQ AI +
Sbjct: 215 VRVTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKL 274
Query: 152 NGGELLTQTLTVDWA 166
NG L V+WA
Sbjct: 275 NGYGYDNLILRVEWA 289
>gi|388519919|gb|AFK48021.1| unknown [Medicago truncatula]
Length = 281
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%)
Query: 79 GGPGPQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEY 138
G GP + + +LV V DDL +F +YG++ ++ + DRRTG +G+A + Y
Sbjct: 5 GRSGPPDISDTYSLLVLNVTFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRY 64
Query: 139 ENFEEAQNAITAMNGGELLTQTLTVDWA 166
+ +EA A+ ++G + + +TV +A
Sbjct: 65 KYADEASKAVDRLDGRMVDGREITVQFA 92
>gi|297829692|ref|XP_002882728.1| initiation factor 3g [Arabidopsis lyrata subsp. lyrata]
gi|297328568|gb|EFH58987.1| initiation factor 3g [Arabidopsis lyrata subsp. lyrata]
Length = 295
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ +E DL +F +G + +++ +D++TG +G+ + + + E+AQ AI +
Sbjct: 216 VRVTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKL 275
Query: 152 NGGELLTQTLTVDWA 166
NG L V+WA
Sbjct: 276 NGYGYDNLILRVEWA 290
>gi|225449382|ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
[Vitis vinifera]
Length = 301
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ VT + E+ +E DL +F +G + +++ +D++TG +G+ + + N E+A+ AI +
Sbjct: 222 VRVTNLSEDTREPDLHELFRTFGPVSRVYVAIDQKTGMSRGFGFVNFVNKEDAERAINKL 281
Query: 152 NGGELLTQTLTVDWA 166
NG L V+WA
Sbjct: 282 NGYGYDNLILRVEWA 296
>gi|117557982|gb|AAI27339.1| ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B)
[Xenopus (Silurana) tropicalis]
Length = 346
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 61 SERHSRLADRNFESLGTDGGPG-PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNL 119
++R SR + + + + G P + GW I V + +A E L +FG +G + N+
Sbjct: 233 AQRFSRFSPMTIDGMTSLAGINFPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNV 292
Query: 120 HLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFS 168
+ D T KG+ + N++EA AI ++NG L + L V + S
Sbjct: 293 KVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTS 341
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
++V + + +++L+++FG GEI + L D+ TG GY + Y + ++A+ AI +
Sbjct: 40 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 99
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNM 181
NG L T+T+ V +A PS+ + N+
Sbjct: 100 NGLRLQTKTIKVSYA---RPSSASIRDANL 126
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 92 ILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAM 151
+ V+G+ + + +L+ +F +YG I + +D+ TG +G I ++ EA+ AI +
Sbjct: 126 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 185
Query: 152 NGGELLTQTLTVDWAFSNGPSTGPFKRKNMRPGRTHRSRSPRRRY 196
NG + T + F+N PS +K + +SP RRY
Sbjct: 186 NGQKPPGATEPITVKFANNPS-----QKVNHTILSQLYQSPNRRY 225
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.133 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,469,913,224
Number of Sequences: 23463169
Number of extensions: 154543436
Number of successful extensions: 376273
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 12234
Number of HSP's successfully gapped in prelim test: 5564
Number of HSP's that attempted gapping in prelim test: 351949
Number of HSP's gapped (non-prelim): 28028
length of query: 196
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 61
effective length of database: 9,191,667,552
effective search space: 560691720672
effective search space used: 560691720672
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 73 (32.7 bits)