BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043067
(122 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana
GN=AGL16 PE=1 SV=1
Length = 240
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 100/124 (80%), Gaps = 2/124 (1%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
MMGEELSGLSV+ LQNLENQLE+SLRGVRMKKDQ+L++EIQ L+R+GNL+HQEN++L+KK
Sbjct: 110 MMGEELSGLSVEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKK 169
Query: 61 VNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQ--HETPAR 118
VNL+ Q+NMEL+ KV + +N+N L TN + + + S+ V LQLSQPQ HET ++
Sbjct: 170 VNLMHQQNMELHEKVSEVEGVKIANKNSLLTNGLDMRDTSNEHVHLQLSQPQHDHETHSK 229
Query: 119 ATKL 122
A +L
Sbjct: 230 AIQL 233
>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica
GN=MADS27 PE=2 SV=2
Length = 240
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
+MGE+LSGL+VK+LQ+LENQLE+SLR VR KKD +L+DEI EL+RKG+L+HQEN+ELYKK
Sbjct: 110 LMGEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKK 169
Query: 61 VNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQ-PQHETPARA 119
++LIRQEN ELY K+Y T + NR+ N + E +++PV+L LS PQH ++
Sbjct: 170 ISLIRQENAELYKKIYETEGPSEVNRDSPTPYNFAVIEKTNVPVQLGLSTLPQHSDAEQS 229
Query: 120 T 120
T
Sbjct: 230 T 230
>sp|Q38840|AGL17_ARATH Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana
GN=AGL17 PE=2 SV=2
Length = 227
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 85/112 (75%), Gaps = 4/112 (3%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
+ G EL+GLSVK+LQN+E+QLEMSLRG+RMK++QIL +EI+EL+RK NL+H EN+EL +K
Sbjct: 110 LTGVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRK 169
Query: 61 VNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQ 112
V I QEN+ELY K YGT + NG + L + +SH VRLQLSQP+
Sbjct: 170 VQRIHQENVELYKKAYGTSNTNGLGHHEL----VDAVYESHAQVRLQLSQPE 217
>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana
GN=AGL21 PE=1 SV=1
Length = 228
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 89/123 (72%), Gaps = 10/123 (8%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
MMGE+L+GLSV +L +LENQ+E+SLRG+RM+K+Q+L EIQELS+K NLIHQEN++L +K
Sbjct: 110 MMGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRK 169
Query: 61 VNLIRQENMELYTKVYGTRDLNGSNRNPLHTNNIGIGED-SHIPVRLQLSQPQH---ETP 116
V I QEN+ELY K Y +N N + + +D SH +RLQLSQP+H +TP
Sbjct: 170 VQRIHQENVELYKKAY------MANTNGFTHREVAVADDESHTQIRLQLSQPEHSDYDTP 223
Query: 117 ARA 119
RA
Sbjct: 224 PRA 226
>sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica
GN=MADS57 PE=2 SV=2
Length = 241
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 82/118 (69%), Gaps = 8/118 (6%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
+MGEELSGL V+DLQ LEN+LE+SLR +RM+KD +L EI+EL KG+LIHQEN+EL +
Sbjct: 109 LMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSRS 168
Query: 61 VNLIRQENMELYTKV-----YGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQH 113
+N++ Q+ +ELY K+ G D N S+ P + I +++++P L+LSQ Q
Sbjct: 169 LNVMSQQKLELYNKLQACEQRGATDANESSSTPY---SFRIIQNANMPPSLELSQSQQ 223
>sp|Q9SI38|ANR1_ARATH MADS-box transcription factor ANR1 OS=Arabidopsis thaliana GN=ANR1
PE=1 SV=1
Length = 234
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 86/124 (69%), Gaps = 7/124 (5%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
++GEELSG++ DLQNLE+QL SL+GVR+KKDQ++ +EI+EL+RKG +I +EN EL
Sbjct: 111 LVGEELSGMNANDLQNLEDQLVTSLKGVRLKKDQLMTNEIRELNRKGQIIQKENHELQNI 170
Query: 61 VNLIRQENMELYTKVYG-TRDLNG-SNRNPLHTNNIGIGEDSHIPVRLQLSQPQHETPAR 118
V+++R+EN++L KV+G T + G S+ +P+ G ++ P +LQL Q Q +
Sbjct: 171 VDIMRKENIKLQKKVHGRTNAIEGNSSVDPISN-----GTTTYAPPQLQLIQLQPAPREK 225
Query: 119 ATKL 122
+ +L
Sbjct: 226 SIRL 229
>sp|Q84NC5|MAD25_ORYSJ MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica
GN=MADS25 PE=2 SV=2
Length = 227
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 78/119 (65%), Gaps = 8/119 (6%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
++GEE+S +V+DLQ L+NQ+EMSL +R KKDQ+L +EI +L+ KG+L+ +EN EL KK
Sbjct: 110 LLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRKK 169
Query: 61 VNLIRQENMELYTKV-----YGTRDLNGSNRNPLHTNNIGIGEDSHIPVRLQLSQPQHE 114
N+ Q N+EL+ K+ + + S+++P ++ DS + + L+LSQ + E
Sbjct: 170 FNIAHQRNIELHKKLNSGESTSSEQVTRSSKDPGESST---PRDSRVCIDLELSQKEVE 225
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica
GN=MADS23 PE=2 SV=1
Length = 159
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 43/46 (93%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRK 46
++G++LSGL V+DLQNLE++LEMSL+ +R++KD ++MD+IQELSRK
Sbjct: 110 LLGQQLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRK 155
>sp|Q9XJ66|MAD22_ORYSJ MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica
GN=MADS22 PE=2 SV=1
Length = 228
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
M GEEL GLS+ +LQ LE LE L V + KDQ M++I EL RK + + +EN++L +
Sbjct: 110 MRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQ 169
Query: 61 VNLI 64
V+ I
Sbjct: 170 VSQI 173
>sp|D7KQR8|CAL_ARALL Transcription factor CAULIFLOWER OS=Arabidopsis lyrata subsp.
lyrata GN=CAL PE=3 SV=1
Length = 256
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 43/60 (71%)
Query: 2 MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
+GE+L +S+KDLQNLE QLE +L+ +R +K+Q++ + + L RK N I +EN L K++
Sbjct: 115 LGEDLEPMSLKDLQNLEQQLETALKHIRSRKNQLMYESLNHLQRKENEIQEENSMLTKQI 174
>sp|Q0DEB8|MADS5_ORYSJ MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica
GN=MADS5 PE=1 SV=1
Length = 225
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
++GE+L LS+K+L+ LENQ+E+SL +R K+Q L+D++ EL RK + N +L +K
Sbjct: 113 LLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRK 172
Query: 61 VNLIRQENM 69
+ ENM
Sbjct: 173 IQETSGENM 181
>sp|A2Y9P0|MADS5_ORYSI MADS-box transcription factor 5 OS=Oryza sativa subsp. indica
GN=MADS5 PE=2 SV=1
Length = 225
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
++GE+L LS+K+L+ LENQ+E+SL +R K+Q L+D++ EL RK + N +L +K
Sbjct: 113 LLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRK 172
Query: 61 VNLIRQENM 69
+ ENM
Sbjct: 173 IQETSGENM 181
>sp|Q8GTF5|AP1A_BRAOB Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
botrytis GN=AP1A PE=2 SV=1
Length = 256
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 42/60 (70%)
Query: 2 MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
+GE+L +S K+LQNLE QL+ +L+ +R +K+Q++ D I EL RK I ++N L K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSINELQRKEKAIQEQNSMLSKQI 172
>sp|B4YPW6|AP1A_BRAOA Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
alboglabra GN=AP1A PE=3 SV=1
Length = 256
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 42/60 (70%)
Query: 2 MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
+GE+L +S K+LQNLE QL+ +L+ +R +K+Q++ D I EL RK I ++N L K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSINELQRKEKAIQEQNSMLSKQI 172
>sp|Q96356|2AP1_BRAOT Floral homeotic protein APETALA 1-2 OS=Brassica oleracea var.
italica GN=2AP1 PE=2 SV=1
Length = 256
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 42/60 (70%)
Query: 2 MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
+GE+L +S K+LQNLE QL+ +L+ +R +K+Q++ D I EL RK I ++N L K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSINELQRKEKAIQEQNSMLSKQI 172
>sp|A2IB53|AP1_CITSI Floral homeotic protein APETALA 1 OS=Citrus sinensis GN=AP1 PE=2
SV=1
Length = 256
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 43/60 (71%)
Query: 2 MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
+GE+L +S K+LQNLE QL+ +L+ +R +K+Q++ + I EL +K I ++N L+K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLFKQI 172
>sp|Q41276|AP1_SINAL Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1
Length = 254
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 42/60 (70%)
Query: 2 MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
+GE+L +S K+LQNLE QL+ +L+ +R +K+Q++ D I EL RK I ++N L K++
Sbjct: 113 LGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQI 172
>sp|Q39081|CAL_ARATH Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL
PE=1 SV=3
Length = 255
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 2 MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
+GEEL +S+KDLQNLE QLE +L+ +R +K+Q++ + + L RK I +EN L K++
Sbjct: 115 LGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQI 174
Query: 62 NLIRQENMELYTKVYGTRDLNGS 84
+EN+ L TK LN S
Sbjct: 175 K--ERENI-LRTKQTQCEQLNRS 194
>sp|P0DI14|AP1_BRARP Floral homeotic protein APETALA 1 OS=Brassica rapa subsp.
pekinensis GN=AP1 PE=3 SV=1
Length = 256
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%)
Query: 2 MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
+GE+L +S K+LQNLE QL+ +L+ +R +K+Q++ D + EL RK I ++N L K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQI 172
>sp|Q69TG5|MAD55_ORYSJ MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica
GN=MADS55 PE=2 SV=2
Length = 245
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 37/57 (64%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVEL 57
M GEEL GLSV++LQ +E LE L+ V KDQ M EI EL RKG + +EN+ L
Sbjct: 133 MRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRL 189
>sp|Q8GTF4|AP1C_BRAOB Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
botrytis GN=AP1C PE=2 SV=1
Length = 256
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%)
Query: 2 MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
+GE+L +S K+LQNLE QL+ +L+ +R +K+Q++ D + EL RK I ++N L K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQI 172
>sp|B4YPV4|AP1C_BRAOA Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
alboglabra GN=AP1C PE=3 SV=1
Length = 256
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%)
Query: 2 MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
+GE+L +S K+LQNLE QL+ +L+ +R +K+Q++ D + EL RK I ++N L K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQI 172
>sp|Q96355|1AP1_BRAOT Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var.
italica GN=1AP1 PE=2 SV=1
Length = 256
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%)
Query: 2 MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
+GE+L +S K+LQNLE QL+ +L+ +R +K+Q++ D + EL RK I ++N L K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQI 172
>sp|D7KWY6|AP1_ARALL Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp.
lyrata GN=AP1 PE=3 SV=1
Length = 256
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%)
Query: 2 MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
+GE+L+ +S K+LQNLE QL+ +L+ +R +K+Q++ + I EL RK I ++N L K++
Sbjct: 113 LGEDLNAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQRKEKAIQEQNSMLSKQI 172
>sp|Q39371|3AP1_BRAOL Floral homeotic protein APETALA 1 OS=Brassica oleracea GN=AP1 PE=2
SV=1
Length = 256
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%)
Query: 2 MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
+GE+L +S K+LQNLE QL+ +L+ +R +K+Q++ + I EL RK I ++N L K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYESINELQRKEKAIQEQNSMLSKQI 172
>sp|Q0D4T4|MAD18_ORYSJ MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica
GN=MADS18 PE=1 SV=1
Length = 249
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRK-GNLIHQENV 55
++GE+L L++K+LQ LE+QLE SL+ +R KK+Q+L + I EL +K +L +Q NV
Sbjct: 112 LLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNV 167
>sp|A2YNI2|MAD18_ORYSI MADS-box transcription factor 18 OS=Oryza sativa subsp. indica
GN=MADS18 PE=2 SV=2
Length = 249
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRK-GNLIHQENV 55
++GE+L L++K+LQ LE+QLE SL+ +R KK+Q+L + I EL +K +L +Q NV
Sbjct: 112 LLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNV 167
>sp|Q10PZ9|MADS1_ORYSJ MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica
GN=MADS1 PE=1 SV=1
Length = 257
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 47/69 (68%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
++GE+L LS+K+L+ LENQ+E+SL+ +R +K+Q L+D++ +L K + N +L KK
Sbjct: 109 ILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKK 168
Query: 61 VNLIRQENM 69
+ EN+
Sbjct: 169 LQETSAENV 177
>sp|A2XDY1|MADS1_ORYSI MADS-box transcription factor 1 OS=Oryza sativa subsp. indica
GN=MADS1 PE=2 SV=2
Length = 257
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 47/69 (68%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
++GE+L LS+K+L+ LENQ+E+SL+ +R +K+Q L+D++ +L K + N +L KK
Sbjct: 109 ILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKK 168
Query: 61 VNLIRQENM 69
+ EN+
Sbjct: 169 LQETSAENV 177
>sp|P35631|AP1_ARATH Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1
PE=1 SV=2
Length = 256
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 42/60 (70%)
Query: 2 MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
+GE+L +S K+LQNLE QL+ +L+ +R +K+Q++ + I EL +K I ++N L K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQI 172
>sp|Q7XUN2|MAD17_ORYSJ MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica
GN=MADS17 PE=1 SV=2
Length = 249
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
M+GE+L LS+K+LQ LE QLE SL R +K QI+M+++ +L RK + + N +L K
Sbjct: 112 MLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNK 171
Query: 61 V 61
+
Sbjct: 172 L 172
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 43/63 (68%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
++GE+L LSVK+LQ LE QLE +L R +K Q++M++++EL RK + + N +L K
Sbjct: 110 LLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHK 169
Query: 61 VNL 63
+ +
Sbjct: 170 LEV 172
>sp|Q39375|CAL_BRAOT Transcription factor CAULIFLOWER OS=Brassica oleracea var. italica
GN=CAL PE=2 SV=1
Length = 251
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%)
Query: 2 MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
+GE+L +S+K+LQNLE QL+ SL+ +R +K+Q++ + + L RK I +EN L K++
Sbjct: 115 LGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLAKQI 174
>sp|Q40170|AGL8_SOLLC Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum
GN=TDR4 PE=2 SV=1
Length = 227
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 44/60 (73%)
Query: 2 MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
+GE+L LS+K+LQNLE+QL+ +L+ +R +K+Q++ + I L +K + ++N +L KKV
Sbjct: 113 VGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQLSKKV 172
>sp|Q9SBK9|CAL_BRARP Transcription factor CAULIFLOWER OS=Brassica rapa subsp. pekinensis
GN=CAL PE=2 SV=1
Length = 254
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%)
Query: 2 MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
+GE+L +S+K+LQNLE QL+ SL+ +R +K+Q++ + + L RK I +EN L K++
Sbjct: 115 LGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLTKQI 174
>sp|Q6R4S6|CAL_BRARC Transcription factor CAULIFLOWER OS=Brassica rapa subsp. chinensis
GN=CAL PE=2 SV=1
Length = 254
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%)
Query: 2 MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
+GE+L +S+K+LQNLE QL+ SL+ +R +K+Q++ + + L RK I +EN L K++
Sbjct: 115 LGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLTKQI 174
>sp|Q6R4S3|CAL_BRARA Transcription factor CAULIFLOWER OS=Brassica rapa GN=CAL PE=2 SV=1
Length = 254
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%)
Query: 2 MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
+GE+L +S+K+LQNLE QL+ SL+ +R +K+Q++ + + L RK I +EN L K++
Sbjct: 115 LGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLTKQI 174
>sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8
PE=1 SV=1
Length = 242
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
MGE+L LS+K+LQ+LE+QL+ +++ +R +K+Q + + I L +K + N L KK
Sbjct: 112 FMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKK 171
Query: 61 V 61
+
Sbjct: 172 I 172
>sp|Q41274|AGL8_SINAL Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8
PE=2 SV=1
Length = 241
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
MGE+L LS+K+LQ+LE+QL +++ +R +K+Q + + I L +K ++ N L KK
Sbjct: 112 FMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKK 171
Query: 61 V 61
+
Sbjct: 172 I 172
>sp|Q38837|AGL13_ARATH Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana
GN=AGL13 PE=2 SV=2
Length = 244
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 36/46 (78%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRK 46
++GE+L G+S+K+LQ LE QLE +L R +K Q++M++++EL RK
Sbjct: 109 LVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRK 154
>sp|O65874|MTF1_PEA MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1
Length = 247
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 42/61 (68%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
+MGE+L LS KDL+ LE QL+ SL+ +R + Q ++D++ +L RK +L+ + N L ++
Sbjct: 115 LMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQR 174
Query: 61 V 61
+
Sbjct: 175 M 175
>sp|Q03489|AGL9_PETHY Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida
GN=FBP2 PE=1 SV=2
Length = 241
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 46/61 (75%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
++GE+L L+ K+L++LE QL+MSL+ +R + Q+++D++Q+L RK + +++ N L ++
Sbjct: 113 LLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQR 172
Query: 61 V 61
+
Sbjct: 173 L 173
>sp|Q8VWM8|M17_MAIZE MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1
Length = 259
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%)
Query: 3 GEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKVN 62
G++LS L++ D+ +LE QLE S+ VR +K Q+L ++ L RK ++ +N LY+ +N
Sbjct: 111 GDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRKEQILEDQNTFLYRMIN 170
>sp|Q42429|AGL8_SOLTU Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum
PE=2 SV=1
Length = 250
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 44/60 (73%)
Query: 2 MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
+GE+L L++K+LQNLE+QL+ +L+ +R +K+Q++ + I L ++ + ++N +L KKV
Sbjct: 113 VGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKV 172
>sp|Q0J466|MADS7_ORYSJ MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica
GN=MADS7 PE=1 SV=2
Length = 249
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 42/61 (68%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
++GE+L L +K+L++LE QL+ SL+ VR + + L+D++ EL RK ++ + N L +K
Sbjct: 114 LLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRK 173
Query: 61 V 61
+
Sbjct: 174 L 174
>sp|P0C5B0|MADS7_ORYSI MADS-box transcription factor 7 OS=Oryza sativa subsp. indica
GN=MADS7 PE=2 SV=2
Length = 249
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 42/61 (68%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
++GE+L L +K+L++LE QL+ SL+ VR + + L+D++ EL RK ++ + N L +K
Sbjct: 114 LLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRK 173
Query: 61 V 61
+
Sbjct: 174 L 174
>sp|Q6Q9H6|MAD34_ORYSJ MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica
GN=MADS34 PE=2 SV=2
Length = 239
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 44/64 (68%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
++GE+L+ L+ +L+ LE+Q+ +L+ +R +K Q+L+DE+ +L RK ++ N L +K
Sbjct: 112 LLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRK 171
Query: 61 VNLI 64
++ I
Sbjct: 172 LDEI 175
>sp|O22328|AGL8_SOLCO Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii
GN=SCM1 PE=2 SV=1
Length = 250
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 43/60 (71%)
Query: 2 MGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKKV 61
+GE+L L++K+LQNLE+QL +L+ +R +K+Q++ + I L ++ + ++N +L KKV
Sbjct: 113 VGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKV 172
>sp|Q43585|AG_TOBAC Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2
SV=1
Length = 248
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 40/61 (65%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
M+GE L+ LS++DL+NLE ++E + +R KK+++L EI+ + ++ +H N L K
Sbjct: 127 MLGESLAALSLRDLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLRAK 186
Query: 61 V 61
+
Sbjct: 187 I 187
>sp|Q40872|AG_PANGI Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1
Length = 242
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 1 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILMDEIQELSRKGNLIHQENVELYKK 60
MMGE L L+V+DL+ LE +LE + +R KK+++L EI+ + +K +H N L K
Sbjct: 127 MMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAK 186
Query: 61 V 61
+
Sbjct: 187 I 187
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.132 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,390,373
Number of Sequences: 539616
Number of extensions: 1699141
Number of successful extensions: 4955
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 4776
Number of HSP's gapped (non-prelim): 248
length of query: 122
length of database: 191,569,459
effective HSP length: 89
effective length of query: 33
effective length of database: 143,543,635
effective search space: 4736939955
effective search space used: 4736939955
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)